RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEFV (Homo sapiens)

Ensembl gene IDs: ENSG00000103313

Ensembl transcript IDs: ENST00000219596.6, ENST00000339854.8, ENST00000536379.5, ENST00000536980.5, ENST00000537682.5, ENST00000538326.5, ENST00000539145.5, ENST00000539154.1, ENST00000541159.5, ENST00000542898.5, ENST00000570511.5, ENST00000572244.5, ENST00000574583.5, ENST00000576315.5

Found 1238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGAGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGCCCACGTCCTCCAGTGAGGCCACAA +
Preference number: 1 (lower is better)
Translates to: RAGRCPGIRGCHMPS*SAQPSGPRPPVRPQ
Trigger: TTGTGGCCTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTGCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 90 bp AGGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACG +
Preference number: 1 (lower is better)
Translates to: RRCFQLCSPRRCPHA*EAPLLAGGSGERWT
Trigger: CGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 90 bp TGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAGGCCACAAAGAAATGCTCTTGCTGC +
Preference number: 1 (lower is better)
Translates to: WDTRVSYAFLICPTI*PTSSSEATKKCSCC
Trigger: GCAGCAAGAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 90 bp TGTCTCCAATGTCCTGCAGAAGTTCCCATTCTGACTGGCACTCCTTaGCCTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCCT +
Preference number: 1 (lower is better)
Translates to: CLQCPAEVPILTGTP*PPVPQSAHRAGRCP
Trigger: AGGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTGCAGGACATTGGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 90 bp CACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTaGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGT +
Preference number: 1 (lower is better)
Translates to: HAWEAPLLAGGSGER*TPGTHFPSSLSPPS
Trigger: ACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 90 bp GAGAGATGCAGTGTTGGGCATTCAGTCAGGCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGT +
Preference number: 1 (lower is better)
Translates to: ERCSVGHSVRPLTTH*TDSQRSCVLPSITC
Trigger: ACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGGCCTGACTGAATGCCCAACACTGCATCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR GCA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATaGAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCAT +
Preference number: 1 (lower is better)
Translates to: SVQEHLRVPPTRGGL*NDSVLPPLKSMVCH
Trigger: ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR TCA 90 bp ATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACAC +
Preference number: 1 (lower is better)
Translates to: ICLPDLPNHLAHVLQ*GHKEMLLLLQEVVH
Trigger: GTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR GCA 90 bp TCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATGCTGTCTTGTCTCCAACCTCCACCT +
Preference number: 1 (lower is better)
Translates to: SLATESCSLSCLWMS*RLPGSMLSCLQPPP
Trigger: AGGTGGAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 90 bp AGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCAGGATCCATGCTGTCTTGTCTCCAA +
Preference number: 1 (lower is better)
Translates to: SSHSLATESCSLSCL*MSCRLPGSMLSCLQ
Trigger: TTGGAGACAAGACAGCATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR GCA 90 bp AGGAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACA +
Preference number: 1 (lower is better)
Translates to: RKLGEPRTMIQLSNL*GPSGSLSHLFPSLT
Trigger: TGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCCTTTCCTGCTTATGGATGTCTTGCA +
Preference number: 1 (lower is better)
Translates to: VLIFLHHYHHPVAIL*RQSHVPFPAYGCLA
Trigger: TGCAAGACATCCATAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR GCA 90 bp AGTTCATTAATCCAGGTACACAAATACTTCTATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: SSLIQVHKYFYPNPV*LRFSRLPISSRQKQ
Trigger: CTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATAGAAGTATTTGTGTACCTGGATTAATGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR TCA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCCTGTTCAGGAGCACCTaGGAGTGCCACCCACCAGGG +
Preference number: 2 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSLFRST*ECHPPG
Trigger: CCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAG...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 2 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp CAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 2 (lower is better)
Translates to: QGDVLGYAGVICLPDLPNAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 2 (lower is better)
Translates to: STKMPTRLGGSFISRRVGGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGCTGTTCAGGAGCACCTaGGAGTGCCACCCACCAGGG +
Preference number: 2 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVLFRST*ECHPPG
Trigger: CCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAG...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR TCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 2 (lower is better)
Translates to: PRAEDRLKGPRERAAGECAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 2 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIIICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 2 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 2 (lower is better)
Translates to: STKMPTRLGGSFISRRVGPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR CAA 90 bp ATGTCTCCAATGTCCTGCAGAAGTTCCCATTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCC +
Preference number: 2 (lower is better)
Translates to: MSPMSCRSSHSDWHS*ASSSPISASSRAMS
Trigger: GGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 2 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 2 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 2 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 2 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGCTGGGAGGCGGAGGTTaGGAGCCAAGATTGCACCAC +
Preference number: 2 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKLGGGG*EPRLHH
Trigger: GTGGTGCAATCTTGGCTCGCAACCTCCGCCTCCCAG...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTCAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: PRAEDRLKGPRERAAGECCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAATGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: TDSQRSCVLPSITCPRAECSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp CACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: HWTDSQRSCVLPSITCPRQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...CCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCGGGGACATATATCCTTaGCGTGGGGTTCTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIGDIYP*RGVLRE
Trigger: TTCCCTCAGAACCCCACGGCAAGGATATATGTCCCC...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTGGGGACATATATCCTTaGCGTGGGGTTCTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: PRAEDRLKGPRERAAGECGDIYP*RGVLRE
Trigger: TTCCCTCAGAACCCCACGGCAAGGATATATGTCCCC...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 2 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: TDSQRSCVLPSITCPRAEICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp GTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 2 (lower is better)
Translates to: VRGAVFFPPSRVPGLKIGSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...ACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSLSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 2 (lower is better)
Translates to: PRAEDRLKGPRERAAGECPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp TTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCACCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 2 (lower is better)
Translates to: LAGGSGERWTPGTHFPSSPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...TGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR TCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFIPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR TCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 2 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAATTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 2 (lower is better)
Translates to: TDSQRSCVLPSITCPRAELTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACGGGGACATATATCCTTaGCGTGGGGTTCTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHGDIYP*RGVLRE
Trigger: TTCCCTCAGAACCCCACGGCAAGGATATATGTCCCC...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACTGGGAGGCGGAGGTTaGGAGCCAAGATTGCACCAC +
Preference number: 2 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRLGGGG*EPRLHH
Trigger: GTGGTGCAATCTTGGCTCGCAACCTCCGCCTCCCAG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 2 (lower is better)
Translates to: STKMPTRLGGSFISRRVGMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTACACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 2 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 2 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: STKMPTRLGGSFISRRVGSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp TCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: SLSPPSSHSLATESCSLSCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...GGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp TCAGCTCCGGAACTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCATTCTTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: SAPELCKMSPMSCRSSHSCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...AGAATGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGTTCCGGAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
3UTR-3UTR GCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGTCAGCTCCGGAACTTTaGTCCAGGTGTTTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: STKMPTRLGGSFISRRVGSAPEL*SRCLVF
Trigger: AAAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGA...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
3UTR-3UTR CCA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: VLRENEGQIFCSGAPESAICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538326.5
3UTR-3UTR CCA 90 bp CACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: HWTDSQRSCVLPSITCPRSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...CCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIISSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 2 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 2 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR TCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 2 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 2 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 2 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR TCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 2 (lower is better)
Translates to: PRAEDRLKGPRERAAGECDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCGGGGACATATATCCTTaGCGTGGGGTTCTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTGDIYP*RGVLRE
Trigger: TTCCCTCAGAACCCCACGGCAAGGATATATGTCCCC...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 2 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
3UTR-3UTR GCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 2 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 2 (lower is better)
Translates to: SSLSPPSSHSLATESCSLAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR GCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCTATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTT +
Preference number: 2 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFIYPNPV*LRFSRL
Trigger: AAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATA...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAACACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 2 (lower is better)
Translates to: TDSQRSCVLPSITCPRAEHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGATCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: PSITCPRAEDRLKGPRERSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: RGVLRENEGQIFCSGAPESLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 2 (lower is better)
Translates to: RGVLRENEGQIFCSGAPERCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR CAA 90 bp GAGGAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAAC +
Preference number: 2 (lower is better)
Translates to: EETRRAQNNDTAVKS*RAIRQPLPLVSKSN
Trigger: GTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp GCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: AQRKSSWRMYRCGIWLSHPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...ATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR TCA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGCTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR TCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 2 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 2 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 2 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp ATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: MIQLSNLCGPSGSLSHLFYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...AAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCCAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: FIHEAQSILLRIMARHGGQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 2 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 2 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCATCAGCTCCGGAACTTTaGTCCAGGTGTTTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSSAPEL*SRCLVF
Trigger: AAAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGA...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
3UTR-3UTR CCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACTTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHLSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR TCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 2 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEITIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTAACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 2 (lower is better)
Translates to: SRHSVTIECECKIQGQKQTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 2 (lower is better)
Translates to: SSLSPPSSHSLATESCSLTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 2 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 2 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp AGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 2 (lower is better)
Translates to: SCVLPSITCPRAEDRLKGLRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...CCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CCA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 2 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 2 (lower is better)
Translates to: PRAEDRLKGPRERAAGECYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: SRLPISSRQKQREQGDIYGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR TCA 90 bp GCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATGAACATTTCCATTTCTaGACGCAGGGTTTCTGTGCA +
Preference number: 2 (lower is better)
Translates to: AQRKSSWRMYRCGIWLSHEHFHF*TQGFCA
Trigger: TGCACAGAAACCCTGCGTTCAGAAATGGAAATGTTC...ATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576315.5
3UTR-3UTR GCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 2 (lower is better)
Translates to: HFPSSLSPPSSHSLATESYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCAGCTCCGGAACTGTaGAAGATGTCTCCAATGTCC +
Preference number: 2 (lower is better)
Translates to: SSLSPPSSHSLATESCSLSAPEL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGTTCCGGAGCTGA...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
3UTR-3UTR CCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 2 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CCA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 2 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACACTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 2 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR TCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 2 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGATATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTT +
Preference number: 2 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRYPNPV*LRFSRL
Trigger: AAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATA...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp GAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCTCAGCTCCGGAACTTTaGTCCAGGTGTTTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: ETRRAQNNDTAVKSLRAISAPEL*SRCLVF
Trigger: AAAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGA...GATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
3UTR-3UTR CCA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTAAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 2 (lower is better)
Translates to: SPPSSHSLATESCSLSCLNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CCA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 2 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 2 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 2 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR GCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 2 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR TCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTCAGCTCCGGAACATTaGACATTTCCATTTCTGAAC +
Preference number: 2 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILSAPEH*TFPFLN
Trigger: GTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGA...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538326.5
3UTR-3UTR GCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 2 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR GCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 2 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 2 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CAA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 3 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR GCA 72 bp GAGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATaGCTTCCTGATCTGCCCAACCATCTGGCCCACGTC +
Preference number: 3 (lower is better)
Translates to: EQGDVLGYAGVI*LPDLPNHLAHV
Trigger: GACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR TCA 72 bp CGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGCCCACGTCCTCCAGTG +
Preference number: 3 (lower is better)
Translates to: RCPGIRGCHMPS*SAQPSGPRPPV
Trigger: CACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 3 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 72 bp TGTCCTGCAGAAGTTCCCATTCTGACTGGCACTCCTTaGCCTCCAGTTCCCCAATCAGCGCATCGAGCAGGG +
Preference number: 3 (lower is better)
Translates to: CPAEVPILTGTP*PPVPQSAHRAG
Trigger: CCCTGCTCGATGCGCTGATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTGCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR TCA 72 bp CCTGATCTGCCCAACCATCTGGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTCTTGCTGCTCCAGGAA +
Preference number: 3 (lower is better)
Translates to: PDLPNHLAHVLQ*GHKEMLLLLQE
Trigger: TTCCTGGAGCAGCAAGAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR GCA 72 bp GAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATaGAACGACTCCGTACTTCCTCCTCTGAAATCCATG +
Preference number: 3 (lower is better)
Translates to: EHLRVPPTRGGL*NDSVLPPLKSM
Trigger: CATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR CCA 72 bp CGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAGGCCACAAAGAAATGC +
Preference number: 3 (lower is better)
Translates to: RVSYAFLICPTI*PTSSSEATKKC
Trigger: GCATTTCTTTGTGGCCTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 72 bp TTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAA +
Preference number: 3 (lower is better)
Translates to: FQLCSPRRCPHA*EAPLLAGGSGE
Trigger: TTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 72 bp AGTGTTGGGCATTCAGTCAGGCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCC +
Preference number: 3 (lower is better)
Translates to: SVGHSVRPLTTH*TDSQRSCVLPS
Trigger: GGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGGCCTGACTGAATGCCCAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR CCA 72 bp GATACAAGGCCAGAAGCAGGAAGAGAGATGCAGTGTTaGGCATTCAGTCAGGCCCCTGACCACCCACTGGAC +
Preference number: 3 (lower is better)
Translates to: DTRPEAGREMQC*AFSQAPDHPLD
Trigger: GTCCAGTGGGTGGTCAGGGGCCTGACTGAATGCCCAACACTGCATCTCTCTTCCTGCTTCTGGCCTTGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCACACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 3 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 3 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp TCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: SITCPRAEDRLKGPRERARIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...TGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 3 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp TTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCAGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 3 (lower is better)
Translates to: LLAGGSGERWTPGTHFPSGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...TGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 3 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR GCA 72 bp CAGCATGTGCCTGAGCGCCAATCAGCTCCGGAACTGTaGAAGATGTCTCCAATGTCCTGCAGAAGTTCCCAT +
Preference number: 3 (lower is better)
Translates to: QHVPERQSAPEL*KMSPMSCRSSH
Trigger: ATGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGTTCCGGAGCTGATTGGCGCTCAGGCACATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
3UTR CCA 72 bp ATGTCTCCAATGTCCTGCAGAAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGTTCCCCAATCAGCGCA +
Preference number: 3 (lower is better)
Translates to: MSPMSCRSSHSD*HSLASSSPISA
Trigger: TGCGCTGATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp GCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: AQRKSSWRMYRCGIWLSHRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...ATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTACCCAATCCAGTCTGCTaGCGTTTCTCTAGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: SPPSSHSLATESCSLSCLPNPVC*RFSRLP
Trigger: GGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGG...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 3 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR TCA 72 bp CAAGATGTCTCCAATGTCCTGCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTCCAGTTCCCCAATCAG +
Preference number: 3 (lower is better)
Translates to: QDVSNVLQKFPF*LALLGLQFPNQ
Trigger: CTGATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTGCAGGACATTGGAGACATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR GCA 72 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCA +
Preference number: 3 (lower is better)
Translates to: GEPRTMIQLSNL*GPSGSLSHLFP
Trigger: TGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR CCA 72 bp TCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCAGGATCCATGCTGTCT +
Preference number: 3 (lower is better)
Translates to: SLATESCSLSCL*MSCRLPGSMLS
Trigger: AGACAGCATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACCCAATCCAGTCTGCTaGCGTTTCTCTAGGCTTCCC +
Preference number: 3 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRPNPVC*RFSRLP
Trigger: GGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 3 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIIHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp TTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCACACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 3 (lower is better)
Translates to: LAGGSGERWTPGTHFPSSHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...TGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 3 (lower is better)
Translates to: FIHEAQSILLRIMARHGGRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGACTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 3 (lower is better)
Translates to: PSITCPRAEDRLKGPRERLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CAA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 3 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: FIHEAQSILLRIMARHGGTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGAAGAGAGATGCAGTGTaGGGCATTCAGTCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: SRHSVTIECECKIQGQKQKRDAV*GIQSGP
Trigger: GGGGCCTGACTGAATGCCCAACACTGCATCTCTCTT...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR GCA 72 bp GTCCACTTTTCAGGGACAGGCACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCCTGCAGAAGTTCCCAT +
Preference number: 3 (lower is better)
Translates to: VHFSGTGTVLAL*KMSPMSCRSSH
Trigger: ATGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGGGCTAAGACAGTGCCTGTCCCTGAAAAGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
3UTR GCA 72 bp AAAAGGAGATGCTTCCAACTCTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCTCCTTTATTAGCAGGC +
Preference number: 3 (lower is better)
Translates to: KRRCFQLCSPRR*PHAWEAPLLAG
Trigger: GCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp ATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 3 (lower is better)
Translates to: IFLHHYHHPVAILWRQSHSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...ATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 3 (lower is better)
Translates to: PRAEDRLKGPRERAAGECEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CAA 90 bp TGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: WTPGTHFPSSLSPPSSHSTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...AGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 3 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR TCA 72 bp GGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATCAGTACATGTCTTCAC +
Preference number: 3 (lower is better)
Translates to: GADYATTPYFLL*NPWCVISTCLH
Trigger: GTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR GCA 72 bp GCACCTAGTCGGCATTCCGTGACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAGCAGGAAGAGAGATGC +
Preference number: 3 (lower is better)
Translates to: APSRHSVTIECE*KIQGQKQEERC
Trigger: GCATCTCTCTTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACTAGGTGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
3UTR GCA 72 bp ACAGAGTCATGTTCCCTTTCCTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATGCTGTCTTGTCTCCAA +
Preference number: 3 (lower is better)
Translates to: TESCSLSCLWMS*RLPGSMLSCLQ
Trigger: TTGGAGACAAGACAGCATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGAACATGACTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp TCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 3 (lower is better)
Translates to: SITCPRAEDRLKGPRERAEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...TGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CAA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 3 (lower is better)
Translates to: KGPRERAAGECIDVGSGCLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR-3UTR CAA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 3 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
3UTR-3UTR CAA 90 bp TCAGCTCCGGAACTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCATTCTCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 3 (lower is better)
Translates to: SAPELCKMSPMSCRSSHSHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...AGAATGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGTTCCGGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
3UTR-3UTR CAA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGATCAGCTCCGGAACTTaGCTCCAGGTGTTTGGTTTT +
Preference number: 3 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQISSGT*LQVFGF
Trigger: AAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGAT...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGATCAGCTCCGGAACTTaGCTCCAGGTGTTTGGTTTT +
Preference number: 3 (lower is better)
Translates to: SRHSVTIECECKIQGQKQISSGT*LQVFGF
Trigger: AAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGAT...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
3UTR-3UTR CAA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAATCAGCTCCGGAACTTaGCTCCAGGTGTTTGGTTTT +
Preference number: 3 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATISSGT*LQVFGF
Trigger: AAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGAT...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
3UTR TCA 72 bp GCCAATCAGCTCCGGAACATTGAACATTTCCATTTCTaGACGCAGGGTTTCTGTGCAAGATGTCTCCAATGT +
Preference number: 3 (lower is better)
Translates to: ANQLRNIEHFHF*TQGFCARCLQC
Trigger: ACATTGGAGACATCTTGCACAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGATTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576315.5
3UTR-3UTR CAA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 3 (lower is better)
Translates to: SRLPISSRQKQREQGDIYHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538326.5
3UTR-3UTR CAA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACACTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 3 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
3UTR GCA 72 bp ATCCAGGTACACAAATACTTCTATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGA +
Preference number: 3 (lower is better)
Translates to: IQVHKYFYPNPV*LRFSRLPISSR
Trigger: TCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATAGAAGTATTTGTGTACCTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATACGCGGGTGGCTGCACCGCAGGCTaGCAGCTCCGCCCCCGTACG +
Preference number: 4 (lower is better)
Translates to: LQFPNQRIEQGDVLGYAGGCTAG*QLRPRT
Trigger: CGTACGGGGGCGGAGCTGCCAGCCTGCGGTGCAGCC...ACCCGCGTATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGCCCCTCCATCCGGAGTaGGCCTTGCCCGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: CPHAWEAPLLAGGSGERWPLHPE*ALPGVL
Trigger: CAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGG...CCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCACACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSHCGRG*GLRLPG
Trigger: CCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTG...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: CPHAWEAPLLAGGSGERWAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...CCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCCGGAGCTGGCGTTTCTaGGCAGCCGGACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSRSWRF*AAGPRP
Trigger: AGGCCGAGGTCCGGCTGCGCAGAAACGCCAGCTCCG...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGGCTGCACCGCAGGCTaGCAGCTCCGCCCCCGTACG +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNGCTAG*QLRPRT
Trigger: CGTACGGGGGCGGAGCTGCCAGCCTGCGGTGCAGCC...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGGCTGCACCGCAGGCTaGCAGCTCCGCCCCCGTACG +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERGCTAG*QLRPRT
Trigger: CGTACGGGGGCGGAGCTGCCAGCCTGCGGTGCAGCC...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCGGGCGACCTCCTCAATaGGGCGCACCCGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSGRPPQ*GAPGGL
Trigger: AAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCC...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTCTGGTGGCCTTCCCTaGATGGCTGCCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERSGGLP*MAALWS
Trigger: GCTCCACAGGGCAGCCATTCAGGGAAGGCCACCAGA...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
CDS-3UTR GCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGTCCGAGGCTTGCCCTaGGCGTCCAGGCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERVRGLP*ASRPSE
Trigger: CTCGGAGGGCCTGGACGCGCAGGGCAAGCCTCGGAC...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCCTTCAGGTCCGCAGATaGCCCTCCATCCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERLQVRR*PSIRSG
Trigger: CCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAG...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCAGGGGTGCCCAGAAACTaGCTCGGGGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSGVPRN*LGEAAG
Trigger: TCCTGCAGCTTCCCCGAGGCAGTTTCTGGGCACCCC...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGCCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: CPHAWEAPLLAGGSGERWPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...CCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTCTCCCGGCCTCGGGCTaGCTGCACCGCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: VRGAVFFPPSRVPGLKIGLPASG*LHRRLA
Trigger: TGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCGGGAG...ACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp AGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCCCCCTCCATCCGGAGTaGGCCTTGCCCGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RAMSWDTRVSYAFLICPTPLHPE*ALPGVL
Trigger: CAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGG...GGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR TCA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTACCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCAACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGCAGGGAGCTGGACGCTaGGGAATCATCTGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: CPHAWEAPLLAGGSGERWQGAGR*GIICAV
Trigger: AACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTG...CCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGCGGCCTCGGGCTGGCTaGACCGCAGGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPERPRAG*TAGWQL
Trigger: GAGCTGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCG...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCGGCCTCGGGCTGGCTaGACCGCAGGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTRPRAG*TAGWQL
Trigger: GAGCTGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCG...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCGGAGCTGGCGTTTCTaGGCAGCCGGACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIRSWRF*AAGPRP
Trigger: AGGCCGAGGTCCGGCTGCGCAGAAACGCCAGCTCCG...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCACACTTCGAAGGGCCTaGACTCCTTCTGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSTLRRA*TPSAPG
Trigger: CCCCGGGGCAGAAGGAGTGCAGGCCCTTCGAAGTGT...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCACTGCCTCGGGGAAGCTaGAGGAATCACGCACACAGG +
Preference number: 4 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSLPRGS*RNHAHR
Trigger: CCTGTGTGCGTGATTCCTGCAGCTTCCCCGAGGCAG...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGCAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATACGCGGGTTCGTTCCCCTCGGGGTaGTCTGGAGTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQFPNQRIEQGDVLGYAGSFPSG*SGVFRL
Trigger: GAGCCTGAAGACTCCAGACCACCCCGAGGGGAACGA...ACCCGCGTATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR CCA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGCTCCCGGCCTCGGGCTaGCTGCACCGCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKLPASG*LHRRLA
Trigger: TGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCGGGAG...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp GTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTGCCTCCCCGCGGAGCTaGCGTTTCTGCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: VRGAVFFPPSRVPGLKIGASPRS*RFCAAG
Trigger: TCCGGCTGCGCAGAAACGCCAGCTCCGCGGGGAGGC...ACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGGCCTCCCCGCGGAGCTaGCGTTTCTGCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGASPRS*RFCAAG
Trigger: TCCGGCTGCGCAGAAACGCCAGCTCCGCGGGGAGGC...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACCACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNHCGRG*GLRLPG
Trigger: CCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTG...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCGGGCGACCTCCTCAATaGGGCGCACCCGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIGRPPQ*GAPGGL
Trigger: AAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCC...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTGGGCGACCTCCTCAATaGGGCGCACCCGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PRAEDRLKGPRERAAGECGRPPQ*GAPGGL
Trigger: AAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCC...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTGGTGGGTGCATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTGGCIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATGCACCCACC...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GAGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: EQGDVLGYAGVICLPDLPTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...GGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGCCGAGGCCTTCTCTCTaGGTTTGCTCAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGPRPSL*VCSGAS
Trigger: GGAAGCCCCTGAGCAAACGCAGAGAGAAGGCCTCGG...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCGTCCGAGGCTTGCCCTaGGCGTCCAGGCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQIVRGLP*ASRPSE
Trigger: CTCGGAGGGCCTGGACGCGCAGGGCAAGCCTCGGAC...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCTCCGGGTCCGAGGCTTaGCCTGCGCGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTSGSEA*PARPGP
Trigger: AGGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGA...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCCGGAGTGGGCCTTaGCCGGGGTTCTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: RAMSWDTRVSYAFLICPTIRSGP*PGFCCR
Trigger: TCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGAT...GGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR CCA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTAACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGACCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TKMPTRLGGSFISRRVGGPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...TCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VRGAVFFPPSRVPGLKIGSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...ACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGACCCCTCGGGGTGGTCTaGAGTCTTCAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERPLGVV*SLQAPG
Trigger: CCCAGGAGCCTGAAGACTCCAGACCACCCCGAGGGG...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCGCCTCCCCGCGGAGCTaGCGTTTCTGCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: SGERWTPGTHFPSSLSPPASPRS*RFCAAG
Trigger: TCCGGCTGCGCAGAAACGCCAGCTCCGCGGGGAGGC...GGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGCCCCTCCATCCGGAGTaGGCCTTGCCCGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKPLHPE*ALPGVL
Trigger: CAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGG...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGGGGCGACCTCCTCAATaGGGCGCACCCGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKGRPPQ*GAPGGL
Trigger: AAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCC...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGGCGACCTCCTCAATaGGGCGCACCCGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAAGRPPQ*GAPGGL
Trigger: AAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCC...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCACTCGCAGCCGTGTCTaGTGGCCTTCCCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSTRSRV*WPSLNG
Trigger: GCCATTCAGGGAAGGCCACCAGACACGGCTGCGAGT...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536980.5
CDS-3UTR TCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: PRAEDRLKGPRERAAGECAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPEPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAACCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: TDSQRSCVLPSITCPRAEPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCTGGCCTTGGTGCTCCTaGCTCAGACTGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: PNQRIEQGDVLGYAGVICWPWCS*LRLQMR
Trigger: CCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCA...GCATATGACACCCGCGTATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR TCA 90 bp ACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGATGGCCTTGGTGCTCCTaGCTCAGACTGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: TKMPTRLGGSFISRRVGGWPWCS*LRLQMR
Trigger: CCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCA...TCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGACTGTTCAGGAGCACCTaGGAGTGCCACCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERLFRST*ECHPPG
Trigger: CCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAG...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: DTRVSYAFLICPTIWPTSRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...GGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GRGNAGRLVLIFLHHYHHMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...GTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQIMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCGGCCTCGGGCTGGCTaGACCGCAGGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHRPRAG*TAGWQL
Trigger: GAGCTGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCG...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCCGGCCTCGGGCTGGCTaGACCGCAGGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLSPPSSHSLATESCSLSRPRAG*TAGWQL
Trigger: GAGCTGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCG...GGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCCTTCTCTCTGCGTTTaGTCAGGGGCTTCCTCGACA +
Preference number: 4 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTPSLCV*SGASST
Trigger: TGTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGG...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GACAGGCACTGTCTTAGCCCTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCTCCGGGTCCGAGGCTTaGCCTGCGCGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: DRHCLSPVQDVSNVLQKFSGSEA*PARPGP
Trigger: AGGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGA...GAACTTCTGCAGGACATTGGAGACATCTTGCACAGGGCTAAGACAGTGCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR GCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGCGGAGCTGGCGTTTCTaGGCAGCCGGACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPERSWRF*AAGPRP
Trigger: AGGCCGAGGTCCGGCTGCGCAGAAACGCCAGCTCCG...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTGCCCGGGGTTCTGTTaGCGAGTCCAGATTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDCPGFC*RVQIRS
Trigger: GCTGCGAATCTGGACTCGGCAACAGAACCCCGGGCA...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACATCCGGAGTGGGCCTTaGCCGGGGTTCTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNIRSGP*PGFCCR
Trigger: TCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGAT...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCATCCGGAGTGGGCCTTaGCCGGGGTTCTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSIRSGP*PGFCCR
Trigger: TCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGAT...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTCAGGTCCGCAGATaGCCCTCCATCCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLLQVRR*PSIRSG
Trigger: CCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAG...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCACTGGGAGGCGGAGGTTaGGAGCCAAGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: SRAMSWDTRVSYAFLICPLGGGG*EPRLHH
Trigger: GTGGTGCAATCTTGGCTCGCAACCTCCGCCTCCCAG...TGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR CCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEILALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACCCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGYAGVICLPDLPNHLAHPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...GTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCTCCAGTGAGGCCACACCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: YAFLICPTIWPTSSSEATPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...TGTGGCCTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPESASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: AVKSLRAIRQPLPLVSKSSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...AGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCTCCCGGCCTCGGGCTaGCTGCACCGCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: MIQLSNLCGPSGSLSHLFLPASG*LHRRLA
Trigger: TGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCGGGAG...AAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCAGCCTCCCCGCGGAGCTaGCGTTTCTGCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: QNNDTAVKSLRAIRQPLPASPRS*RFCAAG
Trigger: TCCGGCTGCGCAGAAACGCCAGCTCCGCGGGGAGGC...TGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTCTTTCATGGGAGTCCTaGCACCGGGGGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PRAEDRLKGPRERAAGECLSWES*HRGQPG
Trigger: ACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAG...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCTTTCATGGGAGTCCTaGCACCGGGGGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEILSWES*HRGQPG
Trigger: ACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAG...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGCACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LRAIRQPLPLVSKSNTLQHCGRG*GLRLPG
Trigger: CCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTG...CTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGCACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPEHCGRG*GLRLPG
Trigger: CCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTG...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATCACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDHCGRG*GLRLPG
Trigger: CCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTG...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGTGGACCTGCTTCAGGTaGCGCTTACACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGWTCFR*RLHCGR
Trigger: CCTGCCACAGTGTAAGCGCCACCTGAAGCAGGTCCA...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCGGGCGACCTCCTCAATaGGGCGCACCCGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQIGRPPQ*GAPGGL
Trigger: AAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCC...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PNQRIEQGDVLGYAGVICICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...GCATATGACACCCGCGTATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCACTCGCAGCCGTGTCTaGTGGCCTTCCTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSTRSRV*WPSCNP
Trigger: GGGATTACAGGAAGGCCACCAGACACGGCTGCGAGT...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339854.8
ENST00000542898.5
CDS-3UTR TCA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCAGATGGGCTCATCGTaGTCCTCACAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTQMGSS*SSQKSS
Trigger: GCTGCTCTTCTGTGAGGATCACGATGAGCCCATCTG...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TCCTTGGCCTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGT +
Preference number: 4 (lower is better)
Translates to: SLASSSPISASSRAMSWDDSDCR*GRWAHR
Trigger: ACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTC...ATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAGGCCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR TCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: RLGGSFISRRVGGTLDAWDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...CCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp ACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TKMPTRLGGSFISRRVGGGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...TCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCATTCAGTCAGGCCCCTaGCCACCCACTGGACAGATA +
Preference number: 4 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSIQSGP*PPTGQI
Trigger: TATCTGTCCAGTGGGTGGTCAGGGGCCTGACTGAAT...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCACTTCAGTTTGTTTCCTaGATGGCTGCCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSLQFVS*MAALWS
Trigger: GCTCCACAGGGCAGCCATTCAGGAAACAAACTGAAG...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGACTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TKMPTRLGGSFISRRVGGLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...TCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: PRAEDRLKGPRERAAGECRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFITCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCCAGGGAGCTGGACGCTaGGGAATCATCTGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: DTRVSYAFLICPTIWPTSQGAGR*GIICAV
Trigger: AACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTG...GGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCACGGCCTCGGGCTGGCTaGACCGCAGGCTGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSRPRAG*TAGWQL
Trigger: GAGCTGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCG...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp TTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATGCCCGGGGTTCTGTTaGCGAGTCCAGATTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGGSGERWTPGTHFPSSCPGFC*RVQIRS
Trigger: GCTGCGAATCTGGACTCGGCAACAGAACCCCGGGCA...TGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGGGGGTGCCCAGAAACTaGCTCGGGGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRGVPRN*LGEAAG
Trigger: TCCTGCAGCTTCCCCGAGGCAGTTTCTGGGCACCCC...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCGGGGTGCCCAGAAACTaGCTCGGGGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIIGVPRN*LGEAAG
Trigger: TCCTGCAGCTTCCCCGAGGCAGTTTCTGGGCACCCC...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACGGGGTGCCCAGAAACTaGCTCGGGGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHGVPRN*LGEAAG
Trigger: TCCTGCAGCTTCCCCGAGGCAGTTTCTGGGCACCCC...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFICSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIICSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTCTGGGAGGCGGAGGTTaGGAGCCAAGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: PRAEDRLKGPRERAAGECLGGGG*EPRLHH
Trigger: GTGGTGCAATCTTGGCTCGCAACCTCCGCCTCCCAG...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCAGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: LLAGGSGERWTPGTHFPSGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...TGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPETGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VKSLRAIRQPLPLVSKSNSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...GTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCTCTCCCCCAGGGAGCTaGACGCTGCGGAATCATCTG +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEISPPGS*TLRNHL
Trigger: CAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGA...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCCCCTCGGGGTGGTCTaGAGTCTTCAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCPLGVV*SLQAPG
Trigger: CCCAGGAGCCTGAAGACTCCAGACCACCCCGAGGGG...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCCCCCTCGGGGTGGTCTaGAGTCTTCAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGERWTPGTHFPSSLSPPPLGVV*SLQAPG
