RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MELK (Homo sapiens)

Ensembl gene IDs: ENSG00000165304

Ensembl transcript IDs: ENST00000298048.7, ENST00000480021.1, ENST00000487398.3, ENST00000489766.5, ENST00000495529.5, ENST00000536329.5, ENST00000536860.5, ENST00000536987.5, ENST00000541717.4, ENST00000543751.5, ENST00000545008.5, ENST00000625974.2, ENST00000626154.2, ENST00000627766.2

Found 333 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACACTTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTaGTTGAGATCCAATTCCACTGAGCGGCACCGCCTCTCAGGGCTA +
Preference number: 1 (lower is better)
Translates to: NTLAPFLFGVSSICA*LRSNSTERHRLSGL
Trigger: TAGCCCTGAGAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR TCA 90 bp TCGCCCTTAAGCCGCTGCCTCCTGATACCCACCACATCGGGTTTTTaGAGCTGGCACACTTCTAATTCAAATTGCATTGTCACTTTCCCA +
Preference number: 1 (lower is better)
Translates to: SPLSRCLLIPTTSGF*SWHTSNSNCIVTFP
Trigger: TGGGAAAGTGACAATGCAATTTGAATTAGAAGTGTGCCAGCTTCAAAAACCCGATGTGGTGGGTATCAGGAGGCAGCGGCTTAAGGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR CAA 90 bp ACTTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTaGAGATCCAATTCCACTGAGCGGCACCGCCTCTCAGGGCTAATG +
Preference number: 2 (lower is better)
Translates to: TLAPFLFGVSSICAW*RSNSTERHRLSGLM
Trigger: CATTAGCCCTGAGAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp GTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTGAGCGGCACCGCCTCAGAAATCCGTTTCTTTaGGTCCACCTGCAGCATTTG +
Preference number: 2 (lower is better)
Translates to: VSSICAWLRSNSTERHRLRNPFL*VHLQHL
Trigger: CAAATGCTGCAGGTGGACCCAAAGAAACGGATTTCT...GAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR TCA 90 bp TTCCTTTTGCTCCTGGTGAGCACAGTGATAACCTTATCCAACCCCCTTTCAAGGGTACTTGGTAAACTGTaGTGTTCGGGGAGTAGCAGC +
Preference number: 2 (lower is better)
Translates to: FLLLLVSTVITLSNPLSRVLGKL*CSGSSS
Trigger: GCTGCTACTCCCCGAACATCACAGTTTACCAAGTAC...CCTTGAAAGGGGGTTGGATAAGGTTATCACTGTGCTCACCAGGAGCAAAAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTATTCCCCGAGCCTTCTTaGCTAGAAGCAGAAGATAGG +
Preference number: 2 (lower is better)
Translates to: HPHSSGRMEESINYTLQLFPEPS*LEAEDR
Trigger: CCTATCTTCTGCTTCTAGCCAAGAAGGCTCGGGGAA...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR GCA 90 bp GAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGTCTGTTCCTTATTTGCAGGTGTTCTaGATAAGGCTGGAGTTAATG +
Preference number: 2 (lower is better)
Translates to: ERHRLSGLMTPVINLSVPYLQVF*IRLELM
Trigger: CATTAACTCCAGCCTTATGCAGAACACCTGCAAATA...AGGAACAGACAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR CAA 90 bp ACAGTGATAACCTTATCCAACCCCCTTTCAAGGCTCCCAAACACTTaGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTG +
Preference number: 2 (lower is better)
Translates to: TVITLSNPLSRLPNT*APFLFGVSSICAWL
Trigger: CAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCTTGAAAGGGGGTTGGATAAGGTTATCACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR TCA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTAACCACATCGGGTTTTTaGAGCTGGCACACTTCTAAT +
Preference number: 2 (lower is better)
Translates to: HPHSSGRMEESINYTLQLTTSGF*SWHTSN
Trigger: ATTAGAAGTGTGCCAGCTTCAAAAACCCGATGTGGT...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR GCA 90 bp AATTCCACTGAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGTATTTGCAGGTGTTCTaGATAAGGCTGGAGTTAATG +
Preference number: 2 (lower is better)
Translates to: NSTERHRLSGLMTPVINLYLQVF*IRLELM
Trigger: CATTAACTCCAGCCTTATGCAGAACACCTGCAAATA...CAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTCAGTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp TTTCAAGGCTCCCAAACACTTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAA +
Preference number: 2 (lower is better)
Translates to: FQGSQTLWLPFFLESPPYEAECY*ERATWE
Trigger: TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTC...ATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp TTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGATCCAACTTGATGTCTGTGAATaGGGTAGCACTGGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: FGSLSFWSLLHMCLVEIQLDVCE*GSTGLS
Trigger: GGACAAGCCAGTGCTACCCCATTCACAGACATCAAG...TTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR TCA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTACTGGTTTCTAGCTTTTaGGGGTGTAGTGTAACGATT +
Preference number: 2 (lower is better)
Translates to: HPHSSGRMEESINYTLQLLVSSF*GCSVTI
Trigger: AATCGTTACACTACACCCTCAAAAGCTAGAAACCAG...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR GCA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTAAGTCTCCTCCATATGTaGTTGGTTGAGATCCAATTC +
Preference number: 2 (lower is better)
Translates to: HPHSSGRMEESINYTLQLSLLHM*LVEIQF
Trigger: GAATTGGATCTCAACCAAGCACATATGGAGGAGACT...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp CATCGGGTTTTTGAAGCTGGCACACTTCTAATTCAAATTGCATTGTCACTTTCCGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAA +
Preference number: 2 (lower is better)
Translates to: HRVFEAGTLLIQIALSLSEAECY*ERATWE
Trigger: TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTC...GGAAAGTGACAATGCAATTTGAATTAGAAGTGTGCCAGCTTCAAAAACCCGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR CAA 90 bp ACTGAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTaGTCTGTTCCTGTTGAATTTACTGGTATTTTAATTGGAGTTTCT +
Preference number: 2 (lower is better)
Translates to: TERHRLSGLMTPVIN*SVPVEFTGILIGVS
Trigger: AGAAACTCCAATTAAAATACCAGTAAATTCAACAGGAACAGACAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp CCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTGTTTCTTTCAGGCACTaGTTTCTAGCTTTTGAGGGT +
Preference number: 2 (lower is better)
Translates to: PFLFGVSSICAWLRSNSTVSFRH*FLAFEG
Trigger: ACCCTCAAAAGCTAGAAACCAGTGCCTGAAAGAAAC...AGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp CAAAATCTGACTGTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAATTCTGGGCCCGTCTCTaGCAGAACCCTTCCTTTTGC +
Preference number: 2 (lower is better)
Translates to: QNLTVFDTSVYNPFVQSQFWARL*QNPSFC
Trigger: GCAAAAGGAAGGGTTCTGCCAGAGACGGGCCCAGAA...TTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACACAGTCAGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR TCA 90 bp TTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGATCCAATGCCTGTTGTTTCTGTaGTGTACAGAAAGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: FGSLSFWSLLHMCLVEIQCLLFL*CTESSV
Trigger: AACAGAACTTTCTGTACATCACAGAAACAACAGGCA...TTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR GCA 90 bp CCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTAGATTGTACAAAGTCAACATaGTTCTTTGGAAGAATAGAC +
Preference number: 2 (lower is better)
Translates to: PHSSGRMEESINYTLQLDCTKST*FFGRID
Trigger: GTCTATTCTTCCAAAGAAGCATGTTGACTTTGTACA...ATCTAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp AATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAA +
Preference number: 2 (lower is better)
Translates to: NKRILALPLNRIVVILHDEAECY*ERATWE
Trigger: TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTC...ATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR TCA 90 bp GTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAACATGCTTCTTTGTGCCTGTTGTTTCTGTaGTGTACAGAAAGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: VFDTSVYNPFVQSQHASLCLLFL*CTESSV
Trigger: AACAGAACTTTCTGTACATCACAGAAACAACAGGCA...CAAAGAAGCATGTTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR TCA 90 bp CAAAATCTGACTGTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAACAGACTCCAATTATTTaGCTTGATGTCTGTGAATGG +
Preference number: 2 (lower is better)
Translates to: QNLTVFDTSVYNPFVQSQQTPII*LDVCEW
Trigger: CCATTCACAGACATCAAGTCAAATAATTGGAGTCTG...TTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACACAGTCAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CCA 90 bp GTTCCTGTTGAATTTACTGGTATTTTAATTGGAGTTTCTTTCAGGCACTGGTTTTGCATGATCCAGGGATaGTTCAATAGATTTTTCATA +
Preference number: 2 (lower is better)
Translates to: VPVEFTGILIGVSFRHWFCMIQG*FNRFFI
Trigger: TATGAAAAATCTATTGAACCATCCCTGGATCATGCA...AAACCAGTGCCTGAAAGAAACTCCAATTAAAATACCAGTAAATTCAACAGGAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR CCA 72 bp GCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTaGTTGAGATCCAATTCCACTGAGCGGCACCGCCTC +
Preference number: 3 (lower is better)
Translates to: APFLFGVSSICA*LRSNSTERHRL
Trigger: GAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR TCA 72 bp CCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTaGGATCCAATTCCACTGAGCGGCACCGCCTCTCAG +
Preference number: 3 (lower is better)
Translates to: PFFLESPPYVLG*DPIPLSGTASQ
Trigger: CTGAGAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR TCA 72 bp AGCCGCTGCCTCCTGATACCCACCACATCGGGTTTTTaGAGCTGGCACACTTCTAATTCAAATTGCATTGTC +
Preference number: 3 (lower is better)
Translates to: SRCLLIPTTSGF*SWHTSNSNCIV
Trigger: GACAATGCAATTTGAATTAGAAGTGTGCCAGCTTCAAAAACCCGATGTGGTGGGTATCAGGAGGCAGCGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR CCA 72 bp CCTTATCCAACCCCCTTTCAAGGCTCCCAAACACTTTaGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTG +
Preference number: 3 (lower is better)
Translates to: PYPTPFQGSQTL*LPFFLESPPYV
Trigger: CACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCTTGAAAGGGGGTTGGATAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CAA 90 bp AATTCCACTGAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGAGGATAGTTGTAATCTaGCATGATCCAGGGATGGTT +
Preference number: 3 (lower is better)
Translates to: NSTERHRLSGLMTPVINLRIVVI*HDPGMV
Trigger: AACCATCCCTGGATCATGCAAGATTACAACTATCCT...CAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTCAGTGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR CCA 72 bp CCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAACATCATATTTTCCTC +
Preference number: 3 (lower is better)
Translates to: PPAAFVEEAECY*ERATWEHHIFL
Trigger: GAGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CAA 90 bp AGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATCCAGGGCTGGGAGAGAGCCACTaGGGAACATCATATTTTCCT +
Preference number: 3 (lower is better)
Translates to: RILALPLNRIVVILHDPGLGESH*GTSYFP
Trigger: AGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAG...CCCTGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
3UTR CCA 72 bp TTCAAGGCTCCCAAACACTTTGGCTCCCTTTCTTTTTaGAGTCTCCTCCATATGTGCTTGGTTGAGATCCAA +
Preference number: 3 (lower is better)
Translates to: FKAPKHFGSLSF*SLLHMCLVEIQ
Trigger: TTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CAA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTACAGTGTATAACCCTTTaGTACAAAGTCAACATGCTT +
Preference number: 3 (lower is better)
Translates to: HPHSSGRMEESINYTLQLQCITL*YKVNML
Trigger: AAGCATGTTGACTTTGTACAAAAGGGTTATACACTG...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CAA 90 bp GAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCTGGGAGAGAGCCACTaGGGAACATCATATTTTCCT +
Preference number: 3 (lower is better)
Translates to: EVNKRILALPLNRIVVILLGESH*GTSYFP
Trigger: AGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAG...CAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CAA 90 bp GTTCCTGTTGAATTTACTGGTATTTTAATTGGAGTTTCTTTCAGGCACTGGTTTTGGGGTAGCACTGGCTaGTCCACAGGAGAAAGAAGA +
Preference number: 3 (lower is better)
Translates to: VPVEFTGILIGVSFRHWFWGSTG*STGERR
