RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEPCE (Homo sapiens)

Ensembl gene IDs: ENSG00000146834

Ensembl transcript IDs: ENST00000310512.4, ENST00000414441.5, ENST00000479201.1, ENST00000497759.1

Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATaGTCCACTGAAATGCAGCTAGGGACAAGAGCTAGGTACAATGGC +
Preference number: 1 (lower is better)
Translates to: PPCQSSPSNPQSLYP*STEMQLGTRARYNG
Trigger: GCCATTGTACCTAGCTCTTGTCCCTAGCTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR-3UTR GCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAGCCTTGCTGCGCAGGTaGCAGAGGCATAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: KGRIFTVPACLPASLPRLALLRR*QRHREE
Trigger: CTCCTCCCTATGCCTCTGGCACCTGCGCAGCAAGGC...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR-3UTR TCA 90 bp CAATGGCCGAGGAGAAATGGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGTCCCCCAGGTCCTTATaGGCAGCGAGGGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: QWPRRNGNLSPWENRRKGSPRSL*AARAAS
Trigger: AGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGA...CCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR-3UTR GCA 90 bp CAATGGCCGAGGAGAAATGGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGGCCTTGCTGCGCAGGTaGCAGAGGCATAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: QWPRRNGNLSPWENRRKGALLRR*QRHREE
Trigger: CTCCTCCCTATGCCTCTGGCACCTGCGCAGCAAGGC...CCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR-3UTR GCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGACAGCACAGCCAGCCTTaGTGCGCAGGTGCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: RRKGLENLISSHLPCPKRQHSQP*CAGARG
Trigger: GCCTCTGGCACCTGCGCAGCAAGGCTGGCTGTGCTG...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR-3UTR GCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTATCAGCAAACAGTCCATaGCATCCAGCCTGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: KGRIFTVPACLPASLPRLSANSP*HPAWEA
Trigger: AGCCTCCCAGGCTGGATGGCATGGACTGTTTGCTGA...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR-3UTR GCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGACACAGCCAGCCTTGCTaGGCAGGTGCCAGAGGCATA +
Preference number: 2 (lower is better)
Translates to: RRKGLENLISSHLPCPKRHSQPC*AGARGI
Trigger: TATGCCTCTGGCACCTGCGCAGCAAGGCTGGCTGTG...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR-3UTR GCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGTCCTCCCACCTCCCATaGCCTAAGAGAACAGAGGTC +
Preference number: 2 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQSSHLP*PKRTEV
Trigger: GACCTCTGTTCTCTTAGGGCATGGGAGGTGGGAGGA...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR-3UTR GCA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGCACAGCCAGCCTTGCTaGGCAGGTGCCAGAGGCATA +
Preference number: 2 (lower is better)
Translates to: NRRKGLENLISSHLPCPKHSQPC*AGARGI
Trigger: TATGCCTCTGGCACCTGCGCAGCAAGGCTGGCTGTG...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR CAA 90 bp GGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTaGATATCCTCCCACCTCCCATGCCCTAAGAGAACAGAGGTCAGC +
Preference number: 2 (lower is better)
Translates to: GNLSPWENRRKGLEN*ISSHLPCPKRTEVS
Trigger: GCTGACCTCTGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACTGGGGACCCCGCAGATaGCGCGCAACGACCCGGACC +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHWGPRR*RATTRT
Trigger: GGTCCGGGTCGTTGCGCGCCATCTGCGGGGTCCCCA...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR GCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGAGGCGGCCTCTTGGTaGGGTGGCACCGTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSEAASW*GGTVGP
Trigger: CGGCCCCACGGTGCCACCGCACCAAGAGGCCGCCTC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTACCGACCGCAGCGGCTaGGGACCCCGCAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSTDRSG*GPRRWR
Trigger: GCGCCATCTGCGGGGTCCCCAGCCGCTGCGGTCGGT...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACAGACCACTGGAGGAGGTaGCCGCGGCCCCGGGGCTTT +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTDHWRR*PRPRGF
Trigger: AAAGCCCCGGGGCCGCGGCCACCTCCTCCAGTGGTC...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACGGGTGGTGGTGGTGGTaGCGGCCTCCCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHGWWWW*RPPQLP
Trigger: AGGGAGTTGGGGAGGCCGCCACCACCACCACCACCC...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACGGCAGTGGGTGGTGGTaGTGGTGGCGGCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHGSGWW*WWRPPQ
Trigger: TTGGGGAGGCCGCCACCACCACCACCACCCACTGCC...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAGTGGGCGGCACGGGGTaGCTCTCACTCCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLVGGTG*LSLPPA
Trigger: AGCCGGAGGGAGTGAGAGTCACCCCGTGCCGCCCAC...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTCGCCTCCCCGCCAAGTaGGCCCTACTAGCCCGCGAG +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSRLPAK*ALLARE
Trigger: CTCGCGGGCTAGTAGGGCGCACTTGGCGGGGAGGCG...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACGGTGCTGCTGCGCCTaGGGACCACTGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTRCCCA*GPLEEV
Trigger: CACCTCCTCCAGTGGTCCCCAGGCGCAGCAGCACCG...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR GCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACGGGACGGGCCCCACTTaGAGGCAATGCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHGTGPT*RQCSGS
Trigger: TGACCCTGAGCATTGCCTGCAAGTGGGGCCCGTCCC...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACATATCCAGGCCCACCATaGGGGACGGGCCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTYPGPP*GTGPTC
Trigger: GCAAGTGGGGCCCGTCCCGCATGGTGGGCCTGGATA...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACAGCACAGCCAGCCTTaGTGCGCAGGTGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTQHSQP*CAGARG
Trigger: GCCTCTGGCACCTGCGCAGCAAGGCTGGCTGTGCTG...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTGCTGCAGGCAGTGGGTaGTGGTGGTGGTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSAAGSG*WWWWRP
Trigger: AGGCCGCCACCACCACCACCACCCACTGCCTGCAGC...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTCGATGGGACCCCGGCTaGCAGTCAGCGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSRWDPG*QSARLG
Trigger: TCCCAGCCTCGCTGACTGCCAGCCGGGGTCCCATCG...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACCGCCCGACTCATCTTTaGGCGGCGGCGGCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNRPTHL*AAAAGP
Trigger: CGGCCCCGCCGCCGCCGCTCAAAGATGAGTCGGGCG...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR GCA 90 bp CAATGGCCGAGGAGAAATGGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGCCCCCTCGGTGCTGCTaGGCCTGGGGACCACTGGAG +
Preference number: 4 (lower is better)
Translates to: QWPRRNGNLSPWENRRKGPPRCC*AWGPLE
Trigger: CTCCAGTGGTCCCCAGGCGCAGCAGCACCGAGGGGG...CCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR GCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGCCTCCGGCTGCCTGCTaGTGCTGGTGGTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQPPAAC*CWWCCP
Trigger: GGGACAGCACCACCAGCAGCAGCAGGCAGCCGGAGG...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACCCCCTGCCTCCGACTTaGTGGAAGTCCTGCGACGTT +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHPLPPT*WKSCDV
Trigger: AACGTCGCAGGACTTCCAGCAAGTCGGAGGCAGGGG...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTCCCTTCCTCACCCTCTaGCCCCGGGTCCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSPFLTL*PRVPFQ
Trigger: TTGGAAGGGGACCCGGGGGCAGAGGGTGAGGAAGGG...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTAGTGGGTGGTGGTGGTaGTGGCGGCCTCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSSGWWW*WRPPQL
Trigger: GAGTTGGGGAGGCCGCCACCACCACCACCACCCACT...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGGCTGCAGGCAGTGGGTaGTGGTGGTGGTGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQAAGSG*WWWWRP
Trigger: AGGCCGCCACCACCACCACCACCCACTGCCTGCAGC...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGGCCTGCTGCAGGCAGTaGGTGGTGGTGGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQACCRQ*VVVVVA
Trigger: CGCCACCACCACCACCACCCACTGCCTGCAGCAGGC...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTACCATCCAAGGGCACTTaGGGGGCAGCGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLPSKGT*GAAMGP
