RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MERTK (Homo sapiens)

Ensembl gene IDs: ENSG00000153208

Ensembl transcript IDs: ENST00000295408.9, ENST00000409780.5, ENST00000421804.6, ENST00000439966.5, ENST00000449344.2, ENST00000616902.4

Found 589 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCCTTGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTaGAGACCGCCATCTCCGTCAGGCCTGGAACAGTTAGCACGGAGG +
Preference number: 1 (lower is better)
Translates to: LPWTRSALCHCGPHN*RPPSPSGLEQLARR
Trigger: CCTCCGTGCTAACTGTTCCAGGCCTGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR TCA 90 bp CTGGTGACGGCTGCAATCCTCACTGTGCACGTAGCATTGTGGACTTaGACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCC +
Preference number: 1 (lower is better)
Translates to: LVTAAILTVHVALWT*TEIRARLPFWPTSS
Trigger: GGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTCCACAATGCTACGTGCACAGTGAGGATTGCAGCCGTCACCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 90 bp GGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTaGAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTC +
Preference number: 1 (lower is better)
Translates to: GQSNCPKDQALREFL*KGHKAAADHCLSSL
Trigger: GAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR TCA 90 bp GCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTACCCAACCGTGTGCAGGGATAAATAT +
Preference number: 1 (lower is better)
Translates to: AKDDEHRICVARRRS*RGGIIYPTVCRDKY
Trigger: ATATTTATCCCTGCACACGGTTGGGTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 90 bp TTTCACTGGATCACTGAAGGGCCCAACTCCCCCTCTGGTGACGGCTaGAATCCTCACTGTGCACGTAGCATTGTGGACTTGAACAGAGAT +
Preference number: 1 (lower is better)
Translates to: FHWITEGPNSPSGDG*NPHCARSIVDLNRD
Trigger: ATCTCTGTTCAAGTCCACAATGCTACGTGCACAGTGAGGATTGCAGCCGTCACCAGAGGGGGAGTTGGGCCCTTCAGTGATCCAGTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 90 bp GGAGTATCCATCAAAACCAGGAACCCAGGAGATCAGAATGCTGTGTaGAGTGCTGTTACGGATGCTGACTTCAGTTGGTGGGGAGGGAAT +
Preference number: 1 (lower is better)
Translates to: GVSIKTRNPGDQNAV*SAVTDADFSWWGGN
Trigger: ATTCCCTCCCCACCAACTGAAGTCAGCATCCGTAACAGCACTGCACACAGCATTCTGATCTCCTGGGTTCCTGGTTTTGATGGATACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 90 bp GGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACAAGGCCGCTaGCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCT +
Preference number: 1 (lower is better)
Translates to: GPGIKGIPLQRPQGR*RPLSFKSQVSSTYP
Trigger: AGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR CCA 90 bp GAGCTCATTTCTATACACACACCTAGAAGTCGAATGACATTTGGGTaGCTGAAGTCTTTCATGCACGCTGCCTCACTGAGAAACTCCTCG +
Preference number: 1 (lower is better)
Translates to: ELISIHTPRSRMTFG*LKSFMHAASLRNSS
Trigger: CGAGGAGTTTCTCAGTGAGGCAGCGTGCATGAAAGACTTCAGCCACCCAAATGTCATTCGACTTCTAGGTGTGTGTATAGAAATGAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 90 bp ACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAATaGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCT +
Preference number: 1 (lower is better)
Translates to: TLVWFFHISIKQCQE*SEQLPQGPGIKGIP
Trigger: AGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR TCA 90 bp GTCATGTCATCTCGCAACATGCAGTTTCGAGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTCAGATACTCCATTCCCAGGGCAATA +
Preference number: 1 (lower is better)
Translates to: VMSSRNMQFRAAKSR*RKFLLLRYSIPRAI
Trigger: TATTGCCCTGGGAATGGAGTATCTGAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGCTCGAAACTGCATGTTGCGAGATGACATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 90 bp TATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATaGCAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAG +
Preference number: 1 (lower is better)
Translates to: YLQTLVWFFHISIKQ*QEWSEQLPQGPGIK
Trigger: CTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR CCA 90 bp AACTTTCTAAGAGTTTTTCTAGCTGCAGCCTCAATACTGAAAAGGTaGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTT +
Preference number: 1 (lower is better)
Translates to: NFLRVFLAAASILKR*GGLRDRFSSKSTLF
Trigger: AAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCACCTTTTCAGTATTGAGGCTGCAGCTAGAAAAACTCTTAGAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR TCA 90 bp CCGTATTTCATGAAGGGTAAAATTACCATGGGCTTTGGGATGCCTTaGGAGCTCATTTCTATACACACACCTAGAAGTCGAATGACATTT +
Preference number: 1 (lower is better)
Translates to: PYFMKGKITMGFGMP*ELISIHTPRSRMTF
Trigger: AAATGTCATTCGACTTCTAGGTGTGTGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATTTTACCCTTCATGAAATACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 90 bp GTTCACTTGGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTaGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAATGTC +
Preference number: 1 (lower is better)
Translates to: VHLVRKTNTKNIRYN*ILLQQKNWLDFWNV
Trigger: GACATTCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACCAAGTGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
3UTR-3UTR TCA 90 bp GCAATGAGCTTCCCAAGGGCAGCATGCTCGAATGGGACCAGGAGACCCCATTCCCAACTCCCCCTCTGGTaGCGGCTGCAATCCTCACTG +
Preference number: 2 (lower is better)
Translates to: AMSFPRAACSNGTRRPHSQLPLW*RLQSSL
Trigger: CAGTGAGGATTGCAGCCGTCACCAGAGGGGGAGTTG...GGAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCCCTTGGGAAGCTCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp CTCCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGTGCACGCTGCCTCACTaGGAAACTCCTCGATCTCCC +
Preference number: 2 (lower is better)
Translates to: LPAPLLTSGLLSLLRSRQCTLPH*ETPRSP
Trigger: GGGAGATCGAGGAGTTTCTCAGTGAGGCAGCGTGCA...CTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp CTCCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGGATGTTCAAGTCCAGTaGAGCAAGGGTGGAGCCCTG +
Preference number: 2 (lower is better)
Translates to: LPAPLLTSGLLSLLRSRQDVQVQ*SKGGAL
Trigger: CAGGGCTCCACCCTTGCTCCACTGGACTTGAACATC...CTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 90 bp TTGATGTTGATCTGCACTCCCTTGGACACGGTCAGCCCTTTGTCATaGTGGGCCTCACAACTGAAGACCGCCATCTCCGTCAGGCCTGGA +
Preference number: 2 (lower is better)
Translates to: LMLICTPLDTVSPLS*WASQLKTAISVRPG
Trigger: TCCAGGCCTGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAACATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 90 bp TCTGGTGACGGCTGCAATCCTCACTGTGCACGTAGCATTGTGGACTaGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTC +
Preference number: 2 (lower is better)
Translates to: SGDGCNPHCARSIVD*NRDPSSAAILANFL
Trigger: GAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTCCACAATGCTACGTGCACAGTGAGGATTGCAGCCGTCACCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTGGCGGGCCCACAGCCTaGCAGGTGAGGTTGAAGGCT +
Preference number: 2 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVGGPTA*QVRLKA
Trigger: AGCCTTCAACCTCACCTGTCAGGCTGTGGGCCCGCC...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACTGTGGGCCTCACAACTaGAGACCGCCATCTCCGTCA +
Preference number: 2 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHCGPHN*RPPSPS
Trigger: TGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACA...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp AGCATGCTCGAATGGGACCAGGAGACCCCATTCCTAACAAGTCTCTCCCCCGGTCCTCCAAGAGCTCTTTaGAAATCCCTGCACTCTGCC +
Preference number: 2 (lower is better)
Translates to: SMLEWDQETPFLTSLSPGPPRAL*KSLHSA
Trigger: GGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGG...ACCGGGGGAGAGACTTGTTAGGAATGGGGTCTCCTGGTCCCATTCGAGCATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp GCAATGAGCTTCCCAAGGGCAGCATGCTCGAATGGGACCAGGAGACCCCATTCCTCAATACTGAAAAGGTaGGGCGGTCTAAGGGATCGG +
Preference number: 2 (lower is better)
Translates to: AMSFPRAACSNGTRRPHSSILKR*GGLRDR
Trigger: CCGATCCCTTAGACCGCCCCACCTTTTCAGTATTGA...GGAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCCCTTGGGAAGCTCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp CTGAATGCTGCAATTCCTGAACGGGGAGTATCCATCAAAACCAGGAACCCAGGAGAACCCAGAAAATGTTaGCGGGCTCAGGCGGGCCCA +
Preference number: 2 (lower is better)
Translates to: LNAAIPERGVSIKTRNPGEPRKC*RAQAGP
Trigger: TGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTC...TCCTGGGTTCCTGGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 90 bp TGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTaGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCT +
Preference number: 2 (lower is better)
Translates to: WSEQLPQGPGIKGIP*QRPQGRCRPLSFKS
Trigger: AGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR CAA 90 bp ATTGCTTTGATGTTGATCTGCACTCCCTTGGACACGGTCAGCCCTTaGTCATTGTGGGCCTCACAACTGAAGACCGCCATCTCCGTCAGG +
Preference number: 2 (lower is better)
Translates to: IALMLICTPLDTVSP*SLWASQLKTAISVR
Trigger: CCTGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAACATCAAAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp GTGCAGGAGGCAATTATAGAGTCAGGGTCGATGTTCAAGTCCAGTGGAGCAAGGTTTTCACTGGATCACTaGAGGGCCCAACTCCCCCTC +
Preference number: 2 (lower is better)
Translates to: VQEAIIESGSMFKSSGARFSLDH*RAQLPL
Trigger: GAGGGGGAGTTGGGCCCTTCAGTGATCCAGTGAAAA...CCTTGCTCCACTGGACTTGAACATCGACCCTGACTCTATAATTGCCTCCTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 90 bp TCAGTTGGTGGGGAGGGAATTGCTTTGATGTTGATCTGCACTCCCTaGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTGAAG +
Preference number: 2 (lower is better)
Translates to: SVGGEGIALMLICTP*DTVSPLSLWASQLK
Trigger: CTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAACATCAAAGCAATTCCCTCCCCACCAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp GACTTGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGTCAGCTTCCTTGACCTaGATGCTGCAATTCCTGAAC +
Preference number: 2 (lower is better)
Translates to: DLNRDPSSAAILANFLQESASLT*MLQFLN
Trigger: GTTCAGGAATTGCAGCATTCAGGTCAAGGAAGCTGA...CTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTAC +
Preference number: 2 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVARRRS*RGGIIY
Trigger: GTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGC...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp GATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATGCCAGGGCTTGCAGCTaGTTGATTTGGTACAGATGT +
Preference number: 2 (lower is better)
Translates to: DPSSAAILANFLQELFGNARACS*LIWYRC
Trigger: ACATCTGTACCAAATCAAGCAGCTGCAAGCCCTGGC...ATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTGGGCTCCTTCAGTCGTaGTGGCTAGAATCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVGLLQS*WLESKG
Trigger: GCCCTTGGATTCTAGCCAGCACGACTGAAGGAGCCC...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp GATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATAGCCCTTTGTCATTGTaGGCCTCACAACTGAAGACC +
Preference number: 2 (lower is better)
Translates to: DPSSAAILANFLQELFGNSPLSL*ASQLKT
Trigger: GGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCT...ATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGAGGCTGTGTTTCTGGTaGCATTCATGCTCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: ESSANKSSSGNELPKGSMRLCFW*HSCSQA
Trigger: AGCCTGAGAGCATGAATGTCACCAGAAACACAGCCT...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp AGAGTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCTGCTGTTACGGATGCTaGCTTCAGTTGGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: RVVQLHGLHCHFQRGPIFCCYGC*LQLVGR
Trigger: CCTCCCCACCAACTGAAGTCAGCATCCGTAACAGCA...GAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp AGCATGCTCGAATGGGACCAGGAGACCCCATTCCTAACAAGTCTCTCCCCCGGTGAGGTCCCATCTTCCTaGTTAAGATTTCCTTCCATT +
Preference number: 2 (lower is better)
Translates to: SMLEWDQETPFLTSLSPGEVPSS*LRFPSI
Trigger: AATGGAAGGAAATCTTAAGCAGGAAGATGGGACCTC...ACCGGGGGAGAGACTTGTTAGGAATGGGGTCTCCTGGTCCCATTCGAGCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp CCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGCAGAAGAAAATTCCTGTTaGTCAGATACTCCATTCCCA +
Preference number: 2 (lower is better)
Translates to: PRTSPHIRTSEPSEESSAEENSC*SDTPFP
Trigger: TGGGAATGGAGTATCTGAGCAACAGGAATTTTCTTC...TGCTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTAGGCAGTCTTCGGGCTaGTTCAACCTGTGGCCATGG +
Preference number: 2 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVRQSSG*FNLWPW
Trigger: CCATGGCCACAGGTTGAAGCAGCCCGAAGACTGCCT...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp GACTTGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGAATTGGCTTGATTTTTaGAATGTCTCCCCGCACCTC +
Preference number: 2 (lower is better)
Translates to: DLNRDPSSAAILANFLQENWLDF*NVSPHL
Trigger: GAGGTGCGGGGAGACATTCCAAAAATCAAGCCAATT...CTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp GACTTGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGGTTAAAAATCATGACTaGGCCATTACTCAGCGGATC +
Preference number: 2 (lower is better)
Translates to: DLNRDPSSAAILANFLQEVKNHD*AITQRI
Trigger: GATCCGCTGAGTAATGGCTCAGTCATGATTTTTAAC...CTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACAATCCAAGGGCTCACTaGAGACCAGCCTATTTCATT +
Preference number: 2 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHNPRAH*RPAYFI
Trigger: AATGAAATAGGCTGGTCTGCAGTGAGCCCTTGGATT...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAATTCATCTGGTGCTTTaGGGCCATGGAGTTCACTTG +
Preference number: 2 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTIHLVL*GHGVHL
Trigger: CAAGTGAACTCCATGGCCCCAAAGCACCAGATGAAT...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR-3UTR CCA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTCTCCTTCAGTCGTGCTaGCTAGAATCCAAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVLLQSC*LESKGS
Trigger: TGAGCCCTTGGATTCTAGCCAGCACGACTGAAGGAG...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGGCAGAAGAATTGGCTTaGTTTTTGGAATGTCTCCCC +
Preference number: 2 (lower is better)
Translates to: ESSANKSSSGNELPKGSMAEELA*FLECLP
Trigger: GGGGAGACATTCCAAAAATCAAGCCAATTCTTCTGC...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp AGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTCCGAACACCAGTTCTCCATCCTaGTGCTTAGTCGGAGGCTTC +
Preference number: 2 (lower is better)
Translates to: RALQQLCIDVNNVCLVPNTSSPS*CLVGGF
Trigger: GAAGCCTCCGACTAAGCAGCAGGATGGAGAACTGGT...GTTCGGAACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAAATTGGCTTGATTTTTaGAATGTCTCCCCGCACCTC +
Preference number: 2 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTNWLDF*NVSPHL
Trigger: GAGGTGCGGGGAGACATTCCAAAAATCAAGCCAATT...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR-3UTR CCA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGGTACTTCGATGTAGATaGGATCAGACACGATCTCTT +
Preference number: 2 (lower is better)
Translates to: ESSANKSSSGNELPKGSMVLRCR*DQTRSL
Trigger: AAGAGATCGTGTCTGATCCCATCTACATCGAAGTAC...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp AGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTCCGAACGGCTGCTTAGTAAAGTaGGGAAGTCCTTGTACTTCG +
Preference number: 2 (lower is better)
Translates to: RALQQLCIDVNNVCLVPNGCLVK*GSPCTS
Trigger: CGAAGTACAAGGACTTCCTCACTTTACTAAGCAGCC...GTTCGGAACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp AGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTCCGAACGAATGCTGCAATTCCTaGACGGGGAGTATCCATCAA +
Preference number: 2 (lower is better)
Translates to: RALQQLCIDVNNVCLVPNECCNS*TGSIHQ
Trigger: TTGATGGATACTCCCCGTTCAGGAATTGCAGCATTC...GTTCGGAACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAACAACATTCATCTGGTaGTTTGGGGCCATGGAGTTC +
Preference number: 2 (lower is better)
Translates to: NGQSNCPKDQALREFLCKTTFIW*FGAMEF
Trigger: GAACTCCATGGCCCCAAAGCACCAGATGAATGTTGT...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR-3UTR GCA 90 bp CTGTGTATTGACGTAAATAACGTCTGCTTGGTTCCGAACGTCAGGCAAACTTTCGTCTTTCATGCACGCTaGCTCACTGAGAAACTCCTC +
Preference number: 2 (lower is better)
Translates to: LCIDVNNVCLVPNVRQTFVFHAR*LTEKLL
Trigger: GAGGAGTTTCTCAGTGAGGCAGCGTGCATGAAAGAC...GAAAGTTTGCCTGACGTTCGGAACCAAGCAGACGTTATTTACGTCAATACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCTTAACAACATTCATCTaGTGCTTTGGGGCCATGGAG +
Preference number: 2 (lower is better)
Translates to: KNGQSNCPKDQALREFLCLTTFI*CFGAME
Trigger: CTCCATGGCCCCAAAGCACCAGATGAATGTTGTTAA...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR-3UTR CCA 90 bp AGAGTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCTGCAGCTGCTTGATTTaGTACAGATGTGGTAAGGCA +
Preference number: 2 (lower is better)
Translates to: RVVQLHGLHCHFQRGPIFCSCLI*YRCGKA
Trigger: TGCCTTACCACATCTGTACCAAATCAAGCAGCTGCA...GAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 90 bp ACTTTCTATGGCGATCCATTTAACAGGCATCTTAGCAATGCGGCCTaGGCGGTAATAATCGCCACTGTAAATCTTCTTAGAGAGGCCGAA +
Preference number: 2 (lower is better)
Translates to: TFYGDPFNRHLSNAA*AVIIATVNLLREAE
Trigger: TTCGGCCTCTCTAAGAAGATTTACAGTGGCGATTATTACCGCCAAGGCCGCATTGCTAAGATGCCTGTTAAATGGATCGCCATAGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTTGTGTAGACTCGGTCTaGAAGACTTTCTATGGCGAT +
Preference number: 2 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVCVDSV*KTFYGD
Trigger: ATCGCCATAGAAAGTCTTGCAGACCGAGTCTACACA...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTAATTACCATGGGCTTTaGGATGCCTTGAGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVNYHGL*DALRAH
Trigger: ATGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATT...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR TCA 90 bp CTGTGTATTGACGTAAATAACGTCTGCTTGGTTCCGAACGTCAGGCAAACTTTCACACGGCTACTGTTTTaGACCCAGAAAATGTTGACG +
Preference number: 2 (lower is better)
Translates to: LCIDVNNVCLVPNVRQTFTRLLF*TQKMLT
Trigger: CGTCAACATTTTCTGGGTTCAAAACAGTAGCCGTGT...GAAAGTTTGCCTGACGTTCGGAACCAAGCAGACGTTATTTACGTCAATACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp CGGAGGCTTCATCCATCTGATGTCCACATTATCACTAGATTCATTCAGAAACACGATCAGAATGCTGTGTaGAGTGCTGTTACGGATGCT +
Preference number: 2 (lower is better)
Translates to: RRLHPSDVHIITRFIQKHDQNAV*SAVTDA
Trigger: AGCATCCGTAACAGCACTGCACACAGCATTCTGATC...GTGTTTCTGAATGAATCTAGTGATAATGTGGACATCAGATGGATGAAGCCTCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGAACATCAGGTACAATTaGATTCTCCTACAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLNIRYN*ILLQQK
Trigger: CTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR CAA 90 bp TTTTTCCATATCTCTATAAAGCAATGCCAAGAATGGTCAGAGCAATaGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCA +
Preference number: 2 (lower is better)
Translates to: FFHISIKQCQEWSEQ*PQGPGIKGIPLQRP
Trigger: TGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGATATGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR-3UTR TCA 90 bp CTGTGTATTGACGTAAATAACGTCTGCTTGGTTCCGAACGTCAGGCAAACTTTCGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTC +
Preference number: 2 (lower is better)
Translates to: LCIDVNNVCLVPNVRQTFAAKSR*RKFLLL
Trigger: GAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGC...GAAAGTTTGCCTGACGTTCGGAACCAAGCAGACGTTATTTACGTCAATACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR GCA 90 bp CGGAGGCTTCATCCATCTGATGTCCACATTATCACTAGATTCATTCAGAAACACAGCCTATTTCATTCATaGAGGAAACACCAATGCTGT +
