Pregenerated sensors for MEIS3 (Homo sapiens)
Ensembl gene IDs: ENSG00000105419Ensembl transcript IDs: ENST00000331559.9, ENST00000559524.5, ENST00000561040.1, ENST00000561096.5, ENST00000561204.5, ENST00000561293.5, ENST00000607695.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | ACTCTGGAAGTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTaGAGAATTGCACAATCCCCAGCCCTTAGACCCTCACACCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TLEVPTLGVLRSNGG*RIAQSPALRPSHLS Trigger: GGAGAGGTGTGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCACTTCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| 3UTR TCA 72 bp | CAAGCCTCAGAGAACCCACAGTACAGGGACCCAGGCTaGCCCACTACTCTGGAAGTGCCCACTCTTGGAGTC | + |
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Preference number: 3 (lower is better) Translates to: QASENPQYRDPG*PTTLEVPTLGV Trigger: GACTCCAAGAGTGGGCACTTCCAGAGTAGTGGGTCAGCCTGGGTCCCTGTACTGTGGGTTCTCTGAGGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR TCA 90 bp | TTCCCATCAAGCCTCAGAGAACCCACAGTACAGGGACCCAGGCTGACCCACTACTGGCCGGCCGCAGTCTaGACCCCAAGGTCTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: FPSSLREPTVQGPRLTHYWPAAV*TPRSGP Trigger: TGGGCCAGACCTTGGGGTTCAGACTGCGGCCGGCCA...GTAGTGGGTCAGCCTGGGTCCCTGTACTGTGGGTTCTCTGAGGCTTGATGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR GCA 90 bp | TTCCCATCAAGCCTCAGAGAACCCACAGTACAGGGACCCAGGCTGACCCACTACTCCGAGGGGTACGGGTaGTGCAGCCACCAGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: FPSSLREPTVQGPRLTHYSEGYG*CSHQQE Trigger: CTCTTGCTGGTGGCTGCAGCACCCGTACCCCTCGGA...GTAGTGGGTCAGCCTGGGTCCCTGTACTGTGGGTTCTCTGAGGCTTGATGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCCTTAGACCCTCACTGAACCCCAAGGTCTaGCCCACCGGGGTCCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LRSNGGLRIAQSPALRPSLNPKV*PTGVRG Trigger: CCCCCGGACCCCGGTGGGCCAGACCTTGGGGTTCAG...TGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR TCA 90 bp | ACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCGAGAACCGGCGCTTCTaGGCGTCTCGAGAGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TLGVLRSNGGLRIAQSPAENRRF*ASREVL Trigger: CAGCACCTCTCGAGACGCTCAGAAGCGCCGGTTCTC...GGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR GCA 90 bp | ACTCTGGAAGTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGAAGCTAGCCAGGGCTaGGGGGCCATCCACGATGCC | + |
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Preference number: 4 (lower is better) Translates to: TLEVPTLGVLRSNGGLRIEASQG*GAIHDA Trigger: GGCATCGTGGATGGCCCCGCAGCCCTGGCTAGCTTC...AATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCACTTCCAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR GCA 90 bp | ACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCAAGAGTCACTCTGCCTaGCTGGCCGGCCGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TLGVLRSNGGLRIAQSPAKSHSA*LAGRSL Trigger: CAGACTGCGGCCGGCCAGGCAGGCAGAGTGACTCTT...GGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR GCA 90 bp | ACTCTGGAAGTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTCAGCAAGAGTCACTCTaGCTGCCTGGCCGGCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: TLEVPTLGVLRSNGGLRIQQESL*LPGRPQ Trigger: CTGCGGCCGGCCAGGCAGGCAGAGTGACTCTTGCTG...AATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCACTTCCAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | TTCCCATCAAGCCTCAGAGAACCCACAGTACAGGGACCCAGGCTGACCCACTACCAGTGTGGAGGTAGATaGATGAGTGGGTTGGCGAGT | + |