Trigger: CCCAGGAGCCTGAAGACTCCAGACCACCCCGAGGGG...GGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTGGCTGCACCGCAGGCTaGCAGCTCCGCCCCCGTACG +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLGCTAG*QLRPRT
Trigger: CGTACGGGGGCGGAGCTGCCAGCCTGCGGTGCAGCC...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGGGCTGCACCGCAGGCTaGCAGCTCCGCCCCCGTACG +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQGCTAG*QLRPRT
Trigger: CGTACGGGGGCGGAGCTGCCAGCCTGCGGTGCAGCC...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTCTTTCATGGGAGTCCTaGCACCGGGGGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAALSWES*HRGQPG
Trigger: ACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAG...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAGGGCTCTTCCTTTCATaGGAGTCCTGGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSGLFLS*ESWHRG
Trigger: CCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCC...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGGCTCTTCCTTTCATaGGAGTCCTGGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAAGLFLS*ESWHRG
Trigger: CCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCC...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRHCGRG*GLRLPG
Trigger: CCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTG...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: DTRVSYAFLICPTIWPTSPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...GGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RAMSWDTRVSYAFLICPTPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...GGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCGCAGCCGTGTCTGGTaGCCTTCCCTGAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGRSRVW*PSLNGC
Trigger: GCAGCCATTCAGGGAAGGCCACCAGACACGGCTGCG...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
CDS-3UTR TCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: AVKSLRAIRQPLPLVSKSAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...AGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: KSLRAIRQPLPLVSKSNTPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...AGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: ETRRAQNNDTAVKSLRAIPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...GATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACTGGCCTTGGTGCTCCTaGCTCAGACTGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNWPWCS*LRLQMR
Trigger: CCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCA...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTTGGCCTTGGTGCTCCTaGCTCAGACTGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIIWPWCS*LRLQMR
Trigger: CCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCA...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: CPHAWEAPLLAGGSGERWDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...CCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RAMSWDTRVSYAFLICPTGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...GGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QGDVLGYAGVICLPDLPNGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACATTCAGTCAGGCCCCTaGCCACCCACTGGACAGATA +
Preference number: 4 (lower is better)
Translates to: QGDVLGYAGVICLPDLPNIQSGP*PPTGQI
Trigger: TATCTGTCCAGTGGGTGGTCAGGGGCCTGACTGAAT...GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR TCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCCTGTTCAGGAGCACCTaGGAGTGCCACCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVLFRST*ECHPPG
Trigger: CCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAG...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAATCTGGTGGCCTTCCCTaGATGGCTGCCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TDSQRSCVLPSITCPRAESGGLP*MAALWS
Trigger: GCTCCACAGGGCAGCCATTCAGGGAAGGCCACCAGA...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
CDS-3UTR GCA 90 bp CACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: HWTDSQRSCVLPSITCPRRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...CCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: KSLRAIRQPLPLVSKSNTMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...AGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGCCGAGGCCTTCTCTCTaGGTTTGCTCAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HWTDSQRSCVLPSITCPRPRPSL*VCSGAS
Trigger: GGAAGCCCCTGAGCAAACGCAGAGAGAAGGCCTCGG...CCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp TTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCACCGAGGCCTTCTCTCTaGGTTTGCTCAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLAGGSGERWTPGTHFPSPRPSL*VCSGAS
Trigger: GGAAGCCCCTGAGCAAACGCAGAGAGAAGGCCTCGG...TGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTGTCCGAGGCTTGCCCTaGGCGTCCAGGCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFVRGLP*ASRPSE
Trigger: CTCGGAGGGCCTGGACGCGCAGGGCAAGCCTCGGAC...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGTCCGGGTCCGAGGCTTaGCCTGCGCGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLSGSEA*PARPGP
Trigger: AGGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGA...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCTCCGGGTCCGAGGCTTaGCCTGCGCGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPSGSEA*PARPGP
Trigger: AGGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGA...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACGGAGCTGGCGTTTCTaGGCAGCCGGACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRRSWRF*AAGPRP
Trigger: AGGCCGAGGTCCGGCTGCGCAGAAACGCCAGCTCCG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCACACTTCGAAGGGCCTaGACTCCTTCTGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSTLRRA*TPSAPG
Trigger: CCCCGGGGCAGAAGGAGTGCAGGCCCTTCGAAGTGT...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGGAGAATTTCTGGATTTaGGGGCGCCTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTENFWI*GRLLPC
Trigger: ACAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTC...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp TTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCCGGAGTGGGCCTTaGCCGGGGTTCTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: LRAIRQPLPLVSKSNTLQIRSGP*PGFCCR
Trigger: TCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGAT...CTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCTTCAGGTCCGCAGATaGCCCTCCATCCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCLQVRR*PSIRSG
Trigger: CCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAG...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGGGGGTGCCCAGAAACTaGCTCGGGGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPEGVPRN*LGEAAG
Trigger: TCCTGCAGCTTCCCCGAGGCAGTTTCTGGGCACCCC...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCCTTGGCCTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SLASSSPISASSRAMSWDYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...ATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAGGCCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCCAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DTRVSYAFLICPTIWPTSQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...GGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGATGTTTCCTGAATGGCTaGCCTGTGGAGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERCFLNG*PVELLG
Trigger: GCCGAGGAGCTCCACAGGGCAGCCATTCAGGAAACA...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTAACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: SPPSSHSLATESCSLSCLTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CCAATCAGCTCCGGAACTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCAACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: PISSGTVQDVSNVLQKFPTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...TGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGTTCCGGAGCTGATTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
CDS-3UTR CCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTTCTCCCCCAGGGAGCTaGACGCTGCGGAATCATCTG +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAASPPGS*TLRNHL
Trigger: CAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGA...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATCTCCCGGCCTCGGGCTaGCTGCACCGCAGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLGFPYPQDRSRENKGTYLPASG*LHRRLA
Trigger: TGCCAGCCTGCGGTGCAGCCAGCCCGAGGCCGGGAG...ATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCGCCTCCCCGCGGAGCTaGCGTTTCTGCGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFASPRS*RFCAAG
Trigger: TCCGGCTGCGCAGAAACGCCAGCTCCGCGGGGAGGC...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTGGTGACCGAATGTTCTaGATTTCCAGGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTGDRMF*ISRAFL
Trigger: AAGGAAGGCCCTGGAAATCCAGAACATTCGGTCACC...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCGCAGCCGTGTCTGGTaGCCTTCCGGTGACCGAATG +
Preference number: 4 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQRSRVW*PSGDRM
Trigger: CATTCGGTCACCGGAAGGCCACCAGACACGGCTGCG...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537682.5
ENST00000538326.5
CDS-3UTR CCA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCGCAGCCGTGTCTGGTaGCCTTCCGGTGACCGAATG +
Preference number: 4 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTRSRVW*PSGDRM
Trigger: CATTCGGTCACCGGAAGGCCACCAGACACGGCTGCG...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537682.5
ENST00000538326.5
CDS-3UTR CCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGACTCGCAGCCGTGTCTaGTGGCCTTCCGGTGACCGA +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVTRSRV*WPSGDR
Trigger: TCGGTCACCGGAAGGCCACCAGACACGGCTGCGAGT...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
CDS-3UTR CCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGCTTTCATGGGAGTCCTaGCACCGGGGGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPELSWES*HRGQPG
Trigger: ACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAG...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCCTTTCATGGGAGTCCTaGCACCGGGGGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVLSWES*HRGQPG
Trigger: ACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAG...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCGGGCTCTTCCTTTCATaGGAGTCCTGGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVGLFLS*ESWHRG
Trigger: CCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCC...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFIICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: SRAMSWDTRVSYAFLICPSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...TGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: PNQRIEQGDVLGYAGVICPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...GCATATGACACCCGCGTATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: AMSWDTRVSYAFLICPTIPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...GATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGGTGGCCTTCCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGVAFPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGGAAGGCCAC...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
CDS-3UTR CCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCCGCAGCCGTGTCTGGTaGCCTTCCCTGAATGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGRSRVW*PSLNGC
Trigger: GCAGCCATTCAGGGAAGGCCACCAGACACGGCTGCG...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
CDS-3UTR CCA 90 bp CACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGACTCGCAGCCGTGTCTaGTGGCCTTCCCTGAATGGC +
Preference number: 4 (lower is better)
Translates to: HWTDSQRSCVLPSITCPRTRSRV*WPSLNG
Trigger: GCCATTCAGGGAAGGCCACCAGACACGGCTGCGAGT...CCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
CDS-3UTR TCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACCTTCCCCATAGTAGGTaGCCAGCAGAGTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNLPHSR*PAEWPS
Trigger: AGATGGCCACTCTGCTGGTCACCTACTATGGGGAAG...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTCAGATGGGCTCATCGTaGTCCTCACAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPQMGSS*SSQKSS
Trigger: GCTGCTCTTCTGTGAGGATCACGATGAGCCCATCTG...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTCAGATGGGCTCATCGTaGTCCTCACAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIIQMGSS*SSQKSS
Trigger: GCTGCTCTTCTGTGAGGATCACGATGAGCCCATCTG...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGT +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNDSDCR*GRWAHR
Trigger: ACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTC...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGT +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERDSDCR*GRWAHR
Trigger: ACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTC...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGT +
Preference number: 4 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLDSDCR*GRWAHR
Trigger: ACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTC...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCAGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: LLAGGSGERWTPGTHFPSAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...TGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCATGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SRAMSWDTRVSYAFLICPCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...TGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR TCA 90 bp ATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCAGCTTCCTCTGCACCCGTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: MLLLLQEVVHLLQLPLHPLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...CGGGTGCAGAGGAAGCTGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCTGTTCAGGAGCACCTaGGAGTGCCACCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRLFRST*ECHPPG
Trigger: CCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAG...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEILECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GRGNAGRLVLIFLHHYHHTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...GTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATCCGGGTCCGAGGCTTaGCCTGCGCGTCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESSGSEA*PARPGP
Trigger: AGGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGA...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGCGGAGCTGGCGTTTCTaGGCAGCCGGACCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQRSWRF*AAGPRP
Trigger: AGGCCGAGGTCCGGCTGCGCAGAAACGCCAGCTCCG...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGACACTTCGAAGGGCCTaGACTCCTTCTGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLTLRRA*TPSAPG
Trigger: CCCCGGGGCAGAAGGAGTGCAGGCCCTTCGAAGTGT...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCTTCAGGTCCGCAGATaGCCCTCCATCCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRLQVRR*PSIRSG
Trigger: CCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAG...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGCTGCCTCGGGGAAGCTaGAGGAATCACGCACACAGG +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPELPRGS*RNHAHR
Trigger: CCTGTGTGCGTGATTCCTGCAGCTTCCCCGAGGCAG...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGCTGCCTCGGGGAAGCTaGAGGAATCACGCACACAGG +
Preference number: 4 (lower is better)
Translates to: LRAIRQPLPLVSKSNTLQLPRGS*RNHAHR
Trigger: CCTGTGTGCGTGATTCCTGCAGCTTCCCCGAGGCAG...CTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCTCCAGTGAGGCCACATTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: YAFLICPTIWPTSSSEATFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...TGTGGCCTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCTTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: DTRVSYAFLICPTIWPTSFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...GGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: CPHAWEAPLLAGGSGERWMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...CCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCACAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LAGGSGERWTPGTHFPSSQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...TGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGACAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: AMSWDTRVSYAFLICPTIGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...GATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGATGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGCTGGGAGGCGGAGGTTaGGAGCCAAGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVLGGGG*EPRLHH
Trigger: GTGGTGCAATCTTGGCTCGCAACCTCCGCCTCCCAG...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AGGCACTGTCTTAGCCCTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCAGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RHCLSPVQDVSNVLQKFPGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...TGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGGGCTAAGACAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
CDS-3UTR CCA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTACTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAATCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQESASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCTGGAATATTCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSWNIPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGAATATTCCA...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCTCTCCCCCAGGGAGCTaGACGCTGCGGAATCATCTG +
Preference number: 4 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQISPPGS*TLRNHL
Trigger: CAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGA...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCTCGTTCCCCTCGGGGTaGTCTGGAGTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGSFPSG*SGVFRL
Trigger: GAGCCTGAAGACTCCAGACCACCCCGAGGGGAACGA...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCACAGGTACCGTCAACTaGGTCTCCTTCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFTGTVN*VSFLGV
Trigger: CACGCCCAGGAAGGAGACCCAGTTGACGGTACCTGT...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTAGGGCTCTTCCTTTCATaGGAGTCCTGGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: SPPSSHSLATESCSLSCLGLFLS*ESWHRG
Trigger: CCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCC...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCCACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGHCGRG*GLRLPG
Trigger: CCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTG...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCGGGCGACCTCCTCAATaGGGCGCACCCGGTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGGRPPQ*GAPGGL
Trigger: AAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCC...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QGDVLGYAGVICLPDLPNSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAAPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTACTCGCAGCCGTGTCTaGTGGCCTTCCTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAATRSRV*WPSCNP
Trigger: GGGATTACAGGAAGGCCACCAGACACGGCTGCGAGT...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542898.5
CDS-3UTR CCA 90 bp CCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCAGTTTGTTTCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PNQRIEQGDVLGYAGVICSLFPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGAAACAAACT...GCATATGACACCCGCGTATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGAGTTTGTTTCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTSLFPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGAAACAAACT...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCCTTCCCCATAGTAGGTaGCCAGCAGAGTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITLPHSR*PAEWPS
Trigger: AGATGGCCACTCTGCTGGTCACCTACTATGGGGAAG...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTCTGGTGGCCTTCCGGTaGCCGAATGTTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: VRGAVFFPPSRVPGLKIGLVAFR*PNVLDF
Trigger: GAAATCCAGAACATTCGGTCACCGGAAGGCCACCAG...ACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537682.5
ENST00000538326.5
CDS-3UTR TCA 90 bp AGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCAGATGGGCTCATCGTaGTCCTCACAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SCVLPSITCPRAEDRLKGQMGSS*SSQKSS
Trigger: GCTGCTCTTCTGTGAGGATCACGATGAGCCCATCTG...CCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGT +
Preference number: 4 (lower is better)
Translates to: HWTDSQRSCVLPSITCPRDSDCR*GRWAHR
Trigger: ACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTC...CCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIILTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCAGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LLAGGSGERWTPGTHFPSGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...TGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCAATTCAGTCAGGCCCCTaGCCACCCACTGGACAGATA +
Preference number: 4 (lower is better)
Translates to: LLAGGSGERWTPGTHFPSIQSGP*PPTGQI
Trigger: TATCTGTCCAGTGGGTGGTCAGGGGCCTGACTGAAT...TGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACTGTTCAGGAGCACCTaGGAGTGCCACCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRLFRST*ECHPPG
Trigger: CCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCTGTTCAGGAGCACCTaGGAGTGCCACCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHLFRST*ECHPPG
Trigger: CCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAG...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGGGTGGGTGCATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVGGCIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATGCACCCACC...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACGATGGGAGGATTGTTTaGGATCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDDGRIV*DQEFET
Trigger: GGTCTCGAACTCCTGATCTCAAACAATCCTCCCATC...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339854.8
ENST00000542898.5
CDS-3UTR TCA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTCAGTTTGTTTCCTaGATGGCTGCCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLLQFVS*MAALWS
Trigger: GCTCCACAGGGCAGCCATTCAGGAAACAAACTGAAG...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGTGTCTCCAATGTCCCTaGATGGCTGCCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKCLQCP*MAALWS
Trigger: GCTCCACAGGGCAGCCATTCAGGGACATTGGAGACA...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572244.5
CDS-3UTR GCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HWTDSQRSCVLPSITCPRLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...CCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VKSLRAIRQPLPLVSKSNTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...GTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCAATCAGCTCCGGAACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: PISSGTLNISISERRVSEMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...CTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
CDS-3UTR GCA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGCCTTCTCTCTGCGTTTaGTCAGGGGCTTCCTCGACA +
Preference number: 4 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKPSLCV*SGASST
Trigger: TGTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGG...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATGTCCGAGGCTTGCCCTaGGCGTCCAGGCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYVRGLP*ASRPSE
Trigger: CTCGGAGGGCCTGGACGCGCAGGGCAAGCCTCGGAC...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTCCGAGGCTTGCCCTaGGCGTCCAGGCCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: IFLHHYHHPVAILWRQSHVRGLP*ASRPSE
Trigger: CTCGGAGGGCCTGGACGCGCAGGGCAAGCCTCGGAC...ATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGAGAATTTCTGGATTTaGGGGCGCCTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNENFWI*GRLLPC
Trigger: ACAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTC...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTATGCCCGGGGTTCTGTTaGCGAGTCCAGATTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLCPGFC*RVQIRS
Trigger: GCTGCGAATCTGGACTCGGCAACAGAACCCCGGGCA...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACTTCAGGTCCGCAGATaGCCCTCCATCCGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRLQVRR*PSIRSG
Trigger: CCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCTGCCTCGGGGAAGCTaGAGGAATCACGCACACAGG +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRLPRGS*RNHAHR
Trigger: CCTGTGTGCGTGATTCCTGCAGCTTCCCCGAGGCAG...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGAAGAGCAGCTGGACCTaGTTCAGGTGGCGCTTACAC +
Preference number: 4 (lower is better)
Translates to: SCVLPSITCPRAEDRLKGKSSWT*FRWRLH
Trigger: GTGTAAGCGCCACCTGAAGCAGGTCCAGCTGCTCTT...CCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCTTTCAGAAAGCTCACTaGCTTCTCCTCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSFQKAH*LLLPIG
Trigger: TCCTATGGGGAGGAGAAGGCAGTGAGCTTTCTGAAA...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACTTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTTTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: PRAEDRLKGPRERAAGECFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCACACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: SRAMSWDTRVSYAFLICPHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...TGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: RAMSWDTRVSYAFLICPTHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...GGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCTCCAGTGAGGCCACACACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: YAFLICPTIWPTSSSEATHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...TGTGGCCTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCATGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIICSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAACSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCGGGGACATATATCCTTaGCGTGGGGTTCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLGDIYP*RGVLRE
