RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEF2D (Homo sapiens)

Ensembl gene IDs: ENSG00000116604

Ensembl transcript IDs: ENST00000348159.9, ENST00000360595.7, ENST00000368240.6, ENST00000464356.6, ENST00000475587.2, ENST00000489057.1, ENST00000493077.1

Found 666 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCCGTCCGTCATCCCGGTCTCCCGTCTCATAGGATCCCCCGGCTaGGCTGCTGAGACCATCGCCAGGCTCAGGGCGGGCAGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: PPSVIPVSRLIGSPG*AAETIARLRAGSWE
Trigger: TTCCCAGCTGCCCGCCCTGAGCCTGGCGATGGTCTCAGCAGCCCAGCCGGGGGATCCTATGAGACGGGAGACCGGGATGACGGACGGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR CCA 90 bp TGGCTGTGGCTGCTGTGGCTGCGGTGGCTGCTGCTGTGGAGGCTGTaGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGT +
Preference number: 1 (lower is better)
Translates to: WLWLLWLRWLLLWRL*LLRLLGLLWLLPGS
Trigger: ACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAGCCTCCACAGCAGCAGCCACCGCAGCCACAGCAGCCACAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR TCA 90 bp CGTCATCCCGGTCTCCCGTCTCATAGGATCCCCCGGCTGGGCTGCTaGGACCATCGCCAGGCTCAGGGCGGGCAGCTGGGAACACAGCTG +
Preference number: 1 (lower is better)
Translates to: RHPGLPSHRIPRLGC*DHRQAQGGQLGTQL
Trigger: CAGCTGTGTTCCCAGCTGCCCGCCCTGAGCCTGGCGATGGTCTCAGCAGCCCAGCCGGGGGATCCTATGAGACGGGAGACCGGGATGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR GCA 90 bp GGTGGCTGCTGCTGTGGAGGCTGTGGCTGCTGCGGCTGCTGGGGCTaGTGTGGCTGTTGCCAGGCAGTGACATTGCCTAGCGACAGCCCC +
Preference number: 1 (lower is better)
Translates to: GGCCCGGCGCCGCWG*CGCCQAVTLPSDSP
Trigger: GGGGCTGTCGCTAGGCAATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAGCCTCCACAGCAGCAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR GCA 90 bp GGCTGCTGTGGCTGCGGTGGCTGCTGCTGTGGAGGCTGTGGCTGCTaGGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTG +
Preference number: 1 (lower is better)
Translates to: GCCGCGGCCCGGCGC*GCWGCCGCCQAVTL
Trigger: CAATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAGCCTCCACAGCAGCAGCCACCGCAGCCACAGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR GCA 90 bp TGTGGCTGCTGTGGCTGCGGTGGCTGCTGCTGTGGAGGCTGTGGCTaGTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACA +
Preference number: 1 (lower is better)
Translates to: CGCCGCGGCCCGGCG*CGCWGCCGCCQAVT
Trigger: TGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAGCCTCCACAGCAGCAGCCACCGCAGCCACAGCAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR CCA 90 bp GGCTGCGGTGGCTGCTGCTGTGGAGGCTGTGGCTGCTGCGGCTGCTaGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTGCCTAGCGAC +
Preference number: 1 (lower is better)
Translates to: GCGGCCCGGCGCCGC*GCCGCCQAVTLPSD
Trigger: GTCGCTAGGCAATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAGCCTCCACAGCAGCAGCCACCGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR GCA 90 bp TGTGGCTGCGGTGGCTGCTGCTGTGGAGGCTGTGGCTGCTGCGGCTaGTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTGCCTAGC +
Preference number: 1 (lower is better)
Translates to: CGCGGCCCGGCGCCG*WGCCGCCQAVTLPS
Trigger: GCTAGGCAATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAGCCTCCACAGCAGCAGCCACCGCAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR GCA 90 bp GCCTTCCCGGCCCAAAGCTCAGCCAGCACCCACACACCTTGGGGGTaGAGCACACACAAGAATCAGCGCAGGTGTGGCACGTGTGTGTGC +
Preference number: 1 (lower is better)
Translates to: AFPAQSSASTHTPWG*STHKNQRRCGTCVC
Trigger: GCACACACACGTGCCACACCTGCGCTGATTCTTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCTGGCTGAGCTTTGGGCCGGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR CCA 90 bp GAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGCTGAGGTaGCTGTTGCGGCTGCTGAGGCTGCTGTGGCTGTGGCTGCTGTGG +
Preference number: 1 (lower is better)
Translates to: EVAERYRDQVGLLLR*LLRLLRLLWLWLLW
Trigger: CCACAGCAGCCACAGCCACAGCAGCCTCAGCAGCCGCAACAGCCACCTCAGCAACAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR CCA 90 bp GGCTCATCAGTTTTTGAAACTCCGTCTAGAAGCCTGCAGGAGAGGTaGGAAGGCTGGACGTGCTGTCCCCACCCAGTCAGCGGATTGGGG +
Preference number: 1 (lower is better)
Translates to: GSSVFETPSRSLQER*EGWTCCPHPVSGLG
Trigger: CCCCAATCCGCTGACTGGGTGGGGACAGCACGTCCAGCCTTCCCACCTCTCCTGCAGGCTTCTAGACGGAGTTTCAAAAACTGATGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR TCA 90 bp GGGGTTGGGGGAAGAGGGTACTCCAGGAACTGTGTCAAGTGTGGGTaGCTAAGTGGACATATGTGGGTGGAAGCAGAGGTCCCTGGAGGG +
Preference number: 1 (lower is better)
Translates to: GVGGRGYSRNCVKCG*LSGHMWVEAEVPGG
Trigger: CCCTCCAGGGACCTCTGCTTCCACCCACATATGTCCACTTAGTCACCCACACTTGACACAGTTCCTGGAGTACCCTCTTCCCCCAACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 90 bp GTCTGGGGTTGGGGGAAGAGGGTACTCCAGGAACTGTGTCAAGTGTaGGTGACTAAGTGGACATATGTGGGTGGAAGCAGAGGTCCCTGG +
Preference number: 1 (lower is better)
Translates to: VWGWGKRVLQELCQV*VTKWTYVGGSRGPW
Trigger: CCAGGGACCTCTGCTTCCACCCACATATGTCCACTTAGTCACCCACACTTGACACAGTTCCTGGAGTACCCTCTTCCCCCAACCCCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR GCA 90 bp GCCCCTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTaGAAGAGGCTGGGTCATAGAGGTGGGCAAAGACGGTCGGCTAAC +
Preference number: 1 (lower is better)
Translates to: APLLLVPSLHQVWEY*KRLGHRGGQRRSAN
Trigger: GTTAGCCGACCGTCTTTGCCCACCTCTATGACCCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 90 bp TGCGTAGAGGCCCCTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATaGGAATACTGCAAGAGGCTGGGTCATAGAGGTGGGCAAAGACGG +
Preference number: 1 (lower is better)
Translates to: CVEAPLLLVPSLHQV*EYCKRLGHRGGQRR
Trigger: CCGTCTTTGCCCACCTCTATGACCCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAGGGGCCTCTACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR TCA 90 bp AAATGCCCAGTTCTTCAGAGGGAGTGGGTGGAGGCGAATTTGGCTTaGGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCC +
Preference number: 1 (lower is better)
Translates to: KCPVLQREWVEANLA*EEEDIKSSSEVWVP
Trigger: GGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTCAAGCCAAATTCGCCTCCACCCACTCCCTCTGAAGAACTGGGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 90 bp TTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTaGGTCATAGAGGTGGGCAAAGACGGTCGGCTAACACAAAACTGG +
Preference number: 1 (lower is better)
Translates to: FWFLPCIKYGNTARG*VIEVGKDGRLTQNW
Trigger: CCAGTTTTGTGTTAGCCGACCGTCTTTGCCCACCTCTATGACCCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 90 bp TTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGAGGCGAATTTaGCTTGAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGG +
Preference number: 1 (lower is better)
Translates to: LANAQFFRGSGWRRI*LERKKTLSPHLRSG
Trigger: CCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTCAAGCCAAATTCGCCTCCACCCACTCCCTCTGAAGAACTGGGCATTTGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTaGATCGAGGCTCATCAGTTTTTGAAACTCCGTCTAGAAGCCTGC +
Preference number: 1 (lower is better)
Translates to: GRMHEQDYTLASFKP*IEAHQFLKLRLEAC
Trigger: GCAGGCTTCTAGACGGAGTTTCAAAAACTGATGAGCCTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 90 bp CCTCACTTTCCCCTTGAAACACAAACCCACCCATCAAGCCCACTTTaGGGTTTCAGTCTAGAGTGTGGGTTTCTGTTGTTTGGTAGTTTT +
Preference number: 1 (lower is better)
Translates to: PHFPLETQTHPSSPL*GFSLECGFLLFGSF
Trigger: AAAACTACCAAACAACAGAAACCCACACTCTAGACTGAAACCCCAAAGTGGGCTTGATGGGTGGGTTTGTGTTTCAAGGGGAAAGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR GCA 90 bp GAAAGGACACTGAAACATCCACACATGGTAATCAAAAGCCAGGTTTaGCTTTATGAGGCAGAGGGCAAAACTGGTGAATATTGCACCGTG +
Preference number: 1 (lower is better)
Translates to: ERTLKHPHMVIKSQV*LYEAEGKTGEYCTV
Trigger: CACGGTGCAATATTCACCAGTTTTGCCCTCTGCCTCATAAAGGCAAACCTGGCTTTTGATTACCATGTGTGGATGTTTCAGTGTCCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR TCA 90 bp CAAGAACAACAGCAGAAGAATCTCGTCTGTACAGTACGGGCCGTTTaGGTCATTATTATTACAATATACTTTGACAAAAATAGAATCTCA +
Preference number: 1 (lower is better)
Translates to: QEQQQKNLVCTVRAV*VIIITIYFDKNRIS
Trigger: TGAGATTCTATTTTTGTCAAAGTATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCTGCTGTTGTTCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCTGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCC +
Preference number: 2 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGWEGST*RARHLS
Trigger: GGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCA...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGCTGGGGGCTCCAAGCTaGGTGCTGTGGGTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: QGAARDEVAERYRDQVGLLGAPS*VLWVGG
Trigger: CCCACCTACCCACAGCACCCAGCTTGGAGCCCCCAG...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR TCA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGCCCCGGCTGGGCTGCTaGGACCATCGCCAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: SRYQAASSSQLSPQPQALPRLGC*DHRQAQ
Trigger: CTGAGCCTGGCGATGGTCTCAGCAGCCCAGCCGGGG...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR TCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCCACACTCGCCCCAATaGAAGAGCTCTGGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGPHSPQ*KSSGLE
Trigger: CTCCAGGCCAGAGCTCTTTCATTGGGGCGAGTGTGG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCGCACAAGAAAGGAAGTaGGGGTCGAGCGGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGAQERK*GSSGRS
Trigger: GCTCCTCCCGCTCGACCCCCACTTCCTTTCTTGTGC...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCCAGCTTTACAGGGCTaGCGTCAACTGAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGPALQG*RQLRGG
Trigger: CCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCTCTCCCTGCACACTGTaGCCAGCTTTACAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGSPCTL*PALQGW
Trigger: CCAGCCCTGTAAAGCTGGCCACAGTGTGCAGGGAGA...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR CAA 90 bp TGGGTGCTGTGGGTAGGTGGGGGTGGAGACTTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTGGCCACAGGGAGGAGGCCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: WVLWVGGGGDLAGMT*FRLLPLATGRRPGE
Trigger: TTCCCCTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAAGTCTCCACCCCCACCTACCCACAGCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR GCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCACCCCGTGCTTCGGCTaGCCCTGGGCCCCTTGCCCA +
Preference number: 2 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPTPCFG*PWAPCP
Trigger: TGGGCAAGGGGCCCAGGGGCAGCCGAAGCACGGGGT...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGGGGCGCCGCACCCCTTaGGCAGAGGAGCTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: VQCVRAEGEHRERSREDRGRRTP*AEELGL
Trigger: CAAGCCCAGCTCCTCTGCCCAAGGGGTGCGGCGCCC...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGGGGAAGCCCGAGCACTaGCGTAGCCATTCCCAACAG +
Preference number: 2 (lower is better)
Translates to: SRYQAASSSQLSPQPQALGKPEH*RSHSQQ
Trigger: CTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCC...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACTCAGATTCCCAGGCTaGCTTCCCGGCCCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGLRFPG*LPGPKL
Trigger: GAGCTTTGGGCCGGGAAGGCAGCCTGGGAATCTGAG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGGGAGGGGCTCAATTTaGCCCCTGCCTAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGGRGSI*PLPSPS
Trigger: AGAAGGGCTAGGCAGGGGGCAAATTGAGCCCCTCCC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGAATCAGCGCAGGTGTaGCACGTGTGTGTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: TLWPALQGWRQLRGGELLESAQV*HVCVQG
Trigger: CCCCTGCACACACACGTGCCACACCTGCGCTGATTC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCCTCAGGGCGGGCAGCTaGGAACACAGCTGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: HFNVQVSSRILFTAEPSALRAGS*EHSWRG
Trigger: CCCCCTCCAGCTGTGTTCCCAGCTGCCCGCCCTGAG...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CCA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGCTCAGGGCGGGCAGCTaGGAACACAGCTGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQLRAGS*EHSWRG
Trigger: CCCCCTCCAGCTGTGTTCCCAGCTGCCCGCCCTGAG...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR GCA 90 bp TTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCACTCGCAGGTCGGGCTTaGGGCTGGGGGCTCCAAGCT +
Preference number: 2 (lower is better)
Translates to: FNVQVSSRILFTAEPSASLAGRA*GWGLQA
Trigger: AGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAG...TGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGTTAGGCTGTTGCCATTaGCCACAGGGAGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLLGCCH*PQGGGQ
Trigger: CTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAA...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CCA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGCTGGGGGCTCCAAGCTaGGTGCTGTGGGTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQLGAPS*VLWVGG
Trigger: CCCACCTACCCACAGCACCCAGCTTGGAGCCCCCAG...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCAGGGCTGGCGTCAACTaGGGGGTGGGGAGCTATTGC +
Preference number: 2 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPRAGVN*GVGSYC
Trigger: GCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCT...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCAGGTGGGACTGTTGCTaGGGTGGCTGTTGCGGCTGC +
Preference number: 2 (lower is better)
Translates to: HFNVQVSSRILFTAEPSARWDCC*GGCCGC
Trigger: GCAGCCGCAACAGCCACCTCAGCAACAGTCCCACCT...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR GCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGTGGGGCAGACAGTCTaGCTGGCCACGTCACCCCAG +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEVGQTV*LATSPQ
Trigger: CTGGGGTGACGTGGCCAGGCAGACTGTCTGCCCCAC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGCTGAGGCCTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: ARDEVAERYRDQVGLLLRPCLGC*HWPQGG
Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGG...CCTCAGCAACAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGGCAGACAGTCTGCCTaGCCACGTCACCCCAGGCCA +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVGRQSA*PRHPRP
Trigger: TGGCCTGGGGTGACGTGGCCAGGCAGACTGTCTGCC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGAGGAGAGCTCTGCACTaGTCAACTGGTAATCAAGTG +
Preference number: 2 (lower is better)
Translates to: QGAARDEVAERYRDQVGLRRALH*STGNQV
Trigger: CACTTGATTACCAGTTGACCAGTGCAGAGCTCTCCT...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CCA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGGACTTGATGCTGATGTaGGGGTGGGTGGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: SRYQAASSSQLSPQPQALDLMLM*GWVVTV
Trigger: CACAGTCACCACCCACCCCCACATCAGCATCAAGTC...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR TCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGGGGGCCAAGGAGGAATaGGGGAGGTGGGACCTCTAC +
Preference number: 2 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWGAKEE*GRWDLY
Trigger: GTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCC...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGGAGCTGGGCTTGTGTaGAGGAGTGGGGCAGACAGT +
Preference number: 2 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPGAGLV*RSGADS
Trigger: ACTGTCTGCCCCACTCCTTCACACAAGCCCAGCTCC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGGGAAGCCCGAGCACTaGCGTAGCCATTCCCAACAG +
Preference number: 2 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQGKPEH*RSHSQQ
Trigger: CTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCC...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGAGACTTGGCAGGGATaGCCTTGTTTAGGCTGTTGC +
Preference number: 2 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGETWQG*PCLGCC
Trigger: GCAACAGCCTAAACAAGGTCATCCCTGCCAAGTCTC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368240.6
3UTR-3UTR TCA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGGAGACTTGGCAGGGATaGCCTTGTTTAGGCTGTTGC +
Preference number: 2 (lower is better)
Translates to: SRYQAASSSQLSPQPQALETWQG*PCLGCC
Trigger: GCAACAGCCTAAACAAGGTCATCCCTGCCAAGTCTC...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR GCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACACACCTTGGGGGTaGAGCACACACAAGAATCAG +
Preference number: 2 (lower is better)
Translates to: TLWPALQGWRQLRGGELLHTPWG*STHKNQ
Trigger: CTGATTCTTGTGTGTGCTGCACCCCCAAGGTGTGTG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATAGCAGGCTGGGGGCCTaGCCCCTCTGGTTTGATCTC +
Preference number: 2 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHSRLGA*PLWFDL
Trigger: GAGATCAAACCAGAGGGGGCAGGCCCCCAGCCTGCT...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGTGTGCAGGGGCATTTaGGGGCCAGGCTTAAGTATT +
Preference number: 2 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGVCRGI*GPGLSI
Trigger: AATACTTAAGCCTGGCCCCCAAATGCCCCTGCACAC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGAGGTGGGATGCAGCCTaGAGGTGGTGGGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: VQCVRAEGEHRERSREDRRWDAA*RWWDKE
Trigger: CTCCTTGTCCCACCACCTCCAGGCTGCATCCCACCT...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCCACACTCGCCCCAATaGAAGAGCTCTGGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVPHSPQ*KSSGLE
Trigger: CTCCAGGCCAGAGCTCTTTCATTGGGGCGAGTGTGG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATCCACACTCGCCCCAATaGAAGAGCTCTGGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHPHSPQ*KSSGLE
Trigger: CTCCAGGCCAGAGCTCTTTCATTGGGGCGAGTGTGG...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp CTGTGGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTCAACTGGTAATCAAGTaGTGCATTAACCCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: LWLLRLLGLLWLLPGSDIQLVIK*CINPFP
Trigger: AGGAAAGGGGTTAATGCATCACTTGATTACCAGTTG...AATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR GCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCTCAGATTCCCAGGCTaGCTTCCCGGCCCAAAGCTC +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIELRFPG*LPGPKL
Trigger: GAGCTTTGGGCCGGGAAGGCAGCCTGGGAATCTGAG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAGCTCAATTTGCCCCCTaGCTAGCCCTTCTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: GLASTEGWGAIALYILEKAQFAP*LALLPS
Trigger: GGAGGGCAGAAGGGCTAGGCAGGGGGCAAATTGAGC...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR GCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGCTCAATTTGCCCCCTaGCTAGCCCTTCTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEAQFAP*LALLPS
Trigger: GGAGGGCAGAAGGGCTAGGCAGGGGGCAAATTGAGC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGGGAGGGGCTCAATTTaGCCCCTGCCTAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHGRGSI*PLPSPS
Trigger: AGAAGGGCTAGGCAGGGGGCAAATTGAGCCCCTCCC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAGCACAAGAAAGGAAGTaGGGGTCGAGCGGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: GLASTEGWGAIALYILEKAQERK*GSSGRS
Trigger: GCTCCTCCCGCTCGACCCCCACTTCCTTTCTTGTGC...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGAATCAGCGCAGGTGTaGCACGTGTGTGTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEESAQV*HVCVQG
Trigger: CCCCTGCACACACACGTGCCACACCTGCGCTGATTC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGAGCACCCACACACCTTaGGGGTGCAGCACACACAAG +
Preference number: 2 (lower is better)
Translates to: VQCVRAEGEHRERSREDRSTHTP*GCSTHK
Trigger: CTTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCT...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGAGGTGGGATGCAGCCTaGAGGTGGTGGGACAAGGAG +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIERWDAA*RWWDKE
Trigger: CTCCTTGTCCCACCACCTCCAGGCTGCATCCCACCT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGGGGCCTGCCCCCTCTaGTTTGATCTCCAATCCTGC +
Preference number: 2 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHGACPL*FDLQSC
Trigger: GCAGGATTGGAGATCAAACCAGAGGGGGCAGGCCCC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATCCAGGGCTGTGGAGCTaGAGCAGCCAACTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHPGLWS*SSQLSL
Trigger: AAGGGAGAGTTGGCTGCTCCAGCTCCACAGCCCTGG...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGGAAGCAGAGGTCCCTaGAGGGAGAGACCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEGSRGP*RERPWQ
Trigger: CTGCCAAGGTCTCTCCCTCCAGGGACCTCTGCTTCC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGAGCCTGCAGGAGAGGTaGGAAGGCTGGACGTGCTGT +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIESLQER*EGWTCC