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Preference number: 4 (lower is better) Translates to: FPSSLREPTVQGPRLTHYQCGGR*MSGLAS Trigger: ACTCGCCAACCCACTCATCCATCTACCTCCACACTG...GTAGTGGGTCAGCCTGGGTCCCTGTACTGTGGGTTCTCTGAGGCTTGATGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | TTCCCATCAAGCCTCAGAGAACCCACAGTACAGGGACCCAGGCTGACCCACTACGAGTGGGTAGATGGATaGATACATGGAGGAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FPSSLREPTVQGPRLTHYEWVDG*IHGGGG Trigger: TCCTCCTCCTCCATGTATCCATCCATCTACCCACTC...GTAGTGGGTCAGCCTGGGTCCCTGTACTGTGGGTTCTCTGAGGCTTGATGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR TCA 90 bp | ACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCTACAGGGACCCAGGCTaGCCCACTACTCTGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: TLGVLRSNGGLRIAQSPAYRDPG*PTTLEV Trigger: CACTTCCAGAGTAGTGGGTCAGCCTGGGTCCCTGTA...GGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR TCA 90 bp | TCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCCTTAGACCCTCACACCTCGTGGAGGTAGATGGATaGGTGGGTTGGCGAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SNGGLRIAQSPALRPSHLVEVDG*VGWRVE Trigger: CTCCACTCGCCAACCCACTCATCCATCTACCTCCAC...GAGGTGTGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR GCA 90 bp | ACTCTGGAAGTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGAGGGGTACGGGTGCTaGAGCCACCAGCAAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TLEVPTLGVLRSNGGLRIEGYGC*SHQQES Trigger: TGACTCTTGCTGGTGGCTGCAGCACCCGTACCCCTC...AATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCACTTCCAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | TTCCCATCAAGCCTCAGAGAACCCACAGTACAGGGACCCAGGCTGACCCACTACGAGTGGAGAGATGAATaGAGTGAGTGGGTGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: FPSSLREPTVQGPRLTHYEWRDE*SEWVNV Trigger: CACATTCACCCACTCACTCCATTCATCTCTCCACTC...GTAGTGGGTCAGCCTGGGTCCCTGTACTGTGGGTTCTCTGAGGCTTGATGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | TTCCCATCAAGCCTCAGAGAACCCACAGTACAGGGACCCAGGCTGACCCACTACAAATGGGTAGATGTGTaGGTGGTTGGTCAGTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: FPSSLREPTVQGPRLTHYKWVDV*VVGQCG Trigger: TCCACACTGACCAACCACCCACACATCTACCCATTT...GTAGTGGGTCAGCCTGGGTCCCTGTACTGTGGGTTCTCTGAGGCTTGATGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| 3UTR CAA 72 bp | GTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTaGAGAATTGCACAATCCCCAGCCCTTAGACCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VPTLGVLRSNGG*RIAQSPALRPS Trigger: TGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | ACTCTGGAAGTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTTTGTCGCACAGGTCGTaGACCTTCTCCAGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TLEVPTLGVLRSNGGLRILSHRS*TFSSSS Trigger: GCTGGAGCTGGAGAAGGTCCACGACCTGTGCGACAA...AATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCACTTCCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | TCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCCTTAGACCCTCACACCTCGCTGACCCACTACTCTaGAAGTGCCCACTCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: SNGGLRIAQSPALRPSHLADPLL*KCPLLE Trigger: CTCCAAGAGTGGGCACTTCCAGAGTAGTGGGTCAGC...GAGGTGTGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | ACTCTGGAAGTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTAGGTGGGTGGAAGCCTaGGTAGGGAGGTGGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: TLEVPTLGVLRSNGGLRIRWVEA*VGRWVN Trigger: ATTCACCCACCTCCCTACCCAGGCTTCCACCCACCT...AATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCACTTCCAGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCCTTAGACCCTCAGAGTGGGTAGGTGGGTaGACTAGGTTTGGATGGATG | + |