Preference number: 2 (lower is better)
Translates to: RRLHPSDVHIITRFIQKHSLFHS*RKHQCC
Trigger: ACAGCATTGGTGTTTCCTGCATGAATGAAATAGGCT...GTGTTTCTGAATGAATCTAGTGATAATGTGGACATCAGATGGATGAAGCCTCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 90 bp TTACTTAACAACATTCATCTGGTGCTTTGGGGCCATGGAGTTCACTaGGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATT +
Preference number: 2 (lower is better)
Translates to: LLNNIHLVLWGHGVH*VRKTNTKNIRYNWI
Trigger: AATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACCAAGTGAACTCCATGGCCCCAAAGCACCAGATGAATGTTGTTAAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
3UTR-3UTR CAA 90 bp CTCCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGAGCACAGGATCTGCGTaGCCAGGCGCCGGAGTTGAA +
Preference number: 3 (lower is better)
Translates to: LPAPLLTSGLLSLLRSRQSTGSA*PGAGVE
Trigger: TTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGCT...CTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR TCA 72 bp GATGAGCACAGGATCTGCGTTGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTACCCAACCGTGTGCAGG +
Preference number: 3 (lower is better)
Translates to: DEHRICVARRRS*RGGIIYPTVCR
Trigger: CCTGCACACGGTTGGGTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 72 bp TGCACTCCCTTGGACACGGTCAGCCCTTTGTCATTGTaGGCCTCACAACTGAAGACCGCCATCTCCGTCAGG +
Preference number: 3 (lower is better)
Translates to: CTPLDTVSPLSL*ASQLKTAISVR
Trigger: CCTGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAGGGAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp CCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGCAGCAGAGGAATATGCTTaGGTCCTGTCTCCAATCGGG +
Preference number: 3 (lower is better)
Translates to: PRTSPHIRTSEPSEESSAAEEYA*VLSPIG
Trigger: CCCGATTGGAGACAGGACCAAAGCATATTCCTCTGC...TGCTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 72 bp ATCACTGAAGGGCCCAACTCCCCCTCTGGTGACGGCTaGAATCCTCACTGTGCACGTAGCATTGTGGACTTG +
Preference number: 3 (lower is better)
Translates to: ITEGPNSPSGDG*NPHCARSIVDL
Trigger: CAAGTCCACAATGCTACGTGCACAGTGAGGATTGCAGCCGTCACCAGAGGGGGAGTTGGGCCCTTCAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 72 bp TCGGGCAATGAGCTTCCCAAGGGCAGCATGCTCGAATaGGACCAGGAGACCCCATTCCTAACAAGTCTCTCC +
Preference number: 3 (lower is better)
Translates to: SGNELPKGSMLE*DQETPFLTSLS
Trigger: GGAGAGACTTGTTAGGAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCCCTTGGGAAGCTCATTGCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp AGCATGCTCGAATGGGACCAGGAGACCCCATTCCTAACAAGTCTCTCCCCCGGTCGTAGCATTGTGGACTaGAACAGAGATCCGAGCTCG +
Preference number: 3 (lower is better)
Translates to: SMLEWDQETPFLTSLSPGRSIVD*NRDPSS
Trigger: CGAGCTCGGATCTCTGTTCAAGTCCACAATGCTACG...ACCGGGGGAGAGACTTGTTAGGAATGGGGTCTCCTGGTCCCATTCGAGCATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp AGCATGCTCGAATGGGACCAGGAGACCCCATTCCTAACAAGTCTCTCCCCCGGTCTTAGCAATGCGGCCTaGGCGGTAATAATCGCCACT +
Preference number: 3 (lower is better)
Translates to: SMLEWDQETPFLTSLSPGLSNAA*AVIIAT
Trigger: AGTGGCGATTATTACCGCCAAGGCCGCATTGCTAAG...ACCGGGGGAGAGACTTGTTAGGAATGGGGTCTCCTGGTCCCATTCGAGCATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR TCA 72 bp ACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTaGAGACCGCCATCTCCGTCAGGCCTGGAACAGTTA +
Preference number: 3 (lower is better)
Translates to: TRSALCHCGPHN*RPPSPSGLEQL
Trigger: TAACTGTTCCAGGCCTGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR TCA 72 bp GCTGCAATCCTCACTGTGCACGTAGCATTGTGGACTTaGACAGAGATCCGAGCTCGGCTGCCATTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: AAILTVHVALWT*TEIRARLPFWP
Trigger: TGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTCCACAATGCTACGTGCACAGTGAGGATTGCAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp AGCATGCTCGAATGGGACCAGGAGACCCCATTCCTAACAAGTCTCTCCCCCGGTTCCCGCTGTGAAGAGTaGTCCAACTTCATGGTCTTC +
Preference number: 3 (lower is better)
Translates to: SMLEWDQETPFLTSLSPGSRCEE*SNFMVF
Trigger: GAAGACCATGAAGTTGGACAACTCTTCACAGCGGGA...ACCGGGGGAGAGACTTGTTAGGAATGGGGTCTCCTGGTCCCATTCGAGCATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 72 bp AATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTaGAAAGGCCACAAGGCCGCTGCCGACCACTGTCTT +
Preference number: 3 (lower is better)
Translates to: NCPKDQALREFL*KGHKAAADHCL
Trigger: AAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR GCA 72 bp CAGAGGGGGCAGAAGTCAGATCTTCCCATTCCTCACTaGCCCCATTCAGGATGTACCGTCCTTCATGAGGTT +
Preference number: 3 (lower is better)
Translates to: QRGQKSDLPIPH*PHSGCTVLHEV
Trigger: AACCTCATGAAGGACGGTACATCCTGAATGGGGGCAGTGAGGAATGGGAAGATCTGACTTCTGCCCCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 72 bp TTAAAGGTGCTACTGATGGGGCTCCTTCAGTCGTGCTaGCTAGAATCCAAGGGCTCACTGCAGACCAGCCTA +
Preference number: 3 (lower is better)
Translates to: LKVLLMGLLQSC*LESKGSLQTSL
Trigger: TAGGCTGGTCTGCAGTGAGCCCTTGGATTCTAGCCAGCACGACTGAAGGAGCCCCATCAGTAGCACCTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp GATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCATTCATCTGGTGCTTaGGGGCCATGGAGTTCACTT +
Preference number: 3 (lower is better)
Translates to: DPSSAAILANFLQELFGNHSSGA*GPWSSL
Trigger: AAGTGAACTCCATGGCCCCAAAGCACCAGATGAATG...ATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCGTCAGCCCTTTGTCATaGTGGGCCTCACAACTGAAG +
Preference number: 3 (lower is better)
Translates to: KSTKAAKDDEHRICVARRVSPLS*WASQLK
Trigger: CTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGAC...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTTGCCAGGCGCCGGAGTaGAAGAGGGGGCATAATCTA +
Preference number: 3 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVCQAPE*KRGHNL
Trigger: TAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCA...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp GCAATGAGCTTCCCAAGGGCAGCATGCTCGAATGGGACCAGGAGACCCCATTCCAAACATCAGGTACAATaGGATTCTCCTACAGCAGAA +
Preference number: 3 (lower is better)
Translates to: AMSFPRAACSNGTRRPHSKHQVQ*DSPTAE
Trigger: TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTT...GGAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCCCTTGGGAAGCTCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 72 bp TCAGTTGGTGGGGAGGGAATTGCTTTGATGTTGATCTaGACTCCCTTGGACACGGTCAGCCCTTTGTCATTG +
Preference number: 3 (lower is better)
Translates to: SVGGEGIALMLI*TPLDTVSPLSL
Trigger: CAATGACAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAACATCAAAGCAATTCCCTCCCCACCAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 72 bp GTGTGCAGTGCTGTTACGGATGCTGACTTCAGTTGGTaGGGAGGGAATTGCTTTGATGTTGATCTGCACTCC +
Preference number: 3 (lower is better)
Translates to: VCSAVTDADFSW*GGNCFDVDLHS
Trigger: GGAGTGCAGATCAACATCAAAGCAATTCCCTCCCCACCAACTGAAGTCAGCATCCGTAACAGCACTGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp GTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCCTGAGGGCTTGCAGCTGCTaGATTTGGTACAGATGTGGT +
Preference number: 3 (lower is better)
Translates to: VVQLHGLHCHFQRGPIFLRACSC*IWYRCG
Trigger: ACCACATCTGTACCAAATCAAGCAGCTGCAAGCCCT...CAGGAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 72 bp ATCAAAACCAGGAACCCAGGAGATCAGAATGCTGTGTaGAGTGCTGTTACGGATGCTGACTTCAGTTGGTGG +
Preference number: 3 (lower is better)
Translates to: IKTRNPGDQNAV*SAVTDADFSWW
Trigger: CCACCAACTGAAGTCAGCATCCGTAACAGCACTGCACACAGCATTCTGATCTCCTGGGTTCCTGGTTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 72 bp AGAGTTTTTCTAGCTGCAGCCTCAATACTGAAAAGGTaGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGT +
Preference number: 3 (lower is better)
Translates to: RVFLAAASILKR*GGLRDRFSSKS
Trigger: ACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCACCTTTTCAGTATTGAGGCTGCAGCTAGAAAAACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTGGGGAGGGAATTGCTTaGATGTTGATCTGCACTCCC +
Preference number: 3 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVGEGIA*MLICTP
Trigger: GGGAGTGCAGATCAACATCAAAGCAATTCCCTCCCC...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 72 bp CCCAGGGCAATATCCACCATGAACTTCAATAGTGTCTaGAGAGGAATATGCTTTGGTCCTGTCTCCAATCGG +
Preference number: 3 (lower is better)
Translates to: PRAISTMNFNSV*RGICFGPVSNR
Trigger: CCGATTGGAGACAGGACCAAAGCATATTCCTCTGCAGACACTATTGAAGTTCATGGTGGATATTGCCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp GTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCCTGAAAGTGAGGAAGTCCTaGTACTTCGATGTAGATGGG +
Preference number: 3 (lower is better)
Translates to: VVQLHGLHCHFQRGPIFLKVRKS*YFDVDG
Trigger: CCCATCTACATCGAAGTACAAGGACTTCCTCACTTT...CAGGAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp CGGAGGCTTCATCCATCTGATGTCCACATTATCACTAGATTCATTCAGAAACACTTGATCTGCACTCCCTaGGACACGGTCAGCCCTTTG +
Preference number: 3 (lower is better)
Translates to: RRLHPSDVHIITRFIQKHLICTP*DTVSPL
Trigger: CAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAA...GTGTTTCTGAATGAATCTAGTGATAATGTGGACATCAGATGGATGAAGCCTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp AGAAACACAGTGACATTTAAAGGTGCTACTGATGGGGCTCCTTCAGTCGTGCTGGGAATTGCTTTGATGTaGATCTGCACTCCCTTGGAC +
Preference number: 3 (lower is better)
Translates to: RNTVTFKGATDGAPSVVLGIALM*ICTPLD
Trigger: GTCCAAGGGAGTGCAGATCAACATCAAAGCAATTCC...CAGCACGACTGAAGGAGCCCCATCAGTAGCACCTTTAAATGTCACTGTGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTGGGCTTTGGGATGCCTaGAGAGCTCATTTCTATACA +
Preference number: 3 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVGLWDA*RAHFYT
Trigger: TGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCCC...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTAAATTACCATGGGCTTaGGGATGCCTTGAGAGCTCA +
Preference number: 3 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVKLPWA*GCLESS
Trigger: TGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATTT...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 72 bp ATTAAGGGAATTCCTTTGCAAAGGCCACAAGGCCGCTaGCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCA +
Preference number: 3 (lower is better)
Translates to: IKGIPLQRPQGR*RPLSFKSQVSS
Trigger: TGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR CCA 72 bp TCTATACACACACCTAGAAGTCGAATGACATTTGGGTaGCTGAAGTCTTTCATGCACGCTGCCTCACTGAGA +
Preference number: 3 (lower is better)
Translates to: SIHTPRSRMTFG*LKSFMHAASLR
Trigger: TCTCAGTGAGGCAGCGTGCATGAAAGACTTCAGCCACCCAAATGTCATTCGACTTCTAGGTGTGTGTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 72 bp ACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATaGCAAGAATGGTCAGAGCAATTGCCCCAAGGACCA +
Preference number: 3 (lower is better)
Translates to: TLVWFFHISIKQ*QEWSEQLPQGP
Trigger: TGGTCCTTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR GCA 72 bp GTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCCTaGTTAAGATTTCCTTCCATTACAGACCCAAACTCT +
Preference number: 3 (lower is better)
Translates to: VFTATFREVPSS*LRFPSITDPNS
Trigger: AGAGTTTGGGTCTGTAATGGAAGGAAATCTTAAGCAGGAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 72 bp ATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTaGCTTGATTTTTGGAATGTCTCCCCGCACCTCTCC +
Preference number: 3 (lower is better)
Translates to: IRYNWILLQQKN*LDFWNVSPHLS
Trigger: GGAGAGGTGCGGGGAGACATTCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
3UTR TCA 72 bp TCTCGCAACATGCAGTTTCGAGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTCAGATACTCCATTCCC +
Preference number: 3 (lower is better)
Translates to: SRNMQFRAAKSR*RKFLLLRYSIP
Trigger: GGGAATGGAGTATCTGAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGCTCGAAACTGCATGTTGCGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR GCA 72 bp TTCGAGCAGCTAAATCTCGATGAAGAAAATTCCTGTTaGTCAGATACTCCATTCCCAGGGCAATATCCACCA +
Preference number: 3 (lower is better)
Translates to: FEQLNLDEENSC*SDTPFPGQYPP
Trigger: TGGTGGATATTGCCCTGGGAATGGAGTATCTGAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGCTCGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR-3UTR CAA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATCATTCATCTGGTGCTTaGGGGCCATGGAGTTCACTT +
Preference number: 3 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHHSSGA*GPWSSL
Trigger: AAGTGAACTCCATGGCCCCAAAGCACCAGATGAATG...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR-3UTR CAA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAATTAAGGGAATTCCTTaGCAAAGGCCACAAGGCCGC +
Preference number: 3 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRIKGIP*QRPQGR
Trigger: GCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAAT...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR TCA 72 bp ATGAAGGGTAAAATTACCATGGGCTTTGGGATGCCTTaGGAGCTCATTTCTATACACACACCTAGAAGTCGA +
Preference number: 3 (lower is better)
Translates to: MKGKITMGFGMP*ELISIHTPRSR
Trigger: TCGACTTCTAGGTGTGTGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATTTTACCCTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CCA 72 bp TGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAATaGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAG +
Preference number: 3 (lower is better)
Translates to: WFFHISIKQCQE*SEQLPQGPGIK
Trigger: CTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGATATGGAAAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR-3UTR CAA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATAGCAGAAGAATTGGCTaGATTTTTGGAATGTCTCCC +
Preference number: 3 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHSRRIG*IFGMSP
Trigger: GGGAGACATTCCAAAAATCAAGCCAATTCTTCTGCT...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR CCA 72 bp TCAATATTCTTTATTCCTTATCTACAGACCCTGGTGTaGTTTTTCCATATCTCTATAAAGCAATGCCAAGAA +
Preference number: 3 (lower is better)
Translates to: SIFFIPYLQTLV*FFHISIKQCQE
Trigger: TTCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAAGGAATAAAGAATATTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGCGGGCCCACAGCCTaGCAGGTGAGGTTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: NRDPSSAAILANFLQELFGGPTA*QVRLKA
Trigger: AGCCTTCAACCTCACCTGTCAGGCTGTGGGCCCGCC...AAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CTCCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGGCTCGGCTGCCATTCTaGCCAACTTCCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: LPAPLLTSGLLSLLRSRQARLPF*PTSSKS
Trigger: GCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGC...CTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGCATCCAGGCTGGGTTGGTaGAAACATCAAGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PRTSPHIRTSEPSEESSASRLGW*KHQGRL
Trigger: CAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGA...TGCTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAGGCGGGCCCACAGCCTaGCAGGTGAGGTTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTGGPTA*QVRLKA
Trigger: AGCCTTCAACCTCACCTGTCAGGCTGTGGGCCCGCC...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp CTCCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGAGATCCGAGCTCGGCTaGCATTCTGGCCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: LPAPLLTSGLLSLLRSRQRSELG*HSGQLP
Trigger: AGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCT...CTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CTTGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTGAAGACCGCCATGCCCCATCCCGGGGCTaGGGATCTGTAATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LGHGQPFVIVGLTTEDRHAPSRG*GSVISL
Trigger: GAGAGAAATTACAGATCCGCAGCCCCGGGATGGGGC...ATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp AACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGATGAGCACAGGATCTaGGTTGCCAGGCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: NRDPSSAAILANFLQELFDEHRI*VARRRS
Trigger: ACTCCGGCGCCTGGCAACGCAGATCCTGTGCTCATC...AAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp GCAATGAGCTTCCCAAGGGCAGCATGCTCGAATGGGACCAGGAGACCCCATTCCCCTCCAAGAGCTCTTTaGAAATCCCTGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: AMSFPRAACSNGTRRPHSPPRAL*KSLHSA
Trigger: GGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGG...GGAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCCCTTGGGAAGCTCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 72 bp ATCTGCACTCCCTTGGACACGGTCAGCCCTTTGTCATaGTGGGCCTCACAACTGAAGACCGCCATCTCCGTC +
Preference number: 4 (lower is better)
Translates to: ICTPLDTVSPLS*WASQLKTAISV
Trigger: GACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAGGGAGTGCAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 72 bp GGCTGCAATCCTCACTGTGCACGTAGCATTGTGGACTaGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GCNPHCARSIVD*NRDPSSAAILA
Trigger: GGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTCCACAATGCTACGTGCACAGTGAGGATTGCAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACGAACCCAGAAAATGTTaGCGGGCTCAGGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: QSNCPKDQALREFLCKGHEPRKC*RAQAGP
Trigger: TGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTC...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp ATCTCCGTCAGGCCTGGAACAGTTAGCACGGAGGGGGATTTTTCAGGCTGTTCGTGCTGTTACGGATGCTaGCTTCAGTTGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ISVRPGTVSTEGDFSGCSCCYGC*LQLVGR
Trigger: CCTCCCCACCAACTGAAGTCAGCATCCGTAACAGCA...CGAACAGCCTGAAAAATCCCCCTCCGTGCTAACTGTTCCAGGCCTGACGGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATTGCACGCTGCCTCACTaGGAAACTCCTCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: DPSSAAILANFLQELFGNCTLPH*ETPRSP
Trigger: GGGAGATCGAGGAGTTTCTCAGTGAGGCAGCGTGCA...ATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGCAGCTTTGATGTTGATCTaGACTCCCTTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: PRTSPHIRTSEPSEESSAALMLI*TPLDTV
Trigger: GACCGTGTCCAAGGGAGTGCAGATCAACATCAAAGC...TGCTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CTTGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTGAAGACCGCCATGAAATCCCTGCACTCTaGCACACGTGGGATATCCGG +
Preference number: 4 (lower is better)
Translates to: LGHGQPFVIVGLTTEDRHEIPAL*HTWDIR
Trigger: CCGGATATCCCACGTGTGGCAGAGTGCAGGGATTTC...ATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAGATGAGCACAGGATCTaGGTTGCCAGGCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTDEHRI*VARRRS
Trigger: ACTCCGGCGCCTGGCAACGCAGATCCTGTGCTCATC...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR CAA 72 bp CAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTaGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCT +
Preference number: 4 (lower is better)
Translates to: QLPQGPGIKGIP*QRPQGRCRPLS
Trigger: AGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCTGTGGGCCTCACAACTaGAGACCGCCATCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: KSTKAAKDDEHRICVARRCGPHN*RPPSPS
Trigger: TGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACA...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CTCCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGTCAGCTTCCTTGACCTaGATGCTGCAATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LPAPLLTSGLLSLLRSRQSASLT*MLQFLN