Trigger: ACAGCACGTCCAGCCTTCCCACCTCTCCTGCAGGCT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTTAGGCTGTTGCCATTaGCCACAGGGAGGAGGCCAG +
Preference number: 2 (lower is better)
Translates to: HFNVQVSSRILFTAEPSALGCCH*PQGGGQ
Trigger: CTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAA...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CCA 90 bp GCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGCTGAGGAGGAGAGCTCTGCACTaGTCAACTGGTAATCAAGTG +
Preference number: 2 (lower is better)
Translates to: ARDEVAERYRDQVGLLLRRRALH*STGNQV
Trigger: CACTTGATTACCAGTTGACCAGTGCAGAGCTCTCCT...CCTCAGCAACAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR TCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGGGAAGGGCGGGCGGTaGGATTGTCAACTCTTCATC +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVGKGGR*DCQLFI
Trigger: GATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCTGCCCCCTCTGGTTTaGTCTCCAATCCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIELPPLV*SPILPE
Trigger: CTCAGGCAGGATTGGAGATCAAACCAGAGGGGGCAG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAAGCAGGCTGGGGGCCTaGCCCCTCTGGTTTGATCTC +
Preference number: 2 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTSRLGA*PLWFDL
Trigger: GAGATCAAACCAGAGGGGGCAGGCCCCCAGCCTGCT...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGTATTGCACCGTGAATTaGAGGGGCCCTCACCCCCAC +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVYCTVN*RGPHPH
Trigger: GTGGGGGTGAGGGCCCCTGCAATTCACGGTGCAATA...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAGCACCCACACACCTTaGGGGTGCAGCACACACAAG +
Preference number: 2 (lower is better)
Translates to: GLASTEGWGAIALYILEKSTHTP*GCSTHK
Trigger: CTTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGAGCACCCACACACCTTaGGGGTGCAGCACACACAAG +
Preference number: 2 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWSTHTP*GCSTHK
Trigger: CTTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCT...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCCAATGAAAGAGCTCTaGCCTGGAGCACCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEPMKEL*PGAPQG
Trigger: TCCCTGGGGTGCTCCAGGCCAGAGCTCTTTCATTGG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCACTCTACTCTCCAACTaGGAGGAAACCCCAAGGGGG +
Preference number: 2 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPTLLSN*EETPRG
Trigger: CCCCCTTGGGGTTTCCTCCCAGTTGGAGAGTAGAGT...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCGACTTGATGCTGATGTaGGGGTGGGTGGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: HFNVQVSSRILFTAEPSADLMLM*GWVVTV
Trigger: CACAGTCACCACCCACCCCCACATCAGCATCAAGTC...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR GCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCCCCCACCCCCTTCCTaGAGCATATGTGTACAACGT +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEPPPPS*SICVQR
Trigger: ACGTTGTACACATATGCTGCAGGAAGGGGGTGGGGG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGTATTCTGCTCCATGTaGCTATGGCTACATGAACAC +
Preference number: 2 (lower is better)
Translates to: TLWPALQGWRQLRGGELLVFCSM*LWLHEH
Trigger: GTGTTCATGTAGCCATAGGCACATGGAGCAGAATAC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR GCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAGCTCAATTTGCCCCCTaGCTAGCCCTTCTGCCCTCC +
Preference number: 2 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTAQFAP*LALLPS
Trigger: GGAGGGCAGAAGGGCTAGGCAGGGGGCAAATTGAGC...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGTACACGTGTGTACCTaGGTAGAGGCCCCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVVHVCT*VEAPLL
Trigger: AAGCAGAGGGGCCTCTACGCAGGTACACACGTGTAC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGCCTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQPCLGC*HWPQGG
Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGG...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAGATGCAGCCTGGAGGTaGTGGGACAAGGAGGTAGCC +
Preference number: 2 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTDAAWR*WDKEVA
Trigger: GGCTACCTCCTTGTCCCACCACCTCCAGGCTGCATC...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGACTCTACTCTCCAACTaGGAGGAAACCCCAAGGGGG +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIETLLSN*EETPRG
Trigger: CCCCCTTGGGGTTTCCTCCCAGTTGGAGAGTAGAGT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGAGGCCCCTCTGCTTCTaGTTCCTTCCCTGCATCAAG +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIERPLCF*FLPCIK
Trigger: CTTGATGCAGGGAAGGAACCAGAAGCAGAGGGGCCT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGTGGACATATGTGGGTaGAAGCAGAGGTCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEVDICG*KQRSLE
Trigger: CTCCAGGGACCTCTGCTTCCACCCACATATGTCCAC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCACACACCTTGGGGGTaGAGCACACACAAGAATCAG +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVHTPWG*STHKNQ
Trigger: CTGATTCTTGTGTGTGCTGCACCCCCAAGGTGTGTG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGTCTCCCCATTCTCCCTaGACACTGTGGCCAGCTTTA +
Preference number: 2 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWSPHSP*TLWPAL
Trigger: TAAAGCTGGCCACAGTGTGCAGGGAGAATGGGGAGA...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGTGCTCCATGTGCCTATaGCTACATGAACACAAAAAC +
Preference number: 2 (lower is better)
Translates to: TLWPALQGWRQLRGGELLCSMCL*LHEHKN
Trigger: GTTTTTGTGTTCATGTAGCCATAGGCACATGGAGCA...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGCGTCAACTGAGGGGTaGGGAGCTATTGCACTGTAT +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVASTEG*GAIALY
Trigger: ATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACACCAATGAAAGAGCTCTaGCCTGGAGCACCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTPMKEL*PGAPQG
Trigger: TCCCTGGGGTGCTCCAGGCCAGAGCTCTTTCATTGG...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACATGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCC +
Preference number: 2 (lower is better)
Translates to: FLDCYTANVFQRSLFTITWEGST*RARHLS
Trigger: GGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCA...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR GCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACACTTTCCCTCCAAATGTaGTTCCAGAGAGGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTLSLQM*FQRGPH
Trigger: GTGGGGGCCTCTCTGGAAGCACATTTGGAGGGAAAG...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCTAAGTGGACATATGTaGGTGGAAGCAGAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIELSGHM*VEAEVP
Trigger: AGGGACCTCTGCTTCCACCCACATATGTCCACTTAG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCTAAGTGGACATATGTaGGTGGAAGCAGAGGTCCCT +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVLSGHM*VEAEVP
Trigger: AGGGACCTCTGCTTCCACCCACATATGTCCACTTAG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGGGGAAGGGCGGGCGGTaGGATTGTCAACTCTTCATC +
Preference number: 2 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGGKGGR*DCQLFI
Trigger: GATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCC...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGAATCAGCGCAGGTGTaGCACGTGTGTGTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTESAQV*HVCVQG
Trigger: CCCCTGCACACACACGTGCCACACCTGCGCTGATTC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGAATACTGCAAGAGGCTaGGTCATAGAGGTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIENTARG*VIEVGK
Trigger: TTTGCCCACCTCTATGACCCAGCCTCTTGCAGTATT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCCTTTTCAGAACCTCTaGCTCACTTTCCCCTTGAAA +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVPFQNL*LTFPLK
Trigger: TTTCAAGGGGAAAGTGAGGCAGAGGTTCTGAAAAGG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCAAGTATGGGAATACTaGAAGAGGCTGGGTCATAGA +
Preference number: 2 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEQVWEY*KRLGHR
Trigger: TCTATGACCCAGCCTCTTGCAGTATTCCCATACTTG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACCAGCTTTACAGGGCTaGCGTCAACTGAGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: FLDCYTANVFQRSLFTITPALQG*RQLRGG
Trigger: CCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCAAGAGCAAGGAGGTaGGGTCAGGAGCAGAAGGAG +
Preference number: 2 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTPRARR*GQEQKE
Trigger: CTCCTTCTGCTCCTGACCCCACCTCCTTGCTCTTGG...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGGGAAGGGCGGGCGGTaGGATTGTCAACTCTTCATC +
Preference number: 2 (lower is better)
Translates to: FLDCYTANVFQRSLFTITGKGGR*DCQLFI
Trigger: GATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR GCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAATCAAAAGCCAGGTTTaGCTTTATGAGGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTIKSQV*LYEAEG
Trigger: GCCCTCTGCCTCATAAAGGCAAACCTGGCTTTTGAT...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCAGGCCCCTCTGCTTCTaGTTCCTTCCCTGCATCAAG +
Preference number: 2 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTRPLCF*FLPCIK
Trigger: CTTGATGCAGGGAAGGAACCAGAAGCAGAGGGGCCT...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGAACTGTGTCAAGTGTaGGTGACTAAGTGGACATAT +
Preference number: 2 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVELCQV*VTKWTY
Trigger: ATATGTCCACTTAGTCACCCACACTTGACACAGTTC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGACAGTACGGGCCGTTTaGGTCATTATTATTACAATA +
Preference number: 2 (lower is better)
Translates to: VQCVRAEGEHRERSREDRTVRAV*VIIITI
Trigger: TATTGTAATAATAATGACTCAAACGGCCCGTACTGT...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACCCCCACCCCCTTCCTaGAGCATATGTGTACAACGT +
Preference number: 2 (lower is better)
Translates to: FLDCYTANVFQRSLFTITPPPPS*SICVQR
Trigger: ACGTTGTACACATATGCTGCAGGAAGGGGGTGGGGG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTTTCCCTCCAAATGTaGTTCCAGAGAGGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLSLQM*FQRGPH
Trigger: GTGGGGGCCTCTCTGGAAGCACATTTGGAGGGAAAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATGATGCAGCCTGGAGGTaGTGGGACAAGGAGGTAGCC +
Preference number: 2 (lower is better)
Translates to: RRISSVQYGPFESLLLQYDAAWR*WDKEVA
Trigger: GGCTACCTCCTTGTCCCACCACCTCCAGGCTGCATC...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACATACAGAAAGAGGGGATaGGAGCATCCCCCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: FLDCYTANVFQRSLFTITYRKRG*EHPPLQ
Trigger: TTGGAGAGGGGGATGCTCTCATCCCCTCTTTCTGTA...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR TCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATAGACCATCCCAGTGTTaGCTCCCCCAGGTAGTGTGC +
Preference number: 2 (lower is better)
Translates to: RRISSVQYGPFESLLLQYRPSQC*LPQVVC
Trigger: GCACACTACCTGGGGGAGTCAACACTGGGATGGTCT...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR TCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCATGGTGGGAATAGCCTaGGAAGGGAAGGCCATTCAT +
Preference number: 2 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTMVGIA*EGKAIH
Trigger: ATGAATGGCCTTCCCTTCTCAGGCTATTCCCACCAT...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGAGGGACTTGAGTTTTaGTCTGAAAGCAGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTEGLEF*SESRSG
Trigger: CCCAGACCTGCTTTCAGAGCAAAACTCAAGTCCCTC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACATGCTCCATGTGCCTATaGCTACATGAACACAAAAAC +
Preference number: 2 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTCSMCL*LHEHKN
Trigger: GTTTTTGTGTTCATGTAGCCATAGGCACATGGAGCA...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGTGTGCAGGGGCATTTaGGGGCCAGGCTTAAGTATT +
Preference number: 2 (lower is better)
Translates to: FLDCYTANVFQRSLFTITVCRGI*GPGLSI
Trigger: AATACTTAAGCCTGGCCCCCAAATGCCCCTGCACAC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGTGTGGGTGACTAAGTaGACATATGTGGGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTVWVTK*TYVGGS
Trigger: GCTTCCACCCACATATGTCCACTTAGTCACCCACAC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGTATTCTGCTCCATGTaGCTATGGCTACATGAACAC +
Preference number: 2 (lower is better)
Translates to: FLDCYTANVFQRSLFTITVFCSM*LWLHEH
Trigger: GTGTTCATGTAGCCATAGGCACATGGAGCAGAATAC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR GCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCTTCTGGTTCCTTCCCTaGATCAAGTATGGGAATACT +
Preference number: 2 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTFWFLP*IKYGNT
Trigger: AGTATTCCCATACTTGATGCAGGGAAGGAACCAGAA...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATCCATCAAGCCCACTTTaGGGTTTCAGTCTAGAGTGT +
Preference number: 2 (lower is better)
Translates to: RRISSVQYGPFESLLLQYPSSPL*GFSLEC
Trigger: ACACTCTAGACTGAAACCCCAAAGTGGGCTTGATGG...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR GCA 72 bp GGTGGCTGCTGCTGTGGAGGCTGTGGCTGCTGCGGCTaGTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACA +
Preference number: 3 (lower is better)
Translates to: GGCCCGGCGCCG*WGCCGCCQAVT
Trigger: TGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAGCCTCCACAGCAGCAGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR CCA 72 bp GGCTGCTGCTGTGGAGGCTGTGGCTGCTGCGGCTGCTaGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTG +
Preference number: 3 (lower is better)
Translates to: GCCCGGCGCCGC*GCCGCCQAVTL
Trigger: CAATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAGCCTCCACAGCAGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CAA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCAGCACCCACACACCTaGGGGGTGCAGCACACACAA +
Preference number: 3 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGQHPHT*GVQHTQ
Trigger: TTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCTG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CAA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGGCTGCGCTCACGGCTaGGGGACACCGGTTCTGACT +
Preference number: 3 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGGCAHG*GTPVLT
Trigger: AGTCAGAACCGGTGTCCCCAAGCCGTGAGCGCAGCC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368240.6
3UTR-3UTR CAA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGGGGCGCCGCACCCCTaGGGCAGAGGAGCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHGAPHP*GRGAGL
Trigger: AAGCCCAGCTCCTCTGCCCAAGGGGTGCGGCGCCCC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 72 bp GTGATCCTAGAGAGCAGGCTGGGGGCCTGCCCCCTCTaGTTTGATCTCCAATCCTGCCTGAGGTCTCAGGAC +
Preference number: 3 (lower is better)
Translates to: VILESRLGACPL*FDLQSCLRSQD
Trigger: GTCCTGAGACCTCAGGCAGGATTGGAGATCAAACCAGAGGGGGCAGGCCCCCAGCCTGCTCTCTAGGATCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CAA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCCCATCAAGCCCACTTaGGGGTTTCAGTCTAGAGTG +
Preference number: 3 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGPIKPT*GFQSRV
Trigger: CACTCTAGACTGAAACCCCAAAGTGGGCTTGATGGG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CAA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACAGCACCCACACACCTaGGGGGTGCAGCACACACAA +
Preference number: 3 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGQHPHT*GVQHTQ
Trigger: TTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCTG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CAA 90 bp TTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAACTCGCAGGTCGGGCTaGCGGCTGGGGGCTCCAAGC +
Preference number: 3 (lower is better)
Translates to: FNVQVSSRILFTAEPSASTRRSG*RLGAPS
Trigger: GCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGT...TGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CAA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGTTTAGGCTGTTGCCATaGGCCACAGGGAGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLFRLLP*ATGRRP
Trigger: TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAA...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CAA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTG +
Preference number: 3 (lower is better)
Translates to: QGAARDEVAERYRDQVGLLAGMT*FRLLPL
Trigger: CAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CAA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCGGCTGCGCTCACGGCTaGGGGACACCGGTTCTGACT +
Preference number: 3 (lower is better)
Translates to: HFNVQVSSRILFTAEPSAGCAHG*GTPVLT
Trigger: AGTCAGAACCGGTGTCCCCAAGCCGTGAGCGCAGCC...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR CCA 72 bp CATTCTCCCTGCACACTGTGGCCAGCTTTACAGGGCTaGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGT +
Preference number: 3 (lower is better)
Translates to: HSPCTLWPALQG*RQLRGGELLHC
Trigger: ACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGTGCAGGGAGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CAA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACCCATCAAGCCCACTTaGGGGTTTCAGTCTAGAGTG +
Preference number: 3 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGPIKPT*GFQSRV
Trigger: CACTCTAGACTGAAACCCCAAAGTGGGCTTGATGGG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CAA 90 bp TTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGGCTGCTGTGGCTGTaGCCAGGCAGTGACATTGCC +
Preference number: 3 (lower is better)
Translates to: FNVQVSSRILFTAEPSASGLLWL*PGSDIA
Trigger: GGCAATGTCACTGCCTGGCAACAGCCACAGCAGCCC...TGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CAA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCAGCACCCACACACCTaGGGGGTGCAGCACACACAA +
Preference number: 3 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVQHPHT*GVQHTQ
Trigger: TTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCTG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR TCA 72 bp GCTGTGGGAAACCTGGGGAGGGGGAGGGCCATTAGATaGCTCCAGTGGTTACTTTGGCAAATGCCCAGTTCT +
Preference number: 3 (lower is better)
Translates to: AVGNLGRGRAIR*LQWLLWQMPSS
Trigger: AGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATCTAATGGCCCTCCCCCTCCCCAGGTTTCCCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CAA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGAAAGCAGGTCTGGGGTaGGGGGAAGAGGGTACTCCA +
Preference number: 3 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVKAGLG*GEEGTP
Trigger: TGGAGTACCCTCTTCCCCCAACCCCAGACCTGCTTT...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CAA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGACCTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGG +
Preference number: 3 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQTLFRL*PLATGR
Trigger: CCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGT...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR-3UTR CAA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCACCTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGG +
Preference number: 3 (lower is better)
Translates to: HFNVQVSSRILFTAEPSATLFRL*PLATGR
Trigger: CCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGT...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR TCA 72 bp GCACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTaGGGGGTGGGGAGCTATTGCACTGTATATCTTAGA +
Preference number: 3 (lower is better)
Translates to: AHCGQLYRAGVN*GVGSYCTVYLR
Trigger: TCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CAA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCCCCATCAAGCCCACTTaGGGGTTTCAGTCTAGAGTG +
Preference number: 3 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPPIKPT*GFQSRV
Trigger: CACTCTAGACTGAAACCCCAAAGTGGGCTTGATGGG...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CAA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATTGTGTGCAGGGGCATTaGGGGGCCAGGCTTAAGTAT +
Preference number: 3 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHCVQGH*GARLKY
Trigger: ATACTTAAGCCTGGCCCCCAAATGCCCCTGCACACA...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR TCA 72 bp GGAAGAGGGTACTCCAGGAACTGTGTCAAGTGTGGGTaGCTAAGTGGACATATGTGGGTGGAAGCAGAGGTC +
Preference number: 3 (lower is better)
Translates to: GRGYSRNCVKCG*LSGHMWVEAEV
Trigger: GACCTCTGCTTCCACCCACATATGTCCACTTAGTCACCCACACTTGACACAGTTCCTGGAGTACCCTCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR GCA 72 bp CTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTaGAAGAGGCTGGGTCATAGAGGTGGGCAAAGACGG +
Preference number: 3 (lower is better)
Translates to: LLVPSLHQVWEY*KRLGHRGGQRR
Trigger: CCGTCTTTGCCCACCTCTATGACCCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR GCA 72 bp GGGCCATTAGATGACTCCAGTGGTTACTTTGGCAAATaGCCAGTTCTTCAGAGGGAGTGGGTGGAGGCGAAT +