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Preference number: 4 (lower is better) Translates to: LRSNGGLRIAQSPALRPSEWVGG*TRFGWM Trigger: CATCCATCCAAACCTAGTCCACCCACCTACCCACTC...TGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | CTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCCTTAGACCCTCACAGATGGGTAATGAGTaGGTAGGTGGGTGGACTAGG | + |
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Preference number: 4 (lower is better) Translates to: LRSNGGLRIAQSPALRPSQMGNE*VGGWTR Trigger: CCTAGTCCACCCACCTACCCACTCATTACCCATCTG...TGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR TCA 90 bp | ACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCAATGGAGTGAGTGGGTaGATGTGTGGTCAGATGGGT | + |
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Preference number: 4 (lower is better) Translates to: TLGVLRSNGGLRIAQSPANGVSG*MCGQMG Trigger: ACCCATCTGACCACACATTCACCCACTCACTCCATT...GGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | ACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCGCCTGGGTAGGGAGGTaGGTGAATGCACAGATAAAT | + |
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Preference number: 4 (lower is better) Translates to: TLGVLRSNGGLRIAQSPAAWVGR*VNAQIN Trigger: ATTTATCTGTGCATTCACCCACCTCCCTACCCAGGC...GGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR TCA 90 bp | ACTCTGGAAGTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGGACGGACAGATGGATaGATATCTTCCCATCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: TLEVPTLGVLRSNGGLRIGRTDG*ISSHQA Trigger: GGCTTGATGGGAAGATATTCATCCATCTGTCCGTCC...AATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCACTTCCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | TCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCCTTAGACCCTCACACCTCGATGAATGGAGTGAGTaGGTGAATGTGTGGTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SNGGLRIAQSPALRPSHLDEWSE*VNVWSD Trigger: ATCTGACCACACATTCACCCACTCACTCCATTCATC...GAGGTGTGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS-3UTR CCA 90 bp | ACTCTGGAAGTGCCCACTCTTGGAGTCCTGAGGTCTAATGGAGGTTTGAGAATTGAATGCACAGATAAATaGGTAGATGTGTGGGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: TLEVPTLGVLRSNGGLRIECTDK*VDVWVV Trigger: AACCACCCACACATCTACCCATTTATCTGTGCATTC...AATTCTCAAACCTCCATTAGACCTCAGGACTCCAAGAGTGGGCACTTCCAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS GCA 90 bp | CCGAGGGGTACGGGTGCTGCAGCCACCAGCAAGAGTCACTCTGCCTaGCTGGCCGGCCGCAGTCTGAACCCCAAGGTCTGGCCCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: PRGTGAAATSKSHSA*LAGRSLNPKVWPTG Trigger: CCCGGTGGGCCAGACCTTGGGGTTCAGACTGCGGCCGGCCAGGCAGGCAGAGTGACTCTTGCTGGTGGCTGCAGCACCCGTACCCCTCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000331559.9 ENST00000559524.5 ENST00000561293.5 ENST00000607695.1 |
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| CDS TCA 90 bp | TGGGGAGCCCAGGCCCAGGCAGACGTCTGGGAGAACCGGCGCTTCTaGGCGTCTCTGCGCTCCCCAGGATGGAGACCAAGGGAGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: WGAQAQADVWENRRF*ASLRSPGWRPREPQ Trigger: CTGAGGCTCCCTTGGTCTCCATCCTGGGGAGCGCAGAGACGCTCAGAAGCGCCGGTTCTCCCAGACGTCTGCCTGGGCCTGGGCTCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607695.1 |
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| CDS GCA 90 bp | TCCTCCGAGGGGTACGGGTGCTGCAGCCACCAGCAAGAGTCACTCTaGCTGCCTGGCCGGCCGCAGTCTGAACCCCAAGGTCTGGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SSEGYGCCSHQQESL*LPGRPQSEPQGLAH Trigger: GTGGGCCAGACCTTGGGGTTCAGACTGCGGCCGGCCAGGCAGGCAGAGTGACTCTTGCTGGTGGCTGCAGCACCCGTACCCCTCGGAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000331559.9 ENST00000559524.5 ENST00000561293.5 ENST00000607695.1 |