Trigger: TCTTCTTTCTCCTGTGGACAAGCCAGTGCTACCCCA...AAACCAGTGCCTGAAAGAAACTCCAATTAAAATACCAGTAAATTCAACAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CAA 90 bp GTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAACATGCTTCTTTGCTCCTCCATATGTGCTaGGTTGAGATCCAATTCCAC +
Preference number: 3 (lower is better)
Translates to: VFDTSVYNPFVQSQHASLLLHMC*VEIQFH
Trigger: GTGGAATTGGATCTCAACCAAGCACATATGGAGGAG...CAAAGAAGCATGTTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CAA 90 bp GTTCCTGTTGAATTTACTGGTATTTTAATTGGAGTTTCTTTCAGGCACTGGTTTGTCCACCTGCAGCATTaGTTGAAGAAGCAGAATGCT +
Preference number: 3 (lower is better)
Translates to: VPVEFTGILIGVSFRHWFVHLQH*LKKQNA
Trigger: AGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGAC...AAACCAGTGCCTGAAAGAAACTCCAATTAAAATACCAGTAAATTCAACAGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR-3UTR CAA 90 bp CAAAATCTGACTGTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAAGATTCTGTCCAGTACTaGGTAAACTGTGATGTTCGG +
Preference number: 3 (lower is better)
Translates to: QNLTVFDTSVYNPFVQSQDSVQY*VNCDVR
Trigger: CCGAACATCACAGTTTACCAAGTACTGGACAGAATC...TTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACACAGTCAGATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR TCA 72 bp GAAATTAAATCCTCCATTGTTTGCCTGTTGTTTCTGTaGTGTACAGAAAGTTCTGTTACGCAATCATCATCG +
Preference number: 3 (lower is better)
Translates to: EIKSSIVCLLFL*CTESSVTQSSS
Trigger: CGATGATGATTGCGTAACAGAACTTTCTGTACATCACAGAAACAACAGGCAAACAATGGAGGATTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGGCGGAGGGCACGGCTaGGCGGCGCCCGACAGAAGG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRGGGHG*AAPDRR
Trigger: CCTTCTGTCGGGCGCCGCTCAGCCGTGCCCTCCGCC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATTCCACTGAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGTCGATCGCCGGGTTGTaGCCGCTTCCGCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: NSTERHRLSGLMTPVINLSIAGL*PLPPAK
Trigger: CTTGGCGGGCGGAAGCGGCCACAACCCGGCGATCGA...CAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTCAGTGGAATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR TCA 90 bp TCCGTTTCTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGAGGGGCCTGCTGTCCTaGGAGACGCGGCTGGTACGG +
Preference number: 4 (lower is better)
Translates to: SVSLGPPAAFVEEAECYWRGLLS*ETRLVR
Trigger: CCGTACCAGCCGCGTCTCTCAGGACAGCAGGCCCCT...CCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAGAAACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000625974.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTAAGGGGCCTGCTGTCCTaGGAGACGCGGCTGGTACGG +
Preference number: 4 (lower is better)
Translates to: HPHSSGRMEESINYTLQLRGLLS*ETRLVR
Trigger: CCGTACCAGCCGCGTCTCTCAGGACAGCAGGCCCCT...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGGGGCCTGCTGTCCTaGGAGACGCGGCTGGTACGG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRRGLLS*ETRLVR
Trigger: CCGTACCAGCCGCGTCTCTCAGGACAGCAGGCCCCT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000627766.2
CDS-3UTR GCA 90 bp CTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGAGAAGGACAGGGGCCTaGTGTCCTGAGAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: LWVHLQHLLKKQNATGRERRTGA*CPERRG
Trigger: GCCGCGTCTCTCAGGACAGCAGGCCCCTGTCCTTCT...CTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTCGATCGCCGGGTTGTaGCCGCTTCCGCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSIAGL*PLPPAK
Trigger: CTTGGCGGGCGGAAGCGGCCACAACCCGGCGATCGA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536329.5
ENST00000536860.5
ENST00000541717.4
ENST00000543751.5
ENST00000627766.2
CDS-3UTR TCA 90 bp AATTCCACTGAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGCCGGGTCTCCTCTTCTaGCAGGCGATCCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: NSTERHRLSGLMTPVINLPGLLF*QAILGN
Trigger: ATTTCCCAGGATCGCCTGTCAGAAGAGGAGACCCGG...CAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTCAGTGGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGAAGGACAGGGGCCTaGTGTCCTGAGAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRRRTGA*CPERRG
Trigger: GCCGCGTCTCTCAGGACAGCAGGCCCCTGTCCTTCT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTGAGCGGCACCGCCTCGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: VSSICAWLRSNSTERHRLEAECY*ERATWE
Trigger: TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTC...GAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGGGGCCTGCTGTCCTaGGAGACGCGGCTGGTACGG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIRGLLS*ETRLVR
Trigger: CCGTACCAGCCGCGTCTCTCAGGACAGCAGGCCCCT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000627766.2
CDS-3UTR TCA 90 bp GAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGTCTGTTCCTGCAAATTTTCTGGCTTaGGGTCCCTGTGAGCATAGC +
Preference number: 4 (lower is better)
Translates to: ERHRLSGLMTPVINLSVPANFLA*GPCEHS
Trigger: GCTATGCTCACAGGGACCTCAAGCCAGAAAATTTGC...AGGAACAGACAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGAGATCCAATTCCACTaGGCGGCACCGCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIREIQFH*AAPPLR
Trigger: CCTGAGAGGCGGTGCCGCTCAGTGGAATTGGATCTC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp GAGAAAGAAGAAAGCCTTAAACGAACTGGTTTTCCCCGAGCCTTCTTGGCTAGAGAGATCCAATTCCACTaGGCGGCACCGCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: EKEESLKRTGFPRAFLAREIQFH*AAPPLR
Trigger: CCTGAGAGGCGGTGCCGCTCAGTGGAATTGGATCTC...TCTAGCCAAGAAGGCTCGGGGAAAACCAGTTCGTTTAAGGCTTTCTTCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGTTCTGGGCCCGTCTCTaGCAGAACCCTTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LWVHLQHLLKKQNATGREFWARL*QNPSFC
Trigger: GCAAAAGGAAGGGTTCTGCCAGAGACGGGCCCAGAA...CTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTCGATCGCCGGGTTGTaGCCGCTTCCGCCCGCCAAG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLISIAGL*PLPPAK
Trigger: CTTGGCGGGCGGAAGCGGCCACAACCCGGCGATCGA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536329.5
ENST00000536860.5
ENST00000541717.4
ENST00000543751.5
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCCGGGTCTCCTCTTCTaGCAGGCGATCCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRPGLLF*QAILGN
Trigger: ATTTCCCAGGATCGCCTGTCAGAAGAGGAGACCCGG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGACAGCAGATACTATCTaGCGGAAGACAACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LWVHLQHLLKKQNATGRETADTI*RKTTRV
Trigger: GACCCGGGTTGTCTTCCGTCAGATAGTATCTGCTGT...CTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp GTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTGAGCGGCACCGCCTCACCACATCGGGTTTTTaGAGCTGGCACACTTCTAAT +
Preference number: 4 (lower is better)
Translates to: VSSICAWLRSNSTERHRLTTSGF*SWHTSN
Trigger: ATTAGAAGTGTGCCAGCTTCAAAAACCCGATGTGGT...GAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATTCCACTGAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGCCTCAATCTCCGTTTTaGTCCGGGGCAAATCACTCT +
Preference number: 4 (lower is better)
Translates to: NSTERHRLSGLMTPVINLPQSPF*SGANHS
Trigger: AGAGTGATTTGCCCCGGATCAAAACGGAGATTGAGG...CAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTCAGTGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACATCGCCTGGGCGACACAGTaGAACTCCATCTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: QHLLKKQNATGREPLGNIAWATQ*NSISDP
Trigger: TGGATCAGAGATGGAGTTTCACTGTGTCGCCCAGGC...GATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTCGCCCTTAAGCCGCTaGCTCCTGATACCCACCACA +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSPLSR*LLIPTT
Trigger: TGTGGTGGGTATCAGGAGGCAGCGGCTTAAGGGCGA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp GGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTCATGCTCCAAACATCTaGAGTCCCAGCTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: GPPAAFVEEAECYWERATHAPNI*SPSYSE
Trigger: TTCCGAGTAGCTGGGACTGCAGATGTTTGGAGCATG...AGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625974.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGTCTGTTCCTGGCTCCCTTTCTTTTTaGAGTCTCCTCCATATGTGC +
Preference number: 4 (lower is better)
Translates to: ERHRLSGLMTPVINLSVPGSLSF*SLLHMC
Trigger: GCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCC...AGGAACAGACAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR CAA 72 bp CCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTaGAGATCCAATTCCACTGAGCGGCACCGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PFLFGVSSICAW*RSNSTERHRLS
Trigger: TGAGAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGATTAGAAAAAGAACCTaGGGGGCGGAGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRIRKRT*GAEGTA
Trigger: AGCCGTGCCCTCCGCCCCTCAGGTTCTTTTTCTAAT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000627766.2
CDS-3UTR TCA 90 bp AAATCCGTTTCTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACCCGGGTCTCCTCTTCTaGCAGGCGATCCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: KSVSLGPPAAFVEEAECYPGLLF*QAILGN
Trigger: ATTTCCCAGGATCGCCTGTCAGAAGAGGAGACCCGG...GTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAGAAACGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGGCAAATTTTCTGGCTTaGGGTCCCTGTGAGCATAGC +
Preference number: 4 (lower is better)
Translates to: LWVHLQHLLKKQNATGREANFLA*GPCEHS
Trigger: GCTATGCTCACAGGGACCTCAAGCCAGAAAATTTGC...CTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp GTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTGAGCGGCACCGCCTCCTGGTTTCTAGCTTTTaGGGGTGTAGTGTAACGATT +
Preference number: 4 (lower is better)
Translates to: VSSICAWLRSNSTERHRLLVSSF*GCSVTI
Trigger: AATCGTTACACTACACCCTCAAAAGCTAGAAACCAG...GAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp GTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTGAGCGGCACCGCCTCCACTTTCCCAAAATCTaGCTGTGTTTGACACTTCAG +
Preference number: 4 (lower is better)
Translates to: VSSICAWLRSNSTERHRLHFPKI*LCLTLQ
Trigger: CTGAAGTGTCAAACACAGTCAGATTTTGGGAAAGTG...GAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGAAGGACAGGGGCCTaGTGTCCTGAGAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIRRTGA*CPERRG
Trigger: GCCGCGTCTCTCAGGACAGCAGGCCCCTGTCCTTCT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AAATCCGTTTCTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACCCAAGAGTCGGAGGTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: KSVSLGPPAAFVEEAECYPRVGG*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACCTCCGACTCTTGG...GTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAGAAACGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625974.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCCTGAGAGACGCGGCTaGTACGGCGTTCCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRPERRG*YGVPKN
Trigger: ATTCTTAGGAACGCCGTACCAGCCGCGTCTCTCAGG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTTCTGGGCCCGTCTCTaGCAGAACCCTTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRFWARL*QNPSFC
Trigger: GCAAAAGGAAGGGTTCTGCCAGAGACGGGCCCAGAA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCCTCAATCTCCGTTTTaGTCCGGGGCAAATCACTCC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRPQSPF*SGANHS
Trigger: GGAGTGATTTGCCCCGGATCAAAACGGAGATTGAGG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGACAGCAGATACTATCTaGCGGAAGACAACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRTADTI*RKTTRV
Trigger: GACCCGGGTTGTCTTCCGTCAGATAGTATCTGCTGT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp GTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTGAGCGGCACCGCCTCCAGACTCCAATTATTTaGCTTGATGTCTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: VSSICAWLRSNSTERHRLQTPII*LDVCEW