Trigger: GTTCAGGAATTGCAGCATTCAGGTCAAGGAAGCTGA...CTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCCTGCAACTCCCCCTCTGGTaGCGGCTGCAATCCTCACTG +
Preference number: 4 (lower is better)
Translates to: VVQLHGLHCHFQRGPIFLQLPLW*RLQSSL
Trigger: CAGTGAGGATTGCAGCCGTCACCAGAGGGGGAGTTG...CAGGAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACTTTTCACTGGATCACTaGAGGGCCCAACTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHFSLDH*RAQLPL
Trigger: GAGGGGGAGTTGGGCCCTTCAGTGATCCAGTGAAAA...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACTGCACGCTGCCTCACTaGGAAACTCCTCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: QSNCPKDQALREFLCKGHCTLPH*ETPRSP
Trigger: GGGAGATCGAGGAGTTTCTCAGTGAGGCAGCGTGCA...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp ATTCCTTTGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAACCCTCTGGTGACGGCTaGAATCCTCACTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: IPLQRPQGRCRPLSFKSQPSGDG*NPHCAR
Trigger: ACGTGCACAGTGAGGATTGCAGCCGTCACCAGAGGG...TTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp ACGGCTACTGTTTTGAACCCAGAAAATGTTGACGGGCTCAGGCGGGCCCACAGCGCTGCACACTGGTTATaGTGGGGAATGGCTACGTTT +
Preference number: 4 (lower is better)
Translates to: TATVLNPENVDGLRRAHSAAHWL*WGMATF
Trigger: AAACGTAGCCATTCCCCAGCATAACCAGTGTGCAGC...GCTGTGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTCAAAACAGTAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACTTCTCTCCGGACGGATaGACAGATGGACGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHFSPDG*TDGRPE
Trigger: TTCGGGACGTCCATCTGTCCATCCGTCCGGAGAGAA...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp AACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTCAGGCTGGTACCCACTaGCGTGAGGAAGGGATAACA +
Preference number: 4 (lower is better)
Translates to: NRDPSSAAILANFLQELFQAGTH*REEGIT
Trigger: TGTTATCCCTTCCTCACGCCAGTGGGTACCAGCCTG...AAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGGGCAGCATGCTCGAATaGGACCAGGAGACCCCATTC +
Preference number: 4 (lower is better)
Translates to: ESSANKSSSGNELPKGSMGSMLE*DQETPF
Trigger: GAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCC...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CTCCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGATTCATCTGGTGCTTTaGGGCCATGGAGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: LPAPLLTSGLLSLLRSRQIHLVL*GHGVHL
Trigger: CAAGTGAACTCCATGGCCCCAAAGCACCAGATGAAT...CTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
3UTR CAA 72 bp ATGTTGATCTGCACTCCCTTGGACACGGTCAGCCCTTaGTCATTGTGGGCCTCACAACTGAAGACCGCCATC +
Preference number: 4 (lower is better)
Translates to: MLICTPLDTVSP*SLWASQLKTAI
Trigger: GATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACTCCAGGCTGGGTTGGTaGAAACATCAAGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QSNCPKDQALREFLCKGHSRLGW*KHQGRL
Trigger: CAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGA...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAGTCCAACTGTGTGTTTaGAGGCAAGAGGCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTVQLCV*RQEAVG
Trigger: CCCTACCGCCTCTTGCCTTCAAACACACAGTTGGAC...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp GCTCTCAGGCTGCTTAGTAAAGTGAGGAAGTCCTTGTACTTCGATGTAGATGGGGAACCCAGAAAATGTTaGCGGGCTCAGGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ALRLLSKVRKSLYFDVDGEPRKC*RAQAGP
Trigger: TGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTC...CCCATCTACATCGAAGTACAAGGACTTCCTCACTTTACTAAGCAGCCTGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCTGTTCTTTTCAGCTGTaGCTGCAGCAGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KSTKAAKDDEHRICVARRCSFQL*LQQRGQ
Trigger: CTGCCCCCTCTGCTGCAGTCACAGCTGAAAAGAACA...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp GACTTGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGGCCAGGGCTTGCAGCTaGTTGATTTGGTACAGATGT +
Preference number: 4 (lower is better)
Translates to: DLNRDPSSAAILANFLQEARACS*LIWYRC
Trigger: ACATCTGTACCAAATCAAGCAGCTGCAAGCCCTGGC...CTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACCTCTTTGGAAATCCCTaGACTCTGCCACACGTGGGA +
Preference number: 4 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHLFGNP*TLPHVG
Trigger: TCCCACGTGTGGCAGAGTGCAGGGATTTCCAAAGAG...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp GCTCTCAGGCTGCTTAGTAAAGTGAGGAAGTCCTTGTACTTCGATGTAGATGGGGCACAGGATCTGCGTTaGCAGGCGCCGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ALRLLSKVRKSLYFDVDGAQDLR*QAPELK
Trigger: CTTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGC...CCCATCTACATCGAAGTACAAGGACTTCCTCACTTTACTAAGCAGCCTGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACCAGGCTGGTACCCACTaGCGTGAGGAAGGGATAACA +
Preference number: 4 (lower is better)
Translates to: QSNCPKDQALREFLCKGHQAGTH*REEGIT
Trigger: TGTTATCCCTTCCTCACGCCAGTGGGTACCAGCCTG...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp ATCTCCGTCAGGCCTGGAACAGTTAGCACGGAGGGGGATTTTTCAGGCTGTTCGAGCCCTTTGTCATTGTaGGCCTCACAACTGAAGACC +
Preference number: 4 (lower is better)
Translates to: ISVRPGTVSTEGDFSGCSSPLSL*ASQLKT
Trigger: GGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCT...CGAACAGCCTGAAAAATCCCCCTCCGTGCTAACTGTTCCAGGCCTGACGGAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCGATGTTCAAGTCCAGTaGAGCAAGGGTGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KSTKAAKDDEHRICVARRDVQVQ*SKGGAL
Trigger: CAGGGCTCCACCCTTGCTCCACTGGACTTGAACATC...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CTTGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTGAAGACCGCCATGAATGCTGCAATTCCTaGACGGGGAGTATCCATCAA +
Preference number: 4 (lower is better)
Translates to: LGHGQPFVIVGLTTEDRHECCNS*TGSIHQ
Trigger: TTGATGGATACTCCCCGTTCAGGAATTGCAGCATTC...ATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATGGGCTTGCAGCTGCTTaGTTTGGTACAGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: DPSSAAILANFLQELFGNGLAAA*FGTDVV
Trigger: TACCACATCTGTACCAAATCAAGCAGCTGCAAGCCC...ATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp GTGCAGGAGGCAATTATAGAGTCAGGGTCGATGTTCAAGTCCAGTGGAGCAAGGACCAGTTCTCCATCCTaGTGCTTAGTCGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: VQEAIIESGSMFKSSGARTSSPS*CLVGGF
Trigger: GAAGCCTCCGACTAAGCAGCAGGATGGAGAACTGGT...CCTTGCTCCACTGGACTTGAACATCGACCCTGACTCTATAATTGCCTCCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGAGGCAGTCTTCGGGCTaGTTCAACCTGTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLRQSSG*FNLWPW
Trigger: CCATGGCCACAGGTTGAAGCAGCCCGAAGACTGCCT...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGCTTCCCATTCCTCACTaGCCCCATTCAGGATGTACC +
Preference number: 4 (lower is better)
Translates to: ESSANKSSSGNELPKGSMLPIPH*PHSGCT
Trigger: GGTACATCCTGAATGGGGGCAGTGAGGAATGGGAAG...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CTGAATGCTGCAATTCCTGAACGGGGAGTATCCATCAAAACCAGGAACCCAGGATTCCCAAGGGCAGCATaGTCGAATGGGACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LNAAIPERGVSIKTRNPGFPRAA*SNGTRR
Trigger: TCTCCTGGTCCCATTCGAGCATGCTGCCCTTGGGAA...TCCTGGGTTCCTGGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGCAGTACTTCGATGTAGATaGGATCAGACACGATCTCTT +
Preference number: 4 (lower is better)
Translates to: PRTSPHIRTSEPSEESSAVLRCR*DQTRSL
Trigger: AAGAGATCGTGTCTGATCCCATCTACATCGAAGTAC...TGCTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp GTGCAGGAGGCAATTATAGAGTCAGGGTCGATGTTCAAGTCCAGTGGAGCAAGGCTCCTTCAGTCGTGCTaGCTAGAATCCAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: VQEAIIESGSMFKSSGARLLQSC*LESKGS
Trigger: TGAGCCCTTGGATTCTAGCCAGCACGACTGAAGGAG...CCTTGCTCCACTGGACTTGAACATCGACCCTGACTCTATAATTGCCTCCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp GAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAGCTCGGCTGCCATTCTaGCCAACTTCCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: EWSEQLPQGPGIKGIPLQARLPF*PTSSKS
Trigger: GCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGC...TTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACTCAATACTGAAAAGGTaGGGCGGTCTAAGGGATCGG +
Preference number: 4 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHSILKR*GGLRDR
Trigger: CCGATCCCTTAGACCGCCCCACCTTTTCAGTATTGA...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACGGTGCTTTGGGGCCATaGAGTTCACTTGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHGALGP*SSLGKE
Trigger: TTCCTTACCAAGTGAACTCCATGGCCCCAAAGCACC...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGCTGAACGCTGCACACTaGTTATGCTGGGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: ESSANKSSSGNELPKGSMLNAAH*LCWGMA
Trigger: AGCCATTCCCCAGCATAACCAGTGTGCAGCGTTCAG...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CTTGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTGAAGACCGCCATGGGCAATATCCACCATaGACTTCAATAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LGHGQPFVIVGLTTEDRHGQYPP*TSIVSA
Trigger: TGCAGACACTATTGAAGTTCATGGTGGATATTGCCC...ATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GACTTGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGGCAGAAGAATTGGCTTaGTTTTTGGAATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: DLNRDPSSAAILANFLQEAEELA*FLECLP
Trigger: GGGGAGACATTCCAAAAATCAAGCCAATTCTTCTGC...CTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGCCCCATCCCGGGGCTaGGGATCTGTAATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKAPSRG*GSVISL
Trigger: GAGAGAAATTACAGATCCGCAGCCCCGGGATGGGGC...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACGATCAGAATGCTGTGTaGAGTGCTGTTACGGATGCT +
Preference number: 4 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHDQNAV*SAVTDA
Trigger: AGCATCCGTAACAGCACTGCACACAGCATTCTGATC...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CTTGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTGAAGACCGCCATAATCCAAGGGCTCACTaGAGACCAGCCTATTTCATT +
Preference number: 4 (lower is better)
Translates to: LGHGQPFVIVGLTTEDRHNPRAH*RPAYFI
Trigger: AATGAAATAGGCTGGTCTGCAGTGAGCCCTTGGATT...ATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTGGGCTCCTTCAGTCGTaGTGGCTAGAATCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVGLLQS*WLESKG
Trigger: GCCCTTGGATTCTAGCCAGCACGACTGAAGGAGCCC...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAGATCCGAGCTCGGCTaGCATTCTGGCCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: KNGQSNCPKDQALREFLCRSELG*HSGQLP
Trigger: AGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCT...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp ATTCCTTTGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAACTTCATGGTCTTCACTaGCACTTTCAGAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: IPLQRPQGRCRPLSFKSQLHGLH*HFQRGP
Trigger: GGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAG...TTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp AACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTCCATGGGCTTTGGGATaGCTTGAGAGCTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: NRDPSSAAILANFLQELFPWALG*LESSFL
Trigger: TAGAAATGAGCTCTCAAGGCATCCCAAAGCCCATGG...AAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp AGCATGCTCGAATGGGACCAGGAGACCCCATTCCTAACAAGTCTCTCCCCCGGTTGTCATCTCGCAACATaGAGTTTCGAGCAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: SMLEWDQETPFLTSLSPGCHLAT*SFEQLN
Trigger: ATTTAGCTGCTCGAAACTGCATGTTGCGAGATGACA...ACCGGGGGAGAGACTTGTTAGGAATGGGGTCTCCTGGTCCCATTCGAGCATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAAGGCCACAAGGCCGCTaGCGACCACTGTCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKRPQGR*RPLSFK
Trigger: CTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp CTTGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTGAAGACCGCCATCGAATGACATTTGGGTaGCTGAAGTCTTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: LGHGQPFVIVGLTTEDRHRMTFG*LKSFMH
Trigger: GTGCATGAAAGACTTCAGCCACCCAAATGTCATTCG...ATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CTTGGACACGGTCAGCCCTTTGTCATTGTGGGCCTCACAACTGAAGACCGCCATAATTACCATGGGCTTTaGGATGCCTTGAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LGHGQPFVIVGLTTEDRHNYHGL*DALRAH
Trigger: ATGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATT...ATGGCGGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGGATGTTCAAGTCCAGTaGAGCAAGGGTGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLDVQVQ*SKGGAL
Trigger: CAGGGCTCCACCCTTGCTCCACTGGACTTGAACATC...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp ATTCCTTTGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGGTGCTTTGGGGCCATaGAGTTCACTTGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: IPLQRPQGRCRPLSFKSQGALGP*SSLGKE
Trigger: TTCCTTACCAAGTGAACTCCATGGCCCCAAAGCACC...TTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp GTGCAGGAGGCAATTATAGAGTCAGGGTCGATGTTCAAGTCCAGTGGAGCAAGGGCACACTGGTTATGCTaGGGAATGGCTACGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VQEAIIESGSMFKSSGARAHWLC*GMATFP
Trigger: AGGAAACGTAGCCATTCCCCAGCATAACCAGTGTGC...CCTTGCTCCACTGGACTTGAACATCGACCCTGACTCTATAATTGCCTCCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCGGCTGCTTAGTAAAGTaGGGAAGTCCTTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: KSTKAAKDDEHRICVARRGCLVK*GSPCTS
Trigger: CGAAGTACAAGGACTTCCTCACTTTACTAAGCAGCC...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGGCGGGCCCACAGCCTaGCAGGTGAGGTTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAGGPTA*QVRLKA
Trigger: AGCCTTCAACCTCACCTGTCAGGCTGTGGGCCCGCC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp ATTCCTTTGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGAATGCTGCAATTCCTaGACGGGGAGTATCCATCAA +
Preference number: 4 (lower is better)
Translates to: IPLQRPQGRCRPLSFKSQECCNS*TGSIHQ
Trigger: TTGATGGATACTCCCCGTTCAGGAATTGCAGCATTC...TTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp CGGAGGCTTCATCCATCTGATGTCCACATTATCACTAGATTCATTCAGAAACACGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTAC +
Preference number: 4 (lower is better)
Translates to: RRLHPSDVHIITRFIQKHARRRS*RGGIIY
Trigger: GTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGC...GTGTTTCTGAATGAATCTAGTGATAATGTGGACATCAGATGGATGAAGCCTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACCAGAATCCTCCTCTGTaGATGCATTCCCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHQNPPL*MHSQTL
Trigger: CAAAGTTTGGGAATGCATTCACAGAGGAGGATTCTG...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGAAGTTCATCGGGCAATaGGCTTCCCAAGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLKFIGQ*ASQGQH
Trigger: ATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTT...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AGCTTCCTTGACCTGAATGCTGCAATTCCTGAACGGGGAGTATCCATCAAAACCAAGTTCATCGGGCAATaGGCTTCCCAAGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SFLDLNAAIPERGVSIKTKFIGQ*ASQGQH
Trigger: ATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTT...GGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCATTCAGGTCAAGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCCTTCCCATTCCTCACTaGCCCCATTCAGGATGTACC +
Preference number: 4 (lower is better)
Translates to: KNGQSNCPKDQALREFLCLPIPH*PHSGCT
Trigger: GGTACATCCTGAATGGGGGCAGTGAGGAATGGGAAG...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAACAACATTCATCTGGTaGTTTGGGGCCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTTTFIW*FGAMEF
Trigger: GAACTCCATGGCCCCAAAGCACCAGATGAATGTTGT...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGGATAACAGCGGTGTGTaGTCAGTTTGCAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLDNSGV*SVCRLP
Trigger: AGGGAGCCTGCAAACTGACCACACACCGCTGTTATC...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCCAGAGGAATATGCTTTaGTCCTGTCTCCAATCGGGA +
Preference number: 4 (lower is better)
Translates to: KSTKAAKDDEHRICVARRQRNML*SCLQSG
Trigger: TCCCGATTGGAGACAGGACCAAAGCATATTCCTCTG...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACATTCATCTGGTGCTTTaGGGCCATGGAGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: QSNCPKDQALREFLCKGHIHLVL*GHGVHL
Trigger: CAAGTGAACTCCATGGCCCCAAAGCACCAGATGAAT...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCGGTTATGCTGGGGAATaGCTACGTTTCCTGTATGTG +
Preference number: 4 (lower is better)
Translates to: KSTKAAKDDEHRICVARRGYAGE*LRFLYV
Trigger: CACATACAGGAAACGTAGCCATTCCCCAGCATAACC...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGAGGCTGTGTTTCTGGTaGCATTCATGCTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLRLCFW*HSCSQA
Trigger: AGCCTGAGAGCATGAATGTCACCAGAAACACAGCCT...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGGCGGGCCCACAGCCTaGCAGGTGAGGTTGAAGGCT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELGGPTA*QVRLKA
Trigger: AGCCTTCAACCTCACCTGTCAGGCTGTGGGCCCGCC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCACACGGCTACTGTTTTaGACCCAGAAAATGTTGACG +
Preference number: 4 (lower is better)
Translates to: KSTKAAKDDEHRICVARRTRLLF*TQKMLT
Trigger: CGTCAACATTTTCTGGGTTCAAAACAGTAGCCGTGT...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACCCTGGACTCTTTTTCTaGTGGCCAAGGAGATGTATA +
Preference number: 4 (lower is better)
Translates to: QSNCPKDQALREFLCKGHPGLFF*WPRRCI
Trigger: TATACATCTCCTTGGCCATCAGAAAAAGAGTCCAGG...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACGCAGAAGAATTGGCTTaGTTTTTGGAATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: QSNCPKDQALREFLCKGHAEELA*FLECLP
Trigger: GGGGAGACATTCCAAAAATCAAGCCAATTCTTCTGC...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCGCCAGGGCTTGCAGCTaGTTGATTTGGTACAGATGT +
Preference number: 4 (lower is better)
Translates to: KNGQSNCPKDQALREFLCARACS*LIWYRC
Trigger: ACATCTGTACCAAATCAAGCAGCTGCAAGCCCTGGC...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp AACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGAGGTCCCATCTTCCTaGTTAAGATTTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: NRDPSSAAILANFLQELFEVPSS*LRFPSI
Trigger: AATGGAAGGAAATCTTAAGCAGGAAGATGGGACCTC...AAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTCTTCATGGTCTTCACTaGCACTTTCAGAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVLHGLH*HFQRGP
Trigger: GGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAG...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTGTCTTTCATGCACGCTaGCTCACTGAGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVVFHAR*LTEKLL
Trigger: GAGGAGTTTCTCAGTGAGGCAGCGTGCATGAAAGAC...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACGTCCTTCATGAGGTTTaGTGTCATGAACTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSNCPKDQALREFLCKGHVLHEV*CHELLL
Trigger: CAGCAGAAGTTCATGACAGCAAACCTCATGAAGGAC...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp CTGAATGCTGCAATTCCTGAACGGGGAGTATCCATCAAAACCAGGAACCCAGGAGCTGACTTCAGTTGGTaGGGAGGGAATTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LNAAIPERGVSIKTRNPGADFSW*GGNCFD
Trigger: ATCAAAGCAATTCCCTCCCCACCAACTGAAGTCAGC...TCCTGGGTTCCTGGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAATACGACCCATTGTCTaGACGCTGCACACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: EWSEQLPQGPGIKGIPLQIRPIV*TLHTGY