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| CDS TCA 90 bp | CAGGGGGATGTCCCGCCTTCCACCCACCCCTCCTCGCTGGCTCTCTaGCTCGGTGTGTGGTGGGTGGGAGGTGCCCACCTGCTTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: QGDVPPSTHPSSLAL*LGVWWVGGAHLLGK Trigger: TTTGCCAAGCAGGTGGGCACCTCCCACCCACCACACACCGAGTCAGAGAGCCAGCGAGGAGGGGTGGGTGGAAGGCGGGACATCCCCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS GCA 90 bp | AGGCCCAGGCAGACGTCTGGGAGAACCGGCGCTTCTGAGCGTCTCTaGGCTCCCCAGGATGGAGACCAAGGGAGCCTCAGGCTTGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RPRQTSGRTGASERL*APQDGDQGSLRLGA Trigger: TGCCCCAAGCCTGAGGCTCCCTTGGTCTCCATCCTGGGGAGCGCAGAGACGCTCAGAAGCGCCGGTTCTCCCAGACGTCTGCCTGGGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000607695.1 |
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| CDS CCA 90 bp | GCGTCTCTGCGCTCCCCAGGATGGAGACCAAGGGAGCCTCAGGCTTaGGGCAATTACATGCCTGCCAGCCCCCGCCGAGAGGTGCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: ASLRSPGWRPREPQA*GNYMPASPRREVLE Trigger: TTCCAGCACCTCTCGGCGGGGGCTGGCAGGCATGTAATTGCCCCAAGCCTGAGGCTCCCTTGGTCTCCATCCTGGGGAGCGCAGAGACGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607695.1 |
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| CDS CCA 90 bp | CTCGCACGGGAAGAGGCTAGAACGTTCCTGCCTCGGACCCTCGCCTaGCTGGGCACCCTGGTTCTGTGTGTCCCACTCTTTCCCTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LAREEARTFLPRTLA*LGTLVLCVPLFPSP Trigger: GGGAGAGGGAAAGAGTGGGACACACAGAACCAGGGTGCCCAGCCAGGCGAGGGTCCGAGGCAGGAACGTTCTAGCCTCTTCCCGTGCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561204.5 |
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| CDS GCA 90 bp | TCAAAGAGGCAGCAGGACTCGCACGGGAAGAGGCTAGAACGTTCCTaGCTCGGACCCTCGCCTGGCTGGGCACCCTGGTTCTGTGTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SKRQQDSHGKRLERS*LGPSPGWAPWFCVS Trigger: GGACACACAGAACCAGGGTGCCCAGCCAGGCGAGGGTCCGAGGCAGGAACGTTCTAGCCTCTTCCCGTGCGAGTCCTGCTGCCTCTTTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561204.5 |
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| CDS TCA 90 bp | TTCTCAGACTCTAGGCTGTACCACACGGCACGTGGGCAACAATCATaGCGGTTTGGGGACATGGACCAGGTGGCCTTCTCTCTGCACCCC | + |
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Preference number: 5 (lower is better) Translates to: FSDSRLYHTARGQQS*RFGDMDQVAFSLHP Trigger: GGGGTGCAGAGAGAAGGCCACCTGGTCCATGTCCCCAAACCGTCATGATTGTTGCCCACGTGCCGTGTGGTACAGCCTAGAGTCTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS GCA 90 bp | CCTAACTTCTCCTGTGCCCTGAAGTTGAATCCAACTGCTCCCCGCTaGTCAAGGCACTCTCACCAAAAGCGGTCCTCACAGCCTACCCGG | + |
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Preference number: 5 (lower is better) Translates to: PNFSCALKLNPTAPR*SRHSHQKRSSQPTR Trigger: CCGGGTAGGCTGTGAGGACCGCTTTTGGTGAGAGTGCCTTGAGCAGCGGGGAGCAGTTGGATTCAACTTCAGGGCACAGGAGAAGTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561204.5 |
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| CDS-3UTR CAA 90 bp | TTCCCATCAAGCCTCAGAGAACCCACAGTACAGGGACCCAGGCTGACCCACTACGTGGGTGGACTAGGTTaGGATGGATGGATTGCGGGT | + |
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Preference number: 5 (lower is better) Translates to: FPSSLREPTVQGPRLTHYVGGLG*DGWIAG Trigger: ACCCGCAATCCATCCATCCAAACCTAGTCCACCCAC...GTAGTGGGTCAGCCTGGGTCCCTGTACTGTGGGTTCTCTGAGGCTTGATGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS CCA 90 bp | GAGAGACGGCAGGGTCTGGCTGGGAGGGAAAAGAGATGGAGAAAGTaGCGTGAGAAGACAGTGACAGAGACAGAGAGAGAGACAGACAGA | + |
