Pregenerated sensors for MED4 (Homo sapiens)
Ensembl gene IDs: ENSG00000136146Ensembl transcript IDs: ENST00000258648.7, ENST00000378586.5, ENST00000417167.2, ENST00000495013.5
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGTGGTTAAAAATGACTCCTGGGGAACTGTAAGAAGAGGAAGGTaGAGGGAAGAAATGGTTGCTTTCCATTCTAAATCTTCACACAAT | + |
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Preference number: 1 (lower is better) Translates to: KVVKNDSWGTVRRGR*REEMVAFHSKSSHN Trigger: ATTGTGTGAAGATTTAGAATGGAAAGCAACCATTTCTTCCCTTCACCTTCCTCTTCTTACAGTTCCCCAGGAGTCATTTTTAACCACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000258648.7 |
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| CDS-3UTR CCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTTCTCCGGGGGTCCCCTaGAACCCAGGTCAGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFSPGVP*NPGQWS Trigger: GCTCCACTGACCTGGGTTCCAGGGGACCCCCGGAGA...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR GCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTGCAGCCGCTCTCGTGTaGTGTTACCACCCGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFAAALV*CYHPPL Trigger: GAGTGGCGGGTGGTAACAGCACACGAGAGCGGCTGC...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258648.7 |
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| CDS-3UTR GCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTATCTGGCAATCTTCCTaGTGCAAGTGCATCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFIWQSS*CKCISW Trigger: CCAGGAGATGCACTTGCAGCAGGAAGATTGCCAGAT...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR CCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTAAACAACTCCAGGACCTaGTTTTCCTCTCCAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVNNSRT*FSSPAC Trigger: ACAGGCTGGAGAGGAAAACCAGGTCCTGGAGTTGTT...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR CCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTAACAACTCCAGGACCTaGTTTTCCTCTCCAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFNNSRT*FSSPAC Trigger: ACAGGCTGGAGAGGAAAACCAGGTCCTGGAGTTGTT...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR CCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATGGAGCAAGGACATCTaGCAATCTTCCTGCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVWSKDI*QSSCCK Trigger: CTTGCAGCAGGAAGATTGCCAGATGTCCTTGCTCCA...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR CCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTACTGCCATGGATACTGTaGAGCAAGGACATCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVLPWIL*SKDIWQ Trigger: TTGCCAGATGTCCTTGCTCCACAGTATCCATGGCAG...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR TCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTAAATTCCCCATCTCGGTaGATTAACAACTCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVNSPSR*INNSRT Trigger: GGTCCTGGAGTTGTTAATTCACCGAGATGGGGAATT...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR TCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTAGAAGGATTGTTCATCTaGCCCAGTAACCCACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVEGLFI*PSNPLL Trigger: GAGAAGTGGGTTACTGGGTCAGATGAACAATCCTTC...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR TCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTGAAGGATTGTTCATCTaGCCCAGTAACCCACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFEGLFI*PSNPLL Trigger: GAGAAGTGGGTTACTGGGTCAGATGAACAATCCTTC...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR TCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTCATCGACATGTCATTTaGCTGCCATGGATACTGTGG | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFHRHVI*LPWILW Trigger: CCACAGTATCCATGGCAGTCAAATGACATGTCGATG...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR GCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTACAGACTCACTACTACTaGTTGAGGAGTCCGTTGACA | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVQTHYY*LRSPLT Trigger: TGTCAACGGACTCCTCAAGCAGTAGTAGTGAGTCTG...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR CCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTAGCATCTCCTGGTAAATaGCCATTCACGCCATTAGTG | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVASPGK*PFTPLV Trigger: CACTAATGGCGTGAATGGCCATTTACCAGGAGATGC...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR GCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTGACATGTCATTTGACTaGCATGGATACTGTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFDMSFD*HGYCGA Trigger: TGCTCCACAGTATCCATGGCAGTCAAATGACATGTC...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR TCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTTGTTTTTGTAGCTGCTaGATATCACTGTCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFCFCSC*ISLSLF Trigger: GAAGAGAGACAGTGATATTCAGCAGCTACAAAAACA...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR TCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATGTTTTTGTAGCTGCTaGATATCACTGTCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVCFCSC*ISLSLF Trigger: GAAGAGAGACAGTGATATTCAGCAGCTACAAAAACA...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR TCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTACAAACTGTACAAATTaGGACAATTTCCCATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFTNCTN*DNFPCL Trigger: GAGGCATGGGAAATTGTCTCAATTTGTACAGTTTGT...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258648.7 |