Trigger: ATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTAT...TTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGAACCCAGAAAATGTTaGCGGGCTCAGGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGEPRKC*RAQAGP
Trigger: TGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAATCAGCTTCCTTGACCTaGATGCTGCAATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: EWSEQLPQGPGIKGIPLQSASLT*MLQFLN
Trigger: GTTCAGGAATTGCAGCATTCAGGTCAAGGAAGCTGA...TTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGGTTAAAAATCATGACTaGGCCATTACTCAGCGGATC +
Preference number: 4 (lower is better)
Translates to: ESSANKSSSGNELPKGSMVKNHD*AITQRI
Trigger: GATCCGCTGAGTAATGGCTCAGTCATGATTTTTAAC...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGACAACTCCCCCTCTGGTaGCGGCTGCAATCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRQLPLW*RLQSSL
Trigger: CAGTGAGGATTGCAGCCGTCACCAGAGGGGGAGTTG...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp TTTTTCCATATCTCTATAAAGCAATGCCAAGAATGGTCAGAGCAATTGCCCCAAGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTAC +
Preference number: 4 (lower is better)
Translates to: FFHISIKQCQEWSEQLPQARRRS*RGGIIY
Trigger: GTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGC...TTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGATATGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTAAKSR*RKFLLL
Trigger: GAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGC...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AAATCCACAAAAGCAGCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KSTKAAKDDEHRICVARRAAKSR*RKFLLL
Trigger: GAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGC...GCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGCTGCTTTTGTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAGCACAGGATCTGCGTTaGCAGGCGCCGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRAQDLR*QAPELK
Trigger: CTTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGC...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGCACAGGATCTGCGTTaGCAGGCGCCGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWAQDLR*QAPELK
Trigger: CTTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGATGAGCACAGGATCTaGGTTGCCAGGCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWDEHRI*VARRRS
Trigger: ACTCCGGCGCCTGGCAACGCAGATCCTGTGCTCATC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ATTCCTTTGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGAGGTCCCATCTTCCTaGTTAAGATTTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: IPLQRPQGRCRPLSFKSQEVPSS*LRFPSI
Trigger: AATGGAAGGAAATCTTAAGCAGGAAGATGGGACCTC...TTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCCATGGGCTTTGGGATaGCTTGAGAGCTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLPWALG*LESSFL
Trigger: TAGAAATGAGCTCTCAAGGCATCCCAAAGCCCATGG...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp GACTTGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGAACTTCAATAGTGTCTaGAGAGGAATATGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: DLNRDPSSAAILANFLQENFNSV*RGICFG
Trigger: ACCAAAGCATATTCCTCTGCAGACACTATTGAAGTT...CTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp ATTCCTTTGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAATGTCATCTCGCAACATaGAGTTTCGAGCAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: IPLQRPQGRCRPLSFKSQCHLAT*SFEQLN
Trigger: ATTTAGCTGCTCGAAACTGCATGTTGCGAGATGACA...TTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp GTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCCTGTGTGTAGACTCGGTCTaGAAGACTTTCTATGGCGAT +
Preference number: 4 (lower is better)
Translates to: VVQLHGLHCHFQRGPIFLCVDSV*KTFYGD
Trigger: ATCGCCATAGAAAGTCTTGCAGACCGAGTCTACACA...CAGGAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp AGCTTCCTTGACCTGAATGCTGCAATTCCTGAACGGGGAGTATCCATCAAAACCGACGTAAATAACGTCTaGTTGGTTCCGAACGTCAGG +
Preference number: 4 (lower is better)
Translates to: SFLDLNAAIPERGVSIKTDVNNV*LVPNVR
Trigger: CCTGACGTTCGGAACCAAGCAGACGTTATTTACGTC...GGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCATTCAGGTCAAGGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGGATGCTGACTTCAGTTaGTGGGGAGGGAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLDADFS*WGGNCF
Trigger: AAAGCAATTCCCTCCCCACCAACTGAAGTCAGCATC...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AGAGTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCGATGCTGACTTCAGTTaGTGGGGAGGGAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: RVVQLHGLHCHFQRGPIFDADFS*WGGNCF
Trigger: AAAGCAATTCCCTCCCCACCAACTGAAGTCAGCATC...GAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAGAGGAATATGCTTTaGTCCTGTCTCCAATCGGGA +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLQRNML*SCLQSG
Trigger: TCCCGATTGGAGACAGGACCAAAGCATATTCCTCTG...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp CTGAATGCTGCAATTCCTGAACGGGGAGTATCCATCAAAACCAGGAACCCAGGAAATTGGCTTGATTTTTaGAATGTCTCCCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: LNAAIPERGVSIKTRNPGNWLDF*NVSPHL
Trigger: GAGGTGCGGGGAGACATTCCAAAAATCAAGCCAATT...TCCTGGGTTCCTGGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCATTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp CCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCCCTGCACTCTGCCACAACATCAGGTACAATTaGATTCTCCTACAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PFWPTSSKSSLEIPALCHNIRYN*ILLQQK
Trigger: CTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT...GTGGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGAACCCAGAAAATGTTaGCGGGCTCAGGCGGGCCCA +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELEPRKC*RAQAGP
Trigger: TGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATTGTGGGCCTCACAACTaGAGACCGCCATCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHCGPHN*RPPSPS
Trigger: TGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACA...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGTGTGGGCCTCACAACTaGAGACCGCCATCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWCGPHN*RPPSPS
Trigger: TGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACA...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCATGTGGGCCTCACAACTaGAGACCGCCATCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTACGPHN*RPPSPS
Trigger: TGACGGAGATGGCGGTCTTCAGTTGTGAGGCCCACA...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGCAACTCCCCCTCTGGTaGCGGCTGCAATCCTCACTG +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELQLPLW*RLQSSL
Trigger: CAGTGAGGATTGCAGCCGTCACCAGAGGGGGAGTTG...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTAC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELARRRS*RGGIIY
Trigger: GTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTAC +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEARRRS*RGGIIY
Trigger: GTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GCTCTCAGGCTGCTTAGTAAAGTGAGGAAGTCCTTGTACTTCGATGTAGATGGGCCTGGACTCTTTTTCTaGTGGCCAAGGAGATGTATA +
Preference number: 4 (lower is better)
Translates to: ALRLLSKVRKSLYFDVDGPGLFF*WPRRCI
Trigger: TATACATCTCCTTGGCCATCAGAAAAAGAGTCCAGG...CCCATCTACATCGAAGTACAAGGACTTCCTCACTTTACTAAGCAGCCTGAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTTTTGTAGTTCCTCACTaGCTCCCAAGCTATGTAAGG +
Preference number: 4 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVFVVPH*LPSYVR
Trigger: CCTTACATAGCTTGGGAGTCAGTGAGGAACTACAAA...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCGGGCAATATCCACCATaGACTTCAATAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: KNGQSNCPKDQALREFLCGQYPP*TSIVSA
Trigger: TGCAGACACTATTGAAGTTCATGGTGGATATTGCCC...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGCCCCATCCCGGGGCTaGGGATCTGTAATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGAPSRG*GSVISL
Trigger: GAGAGAAATTACAGATCCGCAGCCCCGGGATGGGGC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGTGTAATTGCATGATGTaGCCCAAGCAATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLCNCMM*PKQFLP
Trigger: GGGAAGGAATTGCTTGGGGCACATCATGCAATTACA...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp GTGCAGGAGGCAATTATAGAGTCAGGGTCGATGTTCAAGTCCAGTGGAGCAAGGAGCCTATTTCATTCATaGAGGAAACACCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: VQEAIIESGSMFKSSGARSLFHS*RKHQCC
Trigger: ACAGCATTGGTGTTTCCTGCATGAATGAAATAGGCT...CCTTGCTCCACTGGACTTGAACATCGACCCTGACTCTATAATTGCCTCCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATGGGCTCCTTCAGTCGTaGTGGCTAGAATCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHGLLQS*WLESKG
Trigger: GCCCTTGGATTCTAGCCAGCACGACTGAAGGAGCCC...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGGGCTCCTTCAGTCGTaGTGGCTAGAATCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGGLLQS*WLESKG
Trigger: GCCCTTGGATTCTAGCCAGCACGACTGAAGGAGCCC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCACAGGATCTGCGTTaGCAGGCGCCGGAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELAQDLR*QAPELK
Trigger: CTTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGATGAGCACAGGATCTaGGTTGCCAGGCGCCGGAGT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEDEHRI*VARRRS
Trigger: ACTCCGGCGCCTGGCAACGCAGATCCTGTGCTCATC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGGAAGAAAATTCCTGTTaGTCAGATACTCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: ESSANKSSSGNELPKGSMEENSC*SDTPFP
Trigger: TGGGAATGGAGTATCTGAGCAACAGGAATTTTCTTC...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAGGCAGTCTTCGGGCTaGTTCAACCTGTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGRQSSG*FNLWPW
Trigger: CCATGGCCACAGGTTGAAGCAGCCCGAAGACTGCCT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAAATGGTCAGAGCAATTaGCCCAAGGACCAGGCATTA +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKNGQSN*PKDQAL
Trigger: TAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AGAAACACAGTGACATTTAAAGGTGCTACTGATGGGGCTCCTTCAGTCGTGCTGTGCAGCTGCTTGATTTaGTACAGATGTGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: RNTVTFKGATDGAPSVVLCSCLI*YRCGKA
Trigger: TGCCTTACCACATCTGTACCAAATCAAGCAGCTGCA...CAGCACGACTGAAGGAGCCCCATCAGTAGCACCTTTAAATGTCACTGTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGCTCGGCTGCCATTCTaGCCAACTTCCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWARLPF*PTSSKS
Trigger: GCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGCTCGGCTGCCATTCTaGCCAACTTCCTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGARLPF*PTSSKS
Trigger: GCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCCAAACTTTGTCTCCTaGACTCTTTTTCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLPNFVS*TLFLMA
Trigger: GGCCATCAGAAAAAGAGTCCAGGAGACAAAGTTTGG...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATGGCAGCATGCTCGAATaGGACCAGGAGACCCCATTC +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHGSMLE*DQETPF
Trigger: GAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCC...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGGCAGCATGCTCGAATaGGACCAGGAGACCCCATTC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWGSMLE*DQETPF
Trigger: GAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGGCAGCATGCTCGAATaGGACCAGGAGACCCCATTC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAGSMLE*DQETPF
Trigger: GAATGGGGTCTCCTGGTCCCATTCGAGCATGCTGCC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGAAGCAATGCCAAGAATaGTCAGAGCAATTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLKQCQE*SEQLPQ
Trigger: TTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTT...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
3UTR CAA 72 bp GGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTaGATTTTTGGAATGTCTCCCCGCACCTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GTIGFSYSRRIG*IFGMSPRTSPH
Trigger: GTGAGGAGAGGTGCGGGGAGACATTCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATCCAGGCTGGGTTGGTaGAAACATCAAGGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSRLGW*KHQGRL
Trigger: CAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGTCCAACTGTGTGTTTaGAGGCAAGAGGCGGTAGGG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWVQLCV*RQEAVG
Trigger: CCCTACCGCCTCTTGCCTTCAAACACACAGTTGGAC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR TCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAAACTGTGTAATTGCATaGTGTGCCCCAAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKNCVIA*CAPSNS
Trigger: GGAATTGCTTGGGGCACATCATGCAATTACACAGTT...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp CTGTGTATTGACGTAAATAACGTCTGCTTGGTTCCGAACGTCAGGCAAACTTTCATACGACCCATTGTCTaGACGCTGCACACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LCIDVNNVCLVPNVRQTFIRPIV*TLHTGY
Trigger: ATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTAT...GAAAGTTTGCCTGACGTTCGGAACCAAGCAGACGTTATTTACGTCAATACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGATGCTGTTACGGATGCTaGCTTCAGTTGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRCCYGC*LQLVGR
Trigger: CCTCCCCACCAACTGAAGTCAGCATCCGTAACAGCA...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGTGCTGTTACGGATGCTaGCTTCAGTTGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWCCYGC*LQLVGR
Trigger: CCTCCCCACCAACTGAAGTCAGCATCCGTAACAGCA...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCATTTTCACTGGATCACTaGAGGGCCCAACTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAFSLDH*RAQLPL
Trigger: GAGGGGGAGTTGGGCCCTTCAGTGATCCAGTGAAAA...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATTTTCACTGGATCACTaGAGGGCCCAACTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGFSLDH*RAQLPL
Trigger: GAGGGGGAGTTGGGCCCTTCAGTGATCCAGTGAAAA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAATTTGTAGTTCCTCACTaGCTCCCAAGCTATGTAAGG +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKFVVPH*LPSYVR
Trigger: CCTTACATAGCTTGGGAGTCAGTGAGGAACTACAAA...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTGCACGCTGCCTCACTaGGAAACTCCTCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELCTLPH*ETPRSP
Trigger: GGGAGATCGAGGAGTTTCTCAGTGAGGCAGCGTGCA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAATGCACGCTGCCTCACTaGGAAACTCCTCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAECTLPH*ETPRSP
Trigger: GGGAGATCGAGGAGTTTCTCAGTGAGGCAGCGTGCA...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATGTTCTTTTCAGCTGTaGCTGCAGCAGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGCSFQL*LQQRGQ
Trigger: CTGCCCCCTCTGCTGCAGTCACAGCTGAAAAGAACA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGCCCCATCCCGGGGCTaGGGATCTGTAATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEAPSRG*GSVISL
Trigger: GAGAGAAATTACAGATCCGCAGCCCCGGGATGGGGC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAATAAAACTGTGTAATTaGATGATGTGCCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTIKLCN*MMCPKQ
Trigger: TTGCTTGGGGCACATCATGCAATTACACAGTTTTAT...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGGGCTCCTTCAGTCGTaGTGGCTAGAATCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELGLLQS*WLESKG
Trigger: GCCCTTGGATTCTAGCCAGCACGACTGAAGGAGCCC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGAAATCCCTGCACTCTaGCACACGTGGGATATCCGG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWEIPAL*HTWDIR
Trigger: CCGGATATCCCACGTGTGGCAGAGTGCAGGGATTTC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAGATCCGAGCTCGGCTaGCATTCTGGCCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGRSELG*HSGQLP
Trigger: AGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGATCCGAGCTCGGCTaGCATTCTGGCCAACTTCCT +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWRSELG*HSGQLP
Trigger: AGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGCCCTCTGGTGACGGCTaGAATCCTCACTGTGCACGT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELPSGDG*NPHCAR
Trigger: ACGTGCACAGTGAGGATTGCAGCCGTCACCAGAGGG...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AGAGTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCATCCTCCTCTGTGAATaGATTCCCAAACTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: RVVQLHGLHCHFQRGPIFILLCE*IPKLCL
Trigger: GAGACAAAGTTTGGGAATGCATTCACAGAGGAGGAT...GAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCATTCCCAAGGGCAGCATaGTCGAATGGGACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAFPRAA*SNGTRR
Trigger: TCTCCTGGTCCCATTCGAGCATGCTGCCCTTGGGAA...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGTTCTCTCCGGACGGATaGACAGATGGACGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWFSPDG*TDGRPE
Trigger: TTCGGGACGTCCATCTGTCCATCCGTCCGGAGAGAA...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATTCTCTCCGGACGGATaGACAGATGGACGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGFSPDG*TDGRPE
Trigger: TTCGGGACGTCCATCTGTCCATCCGTCCGGAGAGAA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AGAAACACAGTGACATTTAAAGGTGCTACTGATGGGGCTCCTTCAGTCGTGCTGAGTTGTCCAACTTCATaGTCTTCACTGCCACTTTCA +
Preference number: 4 (lower is better)
Translates to: RNTVTFKGATDGAPSVVLSCPTS*SSLPLS
Trigger: TGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACT...CAGCACGACTGAAGGAGCCCCATCAGTAGCACCTTTAAATGTCACTGTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAAATTACCATGGGCTTTaGGATGCCTTGAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKNYHGL*DALRAH
Trigger: ATGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATT...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGATGTTCAAGTCCAGTaGAGCAAGGGTGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWDVQVQ*SKGGAL
Trigger: CAGGGCTCCACCCTTGCTCCACTGGACTTGAACATC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
3UTR CAA 72 bp GGCGATCCATTTAACAGGCATCTTAGCAATGCGGCCTaGGCGGTAATAATCGCCACTGTAAATCTTCTTAGA +
Preference number: 4 (lower is better)
Translates to: GDPFNRHLSNAA*AVIIATVNLLR
Trigger: TCTAAGAAGATTTACAGTGGCGATTATTACCGCCAAGGCCGCATTGCTAAGATGCCTGTTAAATGGATCGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTGCTGTTACGGATGCTaGCTTCAGTTGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELCCYGC*LQLVGR
Trigger: CCTCCCCACCAACTGAAGTCAGCATCCGTAACAGCA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAATTTTCACTGGATCACTaGAGGGCCCAACTCCCCCTC +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEFSLDH*RAQLPL
Trigger: GAGGGGGAGTTGGGCCCTTCAGTGATCCAGTGAAAA...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTGTTCTTTTCAGCTGTaGCTGCAGCAGAGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELCSFQL*LQQRGQ
Trigger: CTGCCCCCTCTGCTGCAGTCACAGCTGAAAAGAACA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATACCAGTTCTCCATCCTaGTGCTTAGTCGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHTSSPS*CLVGGF
Trigger: GAAGCCTCCGACTAAGCAGCAGGATGGAGAACTGGT...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAACCAGTTCTCCATCCTaGTGCTTAGTCGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGTSSPS*CLVGGF
Trigger: GAAGCCTCCGACTAAGCAGCAGGATGGAGAACTGGT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAACCAGTTCTCCATCCTaGTGCTTAGTCGGAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTATSSPS*CLVGGF