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Preference number: 5 (lower is better) Translates to: ERRQGLAGREKRWRK*REKTVTETERETDR Trigger: TCTGTCTGTCTCTCTCTCTGTCTCTGTCACTGTCTTCTCACGCCACTTTCTCCATCTCTTTTCCCTCCCAGCCAGACCCTGCCGTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561040.1 ENST00000561096.5 |
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| CDS TCA 90 bp | TGGCTGGGAGGGAAAAGAGATGGAGAAAGTGGCGTGAGAAGACAGTaGCAGAGACAGAGAGAGAGACAGACAGAGAGGGAGATCCATGGA | + |
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Preference number: 5 (lower is better) Translates to: WLGGKRDGESGVRRQ*QRQRERQTEREIHG Trigger: TCCATGGATCTCCCTCTCTGTCTGTCTCTCTCTCTGTCTCTGTCACTGTCTTCTCACGCCACTTTCTCCATCTCTTTTCCCTCCCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561040.1 ENST00000561096.5 |
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| CDS TCA 90 bp | CCTCTCCTTGGGCAGCAGTCCCTGCGCTCACTTTGGCATAGGTGCTaGTCTTCTGACGGATGGAACATCAGACACTTTTTGAGCCCTATT | + |
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Preference number: 5 (lower is better) Translates to: PLLGQQSLRSLWHRC*SSDGWNIRHFLSPI Trigger: AATAGGGCTCAAAAAGTGTCTGATGTTCCATCCGTCAGAAGATCAGCACCTATGCCAAAGTGAGCGCAGGGACTGCTGCCCAAGGAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS TCA 90 bp | GGCATAGGTGCTGATCTTCTGACGGATGGAACATCAGACACTTTTTaGGCCCTATTCTGTGCCAGGTGCTGTTCCACGCACTTGAATCGC | + |
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Preference number: 5 (lower is better) Translates to: GIGADLLTDGTSDTF*ALFCARCCSTHLNR Trigger: GCGATTCAAGTGCGTGGAACAGCACCTGGCACAGAATAGGGCTCAAAAAGTGTCTGATGTTCCATCCGTCAGAAGATCAGCACCTATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS CCA 90 bp | ACAGTGACAGAGACAGAGAGAGAGACAGACAGAGAGGGAGATCCATaGACACCTCCTGTAGGAACCGCGCATTGTTGTACACAAAGTACA | + |
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Preference number: 5 (lower is better) Translates to: TVTETERETDREGDP*TPPVGTAHCCTQST Trigger: TGTACTTTGTGTACAACAATGCGCGGTTCCTACAGGAGGTGTCCATGGATCTCCCTCTCTGTCTGTCTCTCTCTCTGTCTCTGTCACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561040.1 ENST00000561096.5 |
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| CDS-3UTR CAA 90 bp | CTGAGGTCTAATGGAGGTTTGAGAATTGCACAATCCCCAGCCCTTAGACCCTCAAGGTCTAATGGAGGTTaGAGAATTGCACAATCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LRSNGGLRIAQSPALRPSRSNGG*RIAQSP Trigger: TGGGGATTGTGCAATTCTCAAACCTCCATTAGACCT...TGAGGGTCTAAGGGCTGGGGATTGTGCAATTCTCAAACCTCCATTAGACCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000559524.5 |
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| CDS GCA 90 bp | TCTTCTGACGGATGGAACATCAGACACTTTTTGAGCCCTATTCTGTaGCAGGTGCTGTTCCACGCACTTGAATCGCATTCACTCATTAAA | + |
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Preference number: 5 (lower is better) Translates to: SSDGWNIRHFLSPIL*QVLFHALESHSLIK Trigger: TTTAATGAGTGAATGCGATTCAAGTGCGTGGAACAGCACCTGGCACAGAATAGGGCTCAAAAAGTGTCTGATGTTCCATCCGTCAGAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS GCA 72 bp | ACGGGTGCTGCAGCCACCAGCAAGAGTCACTCTGCCTaGCTGGCCGGCCGCAGTCTGAACCCCAAGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: TGAAATSKSHSA*LAGRSLNPKVW Trigger: CCAGACCTTGGGGTTCAGACTGCGGCCGGCCAGGCAGGCAGAGTGACTCTTGCTGGTGGCTGCAGCACCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000331559.9 ENST00000559524.5 ENST00000561293.5 ENST00000607695.1 |
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| CDS GCA 72 bp | GGGTACGGGTGCTGCAGCCACCAGCAAGAGTCACTCTaGCTGCCTGGCCGGCCGCAGTCTGAACCCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: GYGCCSHQQESL*LPGRPQSEPQG Trigger: ACCTTGGGGTTCAGACTGCGGCCGGCCAGGCAGGCAGAGTGACTCTTGCTGGTGGCTGCAGCACCCGTACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000331559.9 ENST00000559524.5 ENST00000561293.5 ENST00000607695.1 |