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| CDS-3UTR GCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTTTGGTAAACAGCTGTTaGCAGTATTTGTTCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFLVNSC*QYLFCF Trigger: GAAGCAGAACAAATACTGGCAACAGCTGTTTACCAA...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR GCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTAACATACAGCATTACTTaGACTGATCCTATGTGCATA | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVTYSIT*TDPMCI Trigger: TATGCACATAGGATCAGTGCAAGTAATGCTGTATGT...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR CCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTGGTGAAGGGAAGAAATaGTTGCTTTCCATTCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFGEGKK*LLSILN Trigger: ATTTAGAATGGAAAGCAACCATTTCTTCCCTTCACC...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258648.7 |
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| CDS-3UTR GCA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTTCATTTTCTTTATTATaGCCAGGAGGTTCCAACAAA | + |
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Preference number: 4 (lower is better) Translates to: LTFNDCTILPKPVFTWVFSFSLL*PGGSNK Trigger: TTTGTTGGAACCTCCTGGGCATAATAAAGAAAATGA...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR GCA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTGACTTTTAATGACTaGACAATTCTACCAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ILTFNDCTILPKPVFTWVLTFND*TILPKP Trigger: TGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS GCA 90 bp | ACAGGACCTCCAAGTCCTCAAGCGCAGACAGCAGCCGCTCTCGTGTaGTGTTACCACCCGCCACTCCCAAACCGCCTCCCAGCCGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TGPPSPQAQTAAALV*CYHPPLPNRLPAAP Trigger: AGGAGCGGCTGGGAGGCGGTTTGGGAGTGGCGGGTGGTAACAGCACACGAGAGCGGCTGCTGTCTGCGCTTGAGGACTTGGAGGTCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000417167.2 |
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| CDS CCA 90 bp | AACAACTCCAGGACCTGGTTTTCCTCTCCAGCCTGTAACAACTTTTaGTTTCTTGAAATTGCCAGCATTTCTATAAGTTCCCTAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: NNSRTWFSSPACNNF*FLEIASISISSLDR Trigger: CCTGTCTAGGGAACTTATAGAAATGCTGGCAATTTCAAGAAACCAAAAGTTGTTACAGGCTGGAGAGGAAAACCAGGTCCTGGAGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258648.7 |
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| CDS-3UTR CAA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTTCATCTCTAAATCAGTaGGGTAGGGTCTCCGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LTFNDCTILPKPVFTWVFSSLNQ*GRVSGG Trigger: ACCCCCGGAGACCCTACCCAACTGATTTAGAGATGA...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS GCA 90 bp | CCAGGTCAGTGGAGCACATACAGCATTACTTGCACTGATCCTATGTaGATACTTAATTATTTCTTCAGAGGAGATAGCACCTTTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: PGQWSTYSITCTDPM*ILNYFFRGDSTFSC Trigger: GCAAGAAAAGGTGCTATCTCCTCTGAAGAAATAATTAAGTATGCACATAGGATCAGTGCAAGTAATGCTGTATGTGCTCCACTGACCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 |
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| CDS-3UTR CAA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTAGAGTTTCTCCTTCGCTaGGTAAACAGCTGTTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ILTFNDCTILPKPVFTWVEFLLR*VNSCCQ Trigger: CTGGCAACAGCTGTTTACCAAGCGAAGGAGAAACTC...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR CAA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATCATCGACATGTCATTaGACTGCCATGGATACTGTG | + |
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Preference number: 5 (lower is better) Translates to: ILTFNDCTILPKPVFTWVSSTCH*TAMDTV Trigger: CACAGTATCCATGGCAGTCAAATGACATGTCGATGA...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS TCA 90 bp | TTTTCTTTATTATGCCCAGGAGGTTCCAACAAAAAGTCACTACTATaGTTTGGTGGTAACATATTCATCGACATGTCATTTGACTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: FSLLCPGGSNKKSLL*FGGNIFIDMSFDCH Trigger: ATGGCAGTCAAATGACATGTCGATGAATATGTTACCACCAAATCATAGTAGTGACTTTTTGTTGGAACCTCCTGGGCATAATAAAGAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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| CDS-3UTR CAA 90 bp | TTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTATTTAGTCACTACTATGATTaGGTGGTAACATATTCATCG | + |
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Preference number: 5 (lower is better) Translates to: LTFNDCTILPKPVFTWVFSHYYD*VVTYSS Trigger: CGATGAATATGTTACCACCAAATCATAGTAGTGACT...AAATACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000378586.5 |
