Pregenerated sensors for MED30 (Homo sapiens)
Ensembl gene IDs: ENSG00000164758Ensembl transcript IDs: ENST00000297347.7, ENST00000519391.1, ENST00000519879.1, ENST00000522839.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGGAAGATCTCCATGGTGCGGTACACGATGTCCTGCACTGTCTCCTaGCCGATGCGGCACAGCGACGCCGTGTTGACTTCCCGGGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: WKISMVRYTMSCTVS*PMRHSDAVLTSRAA Trigger: GGCCGCCCGGGAAGTCAACACGGCGTCGCTGTGCCGCATCGGGCAGGAGACAGTGCAGGACATCGTGTACCGCACCATGGAGATCTTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS GCA 90 bp | TTCCTCAGGAGCTGGAAGATCTCCATGGTGCGGTACACGATGTCCTaGACTGTCTCCTGCCCGATGCGGCACAGCGACGCCGTGTTGACT | + |
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Preference number: 5 (lower is better) Translates to: FLRSWKISMVRYTMS*TVSCPMRHSDAVLT Trigger: AGTCAACACGGCGTCGCTGTGCCGCATCGGGCAGGAGACAGTGCAGGACATCGTGTACCGCACCATGGAGATCTTCCAGCTCCTGAGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS CCA 90 bp | CACCATTTGGCAGCTGCATGTTCCTCAGGAGCTGGAAGATCTCCATaGTGCGGTACACGATGTCCTGCACTGTCTCCTGCCCGATGCGGC | + |
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Preference number: 5 (lower is better) Translates to: HHLAAACSSGAGRSP*CGTRCPALSPARCG Trigger: GCCGCATCGGGCAGGAGACAGTGCAGGACATCGTGTACCGCACCATGGAGATCTTCCAGCTCCTGAGGAACATGCAGCTGCCAAATGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS TCA 90 bp | CTCTTCACTAGCAAAACGAGGTGGGCCAGCCCGATCATCATTCTTTaGGCCATCTTCTTCCACATATGGAATAAGTTGCTCGACTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: LFTSKTRWASPIIIL*AIFFHIWNKLLDWN Trigger: ATTCCAGTCGAGCAACTTATTCCATATGTGGAAGAAGATGGCTCAAAGAATGATGATCGGGCTGGCCCACCTCGTTTTGCTAGTGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297347.7 |
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| CDS TCA 90 bp | CTCTTCACTAGCAAAACGAGGTGGGCCAGCCCGATCATCATTCTTTaGGCCATCTTCTTCCACATATGGAATAAGTTGCTGGGAATGATT | + |
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Preference number: 5 (lower is better) Translates to: LFTSKTRWASPIIIL*AIFFHIWNKLLGMI Trigger: AATCATTCCCAGCAACTTATTCCATATGTGGAAGAAGATGGCTCAAAGAATGATGATCGGGCTGGCCCACCTCGTTTTGCTAGTGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519391.1 |
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| CDS CCA 72 bp | GCCCGGGCGCCATCCCCGACGCGGCCAACGGAGGGGTaGACATGGCGCGGCTGCAGCTTCAGGCCGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: ARAPSPTRPTEG*TWRGCSFRPEG Trigger: CCCTTCCGGCCTGAAGCTGCAGCCGCGCCATGTCCACCCCTCCGTTGGCCGCGTCGGGGATGGCGCCCGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS TCA 72 bp | CTGTCTCCTGCCCGATGCGGCACAGCGACGCCGTGTTaGCTTCCCGGGCGGCCTGCTGAGCCTGGGGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: LSPARCGTATPC*LPGRPAEPGAR Trigger: CCGGGCCCCAGGCTCAGCAGGCCGCCCGGGAAGTCAACACGGCGTCGCTGTGCCGCATCGGGCAGGAGACAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS GCA 72 bp | CCGACGCGGCCAACGGAGGGGTGGACATGGCGCGGCTaGAGCTTCAGGCCGGAAGGGGCCAGACAGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: PTRPTEGWTWRG*SFRPEGARQQV Trigger: CACCTGCTGTCTGGCCCCTTCCGGCCTGAAGCTGCAGCCGCGCCATGTCCACCCCTCCGTTGGCCGCGTCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS CCA 72 bp | GCAGGTGTCAGGGGTCTGCCCGGAATTGGGAGGCTGTaGGGCCTCAGCGTTGGAACCAGCTTGAGAGACCCC | + |
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Preference number: 6 (lower is better) Translates to: AGVRGLPGIGRL*GLSVGTSLRDP Trigger: GGGGTCTCTCAAGCTGGTTCCAACGCTGAGGCCCCACAGCCTCCCAATTCCGGGCAGACCCCTGACACCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000297347.7 ENST00000519879.1 |
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| CDS CCA 72 bp | GGGCCAGACAGCAGGTGTCAGGGGTCTGCCCGGAATTaGGAGGCTGTGGGGCCTCAGCGTTGGAACCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GPDSRCQGSARN*EAVGPQRWNQL Trigger: AAGCTGGTTCCAACGCTGAGGCCCCACAGCCTCCCAATTCCGGGCAGACCCCTGACACCTGCTGTCTGGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000297347.7 ENST00000519879.1 |