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| CDS GCA 72 bp | CAGCAGGACTCGCACGGGAAGAGGCTAGAACGTTCCTaGCTCGGACCCTCGCCTGGCTGGGCACCCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: QQDSHGKRLERS*LGPSPGWAPWF Trigger: GAACCAGGGTGCCCAGCCAGGCGAGGGTCCGAGGCAGGAACGTTCTAGCCTCTTCCCGTGCGAGTCCTGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561204.5 |
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| CDS GCA 72 bp | ACCAAGGGAGCCTCAGGCTTGGGGCAATTACATGCCTaGCAGCCCCCGCCGAGAGGTGCTGGAACAACCAGG | + |
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Preference number: 6 (lower is better) Translates to: TKGASGLGQLHA*QPPPRGAGTTR Trigger: CCTGGTTGTTCCAGCACCTCTCGGCGGGGGCTGGCAGGCATGTAATTGCCCCAAGCCTGAGGCTCCCTTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607695.1 |
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| CDS GCA 72 bp | GGAGACCAAGGGAGCCTCAGGCTTGGGGCAATTACATaGCTGCCAGCCCCCGCCGAGAGGTGCTGGAACAAC | + |
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Preference number: 6 (lower is better) Translates to: GDQGSLRLGAIT*LPAPAERCWNN Trigger: GTTGTTCCAGCACCTCTCGGCGGGGGCTGGCAGGCATGTAATTGCCCCAAGCCTGAGGCTCCCTTGGTCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000607695.1 |
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| CDS CCA 72 bp | AGGCTAGAACGTTCCTGCCTCGGACCCTCGCCTGGCTaGGCACCCTGGTTCTGTGTGTCCCACTCTTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: RLERSCLGPSPG*APWFCVSHSFP Trigger: AGGGAAAGAGTGGGACACACAGAACCAGGGTGCCCAGCCAGGCGAGGGTCCGAGGCAGGAACGTTCTAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561204.5 |
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| CDS CCA 72 bp | TGTCCCACTCCTAGCCCTGGAGAGGCAGGGGCGGCTTaGAACAAAAGTAGAGCGAAGGGAAGGACGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: CPTPSPGEAGAA*NKSRAKGRTEE Trigger: CTCCTCCGTCCTTCCCTTCGCTCTACTTTTGTTCCAAGCCGCCCCTGCCTCTCCAGGGCTAGGAGTGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561204.5 |
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| CDS CCA 72 bp | GAAGAGGCTAGAACGTTCCTGCCTCGGACCCTCGCCTaGCTGGGCACCCTGGTTCTGTGTGTCCCACTCTTT | + |
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Preference number: 6 (lower is better) Translates to: EEARTFLPRTLA*LGTLVLCVPLF Trigger: AAAGAGTGGGACACACAGAACCAGGGTGCCCAGCCAGGCGAGGGTCCGAGGCAGGAACGTTCTAGCCTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561204.5 |
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| CDS TCA 72 bp | TCTTGCCCTGTTGCCTGGGCTGGTATGCAGTGGAGCTaGTCAAGGGTCACTACAGCCTCGACCTCTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: SCPVAWAGMQWS*SRVTTASTSWG Trigger: GCCCCAAGAGGTCGAGGCTGTAGTGACCCTTGATCAGCTCCACTGCATACCAGCCCAGGCAACAGGGCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS CAA 72 bp | TGTACCACACGGCACGTGGGCAACAATCATGACGGTTaGGGGACATGGACCAGGTGGCCTTCTCTCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: CTTRHVGNNHDG*GTWTRWPSLCT Trigger: GGTGCAGAGAGAAGGCCACCTGGTCCATGTCCCCAAACCGTCATGATTGTTGCCCACGTGCCGTGTGGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS TCA 72 bp | TCTAGGCTGTACCACACGGCACGTGGGCAACAATCATaGCGGTTTGGGGACATGGACCAGGTGGCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRLYHTARGQQS*RFGDMDQVAFS Trigger: AGAGAAGGCCACCTGGTCCATGTCCCCAAACCGTCATGATTGTTGCCCACGTGCCGTGTGGTACAGCCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS GCA 72 bp | TCCTGTGCCCTGAAGTTGAATCCAACTGCTCCCCGCTaGTCAAGGCACTCTCACCAAAAGCGGTCCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: SCALKLNPTAPR*SRHSHQKRSSQ Trigger: CTGTGAGGACCGCTTTTGGTGAGAGTGCCTTGAGCAGCGGGGAGCAGTTGGATTCAACTTCAGGGCACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000561204.5 |