Trigger: TTCCCTCAGAACCCCACGGCAAGGATATATGTCCCC...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERYPNPV*LRFSRL
Trigger: AAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATA...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGAGCACAAGGGAACACTaGAACAACCCCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGSTREH*NNPRPA
Trigger: TGCTGGCCTGGGGTTGTTGCAGTGTTCCCTTGTGCT...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCTGTTTCCTGAATGGCTaGCCTGTGGAGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGCFLNG*PVELLG
Trigger: GCCGAGGAGCTCCACAGGGCAGCCATTCAGGAAACA...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAGACAAGGAACCCCCTaGTTAGGGCCCTGCATGCTA +
Preference number: 4 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIIRQGTP*LGPCML
Trigger: TAGCATGCAGGGCCCTAAGCAGGGGGTTCCTTGTCT...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000541159.5
CDS-3UTR CCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CAGAATCACATTAACAGCATGTGCCTGAGCGCCAATCAGCTCCGGAACATTGAAACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: QNHINSMCLSANQLRNIETGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...TTCAATGTTCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTGATTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGTCGGCCAGCAGGCGCTaGTTGATGGCCCGCAGGACC +
Preference number: 4 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQSASRR*LMARRT
Trigger: GGTCCTGCGGGCCATCAACCAGCGCCTGCTGGCCGA...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTGGAATATTCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDWNIPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGAATATTCCA...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACGTCCTGGAATATTCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DTRVSYAFLICPTIWPTSWNIPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGAATATTCCA...GGACGTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR CCA 90 bp GTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACTCTCCCCCAGGGAGCTaGACGCTGCGGAATCATCTG +
Preference number: 4 (lower is better)
Translates to: VKSLRAIRQPLPLVSKSNSPPGS*TLRNHL
Trigger: CAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGA...GTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCCCCCTCGGGGTGGTCTaGAGTCTTCAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPPLGVV*SLQAPG
Trigger: CCCAGGAGCCTGAAGACTCCAGACCACCCCGAGGGG...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCGCCAATCAGCTCCGGAACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTCCCCTCGGGGTGGTCTaGAGTCTTCAGGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: APISSGTLNISISERRVSPLGVV*SLQAPG
Trigger: CCCAGGAGCCTGAAGACTCCAGACCACCCCGAGGGG...AGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGATTGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR CCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCACAGGTACCGTCAACTaGGTCTCCTTCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGTGTVN*VSFLGV
Trigger: CACGCCCAGGAAGGAGACCCAGTTGACGGTACCTGT...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: AMSWDTRVSYAFLICPTIPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...GATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGGAACCCAGGCCATGTTaGGGACTGTGGTCATTGAAC +
Preference number: 4 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLEPRPC*GLWSLN
Trigger: GTTCAATGACCACAGTCCCCAACATGGCCTGGGTTC...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541159.5
CDS-3UTR TCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCCTTCCCCATAGTAGGTaGCCAGCAGAGTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVLPHSR*PAEWPS
Trigger: AGATGGCCACTCTGCTGGTCACCTACTATGGGGAAG...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGGCAGGACCTGCAGGGTaGGCTGCACGGCGTACTCTT +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWAGPAG*AARRTL
Trigger: AAGAGTACGCCGTGCAGCTCACCCTGCAGGTCCTGC...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACCAGCAGGCGCTGGTTaGTGGCCCGCAGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVPAGAG*WPAGPA
Trigger: TGCAGGTCCTGCGGGCCATCAACCAGCGCCTGCTGG...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCTCGCTGCTCCTCCCCTaGTTTTCTCAGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIISLLLP*FSQLLQ
Trigger: CTGAAGAAGCTGAGAAAATCAGGGGAGGAGCAGCGA...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCATCGCTGCTCCTCCCCTaGTTTTCTCAGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSSLLLP*FSQLLQ
Trigger: CTGAAGAAGCTGAGAAAATCAGGGGAGGAGCAGCGA...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRAIRQPLPLVSKSNTLQQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...CTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCAGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAGGTGGGTGCATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLGGCIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATGCACCCACC...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GAAGTTCCCATTCTGACTGGCACTCCTTGGCCTCCAGTTCCCCAATCAGCGCATCTTCAGTTTGTTTCCTaGATGGCTGCCCTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EVPILTGTPWPPVPQSAHLQFVS*MAALWS
Trigger: GCTCCACAGGGCAGCCATTCAGGAAACAAACTGAAG...ATGCGCTGATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAATGGCCCGCAGGACCTaGAGGGTGAGCTGCACGGCG +
Preference number: 4 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKMARRT*RVSCTA
Trigger: CGCCGTGCAGCTCACCCTGCAGGTCCTGCGGGCCAT...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGGGAGCTGGACGCTaGGGAATCATCTGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRQGAGR*GIICAV
Trigger: AACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTG...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCCCTTCTCTCTGCGTTTaGTCAGGGGCTTCCTCGACA +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVPSLCV*SGASST
Trigger: TGTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGG...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCCGAGGCCTTCTCTCTaGGTTTGCTCAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHPRPSL*VCSGAS
Trigger: GGAAGCCCCTGAGCAAACGCAGAGAGAAGGCCTCGG...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCCGAGGCCTTCTCTCTaGGTTTGCTCAGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: KSLRAIRQPLPLVSKSNTPRPSL*VCSGAS
Trigger: GGAAGCCCCTGAGCAAACGCAGAGAGAAGGCCTCGG...AGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACACTTCGAAGGGCCTaGACTCCTTCTGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFTLRRA*TPSAPG
Trigger: CCCCGGGGCAGAAGGAGTGCAGGCCCTTCGAAGTGT...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGACACTTCGAAGGGCCTaGACTCCTTCTGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQTLRRA*TPSAPG
Trigger: CCCCGGGGCAGAAGGAGTGCAGGCCCTTCGAAGTGT...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCTGCCTCGGGGAAGCTaGAGGAATCACGCACACAGG +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHLPRGS*RNHAHR
Trigger: CCTGTGTGCGTGATTCCTGCAGCTTCCCCGAGGCAG...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTGGGGTGCCCAGAAACTaGCTCGGGGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLGVPRN*LGEAAG
Trigger: TCCTGCAGCTTCCCCGAGGCAGTTTCTGGGCACCCC...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAAGAGCAGCTGGACCTaGTTCAGGTGGCGCTTACAC +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPEKSSWT*FRWRLH
Trigger: GTGTAAGCGCCACCTGAAGCAGGTCCAGCTGCTCTT...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCAAGAGCAGCTGGACCTaGTTCAGGTGGCGCTTACAC +
Preference number: 4 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSKSSWT*FRWRLH
Trigger: GTGTAAGCGCCACCTGAAGCAGGTCCAGCTGCTCTT...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAAAGAGCAGCTGGACCTaGTTCAGGTGGCGCTTACAC +
Preference number: 4 (lower is better)
Translates to: TDSQRSCVLPSITCPRAEKSSWT*FRWRLH
Trigger: GTGTAAGCGCCACCTGAAGCAGGTCCAGCTGCTCTT...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCAAGAGCAGCTGGACCTaGTTCAGGTGGCGCTTACAC +
Preference number: 4 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSKSSWT*FRWRLH
Trigger: GTGTAAGCGCCACCTGAAGCAGGTCCAGCTGCTCTT...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ETRRAQNNDTAVKSLRAICSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...GATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCAGCTTCCTCTTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: QRNALAAPGSSTPAPASSCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...AGAGGAAGCTGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SCVLPSITCPRAEDRLKGYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...CCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFIHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAACAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TDSQRSCVLPSITCPRAEQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCCAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: LRAIRQPLPLVSKSNTLQGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...CTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: AVKSLRAIRQPLPLVSKSGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...AGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGATGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: PRAEDRLKGPRERAAGECCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: APESATHQGRIMQRLRTSSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTCCTTCCCTGAATGGCTaGCCTGTGGAGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLPSLNG*PVELLG
Trigger: GCCGAGGAGCTCCACAGGGCAGCCATTCAGGGAAGG...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
CDS-3UTR GCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCAGCACAAGGGAACACTaGAACAACCCCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVSTREH*NNPRPA
Trigger: TGCTGGCCTGGGGTTGTTGCAGTGTTCCCTTGTGCT...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTTCAGCTCCGGAACTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PRAEDRLKGPRERAAGECSAPEL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGTTCCGGAGCTGA...ACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
CDS-3UTR CCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGGTGGACAGCAGATaGTCACTAGGGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDRVDSR*SLGVLA
Trigger: GGCTAAGACCCCTAGTGACCATCTGCTGTCCACCCT...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAAGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQEGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGGGCTCCGGGGGATCCTaGAGTGCTCCTTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWGSGGS*SAPSAH
Trigger: GTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCC...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: MIQLSNLCGPSGSLSHLFPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...AAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACCCCTCCATCCGGAGTaGGCCTTGCCCGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVPLHPE*ALPGVL
Trigger: CAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGG...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCGGTGACCGAATGTTCTaGATTTCCAGGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIGDRMF*ISRAFL
Trigger: AAGGAAGGCCCTGGAAATCCAGAACATTCGGTCACC...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCGCAGCCGTGTCTGGTaGCCTTCCGGTGACCGAATG +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFRSRVW*PSGDRM
Trigger: CATTCGGTCACCGGAAGGCCACCAGACACGGCTGCG...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
CDS-3UTR CCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACTCGCAGCCGTGTCTaGTGGCCTTCCGGTGACCGA +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLATRSRV*WPSGDR
Trigger: TCGGTCACCGGAAGGCCACCAGACACGGCTGCGAGT...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537682.5
ENST00000538326.5
CDS-3UTR CCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGGGGCTCTTCCTTTCATaGGAGTCCTGGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLGLFLS*ESWHRG
Trigger: CCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCC...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPESRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQISRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGTTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGLSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp CTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATACGCGGGTACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: LQFPNQRIEQGDVLGYAGTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...ACCCGCGTATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
CDS-3UTR CCA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFISLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTGTGGCCTTCCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: MIQLSNLCGPSGSLSHLFVAFPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGGAAGGCCAC...AAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
3UTR CAA 72 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RRAQNNDTAVKS*RAIRQPLPLVS
Trigger: GGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCCAGATGGGCTCATCGTaGTCCTCACAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VLRENEGQIFCSGAPESAQMGSS*SSQKSS
Trigger: GCTGCTCTTCTGTGAGGATCACGATGAGCCCATCTG...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTACAGATGGGCTCATCGTaGTCCTCACAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLQMGSS*SSQKSS
Trigger: GCTGCTCTTCTGTGAGGATCACGATGAGCCCATCTG...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCAGCTTCCTCTGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: QRNALAAPGSSTPAPASSAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...AGAGGAAGCTGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCCTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR TCA 90 bp GTGAGGCCACAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCATTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: VRPQRNALAAPGSSTPAPLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...TGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTGGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGGTGGGTGCATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: NNDTAVKSLRAIRQPLPLGGCIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATGCACCCACC...AAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACGATGGGAGGATTGTTTaGGATCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHDGRIV*DQEFET
Trigger: GGTCTCGAACTCCTGATCTCAAACAATCCTCCCATC...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTGCACACTGGTGTTCTaGAGCTTGAACTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDCTLVF*SLNLNF
Trigger: GAAGTTCAAGTTCAAGCTGCAGAACACCAGTGTGCA...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAACGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQERGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCATGCCCGGGGTTCTGTTaGCGAGTCCAGATTCGCAGC +
Preference number: 4 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSCPGFC*RVQIRS
Trigger: GCTGCGAATCTGGACTCGGCAACAGAACCCCGGGCA...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGCTGCCTCGGGGAAGCTaGAGGAATCACGCACACAGG +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQLPRGS*RNHAHR
Trigger: CCTGTGTGCGTGATTCCTGCAGCTTCCCCGAGGCAG...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATGGGGTGCCCAGAAACTaGCTCGGGGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLGFPYPQDRSRENKGTYGVPRN*LGEAAG
Trigger: TCCTGCAGCTTCCCCGAGGCAGTTTCTGGGCACCCC...ATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCTTTCAGAAAGCTCACTaGCTTCTCCTCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFIFQKAH*LLLPIG
Trigger: TCCTATGGGGAGGAGAAGGCAGTGAGCTTTCTGAAA...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCTTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTTTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: AVKSLRAIRQPLPLVSKSFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...AGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SGERWTPGTHFPSSLSPPYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...GGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGCTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGLRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp GTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: VKSLRAIRQPLPLVSKSNGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...GTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: SCVLPSITCPRAEDRLKGCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...CCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTGGCCCACTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGYAGVICLPDLPNHLAHSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...GTGGGCCAGATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VLRENEGQIFCSGAPESACSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RCPHAWEAPLLAGGSGERHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...GCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCCTGGGAGGCGGAGGTTaGGAGCCAAGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPLGGGG*EPRLHH
Trigger: GTGGTGCAATCTTGGCTCGCAACCTCCGCCTCCCAG...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTAACACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCCCTTCCCTGAATGGCTaGCCTGTGGAGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SNTLQIIREDEVGVSGFCPSLNG*PVELLG
Trigger: GCCGAGGAGCTCCACAGGGCAGCCATTCAGGGAAGG...GCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGTGTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536980.5
ENST00000541159.5
CDS-3UTR GCA 90 bp CAGAATCACATTAACAGCATGTGCCTGAGCGCCAATCAGCTCCGGAACATTGAAATGTCCCTGAATGGCTaGCCTGTGGAGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: QNHINSMCLSANQLRNIEMSLNG*PVELLG
Trigger: GCCGAGGAGCTCCACAGGGCAGCCATTCAGGGACAT...TTCAATGTTCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTGATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572244.5
CDS-3UTR GCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTAACGCAGGGTTTCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPNAGFL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGAAACCCTGCGTT...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576315.5
CDS-3UTR GCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTTCAGCTCCGGAACTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAASAPEL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGTTCCGGAGCTGA...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
CDS-3UTR CCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATC +
Preference number: 4 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKTGLAL*IWLRGI
Trigger: GATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGT...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCCCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGTGCCGTTTTCTTGTGTaGAATATTCCTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTCRFLV*NIPEWL
Trigger: CAGCCATTCAGGAATATTCCACACAAGAAAACGGCA...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTTCGTTCCCCTCGGGGTaGTCTGGAGTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFSFPSG*SGVFRL
Trigger: GAGCCTGAAGACTCCAGACCACCCCGAGGGGAACGA...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCAGTCAGGAGAATTTCTaGATTTGCGGGCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFSQENF*ICGRLL
Trigger: GAGAAGGCGCCCGCAAATCCAGAAATTCTCCTGACT...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTCCCCTCCATCCGGAGTaGGCCTTGCCCGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFPLHPE*ALPGVL
Trigger: CAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGG...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTACTCGCAGCCGTGTCTaGTGGCCTTCCGGTGACCGA +
Preference number: 4 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSTRSRV*WPSGDR
Trigger: TCGGTCACCGGAAGGCCACCAGACACGGCTGCGAGT...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
CDS-3UTR CCA 90 bp TCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATCTTTCATGGGAGTCCTaGCACCGGGGGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SLGFPYPQDRSRENKGTYLSWES*HRGQPG
Trigger: ACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAG...ATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGCTTTCATGGGAGTCCTaGCACCGGGGGCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILLSWES*HRGQPG
Trigger: ACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAG...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATGGGCTCTTCCTTTCATaGGAGTCCTGGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: SLGFPYPQDRSRENKGTYGLFLS*ESWHRG
Trigger: CCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCC...ATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGGGGCTCTTCCTTTCATaGGAGTCCTGGCACCGGGGG +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILGLFLS*ESWHRG
Trigger: CCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCC...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGTGGACCTGCTTCAGGTaGCGCTTACACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGWTCFR*RLHCGR
Trigger: CCTGCCACAGTGTAAGCGCCACCTGAAGCAGGTCCA...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: VLRENEGQIFCSGAPESASRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCCTTGGCCTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SLASSSPISASSRAMSWDNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...ATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAGGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
CDS-3UTR CCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp AGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SCVLPSITCPRAEDRLKGSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...CCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQIPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIIGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: GGSGERWTPGTHFPSSLSRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...TGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAARCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGAGAGATGCAGTGTTaGGCATTCAGTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPEREMQC*AFSQAP
Trigger: AGGGGCCTGACTGAATGCCCAACACTGCATCTCTCT...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCTGGTGGCCTTCCGGTaGCCGAATGTTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHLVAFR*PNVLDF
Trigger: GAAATCCAGAACATTCGGTCACCGGAAGGCCACCAG...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
CDS-3UTR TCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTTGGCCTTGGTGCTCCTaGCTCAGACTGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFWPWCS*LRLQMR
Trigger: CCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCA...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGTCGCTGCTCCTCCCCTaGTTTTCTCAGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRSLLLP*FSQLLQ
Trigger: CTGAAGAAGCTGAGAAAATCAGGGGAGGAGCAGCGA...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTATGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: SPPSSHSLATESCSLSCLCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGGCACTGTCTTAGCCCTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCATGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: RHCLSPVQDVSNVLQKFPCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...TGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGGGCTAAGACAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
CDS-3UTR TCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCCTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR TCA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp ATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTTTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: MIQLSNLCGPSGSLSHLFLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...AAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SLSPPSSHSLATESCSLSGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...GGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCAGCTTCCTCTGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QRNALAAPGSSTPAPASSGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...AGAGGAAGCTGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCATTCAGTCAGGCCCCTaGCCACCCACTGGACAGATA +
Preference number: 4 (lower is better)
Translates to: ETRRAQNNDTAVKSLRAIIQSGP*PPTGQI
Trigger: TATCTGTCCAGTGGGTGGTCAGGGGCCTGACTGAAT...GATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: GRGNAGRLVLIFLHHYHHPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...GTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTGGTGGGTGCATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLGGCIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATGCACCCACC...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCGAACATTTCCATTTCTaGACGCAGGGTTTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLEHFHF*TQGFCA