Trigger: GGGTCCCATCGCTGCCCCCCAAGTGCCCTTGGATGG...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTTCCCCCAGGTCCTTATaGGCAGCGAGGGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSSPRSL*AARAAS
Trigger: AGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGA...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAGGGGCTGATAGCCATTaGGGGGTCGAGGAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLGADSH*GVEEEQ
Trigger: CTGCTCCTCCTCGACCCCGCAATGGCTATCAGCCCC...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR GCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACTGTCCCCGGTGTCTATaGCGCTTCCGACCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHCPRCL*RFRPVL
Trigger: CAAGACTGGTCGGAAGCGGCATAGACACCGGGGACA...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACATGCTGCTGCTGGTGGTaGTGTCCCCGGTGTCTATGC +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTCCCWW*CPRCLC
Trigger: GCATAGACACCGGGGACAGCACCACCAGCAGCAGCA...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACATCCACCCCTAGCCCCTaGCTCCGACTTGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTSTPSP*LRLAGS
Trigger: ACTTCCAGCAAGTCGGAGGCAGGGGCTAGGGGTGGA...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGCCTTGCTGCGCAGGTaGCAGAGGCATAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSALLRR*QRHREE
Trigger: CTCCTCCCTATGCCTCTGGCACCTGCGCAGCAAGGC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGCCTGCTGCTGCTGGTaGTGCTGTCCCCGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSACCCW*CCPRCL
Trigger: TAGACACCGGGGACAGCACCACCAGCAGCAGCAGGC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAGCCTGCTGCTGCTGGTaGTGCTGTCCCCGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLACCCW*CCPRCL
Trigger: TAGACACCGGGGACAGCACCACCAGCAGCAGCAGGC...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCGGGGCATCCCGGTTCTaGCCCCTGTGCCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLENLISSHLGASRF*PLCRGC
Trigger: GCAGCCGCGGCACAGGGGCCAGAACCGGGATGCCCC...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACCTGCCTCCGACTTGCTaGAAGTCCTGCGACGTTTGC +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHLPPTC*KSCDVC
Trigger: GCAAACGTCGCAGGACTTCCAGCAAGTCGGAGGCAG...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACCCACAAGCTCATAGCTaGAGAAGCCCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHPQAHS*RSPRLG
Trigger: CCCCAGACGTGGGCTTCTCCAGCTATGAGCTTGTGG...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGGGCCACTTAGTGGCTaGGGGATCGGGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSGPLSG*GIGPCG
Trigger: TCCACAAGGCCCGATCCCCCAGCCACTAAGTGGCCC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAAACCCCCTCTCCCACTaGGGGAGGGCAAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLNPLSH*GRAKGR
Trigger: CCTTCCCTTTGCCCTCCCCCAGTGGGAGAGGGGGTT...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTAACCCCCTCTCCCACTaGGGGAGGGCAAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSNPLSH*GRAKGR
Trigger: CCTTCCCTTTGCCCTCCCCCAGTGGGAGAGGGGGTT...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACGTGGGCGGCACGGGGTaGCTCTCACTCCCTCCGGCT +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNVGGTG*LSLPPA
Trigger: AGCCGGAGGGAGTGAGAGTCACCCCGTGCCGCCCAC...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTTTCCCCCGAAACGGCTaGGTCGTTCTCTGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSFPRNG*VVLWLL
Trigger: GAGGAGCCAGAGAACGACTCAGCCGTTTCGGGGGAA...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414441.5
CDS-3UTR GCA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGCCGGCTGCCTGCTGCTaGTGGTGGTGCTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: NRRKGLENLISSHLPCPKPAACC*WWCCPR
Trigger: CCGGGGACAGCACCACCAGCAGCAGCAGGCAGCCGG...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACACGGTTCTGGCCCCTGTaGCGCGGCTGCTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: RKGLENLISSHLPCPKRTRFWPL*RGCCEA
Trigger: CGCCTCACAGCAGCCGCGGCACAGGGGCCAGAACCG...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTTCCACCCCTAGCCCCTaGCTCCGACTTGCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSSTPSP*LRLAGS
Trigger: ACTTCCAGCAAGTCGGAGGCAGGGGCTAGGGGTGGA...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACTCTCCCCAGTTCAGATaGACCCACTTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHSPQFR*THLVRL
Trigger: CAGCCTCACCAAGTGGGTGCATCTGAACTGGGGAGA...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACTCCTCCCACCTCCCATaGCCTAAGAGAACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHSSHLP*PKRTEV
Trigger: GACCTCTGTTCTCTTAGGGCATGGGAGGTGGGAGGA...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACCCAGAGGCGGCCTCTTaGTGCGGTGGCACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNPEAAS*CGGTVG
Trigger: CCCCACGGTGCCACCGCACCAAGAGGCCGCCTCTGG...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CCA 90 bp CAATGGCCGAGGAGAAATGGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGGCTGCCTGCTGCTGCTaGTGGTGCTGTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: QWPRRNGNLSPWENRRKGAACCC*WCCPRC
Trigger: ACACCGGGGACAGCACCACCAGCAGCAGCAGGCAGC...CCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACACCTCCGGCTGCCTGCTaGTGCTGGTGGTGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: RKGLENLISSHLPCPKRTPPAAC*CWWCCP
Trigger: GGGACAGCACCACCAGCAGCAGCAGGCAGCCGGAGG...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGACTCACTCCCTCCGGCTaGCTGCTGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRLTPSG*LLLLVV
Trigger: CACCACCAGCAGCAGCAGGCAGCCGGAGGGAGTGAG...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAAGATCCGGCGAAACATaGGCTTCAGGCCCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLRSGET*ASGPRL
Trigger: GAGACGAGGGCCTGAAGCGCATGTTTCGCCGGATCT...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAGCTGCCTGCTGCTGCTaGTGGTGCTGTCCCCGGTGT +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRAACCC*WCCPRC
Trigger: ACACCGGGGACAGCACCACCAGCAGCAGCAGGCAGC...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACGAGGCGCCCTCCCCGTaGAGTAAGGGGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNEAPSP*SKGVRG
Trigger: CCCTCTCACCCCCTTACTCCACGGGGAGGGCGCCTC...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGGAGGCGCCCTCCCCGTaGAGTAAGGGGGTGAGAGGG +
Preference number: 4 (lower is better)
Translates to: NRRKGLENLISSHLPCPKEAPSP*SKGVRG
Trigger: CCCTCTCACCCCCTTACTCCACGGGGAGGGCGCCTC...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAAGGGTGGTGGTGGTGGTaGCGGCCTCCCCAACTCCCT +
Preference number: 4 (lower is better)
Translates to: EAEAATEEKLSLQIQERKGWWWW*RPPQLP
Trigger: AGGGAGTTGGGGAGGCCGCCACCACCACCACCACCC...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGGGCAGTGGGTGGTGGTaGTGGTGGCGGCCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: NRRKGLENLISSHLPCPKGSGWW*WWRPPQ
Trigger: TTGGGGAGGCCGCCACCACCACCACCACCCACTGCC...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACAATGCTCAGGGTCAGATaGCCCACATTGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTMLRVR*PTLQPR
Trigger: TCTGGGCTGCAATGTGGGCCATCTGACCCTGAGCAT...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTTACGACGACCAGGGTTaGGGCTCTAGGACCAGGATG +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSYDDQG*GSRTRM
Trigger: CATCCTGGTCCTAGAGCCCCAACCCTGGTCGTCGTA...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACAGGAGAAGCCCACGTCTaGGGATGTCAGGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTGEAHV*GCQVGT
Trigger: AGTTCCTACCTGACATCCCCAGACGTGGGCTTCTCC...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGTGTCCCCGGTGTCTATaGCGCTTCCGACCAGTCTTG +
Preference number: 4 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQCPRCL*RFRPVL
Trigger: CAAGACTGGTCGGAAGCGGCATAGACACCGGGGACA...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATCCGGCTGCCTGCTGCTaGTGGTGGTGCTGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYPAACC*WWCCPR
Trigger: CCGGGGACAGCACCACCAGCAGCAGCAGGCAGCCGG...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGCTCACTCCCTCCGGCTaGCTGCTGCTGCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NRRKGLENLISSHLPCPKLTPSG*LLLLVV