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| CDS TCA 72 bp | GGGCAGCAGTCCCTGCGCTCACTTTGGCATAGGTGCTaGTCTTCTGACGGATGGAACATCAGACACTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: GQQSLRSLWHRC*SSDGWNIRHFL Trigger: CAAAAAGTGTCTGATGTTCCATCCGTCAGAAGATCAGCACCTATGCCAAAGTGAGCGCAGGGACTGCTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS CAA 72 bp | GGGAGATCCATGGACACCTCCTGTAGGAACCGCGCATaGTTGTACACAAAGTACACATACGAAGCCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: GRSMDTSCRNRA*LYTKYTYEASL Trigger: CAGGGAGGCTTCGTATGTGTACTTTGTGTACAACAATGCGCGGTTCCTACAGGAGGTGTCCATGGATCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561040.1 ENST00000561096.5 |
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| CDS TCA 72 bp | GCTGATCTTCTGACGGATGGAACATCAGACACTTTTTaGGCCCTATTCTGTGCCAGGTGCTGTTCCACGCAC | + |
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Preference number: 6 (lower is better) Translates to: ADLLTDGTSDTF*ALFCARCCSTH Trigger: GTGCGTGGAACAGCACCTGGCACAGAATAGGGCTCAAAAAGTGTCTGATGTTCCATCCGTCAGAAGATCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS CAA 72 bp | AGATCCATGGACACCTCCTGTAGGAACCGCGCATTGTaGTACACAAAGTACACATACGAAGCCTCCCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RSMDTSCRNRAL*YTKYTYEASLS Trigger: AGACAGGGAGGCTTCGTATGTGTACTTTGTGTACAACAATGCGCGGTTCCTACAGGAGGTGTCCATGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561040.1 ENST00000561096.5 |
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| CDS CAA 90 bp | CAGAGAGGGAGATCCATGGACACCTCCTGTAGGAACCGCGCATTGTaGTACACAAAGTACACATACGAAGCCTCCCTGTCTTCTATTTCA | + |
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Preference number: 6 (lower is better) Translates to: QRGRSMDTSCRNRAL*YTKYTYEASLSSIS Trigger: TGAAATAGAAGACAGGGAGGCTTCGTATGTGTACTTTGTGTACAACAATGCGCGGTTCCTACAGGAGGTGTCCATGGATCTCCCTCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561040.1 ENST00000561096.5 |
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| CDS CAA 90 bp | AGACAGAGAGGGAGATCCATGGACACCTCCTGTAGGAACCGCGCATaGTTGTACACAAAGTACACATACGAAGCCTCCCTGTCTTCTATT | + |
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Preference number: 6 (lower is better) Translates to: RQRGRSMDTSCRNRA*LYTKYTYEASLSSI Trigger: AATAGAAGACAGGGAGGCTTCGTATGTGTACTTTGTGTACAACAATGCGCGGTTCCTACAGGAGGTGTCCATGGATCTCCCTCTCTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000561040.1 ENST00000561096.5 |
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| CDS GCA 72 bp | GGATGGAACATCAGACACTTTTTGAGCCCTATTCTGTaGCAGGTGCTGTTCCACGCACTTGAATCGCATTCA | + |
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Preference number: 6 (lower is better) Translates to: GWNIRHFLSPIL*QVLFHALESHS Trigger: TGAATGCGATTCAAGTGCGTGGAACAGCACCTGGCACAGAATAGGGCTCAAAAAGTGTCTGATGTTCCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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| CDS CAA 90 bp | AAAGTACACATACGAAGCCTCCCTGTCTTCTATTTCATTTCACAGTaGGCAGATAAGCGCATCAGAGTAAGTCTCAACAACATGTCACAC | + |
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Preference number: 6 (lower is better) Translates to: KVHIRSLPVFYFISQ*ADKRIRVSLNNMSH Trigger: GTGTGACATGTTGTTGAGACTTACTCTGATGCGCTTATCTGCCAACTGTGAAATGAAATAGAAGACAGGGAGGCTTCGTATGTGTACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561040.1 |
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