Trigger: CCATTCACAGACATCAAGTCAAATAATTGGAGTCTG...GAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGAGATCCAATTCCACTaGGCGGCACCGCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIEIQFH*AAPPLR
Trigger: CCTGAGAGGCGGTGCCGCTCAGTGGAATTGGATCTC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp TTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACATCATATTTTCGCCCTTAAGCCGCTaGCTCCTGATACCCACCACA +
Preference number: 4 (lower is better)
Translates to: LLKKQNATGREPLGNIIFSPLSR*LLIPTT
Trigger: TGTGGTGGGTATCAGGAGGCAGCGGCTTAAGGGCGA...AAATATGATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp TTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACATCATATTTCCAAGAGTCGGAGGTTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: LLKKQNATGREPLGNIIFPRVGG*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCAACCTCCGACTCTTGG...AAATATGATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625974.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATTCCACTGAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGATAACAGTATGCCCATaGTCCAAACATCTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: NSTERHRLSGLMTPVINLITVCP*SKHLQS
Trigger: GGACTGCAGATGTTTGGAGCATGGGCATACTGTTAT...CAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTCAGTGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR CCA 90 bp TTTCAAGGCTCCCAAACACTTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATCCTGAGAGACGCGGCTaGTACGGCGTTCCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: FQGSQTLWLPFFLESPPYPERRG*YGVPKN
Trigger: ATTCTTAGGAACGCCGTACCAGCCGCGTCTCTCAGG...ATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR CCA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTAGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: HPHSSGRMEESINYTLQLEAECY*ERATWE
Trigger: TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTC...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATCCAGGGATGGTTTTCTGGGCCCGTCTCTaGCAGAACCCTTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: LALPLNRIVVILHDPGMVFWARL*QNPSFC
Trigger: GCAAAAGGAAGGGTTCTGCCAGAGACGGGCCCAGAA...AACCATCCCTGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGAAGCTTTAGTCTTCTaGGCCCGTCTCTGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIREALVF*ARLWQN
Trigger: GTTCTGCCAGAGACGGGCCCAGAAGACTAAAGCTTC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTATGGCAGGCAAGTTTaGCCTTTGCAAAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRYGRQV*PLQSHL
Trigger: CAGGTGGCTTTGCAAAGGTCAAACTTGCCTGCCATA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCCGGGTCTCCTCTTCTaGCAGGCGATCCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIPGLLF*QAILGN
Trigger: ATTTCCCAGGATCGCCTGTCAGAAGAGGAGACCCGG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AGAAAGAAGAAAGCCTTAAACGAACTGGTTTTCCCCGAGCCTTCTTGGCTAGAAACAGCAGATACTATCTaGCGGAAGACAACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RKKKALNELVFPEPSWLETADTI*RKTTRV
Trigger: GACCCGGGTTGTCTTCCGTCAGATAGTATCTGCTGT...TTCTAGCCAAGAAGGCTCGGGGAAAACCAGTTCGTTTAAGGCTTTCTTCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGCAAATTTTCTGGCTTaGGGTCCCTGTGAGCATAGC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRANFLA*GPCEHS
Trigger: GCTATGCTCACAGGGACCTCAAGCCAGAAAATTTGC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGTACTTGGTAAACTGTaGTGTTCGGGGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRVLGKL*CSGSSS
Trigger: GCTGCTACTCCCCGAACATCACAGTTTACCAAGTAC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp GTCCAGTACTTGGTAAACTGTGATGTTCGGGGAGTAGCAGCACCTGTTGATAAAGTACTTGGTAAACTGTaGTGTTCGGGGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VQYLVNCDVRGVAAPVDKVLGKL*CSGSSS
Trigger: GCTGCTACTCCCCGAACATCACAGTTTACCAAGTAC...TTTATCAACAGGTGCTGCTACTCCCCGAACATCACAGTTTACCAAGTACTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACAGATTCCACCCCATTTaGTTCTGTCCAGTACTTGGT +
Preference number: 4 (lower is better)
Translates to: LQHLLKKQNATGREPLGNRFHPI*FCPVLG
Trigger: ACCAAGTACTGGACAGAATCAAATGGGGTGGAATCT...GTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCCTCAATCTCCGTTTTaGTCCGGGGCAAATCACTCT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRPQSPF*SGANHS
Trigger: AGAGTGATTTGCCCCGGATCAAAACGGAGATTGAGG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536987.5
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTCGCCCTTAAGCCGCTaGCTCCTGATACCCACCACA +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLISPLSR*LLIPTT
Trigger: TGTGGTGGGTATCAGGAGGCAGCGGCTTAAGGGCGA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCATGCTCCAAACATCTaGAGTCCCAGCTACTCGGAA +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRHAPNI*SPSYSE
Trigger: TTCCGAGTAGCTGGGACTGCAGATGTTTGGAGCATG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR CCA 90 bp TTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACATCATATTTCCTGAGAGACGCGGCTaGTACGGCGTTCCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLKKQNATGREPLGNIIFPERRG*YGVPKN
Trigger: ATTCTTAGGAACGCCGTACCAGCCGCGTCTCTCAGG...AAATATGATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625974.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIREAECY*ERATWE
Trigger: TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTTCCCCGAGCCTTCTTaGCTAGAAGCAGAAGATAGG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRFPEPS*LEAEDR
Trigger: CCTATCTTCTGCTTCTAGCCAAGAAGGCTCGGGGAA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCTTGATGTCTGTGAATaGGGTAGCACTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRLDVCE*GSTGLS
Trigger: GGACAAGCCAGTGCTACCCCATTCACAGACATCAAG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTGAGCGGCACCGCCTCTGTAGTGTAACGATTTaGCGTAGTGAGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: VSSICAWLRSNSTERHRLCSVTI*RSEYFS
Trigger: AGAGAAATACTCACTACGCCAAATCGTTACACTACA...GAGGCGGTGCCGCTCAGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp TTCCTTTTGCTCCTGGTGAGCACAGTGATAACCTTATCCAACCCCCTTTCAAGGGGCTCCCAAACACTTTaGCTCCCTTTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVSTVITLSNPLSRGSQTL*LPFFLE
Trigger: CTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCC...CCTTGAAAGGGGGTTGGATAAGGTTATCACTGTGCTCACCAGGAGCAAAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCATTAGAAAAAGAACCTaGGGGGCGGAGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIIRKRT*GAEGTA
Trigger: AGCCGTGCCCTCCGCCCCTCAGGTTCTTTTTCTAAT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCCATATGTGCTTGGTTaGGATCCAATTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRPYVLG*DPIPLS
Trigger: GCTCAGTGGAATTGGATCTCAACCAAGCACATATGG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATAGAAGGACAGGGGCCTaGTGTCCTGAGAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: NKRILALPLNRIVVILHDRRTGA*CPERRG
Trigger: GCCGCGTCTCTCAGGACAGCAGGCCCCTGTCCTTCT...ATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CTCAGGAAACATAAAGTACTCTTCATTCTTTACAGCAGACTTAGGAGTATATACAGAAGGACAGGGGCCTaGTGTCCTGAGAGACGCGGC +
Preference number: 4 (lower is better)
Translates to: LRKHKVLFILYSRLRSIYRRTGA*CPERRG
Trigger: GCCGCGTCTCTCAGGACAGCAGGCCCCTGTCCTTCT...GTATATACTCCTAAGTCTGCTGTAAAGAATGAAGAGTACTTTATGTTTCCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp ATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTCGCCCTTAAGCCGCTaGCTCCTGATACCCACCACA +
Preference number: 4 (lower is better)
Translates to: IEVNKRILALPLNRIVVISPLSR*LLIPTT
Trigger: TGTGGTGGGTATCAGGAGGCAGCGGCTTAAGGGCGA...GATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCCTGAGAGACGCGGCTaGTACGGCGTTCCTAAGAAT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIPERRG*YGVPKN
Trigger: ATTCTTAGGAACGCCGTACCAGCCGCGTCTCTCAGG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000627766.2
CDS-3UTR CCA 90 bp GCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACATAAACAGCAAATTTTCTaGCTTGAGGTCCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AAFVEEAECYWERATWEHKQQIF*LEVPVS
Trigger: GCTCACAGGGACCTCAAGCCAGAAAATTTGCTGTTT...ATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATCCAGGGATGGTTGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: LALPLNRIVVILHDPGMVEAECY*ERATWE
Trigger: TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTC...AACCATCCCTGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTCTTGATGTCTGTGAATaGGGTAGCACTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: PFLFGVSSICAWLRSNSTLDVCE*GSTGLS
Trigger: GGACAAGCCAGTGCTACCCCATTCACAGACATCAAG...AGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CCTTTTGCTCCTGGTGAGCACAGTGATAACCTTATCCAACCCCCTTTCAAGGCTGTTTCTTTCAGGCACTaGTTTCTAGCTTTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: PFAPGEHSDNLIQPPFKAVSFRH*FLAFEG
Trigger: ACCCTCAAAAGCTAGAAACCAGTGCCTGAAAGAAAC...AGCCTTGAAAGGGGGTTGGATAAGGTTATCACTGTGCTCACCAGGAGCAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGGCTCCCTTTCTTTTTaGAGTCTCCTCCATATGTGC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRGSLSF*SLLHMC
Trigger: GCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGGCTCCCAAACACTTTaGCTCCCTTTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRGSQTL*LPFFLE
Trigger: CTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTTCTGGGCCCGTCTCTaGCAGAACCCTTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIFWARL*QNPSFC
Trigger: GCAAAAGGAAGGGTTCTGCCAGAGACGGGCCCAGAA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
3UTR CAA 72 bp ACCTTATCCAACCCCCTTTCAAGGCTCCCAAACACTTaGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGT +
Preference number: 4 (lower is better)
Translates to: TLSNPLSRLPNT*APFLFGVSSIC
Trigger: ACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCTTGAAAGGGGGTTGGATAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp ATCATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATTAGAAAAAGAACCTaGGGGGCGGAGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: IIEVNKRILALPLNRIVVIRKRT*GAEGTA
Trigger: AGCCGTGCCCTCCGCCCCTCAGGTTCTTTTTCTAAT...TACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCCTCAATCTCCGTTTTaGTCCGGGGCAAATCACTCC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIPQSPF*SGANHS
Trigger: GGAGTGATTTGCCCCGGATCAAAACGGAGATTGAGG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCACAGCAGATACTATCTaGCGGAAGACAACCCGGGTC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLITADTI*RKTTRV
Trigger: GACCCGGGTTGTCTTCCGTCAGATAGTATCTGCTGT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CCTTTTGCTCCTGGTGAGCACAGTGATAACCTTATCCAACCCCCTTTCAAGGCTTGCCTGTTGTTTCTGTaGTGTACAGAAAGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: PFAPGEHSDNLIQPPFKACLLFL*CTESSV
Trigger: AACAGAACTTTCTGTACATCACAGAAACAACAGGCA...AGCCTTGAAAGGGGGTTGGATAAGGTTATCACTGTGCTCACCAGGAGCAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGATTCCACCCCATTTaGTTCTGTCCAGTACTTGGT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRRFHPI*FCPVLG
Trigger: ACCAAGTACTGGACAGAATCAAATGGGGTGGAATCT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGACCACATCGGGTTTTTaGAGCTGGCACACTTCTAAT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRTTSGF*SWHTSN
Trigger: ATTAGAAGTGTGCCAGCTTCAAAAACCCGATGTGGT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGATAACAGTATGCCCATaGTCCAAACATCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRITVCP*SKHLPL
Trigger: CAGAGGCAGATGTTTGGAGCATGGGCATACTGTTAT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAAACAGCAAATTTTCTaGCTTGAGGTCCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRKQQIF*LEVPVS