Trigger: TGCACAGAAACCCTGCGTTCAGAAATGGAAATGTTC...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576315.5
CDS-3UTR GCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTG +
Preference number: 4 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQRGILE*SFCTLV
Trigger: CACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCG...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCAACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGCAGGGAGCTGGACGCTaGGGAATCATCTGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQQGAGR*GIICAV
Trigger: AACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTG...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCCCTTCTCTCTGCGTTTaGTCAGGGGCTTCCTCGACA +
Preference number: 4 (lower is better)
Translates to: ETRRAQNNDTAVKSLRAIPSLCV*SGASST
Trigger: TGTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGG...GATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GACAGGCACTGTCTTAGCCCTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCGAGAATTTCTGGATTTaGGGGCGCCTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: DRHCLSPVQDVSNVLQKFENFWI*GRLLPC
Trigger: ACAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTC...GAACTTCTGCAGGACATTGGAGACATCTTGCACAGGGCTAAGACAGTGCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR GCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATATCCGGAGTGGGCCTTaGCCGGGGTTCTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYIRSGP*PGFCCR
Trigger: TCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGAT...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCTTTCAGAAAGCTCACTaGCTTCTCCTCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITFQKAH*LLLPIG
Trigger: TCCTATGGGGAGGAGAAGGCAGTGAGCTTTCTGAAA...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: SLRAIRQPLPLVSKSNTLYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...AAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIIMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCAACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LLAGGSGERWTPGTHFPSTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...TGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCAGCTTCCTCTGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: QRNALAAPGSSTPAPASSGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...AGAGGAAGCTGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: ETRRAQNNDTAVKSLRAIGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...GATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: SGERWTPGTHFPSSLSPPCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...GGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: STKMPTRLGGSFISRRVGHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCGGGGACATATATCCTTaGCGTGGGGTTCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VLRENEGQIFCSGAPESAGDIYP*RGVLRE
Trigger: TTCCCTCAGAACCCCACGGCAAGGATATATGTCCCC...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLYPNPV*LRFSRL
Trigger: AAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATA...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGCATATCCTGAATGGCTaGCCTGTGGAGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLHILNG*PVELLG
Trigger: GCCGAGGAGCTCCACAGGGCAGCCATTCAGGATATG...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339854.8
CDS-3UTR GCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCAACCAGAAAGCTCACTaGCTTCTCCTCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVNQKAH*LLLPIG
Trigger: TCCTATGGGGAGGAGAAGGCAGTGAGCTTTCTGGTT...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR GCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGATCAGCTCCGGAACTTTaGTCCAGGTGTTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERSAPEL*SRCLVF
Trigger: AAAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGA...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCTCCCCCAGGGAGCTaGACGCTGCGGAATCATCTG +
Preference number: 4 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSSPPGS*TLRNHL
Trigger: CAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGA...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACAGTCAGGAGAATTTCTaGATTTGCGGGCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GRGNAGRLVLIFLHHYHHSQENF*ICGRLL
Trigger: GAGAAGGCGCCCGCAAATCCAGAAATTCTCCTGACT...GTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGTCAGGAGAATTTCTaGATTTGCGGGCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDSQENF*ICGRLL
Trigger: GAGAAGGCGCCCGCAAATCCAGAAATTCTCCTGACT...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACAGGTACCGTCAACTaGGTCTCCTTCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFTGTVN*VSFLGV
Trigger: CACGCCCAGGAAGGAGACCCAGTTGACGGTACCTGT...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCTGGACCTGCTTCAGGTaGCGCTTACACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFWTCFR*RLHCGR
Trigger: CCTGCCACAGTGTAAGCGCCACCTGAAGCAGGTCCA...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTGGACCTGCTTCAGGTaGCGCTTACACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLWTCFR*RLHCGR
Trigger: CCTGCCACAGTGTAAGCGCCACCTGAAGCAGGTCCA...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: SLSPPSSHSLATESCSLSSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...GGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: QNNDTAVKSLRAIRQPLPPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...TGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQIGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LRAIRQPLPLVSKSNTLQGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...CTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGATATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: TKMPTRLGGSFISRRVGGYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...TCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CAGAATCACATTAACAGCATGTGCCTGAGCGCCAATCAGCTCCGGAACATTGAACCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QNHINSMCLSANQLRNIEPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...TTCAATGTTCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGCCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGCTTCCCCATAGTAGGTaGCCAGCAGAGTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQLPHSR*PAEWPS
Trigger: AGATGGCCACTCTGCTGGTCACCTACTATGGGGAAG...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCAGATGGGCTCATCGTaGTCCTCACAGAAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFQMGSS*SSQKSS
Trigger: GCTGCTCTTCTGTGAGGATCACGATGAGCCCATCTG...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAAGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGT +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQEDSDCR*GRWAHR
Trigger: ACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTC...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCACAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLAQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTACTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SPPSSHSLATESCSLSCLLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR TCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCTCAGCTCCGGAACATTaGACATTTCCATTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEISAPEH*TFPFLN
Trigger: GTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGA...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000538326.5
CDS-3UTR TCA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTTCAGCTCCGGAACATTaGACATTTCCATTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIISAPEH*TFPFLN
Trigger: GTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGA...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTCAGCTCCGGAACATTaGACATTTCCATTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: AMSWDTRVSYAFLICPTISAPEH*TFPFLN
Trigger: GTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGA...GATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: PSITCPRAEDRLKGPRERESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCACTGCGGAATCATCTGTaGCGTTTTCTTGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SITCPRAEDRLKGPRERALRNHL*RFLVWN
Trigger: ATTCCACACAAGAAAACGGCACAGATGATTCCGCAG...TGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCTGCGGAATCATCTGTaGCGTTTTCTTGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHLRNHL*RFLVWN
Trigger: ATTCCACACAAGAAAACGGCACAGATGATTCCGCAG...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGCCTTCTCTCTGCGTTTaGTCAGGGGCTTCCTCGACA +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQPSLCV*SGASST
Trigger: TGTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGG...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTAAGAGCAGCTGGACCTaGTTCAGGTGGCGCTTACAC +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFKSSWT*FRWRLH
Trigger: GTGTAAGCGCCACCTGAAGCAGGTCCAGCTGCTCTT...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGATTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTGAACGCAGGGTTTCTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCATTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: SERRVSVQDVSNVLQKFPFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...TGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGAAACCCTGCGTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576315.5
CDS-3UTR GCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTATGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp CCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTCTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: PLLAGGSGERWTPGTHFPLRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...AGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTCTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIILRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCCAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLAGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: VKSLRAIRQPLPLVSKSNCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...GTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTGTAGTCCACGAAGATaGCCACACGCTTGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLCSPRR*PHAWEA
Trigger: AGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACA...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCTATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIIYPNPV*LRFSRL
Trigger: AAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATA...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCTGGGAGGCGGAGGTTaGGAGCCAAGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYLGGGG*EPRLHH
Trigger: GTGGTGCAATCTTGGCTCGCAACCTCCGCCTCCCAG...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAACTGGGAGGCGGAGGTTaGGAGCCAAGATTGCACCAC +
Preference number: 4 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKLGGGG*EPRLHH
Trigger: GTGGTGCAATCTTGGCTCGCAACCTCCGCCTCCCAG...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAAGCACAAGGGAACACTaGAACAACCCCAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSSTREH*NNPRPA
Trigger: TGCTGGCCTGGGGTTGTTGCAGTGTTCCCTTGTGCT...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCAATCAGCTCCGGAACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGTGTTTCCTGAATGGCTaGCCTGTGGAGCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: PISSGTLNISISERRVSECFLNG*PVELLG
Trigger: GCCGAGGAGCTCCACAGGGCAGCCATTCAGGAAACA...CTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539145.5
CDS-3UTR CCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGAGGGTGGACAGCAGATaGTCACTAGGGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLARVDSR*SLGVLA
Trigger: GGCTAAGACCCCTAGTGACCATCTGCTGTCCACCCT...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTAGGGTGGACAGCAGATaGTCACTAGGGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFRVDSR*SLGVLA
Trigger: GGCTAAGACCCCTAGTGACCATCTGCTGTCCACCCT...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFLALWI*LRGILE
Trigger: CTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACCATCTTCACCGGCCTaGCTCTCTGGATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVPSSPA*LSGSGS
Trigger: GGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGG...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCTGCCGTTTTCTTGTGTaGAATATTCCTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFICRFLV*NIPEWL
Trigger: CAGCCATTCAGGAATATTCCACACAAGAAAACGGCA...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGACAGGTACCGTCAACTaGGTCTCCTTCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILTGTVN*VSFLGV
Trigger: CACGCCCAGGAAGGAGACCCAGTTGACGGTACCTGT...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGTGGACCTGCTTCAGGTaGCGCTTACACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQWTCFR*RLHCGR
Trigger: CCTGCCACAGTGTAAGCGCCACCTGAAGCAGGTCCA...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGGACCTGCTTCAGGTaGCGCTTACACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESWTCFR*RLHCGR
Trigger: CCTGCCACAGTGTAAGCGCCACCTGAAGCAGGTCCA...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCAGCTTCCTCTAGTTCCCATTCTGACTaGCACTCCTTGGCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QRNALAAPGSSTPAPASSSSHSD*HSLASS
Trigger: ACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACT...AGAGGAAGCTGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCTTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFLSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTTTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: ITCPRAEDRLKGPRERAALSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp ATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: MIQLSNLCGPSGSLSHLFPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...AAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCCCATGTTGGGGACTGTaGTCATTGAACATTTCCATT +
Preference number: 4 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSPCWGL*SLNISI
Trigger: AATGGAAATGTTCAATGACCACAGTCCCCAACATGG...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000541159.5
CDS-3UTR CCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTTCCAATGTCCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFSNVPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGGACATTGGA...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572244.5
CDS-3UTR TCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGT +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLDSDCR*GRWAHR
Trigger: ACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTC...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTATGGCCTTGGTGCTCCTaGCTCAGACTGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVWPWCS*LRLQMR
Trigger: CCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCA...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAATCGCTGCTCCTCCCCTaGTTTTCTCAGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQESLLLP*FSQLLQ
Trigger: CTGAAGAAGCTGAGAAAATCAGGGGAGGAGCAGCGA...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTTCGCTGCTCCTCCCCTaGTTTTCTCAGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFSLLLP*FSQLLQ
Trigger: CTGAAGAAGCTGAGAAAATCAGGGGAGGAGCAGCGA...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGTGTCATATGCCTTCCTaGTCTGCCCAACCATCTGGC +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWCHMPS*SAQPSG
Trigger: GCCAGATGGTTGGGCAGATCAGGAAGGCATATGACA...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACACAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: AQRKSSWRMYRCGIWLSHDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...ATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: SITCPRAEDRLKGPRERAESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...TGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGATTCAGTCAGGCCCCTaGCCACCCACTGGACAGATA +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLIQSGP*PPTGQI
Trigger: TATCTGTCCAGTGGGTGGTCAGGGGCCTGACTGAAT...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGATTCAGTCAGGCCCCTaGCCACCCACTGGACAGATA +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILIQSGP*PPTGQI
Trigger: TATCTGTCCAGTGGGTGGTCAGGGGCCTGACTGAAT...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGCCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATGGTGGGTGCATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYGGCIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATGCACCCACC...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACTGCACACTGGTGTTCTaGAGCTTGAACTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: GRGNAGRLVLIFLHHYHHCTLVF*SLNLNF
Trigger: GAAGTTCAAGTTCAAGCTGCAGAACACCAGTGTGCA...GTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGTGCACACTGGTGTTCTaGAGCTTGAACTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQCTLVF*SLNLNF
Trigger: GAAGTTCAAGTTCAAGCTGCAGAACACCAGTGTGCA...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTTGCACACTGGTGTTCTaGAGCTTGAACTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: AVKSLRAIRQPLPLVSKSCTLVF*SLNLNF
Trigger: GAAGTTCAAGTTCAAGCTGCAGAACACCAGTGTGCA...AGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCACTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAACTGCGGAATCATCTGTaGCGTTTTCTTGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: TDSQRSCVLPSITCPRAELRNHL*RFLVWN
Trigger: ATTCCACACAAGAAAACGGCACAGATGATTCCGCAG...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR GCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACAGGGAGCTGGACGCTaGGGAATCATCTGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVQGAGR*GIICAV
Trigger: AACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTG...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAGAATTTCTGGATTTaGGGGCGCCTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQENFWI*GRLLPC
Trigger: ACAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTC...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGAGAATTTCTGGATTTaGGGGCGCCTTCTCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPENFWI*GRLLPC
Trigger: ACAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTC...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGTTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLAFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTTGCTCCAGCTTCCTCTaGACCCGCTGCTTCAGCGCT +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFCSSFL*TRCFSA
Trigger: AGCGCTGAAGCAGCGGGTGCAGAGGAAGCTGGAGCA...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCTACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCATACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AQRKSSWRMYRCGIWLSHTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...ATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp GCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: AGRGNAGRLVLIFLHHYHLRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...GTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp TCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCACTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: SITCPRAEDRLKGPRERALRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...TGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp TCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLSPPSSHSLATESCSLSHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...GGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCAGCTTCCTCTTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: QRNALAAPGSSTPAPASSCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...AGAGGAAGCTGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRGNAGRLVLIFLHHYHHSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...GTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRAIRQPLPLVSKSNTLQSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...CTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQISCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFIHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCAACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LAGGSGERWTPGTHFPSSTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...TGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCTATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGYPNPV*LRFSRL
Trigger: AAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATA...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTTCAGCTCCGGAACTTTaGTCCAGGTGTTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: AVKSLRAIRQPLPLVSKSSAPEL*SRCLVF
Trigger: AAAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGA...AGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGAGGGTGGACAGCAGATaGTCACTAGGGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILRVDSR*SLGVLA
Trigger: GGCTAAGACCCCTAGTGACCATCTGCTGTCCACCCT...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTTCGTTCCCCTCGGGGTaGTCTGGAGTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFSFPSG*SGVFRL
Trigger: GAGCCTGAAGACTCCAGACCACCCCGAGGGGAACGA...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CAAAGAAATGCTCTTGCTGCTCCAGGAAGTAGTACACCTGCTCCAGCTTCCTCTAGTCAGGAGAATTTCTaGATTTGCGGGCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QRNALAAPGSSTPAPASSSQENF*ICGRLL
Trigger: GAGAAGGCGCCCGCAAATCCAGAAATTCTCCTGACT...AGAGGAAGCTGGAGCAGGTGTACTACTTCCTGGAGCAGCAAGAGCATTTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR CCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGGTGACCGAATGTTCTaGATTTCCAGGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRGDRMF*ISRAFL
Trigger: AAGGAAGGCCCTGGAAATCCAGAACATTCGGTCACC...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTAACAGGTACCGTCAACTaGGTCTCCTTCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVTGTVN*VSFLGV
Trigger: CACGCCCAGGAAGGAGACCCAGTTGACGGTACCTGT...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTATGGACCTGCTTCAGGTaGCGCTTACACTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVWTCFR*RLHCGR
Trigger: CCTGCCACAGTGTAAGCGCCACCTGAAGCAGGTCCA...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATATCTGCCCAACCATCTaGCCCACGTCCTCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYICPTI*PTSSSE
Trigger: CTCACTGGAGGACGTGGGCCAGATGGTTGGGCAGAT...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp GTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: VRGAVFFPPSRVPGLKIGTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...ACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp AACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NNDTAVKSLRAIRQPLPLSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...AAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCAGCTCCGGAACTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCATTCTTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SAPELCKMSPMSCRSSHSSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...AGAATGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGTTCCGGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
CDS-3UTR CCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: ETRRAQNNDTAVKSLRAIRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...GATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: MIQLSNLCGPSGSLSHLFRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...AAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: SLSPPSSHSLATESCSLSRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...GGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEIYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFIYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAACCCCTGACCACCCACTaGACAGATAGTCAGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKPLTTH*TDSQRS
Trigger: GCTCCTCTGACTATCTGTCCAGTGGGTGGTCAGGGG...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGAGAGAGATGCAGTGTTaGGCATTCAGTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQREMQC*AFSQAP
Trigger: AGGGGCCTGACTGAATGCCCAACACTGCATCTCTCT...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAAAGAGAGATGCAGTGTTaGGCATTCAGTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQEREMQC*AFSQAP
Trigger: AGGGGCCTGACTGAATGCCCAACACTGCATCTCTCT...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCAGAGAGATGCAGTGTTaGGCATTCAGTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGREMQC*AFSQAP
Trigger: AGGGGCCTGACTGAATGCCCAACACTGCATCTCTCT...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGACCCCATATCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLTPYPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGATATGGGGT...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339854.8
CDS-3UTR TCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCTTCCCCATAGTAGGTaGCCAGCAGAGTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYLPHSR*PAEWPS
Trigger: AGATGGCCACTCTGCTGGTCACCTACTATGGGGAAG...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAACTGGTGGCCTTCCGGTaGCCGAATGTTCTGGATTTC +
Preference number: 4 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKLVAFR*PNVLDF
Trigger: GAAATCCAGAACATTCGGTCACCGGAAGGCCACCAG...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537682.5
ENST00000538326.5
CDS-3UTR TCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTTGGCCTTGGTGCTCCTaGCTCAGACTGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFWPWCS*LRLQMR