Preference number: 3 (lower is better)
Translates to: GPLDDSSGYFGK*PVLQREWVEAN
Trigger: ATTCGCCTCCACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATCTAATGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 72 bp CTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTaGGTCATAGAGGTGGGCAAAGACGGTCGGCTAACA +
Preference number: 3 (lower is better)
Translates to: LPCIKYGNTARG*VIEVGKDGRLT
Trigger: TGTTAGCCGACCGTCTTTGCCCACCTCTATGACCCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 72 bp TGGGGGAAGAGGGTACTCCAGGAACTGTGTCAAGTGTaGGTGACTAAGTGGACATATGTGGGTGGAAGCAGA +
Preference number: 3 (lower is better)
Translates to: WGKRVLQELCQV*VTKWTYVGGSR
Trigger: TCTGCTTCCACCCACATATGTCCACTTAGTCACCCACACTTGACACAGTTCCTGGAGTACCCTCTTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CAA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTG +
Preference number: 3 (lower is better)
Translates to: HFNVQVSSRILFTAEPSALAGMT*FRLLPL
Trigger: CAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR CCA 72 bp GTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTaGGGAGCTATTGCACTGTATATCTTAGAGAAAAAC +
Preference number: 3 (lower is better)
Translates to: VASFTGLASTEG*GAIALYILEKN
Trigger: GTTTTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR CCA 72 bp GCCCAGTTCTTCAGAGGGAGTGGGTGGAGGCGAATTTaGCTTGAGAGGAAGAAGACATTAAGTCCTCATCTG +
Preference number: 3 (lower is better)
Translates to: AQFFRGSGWRRI*LERKKTLSPHL
Trigger: CAGATGAGGACTTAATGTCTTCTTCCTCTCAAGCCAAATTCGCCTCCACCCACTCCCTCTGAAGAACTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR TCA 72 bp GTTCTTCAGAGGGAGTGGGTGGAGGCGAATTTGGCTTaGGAGGAAGAAGACATTAAGTCCTCATCTGAGGTC +
Preference number: 3 (lower is better)
Translates to: VLQREWVEANLA*EEEDIKSSSEV
Trigger: GACCTCAGATGAGGACTTAATGTCTTCTTCCTCTCAAGCCAAATTCGCCTCCACCCACTCCCTCTGAAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACATTTAGGCTGTTGCCATaGGCCACAGGGAGGAGGCCA +
Preference number: 3 (lower is better)
Translates to: FLDCYTANVFQRSLFTITFRLLP*ATGRRP
Trigger: TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAA...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368240.6
3UTR-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACATGTGTGCAGGGGCATTaGGGGGCCAGGCTTAAGTAT +
Preference number: 3 (lower is better)
Translates to: FLDCYTANVFQRSLFTITCVQGH*GARLKY
Trigger: ATACTTAAGCCTGGCCCCCAAATGCCCCTGCACACA...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
3UTR-3UTR CAA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATCAGACCATCCCAGTGTaGACTCCCCCAGGTAGTGTG +
Preference number: 3 (lower is better)
Translates to: RRISSVQYGPFESLLLQYQTIPV*TPPGSV
Trigger: CACACTACCTGGGGGAGTCAACACTGGGATGGTCTG...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR CCA 72 bp CATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTaGATCGAGGCTCATCAGTTTTTGAAACTCCGTCTA +
Preference number: 3 (lower is better)
Translates to: HEQDYTLASFKP*IEAHQFLKLRL
Trigger: TAGACGGAGTTTCAAAAACTGATGAGCCTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR GCA 72 bp CTGAAACATCCACACATGGTAATCAAAAGCCAGGTTTaGCTTTATGAGGCAGAGGGCAAAACTGGTGAATAT +
Preference number: 3 (lower is better)
Translates to: LKHPHMVIKSQV*LYEAEGKTGEY
Trigger: ATATTCACCAGTTTTGCCCTCTGCCTCATAAAGGCAAACCTGGCTTTTGATTACCATGTGTGGATGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
3UTR TCA 72 bp CAGCAGAAGAATCTCGTCTGTACAGTACGGGCCGTTTaGGTCATTATTATTACAATATACTTTGACAAAAAT +
Preference number: 3 (lower is better)
Translates to: QQKNLVCTVRAV*VIIITIYFDKN
Trigger: ATTTTTGTCAAAGTATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCTGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGGCAGGCCCGGGGCCGAGCGCCTaGGCCGCCTCGGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: ARGSPSTDVAIPNRAGAGPGPSA*AASAVV
Trigger: AACAACAGCCGAGGCGGCTCAGGCGCTCGGCCCCGG...GCCTGCCCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTGGTCGGGCTTGCGGCTaGGGGCTCCAAGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGGRACG*GLQAGC
Trigger: GCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACC...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTCTCAGCCTCAGGCTCTaGGGCTGGGCGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGLSLRL*GWAQQA
Trigger: GGCCTGCTGCGCCCAGCCCCAGAGCCTGAGGCTGAG...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp CTGTGGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTCCGGGGCCGAGCGCCTaGGCCGCCTCGGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: LWLLRLLGLLWLLPGSDIPGPSA*AASAVV
Trigger: AACAACAGCCGAGGCGGCTCAGGCGCTCGGCCCCGG...AATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR GCA 90 bp GCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGGCAGGCCTCGCAGGTCGGGCTTaGGGCTGGGGGCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: ARGSPSTDVAIPNRAGAGLAGRA*GWGLQA
Trigger: AGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAG...GCCTGCCCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTAGGGGAGGGGCTCGCTaGGTGGTGGGTCTCGGCACA +
Preference number: 4 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGRGGAR*VVGLGT
Trigger: TGTGCCGAGACCCACCACCCAGCGAGCCCCTCCCCT...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGGAGCCGCGGGTCCGTaGGGGATGATGTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKGAAGP*GMMSPG
Trigger: CCCTGGTGACATCATCCCTCACGGACCCGCGGCTCC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGACCCCGTGCTTCGGCTaGCCCTGGGCCCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLTPCFG*PWAPCP
Trigger: TGGGCAAGGGGCCCAGGGGCAGCCGAAGCACGGGGT...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGGGTCTCAGGACCCCGTaGTTCGGCTGCCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLGLRTP*FGCPWA
Trigger: GGCCCAGGGGCAGCCGAAGCACGGGGTCCTGAGACC...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCGGTCGGGCTTGCGGCTaGGGGCTCCAAGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGGRACG*GLQAGC
Trigger: GCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACC...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGAGGCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGCTCAGGCTCTGGGGCTaGGCGCAGCAGGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EEARGSPSTDVAIPNRAGLRLWG*AQQAQC
Trigger: ACACTGGGCCTGCTGCGCCCAGCCCCAGAGCCTGAG...CCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGGCAGGCTCCTCAGGGTCTCGATaGTGTCGGCGTTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: ARGSPSTDVAIPNRAGAGSSGSR*CRRWCG
Trigger: GCCGCACCAACGCCGACATCATCGAGACCCTGAGGA...GCCTGCCCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGGCAGGCGGCTGTCGCAGCCGTTaGAGCCCTTCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ARGSPSTDVAIPNRAGAGGCRSR*SPSSSG
Trigger: CCCTGAGGAAGAAGGGCTTCAACGGCTGCGACAGCC...GCCTGCCCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAATCACCAGGGAAGGGGTaGCCAGGGAGCCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKSPGKG*PGSRWD
Trigger: ATCCCAGCGGCTCCCTGGTCACCCCTTCCCTGGTGA...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGCTCGCAGGTCGGGCTTaGGGCTGGGGGCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLLAGRA*GWGLQA
Trigger: AGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAG...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAATGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKWEGST*RARHLS
Trigger: GGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCA...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTGGTAGCCCTCGCCCCTaGTCCGGGGGATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGGSPRP*SGGSST
Trigger: TGTTGAAGATCCCCCGGACCAGGGGCGAGGGCTACC...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAGGGGAGGGGCTCGCTaGGTGGTGGGTCTCGGCACA +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLRGGAR*VVGLGT
Trigger: TGTGCCGAGACCCACCACCCAGCGAGCCCCTCCCCT...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCTCAGGGCGGGCAGCTaGGAACACAGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGLRAGS*EHSWRG
Trigger: CCCCCTCCAGCTGTGTTCCCAGCTGCCCGCCCTGAG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGCTCAGGGCGGGCAGCTaGGAACACAGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QGAARDEVAERYRDQVGLLRAGS*EHSWRG
Trigger: CCCCCTCCAGCTGTGTTCCCAGCTGCCCGCCCTGAG...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCTCAGGCTCTGGGGCTaGGCGCAGCAGGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGLRLWG*AQQAQC
Trigger: ACACTGGGCCTGCTGCGCCCAGCCCCAGAGCCTGAG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAAGGTGGGACTGTTGCTaGGGTGGCTGTTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKRWDCC*GGCCGC
Trigger: GCAGCCGCAACAGCCACCTCAGCAACAGTCCCACCT...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGGAGGCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGAGGTGGGACTGTTGCTaGGGTGGCTGTTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: EEARGSPSTDVAIPNRAGRWDCC*GGCCGC
Trigger: GCAGCCGCAACAGCCACCTCAGCAACAGTCCCACCT...CCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGCCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAAGGGCTGGCGTCAACTaGGGGGTGGGGAGCTATTGC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKRAGVN*GVGSYC
Trigger: GCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCT...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGGGGCCAAGGAGGAATaGGGGAGGTGGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKGAKEE*GRWDLY
Trigger: GTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGGGCTCGCTGGGTGGTaGGTCTCGGCACACCTTACA +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKGLAGW*VSAHLT
Trigger: TGTAAGGTGTGCCGAGACCCACCACCCAGCGAGCCC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCGAGGGGCTCGCTGGGTaGTGGGTCTCGGCACACCTT +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGEGLAG*WVSAHL
Trigger: AAGGTGTGCCGAGACCCACCACCCAGCGAGCCCCTC...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp CTGTGGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTGAGGGGCTCGCTGGGTaGTGGGTCTCGGCACACCTT +
Preference number: 4 (lower is better)
Translates to: LWLLRLLGLLWLLPGSDIEGLAG*WVSAHL
Trigger: AAGGTGTGCCGAGACCCACCACCCAGCGAGCCCCTC...AATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGGAGGGGCTCGCTGGGTaGTGGGTCTCGGCACACCTT +
Preference number: 4 (lower is better)
Translates to: QGAARDEVAERYRDQVGLEGLAG*WVSAHL
Trigger: AAGGTGTGCCGAGACCCACCACCCAGCGAGCCCCTC...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCGCACTAGCTGGCCGCTaGGGCAGGCCAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGALAGR*GRPGDT
Trigger: TGTGTCTCCTGGCCTGCCCCAGCGGCCAGCTAGTGC...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp CTGTGGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTCTGGGGGCTCCAAGCTaGGTGCTGTGGGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LWLLRLLGLLWLLPGSDILGAPS*VLWVGG
Trigger: CCCACCTACCCACAGCACCCAGCTTGGAGCCCCCAG...AATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTGGACTGTTGCTGAGGTaGCTGTTGCGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGGLLLR*LLRLLR
Trigger: CCTCAGCAGCCGCAACAGCCACCTCAGCAACAGTCC...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp CTGTGGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTAGCTGGGAACACAGCTaGAGGGGGAGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LWLLRLLGLLWLLPGSDISWEHS*RGRRRA
Trigger: AGCCCTGCGCCTCCCCCTCCAGCTGTGTTCCCAGCT...AATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAAGGGACCCATTCATCTaGCCGCCCAGGAGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKRDPFI*PPRSPY
Trigger: GTAGGGGCTCCTGGGCGGCCAGATGAATGGGTCCCT...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGGGGGAGAATAATAAATaGGGCCGGCGTCCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLGENNK*GRRPRG
Trigger: CCCGCGCGGACGCCGGCCTCATTTATTATTCTCCCC...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR TCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGTCCTCAGGGTCTCGATaGTGTCGGCGTTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLSSGSR*CRRWCG
Trigger: GCCGCACCAACGCCGACATCATCGAGACCCTGAGGA...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR TCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCGGGTCCGTGAGGGATaGTGTCACCAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGRVREG*CHQGRG
Trigger: ACCCCTTCCCTGGTGACATCATCCCTCACGGACCCG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGGAGGCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGGGGAAGCCCGAGCACTaGCGTAGCCATTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: EEARGSPSTDVAIPNRAGGKPEH*RSHSQQ
Trigger: CTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCC...CCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGCCTCCTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGCTGTTGCCAGGCAGTaGCATTGCCTAGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKAVARQ*HCLATA
Trigger: GGCTGTCGCTAGGCAATGTCACTGCCTGGCAACAGC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGGAGGCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGGCTGTTGCCAGGCAGTaGCATTGCCTAGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: EEARGSPSTDVAIPNRAGAVARQ*HCLATA
Trigger: GGCTGTCGCTAGGCAATGTCACTGCCTGGCAACAGC...CCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACCCCGGCTGGGCTGCTaGGACCATCGCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGPRLGC*DHRQAQ
Trigger: CTGAGCCTGGCGATGGTCTCAGCAGCCCAGCCGGGG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAGGGCTGGCGTCAACTaGGGGGTGGGGAGCTATTGC +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLRAGVN*GVGSYC
Trigger: GCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCT...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCGGTAGCCCTCGCCCCTaGTCCGGGGGATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGGSPRP*SGGSST
Trigger: TGTTGAAGATCCCCCGGACCAGGGGCGAGGGCTACC...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR CCA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGGGTAGCCCTCGCCCCTaGTCCGGGGGATCTTCAACA +
Preference number: 4 (lower is better)
Translates to: QGAARDEVAERYRDQVGLGSPRP*SGGSST
Trigger: TGTTGAAGATCCCCCGGACCAGGGGCGAGGGCTACC...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGCTGAGGAGGGGAGGGGCTCGCTaGGTGGTGGGTCTCGGCACA +
Preference number: 4 (lower is better)
Translates to: ARDEVAERYRDQVGLLLRRGGAR*VVGLGT
Trigger: TGTGCCGAGACCCACCACCCAGCGAGCCCCTCCCCT...CCTCAGCAACAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGGTCGGGCTTGCGGCTaGGGGCTCCAAGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGGRACG*GLQAGC
Trigger: GCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGGTCGGGCTTGCGGCTaGGGGCTCCAAGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLGRACG*GLQAGC
Trigger: GCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCTCAGCCTCAGGCTCTaGGGCTGGGCGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLLSLRL*GWAQQA
Trigger: GGCCTGCTGCGCCCAGCCCCAGAGCCTGAGGCTGAG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACTCAGCCTCAGGCTCTaGGGCTGGGCGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGLSLRL*GWAQQA
Trigger: GGCCTGCTGCGCCCAGCCCCAGAGCCTGAGGCTGAG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTCCAAGAGCAAGGAGGTaGGGTCAGGAGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGPRARR*GQEQKE
Trigger: CTCCTTCTGCTCCTGACCCCACCTCCTTGCTCTTGG...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368240.6
3UTR CAA 72 bp TTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTaGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTA +
Preference number: 4 (lower is better)
Translates to: FPAWEVMTRRSG*RLGAPSWVLWV
Trigger: TACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR CAA 72 bp TACAGGGACCAGGTGGGACTGTTGCTGAGGTGGCTGTaGCGGCTGCTGAGGCTGCTGTGGCTGTGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: YRDQVGLLLRWL*RLLRLLWLWLL
Trigger: CAGCAGCCACAGCCACAGCAGCCTCAGCAGCCGCAACAGCCACCTCAGCAACAGTCCCACCTGGTCCCTGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGGAGCCGCGGGTCCGTaGGGGATGATGTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLGAAGP*GMMSPG
Trigger: CCCTGGTGACATCATCCCTCACGGACCCGCGGCTCC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGGGGAAGCCCGAGCACTaGCGTAGCCATTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: QGAARDEVAERYRDQVGLGKPEH*RSHSQQ
Trigger: CTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCC...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGGGAAGGGCGGGCGGTaGGATTGTCAACTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKGKGGR*DCQLFI
Trigger: GATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACTCGCAGGTCGGGCTTaGGGCTGGGGGCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGLAGRA*GWGLQA
Trigger: AGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR GCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGGCTCAATTTGCCCCCTaGCTAGCCCTTCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLAQFAP*LALLPS
Trigger: GGAGGGCAGAAGGGCTAGGCAGGGGGCAAATTGAGC...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCGGGAGGGGCTCAATTTaGCCCCTGCCTAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGGRGSI*PLPSPS
Trigger: AGAAGGGCTAGGCAGGGGGCAAATTGAGCCCCTCCC...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGAGGCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGTTAGGCTGTTGCCATTaGCCACAGGGAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EEARGSPSTDVAIPNRAGLGCCH*PQGGGQ
Trigger: CTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAA...CCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp TTGGCAGGGATGACCTTGTTTAGGCTGTTGCCATTGGCCACAGGGAGGAGGCCAGGTCGGGCTTGCGGCTaGGGGCTCCAAGCTGGGTGC +
Preference number: 4 (lower is better)
Translates to: LAGMTLFRLLPLATGRRPGRACG*GLQAGC
Trigger: GCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACC...TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGAGAAGGGGAGGCCCTaGCTGAGTAAACTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKEKGRP*LSKLGV
Trigger: AACGCCGAGTTTACTCAGCCAGGGCCTCCCCTTCTC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTGACTTGATGCTGATGTaGGGGTGGGTGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGDLMLM*GWVVTV
Trigger: CACAGTCACCACCCACCCCCACATCAGCATCAAGTC...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGGAATCAGCGCAGGTGTaGCACGTGTGTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLESAQV*HVCVQG
Trigger: CCCCTGCACACACACGTGCCACACCTGCGCTGATTC...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCAGGTGGGATGCAGCCTaGAGGTGGTGGGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGRWDAA*RWWDKE
Trigger: CTCCTTGTCCCACCACCTCCAGGCTGCATCCCACCT...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCGGGGCCTGCCCCCTCTaGTTTGATCTCCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGGACPL*FDLQSC
Trigger: GCAGGATTGGAGATCAAACCAGAGGGGGCAGGCCCC...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAACTTGGGCAGAGGAGCTaGGCTTGTGTGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKLGQRS*ACVKEW
Trigger: CCACTCCTTCACACAAGCCCAGCTCCTCTGCCCAAG...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAAAGCTGTGGGAAACCTaGGGAGGGGGAGGGCCATTA +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKKLWET*GGGGPL
Trigger: TAATGGCCCTCCCCCTCCCCAGGTTTCCCACAGCTT...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTCTTACACTGTGCTCATaGACGGTCTGGGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGLTLCS*TVWEQC
Trigger: GCACTGTTCCCAGACCGTTCATGAGCACAGTGTAAG...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGTCACCAGGGAAGGGGTaGCCAGGGAGCCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLSPGKG*PGSRWD
Trigger: ATCCCAGCGGCTCCCTGGTCACCCCTTCCCTGGTGA...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGCTGAGGAGGTGGGACTGTTGCTaGGGTGGCTGTTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARDEVAERYRDQVGLLLRRWDCC*GGCCGC
Trigger: GCAGCCGCAACAGCCACCTCAGCAACAGTCCCACCT...CCTCAGCAACAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCTGGGGACACCGGTTCTaGCTTGATGCTGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGWGHRF*LDADVG
Trigger: CCCCACATCAGCATCAAGTCAGAACCGGTGTCCCCA...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCAGACCATCCCAGTGTTaGCTCCCCCAGGTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGRPSQC*LPQVVC