Trigger: GCTCACAGGGACCTCAAGCCAGAAAATTTGCTGTTT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGAAATCCGTTTCTTTaGGTCCACCTGCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRRNPFL*VHLQHL
Trigger: CAAATGCTGCAGGTGGACCCAAAGAAACGGATTTCT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCCTTGATGTCTGTGAATaGGGTAGCACTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QGWFNRFFIEIRFFGSTCLDVCE*GSTGLS
Trigger: GGACAAGCCAGTGCTACCCCATTCACAGACATCAAG...GCAGGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGAAGCTTTAGTCTTCTaGGCCCGTCTCTGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIEALVF*ARLWQN
Trigger: GTTCTGCCAGAGACGGGCCCAGAAGACTAAAGCTTC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACACTCATCCGGCAGGATaGAAGAATCCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: LQHLLKKQNATGREPLGNTHPAG*KNPSII
Trigger: TATAATTGATGGATTCTTCCATCCTGCCGGATGAGT...GTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTATGGCAGGCAAGTTTaGCCTTTGCAAAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIYGRQV*PLQSHL
Trigger: CAGGTGGCTTTGCAAAGGTCAAACTTGCCTGCCATA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5
CDS-3UTR TCA 90 bp CTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGAGTACTCAAGAACCATaGATATTTTGTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: LWVHLQHLLKKQNATGRESTQEP*IFCWLS
Trigger: AGACAGCCAACAAAATATTCATGGTTCTTGAGTACT...CTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATCCGGGTCTCCTCTTCTaGCAGGCGATCCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: NKRILALPLNRIVVILHDPGLLF*QAILGN
Trigger: ATTTCCCAGGATCGCCTGTCAGAAGAGGAGACCCGG...ATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGCAAATTTTCTGGCTTaGGGTCCCTGTGAGCATAGC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIANFLA*GPCEHS
Trigger: GCTATGCTCACAGGGACCTCAAGCCAGAAAATTTGC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp TTCCTTTTGCTCCTGGTGAGCACAGTGATAACCTTATCCAACCCCCTTTCAAGGAGTTGTAATCTTGCATaGTCCAGGGATGGTTCAATA +
Preference number: 4 (lower is better)
Translates to: FLLLLVSTVITLSNPLSRSCNLA*SRDGSI
Trigger: TATTGAACCATCCCTGGATCATGCAAGATTACAACT...CCTTGAAAGGGGGTTGGATAAGGTTATCACTGTGCTCACCAGGAGCAAAAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGTACTTGGTAAACTGTaGTGTTCGGGGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIVLGKL*CSGSSS
Trigger: GCTGCTACTCCCCGAACATCACAGTTTACCAAGTAC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCTGGTTTCTAGCTTTTaGGGGTGTAGTGTAACGATT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRLVSSF*GCSVTI
Trigger: AATCGTTACACTACACCCTCAAAAGCTAGAAACCAG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCACTTTCCCAAAATCTaGCTGTGTTTGACACTTCAG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRHFPKI*LCLTLQ
Trigger: CTGAAGTGTCAAACACAGTCAGATTTTGGGAAAGTG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCCTCAATCTCCGTTTTaGTCCGGGGCAAATCACTCT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIPQSPF*SGANHS
Trigger: AGAGTGATTTGCCCCGGATCAAAACGGAGATTGAGG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536987.5
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp ATCCAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCCCTCAATCTCCGTTTTaGTCCGGGGCAAATCACTCT +
Preference number: 4 (lower is better)
Translates to: IQGWFNRFFIEIRFFGSTPQSPF*SGANHS
Trigger: AGAGTGATTTGCCCCGGATCAAAACGGAGATTGAGG...GGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGTTACCCTTGGGTTTTaGACAGAGACCAAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRVTLGF*TETKVN
Trigger: ATTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAAC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp GCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACATTATTTGCAGGTGTTCTaGATAAGGCTGGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: AAFVEEAECYWERATWEHYLQVF*IRLELM
Trigger: CATTAACTCCAGCCTTATGCAGAACACCTGCAAATA...ATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGTCTCCTCCATATGTaGTTGGTTGAGATCCAATTC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSLLHM*LVEIQF
Trigger: GAATTGGATCTCAACCAAGCACATATGGAGGAGACT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTCTCCAGTAAGGATATaGCAGGCAAGTTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSPVRI*QASLTF
Trigger: AAAGGTCAAACTTGCCTGCCATATCCTTACTGGAGA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAATCCTTGTTACCCTTaGGTTTTGCACAGAGACCAA +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRNPCYP*VLHRDQ
Trigger: TTGGTCTCTGTGCAAAACCCAAGGGTAACAAGGATT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAA +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIEAECY*ERATWE
Trigger: TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATCCAGGGATGGTTAGAAATCCGTTTCTTTaGGTCCACCTGCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: LALPLNRIVVILHDPGMVRNPFL*VHLQHL
Trigger: CAAATGCTGCAGGTGGACCCAAAGAAACGGATTTCT...AACCATCCCTGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTTCCCCGAGCCTTCTTaGCTAGAAGCAGAAGATAGG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIFPEPS*LEAEDR
Trigger: CCTATCTTCTGCTTCTAGCCAAGAAGGCTCGGGGAA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCTTGATGTCTGTGAATaGGGTAGCACTGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLILDVCE*GSTGLS
Trigger: GGACAAGCCAGTGCTACCCCATTCACAGACATCAAG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGTTTCTTTCAGGCACTaGTTTCTAGCTTTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRVSFRH*FLAFEG
Trigger: ACCCTCAAAAGCTAGAAACCAGTGCCTGAAAGAAAC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTCCTCCATATGTGCTTaGTTGAGATCCAATTCCACT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSSICA*LRSNST
Trigger: AGTGGAATTGGATCTCAACCAAGCACATATGGAGGA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTAACTCATCCGGCAGGATaGAAGAATCCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: HPHSSGRMEESINYTLQLTHPAG*KNPSII
Trigger: TATAATTGATGGATTCTTCCATCCTGCCGGATGAGT...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGTTGTAATCTTGCATaGTCCAGGGATGGTTCAATA +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSCNLA*SRDGSI
Trigger: TATTGAACCATCCCTGGATCATGCAAGATTACAACT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTGCCTGTTGTTTCTGTaGTGTACAGAAAGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRCLLFL*CTESSV
Trigger: AACAGAACTTTCTGTACATCACAGAAACAACAGGCA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCAGACTCCAATTATTTaGCTTGATGTCTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRQTPII*LDVCEW
Trigger: CCATTCACAGACATCAAGTCAAATAATTGGAGTCTG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATCCAGGGCTGGTTTCTAGCTTTTaGGGGTGTAGTGTAACGATT +
Preference number: 4 (lower is better)
Translates to: RILALPLNRIVVILHDPGLVSSF*GCSVTI
Trigger: AATCGTTACACTACACCCTCAAAAGCTAGAAACCAG...CCCTGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCCATATGTGCTTGGTTaGGATCCAATTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIPYVLG*DPIPLS
Trigger: GCTCAGTGGAATTGGATCTCAACCAAGCACATATGG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGATCCAATTCCACTCACTTTCCCAAAATCTaGCTGTGTTTGACACTTCAG +
Preference number: 4 (lower is better)
Translates to: PFLFGVSSICAWLRSNSTHFPKI*LCLTLQ
Trigger: CTGAAGTGTCAAACACAGTCAGATTTTGGGAAAGTG...AGTGGAATTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGGCAAGTTTGACCTTTaGAAAGCCACCTGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIGKFDL*KATCPN
Trigger: ATTGGGACAGGTGGCTTTGCAAAGGTCAAACTTGCC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5
CDS-3UTR GCA 90 bp AAATCCGTTTCTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACGTTACCCTTGGGTTTTaGACAGAGACCAAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: KSVSLGPPAAFVEEAECYVTLGF*TETKVN
Trigger: ATTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAAC...GTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAGAAACGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAAATCCAAGATATGATTTaGCTTGTATTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: PAAFVEEAECYWERATWEIQDMI*LVLTQV
Trigger: CACCTGAGTTAATACAAGGCAAATCATATCTTGGAT...TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTATTTGCAGGTGTTCTaGATAAGGCTGGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRYLQVF*IRLELM
Trigger: CATTAACTCCAGCCTTATGCAGAACACCTGCAAATA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp GGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCAGCATAACAGTATGCCCATaGTCCAAACATCTGCAGTCC +
Preference number: 4 (lower is better)
Translates to: GWFNRFFIEIRFFGSTCSITVCP*SKHLQS
Trigger: GGACTGCAGATGTTTGGAGCATGGGCATACTGTTAT...GCTGCAGGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000625974.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AAATCCGTTTCTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACAATCCTTGTTACCCTTaGGTTTTGCACAGAGACCAA +
Preference number: 4 (lower is better)
Translates to: KSVSLGPPAAFVEEAECYNPCYP*VLHRDQ
Trigger: TTGGTCTCTGTGCAAAACCCAAGGGTAACAAGGATT...GTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAGAAACGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCAGAAATCCGTTTCTTTaGGTCCACCTGCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: QGWFNRFFIEIRFFGSTCRNPFL*VHLQHL
Trigger: CAAATGCTGCAGGTGGACCCAAAGAAACGGATTTCT...GCAGGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp TCCGTTTCTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGTGTAGTGTAACGATTTaGCGTAGTGAGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SVSLGPPAAFVEEAECYWCSVTI*RSEYFS
Trigger: AGAGAAATACTCACTACGCCAAATCGTTACACTACA...CCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAGAAACGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGGCTCCCTTTCTTTTTaGAGTCTCCTCCATATGTGC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIGSLSF*SLLHMC
Trigger: GCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGGCTCCCAAACACTTTaGCTCCCTTTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIGSQTL*LPFFLE
Trigger: CTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGACTCATCCGGCAGGATaGAAGAATCCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRTHPAG*KNPSII
Trigger: TATAATTGATGGATTCTTCCATCCTGCCGGATGAGT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGTACTCAAGAACCATaGATATTTTGTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSTQEP*IFCWLS
Trigger: AGACAGCCAACAAAATATTCATGGTTCTTGAGTACT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298048.7
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGATTCCACCCCATTTaGTTCTGTCCAGTACTTGGT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIRFHPI*FCPVLG
Trigger: ACCAAGTACTGGACAGAATCAAATGGGGTGGAATCT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp ATCATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTACCATATGTGCTTGGTTaGGATCCAATTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: IIEVNKRILALPLNRIVVPYVLG*DPIPLS
Trigger: GCTCAGTGGAATTGGATCTCAACCAAGCACATATGG...TACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp ATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCCCATATGTGCTTGGTTaGGATCCAATTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: IEVNKRILALPLNRIVVIPYVLG*DPIPLS
Trigger: GCTCAGTGGAATTGGATCTCAACCAAGCACATATGG...GATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCACCACATCGGGTTTTTaGAGCTGGCACACTTCTAAT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLITTSGF*SWHTSN