Trigger: CCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCA...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTCGCTGCTCCTCCCCTaGTTTTCTCAGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILSLLLP*FSQLLQ
Trigger: CTGAAGAAGCTGAGAAAATCAGGGGAGGAGCAGCGA...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACATCGCTGCTCCTCCCCTaGTTTTCTCAGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATSLLLP*FSQLLQ
Trigger: CTGAAGAAGCTGAGAAAATCAGGGGAGGAGCAGCGA...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR TCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTGCCCACGTCCTCCAGTaGGGCCACAAAGAAATGCTC +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFAHVLQ*GHKEML
Trigger: GAGCATTTCTTTGTGGCCTCACTGGAGGACGTGGGC...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCACTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR TCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTATTAACAGCATGTGCCTaGGCGCCAATCAGCTCCGGA +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVLTACA*APISSG
Trigger: TCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAA...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: RGVLRENEGQIFCSGAPEESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: PRTMIQLSNLCGPSGSLSESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...GGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGCTCCGGAACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGAAGTACGGGCTGAAGATAGGTTaGAGGGGCCCAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SSGTLNISISERRVSEKYGLKIG*RGPEKE
Trigger: CTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCC...GTACTTCTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGTTCCGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
CDS-3UTR TCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAACCGTACTTCCTCCTCTaGAATCCATGGTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQEPYFLL*NPWCVI
Trigger: GATGACACACCATGGATTTCAGAGGAGGAAGTACGG...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAACTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKLECSF*TLVFCS
Trigger: GCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAG...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp ACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGAAGTACTTTGTGCTCACCTGCAGGGTGAGCTaGACGGCGTACTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLNISISERRVSEKYFVLTCRVS*TAYSSP
Trigger: TGGGGAAGAGTACGCCGTGCAGCTCACCCTGCAGGT...GAGCACAAAGTACTTCTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
CDS-3UTR GCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTAAAGAGCAGCTGGACCTaGTTCAGGTGGCGCTTACAC +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVKSSWT*FRWRLH
Trigger: GTGTAAGCGCCACCTGAAGCAGGTCCAGCTGCTCTT...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGTTCCTCTGCACCCGCTaGTTCAGCGCTTCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQFLCTR*FSASVC
Trigger: ACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAA...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGGAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCAACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: RKLGEPRTMIQLSNLCGPTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...TGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGCTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKLRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAACACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQEHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAACAGCTGTCAAATCTTTaGGGGCCATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKQLSNL*GPSGSL
Trigger: GAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTG...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGGGGGACATATATCCTTaGCGTGGGGTTCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLGDIYP*RGVLRE
Trigger: TTCCCTCAGAACCCCACGGCAAGGATATATGTCCCC...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCAGGGGACATATATCCTTaGCGTGGGGTTCTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESGDIYP*RGVLRE
Trigger: TTCCCTCAGAACCCCACGGCAAGGATATATGTCCCC...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCTATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: VLRENEGQIFCSGAPESAYPNPV*LRFSRL
Trigger: AAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATA...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAATGGAATATTCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RHSVTIECECKIQGQKQEWNIPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGAATATTCCA...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCTGCCGTTTTCTTGTGTaGAATATTCCTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTCRFLV*NIPEWL
Trigger: CAGCCATTCAGGAATATTCCACACAAGAAAACGGCA...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp ACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGAAGTACTTTGTGCTCTCGTTCCCCTCGGGGTaGTCTGGAGTCTTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TLNISISERRVSEKYFVLSFPSG*SGVFRL
Trigger: GAGCCTGAAGACTCCAGACCACCCCGAGGGGAACGA...GAGCACAAAGTACTTCTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR CCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGGGTGACCGAATGTTCTaGATTTCCAGGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWGDRMF*ISRAFL
Trigger: AAGGAAGGCCCTGGAAATCCAGAACATTCGGTCACC...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTACAGGTACCGTCAACTaGGTCTCCTTCCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFTGTVN*VSFLGV
Trigger: CACGCCCAGGAAGGAGACCCAGTTGACGGTACCTGT...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAAGCAGGGCGATGTCCTaGGATACGCGGGTGTCATAT +
Preference number: 4 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKSRAMS*DTRVSY
Trigger: ATATGACACCCGCGTATCCCAGGACATCGCCCTGCT...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCTTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: VLRENEGQIFCSGAPESALSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTATTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: SPPSSHSLATESCSLSCLLSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AAGGGGCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: KGPRERAAGECIDVGSGCNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...ACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGCCAGTAGCCATTCTCTaGCGACAGAGTCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLPVAIL*RQSHVP
Trigger: GGGAACATGACTCTGTCGCCAGAGAATGGCTACTGG...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTTTCGGAGGCAAAGATaGGAGGATTGTTTGAGATCA +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVFRRQR*EDCLRS
Trigger: TGATCTCAAACAATCCTCCCATCTTTGCCTCCGAAA...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339854.8
ENST00000542898.5
3UTR CAA 72 bp TCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTCTTCAGATCATCAGAG +
Preference number: 4 (lower is better)
Translates to: SNLCGPSGSLSH*FPSLTLFRSSE
Trigger: CTCTGATGATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTCAGAAGTTCCCATTCTaGCTGGCACTCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFQKFPF*LALLGL
Trigger: GAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTCTG...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGCTTCTCCACAAACTCTaGCTTCTGGTGGAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLLLHKL*LLVEEL
Trigger: CAACTCCTCCACCAGAAGTCAGAGTTTGTGGAGAAG...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTATCAGCTCCGGAACATTaGACATTTCCATTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLSAPEH*TFPFLN
Trigger: GTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGA...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
ENST00000576315.5
CDS-3UTR TCA 90 bp AGGCACTGTCTTAGCCCTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCAGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: RHCLSPVQDVSNVLQKFPESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...TGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGGGCTAAGACAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
CDS-3UTR GCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACTGCGGAATCATCTGTaGCGTTTTCTTGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRLRNHL*RFLVWN
Trigger: ATTCCACACAAGAAAACGGCACAGATGATTCCGCAG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGTTTCAGAAAGCTCACTaGCTTCTCCTCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQFQKAH*LLLPIG
Trigger: TCCTATGGGGAGGAGAAGGCAGTGAGCTTTCTGAAA...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTATACGCGGGTGTCATATaGCTTCCTGATCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVYAGVI*LPDLPN
Trigger: GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTA...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCACACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTCACATTAACAGCATGTaGCTGAGCGCCAATCAGCTC +
Preference number: 4 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSHINSM*LSANQL
Trigger: GAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTG...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SGERWTPGTHFPSSLSPPTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...GGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTAACCAGGGGCGGATTATaGAACGACTCCGTACTTCCT +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVTRGGL*NDSVLP
Trigger: AGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGT...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTAGGGTGGACAGCAGATaGTCACTAGGGGTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFRVDSR*SLGVLA
Trigger: GGCTAAGACCCCTAGTGACCATCTGCTGTCCACCCT...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGTGGAATATTCCTGAATaGCTGCCCTGTGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQWNIPE*LPCGAP
Trigger: AGGAGCTCCACAGGGCAGCCATTCAGGAATATTCCA...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp TCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATAGTCAGGAGAATTTCTaGATTTGCGGGCGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLGFPYPQDRSRENKGTYSQENF*ICGRLL
Trigger: GAGAAGGCGCCCGCAAATCCAGAAATTCTCCTGACT...ATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTGGTGACCGAATGTTCTaGATTTCCAGGGCCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WTPGTHFPSSLSPPSSHSGDRMF*ISRAFL
Trigger: AAGGAAGGCCCTGGAAATCCAGAACATTCGGTCACC...AGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp AGGAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: RKLGEPRTMIQLSNLCGPLSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...TGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp CAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCAACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: QNNDTAVKSLRAIRQPLPTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...TGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGTCCCTTTCCTGCTTATaGATGTCTTGCAGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLSLSCL*MSCRLP
Trigger: TGGGAGCCTGCAAGACATCCATAAGCAGGAAAGGGA...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCAGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: WTPGTHFPSSLSPPSSHSGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...AGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCTAACACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCGGAACGCTGGACGCCTaGTACTCATTTTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SNTLQIIREDEVGVSGFCGTLDA*YSFSFI
Trigger: GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCC...GCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGTGTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCAAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAATATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: TDSQRSCVLPSITCPRAEYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: AVKSLRAIRQPLPLVSKSYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...AGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATAGAGAGATGCAGTGTTaGGCATTCAGTCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYREMQC*AFSQAP
Trigger: AGGGGCCTGACTGAATGCCCAACACTGCATCTCTCT...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp ATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTTCAGCTCCGGAACATTaGACATTTCCATTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: MIQLSNLCGPSGSLSHLFSAPEH*TFPFLN
Trigger: GTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGA...AAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGATCATCAGAGAAGATaGGGTTGGGGTAAGCGGTTT +
Preference number: 4 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATDHQRR*GWGKRF
Trigger: AAACCGCTTACCCCAACCTCATCTTCTCTGATGATC...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp GAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: ETRRAQNNDTAVKSLRAIESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...GATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGCTGCGGAATCATCTGTaGCGTTTTCTTGTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLLRNHL*RFLVWN
Trigger: ATTCCACACAAGAAAACGGCACAGATGATTCCGCAG...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGTTTCAGAAAGCTCACTaGCTTCTCCTCCCCATAGGA +
Preference number: 4 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRFQKAH*LLLPIG
Trigger: TCCTATGGGGAGGAGAAGGCAGTGAGCTTTCTGAAA...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLAMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCAACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESTVLAL*KMSPMS
Trigger: GGACATTGGAGACATCTTGCACAGGGCTAAGACAGT...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp AGGAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCACTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RKLGEPRTMIQLSNLCGPLRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...TGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR GCA 90 bp ACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGAAGTACTTTGTGCTCGGCTCCCAGGATCCATaGTGTCTTGTCTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: TLNISISERRVSEKYFVLGSQDP*CLVSNL
Trigger: GAGGTTGGAGACAAGACAGCATGGATCCTGGGAGCC...GAGCACAAAGTACTTCTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
CDS-3UTR GCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTACATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATTGCCGTTTTCTTGTGTaGAATATTCCTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHCRFLV*NIPEWL
Trigger: CAGCCATTCAGGAATATTCCACACAAGAAAACGGCA...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CAGAATCACATTAACAGCATGTGCCTGAGCGCCAATCAGCTCCGGAACATTGAATTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: QNHINSMCLSANQLRNIELSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...TTCAATGTTCCGGAGCTGATTGGCGCTCAGGCACATGCTGTTAATGTGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
CDS-3UTR CCA 90 bp AGGAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCAACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: RKLGEPRTMIQLSNLCGPTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...TGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTAAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp ATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATAGATGCCCACACGCTTaGGAGGCTCCTTTATTAGCA +
Preference number: 4 (lower is better)
Translates to: IFLHHYHHPVAILWRQSHRCPHA*EAPLLA
Trigger: TGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCT...ATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CCA 90 bp GCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTATAGATGTGGGATCTaGCTGTCACATTGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: AQRKSSWRMYRCGIWLSHYRCGI*LSHCKR
Trigger: CCTTTTACAATGTGACAGCCAGATCCCACATCTATA...ATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR TCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGTCAGCTCCGGAACATTaGACATTTCCATTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLSAPEH*TFPFLN
Trigger: GTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGA...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000538326.5
CDS-3UTR TCA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLAESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGCTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQLRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCTGAGAAGTACTTTGTaGTCTTCTCCACAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFLRSTL*SSPQTL
Trigger: CAGAGTTTGTGGAGAAGAGCACAAAGTACTTCTCAG...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTTGCTTATGGATGTCTTaGAGGCTCCCAGGATCCATG +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFCLWMS*RLPGSM
Trigger: CATGGATCCTGGGAGCCTGCAAGACATCCATAAGCA...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTTCATGTTCCCTTTCCTaGTTATGGATGTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: WTPGTHFPSSLSPPSSHSSCSLS*LWMSCR
Trigger: CCTGCAAGACATCCATAAGCAGGAAAGGGAACATGA...AGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTATCCCAATCCAGTCTaGTTGCGTTTCTCTAGGCTT +
Preference number: 4 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSYPNPV*LRFSRL
Trigger: AAGCCTAGAGAAACGCAAGCAGACTGGATTGGGATA...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILLSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp TTTTATCTCTTGAGGAGTGGTCCACTTTTCAGGGACAGGCACTGTCTTAGCCCTAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: FYLLRSGPLFRDRHCLSPNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...AGGGCTAAGACAGTGCCTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
CDS-3UTR CCA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: SSLSPPSSHSLATESCSLNSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGAACTCTGACTTCTGGTaGAGGAGTTGGATCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLANSDFW*RSWIFC
Trigger: ACAAAAGATCCAACTCCTCCACCAGAAGTCAGAGTT...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CCA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: FIHEAQSILLRIMARHGGTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR TCA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCAGAGAGCCCAGAACAATaGTACAGCTGTCAAATCTTT +
Preference number: 4 (lower is better)
Translates to: HFPSSLSPPSSHSLATESESPEQ*YSCQIF
Trigger: AAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTC...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATTGCACACTGGTGTTCTaGAGCTTGAACTTGAACTTC +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYCTLVF*SLNLNF
Trigger: GAAGTTCAAGTTCAAGCTGCAGAACACCAGTGTGCA...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp ATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATATGTCTCCAATGTCCTaGAGAAGTTCCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: IFLHHYHHPVAILWRQSHMSPMS*RSSHSD
Trigger: GTCAGAATGGGAACTTCTGCAGGACATTGGAGACAT...ATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: PGTHFPSSLSPPSSHSLAHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...CGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR GCA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR GCA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGACTATTGAGTGTGAATaGAAGATACAAGGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRHSVTIECECKIQGQKQTIECE*KIQGQK
Trigger: CTTCTGGCCTTGTATCTTGCATTCACACTCAATAGT...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGTGCCGTTTTCTTGTGTaGAATATTCCTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRCRFLV*NIPEWL
Trigger: CAGCCATTCAGGAATATTCCACACAAGAAAACGGCA...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CCA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTATTATCTCTTGAGGAGTaGTCCACTTTTCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVLSLEE*STFQGQ
Trigger: CTGTCCCTGAAAAGTGGACCACTCCTCAAGAGATAA...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGACAAACTCTGACTTCTaGTGGAGGAGTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLTNSDF*WRSWIF
Trigger: AAAGATCCAACTCCTCCACCAGAAGTCAGAGTTTGT...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CCA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGTTTCGGAGGCAAAGATaGGAGGATTGTTTGAGATCA +
Preference number: 4 (lower is better)
Translates to: ASHILKTEAERTRGHISLFRRQR*EDCLRS
Trigger: TGATCTCAAACAATCCTCCCATCTTTGCCTCCGAAA...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339854.8
ENST00000542898.5
CDS-3UTR GCA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTTCAGCTCCGGAACTTTaGTCCAGGTGTTTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFSAPEL*SRCLVF
Trigger: AAAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGA...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR GCA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCATTGTAAAAGGAGATaGTTCCAACTCTGTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SRLPISSRQKQREQGDIYHCKRR*FQLCSP
Trigger: TGGACTACAGAGTTGGAAGCATCTCCTTTTACAATG...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS CCA 90 bp GGCTGGGGGCTTAGGCTTCCCGGGCTCTTCCTTTCATGGGAGTCCTaGCACCGGGGGCAGCCAGGTGAGCGGCTGCCTGAGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: GWGLRLPGLFLSWES*HRGQPGERLPEAWG
Trigger: CCCCCAGGCCTCAGGCAGCCGCTCACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCCGGGAAGCCTAAGCCCCCAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS CCA 90 bp TGCCTCGGGGAAGCTGCAGGAATCACGCACACAGGTACCGTCAACTaGGTCTCCTTCCTGGGCGTGGCAGCGGGGACTCGCAGCCGTGTC +
Preference number: 5 (lower is better)
Translates to: CLGEAAGITHTGTVN*VSFLGVAAGTRSRV
Trigger: GACACGGCTGCGAGTCCCCGCTGCCACGCCCAGGAAGGAGACCCAGTTGACGGTACCTGTGTGCGTGATTCCTGCAGCTTCCCCGAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS CCA 90 bp TTCCAGGGCCTTCCTTCAGGTCCGCAGATGCCCCTCCATCCGGAGTaGGCCTTGCCCGGGGTTCTGTTGCCGAGTCCAGATTCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: FQGLPSGPQMPLHPE*ALPGVLLPSPDSQL
Trigger: CAGCTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAGGAAGGCCCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 90 bp AGCAGCTGGACCTGCTTCAGGTGGCGCTTACACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGGCTCTTCCTTTCATGGGAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSWTCFRWRLHCGRG*GLRLPGLFLSWESW
Trigger: CCAGGACTCCCATGAAAGGAAGAGCCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTGTAAGCGCCACCTGAAGCAGGTCCAGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTCAGATCCTCCGGGTCCGAGGCTaGCCCTGCGCGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RAIRQPLPLVSKSNTLQILRVRG*PCASRP
Trigger: GGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGAG...GATCTGAAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGCTCCGGGTCCGAGGCTaGCCCTGCGCGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVLRVRG*PCASRP
Trigger: GGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGAG...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCCGGGTCCGAGGCTaGCCCTGCGCGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSLRVRG*PCASRP
Trigger: GGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGAG...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACCATCCGGAGTGGGCCTaGCCCGGGGTTCTGTTGCCG +
Preference number: 5 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDHPEWA*PGVLLP
Trigger: CGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATG...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACT +
Preference number: 5 (lower is better)
Translates to: KMPTRLGGSFISRRVGGTAHPVA*VLLTQT
Trigger: AGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGC...CGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS GCA 90 bp GACCGAATGTTCTGGATTTCCAGGGCCTTCCTTCAGGTCCGCAGATaGCCCTCCATCCGGAGTGGGCCTTGCCCGGGGTTCTGTTGCCGA +
Preference number: 5 (lower is better)
Translates to: DRMFWISRAFLQVRR*PSIRSGPCPGFCCR
Trigger: TCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAGGAAGGCCCTGGAAATCCAGAACATTCGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 90 bp GTGACCAGCAGAGTGGCCATCTTCACCGGCCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAGTGCTCCTTCTGCACACTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: VTSRVAIFTGLALWI*LRGILECSFCTLVF
Trigger: GAACACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGGCCACTCTGCTGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCTCCGGGTCCGAGGCTaGCCCTGCGCGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRLRVRG*PCASRP
Trigger: GGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGAG...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACCATCCGGAGTGGGCCTaGCCCGGGGTTCTGTTGCCG +
Preference number: 5 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNHPEWA*PGVLLP
Trigger: CGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATG...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: CPHAWEAPLLAGGSGERWSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...CCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS TCA 90 bp TGGGGCGCACCCGGTGGCCTTGGTGCTCCTGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGTGATCCTCACAGAAGAGCAGCTGGA +
Preference number: 5 (lower is better)
Translates to: WGAPGGLGAPDSDCR*GRWAHRDPHRRAAG
Trigger: TCCAGCTGCTCTTCTGTGAGGATCACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACTTCAGGCTCCTGGGCTaGTTCTCCCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: QGDVLGYAGVICLPDLPNFRLLG*FSPREL
Trigger: CAGCTCCCTGGGGGAGAACAAGCCCAGGAGCCTGAA...GTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: CPHAWEAPLLAGGSGERWRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...CCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATTCAGGCTCCTGGGCTaGTTCTCCCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLFRLLG*FSPREL