Trigger: GCACACTACCTGGGGGAGTCAACACTGGGATGGTCT...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGTGTGCAGCGCCTCGATaGTGTCGGCGTTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLCAAPR*CRRWCG
Trigger: GCCGCACCAACGCCGACATCATCGAGGCGCTGCACA...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGATGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGWEGST*RARHLS
Trigger: GGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCA...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGTGGGGCAGACAGTCTaGCTGGCCACGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGVGQTV*LATSPQ
Trigger: CTGGGGTGACGTGGCCAGGCAGACTGTCTGCCCCAC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAATCCCTGTGCTTCTTGTaGAGCGCCTCGATGATGTCG +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKSLCFL*SASMMS
Trigger: CGACATCATCGAGGCGCTGCACAAGAAGCACAGGGA...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464356.6
CDS-3UTR CCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGAGCCTCCAGCCCGGCTaGGGGAACGGTGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLSLQPG*GNGVVT
Trigger: CGTGACAACACCGTTCCCCCAGCCGGGCTGGAGGCT...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGCACTAGCTGGCCGCTaGGGCAGGCCAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLALAGR*GRPGDT
Trigger: TGTGTCTCCTGGCCTGCCCCAGCGGCCAGCTAGTGC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCTTAGGCTGTTGCCATTaGCCACAGGGAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGLGCCH*PQGGGQ
Trigger: CTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAA...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAAACCCCTTTCCTGCCTaGGAAGTGATGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKNPFPA*EVMTRR
Trigger: CCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTT...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAAGCTGGGAACACAGCTaGAGGGGGAGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGSWEHS*RGRRRA
Trigger: AGCCCTGCGCCTCCCCCTCCAGCTGTGTTCCCAGCT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAGCACCCACACACCTTaGGGGTGCAGCACACACAAG +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLSTHTP*GCSTHK
Trigger: CTTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCT...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCCACCTCCCTCCCTCTaGAGAATGGGGAAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGPPPSL*RMGKRR
Trigger: TCTCCTCTTCCCCATTCTCCAGAGGGAGGGAGGTGG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCTGGGGGCGGGCTGTTaGTTTGTGGGGGCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLLGAGC*FVGAGS
Trigger: ACTGCCTGCCCCCACAAACCAACAGCCCGCCCCCAG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000360595.7
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACCGGGGCCGAGCGCCTaGGCCGCCTCGGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKPGPSA*AASAVV
Trigger: AACAACAGCCGAGGCGGCTCAGGCGCTCGGCCCCGG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR TCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGGGGGAGAATAATAAATaGGGCCGGCGTCCGCGCGGG +
Preference number: 4 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLGENNK*GRRPRG
Trigger: CCCGCGCGGACGCCGGCCTCATTTATTATTCTCCCC...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGGGTTCCGCTCGTCGGTaGTTCGCTGGATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: QGAARDEVAERYRDQVGLGSARR*FAGSES
Trigger: AGATTCAGATCCAGCGAATCACCGACGAGCGGAACC...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGTCCTCAGGGTCTCGATaGTGTCGGCGTTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLSSGSR*CRRWCG
Trigger: GCCGCACCAACGCCGACATCATCGAGACCCTGAGGA...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGGCTGTCGCAGCCGTTaGAGCCCTTCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGGCRSR*SPSSSG
Trigger: CCCTGAGGAAGAAGGGCTTCAACGGCTGCGACAGCC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
CDS-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCCCCCGGCTGGGCTGCTaGGACCATCGCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPPRLGC*DHRQAQ
Trigger: CTGAGCCTGGCGATGGTCTCAGCAGCCCAGCCGGGG...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCCCCCGGCTGGGCTGCTaGGACCATCGCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: HFNVQVSSRILFTAEPSAPRLGC*DHRQAQ
Trigger: CTGAGCCTGGCGATGGTCTCAGCAGCCCAGCCGGGG...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGGGAGGGCCATTAGATaGCTCCAGTGGTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKGRAIR*LQWLLW
Trigger: CCAAAGTAACCACTGGAGTCATCTAATGGCCCTCCC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACCCCAGGAGTGTGGGTaGTTGTCAGGTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGPQECG*LSGVGV
Trigger: CACCCCCACACCTGACAATCACCCACACTCCTGGGG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCCCCCCACCCCCTTCCTaGAGCATATGTGTACAACGT +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGPPPPS*SICVQR
Trigger: ACGTTGTACACATATGCTGCAGGAAGGGGGTGGGGG...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGCCCCCACCCCCTTCCTaGAGCATATGTGTACAACGT +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLPPPPS*SICVQR
Trigger: ACGTTGTACACATATGCTGCAGGAAGGGGGTGGGGG...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAATTTGATCTCCAATCCTaGCTGAGGTCTCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKFDLQS*LRSQDP
Trigger: GGGGTCCTGAGACCTCAGGCAGGATTGGAGATCAAA...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGGGGCTCGCTGGGTGGTaGGTCTCGGCACACCTTACA +
Preference number: 4 (lower is better)
Translates to: SRYQAASSSQLSPQPQALGLAGW*VSAHLT
Trigger: TGTAAGGTGTGCCGAGACCCACCACCCAGCGAGCCC...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGGGCTCGCTGGGTGGTaGGTCTCGGCACACCTTACA +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGGLAGW*VSAHLT
Trigger: TGTAAGGTGTGCCGAGACCCACCACCCAGCGAGCCC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGGGGCTCGCTGGGTGGTaGGTCTCGGCACACCTTACA +
Preference number: 4 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLGLAGW*VSAHLT
Trigger: TGTAAGGTGTGCCGAGACCCACCACCCAGCGAGCCC...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACGTCGAGCTCCTCGCTaGCGCGTCGGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGRRAPR*RVGTCP
Trigger: AGGACAAGTACCGACGCGCCAGCGAGGAGCTCGACG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
CDS-3UTR CCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGCGTCGAGCTCCTCGCTaGCGCGTCGGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLRRAPR*RVGTCP
Trigger: AGGACAAGTACCGACGCGCCAGCGAGGAGCTCGACG...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp CTGTGGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTAACCCCTTTCCTGCCTaGGAAGTGATGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: LWLLRLLGLLWLLPGSDINPFPA*EVMTRR
Trigger: CCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTT...AATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAACTGTGTTGTAGGCAGTaGGCATGGAAGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKLCCRQ*AWKRRG
Trigger: TCCCCTTCTCTTCCATGCCCACTGCCTACAACACAG...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGTGTGCAGGGGCATTTaGGGGCCAGGCTTAAGTATT +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKVCRGI*GPGLSI
Trigger: AATACTTAAGCCTGGCCCCCAAATGCCCCTGCACAC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGACTCTACTCTCCAACTaGGAGGAAACCCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLTLLSN*EETPRG
Trigger: CCCCCTTGGGGTTTCCTCCCAGTTGGAGAGTAGAGT...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCAGGCCCCTCTGCTTCTaGTTCCTTCCCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGRPLCF*FLPCIK
Trigger: CTTGATGCAGGGAAGGAACCAGAAGCAGAGGGGCCT...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGGTGGACATATGTGGGTaGAAGCAGAGGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLVDICG*KQRSLE
Trigger: CTCCAGGGACCTCTGCTTCCACCCACATATGTCCAC...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGTGGACACGGGCACCGTaGCAGGCATGGCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLWTRAP*QAWQSW
Trigger: CCAACTTTGCCATGCCTGTCACGGTGCCCGTGTCCA...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGATGGACACGGGCACCGTaGCAGGCATGGCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGWTRAP*QAWQSW
Trigger: CCAACTTTGCCATGCCTGTCACGGTGCCCGTGTCCA...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGGGAAGCCCGAGCACTaGCGTAGCCATTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGGKPEH*RSHSQQ
Trigger: CTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGCTGTTGCCAGGCAGTaGCATTGCCTAGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGAVARQ*HCLATA
Trigger: GGCTGTCGCTAGGCAATGTCACTGCCTGGCAACAGC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGGCTGTTGCCAGGCAGTaGCATTGCCTAGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: SRYQAASSSQLSPQPQALAVARQ*HCLATA
Trigger: GGCTGTCGCTAGGCAATGTCACTGCCTGGCAACAGC...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCTACAGAAAGAGGGGATaGGAGCATCCCCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGYRKRG*EHPPLQ
Trigger: TTGGAGAGGGGGATGCTCTCATCCCCTCTTTCTGTA...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCCACACTCGCCCCAATaGAAGAGCTCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLPHSPQ*KSSGLE
Trigger: CTCCAGGCCAGAGCTCTTTCATTGGGGCGAGTGTGG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGCTGCAGGATACCTTCTaGACAGCCTCCAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLLQDTF*TASSPA
Trigger: AGCCGGGCTGGAGGCTGTGCAGAAGGTATCCTGCAG...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATACCCCGTGCTTCGGCTaGCCCTGGGCCCCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHTPCFG*PWAPCP
Trigger: TGGGCAAGGGGCCCAGGGGCAGCCGAAGCACGGGGT...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGAGACCCCAAGGCGCTaGGCATTGTTCAGATCTAAA +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKETPRR*ALFRSK
Trigger: TTTAGATCTGAACAATGCCCAGCGCCTTGGGGTCTC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR CCA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGCTCAGGCTCTGGGGCTaGGCGCAGCAGGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQLRLWG*AQQAQC
Trigger: ACACTGGGCCTGCTGCGCCCAGCCCCAGAGCCTGAG...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGCTCAGCCTCAGGCTCTaGGGCTGGGCGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWLSLRL*GWAQQA
Trigger: GGCCTGCTGCGCCCAGCCCCAGAGCCTGAGGCTGAG...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGCACAAGAAAGGAAGTaGGGGTCGAGCGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGAQERK*GSSGRS
Trigger: GCTCCTCCCGCTCGACCCCCACTTCCTTTCTTGTGC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCCAGCTTTACAGGGCTaGCGTCAACTGAGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLPALQG*RQLRGG
Trigger: CCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGATGCAGCCTGGAGGTaGTGGGACAAGGAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGDAAWR*WDKEVA
Trigger: GGCTACCTCCTTGTCCCACCACCTCCAGGCTGCATC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGAGGTGGGATGCAGCCTaGAGGTGGTGGGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: SRYQAASSSQLSPQPQALRWDAA*RWWDKE
Trigger: CTCCTTGTCCCACCACCTCCAGGCTGCATCCCACCT...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368240.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAGGGCGCCGCACCCCTTaGGCAGAGGAGCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKGRRTP*AEELGL
Trigger: CAAGCCCAGCTCCTCTGCCCAAGGGGTGCGGCGCCC...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGGGCGCCGCACCCCTTaGGCAGAGGAGCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVGRRTP*AEELGL
Trigger: CAAGCCCAGCTCCTCTGCCCAAGGGGTGCGGCGCCC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACCAGGGCTGTGGAGCTaGAGCAGCCAACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGPGLWS*SSQLSL
Trigger: AAGGGAGAGTTGGCTGCTCCAGCTCCACAGCCCTGG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAACTAAGTGGACATATGTaGGTGGAAGCAGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKLSGHM*VEAEVP
Trigger: AGGGACCTCTGCTTCCACCCACATATGTCCACTTAG...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAAGCCTGCAGGAGAGGTaGGAAGGCTGGACGTGCTGT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGSLQER*EGWTCC
Trigger: ACAGCACGTCCAGCCTTCCCACCTCTCCTGCAGGCT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCTTCAGAGGGAGTGGGTaGAGGCGAATTTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGFRGSG*RRIWLE
Trigger: CTCAAGCCAAATTCGCCTCCACCCACTCCCTCTGAA...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACAGGCATGGCAAAGTTaGGGGCCGGGACAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGQAWQS*GPGQLR
Trigger: CCTCAACTGTCCCGGCCCCCAACTTTGCCATGCCTG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000464356.6
3UTR CAA 72 bp TGGGTAGGTGGGGGTGGAGACTTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTGGCCACAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: WVGGGGDLAGMT*FRLLPLATGRR
Trigger: CCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAAGTCTCCACCCCCACCTACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGTGATTCGCTGGATCTaGATCTTTTTCCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKVIRWI*IFFLPI
Trigger: GATGGGGAGGAAAAAGATTCAGATCCAGCGAATCAC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGGAGCCGCGGGTCCGTaGGGGATGATGTCACCAGGG +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEGAAGP*GMMSPG
Trigger: CCCTGGTGACATCATCCCTCACGGACCCGCGGCTCC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGGGAAGGGCGGGCGGTaGGATTGTCAACTCTTCATC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGGKGGR*DCQLFI
Trigger: GATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCTGCCCCCTCTGGTTTaGTCTCCAATCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLLPPLV*SPILPE
Trigger: CTCAGGCAGGATTGGAGATCAAACCAGAGGGGGCAG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCTGGGAGGGCTCCACATaGAGGGCTCGGCACCTGTCC +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPWEGST*RARHLS
Trigger: GGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCA...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGAGGGGAGGGGCTCGCTaGGTGGTGGGTCTCGGCACA +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVRGGAR*VVGLGT
Trigger: TGTGCCGAGACCCACCACCCAGCGAGCCCCTCCCCT...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGATTAGGCTGTTGCCATTaGCCACAGGGAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGLGCCH*PQGGGQ
Trigger: CTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAA...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp GCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGCTGAGGAACCCCTTTCCTGCCTaGGAAGTGATGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ARDEVAERYRDQVGLLLRNPFPA*EVMTRR
Trigger: CCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTT...CCTCAGCAACAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp TTGGCAGGGATGACCTTGTTTAGGCTGTTGCCATTGGCCACAGGGAGGAGGCCAGGACTGTTGCTGAGGTaGCTGTTGCGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LAGMTLFRLLPLATGRRPGLLLR*LLRLLR
Trigger: CCTCAGCAGCCGCAACAGCCACCTCAGCAACAGTCC...TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCTCAGGGCGGGCAGCTaGGAACACAGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVLRAGS*EHSWRG
Trigger: CCCCCTCCAGCTGTGTTCCCAGCTGCCCGCCCTGAG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACTCAGGCTCTGGGGCTaGGCGCAGCAGGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKLRLWG*AQQAQC
Trigger: ACACTGGGCCTGCTGCGCCCAGCCCCAGAGCCTGAG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAACCATCAAGCCCACTTTaGGGTTTCAGTCTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKPSSPL*GFSLEC
Trigger: ACACTCTAGACTGAAACCCCAAAGTGGGCTTGATGG...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGTCTCCCTGCACACTGTaGCCAGCTTTACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLSPCTL*PALQGW
Trigger: CCAGCCCTGTAAAGCTGGCCACAGTGTGCAGGGAGA...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACCAATGAAAGAGCTCTaGCCTGGAGCACCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGPMKEL*PGAPQG
Trigger: TCCCTGGGGTGCTCCAGGCCAGAGCTCTTTCATTGG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCCAAGAGCAAGGAGGTaGGGTCAGGAGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLPRARR*GQEQKE
Trigger: CTCCTTCTGCTCCTGACCCCACCTCCTTGCTCTTGG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp CTGTGGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTGTGATTCGCTGGATCTaGATCTTTTTCCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: LWLLRLLGLLWLLPGSDIVIRWI*IFFLPI
Trigger: GATGGGGAGGAAAAAGATTCAGATCCAGCGAATCAC...AATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGGTGATTCGCTGGATCTaGATCTTTTTCCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLVIRWI*IFFLPI
Trigger: GATGGGGAGGAAAAAGATTCAGATCCAGCGAATCAC...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAAGCCGCTGGGATTGCTaGACTGCAGTGAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGSRWDC*TAVSSD
Trigger: ATCAGAGCTCACTGCAGTTCAGCAATCCCAGCGGCT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGCTGAGGGAGACTTGGCAGGGATaGCCTTGTTTAGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: ARDEVAERYRDQVGLLLRETWQG*PCLGCC
Trigger: GCAACAGCCTAAACAAGGTCATCCCTGCCAAGTCTC...CCTCAGCAACAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGAGGGGAGGCCCTGGCTaGGTAAACTCGGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRRGGPG*VNSALP
Trigger: TGGCAACGCCGAGTTTACTCAGCCAGGGCCTCCCCT...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCTGTGTCAAGTGTGGGTaGCTAAGTGGACATATGTGG +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGCVKCG*LSGHMW
Trigger: CCACATATGTCCACTTAGTCACCCACACTTGACACA...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAGAGGCGAATTTGGCTTaGGAGGAAGAAGACATTAAG +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKEANLA*EEEDIK
Trigger: CTTAATGTCTTCTTCCTCTCAAGCCAAATTCGCCTC...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAATGGGCATTGTTCAAGTaGTGCATTAACCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKWALFK*CINPFP
Trigger: AGGAAAGGGGTTAATGCATCACTTGAACAATGCCCA...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACTTTCCCTCCAAATGTaGTTCCAGAGAGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGLSLQM*FQRGPH
Trigger: GTGGGGGCCTCTCTGGAAGCACATTTGGAGGGAAAG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGGTGGGGCAGACAGTCTaGCTGGCCACGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWVGQTV*LATSPQ
Trigger: CTGGGGTGACGTGGCCAGGCAGACTGTCTGCCCCAC...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCATTCCTTCTACCAACTaGTTTAAGGGGTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGIPSTN*FKGWGE
Trigger: CTCTCCCCACCCCTTAAAGCAGTTGGTAGAAGGAAT...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGCGTCGAGCTCCTCGCTaGCGCGTCGGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQRRAPR*RVGTCP
Trigger: AGGACAAGTACCGACGCGCCAGCGAGGAGCTCGACG...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAAACCCCTTTCCTGCCTaGGAAGTGATGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGNPFPA*EVMTRR
Trigger: CCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGACTTGATGCTGATGTaGGGGTGGGTGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLDLMLM*GWVVTV
Trigger: CACAGTCACCACCCACCCCCACATCAGCATCAAGTC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGACTTGATGCTGATGTaGGGGTGGGTGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGDLMLM*GWVVTV
Trigger: CACAGTCACCACCCACCCCCACATCAGCATCAAGTC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGAGCTGGGAACACAGCTaGAGGGGGAGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIESWEHS*RGRRRA
Trigger: AGCCCTGCGCCTCCCCCTCCAGCTGTGTTCCCAGCT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGGGCAGACAGTCTGCCTaGCCACGTCACCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWGRQSA*PRHPRP
Trigger: TGGCCTGGGGTGACGTGGCCAGGCAGACTGTCTGCC...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGTCCCTGCATCAAGTATaGGAATACTGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLSLHQV*EYCKRL
Trigger: CAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGA...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACTTACACTGTGCTCATaGACGGTCTGGGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGLTLCS*TVWEQC