Trigger: CACCACCAGCAGCAGCAGGCAGCCGGAGGGAGTGAG...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATCGGTTCTGGCCCCTGTaGCGCGGCTGCTGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYRFWPL*RGCCEA
Trigger: CGCCTCACAGCAGCCGCGGCACAGGGGCCAGAACCG...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp CAATGGCCGAGGAGAAATGGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGCCCCTGCCTCCGACTTaGTGGAAGTCCTGCGACGTT +
Preference number: 4 (lower is better)
Translates to: QWPRRNGNLSPWENRRKGPLPPT*WKSCDV
Trigger: AACGTCGCAGGACTTCCAGCAAGTCGGAGGCAGGGG...CCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTTCTCCCCAGTTCAGATaGACCCACTTGGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSSPQFR*THLVRL
Trigger: CAGCCTCACCAAGTGGGTGCATCTGAACTGGGGAGA...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACAGCTCTAGGACCAGGATaGCCCCAGGGCGTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RKGLENLISSHLPCPKRTALGPG*PQGVGA
Trigger: GGCACCTACGCCCTGGGGGCATCCTGGTCCTAGAGC...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTTCAGCAAACAGTCCATaGCATCCAGCCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSSANSP*HPAWEA
Trigger: AGCCTCCCAGGCTGGATGGCATGGACTGTTTGCTGA...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGACTCGGCCCTTTTCCTTaGAACCCTGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRLGPFP*NPGLHP
Trigger: GGGGTGGAGGCCAGGGTTCCAAGGAAAAGGGCCGAG...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCAGTGGGTGGTGGTGGTaGTGGCGGCCTCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLENLISSHLSGWWW*WRPPQL
Trigger: GAGTTGGGGAGGCCGCCACCACCACCACCACCCACT...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTTCTTTCGAACGGTGGTaGTCCCTTCCTCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSSFERW*SLPHPL
Trigger: CAGAGGGTGAGGAAGGGACCACCACCGTTCGAAAGA...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTTCCTCTTTCGAACGGTaGTGGTCCCTTCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSSSFER*WSLPHP
Trigger: AGGGTGAGGAAGGGACCACCACCGTTCGAAAGAGGA...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATCCAAGGGCACTTaGGGGGCAGCGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLENLISSHLPSKGT*GAAMGP
Trigger: GGGTCCCATCGCTGCCCCCCAAGTGCCCTTGGATGG...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACAGGTACACAGGACGCTaGAAGCCTTTAGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHRYTGR*KPLEVL
Trigger: CAACACCTCTAAAGGCTTCCAGCGTCCTGTGTACCT...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGCTTCCGACCAGTCTTaGGTGGCGAAGCAAGAACTA +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSASDQS*VAKQEL
Trigger: TAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTCCCCCAGGTCCTTATaGGCAGCGAGGGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNSPRSL*AARAAS
Trigger: AGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGA...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTATCCATGGTCCACTaGAATGCAGCTAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTLSMVH*NAARDK
Trigger: CTTGTCCCTAGCTGCATTTCAGTGGACCATGGATAG...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAGTGCTGTTCTCACATTaGAAACCCAACCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLVLFSH*KPNPLS
Trigger: GGAGAGGGGGTTGGGTTTTCAATGTGAGAACAGCAC...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACGTGCGCGCGCAGCTCTaGTCTTCACGCCTAGTCTCG +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNVRAQL*SSRLVS
Trigger: CGAGACTAGGCGTGAAGAGCAGAGCTGCGCGCGCAC...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR GCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGACTTGCTGGAAGTCCTaGGACGTTTGCGATGTCGGG +
Preference number: 4 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQTCWKS*DVCDVG
Trigger: CCCGACATCGCAAACGTCGCAGGACTTCCAGCAAGT...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACCCTCACAGGAAGGATTaGGGTACCCATAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHPHRKD*GTHSIC
Trigger: GCAAATACTATGGGTACCGCAATCCTTCCTGTGAGG...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTATCAGATGGCCCACATTaGAGCCCAGATCTAGGACGT +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLSDGPH*SPDLGR
Trigger: ACGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGA...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTTCAGATGGCCCACATTaGAGCCCAGATCTAGGACGT +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSSDGPH*SPDLGR
Trigger: ACGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGA...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAGATTTTCACAGTACCTaGGTGCCTCCCTGCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KGRIFTVPACLPASLPRLDFHST*VPPCQS
Trigger: AGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATC...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACCGACCAGTCTTGAGTaGCGAAGCAAGAACTACATG +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTPTSLE*RSKNYM
Trigger: CATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGG...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTCGGCCCTTTTCCTTaGAACCCTGGCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: EAEAATEEKLSLQIQERKLGPFP*NPGLHP
Trigger: GGGGTGGAGGCCAGGGTTCCAAGGAAAAGGGCCGAG...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATGCCTGCTGCAGGCAGTaGGTGGTGGTGGTGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYACCRQ*VVVVVA
Trigger: CGCCACCACCACCACCACCCACTGCCTGCAGCAGGC...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGATCCCCTTCCAAAGTCTaGGGTGGGAGACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRSPSKV*GGRRSS
Trigger: GGAGCTGCGTCTCCCACCCCAGACTTTGGAAGGGGA...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATCGATGGGACCCCGGCTaGCAGTCAGCGAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYRWDPG*QSARLG
Trigger: TCCCAGCCTCGCTGACTGCCAGCCGGGGTCCCATCG...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CAATGGCCGAGGAGAAATGGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGTACGACGACCAGGGTTaGGGCTCTAGGACCAGGATG +
Preference number: 4 (lower is better)
Translates to: QWPRRNGNLSPWENRRKGYDDQG*GSRTRM
Trigger: CATCCTGGTCCTAGAGCCCCAACCCTGGTCGTCGTA...CCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CAATGGCCGAGGAGAAATGGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGCCACAAGCTCATAGCTaGAGAAGCCCACGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QWPRRNGNLSPWENRRKGPQAHS*RSPRLG
Trigger: CCCCAGACGTGGGCTTCTCCAGCTATGAGCTTGTGG...CCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGGCTTCCGACCAGTCTTaGGTGGCGAAGCAAGAACTA +
Preference number: 4 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQASDQS*VAKQEL
Trigger: TAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGC...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTATTGTTGGGGAAGACTaGTGTGTCCGCTCCATCCAA +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSIVGED*CVRSIQ
Trigger: TTGGATGGAGCGGACACATCAGTCTTCCCCAACAAT...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACATGCTGCTGCTGGTGGTaGTGTCCCCGGTGTCTATGC +
Preference number: 4 (lower is better)
Translates to: RKGLENLISSHLPCPKRTCCCWW*CPRCLC
Trigger: GCATAGACACCGGGGACAGCACCACCAGCAGCAGCA...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTATCCAGGCCCACCATaGGGGACGGGCCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYYPGPP*GTGPTC
Trigger: GCAAGTGGGGCCCGTCCCGCATGGTGGGCCTGGATA...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTCCGACCAGTCTTGAGTaGCGAAGCAAGAACTACATG +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSPTSLE*RSKNYM
Trigger: CATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGG...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAATCCCCTTCCAAAGTCTaGGGTGGGAGACGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: EAEAATEEKLSLQIQERKSPSKV*GGRRSS
Trigger: GGAGCTGCGTCTCCCACCCCAGACTTTGGAAGGGGA...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGACCAATCGCAATCACCTaGAGACGCCACACCACGCCT +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRPIAIT*RRHTTP