Trigger: ATTAGAAGTGTGCCAGCTTCAAAAACCCGATGTGGT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCATAACAGTATGCCCATaGTCCAAACATCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIITVCP*SKHLPL
Trigger: CAGAGGCAGATGTTTGGAGCATGGGCATACTGTTAT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
CDS-3UTR GCA 90 bp CTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATCCAGGGATGGTTGAACATATAACAGTATaGCCATGCTCCAAACATCTG +
Preference number: 4 (lower is better)
Translates to: LALPLNRIVVILHDPGMVEHITV*PCSKHL
Trigger: CAGATGTTTGGAGCATGGGCATACTGTTATATGTTC...AACCATCCCTGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625974.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AGAAAGAAGAAAGCCTTAAACGAACTGGTTTTCCCCGAGCCTTCTTGGCTAGAAGAACATATAACAGTATaGCCATGCTCCAAACATCTG +
Preference number: 4 (lower is better)
Translates to: RKKKALNELVFPEPSWLEEHITV*PCSKHL
Trigger: CAGATGTTTGGAGCATGGGCATACTGTTATATGTTC...TTCTAGCCAAGAAGGCTCGGGGAAAACCAGTTCGTTTAAGGCTTTCTTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR GCA 90 bp TTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGATCCAATATTTGCAGGTGTTCTaGATAAGGCTGGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: FGSLSFWSLLHMCLVEIQYLQVF*IRLELM
Trigger: CATTAACTCCAGCCTTATGCAGAACACCTGCAAATA...TTGGATCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AACACTTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGAGAACATATAACAGTATaGCCATGCTCCAAACATCTC +
Preference number: 4 (lower is better)
Translates to: NTLAPFLFGVSSICAWLREHITV*PCSKHL
Trigger: GAGATGTTTGGAGCATGGGCATACTGTTATATGTTC...TCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626154.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAAACAGCAAATTTTCTaGCTTGAGGTCCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIKQQIF*LEVPVS
Trigger: GCTCACAGGGACCTCAAGCCAGAAAATTTGCTGTTT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCAATCCTTGTTACCCTTaGGTTTTGCACAGAGACCAA +
Preference number: 4 (lower is better)
Translates to: QGWFNRFFIEIRFFGSTCNPCYP*VLHRDQ
Trigger: TTGGTCTCTGTGCAAAACCCAAGGGTAACAAGGATT...GCAGGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGAAATCCGTTTCTTTaGGTCCACCTGCAGCATTTG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIRNPFL*VHLQHL
Trigger: CAAATGCTGCAGGTGGACCCAAAGAAACGGATTTCT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTGTAGTGTAACGATTTaGCGTAGTGAGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRCSVTI*RSEYFS
Trigger: AGAGAAATACTCACTACGCCAAATCGTTACACTACA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGGGCTCCCAAACACTTTaGCTCCCTTTCTTTTTGGAG +
Preference number: 4 (lower is better)
Translates to: EVNKRILALPLNRIVVILGSQTL*LPFFLE
Trigger: CTCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCC...CAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAATCTGACTGTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAAGAAGCTTTAGTCTTCTaGGCCCGTCTCTGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QNLTVFDTSVYNPFVQSQEALVF*ARLWQN
Trigger: GTTCTGCCAGAGACGGGCCCAGAAGACTAAAGCTTC...TTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACACAGTCAGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CATCTTCACACCAATCATAGTCTATTAATCCCGCCACATAATTTTTATCACTTGGCAAATTTTCTGGCTTaGGGTCCCTGTGAGCATAGC +
Preference number: 4 (lower is better)
Translates to: HLHTNHSLLIPPHNFYHLANFLA*GPCEHS
Trigger: GCTATGCTCACAGGGACCTCAAGCCAGAAAATTTGC...CAAGTGATAAAAATTATGTGGCGGGATTAATAGACTATGATTGGTGTGAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp GTTCCTGTTGAATTTACTGGTATTTTAATTGGAGTTTCTTTCAGGCACTGGTTTGTACTTGGTAAACTGTaGTGTTCGGGGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: VPVEFTGILIGVSFRHWFVLGKL*CSGSSS
Trigger: GCTGCTACTCCCCGAACATCACAGTTTACCAAGTAC...AAACCAGTGCCTGAAAGAAACTCCAATTAAAATACCAGTAAATTCAACAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCTGGTTTCTAGCTTTTaGGGGTGTAGTGTAACGATT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLILVSSF*GCSVTI
Trigger: AATCGTTACACTACACCCTCAAAAGCTAGAAACCAG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCACTTTCCCAAAATCTaGCTGTGTTTGACACTTCAG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIHFPKI*LCLTLQ
Trigger: CTGAAGTGTCAAACACAGTCAGATTTTGGGAAAGTG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp GTTGAATTTACTGGTATTTTAATTGGAGTTTCTTTCAGGCACTGGTTTCTAGCTCCTCAATCTCCGTTTTaGTCCGGGGCAAATCACTCT +
Preference number: 4 (lower is better)
Translates to: VEFTGILIGVSFRHWFLAPQSPF*SGANHS
Trigger: AGAGTGATTTGCCCCGGATCAAAACGGAGATTGAGG...AGCTAGAAACCAGTGCCTGAAAGAAACTCCAATTAAAATACCAGTAAATTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGTTACCCTTGGGTTTTaGACAGAGACCAAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIVTLGF*TETKVN
Trigger: ATTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAAC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGATCCAAGATATGATTTaGCTTGTATTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRIQDMI*LVLTQV
Trigger: CACCTGAGTTAATACAAGGCAAATCATATCTTGGAT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGTCTCCTCCATATGTaGTTGGTTGAGATCCAATTC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLISLLHM*LVEIQF
Trigger: GAATTGGATCTCAACCAAGCACATATGGAGGAGACT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTGTACAAAGTCAACATaGTTCTTTGGAAGAATAGAC +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRCTKST*FFGRID
Trigger: GTCTATTCTTCCAAAGAAGCATGTTGACTTTGTACA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAATCCTTGTTACCCTTaGGTTTTGCACAGAGACCAA +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLINPCYP*VLHRDQ
Trigger: TTGGTCTCTGTGCAAAACCCAAGGGTAACAAGGATT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTGCATGATCCAGGGATaGTTCAATAGATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRCMIQG*FNRFFI
Trigger: TATGAAAAATCTATTGAACCATCCCTGGATCATGCA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GTTCCTGTTGAATTTACTGGTATTTTAATTGGAGTTTCTTTCAGGCACTGGTTTTTCCCCGAGCCTTCTTaGCTAGAAGCAGAAGATAGG +
Preference number: 4 (lower is better)
Translates to: VPVEFTGILIGVSFRHWFFPEPS*LEAEDR
Trigger: CCTATCTTCTGCTTCTAGCCAAGAAGGCTCGGGGAA...AAACCAGTGCCTGAAAGAAACTCCAATTAAAATACCAGTAAATTCAACAGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGATTAACTGGAGTCTTTaGCTCAGGAAACATAAAGTA +
Preference number: 4 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRINWSL*LRKHKV
Trigger: TACTTTATGTTTCCTGAGCCAAAGACTCCAGTTAAT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGTTTCTTTCAGGCACTaGTTTCTAGCTTTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIVSFRH*FLAFEG
Trigger: ACCCTCAAAAGCTAGAAACCAGTGCCTGAAAGAAAC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTCCTCCATATGTGCTTaGTTGAGATCCAATTCCACT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLISSICA*LRSNST
Trigger: AGTGGAATTGGATCTCAACCAAGCACATATGGAGGA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GGTGTTCTGCATAAGGCTGGAGTTAATGATTTAGATTCCACCCCATTTGATTCTTCCTCCATATGTGCTTaGTTGAGATCCAATTCCACT +
Preference number: 4 (lower is better)
Translates to: GVLHKAGVNDLDSTPFDSSSICA*LRSNST
Trigger: AGTGGAATTGGATCTCAACCAAGCACATATGGAGGA...AGAATCAAATGGGGTGGAATCTAAATCATTAACTCCAGCCTTATGCAGAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGTTGTAATCTTGCATaGTCCAGGGATGGTTCAATA +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLISCNLA*SRDGSI
Trigger: TATTGAACCATCCCTGGATCATGCAAGATTACAACT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTGCCTGTTGTTTCTGTaGTGTACAGAAAGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLICLLFL*CTESSV
Trigger: AACAGAACTTTCTGTACATCACAGAAACAACAGGCA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCAGACTCCAATTATTTaGCTTGATGTCTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIQTPII*LDVCEW
Trigger: CCATTCACAGACATCAAGTCAAATAATTGGAGTCTG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTACCCTCAAGAACCATaGATATTTTGTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIYPQEP*IFCWLS
Trigger: AGACAGCCAACAAAATATTCATGGTTCTTGAGGGTA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545008.5
CDS-3UTR GCA 90 bp GAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGGTTACCCTTGGGTTTTaGACAGAGACCAAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: EVNKRILALPLNRIVVILVTLGF*TETKVN
Trigger: ATTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAAC...CAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AGAAAGAAGAAAGCCTTAAACGAACTGGTTTTCCCCGAGCCTTCTTGGCTAGAAATCCAAGATATGATTTaGCTTGTATTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RKKKALNELVFPEPSWLEIQDMI*LVLTQV
Trigger: CACCTGAGTTAATACAAGGCAAATCATATCTTGGAT...TTCTAGCCAAGAAGGCTCGGGGAAAACCAGTTCGTTTAAGGCTTTCTTCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGAACATATAACAGTATaGCCATGCTCCAAACATCTG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIEHITV*PCSKHL
Trigger: CAGATGTTTGGAGCATGGGCATACTGTTATATGTTC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTATTTGCAGGTGTTCTaGATAAGGCTGGAGTTAATG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIYLQVF*IRLELM
Trigger: CATTAACTCCAGCCTTATGCAGAACACCTGCAAATA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AACACTTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGATGTACAAAGTCAACATaGTTCTTTGGAAGAATAGAC +
Preference number: 4 (lower is better)
Translates to: NTLAPFLFGVSSICAWLRCTKST*FFGRID
Trigger: GTCTATTCTTCCAAAGAAGCATGTTGACTTTGTACA...TCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATAAACAGCAAATTTTCTaGCTTGAGGTCCCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VNKRILALPLNRIVVILHKQQIF*LEVPVS
Trigger: GCTCACAGGGACCTCAAGCCAGAAAATTTGCTGTTT...ATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CATCTTCACACCAATCATAGTCTATTAATCCCGCCACATAATTTTTATCACTTGGGCTCCCTTTCTTTTTaGAGTCTCCTCCATATGTGC +
Preference number: 4 (lower is better)
Translates to: HLHTNHSLLIPPHNFYHLGSLSF*SLLHMC
Trigger: GCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCC...CAAGTGATAAAAATTATGTGGCGGGATTAATAGACTATGATTGGTGTGAAGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCACTCATCCGGCAGGATaGAAGAATCCATCAATTATA +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLITHPAG*KNPSII
Trigger: TATAATTGATGGATTCTTCCATCCTGCCGGATGAGT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
3UTR CAA 72 bp CACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTaGTCTGTTCCTGTTGAATTTACTGGTATTTTAATT +
Preference number: 4 (lower is better)
Translates to: HRLSGLMTPVIN*SVPVEFTGILI
Trigger: AATTAAAATACCAGTAAATTCAACAGGAACAGACAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGTACTCAAGAACCATaGATATTTTGTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLISTQEP*IFCWLS
Trigger: AGACAGCCAACAAAATATTCATGGTTCTTGAGTACT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000298048.7
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CATCGGGTTTTTGAAGCTGGCACACTTCTAATTCAAATTGCATTGTCACTTTCCAGTACTCAAGAACCATaGATATTTTGTTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HRVFEAGTLLIQIALSLSSTQEP*IFCWLS
Trigger: AGACAGCCAACAAAATATTCATGGTTCTTGAGTACT...GGAAAGTGACAATGCAATTTGAATTAGAAGTGTGCCAGCTTCAAAAACCCGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp ATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCAGTTGTAATCTTGCATaGTCCAGGGATGGTTCAATA +
Preference number: 4 (lower is better)
Translates to: IEVNKRILALPLNRIVVISCNLA*SRDGSI
Trigger: TATTGAACCATCCCTGGATCATGCAAGATTACAACT...GATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATAGATTCCACCCCATTTaGTTCTGTCCAGTACTTGGT +
Preference number: 4 (lower is better)
Translates to: NKRILALPLNRIVVILHDRFHPI*FCPVLG