Trigger: GCACTGTTCCCAGACCGTTCATGAGCACAGTGTAAG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAATCCTCAGGGTCTCGATaGTGTCGGCGTTGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKSSGSR*CRRWCG
Trigger: GCCGCACCAACGCCGACATCATCGAGACCCTGAGGA...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR TCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGATTGCTGAACTGCAGTaGGCTCTGATTGGACACGGG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLIAELQ*ALIGHG
Trigger: CCCGTGTCCAATCAGAGCTCACTGCAGTTCAGCAAT...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAATTGCTGAACTGCAGTaGGCTCTGATTGGACACGGG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGIAELQ*ALIGHG
Trigger: CCCGTGTCCAATCAGAGCTCACTGCAGTTCAGCAAT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGAGACTTGGCAGGGATaGCCTTGTTTAGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLETWQG*PCLGCC
Trigger: GCAACAGCCTAAACAAGGTCATCCCTGCCAAGTCTC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGAGGGGAGGCCCTGGCTaGGTAAACTCGGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIERGGPG*VNSALP
Trigger: TGGCAACGCCGAGTTTACTCAGCCAGGGCCTCCCCT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGAGGTGGGACTGTTGCTaGGGTGGCTGTTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWRWDCC*GGCCGC
Trigger: GCAGCCGCAACAGCCACCTCAGCAACAGTCCCACCT...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGCCACACTCGCCCCAATaGAAGAGCTCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRPHSPQ*KSSGLE
Trigger: CTCCAGGCCAGAGCTCTTTCATTGGGGCGAGTGTGG...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACACCAGATGCCCTCATaGACACACTCAGGTACACGT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGHQMPS*THSGTR
Trigger: ACGTGTACCTGAGTGTGTTCATGAGGGCATCTGGTG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGGAGGCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGCAACTGGTAATCAAGTaGTGCATTAACCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: EEARGSPSTDVAIPNRAGQLVIK*CINPFP
Trigger: AGGAAAGGGGTTAATGCATCACTTGATTACCAGTTG...CCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR GCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGACGGTCTGGGAACAGTaGTCAGTTCATGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLTVWEQ*SVHGLQ
Trigger: CTGCAGACCATGAACTGAGCACTGTTCCCAGACCGT...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAACGGTCTGGGAACAGTaGTCAGTTCATGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGTVWEQ*SVHGLQ
Trigger: CTGCAGACCATGAACTGAGCACTGTTCCCAGACCGT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR GCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCCTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLPCLGC*HWPQGG
Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACCTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGPCLGC*HWPQGG
Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR GCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGCCTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLPCLGC*HWPQGG
Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGG...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR GCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGCCTTTTCAGAACCTCTaGCTCACTTTCCCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLPFQNL*LTFPLK
Trigger: TTTCAAGGGGAAAGTGAGGCAGAGGTTCTGAAAAGG...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCGTATTCTGCTCCATGTaGCTATGGCTACATGAACAC +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGVFCSM*LWLHEH
Trigger: GTGTTCATGTAGCCATAGGCACATGGAGCAGAATAC...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACACACACCTTGGGGGTaGAGCACACACAAGAATCAG +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGHTPWG*STHKNQ
Trigger: CTGATTCTTGTGTGTGCTGCACCCCCAAGGTGTGTG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGAGCAGGCTGGGGGCCTaGCCCCTCTGGTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVSRLGA*PLWFDL
Trigger: GAGATCAAACCAGAGGGGGCAGGCCCCCAGCCTGCT...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCGTCGAGCTCCTCGCTaGCGCGTCGGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVRRAPR*RVGTCP
Trigger: AGGACAAGTACCGACGCGCCAGCGAGGAGCTCGACG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCCAGGCATGGCAAAGTTaGGGGCCGGGACAGTTGACC +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPQAWQS*GPGQLT
Trigger: GGTCAACTGTCCCGGCCCCCAACTTTGCCATGCCTG...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGGGACTGTTGCTGAGGTaGCTGTTGCGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRGLLLR*LLRLLR
Trigger: CCTCAGCAGCCGCAACAGCCACCTCAGCAACAGTCC...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTGGCAGGGATGACCTTGTTTAGGCTGTTGCCATTGGCCACAGGGAGGAGGCCAGACTTGATGCTGATGTaGGGGTGGGTGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: LAGMTLFRLLPLATGRRPDLMLM*GWVVTV
Trigger: CACAGTCACCACCCACCCCCACATCAGCATCAAGTC...TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CCA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGATGCAGCCTGGAGGTaGTGGGACAAGGAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQDAAWR*WDKEVA
Trigger: GGCTACCTCCTTGTCCCACCACCTCCAGGCTGCATC...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368240.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATAGGGACCCATTCATCTaGCCGCCCAGGAGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHRDPFI*PPRSPY
Trigger: GTAGGGGCTCCTGGGCGGCCAGATGAATGGGTCCCT...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGGGTGATTGTCAGGTGTaGGGGTGGGGCACCTCCATG +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRGDCQV*GWGTSM
Trigger: CATGGAGGTGCCCCACCCCCACACCTGACAATCACC...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGGTGATTGTCAGGTGTaGGGGTGGGGCACCTCCATG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPGDCQV*GWGTSM
Trigger: CATGGAGGTGCCCCACCCCCACACCTGACAATCACC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGATATTTCTCTTCCGTCTaGGGGGTCAGGGCAAACACC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGYFSSV*GVRANT
Trigger: GGTGTTTGCCCTGACCCCCCAGACGGAAGAGAAATA...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000464356.6
CDS-3UTR TCA 90 bp GCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGTTGCTGAGGGTGATTCGCTGGATCTaGATCTTTTTCCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: ARDEVAERYRDQVGLLLRVIRWI*IFFLPI
Trigger: GATGGGGAGGAAAAAGATTCAGATCCAGCGAATCAC...CCTCAGCAACAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp TTGGCAGGGATGACCTTGTTTAGGCTGTTGCCATTGGCCACAGGGAGGAGGCCACAAACTTCCGCTTGGTaGAAGTCACCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: LAGMTLFRLLPLATGRRPQTSAW*KSPVGS
Trigger: GGAACCGACAGGTGACTTTCACCAAGCGGAAGTTTG...TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCAACTGCAGTGAGCTCTaGTTGGACACGGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPNCSEL*LDTGTV
Trigger: CACGGTGCCCGTGTCCAATCAGAGCTCACTGCAGTT...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACATCACCAGGGAAGGGGTaGCCAGGGAGCCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTSPGKG*PGSRWD
Trigger: ATCCCAGCGGCTCCCTGGTCACCCCTTCCCTGGTGA...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAGCTGTTGCCAGGCAGTaGCATTGCCTAGCGACAGCC +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKAVARQ*HCLATA
Trigger: GGCTGTCGCTAGGCAATGTCACTGCCTGGCAACAGC...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGTGGGGACACCGGTTCTaGCTTGATGCTGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRWGHRF*LDADVG
Trigger: CCCCACATCAGCATCAAGTCAGAACCGGTGTCCCCA...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp CACTTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTGGGGACACCGGTTCTaGCTTGATGCTGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: HFNVQVSSRILFTAEPSAWGHRF*LDADVG
Trigger: CCCCACATCAGCATCAAGTCAGAACCGGTGTCCCCA...GGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp TTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGTGGGGACACCGGTTCTaGCTTGATGCTGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: LMSRYQAASSSQLSPQPQWGHRF*LDADVG
Trigger: CCCCACATCAGCATCAAGTCAGAACCGGTGTCCCCA...CTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGGGAAGGGCGGGCGGTaGGATTGTCAACTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPGKGGR*DCQLFI
Trigger: GATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACCACACTCGCCCCAATaGAAGAGCTCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKPHSPQ*KSSGLE
Trigger: CTCCAGGCCAGAGCTCTTTCATTGGGGCGAGTGTGG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGATCTCCAATCCTGCCTaGGGTCTCAGGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVISNPA*GLRTPC
Trigger: GCACGGGGTCCTGAGACCTCAGGCAGGATTGGAGAT...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGGAGCTGGGCTTGTGTaGAGGAGTGGGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHGAGLV*RSGADS
Trigger: ACTGTCTGCCCCACTCCTTCACACAAGCCCAGCTCC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGGAGCTGGGCTTGTGTaGAGGAGTGGGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEGAGLV*RSGADS
Trigger: ACTGTCTGCCCCACTCCTTCACACAAGCCCAGCTCC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCCTTGCCCACTGTCCCTaGAAGCTGTGGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPLAHCP*KLWETW
Trigger: CCAGGTTTCCCACAGCTTTCAGGGACAGTGGGCAAG...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCTGCAGGATACCTTCTaGACAGCCTCCAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVLQDTF*TASSPA
Trigger: AGCCGGGCTGGAGGCTGTGCAGAAGGTATCCTGCAG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGCTCAATTTGCCCCCTaGCTAGCCCTTCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHAQFAP*LALLPS
Trigger: GGAGGGCAGAAGGGCTAGGCAGGGGGCAAATTGAGC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGGGAGGGGCTCAATTTaGCCCCTGCCTAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEGRGSI*PLPSPS
Trigger: AGAAGGGCTAGGCAGGGGGCAAATTGAGCCCCTCCC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGCACAAGAAAGGAAGTaGGGGTCGAGCGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVAQERK*GSSGRS
Trigger: GCTCCTCCCGCTCGACCCCCACTTCCTTTCTTGTGC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGCACAAGAAAGGAAGTaGGGGTCGAGCGGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHAQERK*GSSGRS
Trigger: GCTCCTCCCGCTCGACCCCCACTTCCTTTCTTGTGC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGTGCTCCATGTGCCTATaGCTACATGAACACAAAAAC +
Preference number: 4 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLCSMCL*LHEHKN
Trigger: GTTTTTGTGTTCATGTAGCCATAGGCACATGGAGCA...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAGAATCAGCGCAGGTGTaGCACGTGTGTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKESAQV*HVCVQG
Trigger: CCCCTGCACACACACGTGCCACACCTGCGCTGATTC...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGAATCAGCGCAGGTGTaGCACGTGTGTGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHESAQV*HVCVQG
Trigger: CCCCTGCACACACACGTGCCACACCTGCGCTGATTC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCAGCACCCACACACCTTaGGGGTGCAGCACACACAAG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPSTHTP*GCSTHK
Trigger: CTTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCT...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGCCAATGAAAGAGCTCTaGCCTGGAGCACCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRPMKEL*PGAPQG
Trigger: TCCCTGGGGTGCTCCAGGCCAGAGCTCTTTCATTGG...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGCCAAGAGCAAGGAGGTaGGGTCAGGAGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRPRARR*GQEQKE
Trigger: CTCCTTCTGCTCCTGACCCCACCTCCTTGCTCTTGG...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAGGTGGGATGCAGCCTaGAGGTGGTGGGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKRWDAA*RWWDKE
Trigger: CTCCTTGTCCCACCACCTCCAGGCTGCATCCCACCT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATAGGTGGGATGCAGCCTaGAGGTGGTGGGACAAGGAG +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHRWDAA*RWWDKE
Trigger: CTCCTTGTCCCACCACCTCCAGGCTGCATCCCACCT...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGGAAGCAGAGGTCCCTaGAGGGAGAGACCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHGSRGP*RERPWQ
Trigger: CTGCCAAGGTCTCTCCCTCCAGGGACCTCTGCTTCC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGGGAAGCAGAGGTCCCTaGAGGGAGAGACCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWGSRGP*RERPWQ
Trigger: CTGCCAAGGTCTCTCCCTCCAGGGACCTCTGCTTCC...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGAAGCTGTGGGAAACCTaGGGAGGGGGAGGGCCATTA +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRKLWET*GGGGPL
Trigger: TAATGGCCCTCCCCCTCCCCAGGTTTCCCACAGCTT...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGGTTCCGCTCGTCGGTaGTTCGCTGGATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPGSARR*FAGSES
Trigger: AGATTCAGATCCAGCGAATCACCGACGAGCGGAACC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGAACTGCAGTGAGCTCTaGTTGGACACGGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWNCSEL*LDTGTV
Trigger: CACGGTGCCCGTGTCCAATCAGAGCTCACTGCAGTT...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAACTGCAGTGAGCTCTaGTTGGACACGGGCACCGTG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKNCSEL*LDTGTV
Trigger: CACGGTGCCCGTGTCCAATCAGAGCTCACTGCAGTT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACACGGGTCCGTGAGGGATaGTGTCACCAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTRVREG*CHQGRG
Trigger: ACCCCTTCCCTGGTGACATCATCCCTCACGGACCCG...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCCCGGCTGGGCTGCTaGGACCATCGCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTPRLGC*DHRQAQ
Trigger: CTGAGCCTGGCGATGGTCTCAGCAGCCCAGCCGGGG...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGAGACCATCCCAGTGTTaGCTCCCCCAGGTAGTGTGC +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIERPSQC*LPQVVC
Trigger: GCACACTACCTGGGGGAGTCAACACTGGGATGGTCT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAGGGGCCAAGGAGGAATaGGGGAGGTGGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTGAKEE*GRWDLY
Trigger: GTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCC...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACTTGCCCACTGTCCCTaGAAGCTGTGGGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKLAHCP*KLWETW
Trigger: CCAGGTTTCCCACAGCTTTCAGGGACAGTGGGCAAG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACTCCCCCAGGTAGTGTaGGTGCAAGACCAAGGACGT +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKLPQVV*VQDQGR
Trigger: ACGTCCTTGGTCTTGCACGCACACTACCTGGGGGAG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATCTCCCCCAGGTAGTGTaGGTGCAAGACCAAGGACGT +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHLPQVV*VQDQGR
Trigger: ACGTCCTTGGTCTTGCACGCACACTACCTGGGGGAG...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATTATTGCACCGTGAATTaGAGGGGCCCTCACCCCCAC +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHYCTVN*RGPHPH
Trigger: GTGGGGGTGAGGGCCCCTGCAATTCACGGTGCAATA...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAATCAAAAGCCAGGTTTaGCTTTATGAGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGIKSQV*LYEAEG
Trigger: GCCCTCTGCCTCATAAAGGCAAACCTGGCTTTTGAT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGGTTACTTTGGCAAATaGCCAGTTCTTCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: TLWPALQGWRQLRGGELLGYFGK*PVLQRE
Trigger: CTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGTTAGGCTGTTGCCATTaGCCACAGGGAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIELGCCH*PQGGGQ
Trigger: CTGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAA...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGAGAAGGGGAGGCCCTaGCTGAGTAAACTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVEKGRP*LSKLGV
Trigger: AACGCCGAGTTTACTCAGCCAGGGCCTCCCCTTCTC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGACCATCAAGCCCACTTTaGGGTTTCAGTCTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGPSSPL*GFSLEC
Trigger: ACACTCTAGACTGAAACCCCAAAGTGGGCTTGATGG...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCCAAGAGCAAGGAGGTaGGGTCAGGAGCAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEPRARR*GQEQKE
Trigger: CTCCTTCTGCTCCTGACCCCACCTCCTTGCTCTTGG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATCTTGGGCAGAGGAGCTaGGCTTGTGTGAAGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHLGQRS*ACVKEW
Trigger: CCACTCCTTCACACAAGCCCAGCTCCTCTGCCCAAG...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGTGGACATATGTGGGTaGAAGCAGAGGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPVDICG*KQRSLE
Trigger: CTCCAGGGACCTCTGCTTCCACCCACATATGTCCAC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACACTGGGCGAGGCTCTaGGGACGCATGCATGAACAA +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKHWARL*GRMHEQ
Trigger: TTGTTCATGCATGCGTCCCCAGAGCCTCGCCCAGTG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCTCCTCATCTGAGGTCTaGGTTCCCAGGGACCCATTC +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPSSSEV*VPRDPF
Trigger: GAATGGGTCCCTGGGAACCCAGACCTCAGATGAGGA...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACCACCTCCCTCCCTCTaGAGAATGGGGAAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKPPPSL*RMGKRR
Trigger: TCTCCTCTTCCCCATTCTCCAGAGGGAGGGAGGTGG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCCAAACTTCCGCTTGGTaGAAGTCACCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPQTSAW*KSPVGS
Trigger: GGAACCGACAGGTGACTTTCACCAAGCGGAAGTTTG...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGAGCCGCTGGGATTGCTaGACTGCAGTGAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIESRWDC*TAVSSD
Trigger: ATCAGAGCTCACTGCAGTTCAGCAATCCCAGCGGCT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAGCCGCTGGGATTGCTaGACTGCAGTGAGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKSRWDC*TAVSSD
Trigger: ATCAGAGCTCACTGCAGTTCAGCAATCCCAGCGGCT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACCCCGGCTGGGCTGCTaGGACCATCGCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITPRLGC*DHRQAQ
Trigger: CTGAGCCTGGCGATGGTCTCAGCAGCCCAGCCGGGG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCACAGTACGGGCCGTTTaGGTCATTATTATTACAATA +
Preference number: 4 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGTVRAV*VIIITI
Trigger: TATTGTAATAATAATGACTCAAACGGCCCGTACTGT...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGATGGGCATTGTTCAAGTaGTGCATTAACCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGWALFK*CINPFP
Trigger: AGGAAAGGGGTTAATGCATCACTTGAACAATGCCCA...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCTCGCAGGTCGGGCTTaGGGCTGGGGGCTCCAAGCT +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTLAGRA*GWGLQA
Trigger: AGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAG...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGTATTCTGCTCCATGTaGCTATGGCTACATGAACAC +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGVFCSM*LWLHEH
Trigger: GTGTTCATGTAGCCATAGGCACATGGAGCAGAATAC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCCACACACCTTGGGGGTaGAGCACACACAAGAATCAG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPHTPWG*STHKNQ
Trigger: CTGATTCTTGTGTGTGCTGCACCCCCAAGGTGTGTG...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCTTTCCCTCCAAATGTaGTTCCAGAGAGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIELSLQM*FQRGPH
Trigger: GTGGGGGCCTCTCTGGAAGCACATTTGGAGGGAAAG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAGGGGTGGGGAGCTATTaGACTGTATATCTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGGVGSY*TVYLRE
Trigger: TTCTCTAAGATATACAGTGCAATAGCTCCCCACCCC...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAGTACACGTGTGTACCTaGGTAGAGGCCCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKVHVCT*VEAPLL
Trigger: AAGCAGAGGGGCCTCTACGCAGGTACACACGTGTAC...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGTACACGTGTGTACCTaGGTAGAGGCCCCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHVHVCT*VEAPLL
Trigger: AAGCAGAGGGGCCTCTACGCAGGTACACACGTGTAC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCTGGGGGCTCCAAGCTaGGTGCTGTGGGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGLGAPS*VLWVGG
Trigger: CCCACCTACCCACAGCACCCAGCTTGGAGCCCCCAG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAACCCCTTTCCTGCCTaGGAAGTGATGACTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKNPFPA*EVMTRR