Trigger: AGGCGTGGTGTGGCGTCTCCAGGTGATTGCGATTGG...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414441.5
CDS-3UTR TCA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCGGCGGGCAGAATGGATaGGCCGGGAATCGATATCCA +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLENLISSHLGGQNG*AGNRYP
Trigger: TGGATATCGATTCCCGGCTCATCCATTCTGCCCGCC...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCACCGCCCCCTCGGTGCTaGTGCGCCTGGGGACCACTG +
Preference number: 4 (lower is better)
Translates to: TEEKLSLQIQERKLFLESPPPRC*CAWGPL
Trigger: CAGTGGTCCCCAGGCGCAGCAGCACCGAGGGGGCGG...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR GCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAAAGTCCTGCGACGTTTaGGATGTCGGGAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRKSCDV*DVGRRK
Trigger: CTTCCTCCTCCCGACATCGCAAACGTCGCAGGACTT...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATGGGACGGGCCCCACTTaGAGGCAATGCTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYGTGPT*RQCSGS
Trigger: TGACCCTGAGCATTGCCTGCAAGTGGGGCCCGTCCC...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACAGAAGCAAGAACTACATaGCCCTCATCAGTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTEARTT*PSSVQV
Trigger: TACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTC...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCAGGGGCATCCCGGTTCTaGCCCCTGTGCCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: TEEKLSLQIQERKLFLESGASRF*PLCRGC
Trigger: GCAGCCGCGGCACAGGGGCCAGAACCGGGATGCCCC...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAATGCTCAGGGTCAGATaGCCCACATTGCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRMLRVR*PTLQPR
Trigger: TCTGGGCTGCAATGTGGGCCATCTGACCCTGAGCAT...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGTTTTGGCGGGCAGAATaGATGAGCCGGGAATCGATA +
Preference number: 4 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQFWRAE*MSRESI
Trigger: TATCGATTCCCGGCTCATCCATTCTGCCCGCCAAAA...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAATTCCAAAGTCTGGGGTaGGAGACGCAGCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: EAEAATEEKLSLQIQERKFQSLG*ETQLLG
Trigger: TCCGAGGAGCTGCGTCTCCCACCCCAGACTTTGGAA...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGATCTTTCGAACGGTGGTaGTCCCTTCCTCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRSFERW*SLPHPL
Trigger: CAGAGGGTGAGGAAGGGACCACCACCGTTCGAAAGA...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTGCACATAATTACCCGTaGCGAAGACAACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: IFTVPACLPASLPRLTLSAHNYP*RRQHCW
Trigger: CCAACAATGTTGTCTTCGTCACGGGTAATTATGTGC...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAAAAGTCCTGCGACGTTTaGGATGTCGGGAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: EAEAATEEKLSLQIQERKKSCDV*DVGRRK
Trigger: CTTCCTCCTCCCGACATCGCAAACGTCGCAGGACTT...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCACTTGCTGGAAGTCCTaGGACGTTTGCGATGTCGGG +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLENLISSHLTCWKS*DVCDVG
Trigger: CCCGACATCGCAAACGTCGCAGGACTTCCAGCAAGT...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACCTTTTTGAAGCCTGCTaGAGGCAGTGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNLFEAC*RQWVVV
Trigger: CACCACCACCCACTGCCTGCAGCAGGCTTCAAAAAG...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTTTTTGAAGCCTGCTaGAGGCAGTGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EAEAATEEKLSLQIQERKLFEAC*RQWVVV
Trigger: CACCACCACCCACTGCCTGCAGCAGGCTTCAAAAAG...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTGCTCTAGGACCAGGATaGCCCCAGGGCGTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFALGPG*PQGVGA
Trigger: GGCACCTACGCCCTGGGGGCATCCTGGTCCTAGAGC...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTCAGCAAACAGTCCATaGCATCCAGCCTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNSANSP*HPAWEA
Trigger: AGCCTCCCAGGCTGGATGGCATGGACTGTTTGCTGA...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCTCCTCCCACCTCCCATaGCCTAAGAGAACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLENLISSHLSSHLP*PKRTEV
Trigger: GACCTCTGTTCTCTTAGGGCATGGGAGGTGGGAGGA...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTCCTCTTTCGAACGGTaGTGGTCCCTTCCTCACCCT +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNSSFER*WSLPHP
Trigger: AGGGTGAGGAAGGGACCACCACCGTTCGAAAGAGGA...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CAATGGCCGAGGAGAAATGGGAATCTCTCTCCTTGGGAGAATAGGAGGAAAGGGTCATACTCAGGTGTTTaGGCCTCCACCAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: QWPRRNGNLSPWENRRKGSYSGV*ASTRSS
Trigger: AGATGACCTGGTGGAGGCCCAAACACCTGAGTATGA...CCCTTTCCTCCTATTCTCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGGAACTGAACTGCTCTaGCTTCAATTGGATTCGGTA +
Preference number: 4 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSGTELL*LQLDSV
Trigger: TACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACAGGAGAAGCCCACGTCTaGGGATGTCAGGTAGGAACT +
Preference number: 4 (lower is better)
Translates to: RKGLENLISSHLPCPKRTGEAHV*GCQVGT
Trigger: AGTTCCTACCTGACATCCCCAGACGTGGGCTTCTCC...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATGGGGATCGGGCCTTGTaGAACAGGTACACAGGACGC +
Preference number: 4 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYGDRAL*NRYTGR
Trigger: GCGTCCTGTGTACCTGTTCCACAAGGCCCGATCCCC...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGATGTCAGGTAGGAACTaGACTGCTCTGGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQMSGRN*TALASI
Trigger: AATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACAT...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGGTGCTGTTCTCACATTaGAAACCCAACCCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NRRKGLENLISSHLPCPKVLFSH*KPNPLS
Trigger: GGAGAGGGGGTTGGGTTTTCAATGTGAGAACAGCAC...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAATTGCTTTTTGAAGCCTaGTGCAGGCAGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: EAEAATEEKLSLQIQERKLLFEA*CRQWVV
Trigger: CACCACCCACTGCCTGCAGCAGGCTTCAAAAAGCAA...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGATCATACTCAGGTGTTTaGGCCTCCACCAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRSYSGV*ASTRSS
Trigger: AGATGACCTGGTGGAGGCCCAAACACCTGAGTATGA...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAATGGCCGAGGAGAAATaGGAATCTCTCTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRMAEEK*ESLSLG
Trigger: TCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCAT...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCATTGTTGGGGAAGACTaGTGTGTCCGCTCCATCCAA +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLENLISSHLIVGED*CVRSIQ
Trigger: TTGGATGGAGCGGACACATCAGTCTTCCCCAACAAT...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACACTATCCATGGTCCACTaGAATGCAGCTAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: RKGLENLISSHLPCPKRTLSMVH*NAARDK
Trigger: CTTGTCCCTAGCTGCATTTCAGTGGACCATGGATAG...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGATGGAACTTGCGCTGTTaGTTTTTGAAGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRWNLRC*FLKPAA
Trigger: TGCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCA...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGACCTCACAGGAAGGATTaGGGTACCCATAGTATTTGC +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRPHRKD*GTHSIC
Trigger: GCAAATACTATGGGTACCGCAATCCTTCCTGTGAGG...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCACCCTTCCTCACCCTCTaGCCCCGGGTCCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TEEKLSLQIQERKLFLESPFLTL*PRVPFQ
Trigger: TTGGAAGGGGACCCGGGGGCAGAGGGTGAGGAAGGG...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTCACAGCCAGCCTTGCTaGGCAGGTGCCAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFHSQPC*AGARGI
Trigger: TATGCCTCTGGCACCTGCGCAGCAAGGCTGGCTGTG...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCACAGCACAGCCAGCCTTaGTGCGCAGGTGCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TEEKLSLQIQERKLFLESQHSQP*CAGARG
Trigger: GCCTCTGGCACCTGCGCAGCAAGGCTGGCTGTGCTG...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACATTTTGGCGGGCAGAATaGATGAGCCGGGAATCGATA +
Preference number: 4 (lower is better)
Translates to: RKGLENLISSHLPCPKRTFWRAE*MSRESI