Trigger: ACCAAGTACTGGACAGAATCAAATGGGGTGGAATCT...ATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp AATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATACCACATCGGGTTTTTaGAGCTGGCACACTTCTAAT +
Preference number: 4 (lower is better)
Translates to: NKRILALPLNRIVVILHDTTSGF*SWHTSN
Trigger: ATTAGAAGTGTGCCAGCTTCAAAAACCCGATGTGGT...ATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp CAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCATCCAAGATATGATTTaGCTTGTATTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QGWFNRFFIEIRFFGSTCIQDMI*LVLTQV
Trigger: CACCTGAGTTAATACAAGGCAAATCATATCTTGGAT...GCAGGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp TTTGGCGTAGTGAGTATTTCTCTCTTATGCTGGTTCTTATTAACTGGAGTCTTTAGTCTCCTCCATATGTaGTTGGTTGAGATCCAATTC +
Preference number: 4 (lower is better)
Translates to: FGVVSISLLCWFLLTGVFSLLHM*LVEIQF
Trigger: GAATTGGATCTCAACCAAGCACATATGGAGGAGACT...AAAGACTCCAGTTAATAAGAACCAGCATAAGAGAGAAATACTCACTACGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTGTAGTGTAACGATTTaGCGTAGTGAGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLICSVTI*RSEYFS
Trigger: AGAGAAATACTCACTACGCCAAATCGTTACACTACA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
3UTR CAA 72 bp GGTGATCATACTGCCACAGTGAAATTAAATCCTCCATaGTTTGCCTGTTGTTTCTGTGATGTACAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: GDHTATVKLNPP*FACCFCDVQKV
Trigger: AACTTTCTGTACATCACAGAAACAACAGGCAAACAATGGAGGATTTAATTTCACTGTGGCAGTATGATCACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCATCCAAGATATGATTTaGCTTGTATTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIIQDMI*LVLTQV
Trigger: CACCTGAGTTAATACAAGGCAAATCATATCTTGGAT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp GTTGAATTTACTGGTATTTTAATTGGAGTTTCTTTCAGGCACTGGTTTCTAGCTAGTCTCCTCCATATGTaGTTGGTTGAGATCCAATTC +
Preference number: 4 (lower is better)
Translates to: VEFTGILIGVSFRHWFLASLLHM*LVEIQF
Trigger: GAATTGGATCTCAACCAAGCACATATGGAGGAGACT...AGCTAGAAACCAGTGCCTGAAAGAAACTCCAATTAAAATACCAGTAAATTCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTGTACAAAGTCAACATaGTTCTTTGGAAGAATAGAC +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLICTKST*FFGRID
Trigger: GTCTATTCTTCCAAAGAAGCATGTTGACTTTGTACA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATAATCCTTGTTACCCTTaGGTTTTGCACAGAGACCAA +
Preference number: 4 (lower is better)
Translates to: NKRILALPLNRIVVILHDNPCYP*VLHRDQ
Trigger: TTGGTCTCTGTGCAAAACCCAAGGGTAACAAGGATT...ATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTGCATGATCCAGGGATaGTTCAATAGATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLICMIQG*FNRFFI
Trigger: TATGAAAAATCTATTGAACCATCCCTGGATCATGCA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp ATCCAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCATGATCCAGGGATaGTTCAATAGATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: IQGWFNRFFIEIRFFGSTCMIQG*FNRFFI
Trigger: TATGAAAAATCTATTGAACCATCCCTGGATCATGCA...GGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GGTGTTCTGCATAAGGCTGGAGTTAATGATTTAGATTCCACCCCATTTGATTCTTGCATGATCCAGGGATaGTTCAATAGATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: GVLHKAGVNDLDSTPFDSCMIQG*FNRFFI
Trigger: TATGAAAAATCTATTGAACCATCCCTGGATCATGCA...AGAATCAAATGGGGTGGAATCTAAATCATTAACTCCAGCCTTATGCAGAACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCATTAACTGGAGTCTTTaGCTCAGGAAACATAAAGTA +
Preference number: 4 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIINWSL*LRKHKV
Trigger: TACTTTATGTTTCCTGAGCCAAAGACTCCAGTTAAT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CATCGGGTTTTTGAAGCTGGCACACTTCTAATTCAAATTGCATTGTCACTTTCCATTAACTGGAGTCTTTaGCTCAGGAAACATAAAGTA +
Preference number: 4 (lower is better)
Translates to: HRVFEAGTLLIQIALSLSINWSL*LRKHKV
Trigger: TACTTTATGTTTCCTGAGCCAAAGACTCCAGTTAAT...GGAAAGTGACAATGCAATTTGAATTAGAAGTGTGCCAGCTTCAAAAACCCGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp CAAAATCTGACTGTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAAGTTTCTTTCAGGCACTaGTTTCTAGCTTTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QNLTVFDTSVYNPFVQSQVSFRH*FLAFEG
Trigger: ACCCTCAAAAGCTAGAAACCAGTGCCTGAAAGAAAC...TTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACACAGTCAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
3UTR CAA 72 bp CATAGTCTATTAATCCCGCCACATAATTTTTATCACTaGCGGTCACATCTTCCAGACTCCAATTATTTGACT +
Preference number: 4 (lower is better)
Translates to: HSLLIPPHNFYH*RSHLPDSNYLT
Trigger: AGTCAAATAATTGGAGTCTGGAAGATGTGACCGCAAGTGATAAAAATTATGTGGCGGGATTAATAGACTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR TCA 90 bp CAAAATCTGACTGTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAAAGTTGTAATCTTGCATaGTCCAGGGATGGTTCAATA +
Preference number: 4 (lower is better)
Translates to: QNLTVFDTSVYNPFVQSQSCNLA*SRDGSI
Trigger: TATTGAACCATCCCTGGATCATGCAAGATTACAACT...TTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACACAGTCAGATTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR GCA 90 bp ATCATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTATGTACAAAGTCAACATaGTTCTTTGGAAGAATAGAC +
Preference number: 4 (lower is better)
Translates to: IIEVNKRILALPLNRIVVCTKST*FFGRID
Trigger: GTCTATTCTTCCAAAGAAGCATGTTGACTTTGTACA...TACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CCA 90 bp GTTTCTGTGATGTACAGAAAGTTCTGTTACGCAATCATCATCGAGGTGAATAAAATTAACTGGAGTCTTTaGCTCAGGAAACATAAAGTA +
Preference number: 4 (lower is better)
Translates to: VSVMYRKFCYAIIIEVNKINWSL*LRKHKV
Trigger: TACTTTATGTTTCCTGAGCCAAAGACTCCAGTTAAT...TTTATTCACCTCGATGATGATTGCGTAACAGAACTTTCTGTACATCACAGAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS TCA 90 bp CGGCGGGCAGGCGGGAGAACTGACCTGAGGGGCGGAGGGCACGGCTaGGCGGCGCCCGACAGAAGGACAGGGGCCTGCTGTCCTGAGAGA +
Preference number: 5 (lower is better)
Translates to: RRAGGRTDLRGGGHG*AAPDRRTGACCPER
Trigger: TCTCTCAGGACAGCAGGCCCCTGTCCTTCTGTCGGGCGCCGCTCAGCCGTGCCCTCCGCCCCTCAGGTCAGTTCTCCCGCCTGCCCGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487398.3
CDS TCA 90 bp CCAGCCATCAACTGCGACTGCGGCGGGCAGGCGGGAGAACTGACCTaGGGGGCGGAGGGCACGGCTGAGCGGCGCCCGACAGAAGGACAG +
Preference number: 5 (lower is better)
Translates to: PAINCDCGGQAGELT*GAEGTAERRPTEGQ
Trigger: CTGTCCTTCTGTCGGGCGCCGCTCAGCCGTGCCCTCCGCCCCTCAGGTCAGTTCTCCCGCCTGCCCGCCGCAGTCGCAGTTGATGGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487398.3
CDS TCA 90 bp AGACCCCAGCCATCAACTGCGACTGCGGCGGGCAGGCGGGAGAACTaGCCTGAGGGGCGGAGGGCACGGCTGAGCGGCGCCCGACAGAAG +
Preference number: 5 (lower is better)
Translates to: RPQPSTATAAGRREN*PEGRRARLSGARQK
Trigger: CTTCTGTCGGGCGCCGCTCAGCCGTGCCCTCCGCCCCTCAGGTCAGTTCTCCCGCCTGCCCGCCGCAGTCGCAGTTGATGGCTGGGGTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487398.3
CDS CCA 90 bp GCGCCCGACAGAAGGACAGGGGCCTGCTGTCCTGAGAGACGCGGCTaGTACGGCGTTCCTAAGAATCTTTTCGATCGCCGGGTTGTGGCC +
Preference number: 5 (lower is better)
Translates to: APDRRTGACCPERRG*YGVPKNLFDRRVVA
Trigger: GGCCACAACCCGGCGATCGAAAAGATTCTTAGGAACGCCGTACCAGCCGCGTCTCTCAGGACAGCAGGCCCCTGTCCTTCTGTCGGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000536329.5
ENST00000536860.5
ENST00000541717.4
ENST00000543751.5
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTTTTCGATCGCCGGGTaGTGGCCGCTTCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRFSIAG*WPLPPA
Trigger: GGCGGGCGGAAGCGGCCACAACCCGGCGATCGAAAA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536329.5
ENST00000536860.5
ENST00000541717.4
ENST00000543751.5
ENST00000627766.2
CDS-3UTR CAA 90 bp AACACTTTGGCTCCCTTTCTTTTTGGAGTCTCCTCCATATGTGCTTGGTTGAGATTTTCGATCGCCGGGTaGTGGCCGCTTCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: NTLAPFLFGVSSICAWLRFSIAG*WPLPPA
Trigger: GGCGGGCGGAAGCGGCCACAACCCGGCGATCGAAAA...TCTCAACCAAGCACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCAAAGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTTTTCGATCGCCGGGTaGTGGCCGCTTCCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIFSIAG*WPLPPA
Trigger: GGCGGGCGGAAGCGGCCACAACCCGGCGATCGAAAA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536329.5
ENST00000536860.5
ENST00000541717.4
ENST00000543751.5
ENST00000627766.2
CDS-3UTR CAA 90 bp GAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGTCTGTTCCTGTCCACCTGCAGCATTaGTTGAAGAAGCAGAATGCT +
Preference number: 5 (lower is better)
Translates to: ERHRLSGLMTPVINLSVPVHLQH*LKKQNA
Trigger: AGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGAC...AGGAACAGACAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS GCA 90 bp CGAGATCACGCCACTGTACTCCAGCCTCTGATCCAAGATATGATTTaGCTTGTATTAACTCAGGTGCTGCATAAGCCAGACTCCCACAGC +
Preference number: 5 (lower is better)
Translates to: RDHATVLQPLIQDMI*LVLTQVLHKPDSHS
Trigger: GCTGTGGGAGTCTGGCTTATGCAGCACCTGAGTTAATACAAGGCAAATCATATCTTGGATCAGAGGCTGGAGTACAGTGGCGTGATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625974.2
CDS-3UTR CAA 90 bp CACCCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTATGGGGTAGCACTGGCTaGTCCACAGGAGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: HPHSSGRMEESINYTLQLWGSTG*STGERR
Trigger: TCTTCTTTCTCCTGTGGACAAGCCAGTGCTACCCCA...TAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS TCA 90 bp AACAGCAGATACTATCTGACGGAAGACAACCCGGGTCTCCTCTTCTaGCAGGCGATCCTGGGAAATTATATAGTCAAACAGCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: NSRYYLTEDNPGLLF*QAILGNYIVKQLSS
Trigger: GGAGGAGAGCTGTTTGACTATATAATTTCCCAGGATCGCCTGTCAGAAGAGGAGACCCGGGTTGTCTTCCGTCAGATAGTATCTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000487398.3
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGCCTCAATCTCCGTTTaGATCCGGGGCAAATCACTC +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRASISV*IRGKSL
Trigger: GAGTGATTTGCCCCGGATCAAAACGGAGATTGAGGC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTGGGGTAGCACTGGCTaGTCCACAGGAGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRWGSTG*STGERR
Trigger: TCTTCTTTCTCCTGTGGACAAGCCAGTGCTACCCCA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGAGGCTCCCAAACACTTaGGCTCCCTTTCTTTTTGGA +
Preference number: 5 (lower is better)
Translates to: LWVHLQHLLKKQNATGRERLPNT*APFLFG
Trigger: TCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCT...CTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTACCATGAATATTTTGTaGGCTGTCTCTAGCACATGG +
Preference number: 5 (lower is better)
Translates to: GPPAAFVEEAECYWERATTMNIL*AVSSTW
Trigger: CCATGTGCTAGAGACAGCCAACAAAATATTCATGGT...AGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp TTCCTTTTGCTCCTGGTGAGCACAGTGATAACCTTATCCAACCCCCTTTCAAGGCTGGGAGAGAGCCACTaGGGAACATCATATTTTCCT +
Preference number: 5 (lower is better)
Translates to: FLLLLVSTVITLSNPLSRLGESH*GTSYFP
Trigger: AGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAG...CCTTGAAAGGGGGTTGGATAAGGTTATCACTGTGCTCACCAGGAGCAAAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACGATTCTGTCCAGTACTaGGTAAACTGTGATGTTCGG +
Preference number: 5 (lower is better)
Translates to: LQHLLKKQNATGREPLGNDSVQY*VNCDVR
Trigger: CCGAACATCACAGTTTACCAAGTACTGGACAGAATC...GTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp TTCCTTTTGCTCCTGGTGAGCACAGTGATAACCTTATCCAACCCCCTTTCAAGGTGGCTCCCTTTCTTTTaGGAGTCTCCTCCATATGTG +
Preference number: 5 (lower is better)
Translates to: FLLLLVSTVITLSNPLSRWLPFF*ESPPYV
Trigger: CACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCA...CCTTGAAAGGGGGTTGGATAAGGTTATCACTGTGCTCACCAGGAGCAAAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp TTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACATCATATTTGCCTCAATCTCCGTTTaGATCCGGGGCAAATCACTC +