Trigger: CCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGAGCTGGGAACACAGCTaGAGGGGGAGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGSWEHS*RGRRRA
Trigger: AGCCCTGCGCCTCCCCCTCCAGCTGTGTTCCCAGCT...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTCAGCCTCAGGCTCTaGGGCTGGGCGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLSLRL*GWAQQA
Trigger: GGCCTGCTGCGCCCAGCCCCAGAGCCTGAGGCTGAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGTGTGCAGGGGCATTTaGGGGCCAGGCTTAAGTATT +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPVCRGI*GPGLSI
Trigger: AATACTTAAGCCTGGCCCCCAAATGCCCCTGCACAC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAAACAAGATTACACCCTaGCTTCTTTCAAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGNKITP*LLSSPG
Trigger: TCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGTCCTCATCTGAGGTCTaGGTTCCCAGGGACCCATTC +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIESSSEV*VPRDPF
Trigger: GAATGGGTCCCTGGGAACCCAGACCTCAGATGAGGA...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCTTCAGAGGGAGTGGGTaGAGGCGAATTTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPFRGSG*RRIWLE
Trigger: CTCAAGCCAAATTCGCCTCCACCCACTCCCTCTGAA...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTGGCAGGGATGACCTTGTTTAGGCTGTTGCCATTGGCCACAGGGAGGAGGCCAAGGAGAGCTCTGCACTaGTCAACTGGTAATCAAGTG +
Preference number: 4 (lower is better)
Translates to: LAGMTLFRLLPLATGRRPRRALH*STGNQV
Trigger: CACTTGATTACCAGTTGACCAGTGCAGAGCTCTCCT...TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
3UTR CAA 72 bp GCTTCTTTCAAGCCCTGGATCGAGGCTCATCAGTTTTaGAAACTCCGTCTAGAAGCCTGCAGGAGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: ASFKPWIEAHQF*KLRLEACRRGG
Trigger: CCCACCTCTCCTGCAGGCTTCTAGACGGAGTTTCAAAAACTGATGAGCCTCGATCCAGGGCTTGAAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCTTACACTGTGCTCATaGACGGTCTGGGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIELTLCS*TVWEQC
Trigger: GCACTGTTCCCAGACCGTTCATGAGCACAGTGTAAG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCACTTACACTGTGCTCATaGACGGTCTGGGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: FNVQVSSRILFTAEPSASLTLCS*TVWEQC
Trigger: GCACTGTTCCCAGACCGTTCATGAGCACAGTGTAAG...TGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCAAACTTCCGCTTGGTaGAAGTCACCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVQTSAW*KSPVGS
Trigger: GGAACCGACAGGTGACTTTCACCAAGCGGAAGTTTG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACAAACTTCCGCTTGGTaGAAGTCACCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKQTSAW*KSPVGS
Trigger: GGAACCGACAGGTGACTTTCACCAAGCGGAAGTTTG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp TTTAATGTCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCACAAACTTCCGCTTGGTaGAAGTCACCTGTCGGTTCC +
Preference number: 4 (lower is better)
Translates to: FNVQVSSRILFTAEPSASQTSAW*KSPVGS
Trigger: GGAACCGACAGGTGACTTTCACCAAGCGGAAGTTTG...TGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGACATTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR TCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGGGCTGTCGCAGCCGTTaGAGCCCTTCTTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGGCRSR*SPSSSG
Trigger: CCCTGAGGAAGAAGGGCTTCAACGGCTGCGACAGCC...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR TCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGATTGCTGAACTGCAGTaGGCTCTGATTGGACACGGG +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWIAELQ*ALIGHG
Trigger: CCCGTGTCCAATCAGAGCTCACTGCAGTTCAGCAAT...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCGGGTCCGTGAGGGATaGTGTCACCAGGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGRVREG*CHQGRG
Trigger: ACCCCTTCCCTGGTGACATCATCCCTCACGGACCCG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGAGACTTGGCAGGGATaGCCTTGTTTAGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVETWQG*PCLGCC
Trigger: GCAACAGCCTAAACAAGGTCATCCCTGCCAAGTCTC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGTACAGAAAGAGGGGATaGGAGCATCCCCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVYRKRG*EHPPLQ
Trigger: TTGGAGAGGGGGATGCTCTCATCCCCTCTTTCTGTA...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCACCAGATGCCCTCATaGACACACTCAGGTACACGT +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEHQMPS*THSGTR
Trigger: ACGTGTACCTGAGTGTGTTCATGAGGGCATCTGGTG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCCCCAGGAGTGTGGGTaGTTGTCAGGTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGPQECG*LSGVGV
Trigger: CACCCCCACACCTGACAATCACCCACACTCCTGGGG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAACGGTCTGGGAACAGTaGTCAGTTCATGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKTVWEQ*SVHGLQ
Trigger: CTGCAGACCATGAACTGAGCACTGTTCCCAGACCGT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACCTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKPCLGC*HWPQGG
Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAATCTCCCCATTCTCCCTaGACACTGTGGCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKSPHSP*TLWPAL
Trigger: TAAAGCTGGCCACAGTGTGCAGGGAGAATGGGGAGA...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATTCTCCCCATTCTCCCTaGACACTGTGGCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHSPHSP*TLWPAL
Trigger: TAAAGCTGGCCACAGTGTGCAGGGAGAATGGGGAGA...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGTTTGATCTCCAATCCTaGCTGAGGTCTCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWFDLQS*LRSQDP
Trigger: GGGGTCCTGAGACCTCAGGCAGGATTGGAGATCAAA...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGAGCAGGCTGGGGGCCTaGCCCCTCTGGTTTGATCTC +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGSRLGA*PLWFDL
Trigger: GAGATCAAACCAGAGGGGGCAGGCCCCCAGCCTGCT...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGATTCTGGTTCCTTCCCTaGATCAAGTATGGGAATACT +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGFWFLP*IKYGNT
Trigger: AGTATTCCCATACTTGATGCAGGGAAGGAACCAGAA...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGAGGGACTTGAGTTTTaGTCTGAAAGCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPEGLEF*SESRSG
Trigger: CCCAGACCTGCTTTCAGAGCAAAACTCAAGTCCCTC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGAGGGGTCAGTCTTGCTaGACTGAGTGTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVRGQSC*TECAVE
Trigger: CTCAACAGCACACTCAGTGCAGCAAGACTGACCCCT...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGAGGGGTCAGTCTTGCTaGACTGAGTGTGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWRGQSC*TECAVE
Trigger: CTCAACAGCACACTCAGTGCAGCAAGACTGACCCCT...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGAGGGGCTCGCTGGGTaGTGGGTCTCGGCACACCTT +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTEGLAG*WVSAHL
Trigger: AAGGTGTGCCGAGACCCACCACCCAGCGAGCCCCTC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAAGGGGAGGGGCTCGCTaGGTGGTGGGTCTCGGCACA +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITRGGAR*VVGLGT
Trigger: TGTGCCGAGACCCACCACCCAGCGAGCCCCTCCCCT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCTGGGGGCTCCAAGCTaGGTGCTGTGGGTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTLGAPS*VLWVGG
Trigger: CCCACCTACCCACAGCACCCAGCTTGGAGCCCCCAG...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAATGCCACAGAAACCACTaGGGTGGTGAGCGAATGAGT +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKCHRNH*GGERMS
Trigger: ACTCATTCGCTCACCACCCCAGTGGTTTCTGTGGCA...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGTGCCACAGAAACCACTaGGGTGGTGAGCGAATGAGT +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIECHRNH*GGERMS
Trigger: ACTCATTCGCTCACCACCCCAGTGGTTTCTGTGGCA...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTCAGGGCGGGCAGCTaGGAACACAGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLRAGS*EHSWRG
Trigger: CCCCCTCCAGCTGTGTTCCCAGCTGCCCGCCCTGAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATGTGTGCAGGGGCATTTaGGGGCCAGGCTTAAGTATT +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHVCRGI*GPGLSI
Trigger: AATACTTAAGCCTGGCCCCCAAATGCCCCTGCACAC...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAAGCACCCACACACCTTaGGGGTGCAGCACACACAAG +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTSTHTP*GCSTHK
Trigger: CTTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCT...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGGCGTCAACTGAGGGGTaGGGAGCTATTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWASTEG*GAIALY
Trigger: ATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGC...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGGCAGACAGTCTGCCTaGCCACGTCACCCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTGRQSA*PRHPRP
Trigger: TGGCCTGGGGTGACGTGGCCAGGCAGACTGTCTGCC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACACACTGGGCGAGGCTCTaGGGACGCATGCATGAACAA +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTHWARL*GRMHEQ
Trigger: TTGTTCATGCATGCGTCCCCAGAGCCTCGCCCAGTG...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGTTCTTCAGAGGGAGTaGGTGGAGGCGAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVVLQRE*VEANLA
Trigger: AGCCAAATTCGCCTCCACCCACTCCCTCTGAAGAAC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGTGATTCGCTGGATCTaGATCTTTTTCCTCCCCATC +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPVIRWI*IFFLPI
Trigger: GATGGGGAGGAAAAAGATTCAGATCCAGCGAATCAC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAGGTTCCGCTCGTCGGTaGTTCGCTGGATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTGSARR*FAGSES
Trigger: AGATTCAGATCCAGCGAATCACCGACGAGCGGAACC...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGGGGAAGCCCGAGCACTaGCGTAGCCATTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGGKPEH*RSHSQQ
Trigger: CTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCC...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGATGGTGGGAATAGCCTaGGAAGGGAAGGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEMVGIA*EGKAIH
Trigger: ATGAATGGCCTTCCCTTCTCAGGCTATTCCCACCAT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGATCAAAAGCCAGGTTTaGCTTTATGAGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRIKSQV*LYEAEG
Trigger: GCCCTCTGCCTCATAAAGGCAAACCTGGCTTTTGAT...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAAGCCTCCAGCCCGGCTaGGGGAACGGTGTTGTCACG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITSLQPG*GNGVVT
Trigger: CGTGACAACACCGTTCCCCCAGCCGGGCTGGAGGCT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000368240.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGGGACTGTTGCTGAGGTaGCTGTTGCGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGGLLLR*LLRLLR
Trigger: CCTCAGCAGCCGCAACAGCCACCTCAGCAACAGTCC...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAGACTTGATGCTGATGTaGGGGTGGGTGGTGACTGTG +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTDLMLM*GWVVTV
Trigger: CACAGTCACCACCCACCCCCACATCAGCATCAAGTC...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAAGCTGGGAACACAGCTaGAGGGGGAGGCGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITSWEHS*RGRRRA
Trigger: AGCCCTGCGCCTCCCCCTCCAGCTGTGTTCCCAGCT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCCAGGGCTGTGGAGCTaGAGCAGCCAACTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGPGLWS*SSQLSL
Trigger: AAGGGAGAGTTGGCTGCTCCAGCTCCACAGCCCTGG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGGTGTGGGTGACTAAGTaGACATATGTGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWVWVTK*TYVGGS
Trigger: GCTTCCACCCACATATGTCCACTTAGTCACCCACAC...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGTGTGGGTGACTAAGTaGACATATGTGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVVWVTK*TYVGGS
Trigger: GCTTCCACCCACATATGTCCACTTAGTCACCCACAC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGCTTCTTTCAAGCCCTaGATCGAGGCTCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPASFKP*IEAHQF
Trigger: AAACTGATGAGCCTCGATCCAGGGCTTGAAAGAAGC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGGGTGGAGGCGAATTTaGCTTGAGAGGAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVGWRRI*LERKKT
Trigger: TGTCTTCTTCCTCTCAAGCCAAATTCGCCTCCACCC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACAGGATACCTTCGACTaGGGACCTGGGGGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITQDTFD*GPGGGL
Trigger: CAGCCCGCCCCCAGGTCCCCAGTCGAAGGTATCCTG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360595.7
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAAGGGGAGGCCCTGGCTaGGTAAACTCGGCGTTGCCA +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITRGGPG*VNSALP
Trigger: TGGCAACGCCGAGTTTACTCAGCCAGGGCCTCCCCT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAAGGTGGGACTGTTGCTaGGGTGGCTGTTGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITRWDCC*GGCCGC
Trigger: GCAGCCGCAACAGCCACCTCAGCAACAGTCCCACCT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACATACAGAAAGAGGGGATaGGAGCATCCCCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTYRKRG*EHPPLQ
Trigger: TTGGAGAGGGGGATGCTCTCATCCCCTCTTTCTGTA...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAAGGGCTGGCGTCAACTaGGGGGTGGGGAGCTATTGC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITRAGVN*GVGSYC
Trigger: GCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAACAGTACGGGCCGTTTaGGTCATTATTATTACAATA +
Preference number: 4 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGTVRAV*VIIITI
Trigger: TATTGTAATAATAATGACTCAAACGGCCCGTACTGT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGACAGTACGGGCCGTTTaGGTCATTATTATTACAATA +
Preference number: 4 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLTVRAV*VIIITI
Trigger: TATTGTAATAATAATGACTCAAACGGCCCGTACTGT...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368240.6
CDS-3UTR TCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAATGTGTCAAGTGTGGGTaGCTAAGTGGACATATGTGG +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKCVKCG*LSGHMW
Trigger: CCACATATGTCCACTTAGTCACCCACACTTGACACA...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGGGTTACTTTGGCAAATaGCCAGTTCTTCAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWGYFGK*PVLQRE
Trigger: CTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACC...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGATTCCTTCTACCAACTaGTTTAAGGGGTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVIPSTN*FKGWGE
Trigger: CTCTCCCCACCCCTTAAAGCAGTTGGTAGAAGGAAT...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGGGCTCGCTGGGTGGTaGGTCTCGGCACACCTTACA +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITGLAGW*VSAHLT
Trigger: TGTAAGGTGTGCCGAGACCCACCACCCAGCGAGCCC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACATGCCACAGAAACCACTaGGGTGGTGAGCGAATGAGT +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTCHRNH*GGERMS
Trigger: ACTCATTCGCTCACCACCCCAGTGGTTTCTGTGGCA...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGGAGAAGGGGAGGCCCTaGCTGAGTAAACTCGGCGTT +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGEKGRP*LSKLGV
Trigger: AACGCCGAGTTTACTCAGCCAGGGCCTCCCCTTCTC...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGGACTGTTGCTGAGGTaGCTGTTGCGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTGLLLR*LLRLLR
Trigger: CCTCAGCAGCCGCAACAGCCACCTCAGCAACAGTCC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAACCATCAAGCCCACTTTaGGGTTTCAGTCTAGAGTGT +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKPSSPL*GFSLEC
Trigger: ACACTCTAGACTGAAACCCCAAAGTGGGCTTGATGG...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGTCTCCCTGCACACTGTaGCCAGCTTTACAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGSPCTL*PALQGW
Trigger: CCAGCCCTGTAAAGCTGGCCACAGTGTGCAGGGAGA...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGGGGCCTGCCCCCTCTaGTTTGATCTCCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTGACPL*FDLQSC
Trigger: GCAGGATTGGAGATCAAACCAGAGGGGGCAGGCCCC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATAATACTGCAAGAGGCTaGGTCATAGAGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHNTARG*VIEVGK
Trigger: TTTGCCCACCTCTATGACCCAGCCTCTTGCAGTATT...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAATACTGCAAGAGGCTaGGTCATAGAGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKNTARG*VIEVGK
Trigger: TTTGCCCACCTCTATGACCCAGCCTCTTGCAGTATT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGTCCCTGCATCAAGTATaGGAATACTGCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIESLHQV*EYCKRL
Trigger: CAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGA...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGCTTCTTTCAAGCCCTaGATCGAGGCTCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEASFKP*IEAHQF
Trigger: AAACTGATGAGCCTCGATCCAGGGCTTGAAAGAAGC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTTCGACTGGGGACCTaGGGGCGGGCTGTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLRLGT*GRAVGL
Trigger: CAAACCAACAGCCCGCCCCCAGGTCCCCAGTCGAAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360595.7
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAATCTCCAATCCTGCCTaGGGTCTCAGGACCCCGTGC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITISNPA*GLRTPC
Trigger: GCACGGGGTCCTGAGACCTCAGGCAGGATTGGAGAT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCGAAACCTTCGGATACTaGACTGCAGAAATGTCACAT +
Preference number: 4 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPETFGY*TAEMSH
Trigger: ATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTC...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGAGGCGAATTTGGCTTaGGAGGAAGAAGACATTAAG +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVEANLA*EEEDIK
Trigger: CTTAATGTCTTCTTCCTCTCAAGCCAAATTCGCCTC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGCCTTTTCAGAACCTCTaGCTCACTTTCCCCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWPFQNL*LTFPLK
Trigger: TTTCAAGGGGAAAGTGAGGCAGAGGTTCTGAAAAGG...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGGTATTCTGCTCCATGTaGCTATGGCTACATGAACAC +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVVFCSM*LWLHEH
Trigger: GTGTTCATGTAGCCATAGGCACATGGAGCAGAATAC...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGCTCAATTTGCCCCCTaGCTAGCCCTTCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITAQFAP*LALLPS
Trigger: GGAGGGCAGAAGGGCTAGGCAGGGGGCAAATTGAGC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAGAGGGACTTGAGTTTTaGTCTGAAAGCAGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTEGLEF*SESRSG
Trigger: CCCAGACCTGCTTTCAGAGCAAAACTCAAGTCCCTC...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATAAAACTGGTGAATATTaGACCGTGAATTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHKTGEY*TVNCRG
Trigger: GCCCCTGCAATTCACGGTGCAATATTCACCAGTTTT...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAAAACTGGTGAATATTaGACCGTGAATTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLASTEGWGAIALYILEKKTGEY*TVNCRG
Trigger: GCCCCTGCAATTCACGGTGCAATATTCACCAGTTTT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
49% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGATCAGCAAGAGAAGGTaGATTACTTCCTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEISKRR*ITSFLS
Trigger: GGACAGGAAGGAAGTAATGCACCTTCTCTTGCTGAT...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACAGGCATGGCAAAGTTaGGGGCCGGGACAGTTGACC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITQAWQS*GPGQLT
Trigger: GGTCAACTGTCCCGGCCCCCAACTTTGCCATGCCTG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR CCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATGCACTAGCTGGCCGCTaGGGCAGGCCAGGAGACACA +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYALAGR*GRPGDT
Trigger: TGTGTCTCCTGGCCTGCCCCAGCGGCCAGCTAGTGC...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGTGCTCCATGTGCCTATaGCTACATGAACACAAAAAC +
Preference number: 4 (lower is better)
Translates to: VQCVRAEGEHRERSREDRCSMCL*LHEHKN
Trigger: GTTTTTGTGTTCATGTAGCCATAGGCACATGGAGCA...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGATGCAGCCTGGAGGTaGTGGGACAAGGAGGTAGCC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITDAAWR*WDKEVA
Trigger: GGCTACCTCCTTGTCCCACCACCTCCAGGCTGCATC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACATGGGGACACCGGTTCTaGCTTGATGCTGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITWGHRF*LDADVG