Trigger: TATCGATTCCCGGCTCATCCATTCTGCCCGCCAAAA...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACAAGGTACACAGGACGCTaGAAGCCTTTAGAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RKGLENLISSHLPCPKRTRYTGR*KPLEVL
Trigger: CAACACCTCTAAAGGCTTCCAGCGTCCTGTGTACCT...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGACAGTCCCTCTATCCATaGTCCACTGAAATGCAGCTA +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRQSLYP*STEMQL
Trigger: TAGCTGCATTTCAGTGGACCATGGATAGAGGGACTG...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
3UTR CAA 72 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTaGATATCCTCCCACCTCCCATGCCCTAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLEN*ISSHLPCPKRT
Trigger: TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTGGCGGGCAGAATGGATaGGCCGGGAATCGATATCCA +
Preference number: 4 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFGGQNG*AGNRYP
Trigger: TGGATATCGATTCCCGGCTCATCCATTCTGCCCGCC...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTGCTTTTTGAAGCCTaGTGCAGGCAGTGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYLLFEA*CRQWVV
Trigger: CACCACCCACTGCCTGCAGCAGGCTTCAAAAAGCAA...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAATGGAACTTGCGCTGTTaGTTTTTGAAGCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: EAEAATEEKLSLQIQERKWNLRC*FLKPAA
Trigger: TGCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCA...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTAGATCCGGCGAAACATaGGCTTCAGGCCCTCGTCTC +
Preference number: 4 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFRSGET*ASGPRL
Trigger: GAGACGAGGGCCTGAAGCGCATGTTTCGCCGGATCT...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTCTGCCTCCGACTTGCTaGAAGTCCTGCGACGTTTGC +
Preference number: 4 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFLPPTC*KSCDVC
Trigger: GCAAACGTCGCAGGACTTCCAGCAAGTCGGAGGCAG...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTTCCAAAGTCTGGGGTaGGAGACGCAGCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFFQSLG*ETQLLG
Trigger: TCCGAGGAGCTGCGTCTCCCACCCCAGACTTTGGAA...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAGGAACTGAACTGCTCTaGCTTCAATTGGATTCGGTA +
Preference number: 4 (lower is better)
Translates to: RRKGLENLISSHLPCPKRGTELL*LQLDSV
Trigger: TACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCC...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGCAGTCCCTCTATCCATaGTCCACTGAAATGCAGCTA +
Preference number: 4 (lower is better)
Translates to: NRRKGLENLISSHLPCPKQSLYP*STEMQL
Trigger: TAGCTGCATTTCAGTGGACCATGGATAGAGGGACTG...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGGCACATAATTACCCGTaGCGAAGACAACATTGTTGG +
Preference number: 4 (lower is better)
Translates to: NRRKGLENLISSHLPCPKAHNYP*RRQHCW
Trigger: CCAACAATGTTGTCTTCGTCACGGGTAATTATGTGC...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACATGTCAGGTAGGAACTaGACTGCTCTGGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNMSGRN*TALASI
Trigger: AATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACAT...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR GCA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCACACAGCCAGCCTTGCTaGGCAGGTGCCAGAGGCATA +
Preference number: 4 (lower is better)
Translates to: TEEKLSLQIQERKLFLESHSQPC*AGARGI
Trigger: TATGCCTCTGGCACCTGCGCAGCAAGGCTGGCTGTG...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCGAAGCAAGAACTACATaGCCCTCATCAGTGCAAGTA +
Preference number: 4 (lower is better)
Translates to: SPWENRRKGLENLISSHLEARTT*PSSVQV
Trigger: TACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTC...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CCA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTATGGCCGAGGAGAAATaGGAATCTCTCTCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFMAEEK*ESLSLG
Trigger: TCCCAAGGAGAGAGATTCCCATTTCTCCTCGGCCAT...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR TCA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCATCCAGGAGGCCCCCTTaGAAATATTCTCTGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TEEKLSLQIQERKLFLESSRRPP*KYSLLN
Trigger: ATTCAGCAGAGAATATTTTCAAGGGGGCCTCCTGGA...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414441.5
CDS GCA 90 bp CCAGGATGCCCCCAGGGCGTAGGTGCCGGTAGATCCGGCGAAACATaGGCTTCAGGCCCTCGTCTCCCCAGTTCAGATGCACCCACTTGG +
Preference number: 5 (lower is better)
Translates to: PGCPQGVGAGRSGET*ASGPRLPSSDAPTW
Trigger: CCAAGTGGGTGCATCTGAACTGGGGAGACGAGGGCCTGAAGCGCATGTTTCGCCGGATCTACCGGCACCTACGCCCTGGGGGCATCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CCA 90 bp ACCATGCGGGACGGGCCCCACTTGCAGGCAATGCTCAGGGTCAGATaGCCCACATTGCAGCCCAGATCTAGGACGTCCCGGCCCCGAAAC +
Preference number: 5 (lower is better)
Translates to: TMRDGPHLQAMLRVR*PTLQPRSRTSRPRN
Trigger: GTTTCGGGGCCGGGACGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGACCCTGAGCATTGCCTGCAAGTGGGGCCCGTCCCGCATGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS GCA 90 bp ACGGGCCCCACTTGCAGGCAATGCTCAGGGTCAGATGGCCCACATTaGAGCCCAGATCTAGGACGTCCCGGCCCCGAAACCACTCAGGCT +
Preference number: 5 (lower is better)
Translates to: TGPTCRQCSGSDGPH*SPDLGRPGPETTQA
Trigger: AGCCTGAGTGGTTTCGGGGCCGGGACGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGACCCTGAGCATTGCCTGCAAGTGGGGCCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS GCA 90 bp GCCGGGAATCGATATCCAGGCCCACCATGCGGGACGGGCCCCACTTaGAGGCAATGCTCAGGGTCAGATGGCCCACATTGCAGCCCAGAT +
Preference number: 5 (lower is better)
Translates to: AGNRYPGPPCGTGPT*RQCSGSDGPHCSPD
Trigger: ATCTGGGCTGCAATGTGGGCCATCTGACCCTGAGCATTGCCTGCAAGTGGGGCCCGTCCCGCATGGTGGGCCTGGATATCGATTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS TCA 90 bp GCTCCTCGGAAAGGTAGTGTCGGATGTTTTGGCGGGCAGAATGGATaGGCCGGGAATCGATATCCAGGCCCACCATGCGGGACGGGCCCC +
Preference number: 5 (lower is better)
Translates to: APRKGSVGCFGGQNG*AGNRYPGPPCGTGP
Trigger: GGGGCCCGTCCCGCATGGTGGGCCTGGATATCGATTCCCGGCTCATCCATTCTGCCCGCCAAAACATCCGACACTACCTTTCCGAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000497759.1
CDS GCA 90 bp TTCTCTTGCCATACGACGACCAGGGTTGGGGCTCTAGGACCAGGATaGCCCCAGGGCGTAGGTGCCGGTAGATCCGGCGAAACATGCGCT +
Preference number: 5 (lower is better)
Translates to: FSCHTTTRVGALGPG*PQGVGAGRSGETCA
Trigger: AGCGCATGTTTCGCCGGATCTACCGGCACCTACGCCCTGGGGGCATCCTGGTCCTAGAGCCCCAACCCTGGTCGTCGTATGGCAAGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTCGGGACGGGCCCCACTaGCAGGCAATGCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: IFTVPACLPASLPRLTLSRDGPH*QAMLRV
Trigger: GACCCTGAGCATTGCCTGCAAGTGGGGCCCGTCCCG...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCGCCCGACTCATCTTaGAGCGGCGGCGGCGGGGCC +
Preference number: 5 (lower is better)
Translates to: SPWENRRKGLENLISSHLPPDSS*SGGGGA
Trigger: GGCCCCGCCGCCGCCGCTCAAAGATGAGTCGGGCGG...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CAA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGCCCCTGCCTCCGACTaGCTGGAAGTCCTGCGACGT +
Preference number: 5 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSAPASD*LEVLRR
Trigger: ACGTCGCAGGACTTCCAGCAAGTCGGAGGCAGGGGC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CCA 90 bp AGGGCAGCCTCTTCACACTTTCTGTTTAGGGGGCCACTTAGTGGCTaGGGGATCGGGCCTTGTGGAACAGGTACACAGGACGCTGGAAGC +
Preference number: 5 (lower is better)
Translates to: RAASSHFLFRGPLSG*GIGPCGTGTQDAGS
Trigger: GCTTCCAGCGTCCTGTGTACCTGTTCCACAAGGCCCGATCCCCCAGCCACTAAGTGGCCCCCTAAACAGAAAGTGTGAAGAGGCTGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCCAGAGGCGGCCTCTaGGTGCGGTGGCACCGTGGG +
Preference number: 5 (lower is better)
Translates to: SPWENRRKGLENLISSHLPRGGL*VRWHRG
Trigger: CCCACGGTGCCACCGCACCAAGAGGCCGCCTCTGGG...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CAA 90 bp CAGTCTTCCCCGTCTAACCCTCAGTCCCTCTATCCATGGTCCACTGAAATGCAGCCTCGGCCCTTTTCCTaGGAACCCTGGCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: QSSPSNPQSLYPWSTEMQPRPFS*EPWPPP
Trigger: GGGTGGAGGCCAGGGTTCCAAGGAAAAGGGCCGAGG...CTGCATTTCAGTGGACCATGGATAGAGGGACTGAGGGTTAGACGGGGAAGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS GCA 90 bp ATAATTCCCATACTGGAACTTGCGCTGTTGCTTTTTGAAGCCTGCTaGAGGCAGTGGGTGGTGGTGGTGGTGGCGGCCTCCCCAACTCCC +