Trigger: GAAGCCTCCGACTAAGCAGCAGGATGGAGAACTGGT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAAATCCCTGCACTCTaGCACACGTGGGATATCCGG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEEIPAL*HTWDIR
Trigger: CCGGATATCCCACGTGTGGCAGAGTGCAGGGATTTC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGAAATCCCTGCACTCTaGCACACGTGGGATATCCGG +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELEIPAL*HTWDIR
Trigger: CCGGATATCCCACGTGTGGCAGAGTGCAGGGATTTC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACTCTTTGGAAATCCCTaGACTCTGCCACACGTGGGA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGLFGNP*TLPHVG
Trigger: TCCCACGTGTGGCAGAGTGCAGGGATTTCCAAAGAG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AGAAACACAGTGACATTTAAAGGTGCTACTGATGGGGCTCCTTCAGTCGTGCTGATCTACCCAACCGTGTaGAGGGATAAATATTTTCAC +
Preference number: 4 (lower is better)
Translates to: RNTVTFKGATDGAPSVVLIYPTV*RDKYFH
Trigger: GTGAAAATATTTATCCCTGCACACGGTTGGGTAGAT...CAGCACGACTGAAGGAGCCCCATCAGTAGCACCTTTAAATGTCACTGTGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTTCCCAAGGGCAGCATaGTCGAATGGGACCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELFPRAA*SNGTRR
Trigger: TCTCCTGGTCCCATTCGAGCATGCTGCCCTTGGGAA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTTCTCTCCGGACGGATaGACAGATGGACGTCCCGAA +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELFSPDG*TDGRPE
Trigger: TTCGGGACGTCCATCTGTCCATCCGTCCGGAGAGAA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAACAGGCTGGTACCCACTaGCGTGAGGAAGGGATAACA +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEQAGTH*REEGIT
Trigger: TGTTATCCCTTCCTCACGCCAGTGGGTACCAGCCTG...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATTCGACAGAGGTCACCTaGGGAATGGCTACGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHSTEVT*GMATFP
Trigger: AGGAAACGTAGCCATTCCCCAGGTGACCTCTGTCGA...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATCGACAGAGGTCACCTaGGGAATGGCTACGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSTEVT*GMATFP
Trigger: AGGAAACGTAGCCATTCCCCAGGTGACCTCTGTCGA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCACTCCTTCAGTCGTGCTaGCTAGAATCCAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTALLQSC*LESKGS
Trigger: TGAGCCCTTGGATTCTAGCCAGCACGACTGAAGGAG...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGACCTCCAAGAGCTCTTTaGAAATCCCTGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRPPRAL*KSLHSA
Trigger: GGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGG...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACCTCCAAGAGCTCTTTaGAAATCCCTGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGPPRAL*KSLHSA
Trigger: GGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAAGTTGTCCAACTTCATaGTCTTCACTGCCACTTTCA +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKSCPTS*SSLPLS
Trigger: TGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACT...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAGTCGAATGACATTTaGGTGGCTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KNGQSNCPKDQALREFLCKSNDI*VAEVFH
Trigger: ATGAAAGACTTCAGCCACCCAAATGTCATTCGACTT...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGATGTTCAAGTCCAGTaGAGCAAGGGTGGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEDVQVQ*SKGGAL
Trigger: CAGGGCTCCACCCTTGCTCCACTGGACTTGAACATC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACTGAACGCTGCACACTaGTTATGCTCTACGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGLNAAH*LCSTPE
Trigger: CTCTGGCGTAGAGCATAACCAGTGTGCAGCGTTCAG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409780.5
3UTR CAA 72 bp ATCTCTATAAAGCAATGCCAAGAATGGTCAGAGCAATaGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTG +
Preference number: 4 (lower is better)
Translates to: ISIKQCQEWSEQ*PQGPGIKGIPL
Trigger: CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAGGCTGTGTTTCTGGTaGCATTCATGCTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGRLCFW*HSCSQA
Trigger: AGCCTGAGAGCATGAATGTCACCAGAAACACAGCCT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAAGGCTGTGTTTCTGGTaGCATTCATGCTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTARLCFW*HSCSQA
Trigger: AGCCTGAGAGCATGAATGTCACCAGAAACACAGCCT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGGGCTTGCAGCTGCTTaGTTTGGTACAGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGGLAAA*FGTDVV
Trigger: TACCACATCTGTACCAAATCAAGCAGCTGCAAGCCC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGCTCGATCTCCCGCTGTaGAGAGTTGTCCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWLDLPL*RVVQLH
Trigger: ATGAAGTTGGACAACTCTTCACAGCGGGAGATCGAG...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCACTCGATCTCCCGCTGTaGAGAGTTGTCCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTALDLPL*RVVQLH
Trigger: ATGAAGTTGGACAACTCTTCACAGCGGGAGATCGAG...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGAAGTTCATCGGGCAATaGGCTTCCCAAGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELKFIGQ*ASQGQH
Trigger: ATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAAAGTTCATCGGGCAATaGGCTTCCCAAGGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEKFIGQ*ASQGQH
Trigger: ATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGGTGTGTGGTCAGTTTaGAGGCTCCCTGGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELGVWSV*RLPGKG
Trigger: ACCTTTTCCAGGGAGCCTGCAAACTGACCACACACC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGCTTTGATGTTGATCTaGACTCCCTTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGALMLI*TPLDTV
Trigger: GACCGTGTCCAAGGGAGTGCAGATCAACATCAAAGC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGCTTTGATGTTGATCTaGACTCCCTTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAALMLI*TPLDTV
Trigger: GACCGTGTCCAAGGGAGTGCAGATCAACATCAAAGC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGCTTTGATGTTGATCTaGACTCCCTTGGACACGGTC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWALMLI*TPLDTV
Trigger: GACCGTGTCCAAGGGAGTGCAGATCAACATCAAAGC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAAGCCTATTTCATTCATaGAGGAAACACCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKSLFHS*RKHQCC
Trigger: ACAGCATTGGTGTTTCCTGCATGAATGAAATAGGCT...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAGTTCTCCATCCTGCTaGTTAGTCGGAGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSSPSC*LVGGFI
Trigger: GATGAAGCCTCCGACTAAGCAGCAGGATGGAGAACT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGTTCTCCATCCTGCTaGTTAGTCGGAGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWSSPSC*LVGGFI
Trigger: GATGAAGCCTCCGACTAAGCAGCAGGATGGAGAACT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAACTCTTTGGAAATCCCTaGACTCTGCCACACGTGGGA +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAELFGNP*TLPHVG
Trigger: TCCCACGTGTGGCAGAGTGCAGGGATTTCCAAAGAG...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACTTCATGGTCTTCACTaGCACTTTCAGAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGLHGLH*HFQRGP
Trigger: GGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGCTTCATGGTCTTCACTaGCACTTTCAGAGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWLHGLH*HFQRGP
Trigger: GGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAG...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAGTCTTTCATGCACGCTaGCTCACTGAGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRVFHAR*LTEKLL
Trigger: GAGGAGTTTCTCAGTGAGGCAGCGTGCATGAAAGAC...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGTCTTTCATGCACGCTaGCTCACTGAGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWVFHAR*LTEKLL
Trigger: GAGGAGTTTCTCAGTGAGGCAGCGTGCATGAAAGAC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGAACTTCAATAGTGTCTaGAGAGGAATATGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLNFNSV*RGICFG
Trigger: ACCAAAGCATATTCCTCTGCAGACACTATTGAAGTT...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGCTTCCCATTCCTCACTaGCCCCATTCAGGATGTACC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELLPIPH*PHSGCT
Trigger: GGTACATCCTGAATGGGGGCAGTGAGGAATGGGAAG...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGGTCACCTGGGGAATaGCTACGTTTCCTGTATGTG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWRSPGE*LRFLYV
Trigger: CACATACAGGAAACGTAGCCATTCCCCAGGTGACCT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAAGGTCACCTGGGGAATaGCTACGTTTCCTGTATGTG +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTARSPGE*LRFLYV
Trigger: CACATACAGGAAACGTAGCCATTCCCCAGGTGACCT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR CCA 90 bp CAAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGGAAATTGTGGTGTCCTaGTATATATTAGGTACACTG +
Preference number: 4 (lower is better)
Translates to: QEWSEQLPQGPGIKGIPLEIVVS*YILGTL
Trigger: CAGTGTACCTAATATATACCAGGACACCACAATTTC...CAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATAGCCCTTTGTCATTGTaGGCCTCACAACTGAAGACC +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHSPLSL*ASQLKT
Trigger: GGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCT...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAAGCCCTTTGTCATTGTaGGCCTCACAACTGAAGACC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTASPLSL*ASQLKT
Trigger: GGTCTTCAGTTGTGAGGCCCACAATGACAAAGGGCT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGCTCCTTCAGTCGTGCTaGCTAGAATCCAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELLLQSC*LESKGS
Trigger: TGAGCCCTTGGATTCTAGCCAGCACGACTGAAGGAG...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAACCTCCAAGAGCTCTTTaGAAATCCCTGCACTCTGCC +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEPPRAL*KSLHSA
Trigger: GGCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGG...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTAAGTCGAATGACATTTaGGTGGCTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVKSNDI*VAEVFH
Trigger: ATGAAAGACTTCAGCCACCCAAATGTCATTCGACTT...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGTCAATACTGAAAAGGTaGGGCGGTCTAAGGGATCGG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWSILKR*GGLRDR
Trigger: CCGATCCCTTAGACCGCCCCACCTTTTCAGTATTGA...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGGTGCTTTGGGGCCATaGAGTTCACTTGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWGALGP*SSLGKE
Trigger: TTCCTTACCAAGTGAACTCCATGGCCCCAAAGCACC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAACTTATCTACAGACCCTaGTGTGGTTTTTCCATATCT +
Preference number: 4 (lower is better)
Translates to: NGQSNCPKDQALREFLCKLIYRP*CGFSIS
Trigger: AGATATGGAAAAACCACACCAGGGTCTGTAGATAAG...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAATACGACCCATTGTCTaGACGCTGCACACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAIRPIV*TLHTGY
Trigger: ATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTAT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATGGCTGCTTAGTAAAGTaGGGAAGTCCTTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHGCLVK*GSPCTS
Trigger: CGAAGTACAAGGACTTCCTCACTTTACTAAGCAGCC...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGAGGCTGTGTTTCTGGTaGCATTCATGCTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELRLCFW*HSCSQA
Trigger: AGCCTGAGAGCATGAATGTCACCAGAAACACAGCCT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGAATGCTGCAATTCCTaGACGGGGAGTATCCATCAA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGECCNS*TGSIHQ
Trigger: TTGATGGATACTCCCCGTTCAGGAATTGCAGCATTC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATCAGCTTCCTTGACCTaGATGCTGCAATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSASLT*MLQFLN
Trigger: GTTCAGGAATTGCAGCATTCAGGTCAAGGAAGCTGA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGGGCTTGCAGCTGCTTaGTTTGGTACAGATGTGGTA +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEGLAAA*FGTDVV
Trigger: TACCACATCTGTACCAAATCAAGCAGCTGCAAGCCC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAACTCGATCTCCCGCTGTaGAGAGTTGTCCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAELDLPL*RVVQLH
Trigger: ATGAAGTTGGACAACTCTTCACAGCGGGAGATCGAG...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGGCTTTGGGATGCCTTaGGAGCTCATTTCTATACAC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAGFGMP*ELISIH
Trigger: GTGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGGCTTTGGGATGCCTTaGGAGCTCATTTCTATACAC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWGFGMP*ELISIH
Trigger: GTGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGATCAGAATGCTGTGTaGAGTGCTGTTACGGATGCT +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWDQNAV*SAVTDA
Trigger: AGCATCCGTAACAGCACTGCACACAGCATTCTGATC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCCAGGGCTTGCAGCTaGTTGATTTGGTACAGATGT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELARACS*LIWYRC
Trigger: ACATCTGTACCAAATCAAGCAGCTGCAAGCCCTGGC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGCCAGGGCTTGCAGCTaGTTGATTTGGTACAGATGT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEARACS*LIWYRC
Trigger: ACATCTGTACCAAATCAAGCAGCTGCAAGCCCTGGC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGAGTTCTCCATCCTGCTaGTTAGTCGGAGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELSSPSC*LVGGFI
Trigger: GATGAAGCCTCCGACTAAGCAGCAGGATGGAGAACT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGTCTTTCATGCACGCTaGCTCACTGAGAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELVFHAR*LTEKLL
Trigger: GAGGAGTTTCTCAGTGAGGCAGCGTGCATGAAAGAC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACCATGGGCTTTGGGATaGCTTGAGAGCTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGPWALG*LESSFL
Trigger: TAGAAATGAGCTCTCAAGGCATCCCAAAGCCCATGG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGACGTAAATAACGTCTaGTTGGTTCCGAACGTCAGG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGDVNNV*LVPNVR
Trigger: CCTGACGTTCGGAACCAAGCAGACGTTATTTACGTC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGACGTAAATAACGTCTaGTTGGTTCCGAACGTCAGG +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTADVNNV*LVPNVR
Trigger: CCTGACGTTCGGAACCAAGCAGACGTTATTTACGTC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAGCTGACTTCAGTTGGTaGGGAGGGAATTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRADFSW*GGNCFD
Trigger: ATCAAAGCAATTCCCTCCCCACCAACTGAAGTCAGC...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGATGCTGACTTCAGTTaGTGGGGAGGGAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTADADFS*WGGNCF
Trigger: AAAGCAATTCCCTCCCCACCAACTGAAGTCAGCATC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACAGAGGAATATGCTTTaGTCCTGTCTCCAATCGGGA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGQRNML*SCLQSG
Trigger: TCCCGATTGGAGACAGGACCAAAGCATATTCCTCTG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAATCAATACTGAAAAGGTaGGGCGGTCTAAGGGATCGG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAESILKR*GGLRDR
Trigger: CCGATCCCTTAGACCGCCCCACCTTTTCAGTATTGA...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGGTGCTTTGGGGCCATaGAGTTCACTTGGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELGALGP*SSLGKE
Trigger: TTCCTTACCAAGTGAACTCCATGGCCCCAAAGCACC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAATTCATCTGGTGCTTTaGGGCCATGGAGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGIHLVL*GHGVHL
Trigger: CAAGTGAACTCCATGGCCCCAAAGCACCAGATGAAT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAACTGTGTAATTGCATaGTGTGCCCCAAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWNCVIA*CAPSNS
Trigger: GGAATTGCTTGGGGCACATCATGCAATTACACAGTT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGATACGACCCATTGTCTaGACGCTGCACACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELIRPIV*TLHTGY
Trigger: ATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTAT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGGCTGCTTAGTAAAGTaGGGAAGTCCTTGTACTTCG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEGCLVK*GSPCTS
Trigger: CGAAGTACAAGGACTTCCTCACTTTACTAAGCAGCC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACACGGCTACTGTTTTaGACCCAGAAAATGTTGACG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWTRLLF*TQKMLT
Trigger: CGTCAACATTTTCTGGGTTCAAAACAGTAGCCGTGT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAACACGGCTACTGTTTTaGACCCAGAAAATGTTGACG +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTATRLLF*TQKMLT
Trigger: CGTCAACATTTTCTGGGTTCAAAACAGTAGCCGTGT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTCAGCTTCCTTGACCTaGATGCTGCAATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELSASLT*MLQFLN
Trigger: GTTCAGGAATTGCAGCATTCAGGTCAAGGAAGCTGA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCACCTGGACTCTTTTTCTaGTGGCCAAGGAGATGTATA +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAPGLFF*WPRRCI
Trigger: TATACATCTCCTTGGCCATCAGAAAAAGAGTCCAGG...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATCAGAATCCTCCTCTGTaGATGCATTCCCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHQNPPL*MHSQTL
Trigger: CAAAGTTTGGGAATGCATTCACAGAGGAGGATTCTG...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACAGAATCCTCCTCTGTaGATGCATTCCCAAACTTTG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGQNPPL*MHSQTL
Trigger: CAAAGTTTGGGAATGCATTCACAGAGGAGGATTCTG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGGCTTTGGGATGCCTTaGGAGCTCATTTCTATACAC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELGFGMP*ELISIH
Trigger: GTGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGGTCCCCGTATTTCATaGAGGGTAAAATTACCATGG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGGPRIS*RVKLPW
Trigger: CCATGGTAATTTTACCCTTCATGAAATACGGGGACC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGGTCCCCGTATTTCATaGAGGGTAAAATTACCATGG +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAGPRIS*RVKLPW
Trigger: CCATGGTAATTTTACCCTTCATGAAATACGGGGACC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGGGCAATATCCACCATaGACTTCAATAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAGQYPP*TSIVSA
Trigger: TGCAGACACTATTGAAGTTCATGGTGGATATTGCCC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGGGCAATATCCACCATaGACTTCAATAGTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWGQYPP*TSIVSA
Trigger: TGCAGACACTATTGAAGTTCATGGTGGATATTGCCC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGCAGAAGAATTGGCTTaGTTTTTGGAATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGAEELA*FLECLP
Trigger: GGGGAGACATTCCAAAAATCAAGCCAATTCTTCTGC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCATGTAATTGCATGATGTaGCCCAAGCAATTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTACNCMM*PKQFLP
Trigger: GGGAAGGAATTGCTTGGGGCACATCATGCAATTACA...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGATCAGAATGCTGTGTaGAGTGCTGTTACGGATGCT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELDQNAV*SAVTDA
Trigger: AGCATCCGTAACAGCACTGCACACAGCATTCTGATC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAAATCCAAGGGCTCACTaGAGACCAGCCTATTTCATT +
Preference number: 4 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRNPRAH*RPAYFI