Preference number: 5 (lower is better)
Translates to: LLKKQNATGREPLGNIIFASISV*IRGKSL
Trigger: GAGTGATTTGCCCCGGATCAAAACGGAGATTGAGGC...AAATATGATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCTGGGAGAGAGCCACTaGGGAACATCATATTTTCCT +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRLGESH*GTSYFP
Trigger: AGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGTCCACCTGCAGCATTaGTTGAAGAAGCAGAATGCT +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRVHLQH*LKKQNA
Trigger: AGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGAC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGAGGATAGTTGTAATCTaGCATGATCCAGGGATGGTT +
Preference number: 5 (lower is better)
Translates to: LWVHLQHLLKKQNATGRERIVVI*HDPGMV
Trigger: AACCATCCCTGGATCATGCAAGATTACAACTATCCT...CTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GAGCGGCACCGCCTCTCAGGGCTAATGACACCTGTCATTAACTTGTCTGTTCCTACACCTGTCATTAACTaGTCTGTTCCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: ERHRLSGLMTPVINLSVPTPVIN*SVPVEF
Trigger: AAATTCAACAGGAACAGACAAGTTAATGACAGGTGT...AGGAACAGACAAGTTAATGACAGGTGTCATTAGCCCTGAGAGGCGGTGCCGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCTCCTCCATATGTGCTaGGTTGAGATCCAATTCCAC +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRLLHMC*VEIQFH
Trigger: GTGGAATTGGATCTCAACCAAGCACATATGGAGGAG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CCACACTCATCCGGCAGGATGGAAGAATCCATCAATTATACCTTGCAGCTAGATCTCCTCCATATGTGCTaGGTTGAGATCCAATTCCAC +
Preference number: 5 (lower is better)
Translates to: PHSSGRMEESINYTLQLDLLHMC*VEIQFH
Trigger: GTGGAATTGGATCTCAACCAAGCACATATGGAGGAG...ATCTAGCTGCAAGGTATAATTGATGGATTCTTCCATCCTGCCGGATGAGTGTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTGGCTCCCTTTCTTTTaGGAGTCTCCTCCATATGTG +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRWLPFF*ESPPYV
Trigger: CACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGGCTCCCAAACACTTaGGCTCCCTTTCTTTTTGGA +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRRLPNT*APFLFG
Trigger: TCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGCCTCAATCTCCGTTTaGATCCGGGGCAAATCACTC +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIASISV*IRGKSL
Trigger: GAGTGATTTGCCCCGGATCAAAACGGAGATTGAGGC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp ATCCAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCGCCTCAATCTCCGTTTaGATCCGGGGCAAATCACTC +
Preference number: 5 (lower is better)
Translates to: IQGWFNRFFIEIRFFGSTASISV*IRGKSL
Trigger: GAGTGATTTGCCCCGGATCAAAACGGAGATTGAGGC...GGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTGTTACCCTTGGGTTTaGCACAGAGACCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRCYPWV*HRDQSQ
Trigger: TTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAACA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTGGGGTAGCACTGGCTaGTCCACAGGAGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIWGSTG*STGERR
Trigger: TCTTCTTTCTCCTGTGGACAAGCCAGTGCTACCCCA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCTCCAATTATTTGACTaGATGTCTGTGAATGGGGTA +
Preference number: 5 (lower is better)
Translates to: LWVHLQHLLKKQNATGRELQLFD*MSVNGV
Trigger: TACCCCATTCACAGACATCAAGTCAAATAATTGGAG...CTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGATTCTGTCCAGTACTaGGTAAACTGTGATGTTCGG +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRDSVQY*VNCDVR
Trigger: CCGAACATCACAGTTTACCAAGTACTGGACAGAATC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTCCATATGTGCTTGGTaGAGATCCAATTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSICAW*RSNSTE
Trigger: CTCAGTGGAATTGGATCTCAACCAAGCACATATGGA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAATCCATCAATTATACCTaGCAGCTAGATAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: PAAFVEEAECYWERATWESINYT*QLDRMS
Trigger: AGACATCCTATCTAGCTGCAAGGTATAATTGATGGA...TTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS CCA 90 bp TCTTTGGGTCCACCTGCAGCATTTGTTGAAGAAGCAGAATGCTACTaGGAGAGAGCCACTTGGGAACATCATATTTTCCTCTCTACAAAA +
Preference number: 5 (lower is better)
Translates to: SLGPPAAFVEEAECY*ERATWEHHIFLSTK
Trigger: TTTTGTAGAGAGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGACCCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480021.1
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGACCATGAATATTTTGTaGGCTGTCTCTAGCACATGG +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRTMNIL*AVSSTW
Trigger: CCATGTGCTAGAGACAGCCAACAAAATATTCATGGT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATCCAGGGATGGTTTGTTACCCTTGGGTTTaGCACAGAGACCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: LALPLNRIVVILHDPGMVCYPWV*HRDQSQ
Trigger: TTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAACA...AACCATCCCTGGATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCAGCCTGGGAGAGAGCCACTaGGGAACATCATATTTTCCT +
Preference number: 5 (lower is better)
Translates to: GWFNRFFIEIRFFGSTCSLGESH*GTSYFP
Trigger: AGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAG...GCTGCAGGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAGGATAGTTGTAATCTaGCATGATCCAGGGATGGTT +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRRIVVI*HDPGMV
Trigger: AACCATCCCTGGATCATGCAAGATTACAACTATCCT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GTCCAGTACTTGGTAAACTGTGATGTTCGGGGAGTAGCAGCACCTGTTGATAAAAGGATAGTTGTAATCTaGCATGATCCAGGGATGGTT +
Preference number: 5 (lower is better)
Translates to: VQYLVNCDVRGVAAPVDKRIVVI*HDPGMV
Trigger: AACCATCCCTGGATCATGCAAGATTACAACTATCCT...TTTATCAACAGGTGCTGCTACTCCCCGAACATCACAGTTTACCAAGTACTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAGCATTTGTTGAAGAAGCAGAATGCTACTGGGAGAGAGCCACTTGGGAACATCAAAAGGATTCTTGCTTaGCCACTCAACAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: QHLLKKQNATGREPLGNIKRILA*PLNRIV
Trigger: AACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTT...GATGTTCCCAAGTGGCTCTCTCCCAGTAGCATTCTGCTTCTTCAACAAATGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCTGGCTCCCTTTCTTTTaGGAGTCTCCTCCATATGTG +
Preference number: 5 (lower is better)
Translates to: QGWFNRFFIEIRFFGSTCWLPFF*ESPPYV
Trigger: CACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCA...GCAGGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CCTTTTGCTCCTGGTGAGCACAGTGATAACCTTATCCAACCCCCTTTCAAGGCTCAGTGTATAACCCTTTaGTACAAAGTCAACATGCTT +
Preference number: 5 (lower is better)
Translates to: PFAPGEHSDNLIQPPFKAQCITL*YKVNML
Trigger: AAGCATGTTGACTTTGTACAAAAGGGTTATACACTG...AGCCTTGAAAGGGGGTTGGATAAGGTTATCACTGTGCTCACCAGGAGCAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCAGTACTTGGTAAACTaGATGTCTGTGAATGGGGTA +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRQYLVN*MSVNGV
Trigger: TACCCCATTCACAGACATCAAGTTTACCAAGTACTG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541717.4
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGATTCTGTCCAGTACTaGGTAAACTTGATGTCTGTG +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRDSVQY*VNLMSV
Trigger: CACAGACATCAAGTTTACCAAGTACTGGACAGAATC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541717.4
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCATATGGCAGGCAAGTTaGACCTTTGCAAAGCCACCT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIIWQAS*TFAKPP
Trigger: AGGTGGCTTTGCAAAGGTCAAACTTGCCTGCCATAT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCTGGGAGAGAGCCACTaGGGAACATCATATTTTCCT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLILGESH*GTSYFP
Trigger: AGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGTCCACCTGCAGCATTaGTTGAAGAAGCAGAATGCT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIVHLQH*LKKQNA
Trigger: AGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGAC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGAAAAGGATTCTTGCTTaGCCACTCAACAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRKRILA*PLNRIV
Trigger: AACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GTCCAGTACTTGGTAAACTGTGATGTTCGGGGAGTAGCAGCACCTGTTGATAAAAAAAGGATTCTTGCTTaGCCACTCAACAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: VQYLVNCDVRGVAAPVDKKRILA*PLNRIV
Trigger: AACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTT...TTTATCAACAGGTGCTGCTACTCCCCGAACATCACAGTTTACCAAGTACTGGAC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GTTTCTGTGATGTACAGAAAGTTCTGTTACGCAATCATCATCGAGGTGAATAAATGGGGTAGCACTGGCTaGTCCACAGGAGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: VSVMYRKFCYAIIIEVNKWGSTG*STGERR
Trigger: TCTTCTTTCTCCTGTGGACAAGCCAGTGCTACCCCA...TTTATTCACCTCGATGATGATTGCGTAACAGAACTTTCTGTACATCACAGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCTCCAATTATTTGACTaGATGTCTGTGAATGGGGTA +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRLQLFD*MSVNGV
Trigger: TACCCCATTCACAGACATCAAGTCAAATAATTGGAG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GTCCAGTACTTGGTAAACTGTGATGTTCGGGGAGTAGCAGCACCTGTTGATAAACTCCAATTATTTGACTaGATGTCTGTGAATGGGGTA +
Preference number: 5 (lower is better)
Translates to: VQYLVNCDVRGVAAPVDKLQLFD*MSVNGV
Trigger: TACCCCATTCACAGACATCAAGTCAAATAATTGGAG...TTTATCAACAGGTGCTGCTACTCCCCGAACATCACAGTTTACCAAGTACTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCTGCGATTCTGTCCAGTACTaGGTAAACTGTGATGTTCGG +
Preference number: 5 (lower is better)
Translates to: QGWFNRFFIEIRFFGSTCDSVQY*VNCDVR
Trigger: CCGAACATCACAGTTTACCAAGTACTGGACAGAATC...GCAGGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCTCCTCCATATGTGCTaGGTTGAGATCCAATTCCAC +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLILLHMC*VEIQFH
Trigger: GTGGAATTGGATCTCAACCAAGCACATATGGAGGAG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTGGCTCCCTTTCTTTTaGGAGTCTCCTCCATATGTG +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIWLPFF*ESPPYV
Trigger: CACATATGGAGGAGACTCCAAAAAGAAAGGGAGCCA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGGCTCCCAAACACTTaGGCTCCCTTTCTTTTTGGA +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIRLPNT*APFLFG
Trigger: TCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGTCCATCAATTATACCTaGCAGCTAGATAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRSINYT*QLDRMS
Trigger: AGACATCCTATCTAGCTGCAAGGTATAATTGATGGA...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTGTTACCCTTGGGTTTaGCACAGAGACCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLICYPWV*HRDQSQ
Trigger: TTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAACA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CATCGGGTTTTTGAAGCTGGCACACTTCTAATTCAAATTGCATTGTCACTTTCCTGTTACCCTTGGGTTTaGCACAGAGACCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: HRVFEAGTLLIQIALSLSCYPWV*HRDQSQ
Trigger: TTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAACA...GGAAAGTGACAATGCAATTTGAATTAGAAGTGTGCCAGCTTCAAAAACCCGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGGATCCAAGATATGATTaGCCTTGTATTAACTCAGGT +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRDPRYD*PCINSG
Trigger: ACCTGAGTTAATACAAGGCAAATCATATCTTGGATC...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp ATCATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAGTCCACCTGCAGCATTaGTTGAAGAAGCAGAATGCT +
Preference number: 5 (lower is better)
Translates to: IIEVNKRILALPLNRIVVVHLQH*LKKQNA
Trigger: AGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGAC...TACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGATTCTGTCCAGTACTaGGTAAACTGTGATGTTCGG +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIDSVQY*VNCDVR