Trigger: CCCCACATCAGCATCAAGTCAGAACCGGTGTCCCCA...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGTGAATATTGCACCGTaGATTGCAGGGGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTVNIAP*IAGALT
Trigger: GGTGAGGGCCCCTGCAATTCACGGTGCAATATTCAC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGTCTCCCCATTCTCCCTaGACACTGTGGCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGSPHSP*TLWPAL
Trigger: TAAAGCTGGCCACAGTGTGCAGGGAGAATGGGGAGA...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTCCCCCAGGTAGTGTaGGTGCAAGACCAAGGACGT +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLPQVV*VQDQGR
Trigger: ACGTCCTTGGTCTTGCACGCACACTACCTGGGGGAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGGTTCTTCAGAGGGAGTaGGTGGAGGCGAATTTGGCT +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGVLQRE*VEANLA
Trigger: AGCCAAATTCGCCTCCACCCACTCCCTCTGAAGAAC...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGGTTCCGCTCGTCGGTaGTTCGCTGGATCTGAATCT +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITGSARR*FAGSES
Trigger: AGATTCAGATCCAGCGAATCACCGACGAGCGGAACC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATGGGAAGCCCGAGCACTaGCGTAGCCATTCCCAACAG +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYGKPEH*RSHSQQ
Trigger: CTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCC...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGATGGTGGGAATAGCCTaGGAAGGGAAGGCCATTCAT +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGMVGIA*EGKAIH
Trigger: ATGAATGGCCTTCCCTTCTCAGGCTATTCCCACCAT...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAAGAGGGCAAAACTGGTaGATATTGCACCGTGAATTG +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTRGQNW*ILHREL
Trigger: CAATTCACGGTGCAATATTCACCAGTTTTGCCCTCT...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATCTCAGATTCCCAGGCTaGCTTCCCGGCCCAAAGCTC +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYLRFPG*LPGPKL
Trigger: GAGCTTTGGGCCGGGAAGGCAGCCTGGGAATCTGAG...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACACACATAAACACCAGATaGCCTCATGAACACACTCAG +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTHINTR*PHEHTQ
Trigger: CTGAGTGTGTTCATGAGGGCATCTGGTGTTTATGTG...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGTCAGGGGTCAGTCTTaGTGCACTGAGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTVRGQS*CTECAV
Trigger: AACAGCACACTCAGTGCAGCAAGACTGACCCCTGAC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATAGCCTGCAGGAGAGGTaGGAAGGCTGGACGTGCTGT +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYSLQER*EGWTCC
Trigger: ACAGCACGTCCAGCCTTCCCACCTCTCCTGCAGGCT...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACACTCCAGTGGTTACTTTaGCAAATGCCCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTLQWLL*QMPSSS
Trigger: TGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAG...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTTACACTGTGCTCATaGACGGTCTGGGAACAGTGC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLTLCS*TVWEQC
Trigger: GCACTGTTCCCAGACCGTTCATGAGCACAGTGTAAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGAGACTTGGCAGGGATaGCCTTGTTTAGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITETWQG*PCLGCC
Trigger: GCAACAGCCTAAACAAGGTCATCCCTGCCAAGTCTC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR TCA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATACAGTACGGGCCGTTTaGGTCATTATTATTACAATA +
Preference number: 4 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHTVRAV*VIIITI
Trigger: TATTGTAATAATAATGACTCAAACGGCCCGTACTGT...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATCTGCCCCCTCTGGTTTaGTCTCCAATCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYLPPLV*SPILPE
Trigger: CTCAGGCAGGATTGGAGATCAAACCAGAGGGGGCAG...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGGGAGGGCCATTAGATaGCTCCAGTGGTTACTTTGG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITGRAIR*LQWLLW
Trigger: CCAAAGTAACCACTGGAGTCATCTAATGGCCCTCCC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACCTTGTTTAGGCTGTTaGCATTGGCCACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITPCLGC*HWPQGG
Trigger: TCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACACACACCTTGGGGGTaGAGCACACACAAGAATCAG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITHTPWG*STHKNQ
Trigger: CTGATTCTTGTGTGTGCTGCACCCCCAAGGTGTGTG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCTTCGGATACTGAACTaGAGAAATGTCACATATTCA +
Preference number: 4 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVLRILN*RNVTYS
Trigger: TGAATATGTGACATTTCTGCAGTTCAGTATCCGAAG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTGTGTTGTAGGCAGTaGGCATGGAAGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLCCRQ*AWKRRG
Trigger: TCCCCTTCTCTTCCATGCCCACTGCCTACAACACAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGCGTCAACTGAGGGGTaGGGAGCTATTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITASTEG*GAIALY
Trigger: ATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGGGTGGAGGCGAATTTaGCTTGAGAGGAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTGWRRI*LERKKT
Trigger: TGTCTTCTTCCTCTCAAGCCAAATTCGCCTCCACCC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATGTGAATATTGCACCGTaGATTGCAGGGGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYVNIAP*IAGALT
Trigger: GGTGAGGGCCCCTGCAATTCACGGTGCAATATTCAC...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGGGGGTGGGGAGCTATTaGACTGTATATCTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGGVGSY*TVYLRE
Trigger: TTCTCTAAGATATACAGTGCAATAGCTCCCCACCCC...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR GCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCAAGTATGGGAATACTaGAAGAGGCTGGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGQVWEY*KRLGHR
Trigger: TCTATGACCCAGCCTCTTGCAGTATTCCCATACTTG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATAGGCCCCTCTGCTTCTaGTTCCTTCCCTGCATCAAG +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYRPLCF*FLPCIK
Trigger: CTTGATGCAGGGAAGGAACCAGAAGCAGAGGGGCCT...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTAAGTGGACATATGTaGGTGGAAGCAGAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLSGHM*VEAEVP
Trigger: AGGGACCTCTGCTTCCACCCACATATGTCCACTTAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGAACAAGATTACACCCTaGCTTCTTTCAAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGNKITP*LLSSPG
Trigger: TCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTT...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACATGGTCCTCAGTCAAGTaGTGCATTAACCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITWSSVK*CINPFP
Trigger: AGGAAAGGGGTTAATGCATCACTTGACTGAGGACCA...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR TCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGGAAACCTTCGGATACTaGACTGCAGAAATGTCACAT +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGETFGY*TAEMSH
Trigger: ATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTC...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGTTCTGGTTCCTTCCCTaGATCAAGTATGGGAATACT +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGFWFLP*IKYGNT
Trigger: AGTATTCCCATACTTGATGCAGGGAAGGAACCAGAA...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATGTCAGGGGTCAGTCTTaGTGCACTGAGTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYVRGQS*CTECAV
Trigger: AACAGCACACTCAGTGCAGCAAGACTGACCCCTGAC...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATCTGTGTTGTAGGCAGTaGGCATGGAAGAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYLCCRQ*AWKRRG
Trigger: TCCCCTTCTCTTCCATGCCCACTGCCTACAACACAG...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGTGCTCCATGTGCCTATaGCTACATGAACACAAAAAC +
Preference number: 4 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGCSMCL*LHEHKN
Trigger: GTTTTTGTGTTCATGTAGCCATAGGCACATGGAGCA...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAAGAGGGCAAAACTGGTaGATATTGCACCGTGAATTG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITRGQNW*ILHREL
Trigger: CAATTCACGGTGCAATATTCACCAGTTTTGCCCTCT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACAAGTATGGGAATACTaGAAGAGGCTGGGTCATAGA +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITQVWEY*KRLGHR
Trigger: TCTATGACCCAGCCTCTTGCAGTATTCCCATACTTG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACACATAAACACCAGATaGCCTCATGAACACACTCAG +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITHINTR*PHEHTQ
Trigger: CTGAGTGTGTTCATGAGGGCATCTGGTGTTTATGTG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAATCAGCAAGAGAAGGTaGATTACTTCCTTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITISKRR*ITSFLS
Trigger: GGACAGGAAGGAAGTAATGCACCTTCTCTTGCTGAT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGAACTGTGTCAAGTGTaGGTGACTAAGTGGACATAT +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTELCQV*VTKWTY
Trigger: ATATGTCCACTTAGTCACCCACACTTGACACAGTTC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR TCA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACAACTGGTAATCAAGTaGTGCATTAACCCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: FLDCYTANVFQRSLFTITQLVIK*CINPFP
Trigger: AGGAAAGGGGTTAATGCATCACTTGATTACCAGTTG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368240.6
CDS-3UTR GCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATGGGGTGGGGAGCTATTaGACTGTATATCTTAGAGAA +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYGVGSY*TVYLRE
Trigger: TTCTCTAAGATATACAGTGCAATAGCTCCCCACCCC...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR GCA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCTTCGGATACTGAACTaGAGAAATGTCACATATTCA +
Preference number: 4 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTLRILN*RNVTYS
Trigger: TGAATATGTGACATTTCTGCAGTTCAGTATCCGAAG...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CCA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATCTCCAGTGGTTACTTTaGCAAATGCCCAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: RRISSVQYGPFESLLLQYLQWLL*QMPSSS
Trigger: TGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAG...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTCTGGCGCGTCGGTACTaGTCCTCCAGCAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGLARRY*SSSRGL
Trigger: GAGCCCCCTGCTGGAGGACAAGTACCGACGCGCCAG...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp GAGGAGGCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGCTGGCGCGTCGGTACTaGTCCTCCAGCAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: EEARGSPSTDVAIPNRAGLARRY*SSSRGL
Trigger: GAGCCCCCTGCTGGAGGACAAGTACCGACGCGCCAG...CCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGCCTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGACTCGCAGGTCGGGCTaGCGGCTGGGGGCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLTRRSG*RLGAPS
Trigger: GCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGT...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp GCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGGCAGGCGGCTGCGCTCACGGCTaGGGGACACCGGTTCTGACT +
Preference number: 5 (lower is better)
Translates to: ARGSPSTDVAIPNRAGAGGCAHG*GTPVLT
Trigger: AGTCAGAACCGGTGTCCCCAAGCCGTGAGCGCAGCC...GCCTGCCCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS CCA 90 bp GGACAGTTGACCCATAGCGCCGGAAGAGCCCGTCGAGCTCCTCGCTaGCGCGTCGGTACTTGTCCTCCAGCAGGGGGCTCTGTTCCAGCG +
Preference number: 5 (lower is better)
Translates to: GQLTHSAGRARRAPR*RVGTCPPAGGSVPA
Trigger: CGCTGGAACAGAGCCCCCTGCTGGAGGACAAGTACCGACGCGCCAGCGAGGAGCTCGACGGGCTCTTCCGGCGCTATGGGTCAACTGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGCTGGCGCGTCGGTACTaGTCCTCCAGCAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLLARRY*SSSRGL
Trigger: GAGCCCCCTGCTGGAGGACAAGTACCGACGCGCCAG...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR CAA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTGGGCTGCTGTGGCTGTaGCCAGGCAGTGACATTGCC +
Preference number: 5 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGGLLWL*PGSDIA
Trigger: GGCAATGTCACTGCCTGGCAACAGCCACAGCAGCCC...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGTGGGGGCCGGGACAGTaGACCCATAGCGCCGGAAGA +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLWGPGQ*THSAGR
Trigger: TCTTCCGGCGCTATGGGTCAACTGTCCCGGCCCCCA...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR CAA 90 bp GAGGAGGCCAGGGGAAGCCCGAGCACTGACGTAGCCATTCCCAACAGGGCTGGGGGGCTGCTGTGGCTGTaGCCAGGCAGTGACATTGCC +
Preference number: 5 (lower is better)
Translates to: EEARGSPSTDVAIPNRAGGLLWL*PGSDIA
Trigger: GGCAATGTCACTGCCTGGCAACAGCCACAGCAGCCC...CCCAGCCCTGTTGGGAATGGCTACGTCAGTGCTCGGGCTTCCCCTGGCCTCCTC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAACTGGAGGGAGAGACCTaGGCAGAGGTAGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKLEGET*AEVGLQ
Trigger: CTGCAGCCCTACCTCTGCCAAGGTCTCTCCCTCCAG...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp CTGTGGCTGCTGCGGCTGCTGGGGCTGCTGTGGCTGTTGCCAGGCAGTGACATTGCTGGGGGAACGGTGTaGTCACGGCAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: LWLLRLLGLLWLLPGSDIAGGTV*SRQRAG
Trigger: ACCCGCTCTTTGCCGTGACAACACCGTTCCCCCAGC...AATGTCACTGCCTGGCAACAGCCACAGCAGCCCCAGCAGCCGCAGCAGCCACAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGGGGCTGTCGCAGCCGTaGAAGCCCTTCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLGLSQP*KPFFLR
Trigger: CCTGAGGAAGAAGGGCTTCAACGGCTGCGACAGCCC...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR CAA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGACTCGCAGGTCGGGCTaGCGGCTGGGGGCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SRYQAASSSQLSPQPQALTRRSG*RLGAPS
Trigger: GCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGT...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGACTCGCAGGTCGGGCTaGCGGCTGGGGGCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: TLWPALQGWRQLRGGELLTRRSG*RLGAPS
Trigger: GCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGT...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS TCA 90 bp GGGGTGACCAGGGAGCCGCTGGGATTGCTGAACTGCAGTGAGCTCTaGTTGGACACGGGCACCGTGACAGGCATGGCAAAGTTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: GVTREPLGLLNCSEL*LDTGTVTGMAKLGA
Trigger: GGCCCCCAACTTTGCCATGCCTGTCACGGTGCCCGTGTCCAATCAGAGCTCACTGCAGTTCAGCAATCCCAGCGGCTCCCTGGTCACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGAGGGAGCCGCTGGGATaGCTGAACTGCAGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLREPLG*LNCSEL
Trigger: GAGCTCACTGCAGTTCAGCAATCCCAGCGGCTCCCT...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTACCTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGTLFRL*PLATGR
Trigger: CCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGT...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAAGGCCAAACTTCCGCTaGGTGAAAGTCACCTGTCGG +
Preference number: 5 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKRPNFR*VKVTCR
Trigger: CCGACAGGTGACTTTCACCAAGCGGAAGTTTGGCCT...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGTTTAGGCTGTTGCCATaGGCCACAGGGAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLFRLLP*ATGRRP
Trigger: TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAA...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCTTTAGGCTGTTGCCATaGGCCACAGGGAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGFRLLP*ATGRRP
Trigger: TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAA...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp GGGGTGGGGTGGGAGGGCTCCACATGCAGGGCTCGGCACCTGTCCTTTCCCAAAACCTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GVGWEGSTCRARHLSFPKTLFRL*PLATGR
Trigger: CCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGT...TTTGGGAAAGGACAGGTGCCGAGCCCTGCATGTGGAGCCCTCCCACCCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGGGCTGCGCTCACGGCTaGGGGACACCGGTTCTGACT +
Preference number: 5 (lower is better)
Translates to: TLWPALQGWRQLRGGELLGCAHG*GTPVLT
Trigger: AGTCAGAACCGGTGTCCCCAAGCCGTGAGCGCAGCC...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGGCTGGGGGAACGGTGTaGTCACGGCAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: SRYQAASSSQLSPQPQALAGGTV*SRQRAG
Trigger: ACCCGCTCTTTGCCGTGACAACACCGTTCCCCCAGC...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCAGGCCAAACTTCCGCTaGGTGAAAGTCACCTGTCGG +
Preference number: 5 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGRPNFR*VKVTCR
Trigger: CCGACAGGTGACTTTCACCAAGCGGAAGTTTGGCCT...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGGGGCTGTCGCAGCCGTaGAAGCCCTTCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLGLSQP*KPFFLR
Trigger: CCTGAGGAAGAAGGGCTTCAACGGCTGCGACAGCCC...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGTGTGTGCAGGGGCATTaGGGGGCCAGGCTTAAGTAT +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLCVQGH*GARLKY
Trigger: ATACTTAAGCCTGGCCCCCAAATGCCCCTGCACACA...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGGGGGCGCCGCACCCCTaGGGCAGAGGAGCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEGAPHP*GRGAGL
Trigger: AAGCCCAGCTCCTCTGCCCAAGGGGTGCGGCGCCCC...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGCATTCCCTGTGCTTCTaGTGCAGCGCCTCGATGATG +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLHSLCF*CSASMM
Trigger: CATCATCGAGGCGCTGCACAAGAAGCACAGGGAATG...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464356.6
CDS TCA 90 bp CAGGGAAGGGGTGACCAGGGAGCCGCTGGGATTGCTGAACTGCAGTaGGCTCTGATTGGACACGGGCACCGTGACAGGCATGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: QGRGDQGAAGIAELQ*ALIGHGHRDRHGKV
Trigger: AACTTTGCCATGCCTGTCACGGTGCCCGTGTCCAATCAGAGCTCACTGCAGTTCAGCAATCCCAGCGGCTCCCTGGTCACCCCTTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
ENST00000493077.1
CDS GCA 90 bp CACTGTGCTCATGAACGGTCTGGGAACAGTGCTCAGTTCATGGTCTaGAGGATACCTTCTGCACAGCCTCCAGCCCGGCTGGGGGAACGG +
Preference number: 5 (lower is better)
Translates to: HCAHERSGNSAQFMV*RIPSAQPPARLGER
Trigger: CCGTTCCCCCAGCCGGGCTGGAGGCTGTGCAGAAGGTATCCTGCAGACCATGAACTGAGCACTGTTCCCAGACCGTTCATGAGCACAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp GATGACTCGCAGGTCGGGCTTGCGGCTGGGGGCTCCAAGCTGGGTGCTGTGGGTAGCTTGTTGGAGTGGTaGAAGATGATGAGTGCGATC +
Preference number: 5 (lower is better)
Translates to: DDSQVGLAAGGSKLGAVGSLLEW*KMMSAI
Trigger: GATCGCACTCATCATCTTCAACCACTCCAACAAGCT...ACCCACAGCACCCAGCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp TTGGCAGGGATGACCTTGTTTAGGCTGTTGCCATTGGCCACAGGGAGGAGGCCAGGGCTGTCGCAGCCGTaGAAGCCCTTCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LAGMTLFRLLPLATGRRPGLSQP*KPFFLR
Trigger: CCTGAGGAAGAAGGGCTTCAACGGCTGCGACAGCCC...TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCTGCCCGGGATGAGGTaGCTGAGAGATACAGGGACC +
Preference number: 5 (lower is better)
Translates to: TLWPALQGWRQLRGGELLLPGMR*LRDTGT
Trigger: GGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGCTGCCCGGGATGAGGTaGCTGAGAGATACAGGGACC +
Preference number: 5 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLLPGMR*LRDTGT
Trigger: GGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAG...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCAGCACCCACACACCTaGGGGGTGCAGCACACACAA +
Preference number: 5 (lower is better)
Translates to: TLWPALQGWRQLRGGELLQHPHT*GVQHTQ
Trigger: TTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCTG...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS TCA 90 bp GGGCTCGCTGGGTGGTGGGTCTCGGCACACCTTACACTGTGCTCATaGACGGTCTGGGAACAGTGCTCAGTTCATGGTCTGCAGGATACC +
Preference number: 5 (lower is better)
Translates to: GLAGWWVSAHLTLCS*TVWEQCSVHGLQDT
Trigger: GGTATCCTGCAGACCATGAACTGAGCACTGTTCCCAGACCGTTCATGAGCACAGTGTAAGGTGTGCCGAGACCCACCACCCAGCGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
ENST00000475587.2
ENST00000489057.1
CDS-3UTR CAA 90 bp TCCAGGTATCAAGCCGCATCCTCTTCACAGCTGAGCCCTCAGCCTCAGGCTCTGTTTAGGCTGTTGCCATaGGCCACAGGGAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SRYQAASSSQLSPQPQALFRLLP*ATGRRP
Trigger: TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAA...CAGAGCCTGAGGCTGAGGGCTCAGCTGTGAAGAGGATGCGGCTTGATACCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp CCGGGGCAGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTGTTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTG +
Preference number: 5 (lower is better)
Translates to: PGQGRAGGEIVNSSSGRLLAGMT*FRLLPL