Trigger: AATGAAATAGGCTGGTCTGCAGTGAGCCCTTGGATT...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAATCCAAGGGCTCACTaGAGACCAGCCTATTTCATT +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWNPRAH*RPAYFI
Trigger: AATGAAATAGGCTGGTCTGCAGTGAGCCCTTGGATT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGCCATGGGCTTTGGGATaGCTTGAGAGCTCATTTCTA +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELPWALG*LESSFL
Trigger: TAGAAATGAGCTCTCAAGGCATCCCAAAGCCCATGG...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp TTTTTCCATATCTCTATAAAGCAATGCCAAGAATGGTCAGAGCAATTGCCCCAATGTGTAGACTCGGTCTaGAAGACTTTCTATGGCGAT +
Preference number: 4 (lower is better)
Translates to: FFHISIKQCQEWSEQLPQCVDSV*KTFYGD
Trigger: ATCGCCATAGAAAGTCTTGCAGACCGAGTCTACACA...TTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGATATGGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGTCCTTCATGAGGTTTaGTGTCATGAACTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGVLHEV*CHELLL
Trigger: CAGCAGAAGTTCATGACAGCAAACCTCATGAAGGAC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGTCCTTCATGAGGTTTaGTGTCATGAACTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWVLHEV*CHELLL
Trigger: CAGCAGAAGTTCATGACAGCAAACCTCATGAAGGAC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGACAACATTCATCTGGTaGTTTGGGGCCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELTTFIW*FGAMEF
Trigger: GAACTCCATGGCCCCAAAGCACCAGATGAATGTTGT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAACAACATTCATCTGGTaGTTTGGGGCCATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAETTFIW*FGAMEF
Trigger: GAACTCCATGGCCCCAAAGCACCAGATGAATGTTGT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTTAAGGGAATTCCTTTaGAAAGGCCACAAGGCCGCT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELLREFL*KGHKAA
Trigger: AGCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGCTGACTTCAGTTGGTaGGGAGGGAATTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEADFSW*GGNCFD
Trigger: ATCAAAGCAATTCCCTCCCCACCAACTGAAGTCAGC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTGACTTCAGTTGGTaGGGAGGGAATTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELADFSW*GGNCFD
Trigger: ATCAAAGCAATTCCCTCCCCACCAACTGAAGTCAGC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGATGCTGACTTCAGTTaGTGGGGAGGGAATTGCTTT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELDADFS*WGGNCF
Trigger: AAAGCAATTCCCTCCCCACCAACTGAAGTCAGCATC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGTGCAGCTGCTTGATTTaGTACAGATGTGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWCSCLI*YRCGKA
Trigger: TGCCTTACCACATCTGTACCAAATCAAGCAGCTGCA...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCATGCAGCTGCTTGATTTaGTACAGATGTGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTACSCLI*YRCGKA
Trigger: TGCCTTACCACATCTGTACCAAATCAAGCAGCTGCA...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCACCAAACTTTGTCTCCTaGACTCTTTTTCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAPNFVS*TLFLMA
Trigger: GGCCATCAGAAAAAGAGTCCAGGAGACAAAGTTTGG...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGCCAAACTTTGTCTCCTaGACTCTTTTTCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWPNFVS*TLFLMA
Trigger: GGCCATCAGAAAAAGAGTCCAGGAGACAAAGTTTGG...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAATTACCATGGGCTTTaGGATGCCTTGAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGNYHGL*DALRAH
Trigger: ATGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAATTGGCTTGATTTTTaGAATGTCTCCCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGNWLDF*NVSPHL
Trigger: GAGGTGCGGGGAGACATTCCAAAAATCAAGCCAATT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAAATTGGCTTGATTTTTaGAATGTCTCCCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTANWLDF*NVSPHL
Trigger: GAGGTGCGGGGAGACATTCCAAAAATCAAGCCAATT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAATTCATCTGGTGCTTTaGGGCCATGGAGTTCACTTG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEIHLVL*GHGVHL
Trigger: CAAGTGAACTCCATGGCCCCAAAGCACCAGATGAAT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATTTAACAACATTCATCTaGTGCTTTGGGGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHLTTFI*CFGAME
Trigger: CTCCATGGCCCCAAAGCACCAGATGAATGTTGTTAA...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGTTAAAAATCATGACTaGGCCATTACTCAGCGGATC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWVKNHD*AITQRI
Trigger: GATCCGCTGAGTAATGGCTCAGTCATGATTTTTAAC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGTTAAAAATCATGACTaGGCCATTACTCAGCGGATC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAVKNHD*AITQRI
Trigger: GATCCGCTGAGTAATGGCTCAGTCATGATTTTTAAC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAACCTGGACTCTTTTTCTaGTGGCCAAGGAGATGTATA +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEPGLFF*WPRRCI
Trigger: TATACATCTCCTTGGCCATCAGAAAAAGAGTCCAGG...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAATTTGTAGTTCCTCACTaGCTCCCAAGCTATGTAAGG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEFVVPH*LPSYVR
Trigger: CCTTACATAGCTTGGGAGTCAGTGAGGAACTACAAA...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWAAKSR*RKFLLL
Trigger: GAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCAGAAGAATTGGCTTaGTTTTTGGAATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELAEELA*FLECLP
Trigger: GGGGAGACATTCCAAAAATCAAGCCAATTCTTCTGC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAAATCCAAGGGCTCACTaGAGACCAGCCTATTTCATT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAENPRAH*RPAYFI
Trigger: AATGAAATAGGCTGGTCTGCAGTGAGCCCTTGGATT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAATCCTCCTCTGTGAATaGATTCCCAAACTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAILLCE*IPKLCL
Trigger: GAGACAAAGTTTGGGAATGCATTCACAGAGGAGGAT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGAGGTCCCATCTTCCTaGTTAAGATTTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWEVPSS*LRFPSI
Trigger: AATGGAAGGAAATCTTAAGCAGGAAGATGGGACCTC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAGGTCCCATCTTCCTaGTTAAGATTTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAEVPSS*LRFPSI
Trigger: AATGGAAGGAAATCTTAAGCAGGAAGATGGGACCTC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCATGTCATCTCGCAACATaGAGTTTCGAGCAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTACHLAT*SFEQLN
Trigger: ATTTAGCTGCTCGAAACTGCATGTTGCGAGATGACA...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGTGTCATCTCGCAACATaGAGTTTCGAGCAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWCHLAT*SFEQLN
Trigger: ATTTAGCTGCTCGAAACTGCATGTTGCGAGATGACA...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTGTGTAGACTCGGTCTaGAAGACTTTCTATGGCGAT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELCVDSV*KTFYGD
Trigger: ATCGCCATAGAAAGTCTTGCAGACCGAGTCTACACA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAATGTGTAGACTCGGTCTaGAAGACTTTCTATGGCGAT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAECVDSV*KTFYGD
Trigger: ATCGCCATAGAAAGTCTTGCAGACCGAGTCTACACA...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGTCCTTCATGAGGTTTaGTGTCATGAACTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEVLHEV*CHELLL
Trigger: CAGCAGAAGTTCATGACAGCAAACCTCATGAAGGAC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGTACTTCGATGTAGATaGGATCAGACACGATCTCTT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAVLRCR*DQTRSL
Trigger: AAGAGATCGTGTCTGATCCCATCTACATCGAAGTAC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTGCAGCTGCTTGATTTaGTACAGATGTGGTAAGGCA +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELCSCLI*YRCGKA
Trigger: TGCCTTACCACATCTGTACCAAATCAAGCAGCTGCA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGCCAAACTTTGTCTCCTaGACTCTTTTTCTGATGGCC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELPNFVS*TLFLMA
Trigger: GGCCATCAGAAAAAGAGTCCAGGAGACAAAGTTTGG...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAGTTGTCCAACTTCATaGTCTTCACTGCCACTTTCA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSCPTS*SSLPLS
Trigger: TGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGTTGTCCAACTTCATaGTCTTCACTGCCACTTTCA +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWSCPTS*SSLPLS
Trigger: TGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAACGAATGACATTTGGGTaGCTGAAGTCTTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAERMTFG*LKSFMH
Trigger: GTGCATGAAAGACTTCAGCCACCCAAATGTCATTCG...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGCGAATGACATTTGGGTaGCTGAAGTCTTTCATGCAC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELRMTFG*LKSFMH
Trigger: GTGCATGAAAGACTTCAGCCACCCAAATGTCATTCG...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAAATTACCATGGGCTTTaGGATGCCTTGAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAENYHGL*DALRAH
Trigger: ATGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTTAACAACATTCATCTaGTGCTTTGGGGCCATGGAG +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELLTTFI*CFGAME
Trigger: CTCCATGGCCCCAAAGCACCAGATGAATGTTGTTAA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
CDS-3UTR TCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGTTAAAAATCATGACTaGGCCATTACTCAGCGGATC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELVKNHD*AITQRI
Trigger: GATCCGCTGAGTAATGGCTCAGTCATGATTTTTAAC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR TCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTC +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEAAKSR*RKFLLL
Trigger: GAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGGAAGCGATTATTaGTGTAACTTCATCATCTGG +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAEGSDY*CNFIIW
Trigger: CCAGATGATGAAGTTACAGCAATAATCGCTTCCTTC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR GCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGAAGGAAGCGATTATTaGTGTAACTTCATCATCTGG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWEGSDY*CNFIIW
Trigger: CCAGATGATGAAGTTACAGCAATAATCGCTTCCTTC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAGCCTATTTCATTCATaGAGGAAACACCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSLFHS*RKHQCC
Trigger: ACAGCATTGGTGTTTCCTGCATGAATGAAATAGGCT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAATCTACCCAACCGTGTaGAGGGATAAATATTTTCAC +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAIYPTV*RDKYFH
Trigger: GTGAAAATATTTATCCCTGCACACGGTTGGGTAGAT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGATCCTCCTCTGTGAATaGATTCCCAAACTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELILLCE*IPKLCL
Trigger: GAGACAAAGTTTGGGAATGCATTCACAGAGGAGGAT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGAAGAAAATTCCTGTTaGTCAGATACTCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGEENSC*SDTPFP
Trigger: TGGGAATGGAGTATCTGAGCAACAGGAATTTTCTTC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGTACTTCGATGTAGATaGGATCAGACACGATCTCTT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELVLRCR*DQTRSL
Trigger: AAGAGATCGTGTCTGATCCCATCTACATCGAAGTAC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAAAGTCGAATGACATTTaGGTGGCTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAKSNDI*VAEVFH
Trigger: ATGAAAGACTTCAGCCACCCAAATGTCATTCGACTT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAAGTCGAATGACATTTaGGTGGCTGAAGTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGKSNDI*VAEVFH
Trigger: ATGAAAGACTTCAGCCACCCAAATGTCATTCGACTT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAAACATCAGGTACAATTaGATTCTCCTACAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRNIRYN*ILLQQK
Trigger: CTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAACATCAGGTACAATTaGATTCTCCTACAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWNIRYN*ILLQQK
Trigger: CTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACTACAGACCCTGGTGTaGTTTTTCCATATCTCTATA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGLQTLV*FFHISI
Trigger: TATAGAGATATGGAAAAACCACACCAGGGTCTGTAG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR GCA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAATAAAACTGTGTAATTaGATGATGTGCCCCAAGCAA +
Preference number: 4 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAIKLCN*MMCPKQ
Trigger: TTGCTTGGGGCACATCATGCAATTACACAGTTTTAT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAAGCCTATTTCATTCATaGAGGAAACACCAATGCTGT +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAESLFHS*RKHQCC
Trigger: ACAGCATTGGTGTTTCCTGCATGAATGAAATAGGCT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGATCTACCCAACCGTGTaGAGGGATAAATATTTTCAC +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELIYPTV*RDKYFH
Trigger: GTGAAAATATTTATCCCTGCACACGGTTGGGTAGAT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAAGAAAATTCCTGTTaGTCAGATACTCCATTCCCA +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEEENSC*SDTPFP
Trigger: TGGGAATGGAGTATCTGAGCAACAGGAATTTTCTTC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAATCTCTATAAAGCAATaGCAAGAATGGTCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGISIKQ*QEWSEQ
Trigger: TTGCTCTGACCATTCTTGGCATTGCTTTATAGAGAT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAAACATCAGGTACAATTaGATTCTCCTACAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAENIRYN*ILLQQK
Trigger: CTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR GCA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGAACTTCAATAGTGTCTaGAGAGGAATATGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELNFNSV*RGICFG
Trigger: ACCAAAGCATATTCCTCTGCAGACACTATTGAAGTT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CCA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAAATTGTGGTGTCCTaGTATATATTAGGTACACTG +
Preference number: 4 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEEIVVS*YILGTL
Trigger: CAGTGTACCTAATATATACCAGGACACCACAATTTC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS TCA 90 bp GGCTGGGTTGGTGAAAACATCAAGGCAGGCTGGTACCCACTGGCGTaGGGAAGGGATAACAGCGGTGTGTGGTCAGTTTGCAGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GWVGENIKAGWYPLA*GRDNSGVWSVCRLP
Trigger: AGGGAGCCTGCAAACTGACCACACACCGCTGTTATCCCTTCCTCACGCCAGTGGGTACCAGCCTGCCTTGATGTTTTCACCAACCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
ENST00000616902.4
CDS-3UTR CAA 90 bp ACGGCTACTGTTTTGAACCCAGAAAATGTTGACGGGCTCAGGCGGGCCCACAGCCGGTGTGTGGTCAGTTaGCAGGCTCCCTGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: TATVLNPENVDGLRRAHSRCVVS*QAPWKR
Trigger: CCTTTTCCAGGGAGCCTGCAAACTGACCACACACCG...GCTGTGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTCAAAACAGTAGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS GCA 90 bp ACAAATGGGCAATTTCATCTGCAACCTCGACCTCCCCTCTGCACATaGCCACCTGGCTTCGGGCTGCTTCAACCTGTGGCCATGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TNGQFHLQPRPPLCT*PPGFGLLQPVAMEK
Trigger: CTTCTCCATGGCCACAGGTTGAAGCAGCCCGAAGCCAGGTGGGCATGTGCAGAGGGGAGGTCGAGGTTGCAGATGAAATTGCCCATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS CCA 90 bp TTCCAGGCTGGGTTGGTGAAAACATCAAGGCAGGCTGGTACCCACTaGCGTGAGGAAGGGATAACAGCGGTGTGTGGTCAGTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: FQAGLVKTSRQAGTH*REEGITAVCGQFAG
Trigger: GCCTGCAAACTGACCACACACCGCTGTTATCCCTTCCTCACGCCAGTGGGTACCAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
ENST00000616902.4
CDS TCA 90 bp GGGAATGGCTACGTTTCCTGTATGTGGTCTTCCAGGCTGGGTTGGTaGAAACATCAAGGCAGGCTGGTACCCACTGGCGTGAGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: GNGYVSCMWSSRLGW*KHQGRLVPTGVRKG
Trigger: TCCCTTCCTCACGCCAGTGGGTACCAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGAAGACCACATACAGGAAACGTAGCCATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
ENST00000616902.4
CDS-3UTR CAA 90 bp ACGGCTACTGTTTTGAACCCAGAAAATGTTGACGGGCTCAGGCGGGCCCACAGCGGGGAGGGAATTGCTTaGATGTTGATCTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: TATVLNPENVDGLRRAHSGEGIA*MLICTP
Trigger: GGGAGTGCAGATCAACATCAAAGCAATTCCCTCCCC...GCTGTGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTCAAAACAGTAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp ACGGCTACTGTTTTGAACCCAGAAAATGTTGACGGGCTCAGGCGGGCCCACAGCTCCTCCAAGAGCTCTTaGGAAATCCCTGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: TATVLNPENVDGLRRAHSSSKSS*EIPALC
Trigger: GCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGA...GCTGTGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTCAAAACAGTAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS CCA 90 bp CAAGAGGCGGTAGGGGCTTTGATTCGACAGAGGTCACCTGGGGAATaGCTACGTTTCCTGTATGTGGTCTTCCAGGCTGGGTTGGTGAAA +
Preference number: 5 (lower is better)
Translates to: QEAVGALIRQRSPGE*LRFLYVVFQAGLVK
Trigger: TTTCACCAACCCAGCCTGGAAGACCACATACAGGAAACGTAGCCATTCCCCAGGTGACCTCTGTCGAATCAAAGCCCCTACCGCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS CCA 90 bp TTGAAGGCAAGAGGCGGTAGGGGCTTTGATTCGACAGAGGTCACCTaGGGAATGGCTACGTTTCCTGTATGTGGTCTTCCAGGCTGGGTT +
Preference number: 5 (lower is better)
Translates to: LKARGGRGFDSTEVT*GMATFPVCGLPGWV
Trigger: AACCCAGCCTGGAAGACCACATACAGGAAACGTAGCCATTCCCCAGGTGACCTCTGTCGAATCAAAGCCCCTACCGCCTCTTGCCTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS-3UTR CAA 90 bp CCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGCAGGAATTGCTTTGATGTaGATCTGCACTCCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: PRTSPHIRTSEPSEESSAGIALM*ICTPLD
Trigger: GTCCAAGGGAGTGCAGATCAACATCAAAGCAATTCC...TGCTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp ACGGCTACTGTTTTGAACCCAGAAAATGTTGACGGGCTCAGGCGGGCCCACAGCCATTCATCTGGTGCTTaGGGGCCATGGAGTTCACTT +
Preference number: 5 (lower is better)
Translates to: TATVLNPENVDGLRRAHSHSSGA*GPWSSL
Trigger: AAGTGAACTCCATGGCCCCAAAGCACCAGATGAATG...GCTGTGGGCCCGCCTGAGCCCGTCAACATTTTCTGGGTTCAAAACAGTAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS GCA 90 bp AGAGGCCGAAGTCCGCAACACAGACAGTCATGTCATCTCGCAACCTaGAGTAAGAGCAAGATGCTGGGCTTCTTGCTAAGATGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: RGRSPQHRQSCHLAT*SKSKMLGFLLRWPG
Trigger: ACCTGGCCATCTTAGCAAGAAGCCCAGCATCTTGCTCTTACTGCAGGTTGCGAGATGACATGACTGTCTGTGTTGCGGACTTCGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449344.2
CDS-3UTR CAA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACGACACGGTCAGCCCTTaGTCATTGTGGGCCTCACAA +
Preference number: 5 (lower is better)
Translates to: QSNCPKDQALREFLCKGHDTVSP*SLWASQ
Trigger: TTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTC...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp GATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGGAAATCGTAGCATTGTGGACTaGAACAGAGATCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: DPSSAAILANFLQELFGNRSIVD*NRDPSS
Trigger: CGAGCTCGGATCTCTGTTCAAGTCCACAATGCTACG...ATTTCCAAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAGCACAGGATCTGCGTaGCCAGGCGCCGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: KNGQSNCPKDQALREFLCSTGSA*PGAGVE