Preference number: 5 (lower is better)
Translates to: IIPILELALLLFEAC*RQWVVVVVAASPTP
Trigger: GGGAGTTGGGGAGGCCGCCACCACCACCACCACCCACTGCCTGCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCAGTATGGGAATTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS GCA 90 bp ATCCGGCGAAACATGCGCTTCAGGCCCTCGTCTCCCCAGTTCAGATaGACCCACTTGGTGAGGCTGAGGCAGAGCACCACATCATACTCA +
Preference number: 5 (lower is better)
Translates to: IRRNMRFRPSSPQFR*THLVRLRQSTTSYS
Trigger: TGAGTATGATGTGGTGCTCTGCCTCAGCCTCACCAAGTGGGTGCATCTGAACTGGGGAGACGAGGGCCTGAAGCGCATGTTTCGCCGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACAGAAGTCCTGCGACGTTaGCGATGTCGGGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTEVLRR*RCREEE
Trigger: TTCCTCCTCCCGACATCGCAAACGTCGCAGGACTTC...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS TCA 90 bp GCTGGTGGTGCTGTCCCCGGTGTCTATGCCGCTTCCGACCAGTCTTaGGTGGCGAAGCAAGAACTACATGGCCCTCATCAGTGCAAGTAT +
Preference number: 5 (lower is better)
Translates to: AGGAVPGVYAASDQS*VAKQELHGPHQCKY
Trigger: ATACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCGGCATAGACACCGGGGACAGCACCACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS TCA 90 bp GGGAGCTGGTGTGAAAAGGTCTCCTTGACACCCGACCCTTGTTCCTaGGGAATGAGTCTCAGCGGTCTCCGCCCGGCTCTAAATCCAACA +
Preference number: 5 (lower is better)
Translates to: GSWCEKVSLTPDPCS*GMSLSGLRPALNPT
Trigger: TGTTGGATTTAGAGCCGGGCGGAGACCGCTGAGACTCATTCCTCAGGAACAAGGGTCGGGTGTCAAGGAGACCTTTTCACACCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479201.1
CDS GCA 90 bp GCAATAATTCCCATACTGGAACTTGCGCTGTTGCTTTTTGAAGCCTaGTGCAGGCAGTGGGTGGTGGTGGTGGTGGCGGCCTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: AIIPILELALLLFEA*CRQWVVVVVAASPT
Trigger: AGTTGGGGAGGCCGCCACCACCACCACCACCCACTGCCTGCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCAGTATGGGAATTATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS-3UTR CAA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTGTCAGATGGCCCACATaGCAGCCCAGATCTAGGACG +
Preference number: 5 (lower is better)
Translates to: IFTVPACLPASLPRLTLSVRWPT*QPRSRT
Trigger: CGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGAC...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACCGGGACGGGCCCCACTaGCAGGCAATGCTCAGGGTC +
Preference number: 5 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNRDGPH*QAMLRV
Trigger: GACCCTGAGCATTGCCTGCAAGTGGGGCCCGTCCCG...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTATTCAGATGCACCCACTaGGTGAGGCTGAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KGRIFTVPACLPASLPRLFRCTH*VRLRQS
Trigger: GCTCTGCCTCAGCCTCACCAAGTGGGTGCATCTGAA...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CCA 90 bp GTGGTGCTGTCCCCGGTGTCTATGCCGCTTCCGACCAGTCTTGAGTaGCGAAGCAAGAACTACATGGCCCTCATCAGTGCAAGTATTGAG +
Preference number: 5 (lower is better)
Translates to: VVLSPVSMPLPTSLE*RSKNYMALISASIE
Trigger: CTCAATACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCGGCATAGACACCGGGGACAGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTCGCTTCCGACCAGTCTaGAGTGGCGAAGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSRFRPV*SGEART
Trigger: AGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCG...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp ATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAACCCTCAGTCGCTTCCGACCAGTCTaGAGTGGCGAAGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: IFTVPACLPASLPRLTLSRFRPV*SGEART
Trigger: AGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCG...ACTGAGGGTTAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCGCCCCTGCCTCCGACTaGCTGGAAGTCCTGCGACGT +
Preference number: 5 (lower is better)
Translates to: SPWENRRKGLENLISSHLAPASD*LEVLRR
Trigger: ACGTCGCAGGACTTCCAGCAAGTCGGAGGCAGGGGC...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp GACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACAATCATACTCAGGTGTTaGGGCCTCCACCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: DTFLFPQVLMSSEGSLFTIILRC*GLHQVI
Trigger: GATGACCTGGTGGAGGCCCAAACACCTGAGTATGAT...TGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAAAGCCTTTAGAGGTGTaGTGGGGTGTGGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: KGRIFTVPACLPASLPRLKPLEV*WGVATS
Trigger: GCTTGTGGCCACACCCCACAACACCTCTAAAGGCTT...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACCTAAAACAGCCGATGTaGTCCAACTTCCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHLKQPM*SNFLFP
Trigger: GGGGAAGAGGAAGTTGGACAACATCGGCTGTTTTAG...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414441.5
CDS-3UTR CAA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGTAGTGTCGGATGTTTaGGCGGGCAGAATGGATGAG +
Preference number: 5 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSVVSDV*AGRMDE
Trigger: CTCATCCATTCTGCCCGCCAAAACATCCGACACTAC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AAGGGAAGGATTTTCACAGTACCTGCGTGCCTCCCTGCCAGTCTTCCCCGTCTAGTAGTGTCGGATGTTTaGGCGGGCAGAATGGATGAG +
Preference number: 5 (lower is better)
Translates to: KGRIFTVPACLPASLPRLVVSDV*AGRMDE
Trigger: CTCATCCATTCTGCCCGCCAAAACATCCGACACTAC...TAGACGGGGAAGACTGGCAGGGAGGCACGCAGGTACTGTGAAAATCCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS TCA 90 bp AGTATTTGCAATAATTCCCATACTGGAACTTGCGCTGTTGCTTTTTaGAGCCTGCTGCAGGCAGTGGGTGGTGGTGGTGGTGGCGGCCTC +
Preference number: 5 (lower is better)
Translates to: SICNNSHTGTCAVAF*SLLQAVGGGGGGGL
Trigger: GAGGCCGCCACCACCACCACCACCCACTGCCTGCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCAGTATGGGAATTATTGCAAATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS-3UTR CAA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCACCCGCCTGCGCCTCTaGAAGGCCGGATGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: SPWENRRKGLENLISSHLTRLRL*KAGCLK
Trigger: CTTCAAACATCCGGCCTTCAAGAGGCGCAGGCGGGT...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CAA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAATTAGGGGTCTCCGCGTaGAGAGTGCGGCTCACTTCC +
Preference number: 5 (lower is better)
Translates to: EAEAATEEKLSLQIQERKLGVSA*RVRLTS
Trigger: GGAAGTGAGCCGCACTCTCAACGCGGAGACCCCTAA...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp GGACACTTTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACCTGCTCTGGCTTCAATaGGATTCGGTAGTAGTTCTT +
Preference number: 5 (lower is better)
Translates to: GHFPLPPGPYEQRGQPLHLLWLQ*DSVVVL
Trigger: AAGAACTACTACCGAATCCAATTGAAGCCAGAGCAG...GTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAAAGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTGGGGGATCGGGCCTaGTGGAACAGGTACACAGGA +
Preference number: 5 (lower is better)
Translates to: EAEAATEEKLSLQIQERKLGDRA*WNRYTG
Trigger: TCCTGTGTACCTGTTCCACAAGGCCCGATCCCCCAG...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGGAAGTCCTGCGACGTTaGCGATGTCGGGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: NRRKGLENLISSHLPCPKEVLRR*RCREEE
Trigger: TTCCTCCTCCCGACATCGCAAACGTCGCAGGACTTC...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACAGTCAGATGGCCCACATaGCAGCCCAGATCTAGGACG +
Preference number: 5 (lower is better)
Translates to: RKGLENLISSHLPCPKRTVRWPT*QPRSRT
Trigger: CGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGAC...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTGTGACGAAGACAACATaGTTGGGGAAGACTGATGTG +
Preference number: 5 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSVTKTT*LGKTDV
Trigger: CACATCAGTCTTCCCCAACAATGTTGTCTTCGTCAC...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGTTCAGATGCACCCACTaGGTGAGGCTGAGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: NRRKGLENLISSHLPCPKFRCTH*VRLRQS
Trigger: GCTCTGCCTCAGCCTCACCAAGTGGGTGCATCTGAA...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAAAGCCTTTAGAGGTGTaGTGGGGTGTGGCCACAAGC +
Preference number: 5 (lower is better)
Translates to: RRKGLENLISSHLPCPKRKPLEV*WGVATS
Trigger: GCTTGTGGCCACACCCCACAACACCTCTAAAGGCTT...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CCA 90 bp CTATGCCGCTTCCGACCAGTCTTGAGTGGCGAAGCAAGAACTACATaGCCCTCATCAGTGCAAGTATTGAGACTGAGCGGGTCAGTAATA +