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| CDS GCA 72 bp | TCCATGGTGCGGTACACGATGTCCTGCACTGTCTCCTaGCCGATGCGGCACAGCGACGCCGTGTTGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: SMVRYTMSCTVS*PMRHSDAVLTS Trigger: GGAAGTCAACACGGCGTCGCTGTGCCGCATCGGGCAGGAGACAGTGCAGGACATCGTGTACCGCACCATGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS GCA 72 bp | AGCTGGAAGATCTCCATGGTGCGGTACACGATGTCCTaGACTGTCTCCTGCCCGATGCGGCACAGCGACGCC | + |
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Preference number: 6 (lower is better) Translates to: SWKISMVRYTMS*TVSCPMRHSDA Trigger: GGCGTCGCTGTGCCGCATCGGGCAGGAGACAGTGCAGGACATCGTGTACCGCACCATGGAGATCTTCCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS CCA 72 bp | GCAGCTGCATGTTCCTCAGGAGCTGGAAGATCTCCATaGTGCGGTACACGATGTCCTGCACTGTCTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AAACSSGAGRSP*CGTRCPALSPA Trigger: GGCAGGAGACAGTGCAGGACATCGTGTACCGCACCATGGAGATCTTCCAGCTCCTGAGGAACATGCAGCTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS TCA 72 bp | TTGTTAACCGGTCTTGATATGTTCCAGTGTGGTAAGTaGCACCATTTGGCAGCTGCATGTTCCTCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: LLTGLDMFQCGK*HHLAAACSSGA Trigger: AGCTCCTGAGGAACATGCAGCTGCCAAATGGTGTCACTTACCACACTGGAACATATCAAGACCGGTTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS CAA 90 bp | TGCTCGACTGGAATGGGATCCATCCCACCACAGTTTTCATTGCATTaGTCATATACCAATCTCAGCTTCCTGAAGAGAACTGAAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: CSTGMGSIPPQFSLH*SYTNLSFLKRTESW Trigger: CCAACTTTCAGTTCTCTTCAGGAAGCTGAGATTGGTATATGACAAATGCAATGAAAACTGTGGTGGGATGGATCCCATTCCAGTCGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297347.7 |
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| CDS CAA 90 bp | ACCTCGACTGGAATGGGATCCATCCCACCACAGTTTTCATTGCATTaGTCATATACCAATCTCAGCTTCCTGAAGAGAACTGAAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: TSTGMGSIPPQFSLH*SYTNLSFLKRTESW Trigger: CCAACTTTCAGTTCTCTTCAGGAAGCTGAGATTGGTATATGACAAATGCAATGAAAACTGTGGTGGGATGGATCCCATTCCAGTCGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000519879.1 |
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| CDS CAA 72 bp | TCGACTGGAATGGGATCCATCCCACCACAGTTTTCATaGCATTTGTCATATACCAATCTCAGCTTCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: STGMGSIPPQFS*HLSYTNLSFLK Trigger: CTTCAGGAAGCTGAGATTGGTATATGACAAATGCAATGAAAACTGTGGTGGGATGGATCCCATTCCAGTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000297347.7 ENST00000519879.1 ENST00000522839.1 |
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| CDS CAA 90 bp | TTCTCGACTGGAATGGGATCCATCCCACCACAGTTTTCATTGCATTaGTCATATACCAATCTCAGCTTCCTGAAGAGAACTGAAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: FSTGMGSIPPQFSLH*SYTNLSFLKRTESW Trigger: CCAACTTTCAGTTCTCTTCAGGAAGCTGAGATTGGTATATGACAAATGCAATGAAAACTGTGGTGGGATGGATCCCATTCCAGTCGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522839.1 |
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| CDS CAA 90 bp | ATAAGTTGCTCGACTGGAATGGGATCCATCCCACCACAGTTTTCATaGCATTTGTCATATACCAATCTCAGCTTCCTGAAGAGAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: ISCSTGMGSIPPQFS*HLSYTNLSFLKRTE Trigger: TTCAGTTCTCTTCAGGAAGCTGAGATTGGTATATGACAAATGCAATGAAAACTGTGGTGGGATGGATCCCATTCCAGTCGAGCAACTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000297347.7 |
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| CDS CAA 90 bp | TTGAGTTTCTCGACTGGAATGGGATCCATCCCACCACAGTTTTCATaGCATTTGTCATATACCAATCTCAGCTTCCTGAAGAGAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: LSFSTGMGSIPPQFS*HLSYTNLSFLKRTE Trigger: TTCAGTTCTCTTCAGGAAGCTGAGATTGGTATATGACAAATGCAATGAAAACTGTGGTGGGATGGATCCCATTCCAGTCGAGAAACTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522839.1 |
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| CDS CAA 90 bp | AAAATTACCTCGACTGGAATGGGATCCATCCCACCACAGTTTTCATaGCATTTGTCATATACCAATCTCAGCTTCCTGAAGAGAACTGAA | + |
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Preference number: 6 (lower is better) Translates to: KITSTGMGSIPPQFS*HLSYTNLSFLKRTE Trigger: TTCAGTTCTCTTCAGGAAGCTGAGATTGGTATATGACAAATGCAATGAAAACTGTGGTGGGATGGATCCCATTCCAGTCGAGGTAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000519879.1 |
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