Trigger: CCGAACATCACAGTTTACCAAGTACTGGACAGAATC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGACACCTGTCATTAACTaGTCTGTTCCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRTPVIN*SVPVEF
Trigger: AAATTCAACAGGAACAGACAAGTTAATGACAGGTGT...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTCCATATGTGCTTGGTaGAGATCCAATTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLISICAW*RSNSTE
Trigger: CTCAGTGGAATTGGATCTCAACCAAGCACATATGGA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCTCCTCCATATGTGCTaGGTTGAGATCCAATTCCAC +
Preference number: 5 (lower is better)
Translates to: EVNKRILALPLNRIVVILLLHMC*VEIQFH
Trigger: GTGGAATTGGATCTCAACCAAGCACATATGGAGGAG...CAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCGGCAGTGTATAACCCTTTaGTACAAAGTCAACATGCTT +
Preference number: 5 (lower is better)
Translates to: QSDHNSLYVGCITPTLIRQCITL*YKVNML
Trigger: AAGCATGTTGACTTTGTACAAAAGGGTTATACACTG...CCGGATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GAGAAAGAAGAAAGCCTTAAACGAACTGGTTTTCCCCGAGCCTTCTTGGCTAGACAGTGTATAACCCTTTaGTACAAAGTCAACATGCTT +
Preference number: 5 (lower is better)
Translates to: EKEESLKRTGFPRAFLARQCITL*YKVNML
Trigger: AAGCATGTTGACTTTGTACAAAAGGGTTATACACTG...TCTAGCCAAGAAGGCTCGGGGAAAACCAGTTCGTTTAAGGCTTTCTTCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCACCATGAATATTTTGTaGGCTGTCTCTAGCACATGG +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLITMNIL*AVSSTW
Trigger: CCATGTGCTAGAGACAGCCAACAAAATATTCATGGT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GGTGTTCTGCATAAGGCTGGAGTTAATGATTTAGATTCCACCCCATTTGATTCTACCATGAATATTTTGTaGGCTGTCTCTAGCACATGG +
Preference number: 5 (lower is better)
Translates to: GVLHKAGVNDLDSTPFDSTMNIL*AVSSTW
Trigger: CCATGTGCTAGAGACAGCCAACAAAATATTCATGGT...AGAATCAAATGGGGTGGAATCTAAATCATTAACTCCAGCCTTATGCAGAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp ATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTGTTACCCTTGGGTTTaGCACAGAGACCAAAGTCAA +
Preference number: 5 (lower is better)
Translates to: IEVNKRILALPLNRIVVICYPWV*HRDQSQ
Trigger: TTGACTTTGGTCTCTGTGCAAAACCCAAGGGTAACA...GATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AGAAAGAAGAAAGCCTTAAACGAACTGGTTTTCCCCGAGCCTTCTTGGCTAGAAGATCCAAGATATGATTaGCCTTGTATTAACTCAGGT +
Preference number: 5 (lower is better)
Translates to: RKKKALNELVFPEPSWLEDPRYD*PCINSG
Trigger: ACCTGAGTTAATACAAGGCAAATCATATCTTGGATC...TTCTAGCCAAGAAGGCTCGGGGAAAACCAGTTCGTTTAAGGCTTTCTTCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GTTTCTGTGATGTACAGAAAGTTCTGTTACGCAATCATCATCGAGGTGAATAAACTGGGAGAGAGCCACTaGGGAACATCATATTTTCCT +
Preference number: 5 (lower is better)
Translates to: VSVMYRKFCYAIIIEVNKLGESH*GTSYFP
Trigger: AGGAAAATATGATGTTCCCAAGTGGCTCTCTCCCAG...TTTATTCACCTCGATGATGATTGCGTAACAGAACTTTCTGTACATCACAGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAGGATAGTTGTAATCTaGCATGATCCAGGGATGGTT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIRIVVI*HDPGMV
Trigger: AACCATCCCTGGATCATGCAAGATTACAACTATCCT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS CCA 90 bp TTTTTATCCATGATTTTTATAGCTACCATCTCTCCAGTAAGGATATaGCAGGCAAGTTTGACCTTTGCAAAGCCACCTGTCCCAATAGTT +
Preference number: 5 (lower is better)
Translates to: FLSMIFIATISPVRI*QASLTFAKPPVPIV
Trigger: AACTATTGGGACAGGTGGCTTTGCAAAGGTCAAACTTGCCTGCCATATCCTTACTGGAGAGATGGTAGCTATAAAAATCATGGATAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000489766.5
ENST00000495529.5
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5
CDS-3UTR CAA 90 bp CTCAGGAAACATAAAGTACTCTTCATTCTTTACAGCAGACTTAGGAGTATATACGTCCACCTGCAGCATTaGTTGAAGAAGCAGAATGCT +
Preference number: 5 (lower is better)
Translates to: LRKHKVLFILYSRLRSIYVHLQH*LKKQNA
Trigger: AGCATTCTGCTTCTTCAACAAATGCTGCAGGTGGAC...GTATATACTCCTAAGTCTGCTGTAAAGAATGAAGAGTACTTTATGTTTCCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp ATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCAGGATAGTTGTAATCTaGCATGATCCAGGGATGGTT +
Preference number: 5 (lower is better)
Translates to: IEVNKRILALPLNRIVVIRIVVI*HDPGMV
Trigger: AACCATCCCTGGATCATGCAAGATTACAACTATCCT...GATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCAAAAGGATTCTTGCTTaGCCACTCAACAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIKRILA*PLNRIV
Trigger: AACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCTCCAATTATTTGACTaGATGTCTGTGAATGGGGTA +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLILQLFD*MSVNGV
Trigger: TACCCCATTCACAGACATCAAGTCAAATAATTGGAG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAATCTGACTGTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAAAGGCTCCCAAACACTTaGGCTCCCTTTCTTTTTGGA +
Preference number: 5 (lower is better)
Translates to: QNLTVFDTSVYNPFVQSQRLPNT*APFLFG
Trigger: TCCAAAAAGAAAGGGAGCCAAAGTGTTTGGGAGCCT...TTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACACAGTCAGATTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCTCCATCAATTATACCTaGCAGCTAGATAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLISINYT*QLDRMS
Trigger: AGACATCCTATCTAGCTGCAAGGTATAATTGATGGA...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCGATCCAAGATATGATTaGCCTTGTATTAACTCAGGT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIDPRYD*PCINSG
Trigger: ACCTGAGTTAATACAAGGCAAATCATATCTTGGATC...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp ATCCAGGGATGGTTCAATAGATTTTTCATAGAAATCCGTTTCTTTGGGTCCACCGATCCAAGATATGATTaGCCTTGTATTAACTCAGGT +
Preference number: 5 (lower is better)
Translates to: IQGWFNRFFIEIRFFGSTDPRYD*PCINSG
Trigger: ACCTGAGTTAATACAAGGCAAATCATATCTTGGATC...GGTGGACCCAAAGAAACGGATTTCTATGAAAAATCTATTGAACCATCCCTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp ATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCAAAAGGATTCTTGCTTaGCCACTCAACAGGATAGTT +
Preference number: 5 (lower is better)
Translates to: IEVNKRILALPLNRIVVIKRILA*PLNRIV
Trigger: AACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTT...GATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCACACCTGTCATTAACTaGTCTGTTCCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLITPVIN*SVPVEF
Trigger: AAATTCAACAGGAACAGACAAGTTAATGACAGGTGT...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GTTGAATTTACTGGTATTTTAATTGGAGTTTCTTTCAGGCACTGGTTTCTAGCTTCCATATGTGCTTGGTaGAGATCCAATTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: VEFTGILIGVSFRHWFLASICAW*RSNSTE
Trigger: CTCAGTGGAATTGGATCTCAACCAAGCACATATGGA...AGCTAGAAACCAGTGCCTGAAAGAAACTCCAATTAAAATACCAGTAAATTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CTCAGGAAACATAAAGTACTCTTCATTCTTTACAGCAGACTTAGGAGTATATACTCCATATGTGCTTGGTaGAGATCCAATTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: LRKHKVLFILYSRLRSIYSICAW*RSNSTE
Trigger: CTCAGTGGAATTGGATCTCAACCAAGCACATATGGA...GTATATACTCCTAAGTCTGCTGTAAAGAATGAAGAGTACTTTATGTTTCCTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATCAAAGCGATCATAACAGTCTTTATGTAGGCTGTATCACACCCACACTCATCCAGTGTATAACCCTTTaGTACAAAGTCAACATGCTT +
Preference number: 5 (lower is better)
Translates to: NQSDHNSLYVGCITPTLIQCITL*YKVNML
Trigger: AAGCATGTTGACTTTGTACAAAAGGGTTATACACTG...GATGAGTGTGGGTGTGATACAGCCTACATAAAGACTGTTATGATCGCTTTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000298048.7
ENST00000536329.5
ENST00000536860.5
ENST00000536987.5
ENST00000541717.4
ENST00000543751.5
ENST00000545008.5
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp CAAAATCTGACTGTGTTTGACACTTCAGTGTATAACCCTTTTGTACAAAGTCAAACCATGAATATTTTGTaGGCTGTCTCTAGCACATGG +
Preference number: 5 (lower is better)
Translates to: QNLTVFDTSVYNPFVQSQTMNIL*AVSSTW
Trigger: CCATGTGCTAGAGACAGCCAACAAAATATTCATGGT...TTGACTTTGTACAAAAGGGTTATACACTGAAGTGTCAAACACAGTCAGATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp ATCATCGAGGTGAATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAACACCTGTCATTAACTaGTCTGTTCCTGTTGAATTT +
Preference number: 5 (lower is better)
Translates to: IIEVNKRILALPLNRIVVTPVIN*SVPVEF
Trigger: AAATTCAACAGGAACAGACAAGTTAATGACAGGTGT...TACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATTCACCTCGATGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp GTTTCTGTGATGTACAGAAAGTTCTGTTACGCAATCATCATCGAGGTGAATAAATCCATCAATTATACCTaGCAGCTAGATAGGATGTCT +
Preference number: 5 (lower is better)
Translates to: VSVMYRKFCYAIIIEVNKSINYT*QLDRMS
Trigger: AGACATCCTATCTAGCTGCAAGGTATAATTGATGGA...TTTATTCACCTCGATGATGATTGCGTAACAGAACTTTCTGTACATCACAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000626154.2
ENST00000627766.2
CDS-3UTR CAA 90 bp AATAAAAGGATTCTTGCTTTGCCACTCAACAGGATAGTTGTAATCTTGCATGATGATCCAAGATATGATTaGCCTTGTATTAACTCAGGT +
Preference number: 5 (lower is better)
Translates to: NKRILALPLNRIVVILHDDPRYD*PCINSG
Trigger: ACCTGAGTTAATACAAGGCAAATCATATCTTGGATC...ATCATGCAAGATTACAACTATCCTGTTGAGTGGCAAAGCAAGAATCCTTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS TCA 72 bp AACTGCGACTGCGGCGGGCAGGCGGGAGAACTGACCTaGGGGGCGGAGGGCACGGCTGAGCGGCGCCCGACA +
Preference number: 6 (lower is better)
Translates to: NCDCGGQAGELT*GAEGTAERRPT
Trigger: TGTCGGGCGCCGCTCAGCCGTGCCCTCCGCCCCTCAGGTCAGTTCTCCCGCCTGCCCGCCGCAGTCGCAGTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487398.3
CDS TCA 72 bp GGCGGGAGAACTGACCTGAGGGGCGGAGGGCACGGCTaGGCGGCGCCCGACAGAAGGACAGGGGCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GGRTDLRGGGHG*AAPDRRTGACC
Trigger: ACAGCAGGCCCCTGTCCTTCTGTCGGGCGCCGCTCAGCCGTGCCCTCCGCCCCTCAGGTCAGTTCTCCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487398.3
CDS CCA 72 bp CCTCCAGTCTCCCGAGAGCCAGGAGCAAACTGGGTTTaGGCCGCTGCGCCCCGCACAGCCCAGACCCCAGCC +
Preference number: 6 (lower is better)
Translates to: PPVSREPGANWV*AAAPRTAQTPA
Trigger: GGCTGGGGTCTGGGCTGTGCGGGGCGCAGCGGCCCAAACCCAGTTTGCTCCTGGCTCTCGGGAGACTGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487398.3
CDS CAA 72 bp GGTACGGCGTTCCTAAGAATCTTTTCGATCGCCGGGTaGTGGCCGCTTCCGCCCGCCAAGGGAATCAAATCT +
Preference number: 6 (lower is better)
Translates to: GTAFLRIFSIAG*WPLPPAKGIKS
Trigger: AGATTTGATTCCCTTGGCGGGCGGAAGCGGCCACAACCCGGCGATCGAAAAGATTCTTAGGAACGCCGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536329.5
ENST00000536860.5
ENST00000541717.4
ENST00000543751.5
ENST00000627766.2
CDS TCA 72 bp TACTATCTGACGGAAGACAACCCGGGTCTCCTCTTCTaGCAGGCGATCCTGGGAAATTATATAGTCAAACAG +
Preference number: 6 (lower is better)
Translates to: YYLTEDNPGLLF*QAILGNYIVKQ
Trigger: CTGTTTGACTATATAATTTCCCAGGATCGCCTGTCAGAAGAGGAGACCCGGGTTGTCTTCCGTCAGATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000298048.7
ENST00000487398.3
ENST00000536329.5
ENST00000541717.4
ENST00000543751.5
ENST00000625974.2
ENST00000626154.2
ENST00000627766.2
CDS TCA 72 bp GATGTCTCAGGTTCTTCAAGGCCTCAATCTCCGTTTTaGTCCGGGGCAAATCACTCTGTCCCAATAGTTTCA +
Preference number: 6 (lower is better)
Translates to: DVSGSSRPQSPF*SGANHSVPIVS
Trigger: TGAAACTATTGGGACAGAGTGATTTGCCCCGGATCAAAACGGAGATTGAGGCCTTGAAGAACCTGAGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000487398.3
ENST00000543751.5
ENST00000627766.2
CDS CAA 72 bp GCTACCATCTCTCCAGTAAGGATATGGCAGGCAAGTTaGACCTTTGCAAAGCCACCTGTCCCAATAGTTTCA +
Preference number: 6 (lower is better)
Translates to: ATISPVRIWQAS*TFAKPPVPIVS
Trigger: TGAAACTATTGGGACAGGTGGCTTTGCAAAGGTCAAACTTGCCTGCCATATCCTTACTGGAGAGATGGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000298048.7
ENST00000489766.5
ENST00000495529.5
ENST00000536860.5
ENST00000541717.4
ENST00000545008.5