Trigger: CAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA...CAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCTGCCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAGGGGCGCCGCACCCCTaGGGCAGAGGAGCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTGAPHP*GRGAGL
Trigger: AAGCCCAGCTCCTCTGCCCAAGGGGTGCGGCGCCCC...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAAAAGCAGGTCTGGGGTaGGGGGAAGAGGGTACTCCA +
Preference number: 5 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGKAGLG*GEEGTP
Trigger: TGGAGTACCCTCTTCCCCCAACCCCAGACCTGCTTT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGATATTGCACCGTGAATaGCAGGGGCCCTCACCCCCA +
Preference number: 5 (lower is better)
Translates to: TLWPALQGWRQLRGGELLILHRE*QGPSPP
Trigger: TGGGGGTGAGGGCCCCTGCAATTCACGGTGCAATAT...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp GAGGGGCCAAGGAGGAATGAGGGAGGTGGGACCTCTACGGACCCATCCGTAGGCAGCTTGTTGGAGTGGTaGAAGATGATGAGTGCGATC +
Preference number: 5 (lower is better)
Translates to: EGPRRNEGGGTSTDPSVGSLLEW*KMMSAI
Trigger: GATCGCACTCATCATCTTCAACCACTCCAACAAGCT...GCCTACGGATGGGTCCGTAGAGGTCCCACCTCCCTCATTCCTCCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp CAGGGGGCTGCCCGGGATGAGGTTGCTGAGAGATACAGGGACCAGGTGGGACTGAGCTTGTTGGAGTGGTaGAAGATGATGAGTGCGATC +
Preference number: 5 (lower is better)
Translates to: QGAARDEVAERYRDQVGLSLLEW*KMMSAI
Trigger: GATCGCACTCATCATCTTCAACCACTCCAACAAGCT...CAGTCCCACCTGGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAGCCCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGAACCTTGTTTAGGCTGTaGCCATTGGCCACAGGGAGG +
Preference number: 5 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGTLFRL*PLATGR
Trigger: CCTCCCTGTGGCCAATGGCAACAGCCTAAACAAGGT...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CAA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGTCCAGTCACACAGATTaGCACACACACCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: TLWPALQGWRQLRGGELLSSHTD*HTHPAR
Trigger: CCTGGCTGGGTGTGTGTGCAAATCTGTGTGACTGGA...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAGCTGGGGGAACGGTGTaGTCACGGCAAAGAGCGGGT +
Preference number: 5 (lower is better)
Translates to: GLASTEGWGAIALYILEKAGGTV*SRQRAG
Trigger: ACCCGCTCTTTGCCGTGACAACACCGTTCCCCCAGC...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR CAA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGACAGGCATGGCAAAGTaGGGGGCCGGGACAGTTGAC +
Preference number: 5 (lower is better)
Translates to: VQCVRAEGEHRERSREDRTGMAK*GAGTVD
Trigger: GTCAACTGTCCCGGCCCCCAACTTTGCCATGCCTGT...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR CAA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAGGGCTGCTGTGGCTGTaGCCAGGCAGTGACATTGCC +
Preference number: 5 (lower is better)
Translates to: GLASTEGWGAIALYILEKGLLWL*PGSDIA
Trigger: GGCAATGTCACTGCCTGGCAACAGCCACAGCAGCCC...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGCAGCACCCACACACCTaGGGGGTGCAGCACACACAA +
Preference number: 5 (lower is better)
Translates to: VQCVRAEGEHRERSREDRQHPHT*GVQHTQ
Trigger: TTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCTG...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAGGGAGCCGCTGGGATaGCTGAACTGCAGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GLASTEGWGAIALYILEKREPLG*LNCSEL
Trigger: GAGCTCACTGCAGTTCAGCAATCCCAGCGGCTCCCT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp AAGGAGGTAGCCAGAGACAATAGGGGCGCCAAGAGCAAGGAGGTGGGGTCAGGATTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTG +
Preference number: 5 (lower is better)
Translates to: KEVARDNRGAKSKEVGSGLAGMT*FRLLPL
Trigger: CAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA...TCCTGACCCCACCTCCTTGCTCTTGGCGCCCCTATTGTCTCTGGCTACCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CAA 90 bp ATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGGTCGGGCTTGCGGCTGTTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTG +
Preference number: 5 (lower is better)
Translates to: INPFPAWEVMTRRSGLRLLAGMT*FRLLPL
Trigger: CAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA...CAGCCGCAAGCCCGACCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS-3UTR CAA 90 bp CTCTGCTTCTGGTTCCTTCCCTGCATCAAGTATGGGAATACTGCAAGAGGCTGGCTGCCCGGGATGAGGTaGCTGAGAGATACAGGGACC +
Preference number: 5 (lower is better)
Translates to: LCFWFLPCIKYGNTARGWLPGMR*LRDTGT
Trigger: GGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAG...CCAGCCTCTTGCAGTATTCCCATACTTGATGCAGGGAAGGAACCAGAAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGCTGCCCGGGATGAGGTaGCTGAGAGATACAGGGACC +
Preference number: 5 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVLPGMR*LRDTGT
Trigger: GGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAG...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp TCAGACACAGAGATGCCCCTAGAGCTCCAGTCACACAGATTTGCACACACACCCATATTGCACCGTGAATaGCAGGGGCCCTCACCCCCA +
Preference number: 5 (lower is better)
Translates to: SDTEMPLELQSHRFAHTPILHRE*QGPSPP
Trigger: TGGGGGTGAGGGCCCCTGCAATTCACGGTGCAATAT...GGGTGTGTGTGCAAATCTGTGTGACTGGAGCTCTAGGGGCATCTCTGTGTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp GAGAGGAAGAAGACATTAAGTCCTCATCTGAGGTCTGGGTTCCCAGGGACCCATACAGGCATGGCAAAGTaGGGGGCCGGGACAGTTGAG +
Preference number: 5 (lower is better)
Translates to: ERKKTLSPHLRSGFPGTHTGMAK*GAGTVE
Trigger: CTCAACTGTCCCGGCCCCCAACTTTGCCATGCCTGT...ATGGGTCCCTGGGAACCCAGACCTCAGATGAGGACTTAATGTCTTCTTCCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464356.6
CDS TCA 90 bp AGGGAAGGGCGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTaGGAGGAGGGGAGTGGGAATCGTCACTTTAATGTCCAGGTATCA +
Preference number: 5 (lower is better)
Translates to: REGRAVRLSTLHQGG*EEGSGNRHFNVQVS
Trigger: TGATACCTGGACATTAAAGTGACGATTCCCACTCCCCTCCTCTCAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCGCCCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCTGGCGCGTCGGTACTaGTCCTCCAGCAGGGGGCTC +
Preference number: 5 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGLARRY*SSSRGL
Trigger: GAGCCCCCTGCTGGAGGACAAGTACCGACGCGCCAG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR CAA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCACTCGCAGGTCGGGCTaGCGGCTGGGGGCTCCAAGC +
Preference number: 5 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTTRRSG*RLGAPS
Trigger: GCTTGGAGCCCCCAGCCGCAAGCCCGACCTGCGAGT...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACAGGGCTGCTGTGGCTGTaGCCAGGCAGTGACATTGCC +
Preference number: 5 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTGLLWL*PGSDIA
Trigger: GGCAATGTCACTGCCTGGCAACAGCCACAGCAGCCC...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGTGGGGGCCGGGACAGTaGACCCATAGCGCCGGAAGA +
Preference number: 5 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGWGPGQ*THSAGR
Trigger: TCTTCCGGCGCTATGGGTCAACTGTCCCGGCCCCCA...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR CAA 90 bp GTTCAATGTGTCAGAGCTGAGGGTGAACACAGGGAAAGGAGCAGGGAAGACAGGCCCATCAAGCCCACTTaGGGGTTTCAGTCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: VQCVRAEGEHRERSREDRPIKPT*GFQSRV
Trigger: CACTCTAGACTGAAACCCCAAAGTGGGCTTGATGGG...CCTGTCTTCCCTGCTCCTTTCCCTGTGTTCACCCTCAGCTCTGACACATTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAATGTGTGCAGGGGCATTaGGGGGCCAGGCTTAAGTAT +
Preference number: 5 (lower is better)
Translates to: GLASTEGWGAIALYILEKCVQGH*GARLKY
Trigger: ATACTTAAGCCTGGCCCCCAAATGCCCCTGCACACA...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS TCA 90 bp CCAAGGCGCTGGGCATTGTTCAGATCTAAATGGTCCTCAGTCAAGTaGTGCATTAACCCCTTTCCTGCCTGGGAAGTGATGACTCGCAGG +
Preference number: 5 (lower is better)
Translates to: PRRWALFRSKWSSVK*CINPFPAWEVMTRR
Trigger: CCTGCGAGTCATCACTTCCCAGGCAGGAAAGGGGTTAATGCATCACTTGACTGAGGACCATTTAGATCTGAACAATGCCCAGCGCCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR CAA 90 bp GGACGCATGCATGAACAAGATTACACCCTGGCTTCTTTCAAGCCCTGGATCGAGCACCCAGTCAGCGGATaGGGGTTAAGAGTGAGTAAG +
Preference number: 5 (lower is better)
Translates to: GRMHEQDYTLASFKPWIEHPVSG*GLRVSK
Trigger: CTTACTCACTCTTAACCCCAATCCGCTGACTGGGTG...CTCGATCCAGGGCTTGAAAGAAGCCAGGGTGTAATCTTGTTCATGCATGCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGGGCTGTCGCAGCCGTaGAAGCCCTTCTTCCTCAGG +
Preference number: 5 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTGLSQP*KPFFLR
Trigger: CCTGAGGAAGAAGGGCTTCAACGGCTGCGACAGCCC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000348159.9
CDS-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAGGCTGCGCTCACGGCTaGGGGACACCGGTTCTGACT +
Preference number: 5 (lower is better)
Translates to: FLDCYTANVFQRSLFTITGCAHG*GTPVLT
Trigger: AGTCAGAACCGGTGTCCCCAAGCCGTGAGCGCAGCC...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CAA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCAGCACCCACACACCTaGGGGGTGCAGCACACACAA +
Preference number: 5 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGQHPHT*GVQHTQ
Trigger: TTGTGTGTGCTGCACCCCCAAGGTGTGTGGGTGCTG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAAGCTTGTTGGAGTGGTaGAAGATGATGAGTGCGATC +
Preference number: 5 (lower is better)
Translates to: GLASTEGWGAIALYILEKSLLEW*KMMSAI
Trigger: GATCGCACTCATCATCTTCAACCACTCCAACAAGCT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCAGGGAGCCGCTGGGATaGCTGAACTGCAGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTREPLG*LNCSEL
Trigger: GAGCTCACTGCAGTTCAGCAATCCCAGCGGCTCCCT...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGTTTAGGCTGTTGCCATaGGCCACAGGGAGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGFRLLP*ATGRRP
Trigger: TGGCCTCCTCCCTGTGGCCAATGGCAACAGCCTAAA...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCAGACCATCCCAGTGTaGACTCCCCCAGGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGQTIPV*TPPGSV
Trigger: CACACTACCTGGGGGAGTCAACACTGGGATGGTCTG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp ACACTGTGGCCAGCTTTACAGGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGTACAGTACGGGCCGTTaGAGTCATTATTATTACAAT +
Preference number: 5 (lower is better)
Translates to: TLWPALQGWRQLRGGELLYSTGR*SHYYYN
Trigger: ATTGTAATAATAATGACTCAAACGGCCCGTACTGTA...CAATAGCTCCCCACCCCTCAGTTGACGCCAGCCCTGTAAAGCTGGCCACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp GATGACTCCAGTGGTTACTTTGGCAAATGCCCAGTTCTTCAGAGGGAGTGGGTGACTCCAGTGGTTACTTaGGCAAATGCCCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: DDSSGYFGKCPVLQREWVTPVVT*ANAQFF
Trigger: GAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGT...CACCCACTCCCTCTGAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp GGGCTGGCGTCAACTGAGGGGTGGGGAGCTATTGCACTGTATATCTTAGAGAAAACTCCAGTGGTTACTTaGGCAAATGCCCAGTTCTTC +
Preference number: 5 (lower is better)
Translates to: GLASTEGWGAIALYILEKTPVVT*ANAQFF
Trigger: GAAGAACTGGGCATTTGCCAAAGTAACCACTGGAGT...TTTCTCTAAGATATACAGTGCAATAGCTCCCCACCCCTCAGTTGACGCCAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAACAGGCATGGCAAAGTaGGGGGCCGGGACAGTTGAC +
Preference number: 5 (lower is better)
Translates to: FLDCYTANVFQRSLFTITTGMAK*GAGTVD
Trigger: GTCAACTGTCCCGGCCCCCAACTTTGCCATGCCTGT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACTGCCCGGGATGAGGTaGCTGAGAGATACAGGGACC +
Preference number: 5 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLPGMR*LRDTGT
Trigger: GGTCCCTGTATCTCTCAGCAACCTCATCCCGGGCAG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CAA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCAAAGCAGGTCTGGGGTaGGGGGAAGAGGGTACTCCA +
Preference number: 5 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTKAGLG*GEEGTP
Trigger: TGGAGTACCCTCTTCCCCCAACCCCAGACCTGCTTT...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCTGTGTGCAGGGGCATTaGGGGGCCAGGCTTAAGTAT +
Preference number: 5 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTCVQGH*GARLKY
Trigger: ATACTTAAGCCTGGCCCCCAAATGCCCCTGCACACA...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACAGACCATCCCAGTGTaGACTCCCCCAGGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: FLDCYTANVFQRSLFTITQTIPV*TPPGSV
Trigger: CACACTACCTGGGGGAGTCAACACTGGGATGGTCTG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATCTGGAGGGAGAGACCTaGGCAGAGGTAGGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RRISSVQYGPFESLLLQYLEGET*AEVGLQ
Trigger: CTGCAGCCCTACCTCTGCCAAGGTCTCTCCCTCCAG...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGCACCCAGTCAGCGGATaGGGGTTAAGAGTGAGTAAG +
Preference number: 5 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGHPVSG*GLRVSK
Trigger: CTTACTCACTCTTAACCCCAATCCGCTGACTGGGTG...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp TTATACACAAATGTAACCGTCAACAGGACACGAAGCACAAGAAAGGAAGTGGGGTTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTG +
Preference number: 5 (lower is better)
Translates to: LYTNVTVNRTRSTRKEVGLAGMT*FRLLPL
Trigger: CAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA...CCCCACTTCCTTTCTTGTGCTTCGTGTCCTGTTGACGGTTACATTTGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACACCCATCAAGCCCACTTaGGGGTTTCAGTCTAGAGTG +
Preference number: 5 (lower is better)
Translates to: FLDCYTANVFQRSLFTITPIKPT*GFQSRV
Trigger: CACTCTAGACTGAAACCCCAAAGTGGGCTTGATGGG...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS-3UTR CAA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATTGGGGGCCGGGACAGTaGAGGCCAGTCTATAACTCT +
Preference number: 5 (lower is better)
Translates to: RRISSVQYGPFESLLLQYWGPGQ*RPVYNS
Trigger: AGAGTTATAGACTGGCCTCAACTGTCCCGGCCCCCA...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000464356.6
CDS-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACATTGGCAGGGATGACCTaGTTTAGGCTGTTGCCATTG +
Preference number: 5 (lower is better)
Translates to: FLDCYTANVFQRSLFTITLAGMT*FRLLPL
Trigger: CAATGGCAACAGCCTAAACAAGGTCATCCCTGCCAA...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CAA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATTCCAGTCACACAGATTaGCACACACACCCAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RRISSVQYGPFESLLLQYSSHTD*HTHPAR
Trigger: CCTGGCTGGGTGTGTGTGCAAATCTGTGTGACTGGA...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp AAGAGAAACCTTCGGATACTGAACTGCAGAAATGTCACATATTCACAGACCACCGAGGCTCATCAGTTTTaGAAACTCCGTCTAGAAGCC +
Preference number: 5 (lower is better)
Translates to: KRNLRILNCRNVTYSQTTEAHQF*KLRLEA
Trigger: GGCTTCTAGACGGAGTTTCAAAAACTGATGAGCCTC...GGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTATCCGAAGGTTTCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp TTCCTGGACTGTTACACCGCTAACGTTTTCCAAAGGTCGCTATTTACAATTACAAGCTTGTTGGAGTGGTaGAAGATGATGAGTGCGATC +
Preference number: 5 (lower is better)
Translates to: FLDCYTANVFQRSLFTITSLLEW*KMMSAI
Trigger: GATCGCACTCATCATCTTCAACCACTCCAACAAGCT...TGTAATTGTAAATAGCGACCTTTGGAAAACGTTAGCGGTGTAACAGTCCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
CDS-3UTR CAA 90 bp ATACTGAACTGCAGAAATGTCACATATTCACAGACCACCCCATCCCCAGGGACATACAGTACGGGCCGTTaGAGTCATTATTATTACAAT +
Preference number: 5 (lower is better)
Translates to: ILNCRNVTYSQTTPSPGTYSTGR*SHYYYN
Trigger: ATTGTAATAATAATGACTCAAACGGCCCGTACTGTA...TGTCCCTGGGGATGGGGTGGTCTGTGAATATGTGACATTTCTGCAGTTCAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS-3UTR CAA 90 bp AGAAGAATCTCGTCTGTACAGTACGGGCCGTTTGAGTCATTATTATTACAATATGAGGCTCATCAGTTTTaGAAACTCCGTCTAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RRISSVQYGPFESLLLQYEAHQF*KLRLEA
Trigger: GGCTTCTAGACGGAGTTTCAAAAACTGATGAGCCTC...ATATTGTAATAATAATGACTCAAACGGCCCGTACTGTACAGACGAGATTCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000464356.6
CDS TCA 72 bp CGGGAAGCCGCAGCTCCGGGCGGGGAGAATAATAAATaGGGCCGGCGTCCGCGCGGGCCCTGGGCGGCGCCG +
Preference number: 6 (lower is better)
Translates to: REAAAPGGENNK*GRRPRGPWAAP
Trigger: CGGCGCCGCCCAGGGCCCGCGCGGACGCCGGCCTCATTTATTATTCTCCCCGCCCGGAGCTGCGGCTTCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000368240.6
ENST00000475587.2
ENST00000489057.1
CDS CCA 72 bp CCCCATAGCGCCGGAAGAGCCCGTCGAGCTCCTCGCTaGCGCGTCGGTACTTGTCCTCCAGCAGGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: PHSAGRARRAPR*RVGTCPPAGGS
Trigger: AGAGCCCCCTGCTGGAGGACAAGTACCGACGCGCCAGCGAGGAGCTCGACGGGCTCTTCCGGCGCTATGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368240.6
ENST00000475587.2
CDS CCA 72 bp ACCCATAGCGCCGGAAGAGCCCGTCGAGCTCCTCGCTaGCGCGTCGGTACTTGTCCTCCAGCAGGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: THSAGRARRAPR*RVGTCPPAGGS
Trigger: AGAGCCCCCTGCTGGAGGACAAGTACCGACGCGCCAGCGAGGAGCTCGACGGGCTCTTCCGGCGCTATGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000360595.7
CDS CAA 72 bp CCTAAGACCCGAACCAGCCCGGCTGGGGGAACGGTGTaGTCACGGCAAAGAGCGGGTAGCCCTCGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: PKTRTSPAGGTV*SRQRAGSPRPW
Trigger: CCAGGGGCGAGGGCTACCCGCTCTTTGCCGTGACAACACCGTTCCCCCAGCCGGGCTGGTTCGGGTCTTAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489057.1
CDS CCA 72 bp GTGTTGTCACGGCAAAGAGCGGGTAGCCCTCGCCCCTaGTCCGGGGGATCTTCAACACCGGGAAGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: VLSRQRAGSPRP*SGGSSTPGSRS
Trigger: GCTGCGGCTTCCCGGTGTTGAAGATCCCCCGGACCAGGGGCGAGGGCTACCCGCTCTTTGCCGTGACAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000368240.6
ENST00000475587.2
ENST00000489057.1
CDS CAA 72 bp AAGAGCCCGTCGAGCTCCTCGCTGGCGCGTCGGTACTaGTCCTCCAGCAGGGGGCTCTGTTCCAGCGAGTCC +
Preference number: 6 (lower is better)
Translates to: KSPSSSSLARRY*SSSRGLCSSES
Trigger: GGACTCGCTGGAACAGAGCCCCCTGCTGGAGGACAAGTACCGACGCGCCAGCGAGGAGCTCGACGGGCTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000475587.2
CDS CAA 90 bp TGTTCCAGCGAGTCCTCCCCGTCGGGCTCGGGGCTGTCGCAGCCGTaGAAGCCCTTCTTCCTCAGGGTCTCGATGATGTCGGCGTTGGTG +
Preference number: 6 (lower is better)
Translates to: CSSESSPSGSGLSQP*KPFFLRVSMMSALV
Trigger: CACCAACGCCGACATCATCGAGACCCTGAGGAAGAAGGGCTTCAACGGCTGCGACAGCCCCGAGCCCGACGGGGAGGACTCGCTGGAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000475587.2
CDS CAA 72 bp GGGAACCGGGGCCGAGCGCCTGAGCCGCCTCGGCTGTaGTTGATATTTTGCTTCCTTCCTCCTTTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: GNRGRAPEPPRL*LIFCFLPPFGL
Trigger: GAGCCCGAAAGGAGGAAGGAAGCAAAATATCAACAACAGCCGAGGCGGCTCAGGCGCTCGGCCCCGGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348159.9
ENST00000489057.1
CDS TCA 72 bp GGTGACCAGGGAGCCGCTGGGATTGCTGAACTGCAGTaGGCTCTGATTGGACACGGGCACCGTGACAGGCAT +
Preference number: 6 (lower is better)
Translates to: GDQGAAGIAELQ*ALIGHGHRDRH
Trigger: ATGCCTGTCACGGTGCCCGTGTCCAATCAGAGCTCACTGCAGTTCAGCAATCCCAGCGGCTCCCTGGTCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
ENST00000493077.1
CDS TCA 72 bp AGGGAGCCGCTGGGATTGCTGAACTGCAGTGAGCTCTaGTTGGACACGGGCACCGTGACAGGCATGGCAAAG +
Preference number: 6 (lower is better)
Translates to: REPLGLLNCSEL*LDTGTVTGMAK
Trigger: CTTTGCCATGCCTGTCACGGTGCCCGTGTCCAATCAGAGCTCACTGCAGTTCAGCAATCCCAGCGGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
ENST00000493077.1
CDS GCA 72 bp AACACCTCGTCCACCTCAGGGCTCTCACATTCCCTGTaGTTCTTGTGCAGCGCCTCGATGATGTCGGCGTTG +
Preference number: 6 (lower is better)
Translates to: NTSSTSGLSHSL*FLCSASMMSAL
Trigger: CAACGCCGACATCATCGAGGCGCTGCACAAGAAGCACAGGGAATGTGAGAGCCCTGAGGTGGACGAGGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464356.6
CDS TCA 72 bp GGGTGGTGGGTCTCGGCACACCTTACACTGTGCTCATaGACGGTCTGGGAACAGTGCTCAGTTCATGGTCTG +
Preference number: 6 (lower is better)
Translates to: GWWVSAHLTLCS*TVWEQCSVHGL
Trigger: CAGACCATGAACTGAGCACTGTTCCCAGACCGTTCATGAGCACAGTGTAAGGTGTGCCGAGACCCACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000368240.6
ENST00000464356.6
ENST00000475587.2
ENST00000489057.1
CDS TCA 72 bp CGGGCGGTGAGATTGTCAACTCTTCATCAGGGAGGCTaGGAGGAGGGGAGTGGGAATCGTCACTTTAATGTC +
Preference number: 6 (lower is better)
Translates to: RAVRLSTLHQGG*EEGSGNRHFNV
Trigger: GACATTAAAGTGACGATTCCCACTCCCCTCCTCTCAGCCTCCCTGATGAAGAGTTGACAATCTCACCGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348159.9
ENST00000360595.7
ENST00000464356.6
CDS TCA 72 bp TGGGCATTGTTCAGATCTAAATGGTCCTCAGTCAAGTaGTGCATTAACCCCTTTCCTGCCTGGGAAGTGATG +
Preference number: 6 (lower is better)
Translates to: WALFRSKWSSVK*CINPFPAWEVM
Trigger: CATCACTTCCCAGGCAGGAAAGGGGTTAATGCATCACTTGACTGAGGACCATTTAGATCTGAACAATGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348159.9