Preference number: 5 (lower is better)
Translates to: LCRFRPVLSGEARTT*PSSVQVLRLSGSVI
Trigger: TATTACTGACCCGCTCAGTCTCAATACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCGGCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTCCTCGGCCCTTTTCCTaGGAACCCTGGCCTCCACCC +
Preference number: 5 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFPRPFS*EPWPPP
Trigger: GGGTGGAGGCCAGGGTTCCAAGGAAAAGGGCCGAGG...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp TTCCTCTTCCCCCAGGTCCTTATGAGCAGCGAGGGCAGCCTCTTCACACTTTCTTTCCCATACTGGAACTaGCGCTGTTGCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: FLFPQVLMSSEGSLFTLSFPYWN*RCCFLK
Trigger: CTTCAAAAAGCAACAGCGCAAGTTCCAGTATGGGAA...AGAAAGTGTGAAGAGGCTGCCCTCGCTGCTCATAAGGACCTGGGGGAAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS TCA 90 bp GCTCATAGCTGGAGAAGCCCACGTCTGGGGATGTCAGGTAGGAACTaGACTGCTCTGGCTTCAATTGGATTCGGTAGTAGTTCTTGTAGA +
Preference number: 5 (lower is better)
Translates to: AHSWRSPRLGMSGRN*TALASIGFGSSSCR
Trigger: TCTACAAGAACTACTACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACATCCCCAGACGTGGGCTTCTCCAGCTATGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTTGAAGGCCGGATGTTaGAAGCCTCCCCCGCCTCCC +
Preference number: 5 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFLKAGC*KPPPPP
Trigger: GGGAGGCGGGGGAGGCTTCAAACATCCGGCCTTCAA...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS-3UTR CAA 90 bp AGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAGGGTCAGTAATATCTTaGGGGATGAGGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: RRKGLENLISSHLPCPKRGSVIS*GMRIST
Trigger: GGTGGAGATCCTCATCCCCAAAGATATTACTGACCC...TCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGCTGGAACTTGCGCTGTaGCTTTTTGAAGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NRRKGLENLISSHLPCPKLELAL*LFEACC
Trigger: GCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCAG...CTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCTGGAACTTGCGCTGTaGCTTTTTGAAGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SPWENRRKGLENLISSHLLELAL*LFEACC
Trigger: GCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCAG...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAAATCATACTCAGGTGTTaGGGCCTCCACCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: EAEAATEEKLSLQIQERKIILRC*GLHQVI
Trigger: GATGACCTGGTGGAGGCCCAAACACCTGAGTATGAT...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CCA 90 bp GGAGAAGCCCACGTCTGGGGATGTCAGGTAGGAACTGAACTGCTCTaGCTTCAATTGGATTCGGTAGTAGTTCTTGTAGATCGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: GEAHVWGCQVGTELL*LQLDSVVVLVDRFC
Trigger: ACAGAAACGATCTACAAGAACTACTACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACATCCCCAGACGTGGGCTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACGTAAGAGTCTTTCTCTaGCCATACGACGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNVRVFL*PYDDQG
Trigger: ACCCTGGTCGTCGTATGGCAAGAGAAAGACTCTTAC...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCCCATGCCCTAAGAGAACATGTGCTGTTCTCACATaGAAAACCCAACCCCCTCTC +
Preference number: 5 (lower is better)
Translates to: RKGLENLISSHLPCPKRTCAVLT*KTQPPL
Trigger: GAGAGGGGGTTGGGTTTTCAATGTGAGAACAGCACA...TGTTCTCTTAGGGCATGGGAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTCATCAGTGCAAGTATaGAGACTGAGCGGGTCAGTA +
Preference number: 5 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNSSVQV*RLSGSV
Trigger: TACTGACCCGCTCAGTCTCAATACTTGCACTGATGA...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACACGAAGACAACATTGTaGGGGAAGACTGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: RLRQRRKKSFLCRSKKGNTKTTL*GKTDVS
Trigger: GGACACATCAGTCTTCCCCAACAATGTTGTCTTCGT...GTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp TCTCCTTGGGAGAATAGGAGGAAAGGGCTAGAGAATTTGATATCCTCCCACCTCATCCAGGAGGCCCCCTaGAAAATATTCTCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: SPWENRRKGLENLISSHLIQEAP*KIFSAE
Trigger: TTCAGCAGAGAATATTTTCAAGGGGGCCTCCTGGAT...GAGGTGGGAGGATATCAAATTCTCTAGCCCTTTCCTCCTATTCTCCCAAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414441.5
CDS-3UTR CAA 90 bp CTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATGGGTCAGTAATATCTTaGGGGATGAGGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: LRQRRKKSFLCRSKKGNYGSVIS*GMRIST
Trigger: GGTGGAGATCCTCATCCCCAAAGATATTACTGACCC...ATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp GAGGCTGAGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAATTCCCATACTGGAACTaGCGCTGTTGCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: EAEAATEEKLSLQIQERKFPYWN*RCCFLK
Trigger: CTTCAAAAAGCAACAGCGCAAGTTCCAGTATGGGAA...TTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCTCAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCACTGGGGGATCGGGCCTaGTGGAACAGGTACACAGGA +
Preference number: 5 (lower is better)
Translates to: TEEKLSLQIQERKLFLESLGDRA*WNRYTG
Trigger: TCCTGTGTACCTGTTCCACAAGGCCCGATCCCCCAG...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTGTAAGAGTCTTTCTCTaGCCATACGACGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFVRVFL*PYDDQG
Trigger: ACCCTGGTCGTCGTATGGCAAGAGAAAGACTCTTAC...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp AGGCAGCGACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTGTGACGAAGACAACATaGTTGGGGAAGACTGATGTG +
Preference number: 5 (lower is better)
Translates to: RQRRKKSFLCRSKKGNYFVTKTT*LGKTDV
Trigger: CACATCAGTCTTCCCCAACAATGTTGTCTTCGTCAC...AAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGTCGCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCAACGAAGACAACATTGTaGGGGAAGACTGATGTGTCC +
Preference number: 5 (lower is better)
Translates to: TEEKLSLQIQERKLFLESTKTTL*GKTDVS
Trigger: GGACACATCAGTCTTCCCCAACAATGTTGTCTTCGT...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS-3UTR CAA 90 bp ACGGAAGAAAAGCTTTCTTTGCAGATCCAAGAAAGGAAACTATTTTTGGAGTCACTGCTCTGGCTTCAATaGGATTCGGTAGTAGTTCTT +
Preference number: 5 (lower is better)
Translates to: TEEKLSLQIQERKLFLESLLWLQ*DSVVVL
Trigger: AAGAACTACTACCGAATCCAATTGAAGCCAGAGCAG...TGACTCCAAAAATAGTTTCCTTTCTTGGATCTGCAAAGAAAGCTTTTCTTCCGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CCA 72 bp TTCCCGACCGACCGCAGCGGCTGGGGACCCCGCAGATaGCGCGCAACGACCCGGACCACGCTCCGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: FPTDRSGWGPRR*RATTRTTLRPA
Trigger: GGCGGGACGGAGCGTGGTCCGGGTCGTTGCGCGCCATCTGCGGGGTCCCCAGCCGCTGCGGTCGGTCGGGAA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS CCA 72 bp GGCAGCGATGGGACCCCGGCTGGCAGTCAGCGAGGCTaGGAAGCAGCTCCTCTTTCGAACGGTGGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: GSDGTPAGSQRG*EAAPLSNGGGP
Trigger: GGGACCACCACCGTTCGAAAGAGGAGCTGCTTCCCAGCCTCGCTGACTGCCAGCCGGGGTCCCATCGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CCA 72 bp GGGAAGACTGATGTGTCCGCTCCATCCAAGGGCACTTaGGGGGCAGCGATGGGACCCCGGCTGGCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: GKTDVSAPSKGT*GAAMGPRLAVS
Trigger: GCTGACTGCCAGCCGGGGTCCCATCGCTGCCCCCCAAGTGCCCTTGGATGGAGCGGACACATCAGTCTTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS GCA 72 bp CATACGACGACCAGGGTTGGGGCTCTAGGACCAGGATaGCCCCAGGGCGTAGGTGCCGGTAGATCCGGCGAA +
Preference number: 6 (lower is better)
Translates to: HTTTRVGALGPG*PQGVGAGRSGE
Trigger: TTCGCCGGATCTACCGGCACCTACGCCCTGGGGGCATCCTGGTCCTAGAGCCCCAACCCTGGTCGTCGTATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 90 bp GACGGGCCCCACTTGCAGGCAATGCTCAGGGTCAGATGGCCCACATaGCAGCCCAGATCTAGGACGTCCCGGCCCCGAAACCACTCAGGC +
Preference number: 6 (lower is better)
Translates to: DGPHLQAMLRVRWPT*QPRSRTSRPRNHSG
Trigger: GCCTGAGTGGTTTCGGGGCCGGGACGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGACCCTGAGCATTGCCTGCAAGTGGGGCCCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS TCA 72 bp CCTGAGGGACCCGTAGGCGGGGGACGGGAGCTGGTGTaGAAAGGTCTCCTTGACACCCGACCCTTGTTCCTG +
Preference number: 6 (lower is better)
Translates to: PEGPVGGGRELV*KGLLDTRPLFL
Trigger: CAGGAACAAGGGTCGGGTGTCAAGGAGACCTTTTCACACCAGCTCCCGTCCCCCGCCTACGGGTCCCTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479201.1