Trigger: CAGCTCCCTGGGGGAGAACAAGCCCAGGAGCCTGAA...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp GCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCAACCATCTTCAGGCTCCTGGGCTaGTTCTCCCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: AMSWDTRVSYAFLICPTIFRLLG*FSPREL
Trigger: CAGCTCCCTGGGGGAGAACAAGCCCAGGAGCCTGAA...GATGGTTGGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACT +
Preference number: 5 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFAHPVA*VLLTQT
Trigger: AGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGC...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GAGCAGGGCGATGTCCTGGGATACGCGGGTGTCATATGCCTTCCTGATCTGCCCTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: EQGDVLGYAGVICLPDLPSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...GGGCAGATCAGGAAGGCATATGACACCCGCGTATCCCAGGACATCGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: WEAPLLAGGSGERWTPGTRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...AGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS TCA 90 bp CCAGGAGTGGTGGCATGTGCCTACAGTCCCAGCAACTCGGGAGGCTaGGGCAGGAGAATTGCTTCAACTGGGGAGGCGAAGGTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: PGVVACAYSPSNSGG*GRRIASTGEAKVCS
Trigger: ACTGCAAACCTTCGCCTCCCCAGTTGAAGCAATTCTCCTGCCTCAGCCTCCCGAGTTGCTGGGACTGTAGGCACATGCCACCACTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS GCA 90 bp GGAACATCTCCCTCCCAGGTCCCTTCTGGGACTGTCTCCCCCATATaGTTTCTGCAAGACACCCCAGGGTACACCACAGGACCTCGCTGT +
Preference number: 5 (lower is better)
Translates to: GTSPSQVPSGTVSPI*FLQDTPGYTTGPRC
Trigger: ACAGCGAGGTCCTGTGGTGTACCCTGGGGTGTCTTGCAGAAAGCATATGGGGGAGACAGTCCCAGAAGGGACCTGGGAGGGAGATGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS CCA 90 bp TGTGGGTGGACGTGGATGTCCAGGAACCCCCAGAAGCCCACCTCCTaGAGGTGGATAAGAGGTGGGCTTATGCTGCCTCTTCAAGGCCTA +
Preference number: 5 (lower is better)
Translates to: CGWTWMSRNPQKPTS*RWIRGGLMLPLQGL
Trigger: TAGGCCTTGAAGAGGCAGCATAAGCCCACCTCTTATCCACCTCCAGGAGGTGGGCTTCTGGGGGTTCCTGGACATCCACGTCCACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS-3UTR CAA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGCTCCGGGTCCGAGGCTaGCCCTGCGCGTCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: ASHILKTEAERTRGHISLLRVRG*PCASRP
Trigger: GGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGAG...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTACATCCGGAGTGGGCCTaGCCCGGGGTTCTGTTGCCG +
Preference number: 5 (lower is better)
Translates to: SPPSSHSLATESCSLSCLHPEWA*PGVLLP
Trigger: CGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATG...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACT +
Preference number: 5 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVAHPVA*VLLTQT
Trigger: AGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGC...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GGAGGCTCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCACTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: GGSFISRRVGGTLDAWYSLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...TGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGAGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CTCCAGTTCCCCAATCAGCGCATCGAGCAGGGCGATGTCCTGGGATACGCGGGTCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: LQFPNQRIEQGDVLGYAGLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...ACCCGCGTATCCCAGGACATCGCCCTGCTCGATGCGCTGATTGGGGAACTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGACCTGAGGTCAGGAGTTaGAGACCGGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: PSITCPRAEDRLKGPRERPEVRS*RPAWPT
Trigger: TGTTGGCCAGGCCGGTCTCAAACTCCTGACCTCAGG...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS GCA 90 bp TTCACCGGCCTGGCTCTCTGGATCTGGCTCCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTGTTCTGCAGCTTGAACTTGAACTTC +
Preference number: 5 (lower is better)
Translates to: FTGLALWIWLRGILE*SFCTLVFCSLNLNF
Trigger: GAAGTTCAAGTTCAAGCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATTTCAGGCTCCTGGGCTaGTTCTCCCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDFRLLG*FSPREL
Trigger: CAGCTCCCTGGGGGAGAACAAGCCCAGGAGCCTGAA...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCGGAGAATTTCTGGATTaGCGGGCGCCTTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFIGEFLD*RAPSPL
Trigger: CAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTCC...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTTTGCCCGGGGTTCTGTaGCCGAGTCCAGATTCGCAG +
Preference number: 5 (lower is better)
Translates to: ITCPRAEDRLKGPRERAALPGVL*PSPDSQ
Trigger: CTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAA...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACT +
Preference number: 5 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLAHPVA*VLLTQT
Trigger: AGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGC...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCTTCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: SSVQEHLRVPPTRGGLCNSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...GTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: ATHQGRIMQRLRTSSSEISDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...GATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: VQEHLRVPPTRGGLCNDSGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...GGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: APESATHQGRIMQRLRTSKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: STKMPTRLGGSFISRRVGRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCTTCAGGCTCCTGGGCTaGTTCTCCCCCAGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: VLRENEGQIFCSGAPESAFRLLG*FSPREL
Trigger: CAGCTCCCTGGGGGAGAACAAGCCCAGGAGCCTGAA...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGGCCTTCTCTCTGCGTTaGCTCAGGGGCTTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVAFSLR*LRGFLD
Trigger: GTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGGC...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGGAGAATTTCTGGATTaGCGGGCGCCTTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: SITCPRAEDRLKGPRERAGEFLD*RAPSPL
Trigger: CAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTCC...TGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCCATCCGGAGTGGGCCTaGCCCGGGGTTCTGTTGCCG +
Preference number: 5 (lower is better)
Translates to: FIHEAQSILLRIMARHGGHPEWA*PGVLLP
Trigger: CGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATG...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTCATCCGGAGTGGGCCTaGCCCGGGGTTCTGTTGCCG +
Preference number: 5 (lower is better)
Translates to: SSLSPPSSHSLATESCSLHPEWA*PGVLLP
Trigger: CGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATG...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: ITCPRAEDRLKGPRERAASDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIISDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: PSITCPRAEDRLKGPRERTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TCTGTTCAGGAGCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: SVQEHLRVPPTRGGLCNDKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...GTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGCTCCTGAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GGAGATGCTTCCAACTCTGTAGTCCACGAAGATGCCCACACGCTTGGGAGGCTCAAGAGAGATGCAGTGTaGGGCATTCAGTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: GDASNSVVHEDAHTLGRLKRDAV*GIQSGP
Trigger: GGGGCCTGACTGAATGCCCAACACTGCATCTCTCTT...GAGCCTCCCAAGCGTGTGGGCATCTTCGTGGACTACAGAGTTGGAAGCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGCCTGAGGTCAGGAGTTaGAGACCGGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: RGVLRENEGQIFCSGAPEPEVRS*RPAWPT
Trigger: TGTTGGCCAGGCCGGTCTCAAACTCCTGACCTCAGG...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTGAGGTCAGGAGTTaGAGACCGGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQPEVRS*RPAWPT
Trigger: TGTTGGCCAGGCCGGTCTCAAACTCCTGACCTCAGG...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAACCTGAGGTCAGGAGTTaGAGACCGGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: TDSQRSCVLPSITCPRAEPEVRS*RPAWPT
Trigger: TGTTGGCCAGGCCGGTCTCAAACTCCTGACCTCAGG...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS GCA 90 bp CTGGCTCTCTGGATCTGGCTCCGGGGGATCCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGCTTGAACTTGAACTTCTCGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LALWIWLRGILECSF*TLVFCSLNLNFSKS
Trigger: TGACTTCGAGAAGTTCAAGTTCAAGCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS GCA 90 bp TGGGCTTGTTCTCCCCCAGGGAGCTGGACGCTGCGGAATCATCTGTaGCGTTTTCTTGTGTGGAATATTCCTGAATGGCTGCCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: WACSPPGSWTLRNHL*RFLVWNIPEWLPCG
Trigger: TCCACAGGGCAGCCATTCAGGAATATTCCACACAAGAAAACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGAACAAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 90 bp GGTCTGGAGTCTTCAGGCTCCTGGGCTTGTTCTCCCCCAGGGAGCTaGACGCTGCGGAATCATCTGTGCCGTTTTCTTGTGTGGAATATT +
Preference number: 5 (lower is better)
Translates to: GLESSGSWACSPPGS*TLRNHLCRFLVWNI
Trigger: AATATTCCACACAAGAAAACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGAACAAGCCCAGGAGCCTGAAGACTCCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TCCACGAAGATGCCCACACGCTTGGGAGGCTCCTTTATTAGCAGGCGGGTCGGGCTGGTGTTCTGCAGCTaGAACTTGAACTTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: STKMPTRLGGSFISRRVGLVFCS*NLNFSK
Trigger: CTTCGAGAAGTTCAAGTTCAAGCTGCAGAACACCAG...CCCGACCCGCCTGCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTTCGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACGCCTTCTCTCTGCGTTaGCTCAGGGGCTTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: VKSLRAIRQPLPLVSKSNAFSLR*LRGFLD
Trigger: GTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGGC...GTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGGGAGAATTTCTGGATTaGCGGGCGCCTTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQGEFLD*RAPSPL
Trigger: CAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTCC...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTTTGCCCGGGGTTCTGTaGCCGAGTCCAGATTCGCAG +
Preference number: 5 (lower is better)
Translates to: SLRAIRQPLPLVSKSNTLLPGVL*PSPDSQ
Trigger: CTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAA...AAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACT +
Preference number: 5 (lower is better)
Translates to: SVLPPLKSMVCHQYMSSPAHPVA*VLLTQT
Trigger: AGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGC...GGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: PSITCPRAEDRLKGPRERGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: GQIVRGAVFFPPSRVPGLGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...CAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCAGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: LAGGSGERWTPGTHFPSSGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...TGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SITCPRAEDRLKGPRERATAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...TGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GAAGTTCCCATTCTGACTGGCACTCCTTGGCCTCCAGTTCCCCAATCAGCGCATAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: EVPILTGTPWPPVPQSAHRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...ATGCGCTGATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TCCTTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: SFISRRVGGTLDAWYSFSKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...GGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGAAGAGAGATGCAGTGTaGGGCATTCAGTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGKRDAV*GIQSGP
Trigger: GGGGCCTGACTGAATGCCCAACACTGCATCTCTCTT...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GCACCTGAGAGTGCCACCCACCAGGGGCGGATTATGCAACGACTCCGTACTTCCAGATGGGAGGATTGTTaGAGATCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: APESATHQGRIMQRLRTSRWEDC*RSGVRD
Trigger: GTCTCGAACTCCTGATCTCAAACAATCCTCCCATCT...GGAAGTACGGAGTCGTTGCATAATCCGCCCCTGGTGGGTGGCACTCTCAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339854.8
ENST00000542898.5
CDS-3UTR CAA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTACTTCAGCGCTTCAGTTaGTTTCCTGAATGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLLQRFS*FPEWLP
Trigger: GGGCAGCCATTCAGGAAACAAACTGAAGCGCTGAAG...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS GCA 90 bp TGTCTTCTAAATAGGGCCCCTCAAGTCAACAGCACAAGGGAACACTaGAACAACCCCAGGCCAGCACACACCATTACCGCTGGACTCACC +
Preference number: 5 (lower is better)
Translates to: CLLNRAPQVNSTREH*NNPRPAHTITAGLT
Trigger: GGTGAGTCCAGCGGTAATGGTGTGTGCTGGCCTGGGGTTGTTGCAGTGTTCCCTTGTGCTGTTGACTTGAGGGGCCCTATTTAGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTTTGCCCGGGGTTCTGTaGCCGAGTCCAGATTCGCAG +
Preference number: 5 (lower is better)
Translates to: NNDTAVKSLRAIRQPLPLLPGVL*PSPDSQ
Trigger: CTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAA...AAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp TCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACT +
Preference number: 5 (lower is better)
Translates to: SLGFPYPQDRSRENKGTYAHPVA*VLLTQT
Trigger: AGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGC...ATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCTGCTTATCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: SPPSSHSLATESCSLSCLSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...TAAGCAGGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: RVGGTLDAWYSFSFIIITGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...GGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RGVLRENEGQIFCSGAPERIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: ITCPRAEDRLKGPRERAALLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: HWTDSQRSCVLPSITCPRLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...CCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: ITCPRAEDRLKGPRERAAKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: SQRSCVLPSITCPRAEDRKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...CCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: RRVGGTLDAWYSFSFIIIKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...GATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SITCPRAEDRLKGPRERARAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...TGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: QIVRGAVFFPPSRVPGLKRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...CTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGTGGGGTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGCCCAATCCAGTCTGCTaGCGTTTCTCTAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: RGVLRENEGQIFCSGAPEPNPVC*RFSRLP
Trigger: GGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGG...CTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAACCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCCCCAATCCAGTCTGCTaGCGTTTCTCTAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SGERWTPGTHFPSSLSPPPNPVC*RFSRLP
Trigger: GGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGG...GGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCCCCAATCCAGTCTGCTaGCGTTTCTCTAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGPNPVC*RFSRLP
Trigger: GGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGG...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACCTGAGGTCAGGAGTTaGAGACCGGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRPEVRS*RPAWPT
Trigger: TGTTGGCCAGGCCGGTCTCAAACTCCTGACCTCAGG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCCTGAGGTCAGGAGTTaGAGACCGGCCTGGCCAACA +
Preference number: 5 (lower is better)
Translates to: KSLRAIRQPLPLVSKSNTPEVRS*RPAWPT
Trigger: TGTTGGCCAGGCCGGTCTCAAACTCCTGACCTCAGG...AGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCGGAACCCAGGCCATGTaGGGGACTGTGGTCATTGAA +
Preference number: 5 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGGTQAM*GTVVIE
Trigger: TTCAATGACCACAGTCCCCAACATGGCCTGGGTTCC...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541159.5
CDS-3UTR CAA 90 bp CATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTGCCTTCTCTCTGCGTTaGCTCAGGGGCTTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: HHYHHPVAILWRQSHVPFAFSLR*LRGFLD
Trigger: GTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGGC...AAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATGGAGAATTTCTGGATTaGCGGGCGCCTTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHGEFLD*RAPSPL
Trigger: CAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTCC...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACT +
Preference number: 5 (lower is better)
Translates to: SRLPISSRQKQREQGDIYAHPVA*VLLTQT
Trigger: AGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGC...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: VLRENEGQIFCSGAPESATAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: VKSLRAIRQPLPLVSKSNTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...GTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GCCCAGAGAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: AQRKSSWRMYRCGIWLSHTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...ATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTCTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GTTCTGAGGGAAAATGAGGGCCAAATCTTCTGTTCAGGAGCACCTGAGAGTGCCAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: VLRENEGQIFCSGAPESARIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...GGCACTCTCAGGTGCTCCTGAACAGAAGATTTGGCCCTCATTTTCCCTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: SGERWTPGTHFPSSLSPPKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...GGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: GRGNAGRLVLIFLHHYHHKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...GTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SCQIFAGHQAASPTCFQVRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...GACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: RRAQNNDTAVKSLRAIRQRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...CTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCAGCTCCGGAACTTaGCTCCAGGTGTTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SRRVGGTLDAWYSFSFIIISSGT*LQVFGF
Trigger: AAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGAT...AATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTAATCAGCTCCGGAACTTaGCTCCAGGTGTTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: AGGSGERWTPGTHFPSSLISSGT*LQVFGF
Trigger: AAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGAT...TAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCAGCCTTCTCTCTGCGTTaGCTCAGGGGCTTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: HFPSSLSPPSSHSLATESAFSLR*LRGFLD
Trigger: GTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGGC...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS-3UTR CAA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGTTGCCCGGGGTTCTGTaGCCGAGTCCAGATTCGCAG +
Preference number: 5 (lower is better)
Translates to: ASHILKTEAERTRGHISLLPGVL*PSPDSQ
Trigger: CTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAA...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KSLRAIRQPLPLVSKSNTTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...AGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AGGAAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCAAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RKLGEPRTMIQLSNLCGPRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...TGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: KSLRAIRQPLPLVSKSNTRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...AGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: NNDTAVKSLRAIRQPLPLRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...AAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTTAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: SLRAIRQPLPLVSKSNTLKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...AAGAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp ACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: TRRAQNNDTAVKSLRAIRRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...CCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CCAATCAGCTCCGGAACTGTGCAAGATGTCTCCAATGTCCTGCAGAAGTTCCCAAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: PISSGTVQDVSNVLQKFPRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...TGGGAACTTCTGCAGGACATTGGAGACATCTTGCACAGTTCCGGAGCTGATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000570511.5
ENST00000574583.5
CDS-3UTR CAA 90 bp ATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGGGGCCCAGAGAAAGAGCAGCTAGATGGGAGGATTGTTaGAGATCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: ITCPRAEDRLKGPRERAARWEDC*RSGVRD
Trigger: GTCTCGAACTCCTGATCTCAAACAATCCTCCCATCT...AGCTGCTCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCTGGGACACGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542898.5
CDS-3UTR CAA 90 bp CAGGGGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGCTGGTGTTCTGCAGCTaGAACTTGAACTTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: QGRIMQRLRTSSSEIHGVLVFCS*NLNFSK
Trigger: CTTCGAGAAGTTCAAGTTCAAGCTGCAGAACACCAG...CACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATCTGGTGTTCTGCAGCTaGAACTTGAACTTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDLVFCS*NLNFSK
Trigger: CTTCGAGAAGTTCAAGTTCAAGCTGCAGAACACCAG...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTGGAGAATTTCTGGATTaGCGGGCGCCTTCTCCCCTG +
Preference number: 5 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSGEFLD*RAPSPL
Trigger: CAGGGGAGAAGGCGCCCGCAAATCCAGAAATTCTCC...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATTTGCCCGGGGTTCTGTaGCCGAGTCCAGATTCGCAG +
Preference number: 5 (lower is better)
Translates to: SRLPISSRQKQREQGDIYLPGVL*PSPDSQ
Trigger: CTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAA...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATAGGTTGAAGCTTCAGCGCTTCAGTTaGTTTCAGAAAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: RSCVLPSITCPRAEDRLKLQRFS*FQKAHC
Trigger: GCAGTGAGCTTTCTGAAACAAACTGAAGCGCTGAAG...CTTCAACCTATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGATCTTCAGCGCTTCAGTTaGTTTCAGAAAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: DSQRSCVLPSITCPRAEDLQRFS*FQKAHC
Trigger: GCAGTGAGCTTTCTGAAACAAACTGAAGCGCTGAAG...ATCTTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTTCAGCGCTTCAGTTaGTTTCAGAAAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSLQRFS*FQKAHC
Trigger: GCAGTGAGCTTTCTGAAACAAACTGAAGCGCTGAAG...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TTTATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: FISRRVGGTLDAWYSFSFHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...GAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGTCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp ATTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCCTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: ISRRVGGTLDAWYSFSFILLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...GATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: FIHEAQSILLRIMARHGGRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SSLSPPSSHSLATESCSLRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: KSLRAIRQPLPLVSKSNTLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...AGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTTCCCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: SLSPPSSHSLATESCSLSLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...GGAAAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTAACACTAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: KSLRAIRQPLPLVSKSNTKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...AGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGAAGAGAGATGCAGTGTaGGGCATTCAGTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLKRDAV*GIQSGP
Trigger: GGGGCCTGACTGAATGCCCAACACTGCATCTCTCTT...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAAAAGAGAGATGCAGTGTaGGGCATTCAGTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: RHSVTIECECKIQGQKQEKRDAV*GIQSGP
Trigger: GGGGCCTGACTGAATGCCCAACACTGCATCTCTCTT...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGAAGAGAGATGCAGTGTaGGGCATTCAGTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWKRDAV*GIQSGP
Trigger: GGGGCCTGACTGAATGCCCAACACTGCATCTCTCTT...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTGCCTTCTCTCTGCGTTaGCTCAGGGGCTTCCTCGAC +
Preference number: 5 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFAFSLR*LRGFLD
Trigger: GTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGGC...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GAAAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAATCTGACTGGCACTCCTaGGCCTCCAGTTCCCCAATC +
Preference number: 5 (lower is better)
Translates to: ERAAGECIDVGSGCHIVKSDWHS*ASSSPI