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| CDS-3UTR CAA 90 bp | ATTTTGACTTTTAATGACTGCACAATTCTACCAAAGCCAGTGTTTACCTGGGTAGAAGGGAAGAAATGGTaGCTTTCCATTCTAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: ILTFNDCTILPKPVFTWVEGKKW*LSILNL Trigger: AAGATTTAGAATGGAAAGCAACCATTTCTTCCCTTC...TACCCAGGTAAACACTGGCTTTGGTAGAATTGTGCAGTCATTAAAAGTCAAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258648.7 |
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| CDS GCA 72 bp | CCAAGTCCTCAAGCGCAGACAGCAGCCGCTCTCGTGTaGTGTTACCACCCGCCACTCCCAAACCGCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSPQAQTAAALV*CYHPPLPNRLP Trigger: TGGGAGGCGGTTTGGGAGTGGCGGGTGGTAACAGCACACGAGAGCGGCTGCTGTCTGCGCTTGAGGACTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000258648.7 ENST00000417167.2 |
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| CDS CAA 90 bp | GATTGTTCATCTGACCCAGTAACCCACTTCTCATCTCTAAATCAGTaGGGTAGGGTCTCCGGGGGTCCCCTGGAACCCAGGTCAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DCSSDPVTHFSSLNQ*GRVSGGPLEPRSVE Trigger: CTCCACTGACCTGGGTTCCAGGGGACCCCCGGAGACCCTACCCAACTGATTTAGAGATGAGAAGTGGGTTACTGGGTCAGATGAACAATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 |
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| CDS CCA 72 bp | GGCAATCTTCCTGCTGCAAGTGCATCTCCTGGTAAATaGCCATTCACGCCATTAGTGGAAGGATTGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: GNLPAASASPGK*PFTPLVEGLFI Trigger: GATGAACAATCCTTCCACTAATGGCGTGAATGGCCATTTACCAGGAGATGCACTTGCAGCAGGAAGATTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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| CDS TCA 72 bp | TGGCCATTCACGCCATTAGTGGAAGGATTGTTCATCTaGCCCAGTAACCCACTTCTCATCTCTAAATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: WPFTPLVEGLFI*PSNPLLISKSV Trigger: AACTGATTTAGAGATGAGAAGTGGGTTACTGGGTCAGATGAACAATCCTTCCACTAATGGCGTGAATGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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| CDS GCA 72 bp | TTTGGTGGTAACATATTCATCGACATGTCATTTGACTaGCATGGATACTGTGGAGCAAGGACATCTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: FGGNIFIDMSFD*HGYCGARTSGN Trigger: ATTGCCAGATGTCCTTGCTCCACAGTATCCATGGCAGTCAAATGACATGTCGATGAATATGTTACCACCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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| CDS CAA 90 bp | AGTCACTACTATGATTTGGTGGTAACATATTCATCGACATGTCATTaGACTGCCATGGATACTGTGGAGCAAGGACATCTGGCAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SHYYDLVVTYSSTCH*TAMDTVEQGHLAIF Trigger: GAAGATTGCCAGATGTCCTTGCTCCACAGTATCCATGGCAGTCAAATGACATGTCGATGAATATGTTACCACCAAATCATAGTAGTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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| CDS CAA 72 bp | TATGATTTGGTGGTAACATATTCATCGACATGTCATTaGACTGCCATGGATACTGTGGAGCAAGGACATCTG | + |
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Preference number: 6 (lower is better) Translates to: YDLVVTYSSTCH*TAMDTVEQGHL Trigger: CAGATGTCCTTGCTCCACAGTATCCATGGCAGTCAAATGACATGTCGATGAATATGTTACCACCAAATCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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| CDS GCA 72 bp | TGGAGCACATACAGCATTACTTGCACTGATCCTATGTaGATACTTAATTATTTCTTCAGAGGAGATAGCACC | + |
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Preference number: 6 (lower is better) Translates to: WSTYSITCTDPM*ILNYFFRGDST Trigger: GGTGCTATCTCCTCTGAAGAAATAATTAAGTATGCACATAGGATCAGTGCAAGTAATGCTGTATGTGCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 |
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| CDS CAA 72 bp | GCCCAGGAGGTTCCAACAAAAAGTCACTACTATGATTaGGTGGTAACATATTCATCGACATGTCATTTGACT | + |
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Preference number: 6 (lower is better) Translates to: AQEVPTKSHYYD*VVTYSSTCHLT Trigger: AGTCAAATGACATGTCGATGAATATGTTACCACCAAATCATAGTAGTGACTTTTTGTTGGAACCTCCTGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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| CDS CAA 90 bp | CTTTATTATGCCCAGGAGGTTCCAACAAAAAGTCACTACTATGATTaGGTGGTAACATATTCATCGACATGTCATTTGACTGCCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: LYYAQEVPTKSHYYD*VVTYSSTCHLTAMD Trigger: ATCCATGGCAGTCAAATGACATGTCGATGAATATGTTACCACCAAATCATAGTAGTGACTTTTTGTTGGAACCTCCTGGGCATAATAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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| CDS TCA 72 bp | TTATGCCCAGGAGGTTCCAACAAAAAGTCACTACTATaGTTTGGTGGTAACATATTCATCGACATGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: LCPGGSNKKSLL*FGGNIFIDMSF Trigger: AAATGACATGTCGATGAATATGTTACCACCAAATCATAGTAGTGACTTTTTGTTGGAACCTCCTGGGCATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000258648.7 ENST00000378586.5 ENST00000417167.2 ENST00000495013.5 |
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