CDS GCA 72 bp CCCCAGGGCGTAGGTGCCGGTAGATCCGGCGAAACATaGGCTTCAGGCCCTCGTCTCCCCAGTTCAGATGCA +
Preference number: 6 (lower is better)
Translates to: PQGVGAGRSGET*ASGPRLPSSDA
Trigger: TGCATCTGAACTGGGGAGACGAGGGCCTGAAGCGCATGTTTCGCCGGATCTACCGGCACCTACGCCCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 72 bp GCCCCTGCCTCCGACTTGCTGGAAGTCCTGCGACGTTaGCGATGTCGGGAGGAGGAAGATGGGGGTGCAGAG +
Preference number: 6 (lower is better)
Translates to: APASDLLEVLRR*RCREEEDGGAE
Trigger: CTCTGCACCCCCATCTTCCTCCTCCCGACATCGCAAACGTCGCAGGACTTCCAGCAAGTCGGAGGCAGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS CAA 72 bp ACAGAGTCACAGTCCGAATTCACCCGCCTGCGCCTCTaGAAGGCCGGATGTTTGAAGCCTCCCCCGCCTCCC +
Preference number: 6 (lower is better)
Translates to: TESQSEFTRLRL*KAGCLKPPPPP
Trigger: GGGAGGCGGGGGAGGCTTCAAACATCCGGCCTTCAAGAGGCGCAGGCGGGTGAATTCGGACTGTGACTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310512.4
CDS CAA 72 bp TCGATATCCAGGCCCACCATGCGGGACGGGCCCCACTaGCAGGCAATGCTCAGGGTCAGATGGCCCACATTG +
Preference number: 6 (lower is better)
Translates to: SISRPTMRDGPH*QAMLRVRWPTL
Trigger: CAATGTGGGCCATCTGACCCTGAGCATTGCCTGCAAGTGGGGCCCGTCCCGCATGGTGGGCCTGGATATCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS GCA 72 bp CCCATACTGGAACTTGCGCTGTTGCTTTTTGAAGCCTaGTGCAGGCAGTGGGTGGTGGTGGTGGTGGCGGCC +
Preference number: 6 (lower is better)
Translates to: PILELALLLFEA*CRQWVVVVVAA
Trigger: GGCCGCCACCACCACCACCACCCACTGCCTGCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCAGTATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS CAA 72 bp CACTTGCAGGCAATGCTCAGGGTCAGATGGCCCACATaGCAGCCCAGATCTAGGACGTCCCGGCCCCGAAAC +
Preference number: 6 (lower is better)
Translates to: HLQAMLRVRWPT*QPRSRTSRPRN
Trigger: GTTTCGGGGCCGGGACGTCCTAGATCTGGGCTGCAATGTGGGCCATCTGACCCTGAGCATTGCCTGCAAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS CAA 90 bp CTGGGGTGGGAGACGCAGCTCCTCGGAAAGGTAGTGTCGGATGTTTaGGCGGGCAGAATGGATGAGCCGGGAATCGATATCCAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: LGWETQLLGKVVSDV*AGRMDEPGIDIQAH
Trigger: GTGGGCCTGGATATCGATTCCCGGCTCATCCATTCTGCCCGCCAAAACATCCGACACTACCTTTCCGAGGAGCTGCGTCTCCCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000497759.1
CDS GCA 72 bp ATACTGGAACTTGCGCTGTTGCTTTTTGAAGCCTGCTaGAGGCAGTGGGTGGTGGTGGTGGTGGCGGCCTCC +
Preference number: 6 (lower is better)
Translates to: ILELALLLFEAC*RQWVVVVVAAS
Trigger: GGAGGCCGCCACCACCACCACCACCCACTGCCTGCAGCAGGCTTCAAAAAGCAACAGCGCAAGTTCCAGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000479201.1
ENST00000497759.1
CDS GCA 72 bp AACATGCGCTTCAGGCCCTCGTCTCCCCAGTTCAGATaGACCCACTTGGTGAGGCTGAGGCAGAGCACCACA +
Preference number: 6 (lower is better)
Translates to: NMRFRPSSPQFR*THLVRLRQSTT
Trigger: TGTGGTGCTCTGCCTCAGCCTCACCAAGTGGGTGCATCTGAACTGGGGAGACGAGGGCCTGAAGCGCATGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS TCA 72 bp GCTGTCCCCGGTGTCTATGCCGCTTCCGACCAGTCTTaGGTGGCGAAGCAAGAACTACATGGCCCTCATCAG +
Preference number: 6 (lower is better)
Translates to: AVPGVYAASDQS*VAKQELHGPHQ
Trigger: CTGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCGGCATAGACACCGGGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 90 bp TGCTGGTGGTGCTGTCCCCGGTGTCTATGCCGCTTCCGACCAGTCTaGAGTGGCGAAGCAAGAACTACATGGCCCTCATCAGTGCAAGTA +
Preference number: 6 (lower is better)
Translates to: CWWCCPRCLCRFRPV*SGEARTTWPSSVQV
Trigger: TACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCGGCATAGACACCGGGGACAGCACCACCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 90 bp AACATGCGCTTCAGGCCCTCGTCTCCCCAGTTCAGATGCACCCACTaGGTGAGGCTGAGGCAGAGCACCACATCATACTCAGGTGTTTGG +
Preference number: 6 (lower is better)
Translates to: NMRFRPSSPQFRCTH*VRLRQSTTSYSGVW
Trigger: CCAAACACCTGAGTATGATGTGGTGCTCTGCCTCAGCCTCACCAAGTGGGTGCATCTGAACTGGGGAGACGAGGGCCTGAAGCGCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS TCA 72 bp AAAGGTAGTGTCGGATGTTTTGGCGGGCAGAATGGATaGGCCGGGAATCGATATCCAGGCCCACCATGCGGG +
Preference number: 6 (lower is better)
Translates to: KGSVGCFGGQNG*AGNRYPGPPCG
Trigger: CCCGCATGGTGGGCCTGGATATCGATTCCCGGCTCATCCATTCTGCCCGCCAAAACATCCGACACTACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000497759.1
CDS TCA 72 bp TGTGAAAAGGTCTCCTTGACACCCGACCCTTGTTCCTaGGGAATGAGTCTCAGCGGTCTCCGCCCGGCTCTA +
Preference number: 6 (lower is better)
Translates to: CEKVSLTPDPCS*GMSLSGLRPAL
Trigger: TAGAGCCGGGCGGAGACCGCTGAGACTCATTCCTCAGGAACAAGGGTCGGGTGTCAAGGAGACCTTTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479201.1
CDS CCA 72 bp TCCCCGGTGTCTATGCCGCTTCCGACCAGTCTTGAGTaGCGAAGCAAGAACTACATGGCCCTCATCAGTGCA +
Preference number: 6 (lower is better)
Translates to: SPVSMPLPTSLE*RSKNYMALISA
Trigger: TGCACTGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCGGCATAGACACCGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 72 bp TGCTGTCCCCGGTGTCTATGCCGCTTCCGACCAGTCTaGAGTGGCGAAGCAAGAACTACATGGCCCTCATCA +
Preference number: 6 (lower is better)
Translates to: CCPRCLCRFRPV*SGEARTTWPSS
Trigger: TGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAAGACTGGTCGGAAGCGGCATAGACACCGGGGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 72 bp TTCAGGCCCTCGTCTCCCCAGTTCAGATGCACCCACTaGGTGAGGCTGAGGCAGAGCACCACATCATACTCA +
Preference number: 6 (lower is better)
Translates to: FRPSSPQFRCTH*VRLRQSTTSYS
Trigger: TGAGTATGATGTGGTGCTCTGCCTCAGCCTCACCAAGTGGGTGCATCTGAACTGGGGAGACGAGGGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CCA 72 bp TCTTCACACTTTCTGTTTAGGGGGCCACTTAGTGGCTaGGGGATCGGGCCTTGTGGAACAGGTACACAGGAC +
Preference number: 6 (lower is better)
Translates to: SSHFLFRGPLSG*GIGPCGTGTQD
Trigger: GTCCTGTGTACCTGTTCCACAAGGCCCGATCCCCCAGCCACTAAGTGGCCCCCTAAACAGAAAGTGTGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 72 bp GAGACGCAGCTCCTCGGAAAGGTAGTGTCGGATGTTTaGGCGGGCAGAATGGATGAGCCGGGAATCGATATC +
Preference number: 6 (lower is better)
Translates to: ETQLLGKVVSDV*AGRMDEPGIDI
Trigger: GATATCGATTCCCGGCTCATCCATTCTGCCCGCCAAAACATCCGACACTACCTTTCCGAGGAGCTGCGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310512.4
ENST00000414441.5
ENST00000497759.1
CDS CAA 90 bp CCCTCATCAGTGCAAGTATTGAGACTGAGCGGGTCAGTAATATCTTaGGGGATGAGGATCTCCACCGGATCTCGCCCTTTGGCCGGAAGG +
Preference number: 6 (lower is better)
Translates to: PSSVQVLRLSGSVIS*GMRISTGSRPLAGR
Trigger: CCTTCCGGCCAAAGGGCGAGATCCGGTGGAGATCCTCATCCCCAAAGATATTACTGACCCGCTCAGTCTCAATACTTGCACTGATGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS TCA 72 bp TGGAGAAGCCCACGTCTGGGGATGTCAGGTAGGAACTaGACTGCTCTGGCTTCAATTGGATTCGGTAGTAGT +
Preference number: 6 (lower is better)
Translates to: WRSPRLGMSGRN*TALASIGFGSS
Trigger: ACTACTACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACATCCCCAGACGTGGGCTTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 90 bp TTGAGTGGCGAAGCAAGAACTACATGGCCCTCATCAGTGCAAGTATaGAGACTGAGCGGGTCAGTAATATCTTTGGGGATGAGGATCTCC +
Preference number: 6 (lower is better)
Translates to: LSGEARTTWPSSVQV*RLSGSVISLGMRIS
Trigger: GGAGATCCTCATCCCCAAAGATATTACTGACCCGCTCAGTCTCAATACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTCGCCACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 72 bp GAAGCAAGAACTACATGGCCCTCATCAGTGCAAGTATaGAGACTGAGCGGGTCAGTAATATCTTTGGGGATG +
Preference number: 6 (lower is better)
Translates to: EARTTWPSSVQV*RLSGSVISLGM
Trigger: CATCCCCAAAGATATTACTGACCCGCTCAGTCTCAATACTTGCACTGATGAGGGCCATGTAGTTCTTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 90 bp CACGTCTGGGGATGTCAGGTAGGAACTGAACTGCTCTGGCTTCAATaGGATTCGGTAGTAGTTCTTGTAGATCGTTTCTGTAAGAGTCTT +
Preference number: 6 (lower is better)
Translates to: HVWGCQVGTELLWLQ*DSVVVLVDRFCKSL
Trigger: AAGACTCTTACAGAAACGATCTACAAGAACTACTACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACATCCCCAGACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5
CDS CAA 72 bp GGATGTCAGGTAGGAACTGAACTGCTCTGGCTTCAATaGGATTCGGTAGTAGTTCTTGTAGATCGTTTCTGT +
Preference number: 6 (lower is better)
Translates to: GCQVGTELLWLQ*DSVVVLVDRFC
Trigger: ACAGAAACGATCTACAAGAACTACTACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310512.4
ENST00000414441.5