Trigger: TTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGCT...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp AACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTGCAGAGGAATATGCTTaGGTCCTGTCTCCAATCGGG +
Preference number: 5 (lower is better)
Translates to: NRDPSSAAILANFLQELFAEEYA*VLSPIG
Trigger: CCCGATTGGAGACAGGACCAAAGCATATTCCTCTGC...AAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS TCA 90 bp GCCAAAGATGATGAGCACAGGATCTGCGTTGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTACCCAACTTGTAACAGGGAAGAACAA +
Preference number: 5 (lower is better)
Translates to: AKDDEHRICVARRRS*RGGIIYPTCNREEQ
Trigger: TTGTTCTTCCCTGTTACAAGTTGGGTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGCTCATCATCTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS CCA 90 bp CAGTATGCAATCTCTGCCTCCGTGTGCAGGGATAAATATTTTCACTaGATCACTGAAGGGCCCAACTCCCCCTCTGGTGACGGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: QYAISASVCRDKYFH*ITEGPNSPSGDGCN
Trigger: ATTGCAGCCGTCACCAGAGGGGGAGTTGGGCCCTTCAGTGATCCAGTGAAAATATTTATCCCTGCACACGGAGGCAGAGATTGCATACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS-3UTR CAA 90 bp AACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGCTCTTTTCCCGCTGTGAAGAGTaGTCCAACTTCATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: NRDPSSAAILANFLQELFSRCEE*SNFMVF
Trigger: GAAGACCATGAAGTTGGACAACTCTTCACAGCGGGA...AAAGAGCTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp GACTTGAACAGAGATCCGAGCTCGGCTGCCATTCTGGCCAACTTCCTCCAAGAGGTAAATAACGTCTGCTaGGTTCCGAACGTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: DLNRDPSSAAILANFLQEVNNVC*VPNVRQ
Trigger: TTGCCTGACGTTCGGAACCAAGCAGACGTTATTTAC...CTCTTGGAGGAAGTTGGCCAGAATGGCAGCCGAGCTCGGATCTCTGTTCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp AGAGTTGTCCAACTTCATGGTCTTCACTGCCACTTTCAGAGAGGTCCCATCTTCGACACGGTCAGCCCTTaGTCATTGTGGGCCTCACAA +
Preference number: 5 (lower is better)
Translates to: RVVQLHGLHCHFQRGPIFDTVSP*SLWASQ
Trigger: TTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTC...GAAGATGGGACCTCTCTGAAAGTGGCAGTGAAGACCATGAAGTTGGACAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCTTGATCTGCACTCCCTaGGACACGGTCAGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: KNGQSNCPKDQALREFLCLICTP*DTVSPL
Trigger: CAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAA...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp CCCCGCACCTCTCCTCACATCAGGACTTCTGAGCCTTCTGAGGAGTCGTCAGCAAAACATCAGGTACAATaGGATTCTCCTACAGCAGAA +
Preference number: 5 (lower is better)
Translates to: PRTSPHIRTSEPSEESSAKHQVQ*DSPTAE
Trigger: TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTT...TGCTGACGACTCCTCAGAAGGCTCAGAAGTCCTGATGTGAGGAGAGGTGCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS CCA 90 bp GCCCTGCAAGGTAAGGACTGCAAGTTCTGTCTGCCAAGGCTTGAATaGGTAAAAACATGGCAAAGCAGTATGCAATCTCTGCCTCCGTGT +
Preference number: 5 (lower is better)
Translates to: ALQGKDCKFCLPRLE*VKTWQSSMQSLPPC
Trigger: ACACGGAGGCAGAGATTGCATACTGCTTTGCCATGTTTTTACCCATTCAAGCCTTGGCAGACAGAACTTGCAGTCCTTACCTTGCAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS-3UTR CAA 90 bp CAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGGCCACGGAATTGCTTTGATGTaGATCTGCACTCCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: QSNCPKDQALREFLCKGHGIALM*ICTPLD
Trigger: GTCCAAGGGAGTGCAGATCAACATCAAAGCAATTCC...GTGGCCTTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp AGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACAGTAATTAGCCAGGGCTaGCAGCTGCTTGATTTGGTA +
Preference number: 5 (lower is better)
Translates to: RPQGRCRPLSFKSQVSSTVISQG*QLLDLV
Trigger: TACCAAATCAAGCAGCTGCAAGCCCTGGCTAATTAC...TGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp GAGTCGTCAGCAAACAAAAGTTCATCGGGCAATGAGCTTCCCAAGGGCAGCATGGTAATTAGCCAGGGCTaGCAGCTGCTTGATTTGGTA +
Preference number: 5 (lower is better)
Translates to: ESSANKSSSGNELPKGSMVISQG*QLLDLV
Trigger: TACCAAATCAAGCAGCTGCAAGCCCTGGCTAATTAC...CATGCTGCCCTTGGGAAGCTCATTGCCCGATGAACTTTTGTTTGCTGACGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp GAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAACGTAGCATTGTGGACTaGAACAGAGATCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: EWSEQLPQGPGIKGIPLQRSIVD*NRDPSS
Trigger: CGAGCTCGGATCTCTGTTCAAGTCCACAATGCTACG...TTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp ATTCCTTTGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAAGGGCTTTGGGATGCCTaGAGAGCTCATTTCTATACA +
Preference number: 5 (lower is better)
Translates to: IPLQRPQGRCRPLSFKSQGLWDA*RAHFYT
Trigger: TGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCCC...TTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp GAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAACTTAGCAATGCGGCCTaGGCGGTAATAATCGCCACT +
Preference number: 5 (lower is better)
Translates to: EWSEQLPQGPGIKGIPLQLSNAA*AVIIAT
Trigger: AGTGGCGATTATTACCGCCAAGGCCGCATTGCTAAG...TTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAGGGCTTGCAGCTGCTaGATTTGGTACAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: KNGQSNCPKDQALREFLCRACSC*IWYRCG
Trigger: ACCACATCTGTACCAAATCAAGCAGCTGCAAGCCCT...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTAGGGCTTGCAGCTGCTaGATTTGGTACAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVRACSC*IWYRCG
Trigger: ACCACATCTGTACCAAATCAAGCAGCTGCAAGCCCT...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAGAATGGTCAGAGCAATaGCCCCAAGGACCAGGCATT +
Preference number: 5 (lower is better)
Translates to: NGQSNCPKDQALREFLCKEWSEQ*PQGPGI
Trigger: AATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTC...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS TCA 90 bp CTCTTCATTGTTTATTTTCATCTTACAGATATACGACCCATTGTCTaGACGCTGCACACTGGTTATGCTCTACGCCAGAGCGCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LFIVYFHLTDIRPIV*TLHTGYALRQSAGR
Trigger: CCTCCCCGCGCTCTGGCGTAGAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409780.5
CDS CCA 90 bp ACAGCATCAATCATGCATAACCCTAGAAGTCGAATGACATTTGGGTaGCTGAAGTCTTTCATGCACGCTGCCTCACTGAGAAACTCCTCG +
Preference number: 5 (lower is better)
Translates to: TASIMHNPRSRMTFG*LKSFMHAASLRNSS
Trigger: CGAGGAGTTTCTCAGTGAGGCAGCGTGCATGAAAGACTTCAGCCACCCAAATGTCATTCGACTTCTAGGGTTATGCATGATTGATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS-3UTR CAA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAACAGATATACGACCCATaGTCTGAACGCTGCACACTG +
Preference number: 5 (lower is better)
Translates to: NGQSNCPKDQALREFLCKQIYDP*SERCTL
Trigger: CAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTG...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAGCACAGGATCTGCGTaGCCAGGCGCCGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSTGSA*PGAGVE
Trigger: TTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGCT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGCACAGGATCTGCGTaGCCAGGCGCCGGAGTTGAA +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWSTGSA*PGAGVE
Trigger: TTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGCT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGAATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAATTACCATGGGCTTaGGGATGCCTTGAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: KNGQSNCPKDQALREFLCKLPWA*GCLESS
Trigger: TGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATTT...GCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS TCA 90 bp AAGATGGCCAGGTGGGTGATGCAGTTTCGAGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTCAGATACTCCATTCCCAGGGCAATA +
Preference number: 5 (lower is better)
Translates to: KMARWVMQFRAAKSR*RKFLLLRYSIPRAI
Trigger: TATTGCCCTGGGAATGGAGTATCTGAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGCTCGAAACTGCATCACCCACCTGGCCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449344.2
CDS TCA 90 bp AGTAAGAGCAAGATGCTGGGCTTCTTGCTAAGATGGCCAGGTGGGTaGTGCAGTTTCGAGCAGCTAAATCTCGATGAAGAAAATTCCTGT +
Preference number: 5 (lower is better)
Translates to: SKSKMLGFLLRWPGG*CSFEQLNLDEENSC
Trigger: ACAGGAATTTTCTTCATCGAGATTTAGCTGCTCGAAACTGCATCACCCACCTGGCCATCTTAGCAAGAAGCCCAGCATCTTGCTCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449344.2
CDS CCA 90 bp AAGGACTGCAAGTTCTGTCTGCCAAGGCTTGAATGGGTAAAAACATaGCAAAGCAGTATGCAATCTCTGCCTCCGTGTGCAGGGATAAAT +
Preference number: 5 (lower is better)
Translates to: KDCKFCLPRLEWVKT*QSSMQSLPPCAGIN
Trigger: ATTTATCCCTGCACACGGAGGCAGAGATTGCATACTGCTTTGCCATGTTTTTACCCATTCAAGCCTTGGCAGACAGAACTTGCAGTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS CCA 90 bp AACTTTCTAAGAGTTTTTCTAGCTGCAGCCTCAATACTGAAAAGGTaGGGCGGTCAGGGATCGGTTCTCCAGCAAGAGTACATCTCTTTG +
Preference number: 5 (lower is better)
Translates to: NFLRVFLAAASILKR*GGQGSVLQQEYISL
Trigger: CAAAGAGATGTACTCTTGCTGGAGAACCGATCCCTGACCGCCCCACCTTTTCAGTATTGAGGCTGCAGCTAGAAAAACTCTTAGAAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCACGGTGTGTGGTCAGTTaGCAGGCTCCCTGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTARCVVS*QAPWKR
Trigger: CCTTTTCCAGGGAGCCTGCAAACTGACCACACACCG...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGAGGCGGTAGGGGCTTaGATTCGACAGAGGTCACCT +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGEAVGA*IRQRSP
Trigger: AGGTGACCTCTGTCGAATCAAAGCCCCTACCGCCTC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR CAA 90 bp ATTCCTTTGCAAAGGCCACAAGGCCGCTGCCGACCACTGTCTTTCAAGTCTCAACTTTCCACCAAGAAATaGTGGTGTCCTGGTATATAT +
Preference number: 5 (lower is better)
Translates to: IPLQRPQGRCRPLSFKSQLSTKK*WCPGIY
Trigger: ATATATACCAGGACACCACAATTTCTTGGTGGAAAG...TTGAGACTTGAAAGACAGTGGTCGGCAGCGGCCTTGTGGCCTTTGCAAAGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp GCCCTCAGAGCTCTCCAGCAACTGTGTATTGACGTAAATAACGTCTGCTTGGTTAAAGTGAGGAAGTCCTaGTACTTCGATGTAGATGGG +
Preference number: 5 (lower is better)
Translates to: ALRALQQLCIDVNNVCLVKVRKS*YFDVDG
Trigger: CCCATCTACATCGAAGTACAAGGACTTCCTCACTTT...AACCAAGCAGACGTTATTTACGTCAATACACAGTTGCTGGAGAGCTCTGAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATTGCCAGGCGCCGGAGTaGAAGAGGGGGCATAATCTA +
Preference number: 5 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHCQAPE*KRGHNL
Trigger: TAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCA...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGTGCCAGGCGCCGGAGTaGAAGAGGGGGCATAATCTA +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWCQAPE*KRGHNL
Trigger: TAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCA...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp TGGGGCGGTCTAAGGGATCGGTTCTCCAGCAAGAGTACATTATTTCATACAGTTGGGCTTTGGGATGCCTaGAGAGCTCATTTCTATACA +
Preference number: 5 (lower is better)
Translates to: WGGLRDRFSSKSTLFHTVGLWDA*RAHFYT
Trigger: TGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCCC...AACTGTATGAAATAATGTACTCTTGCTGGAGAACCGATCCCTTAGACCGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp CTGAATGCTGCAATTCCTGAACGGGGAGTATCCATCAAAACCAGGAACCCAGGAACACATCACTTTTACTaGTGTAGACTCGGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: LNAAIPERGVSIKTRNPGTHHFY*CRLGLQ
Trigger: TTGCAGACCGAGTCTACACAAGTAAAAGTGATGTGT...TCCTGGGTTCCTGGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAGGCGGTAGGGGCTTaGATTCGACAGAGGTCACCT +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEEAVGA*IRQRSP
Trigger: AGGTGACCTCTGTCGAATCAAAGCCCCTACCGCCTC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR CAA 90 bp AATGGTCAGAGCAATTGCCCCAAGGACCAGGCATTAAGGGAATTCCTTTGCAAAAAAGTGAGGAAGTCCTaGTACTTCGATGTAGATGGG +
Preference number: 5 (lower is better)
Translates to: NGQSNCPKDQALREFLCKKVRKS*YFDVDG
Trigger: CCCATCTACATCGAAGTACAAGGACTTCCTCACTTT...TTTGCAAAGGAATTCCCTTAATGCCTGGTCCTTGGGGCAATTGCTCTGACCATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGACACGGTCAGCCCTTaGTCATTGTGGGCCTCACAA +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWDTVSP*SLWASQ
Trigger: TTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATTGATCTGCACTCCCTaGGACACGGTCAGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGLICTP*DTVSPL
Trigger: CAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCATTGATCTGCACTCCCTaGGACACGGTCAGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTALICTP*DTVSPL
Trigger: CAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAA...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGTTGATCTGCACTCCCTaGGACACGGTCAGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWLICTP*DTVSPL
Trigger: CAAAGGGCTGACCGTGTCCAAGGGAGTGCAGATCAA...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGTGCCAGGCGCCGGAGTaGAAGAGGGGGCATAATCTA +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELCQAPE*KRGHNL
Trigger: TAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCA...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAATGCCAGGCGCCGGAGTaGAAGAGGGGGCATAATCTA +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAECQAPE*KRGHNL
Trigger: TAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCA...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AGCTTCCTTGACCTGAATGCTGCAATTCCTGAACGGGGAGTATCCATCAAAACCATGCATTCCCAAACTTaGTCTCCTGGACTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SFLDLNAAIPERGVSIKTMHSQT*SPGLFF
Trigger: GAAAAAGAGTCCAGGAGACAAAGTTTGGGAATGCAT...GGTTTTGATGGATACTCCCCGTTCAGGAATTGCAGCATTCAGGTCAAGGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp GCTCTCAGGCTGCTTAGTAAAGTGAGGAAGTCCTTGTACTTCGATGTAGATGGGAGCAGAAGAATTGGCTaGATTTTTGGAATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: ALRLLSKVRKSLYFDVDGSRRIG*IFGMSP
Trigger: GGGAGACATTCCAAAAATCAAGCCAATTCTTCTGCT...CCCATCTACATCGAAGTACAAGGACTTCCTCACTTTACTAAGCAGCCTGAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS GCA 90 bp ATTTCTTTATTTTGTAAAATGTCATGTGGGTTTGTCCTGGAGCCCTaGAAGGTAAGGACTGCAAGTTCTGTCTGCCAAGGCTTGAATGGG +
Preference number: 5 (lower is better)
Translates to: ISLFCKMSCGFVLEP*KVRTASSVCQGLNG
Trigger: CCCATTCAAGCCTTGGCAGACAGAACTTGCAGTCCTTACCTTGCAGGGCTCCAGGACAAACCCACATGACATTTTACAAAATAAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATGTCCAACTGTGTGTTaGAAGGCAAGAGGCGGTAGG +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGCPTVC*KARGGR
Trigger: CCTACCGCCTCTTGCCTTCAAACACACAGTTGGACA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGTCAGCCCTTTGTCATaGTGGGCCTCACAACTGAAG +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWVSPLS*WASQLK
Trigger: CTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGAC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGACACGGTCAGCCCTTaGTCATTGTGGGCCTCACAA +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELDTVSP*SLWASQ
Trigger: TTGTGAGGCCCACAATGACAAAGGGCTGACCGTGTC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGGGGAGGGAATTGCTTaGATGTTGATCTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWGEGIA*MLICTP
Trigger: GGGAGTGCAGATCAACATCAAAGCAATTCCCTCCCC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGGGGAGGGAATTGCTTaGATGTTGATCTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAGEGIA*MLICTP
Trigger: GGGAGTGCAGATCAACATCAAAGCAATTCCCTCCCC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp CCGACCACTGTCTTTCAAGTCTCAAGTAAGTTCAACATATCCTTCCTTATTCATTCCTCCAAGAGCTCTTaGGAAATCCCTGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: PTTVFQVSSKFNISFLIHSSKSS*EIPALC
Trigger: GCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGA...ATGAATAAGGAAGGATATGTTGAACTTACTTGAGACTTGAAAGACAGTGGTCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATCCTCCAAGAGCTCTTaGGAAATCCCTGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSSKSS*EIPALC
Trigger: GCAGAGTGCAGGGATTTCCAAAGAGCTCTTGGAGGA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACGTAGCATTGTGGACTaGAACAGAGATCCGAGCTCG +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGRSIVD*NRDPSS
Trigger: CGAGCTCGGATCTCTGTTCAAGTCCACAATGCTACG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGCAGAGGAATATGCTTaGGTCCTGTCTCCAATCGGG +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWAEEYA*VLSPIG
Trigger: CCCGATTGGAGACAGGACCAAAGCATATTCCTCTGC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGCAGAGGAATATGCTTaGGTCCTGTCTCCAATCGGG +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAAEEYA*VLSPIG
Trigger: CCCGATTGGAGACAGGACCAAAGCATATTCCTCTGC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCACTTAGCAATGCGGCCTaGGCGGTAATAATCGCCACT +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTALSNAA*AVIIAT
Trigger: AGTGGCGATTATTACCGCCAAGGCCGCATTGCTAAG...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACTTAGCAATGCGGCCTaGGCGGTAATAATCGCCACT +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGLSNAA*AVIIAT
Trigger: AGTGGCGATTATTACCGCCAAGGCCGCATTGCTAAG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS TCA 90 bp CTCTTCATTGTTTATTTTCATCTTACAGATATACGACCCATTGTCTaGACGCTGCACACTGGTTATGCTGGGGAATGGCTACGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LFIVYFHLTDIRPIV*TLHTGYAGEWLRFL
Trigger: CAGGAAACGTAGCCATTCCCCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCACAGATATACGACCCATaGTCTGAACGCTGCACACTG +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAQIYDP*SERCTL
Trigger: CAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTG...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACAGATATACGACCCATaGTCTGAACGCTGCACACTG +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGQIYDP*SERCTL
Trigger: CAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGTCAGCCCTTTGTCATaGTGGGCCTCACAACTGAAG +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELVSPLS*WASQLK
Trigger: CTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGAC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGTCAGCCCTTTGTCATaGTGGGCCTCACAACTGAAG +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEVSPLS*WASQLK
Trigger: CTTCAGTTGTGAGGCCCACAATGACAAAGGGCTGAC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGGGGAGGGAATTGCTTaGATGTTGATCTGCACTCCC +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELGEGIA*MLICTP
Trigger: GGGAGTGCAGATCAACATCAAAGCAATTCCCTCCCC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAGGGCTTGCAGCTGCTaGATTTGGTACAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGRACSC*IWYRCG
Trigger: ACCACATCTGTACCAAATCAAGCAGCTGCAAGCCCT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGGGCTTGCAGCTGCTaGATTTGGTACAGATGTGGT +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWRACSC*IWYRCG
Trigger: ACCACATCTGTACCAAATCAAGCAGCTGCAAGCCCT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATCCCGCTGTGAAGAGTaGTCCAACTTCATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGSRCEE*SNFMVF
Trigger: GAAGACCATGAAGTTGGACAACTCTTCACAGCGGGA...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCATCCCGCTGTGAAGAGTaGTCCAACTTCATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTASRCEE*SNFMVF
Trigger: GAAGACCATGAAGTTGGACAACTCTTCACAGCGGGA...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp TTTTTCCATATCTCTATAAAGCAATGCCAAGAATGGTCAGAGCAATTGCCCCAACATTCATCTGGTGCTTaGGGGCCATGGAGTTCACTT +
Preference number: 5 (lower is better)