Trigger: GATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGA...TTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TTAGCAGGCGGGTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCAGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: LAGGSGERWTPGTHFPSSEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...TGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGACCCGCCTGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp ACTGGACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: TGQIVRGAVFFPPSRVPGLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...CCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp CTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCACCCGGATTGGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: LPPLKSMVCHQYMSSPGLGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...CAATCCGGGTGAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TTTATTCATGAGGCCCAGTCAATTCTCTTAAGAATCATGGCCCGGCATGGTGGCGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: FIHEAQSILLRIMARHGGGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...GCCACCATGCCGGGCCATGATTCTTAAGAGAATTGACTGGGCCTCATGAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GCGCCAATCAGCTCCGGAACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: APISSGTLNISISERRVSGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...AGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGATTGGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAACAGCTGTCAAATCTTaGCGGGCCATCAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATTAVKS*RAIRQP
Trigger: AGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGT...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCAAGGATCCATGCTGTCTaGTCTCCAACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: HFPSSLSPPSSHSLATESRIHAV*SPTSTS
Trigger: GGAGGTGGAGGTTGGAGACAAGACAGCATGGATCCT...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGAAGATGCCCACACGCTaGGGAGGCTCCTTTATTAGC +
Preference number: 5 (lower is better)
Translates to: RLVLIFLHHYHHPVAILWKMPTR*GGSFIS
Trigger: GCTAATAAAGGAGCCTCCCAAGCGTGTGGGCATCTT...CCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTCCCAATCCAGTCTGCTaGCGTTTCTCTAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: NDSVLPPLKSMVCHQYMSPNPVC*RFSRLP
Trigger: GGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGG...AGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCACCCAATCCAGTCTGCTaGCGTTTCTCTAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: HFPSSLSPPSSHSLATESPNPVC*RFSRLP
Trigger: GGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGG...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCCGCTGGACTCACCATaGAACATTTCCATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: GEPRTMIQLSNLCGPSGSPLDSP*NISISE
Trigger: TTCAGAAATGGAAATGTTCAATGGTGAGTCCAGCGG...GCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS TCA 90 bp CAACAACCCCAGGCCAGCACACACCATTACCGCTGGACTCACCATTaGACATTTCCATTTCTGAACGCAGGGTTTCTGAGAAGTACTTTG +
Preference number: 5 (lower is better)
Translates to: QQPQASTHHYRWTHH*TFPFLNAGFLRSTL
Trigger: CAAAGTACTTCTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGGTGAGTCCAGCGGTAATGGTGTGTGCTGGCCTGGGGTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTCTTCAGCGCTTCAGTTaGTTTCAGAAAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: NNDTAVKSLRAIRQPLPLLQRFS*FQKAHC
Trigger: GCAGTGAGCTTTCTGAAACAAACTGAAGCGCTGAAG...AAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000541159.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GAAGTTCCCATTCTGACTGGCACTCCTTGGCCTCCAGTTCCCCAATCAGCGCATGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: EVPILTGTPWPPVPQSAHEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...ATGCGCTGATTGGGGAACTGGAGGCCAAGGAGTGCCAGTCAGAATGGGAACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538326.5
ENST00000539145.5
CDS-3UTR CAA 90 bp GTCGGGGGAACGCTGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: VGGTLDAWYSFSFIIITTLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...GGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCAGCGTTCCCCCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp CCAATCAGCTCCGGAACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: PISSGTLNISISERRVSEGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...CTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGTTCCGGAGCTGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538326.5
ENST00000539145.5
ENST00000572244.5
CDS-3UTR CAA 90 bp TCTAACACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCCTGCTTATGGATGTCTaGCAGGCTCCCAGGATCCAT +
Preference number: 5 (lower is better)
Translates to: SNTLQIIREDEVGVSGFCLLMDV*QAPRIH
Trigger: ATGGATCCTGGGAGCCTGCAAGACATCCATAAGCAG...GCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGTGTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: ASHILKTEAERTRGHISLRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAAGGGCTGAAGATAGGTaGAAGGGGCCCAGAGAAAGA +
Preference number: 5 (lower is better)
Translates to: GTHFPSSLSPPSSHSLATRAEDR*KGPRER
Trigger: TCTTTCTCTGGGCCCCTTCAACCTATCTTCAGCCCT...TGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATAAGAGAGATGCAGTGTaGGGCATTCAGTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: SRLPISSRQKQREQGDIYKRDAV*GIQSGP
Trigger: GGGGCCTGACTGAATGCCCAACACTGCATCTCTCTT...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCCAATCCAGTCTGCTaGCGTTTCTCTAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SRLPISSRQKQREQGDIYPNPVC*RFSRLP
Trigger: GGGAAGCCTAGAGAAACGCAAGCAGACTGGATTGGG...ATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp ACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGCCGCTGGACTCACCATaGAACATTTCCATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: TMIQLSNLCGPSGSLSHLPLDSP*NISISE
Trigger: TTCAGAAATGGAAATGTTCAATGGTGAGTCCAGCGG...CAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAATCAGCTCCGGAACTTaGCTCCAGGTGTTTGGTTTT +
Preference number: 5 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRISSGT*LQVFGF
Trigger: AAAACCAAACACCTGGAGCAAAGTTCCGGAGCTGAT...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTACATGTCTTCCTGGTGTTCTGCAGCTaGAACTTGAACTTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: RLRTSSSEIHGVSSVHVFLVFCS*NLNFSK
Trigger: CTTCGAGAAGTTCAAGTTCAAGCTGCAGAACACCAG...GAAGACATGTACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGCTGGTGTTCTGCAGCTaGAACTTGAACTTCTCGAAG +
Preference number: 5 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQLVFCS*NLNFSK
Trigger: CTTCGAGAAGTTCAAGTTCAAGCTGCAGAACACCAG...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGCTTCAGCGCTTCAGTTaGTTTCAGAAAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: SRHSVTIECECKIQGQKQLQRFS*FQKAHC
Trigger: GCAGTGAGCTTTCTGAAACAAACTGAAGCGCTGAAG...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CCAGTCTGCTTGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGACACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: PVCLRFSRLPISSRQKQRHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...TCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCAAGCAGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp ACAGATAGTCAGAGGAGCTGTGTTCTTCCCTCCATCACGTGTCCCAGGGCTGAAGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: TDSQRSCVLPSITCPRAEEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...TTCAGCCCTGGGACACGTGATGGAGGGAAGAACACAGCTCCTCTGACTATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp CTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: LGEPRTMIQLSNLCGPSGEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...GCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp CAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: QNNDTAVKSLRAIRQPLPLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...TGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp CTGTCAAATCTTTGCGGGCCATCAGGCAGCCTCTCCCACTTGTTTCCAAGTCTACTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: LSNLCGPSGSLSHLFPSLLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...TAGACTTGGAAACAAGTGGGAGAGGCTGCCTGATGGCCCGCAAAGATTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp ATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCAGTAGGCAGCCTCTCCCACTaGTTTCCAAGTCTAACACTC +
Preference number: 5 (lower is better)
Translates to: IMQRLRTSSSEIHGVSSVGSLSH*FPSLTL
Trigger: GAGTGTTAGACTTGGAAACAAGTGGGAGAGGCTGCC...TACTGATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGTTATTTAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: YLCYNRVGSVGTVTILLFRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...AAATAACAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp ATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATCTTCAGCGCTTCAGTTaGTTTCCTGAATGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: IFLHHYHHPVAILWRQSHLQRFS*FPEWLP
Trigger: GGGCAGCCATTCAGGAAACAAACTGAAGCGCTGAAG...ATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539145.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CTAACTTACCTCTGCTATAATCGGGTAGGCTCCGTGGGCACAGTAACTATTTTGCTTCAGCGCTTCAGTTaGTTTCAGAAAGCTCACTGC +
Preference number: 5 (lower is better)
Translates to: LTYLCYNRVGSVGTVTILLQRFS*FQKAHC
Trigger: GCAGTGAGCTTTCTGAAACAAACTGAAGCGCTGAAG...CAAAATAGTTACTGTGCCCACGGAGCCTACCCGATTATAGCAGAGGTAAGTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AAACTCGGAGAGCCCAGAACAATGATACAGCTGTCAAATCTTTGCGGGCCATCACACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: KLGEPRTMIQLSNLCGPSHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...TGATGGCCCGCAAAGATTTGACAGCTGTATCATTGTTCTGGGCTCTCCGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp ACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCATCCAGCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: TLQIIREDEVGVSGFCIQHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...CTGGATGCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGCTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp GGCGGATTATGCAACGACTCCGTACTTCCTCCTCTGAAATCCATGGTGTGTCATCTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: GGLCNDSVLPPLKSMVCHLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...ATGACACACCATGGATTTCAGAGGAGGAAGTACGGAGTCGTTGCATAATCCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCCGGAACATTGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGAAGTACTTTAGGGGACATATATCCTaGCCGTGGGGTTCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: SGTLNISISERRVSEKYFRGHIS*PWGSEG
Trigger: TCCCTCAGAACCCCACGGCAAGGATATATGTCCCCT...AAAGTACTTCTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGTTCCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538326.5
CDS-3UTR CAA 90 bp TGGACGCCTGGTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: WTPGTHFPSSLSPPSSHSHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...AGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTACCAGGCGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp CATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCACACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: HFPSSLSPPSSHSLATESHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...TGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp GTACTCATTTTCCTTCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGCACAAAGAAATGCTCTaGCTGCTCCAGGAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: VLIFLHHYHHPVAILWRQHKEML*LLQEVV
Trigger: TACTACTTCCTGGAGCAGCAAGAGCATTTCTTTGTG...CTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGAAGGAAAATGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000574583.5
ENST00000576315.5
CDS-3UTR CAA 90 bp TGCGTTTCTCTAGGCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: CVSLGFPYPQDRSRENKGEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...CCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGCCTAGAGAAACGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AGTCGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGCTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: SRHSVTIECECKIQGQKQLLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...CTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp CGGCATTCCGTGACTATTGAGTGTGAATGCAAGATACAAGGCCAGAAGCAGGAACTTCTGGTGGAGGAGTaGGATCTTTTGTTTTATCTC +
Preference number: 5 (lower is better)
Translates to: RHSVTIECECKIQGQKQELLVEE*DLLFYL
Trigger: GAGATAAAACAAAAGATCCAACTCCTCCACCAGAAG...TTCCTGCTTCTGGCCTTGTATCTTGCATTCACACTCAATAGTCACGGAATGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp AAGAGCAGCTGGCGAATGTATAGATGTGGGATCTGGCTGTCACATTGTAAAAGGCCGCTGGACTCACCATaGAACATTTCCATTTCTGAA +
Preference number: 5 (lower is better)
Translates to: KSSWRMYRCGIWLSHCKRPLDSP*NISISE
Trigger: TTCAGAAATGGAAATGTTCAATGGTGAGTCCAGCGG...CCTTTTACAATGTGACAGCCAGATCCCACATCTATACATTCGCCAGCTGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCATCATTATCACCACCCAGTAGCCATTCTCTGGCGACAGAGTCATGTTCCCTTGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: SSLSPPSSHSLATESCSLEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...AAGGGAACATGACTCTGTCGCCAGAGAATGGCTACTGGGTGGTGATAATGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS-3UTR CAA 90 bp GCTTCCCATATCCTCAAGACAGAAGCAGAGAGAACAAGGGGACATATATCCTTGGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: ASHILKTEAERTRGHISLEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...CAAGGATATATGTCCCCTTGTTCTCTCTGCTTCTGTCTTGAGGATATGGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
CDS-3UTR CAA 90 bp TCTAACACTCTTCAGATCATCAGAGAAGATGAGGTTGGGGTAAGCGGTTTCTGCGAGGAGTTGGATCTTTaGTTTTATCTCTTGAGGAGT +
Preference number: 5 (lower is better)
Translates to: SNTLQIIREDEVGVSGFCEELDL*FYLLRS
Trigger: ACTCCTCAAGAGATAAAACAAAAGATCCAACTCCTC...GCAGAAACCGCTTACCCCAACCTCATCTTCTCTGATGATCTGAAGAGTGTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000572244.5
CDS GCA 72 bp TCCCGCCCGGCAGGGCCGGGCTCCGGGTCCGAGGCTTaGCCTGCGCGTCCAGGCCCTCCGAGGCCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: SRPAGPGSGSEA*PARPGPPRPSL
Trigger: GAGAGAAGGCCTCGGAGGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGAGCCCGGCCCTGCCGGGCGGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CAA 72 bp CTCCCGCCCGGCAGGGCCGGGCTCCGGGTCCGAGGCTaGCCCTGCGCGTCCAGGCCCTCCGAGGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LPPGRAGLRVRG*PCASRPSEAFS
Trigger: AGAGAAGGCCTCGGAGGGCCTGGACGCGCAGGGCAAGCCTCGGACCCGGAGCCCGGCCCTGCCGGGCGGGAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS GCA 72 bp TGCCCTGCGCGTCCAGGCCCTCCGAGGCCTTCTCTCTaGGTTTGCTCAGGGGCTTCCTCGACAGCCCCCTCC +
Preference number: 6 (lower is better)
Translates to: CPARPGPPRPSL*VCSGASSTAPS
Trigger: GGAGGGGGCTGTCGAGGAAGCCCCTGAGCAAACGCAGAGAGAAGGCCTCGGAGGGCCTGGACGCGCAGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 72 bp GGCTGGGGGCTTAGGCTTCCCGGGCTCTTCCTTTCATaGGAGTCCTGGCACCGGGGGCAGCCAGGTGAGCGG +
Preference number: 6 (lower is better)
Translates to: GWGLRLPGLFLS*ESWHRGQPGER
Trigger: CCGCTCACCTGGCTGCCCCCGGTGCCAGGACTCCCATGAAAGGAAGAGCCCGGGAAGCCTAAGCCCCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS GCA 72 bp CAGGTCCGCAGATGCCCCTCCATCCGGAGTGGGCCTTaGCCGGGGTTCTGTTGCCGAGTCCAGATTCGCAGC +
Preference number: 6 (lower is better)
Translates to: QVRRCPSIRSGP*PGFCCRVQIRS
Trigger: GCTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGGCATCTGCGGACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 72 bp CTGGGCGTGGCAGCGGGGACTCGCAGCCGTGTCTGGTaGCCTTCCGGTGACCGAATGTTCTGGATTTCCAGG +
Preference number: 6 (lower is better)
Translates to: LGVAAGTRSRVW*PSGDRMFWISR
Trigger: CCTGGAAATCCAGAACATTCGGTCACCGGAAGGCCACCAGACACGGCTGCGAGTCCCCGCTGCCACGCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
CDS CCA 72 bp TCACGCACACAGGTACCGTCAACTGGGTCTCCTTCCTaGGCGTGGCAGCGGGGACTCGCAGCCGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: SRTQVPSTGSPS*AWQRGLAAVSG
Trigger: ACCAGACACGGCTGCGAGTCCCCGCTGCCACGCCCAGGAAGGAGACCCAGTTGACGGTACCTGTGTGCGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS CAA 72 bp TCAGGTCCGCAGATGCCCCTCCATCCGGAGTGGGCCTaGCCCGGGGTTCTGTTGCCGAGTCCAGATTCGCAG +
Preference number: 6 (lower is better)
Translates to: SGPQMPLHPEWA*PGVLLPSPDSQ
Trigger: CTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGGCATCTGCGGACCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS GCA 72 bp TTCTGGATTTCCAGGGCCTTCCTTCAGGTCCGCAGATaGCCCTCCATCCGGAGTGGGCCTTGCCCGGGGTTC +
Preference number: 6 (lower is better)
Translates to: FWISRAFLQVRR*PSIRSGPCPGF
Trigger: GAACCCCGGGCAAGGCCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAGGAAGGCCCTGGAAATCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 72 bp ACCAGCAGAGTGGCCATCTTCACCGGCCTGGCTCTCTaGATCTGGCTCCGGGGGATCCTGGAGTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: TSRVAIFTGLAL*IWLRGILECSF
Trigger: GAAGGAGCACTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGGCCACTCTGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS CCA 72 bp CTTCCTTCAGGTCCGCAGATGCCCCTCCATCCGGAGTaGGCCTTGCCCGGGGTTCTGTTGCCGAGTCCAGAT +
Preference number: 6 (lower is better)
Translates to: LPSGPQMPLHPE*ALPGVLLPSPD
Trigger: ATCTGGACTCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 72 bp TTCCTGGGCGTGGCAGCGGGGACTCGCAGCCGTGTCTaGTGGCCTTCCGGTGACCGAATGTTCTGGATTTCC +
Preference number: 6 (lower is better)
Translates to: FLGVAAGTRSRV*WPSGDRMFWIS
Trigger: GGAAATCCAGAACATTCGGTCACCGGAAGGCCACCAGACACGGCTGCGAGTCCCCGCTGCCACGCCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
CDS CCA 72 bp CAGAGGACAGGGAGGTATGGGGGTCTGTGCTGTGGGTaGACGTGGATGTCCAGGAACCCCCAGAAGCCCACC +
Preference number: 6 (lower is better)
Translates to: QRTGRYGGLCCG*TWMSRNPQKPT
Trigger: GGTGGGCTTCTGGGGGTTCCTGGACATCCACGTCCACCCACAGCACAGACCCCCATACCTCCCTGTCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS CAA 72 bp CAGGGCGACCTCCTCAATGGGGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACTGCAGATGAGGCAGAT +
Preference number: 6 (lower is better)
Translates to: QGDLLNGAHPVA*VLLTQTADEAD
Trigger: ATCTGCCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS CAA 90 bp GGCCTTCCTTCAGGTCCGCAGATGCCCCTCCATCCGGAGTGGGCCTaGCCCGGGGTTCTGTTGCCGAGTCCAGATTCGCAGCTGTCTTTT +
Preference number: 6 (lower is better)
Translates to: GLPSGPQMPLHPEWA*PGVLLPSPDSQLSF
Trigger: AAAAGACAGCTGCGAATCTGGACTCGGCAACAGAACCCCGGGCAAGGCCCACTCCGGATGGAGGGGCATCTGCGGACCTGAAGGAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CAA 90 bp CTTGTGTTCCAGGGCGACCTCCTCAATGGGGCGCACCCGGTGGCCTaGGTGCTCCTGACTCAGACTGCAGATGAGGCAGATGGGCTCATC +
Preference number: 6 (lower is better)
Translates to: LVFQGDLLNGAHPVA*VLLTQTADEADGLI
Trigger: GATGAGCCCATCTGCCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCACCGGGTGCGCCCCATTGAGGAGGTCGCCCTGGAACACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS GCA 72 bp AGGCCTGGGGGTGCCCAGAAACTGCCTCGGGGAAGCTaGAGGAATCACGCACACAGGTACCGTCAACTGGGT +
Preference number: 6 (lower is better)
Translates to: RPGGAQKLPRGS*RNHAHRYRQLG
Trigger: ACCCAGTTGACGGTACCTGTGTGCGTGATTCCTGCAGCTTCCCCGAGGCAGTTTCTGGGCACCCCCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS GCA 72 bp CAACTGGGGAGGCGAAGGTTTGCAGTGAGCCGAGATTaGACCACTGCACCCCAGCCTGGACGACGGAGTGAG +
Preference number: 6 (lower is better)
Translates to: QLGRRRFAVSRD*TTAPQPGRRSE
Trigger: CTCACTCCGTCGTCCAGGCTGGGGTGCAGTGGTGCAATCTCGGCTCACTGCAAACCTTCGCCTCCCCAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS CCA 72 bp AGAGTGGCCATCTTCACCGGCCTGGCTCTCTGGATCTaGCTCCGGGGGATCCTGGAGTGCTCCTTCTGCACA +
Preference number: 6 (lower is better)
Translates to: RVAIFTGLALWI*LRGILECSFCT
Trigger: TGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAGGCCGGTGAAGATGGCCACTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS CCA 72 bp ACCTGCTTCAGGTGGCGCTTACACTGTGGCAGGGGCTaGGGGCTTAGGCTTCCCGGGCTCTTCCTTTCATGG +
Preference number: 6 (lower is better)
Translates to: TCFRWRLHCGRG*GLRLPGLFLSW
Trigger: CCATGAAAGGAAGAGCCCGGGAAGCCTAAGCCCCCAGCCCCTGCCACAGTGTAAGCGCCACCTGAAGCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS TCA 72 bp GTGGCATGTGCCTACAGTCCCAGCAACTCGGGAGGCTaGGGCAGGAGAATTGCTTCAACTGGGGAGGCGAAG +
Preference number: 6 (lower is better)
Translates to: VACAYSPSNSGG*GRRIASTGEAK
Trigger: CTTCGCCTCCCCAGTTGAAGCAATTCTCCTGCCTCAGCCTCCCGAGTTGCTGGGACTGTAGGCACATGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS GCA 72 bp CTGGCTCTCTGGATCTGGCTCCGGGGGATCCTGGAGTaGTCCTTCTGCACACTGGTGTTCTGCAGCTTGAAC +
Preference number: 6 (lower is better)
Translates to: LALWIWLRGILE*SFCTLVFCSLN
Trigger: GTTCAAGCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCCAGATCCAGAGAGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS CCA 72 bp AGCCGTGTCTGGTGGCCTTCCGGTGACCGAATGTTCTaGATTTCCAGGGCCTTCCTTCAGGTCCGCAGATGC +
Preference number: 6 (lower is better)
Translates to: SRVWWPSGDRMF*ISRAFLQVRRC
Trigger: GCATCTGCGGACCTGAAGGAAGGCCCTGGAAATCCAGAACATTCGGTCACCGGAAGGCCACCAGACACGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
CDS CCA 72 bp CCCGGGGTTGGGAACATCTCCCTCCCAGGTCCCTTCTaGGACTGTCTCCCCCATATGCTTTCTGCAAGACAC +
Preference number: 6 (lower is better)
Translates to: PGVGNISLPGPF*DCLPHMLSARH
Trigger: GTGTCTTGCAGAAAGCATATGGGGGAGACAGTCCCAGAAGGGACCTGGGAGGGAGATGTTCCCAACCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS CAA 72 bp CAGCTTCCTCTGCACCCGCTGCTTCAGCGCTTCAGTTaGTTTCTGGGGAGCAGAGGACAGGGAGGTATGGGG +
Preference number: 6 (lower is better)
Translates to: QLPLHPLLQRFS*FLGSRGQGGMG
Trigger: CCCCATACCTCCCTGTCCTCTGCTCCCCAGAAACAAACTGAAGCGCTGAAGCAGCGGGTGCAGAGGAAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS TCA 72 bp CCCGGTGGCCTTGGTGCTCCTGACTCAGACTGCAGATaGGGCAGATGGGCTCATCGTGATCCTCACAGAAGA +
Preference number: 6 (lower is better)
Translates to: PGGLGAPDSDCR*GRWAHRDPHRR
Trigger: TCTTCTGTGAGGATCACGATGAGCCCATCTGCCTCATCTGCAGTCTGAGTCAGGAGCACCAAGGCCACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000541159.5
ENST00000542898.5
CDS GCA 72 bp AGGTCCCTTCTGGGACTGTCTCCCCCATATGCTTTCTaGAAGACACCCCAGGGTACACCACAGGACCTCGCT +
Preference number: 6 (lower is better)
Translates to: RSLLGLSPPYAF*KTPQGTPQDLA
Trigger: AGCGAGGTCCTGTGGTGTACCCTGGGGTGTCTTGCAGAAAGCATATGGGGGAGACAGTCCCAGAAGGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS CCA 72 bp TCTTCAGGCTCCTGGGCTTGTTCTCCCCCAGGGAGCTaGACGCTGCGGAATCATCTGTGCCGTTTTCTTGTG +
Preference number: 6 (lower is better)
Translates to: SSGSWACSPPGS*TLRNHLCRFLV
Trigger: CACAAGAAAACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGAACAAGCCCAGGAGCCTGAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 72 bp ACGTGGATGTCCAGGAACCCCCAGAAGCCCACCTCCTaGAGGTGGATAAGAGGTGGGCTTATGCTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: TWMSRNPQKPTS*RWIRGGLMLPL
Trigger: AAGAGGCAGCATAAGCCCACCTCTTATCCACCTCCAGGAGGTGGGCTTCTGGGGGTTCCTGGACATCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539154.1
CDS GCA 72 bp TGGATCTGGCTCCGGGGGATCCTGGAGTGCTCCTTCTaGACACTGGTGTTCTGCAGCTTGAACTTGAACTTC +
Preference number: 6 (lower is better)
Translates to: WIWLRGILECSF*TLVFCSLNLNF
Trigger: GAAGTTCAAGTTCAAGCTGCAGAACACCAGTGTGCAGAAGGAGCACTCCAGGATCCCCCGGAGCCAGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000219596.6
ENST00000339854.8
ENST00000536379.5
ENST00000536980.5
ENST00000537682.5
ENST00000538326.5
ENST00000539145.5
ENST00000541159.5
ENST00000542898.5
ENST00000570511.5
ENST00000572244.5
ENST00000574583.5
ENST00000576315.5
CDS GCA 72 bp TCTCCCCCAGGGAGCTGGACGCTGCGGAATCATCTGTaGCGTTTTCTTGTGTGGAATATTCCTGAATGGCTG +
Preference number: 6 (lower is better)
Translates to: SPPGSWTLRNHL*RFLVWNIPEWL
Trigger: CAGCCATTCAGGAATATTCCACACAAGAAAACGGCACAGATGATTCCGCAGCGTCCAGCTCCCTGGGGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS GCA 72 bp GTCCACTTTTCAGGGACAGGCACTGTCTTAGCCCTGTaGAAGATGTCTCCAATGTCCCTGAATGGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: VHFSGTGTVLAL*KMSPMSLNGCP
Trigger: AGGGCAGCCATTCAGGGACATTGGAGACATCTTGCACAGGGCTAAGACAGTGCCTGTCCCTGAAAAGTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572244.5
CDS CAA 72 bp GGAGCTGGACGCTGCGGAATCATCTGTGCCGTTTTCTaGTGTGGAATATTCCTGAATGGCTGCCCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: GAGRCGIICAVF*CGIFLNGCPVE
Trigger: CTCCACAGGGCAGCCATTCAGGAATATTCCACACAAGAAAACGGCACAGATGATTCCGCAGCGTCCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000219596.6
ENST00000537682.5
ENST00000538326.5
ENST00000542898.5
ENST00000570511.5
CDS CCA 72 bp AACATAGCAAGACCCCATATCGGTGACCGAATGTTCTaGATTTCCAGGGCCTTCCTTCAGGTCCGCAGATGC +
Preference number: 6 (lower is better)
Translates to: NIARPHIGDRMF*ISRAFLQVRRC
Trigger: GCATCTGCGGACCTGAAGGAAGGCCCTGGAAATCCAGAACATTCGGTCACCGATATGGGGTCTTGCTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542898.5
CDS CCA 72 bp TTCAGCGCTTCAGTTTGTTTCGGTGACCGAATGTTCTaGATTTCCAGGGCCTTCCTTCAGGTCCGCAGATGC +
Preference number: 6 (lower is better)
Translates to: FSASVCFGDRMF*ISRAFLQVRRC
Trigger: GCATCTGCGGACCTGAAGGAAGGCCCTGGAAATCCAGAACATTCGGTCACCGAAACAAACTGAAGCGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570511.5
CDS CAA 72 bp CCAGGCCAGCACACACCATTACCGCTGGACTCACCATaGAACATTTCCATTTCTGAACGCAGGGTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: PGQHTPLPLDSP*NISISERRVSE
Trigger: CTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGGTGAGTCCAGCGGTAATGGTGTGTGCTGGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5
CDS CAA 90 bp GCAACAACCCCAGGCCAGCACACACCATTACCGCTGGACTCACCATaGAACATTTCCATTTCTGAACGCAGGGTTTCTGAGAAGTACTTT +
Preference number: 6 (lower is better)
Translates to: ATTPGQHTPLPLDSP*NISISERRVSEKYF
Trigger: AAAGTACTTCTCAGAAACCCTGCGTTCAGAAATGGAAATGTTCAATGGTGAGTCCAGCGGTAATGGTGTGTGCTGGCCTGGGGTTGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536980.5
ENST00000537682.5
ENST00000542898.5