Translates to: FFHISIKQCQEWSEQLPQHSSGA*GPWSSL
Trigger: AAGTGAACTCCATGGCCCCAAAGCACCAGATGAATG...TTGGGGCAATTGCTCTGACCATTCTTGGCATTGCTTTATAGAGATATGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACATTCATCTGGTGCTTaGGGGCCATGGAGTTCACTT +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGHSSGA*GPWSSL
Trigger: AAGTGAACTCCATGGCCCCAAAGCACCAGATGAATG...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAATTAAGGGAATTCCTTaGCAAAGGCCACAAGGCCGC +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGIKGIP*QRPQGR
Trigger: GCGGCCTTGTGGCCTTTGCAAAGGAATTCCCTTAAT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGGAATTGCTTTGATGTaGATCTGCACTCCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGGIALM*ICTPLD
Trigger: GTCCAAGGGAGTGCAGATCAACATCAAAGCAATTCC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGGGAATTGCTTTGATGTaGATCTGCACTCCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWGIALM*ICTPLD
Trigger: GTCCAAGGGAGTGCAGATCAACATCAAAGCAATTCC...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGTAATTAGCCAGGGCTaGCAGCTGCTTGATTTGGTA +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAVISQG*QLLDLV
Trigger: TACCAAATCAAGCAGCTGCAAGCCCTGGCTAATTAC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGGGCTTTGGGATGCCTaGAGAGCTCATTTCTATACA +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAGLWDA*RAHFYT
Trigger: TGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCCC...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAATTACCATGGGCTTaGGGATGCCTTGAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWKLPWA*GCLESS
Trigger: TGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATTT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAAAATTACCATGGGCTTaGGGATGCCTTGAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAKLPWA*GCLESS
Trigger: TGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATTT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAGTAAATAACGTCTGCTaGGTTCCGAACGTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGVNNVC*VPNVRQ
Trigger: TTGCCTGACGTTCGGAACCAAGCAGACGTTATTTAC...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAACATTCATCTGGTGCTTaGGGGCCATGGAGTTCACTT +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEHSSGA*GPWSSL
Trigger: AAGTGAACTCCATGGCCCCAAAGCACCAGATGAATG...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS GCA 90 bp TGCTGTAACTTCATCATCTGGATAAAACTGTGTAATTGCATGATGTaGCCCAAGCAATTCCTTCCCATCTTTCCACCAAGAAATTGTGGT +
Preference number: 5 (lower is better)
Translates to: CCNFIIWIKLCNCMM*PKQFLPIFPPRNCG
Trigger: ACCACAATTTCTTGGTGGAAAGATGGGAAGGAATTGCTTGGGGCACATCATGCAATTACACAGTTTTATCCAGATGATGAAGTTACAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS GCA 90 bp AGCGATTATTGCTGTAACTTCATCATCTGGATAAAACTGTGTAATTaGATGATGTGCCCCAAGCAATTCCTTCCCATCTTTCCACCAAGA +
Preference number: 5 (lower is better)
Translates to: SDYCCNFIIWIKLCN*MMCPKQFLPIFPPR
Trigger: TCTTGGTGGAAAGATGGGAAGGAATTGCTTGGGGCACATCATGCAATTACACAGTTTTATCCAGATGATGAAGTTACAGCAATAATCGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAAAAGTGAGGAAGTCCTaGTACTTCGATGTAGATGGG +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGKVRKS*YFDVDG
Trigger: CCCATCTACATCGAAGTACAAGGACTTCCTCACTTT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGTAATTAGCCAGGGCTaGCAGCTGCTTGATTTGGTA +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEVISQG*QLLDLV
Trigger: TACCAAATCAAGCAGCTGCAAGCCCTGGCTAATTAC...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGGGCTTTGGGATGCCTaGAGAGCTCATTTCTATACA +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELGLWDA*RAHFYT
Trigger: TGTATAGAAATGAGCTCTCAAGGCATCCCAAAGCCC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAAAATTACCATGGGCTTaGGGATGCCTTGAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEKLPWA*GCLESS
Trigger: TGAGCTCTCAAGGCATCCCAAAGCCCATGGTAATTT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGTAAATAACGTCTGCTaGGTTCCGAACGTCAGGCAA +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELVNNVC*VPNVRQ
Trigger: TTGCCTGACGTTCGGAACCAAGCAGACGTTATTTAC...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS TCA 90 bp CTCTTCATTGTTTATTTTCATCTTACAGATATACGACCCATTGTCTaGACGCTGCACACTGGTTATGCTGAAGGAAGCGATTATTGCTGT +
Preference number: 5 (lower is better)
Translates to: LFIVYFHLTDIRPIV*TLHTGYAEGSDYCC
Trigger: ACAGCAATAATCGCTTCCTTCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAAAAGTGAGGAAGTCCTaGTACTTCGATGTAGATGGG +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAEKVRKS*YFDVDG
Trigger: CCCATCTACATCGAAGTACAAGGACTTCCTCACTTT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGATGCATTCCCAAACTTaGTCTCCTGGACTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWMHSQT*SPGLFF
Trigger: GAAAAAGAGTCCAGGAGACAAAGTTTGGGAATGCAT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAATGCATTCCCAAACTTaGTCTCCTGGACTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAMHSQT*SPGLFF
Trigger: GAAAAAGAGTCCAGGAGACAAAGTTTGGGAATGCAT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp ACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGAATGCATTCCCAAACTTaGTCTCCTGGACTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: TSGTIGFSYSRRIGLIFGMHSQT*SPGLFF
Trigger: GAAAAAGAGTCCAGGAGACAAAGTTTGGGAATGCAT...TCCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGGCTTGATTTTTGGACACATCACTTTTACTaGTGTAGACTCGGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: NIRYNWILLQQKNWLDFWTHHFY*CRLGLQ
Trigger: TTGCAGACCGAGTCTACACAAGTAAAAGTGATGTGT...CCAAAAATCAAGCCAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAACACATCACTTTTACTaGTGTAGACTCGGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTATHHFY*CRLGLQ
Trigger: TTGCAGACCGAGTCTACACAAGTAAAAGTGATGTGT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAAGCAGAAGAATTGGCTaGATTTTTGGAATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTASRRIG*IFGMSP
Trigger: GGGAGACATTCCAAAAATCAAGCCAATTCTTCTGCT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGACACATCACTTTTACTaGTGTAGACTCGGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELTHHFY*CRLGLQ
Trigger: TTGCAGACCGAGTCTACACAAGTAAAAGTGATGTGT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGAGCAGAAGAATTGGCTaGATTTTTGGAATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELSRRIG*IFGMSP
Trigger: GGGAGACATTCCAAAAATCAAGCCAATTCTTCTGCT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAAGCAGAAGAATTGGCTaGATTTTTGGAATGTCTCCC +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAESRRIG*IFGMSP
Trigger: GGGAGACATTCCAAAAATCAAGCCAATTCTTCTGCT...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp TTATCTACAGACCCTGGTGTGGTTTTTCCATATCTCTATAAAGCAATGCCAAGAAAACATCAGGTACAATaGGATTCTCCTACAGCAGAA +
Preference number: 5 (lower is better)
Translates to: LSTDPGVVFPYLYKAMPRKHQVQ*DSPTAE
Trigger: TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTT...TCTTGGCATTGCTTTATAGAGATATGGAAAAACCACACCAGGGTCTGTAGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295408.9
CDS-3UTR CAA 90 bp GGTAAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAAAACATCAGGTACAATaGGATTCTCCTACAGCAGAA +
Preference number: 5 (lower is better)
Translates to: GKEDKYQKHQVQLDSPTAKHQVQ*DSPTAE
Trigger: TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTT...TGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS-3UTR CAA 90 bp AAGGAAGACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAACTTTCCACCAAGAAATaGTGGTGTCCTGGTATATAT +
Preference number: 5 (lower is better)
Translates to: KEDKYQKHQVQLDSPTAELSTKK*WCPGIY
Trigger: ATATATACCAGGACACCACAATTTCTTGGTGGAAAG...TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTCTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295408.9
ENST00000421804.6
CDS-3UTR CAA 90 bp GACAAATACCAAAAACATCAGGTACAATTGGATTCTCCTACAGCAGAAGAATTGAAACATCAGGTACAATaGGATTCTCCTACAGCAGAA +
Preference number: 5 (lower is better)
Translates to: DKYQKHQVQLDSPTAEELKHQVQ*DSPTAE
Trigger: TTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTT...CAATTCTTCTGCTGTAGGAGAATCCAATTGTACCTGATGTTTTTGGTATTTGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000409780.5
ENST00000421804.6
ENST00000439966.5
CDS GCA 72 bp AATGGGCAATTTCATCTGCAACCTCGACCTCCCCTCTaGACATGCCCACCTGGCTTCGGGCTGCTTCAACCT +
Preference number: 6 (lower is better)
Translates to: NGQFHLQPRPPL*TCPPGFGLLQP
Trigger: AGGTTGAAGCAGCCCGAAGCCAGGTGGGCATGTGCAGAGGGGAGGTCGAGGTTGCAGATGAAATTGCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS GCA 72 bp TTGGTGGCCCTACTCCCACAAATGGGCAATTTCATCTaGAACCTCGACCTCCCCTCTGCACATGCCCACCTG +
Preference number: 6 (lower is better)
Translates to: LVALLPQMGNFI*NLDLPSAHAHL
Trigger: CAGGTGGGCATGTGCAGAGGGGAGGTCGAGGTTGCAGATGAAATTGCCCATTTGTGGGAGTAGGGCCACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS CCA 72 bp GGGTTGGTGAAAACATCAAGGCAGGCTGGTACCCACTaGCGTGAGGAAGGGATAACAGCGGTGTGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: GLVKTSRQAGTH*REEGITAVCGQ
Trigger: CTGACCACACACCGCTGTTATCCCTTCCTCACGCCAGTGGGTACCAGCCTGCCTTGATGTTTTCACCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
ENST00000616902.4
CDS CAA 90 bp CCTGGGGAATGGCTACGTTTCCTGTATGTGGTCTTCCAGGCTGGGTaGGTGAAAACATCAAGGCAGGCTGGTACCCACTGGCGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: PGEWLRFLYVVFQAG*VKTSRQAGTHWREE
Trigger: TTCCTCACGCCAGTGGGTACCAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGAAGACCACATACAGGAAACGTAGCCATTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS CAA 90 bp GCTGGGGAATGGCTACGTTTCCTGTATGTGGTCTTCCAGGCTGGGTaGGTGAAAACATCAAGGCAGGCTGGTACCCACTGGCGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: AGEWLRFLYVVFQAG*VKTSRQAGTHWREE
Trigger: TTCCTCACGCCAGTGGGTACCAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGAAGACCACATACAGGAAACGTAGCCATTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS TCA 72 bp GATGAGCACAGGATCTGCGTTGCCAGGCGCCGGAGTTaGAGAGGGGGCATAATCTACCCAACTTGTAACAGG +
Preference number: 6 (lower is better)
Translates to: DEHRICVARRRS*RGGIIYPTCNR
Trigger: CCTGTTACAAGTTGGGTAGATTATGCCCCCTCTTCAACTCCGGCGCCTGGCAACGCAGATCCTGTGCTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS CCA 72 bp GTAGGGGCTTTGATTCGACAGAGGTCACCTGGGGAATaGCTACGTTTCCTGTATGTGGTCTTCCAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: VGALIRQRSPGE*LRFLYVVFQAG
Trigger: CCCAGCCTGGAAGACCACATACAGGAAACGTAGCCATTCCCCAGGTGACCTCTGTCGAATCAAAGCCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS TCA 72 bp TACGTTTCCTGTATGTGGTCTTCCAGGCTGGGTTGGTaGAAACATCAAGGCAGGCTGGTACCCACTGGCGTG +
Preference number: 6 (lower is better)
Translates to: YVSCMWSSRLGW*KHQGRLVPTGV
Trigger: CACGCCAGTGGGTACCAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGAAGACCACATACAGGAAACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
ENST00000616902.4
CDS CCA 72 bp AGAGGCGGTAGGGGCTTTGATTCGACAGAGGTCACCTaGGGAATGGCTACGTTTCCTGTATGTGGTCTTCCA +
Preference number: 6 (lower is better)
Translates to: RGGRGFDSTEVT*GMATFPVCGLP
Trigger: TGGAAGACCACATACAGGAAACGTAGCCATTCCCCAGGTGACCTCTGTCGAATCAAAGCCCCTACCGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS CAA 72 bp TGGCTACGTTTCCTGTATGTGGTCTTCCAGGCTGGGTaGGTGAAAACATCAAGGCAGGCTGGTACCCACTGG +
Preference number: 6 (lower is better)
Translates to: WLRFLYVVFQAG*VKTSRQAGTHW
Trigger: CCAGTGGGTACCAGCCTGCCTTGATGTTTTCACCAACCCAGCCTGGAAGACCACATACAGGAAACGTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000439966.5
ENST00000616902.4
CDS GCA 72 bp TTCATCTTACAGATATACGACCCATTGTCTGAACGCTaGACACTGGTTATGCTCTACGCCAGAGCGCGGGGA +
Preference number: 6 (lower is better)
Translates to: FILQIYDPLSER*TLVMLYARARG
Trigger: TCCCCGCGCTCTGGCGTAGAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409780.5
CDS CCA 72 bp AGAGTTTTTCTAGCTGCAGCCTCAATACTGAAAAGGTaGGGCGGTCAGGGATCGGTTCTCCAGCAAGAGTAC +
Preference number: 6 (lower is better)
Translates to: RVFLAAASILKR*GGQGSVLQQEY
Trigger: GTACTCTTGCTGGAGAACCGATCCCTGACCGCCCCACCTTTTCAGTATTGAGGCTGCAGCTAGAAAAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS GCA 72 bp AGTCCGCAACACAGACAGTCATGTCATCTCGCAACCTaGAGTAAGAGCAAGATGCTGGGCTTCTTGCTAAGA +
Preference number: 6 (lower is better)
Translates to: SPQHRQSCHLAT*SKSKMLGFLLR
Trigger: TCTTAGCAAGAAGCCCAGCATCTTGCTCTTACTGCAGGTTGCGAGATGACATGACTGTCTGTGTTGCGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449344.2
CDS GCA 72 bp ATGTGGGTTTGTCCTGGAGCCCTGCAAGGTAAGGACTaGAAGTTCTGTCTGCCAAGGCTTGAATGGGTAAAA +
Preference number: 6 (lower is better)
Translates to: MWVCPGALQGKD*KFCLPRLEWVK
Trigger: TTTTACCCATTCAAGCCTTGGCAGACAGAACTTGCAGTCCTTACCTTGCAGGGCTCCAGGACAAACCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS TCA 72 bp AAGATGCTGGGCTTCTTGCTAAGATGGCCAGGTGGGTaGTGCAGTTTCGAGCAGCTAAATCTCGATGAAGAA +
Preference number: 6 (lower is better)
Translates to: KMLGFLLRWPGG*CSFEQLNLDEE
Trigger: TTCTTCATCGAGATTTAGCTGCTCGAAACTGCATCACCCACCTGGCCATCTTAGCAAGAAGCCCAGCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449344.2
CDS GCA 72 bp TTTTGTAAAATGTCATGTGGGTTTGTCCTGGAGCCCTaGAAGGTAAGGACTGCAAGTTCTGTCTGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: FCKMSCGFVLEP*KVRTASSVCQG
Trigger: GCCTTGGCAGACAGAACTTGCAGTCCTTACCTTGCAGGGCTCCAGGACAAACCCACATGACATTTTACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS GCA 72 bp TTCATCTTACAGATATACGACCCATTGTCTGAACGCTaGACACTGGTTATGCTGGGGAATGGCTACGTTTCC +
Preference number: 6 (lower is better)
Translates to: FILQIYDPLSER*TLVMLGNGYVS
Trigger: GGAAACGTAGCCATTCCCCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS CCA 72 bp AAGTTCTGTCTGCCAAGGCTTGAATGGGTAAAAACATaGCAAAGCAGTATGCAATCTCTGCCTCCGTGTGCA +
Preference number: 6 (lower is better)
Translates to: KFCLPRLEWVKT*QSSMQSLPPCA
Trigger: TGCACACGGAGGCAGAGATTGCATACTGCTTTGCCATGTTTTTACCCATTCAAGCCTTGGCAGACAGAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS CCA 72 bp ATCATGCATAACCCTAGAAGTCGAATGACATTTGGGTaGCTGAAGTCTTTCATGCACGCTGCCTCACTGAGA +
Preference number: 6 (lower is better)
Translates to: IMHNPRSRMTFG*LKSFMHAASLR
Trigger: TCTCAGTGAGGCAGCGTGCATGAAAGACTTCAGCCACCCAAATGTCATTCGACTTCTAGGGTTATGCATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS CAA 90 bp TTGACACCTTTATGTTCAGAAAGTATTATGTGTCCAACTGTGTGTTaGAAGGCAAGAGGCGGTAGGGGCTTTGATTCGACAGAGGTCACC +
Preference number: 6 (lower is better)
Translates to: LTPLCSESIMCPTVC*KARGGRGFDSTEVT
Trigger: GGTGACCTCTGTCGAATCAAAGCCCCTACCGCCTCTTGCCTTCAAACACACAGTTGGACACATAATACTTTCTGAACATAAAGGTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS CAA 90 bp ACGATCTCTTCATTGTTTATTTTCATCTTACAGATATACGACCCATaGTCTGAACGCTGCACACTGGTTATGCTCTACGCCAGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: TISSLFIFILQIYDP*SERCTLVMLYARAR
Trigger: CCGCGCTCTGGCGTAGAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGAAGAGATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409780.5
CDS TCA 72 bp AGGTGGGTGATGCAGTTTCGAGCAGCTAAATCTCGATaGAGAAAATTCCTGTTGCTCAGATACTCCATTCCC +
Preference number: 6 (lower is better)
Translates to: RWVMQFRAAKSR*RKFLLLRYSIP
Trigger: GGGAATGGAGTATCTGAGCAACAGGAATTTTCTTCATCGAGATTTAGCTGCTCGAAACTGCATCACCCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449344.2
CDS CCA 72 bp GGTAAGGACTGCAAGTTCTGTCTGCCAAGGCTTGAATaGGTAAAAACATGGCAAAGCAGTATGCAATCTCTG +
Preference number: 6 (lower is better)
Translates to: GKDCKFCLPRLE*VKTWQSSMQSL
Trigger: CAGAGATTGCATACTGCTTTGCCATGTTTTTACCCATTCAAGCCTTGGCAGACAGAACTTGCAGTCCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616902.4
CDS TCA 72 bp TATGTTCAGAAAGTATTATGTGTCCAACTGTGTGTTTaGAGGCAAGAGGCGGTAGGGGCTTTGATTCGACAG +
Preference number: 6 (lower is better)
Translates to: YVQKVLCVQLCV*RQEAVGALIRQ
Trigger: CTGTCGAATCAAAGCCCCTACCGCCTCTTGCCTTCAAACACACAGTTGGACACATAATACTTTCTGAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS TCA 72 bp GTTTATTTTCATCTTACAGATATACGACCCATTGTCTaGACGCTGCACACTGGTTATGCTCTACGCCAGAGC +
Preference number: 6 (lower is better)
Translates to: VYFHLTDIRPIV*TLHTGYALRQS
Trigger: GCTCTGGCGTAGAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409780.5
CDS TCA 72 bp GTTTATTTTCATCTTACAGATATACGACCCATTGTCTaGACGCTGCACACTGGTTATGCTGGGGAATGGCTA +
Preference number: 6 (lower is better)
Translates to: VYFHLTDIRPIV*TLHTGYAGEWL
Trigger: TAGCCATTCCCCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS GCA 72 bp TTCATCTTACAGATATACGACCCATTGTCTGAACGCTaGACACTGGTTATGCTGAAGGAAGCGATTATTGCT +
Preference number: 6 (lower is better)
Translates to: FILQIYDPLSER*TLVMLKEAIIA
Trigger: AGCAATAATCGCTTCCTTCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS CAA 90 bp ACGATCTCTTCATTGTTTATTTTCATCTTACAGATATACGACCCATaGTCTGAACGCTGCACACTGGTTATGCTGGGGAATGGCTACGTT +
Preference number: 6 (lower is better)
Translates to: TISSLFIFILQIYDP*SERCTLVMLGNGYV
Trigger: AACGTAGCCATTCCCCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGAAGAGATCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS TCA 72 bp GTTTATTTTCATCTTACAGATATACGACCCATTGTCTaGACGCTGCACACTGGTTATGCTGAAGGAAGCGAT +
Preference number: 6 (lower is better)
Translates to: VYFHLTDIRPIV*TLHTGYAEGSD
Trigger: ATCGCTTCCTTCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS CAA 72 bp TCATTGTTTATTTTCATCTTACAGATATACGACCCATaGTCTGAACGCTGCACACTGGTTATGCTCTACGCC +
Preference number: 6 (lower is better)
Translates to: SLFIFILQIYDP*SERCTLVMLYA
Trigger: GGCGTAGAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409780.5
CDS GCA 72 bp TGCTGTAACTTCATCATCTGGATAAAACTGTGTAATTaGATGATGTGCCCCAAGCAATTCCTTCCCATCTTT +
Preference number: 6 (lower is better)
Translates to: CCNFIIWIKLCN*MMCPKQFLPIF
Trigger: AAAGATGGGAAGGAATTGCTTGGGGCACATCATGCAATTACACAGTTTTATCCAGATGATGAAGTTACAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS GCA 72 bp ACGCTGCACACTGGTTATGCTGAAGGAAGCGATTATTaGTGTAACTTCATCATCTGGATAAAACTGTGTAAT +
Preference number: 6 (lower is better)
Translates to: TLHTGYAEGSDY*CNFIIWIKLCN
Trigger: ATTACACAGTTTTATCCAGATGATGAAGTTACAGCAATAATCGCTTCCTTCAGCATAACCAGTGTGCAGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS CAA 72 bp TCATTGTTTATTTTCATCTTACAGATATACGACCCATaGTCTGAACGCTGCACACTGGTTATGCTGGGGAAT +
Preference number: 6 (lower is better)
Translates to: SLFIFILQIYDP*SERCTLVMLGN
Trigger: ATTCCCCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439966.5
CDS CAA 90 bp ACGATCTCTTCATTGTTTATTTTCATCTTACAGATATACGACCCATaGTCTGAACGCTGCACACTGGTTATGCTGAAGGAAGCGATTATT +
Preference number: 6 (lower is better)
Translates to: TISSLFIFILQIYDP*SERCTLVMLKEAII
Trigger: AATAATCGCTTCCTTCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGAAGAGATCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4
CDS CAA 72 bp TCATTGTTTATTTTCATCTTACAGATATACGACCCATaGTCTGAACGCTGCACACTGGTTATGCTGAAGGAA +
Preference number: 6 (lower is better)
Translates to: SLFIFILQIYDP*SERCTLVMLKE
Trigger: TTCCTTCAGCATAACCAGTGTGCAGCGTTCAGACAATGGGTCGTATATCTGTAAGATGAAAATAAACAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295408.9
ENST00000421804.6
ENST00000616902.4