RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED29 (Homo sapiens)

Ensembl gene IDs: ENSG00000063322

Ensembl transcript IDs: ENST00000315588.11, ENST00000594368.5, ENST00000596297.1, ENST00000599417.2, ENST00000600973.5, ENST00000615911.4

Found 631 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGGGCCTaGGTTGCTCCCTGCTCAGACCTGTGGAGCTCAGAGCCTGGGCCC +
Preference number: 1 (lower is better)
Translates to: TPLTQVPLTQAWVGA*VAPCSDLWSSEPGP
Trigger: GGGCCCAGGCTCTGAGCTCCACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR GCA 90 bp GCTCCCTGCTCAGACCTGTGGAGCTCAGAGCCTGGGCCCCTCCACTaGTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGC +
Preference number: 1 (lower is better)
Translates to: APCSDLWSSEPGPLH*SSPRPRTLGSGLTC
Trigger: GCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAGGGGCCCAGGCTCTGAGCTCCACAGGTCTGAGCAGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR TCA 90 bp ACAGAGTGCCCCCAGGGCCAGCAGGTGGTGCGGGTGTCTTGCCCGTaGCCTTGTTGGCACAGTCCAGCAGGGCGGTGTGAATGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: TECPQGQQVVRVSCP*PCWHSPAGRCECPW
Trigger: CCAAGGACATTCACACCGCCCTGCTGGACTGTGCCAACAAGGTCACGGGCAAGACACCCGCACCACCTGCTGGCCCTGGGGGCACTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR GCA 90 bp GATGACCGCCAGGTACTGTGGGTAGGGGAGGCTGTCAGGCTGCACTaGGTCGGGCTTGGTGGCTGTGGGCACCAACGTTGGAGAGTGCTT +
Preference number: 1 (lower is better)
Translates to: DDRQVLWVGEAVRLH*VGLGGCGHQRWRVL
Trigger: AAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCCCTACCCACAGTACCTGGCGGTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR GCA 90 bp AGGACGCTCTTCATTCCCTTTGCACACCACCCACCAACCACTGCCTaGCCCACTCCCTGTCCCCCACTTCACAGAGTGCCCCCAGGGCCA +
Preference number: 1 (lower is better)
Translates to: RTLFIPFAHHPPTTA*PTPCPPLHRVPPGP
Trigger: TGGCCCTGGGGGCACTCTGTGAAGTGGGGGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCGTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR TCA 90 bp CCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTaGCGCAGGCTTGGGTGGGGGCCTGAGTTGCTCCCTGCTCAGACC +
Preference number: 1 (lower is better)
Translates to: PALPQIAQRPSLKFR*RRLGWGPELLPAQT
Trigger: GGTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR CCA 90 bp CCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATaGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAG +
Preference number: 1 (lower is better)
Translates to: PPGRADSPSVLCVRS*TDISTTAGGLCWGK
Trigger: CTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 90 bp CTGCGTCGGGCTTGGTGGCTGTGGGCACCAACGTTGGAGAGTGCTTaGCACTGTCACAACTCTGTGACAGGCACTCATGCGCCAGGCGCA +
Preference number: 1 (lower is better)
Translates to: LRRAWWLWAPTLESA*HCHNSVTGTHAPGA
Trigger: TGCGCCTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR CCA 90 bp GGTAGGGGAGGCTGTCAGGCTGCACTGCGTCGGGCTTGGTGGCTGTaGGCACCAACGTTGGAGAGTGCTTGGCACTGTCACAACTCTGTG +
Preference number: 1 (lower is better)
Translates to: GRGGCQAALRRAWWL*APTLESAWHCHNSV
Trigger: CACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCCCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR GCA 90 bp GGCTTTCACACCCCAACATCTGAGCCTGGGCTGGTAGCTCCGCCCTaGACTTGCTCAGGCCTGAAGGCTGAGGCTGAGCTTCCTGAAGCT +
Preference number: 1 (lower is better)
Translates to: GFHTPTSEPGLVAPP*TCSGLKAEAELPEA
Trigger: AGCTTCAGGAAGCTCAGCCTCAGCCTTCAGGCCTGAGCAAGTGCAGGGCGGAGCTACCAGCCCAGGCTCAGATGTTGGGGTGTGAAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR GCA 90 bp TGCACTGCGTCGGGCTTGGTGGCTGTGGGCACCAACGTTGGAGAGTaGTTGGCACTGTCACAACTCTGTGACAGGCACTCATGCGCCAGG +
Preference number: 1 (lower is better)
Translates to: CTASGLVAVGTNVGE*LALSQLCDRHSCAR
Trigger: CCTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR CCA 90 bp GTGGGGTCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATaGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: VGSRTGGHGVRMWEP*HRRYWVGQFSNQAE
Trigger: CTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR TCA 90 bp GGTGTCTTGCCCGTGACCTTGTTGGCACAGTCCAGCAGGGCGGTGTaGATGTCCTTGGCACAGGAAATCTGGGCTTTGATGACCGCCAGG +
Preference number: 1 (lower is better)
Translates to: GVLPVTLLAQSSRAV*MSLAQEIWALMTAR
Trigger: CCTGGCGGTCATCAAAGCCCAGATTTCCTGTGCCAAGGACATTCACACCGCCCTGCTGGACTGTGCCAACAAGGTCACGGGCAAGACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR GCA 90 bp GCACTCATGCGCCAGGCGCAGGCACAGCTCCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCC +
Preference number: 1 (lower is better)
Translates to: ALMRQAQAQLQLVTE*IELFQALVKALYGS
Trigger: GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTGGAGCTGTGCCTGCGCCTGGCGCATGAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR CCA 90 bp CTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGAGTGCGAATGTaGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAAC +
Preference number: 1 (lower is better)
Translates to: LADVGSRTGGHGVRM*EPWHRRYWVGQFSN
Trigger: GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 90 bp GTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATaGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGG +
Preference number: 1 (lower is better)
Translates to: VLGFPCRRGVQDRRP*SANVGTMAQKILGG
Trigger: CCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 90 bp GGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTaGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTC +
Preference number: 1 (lower is better)
Translates to: GGHGVRMWEPWHRRY*VGQFSNQAESLEAF
Trigger: GAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTaGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACAC +
Preference number: 1 (lower is better)
Translates to: AMECECGNHGTEDTG*GSSPTRLSHLRLSH
Trigger: GTGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 90 bp GTGAATCACAGAGGTATCCATGGTCCTAGGGTTTCCTTGCAGACGTaGGGTCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCAT +
Preference number: 1 (lower is better)
Translates to: VNHRGIHGPRVSLQT*GPGQEAMECECGNH
Trigger: ATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGATACCTCTGTGATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR TCA 90 bp GCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTaGATCACAGAGGTATCCATGGTCCTAGGGTTTCCTTGCAGACGT +
Preference number: 1 (lower is better)
Translates to: AGHFPVFQCGDLGSA*ITEVSMVLGFPCRR
Trigger: ACGTCTGCAAGGAAACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR TCA 90 bp CTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTGTTTGCTaGGTGCAACTCAGTGGTGCCCACCTCCGCCCTGTGCCTGATAGA +
Preference number: 1 (lower is better)
Translates to: LHKYRPWAQDTQCVC*VQLSGAHLRPVPDR
Trigger: TCTATCAGGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACTCAGCAAACACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR GCA 90 bp ACAAATACAGGCCTTGGGCACAAGATACCCAATGTGTTTGCTGAGTaGAACTCAGTGGTGCCCACCTCCGCCCTGTGCCTGATAGATGTG +
Preference number: 1 (lower is better)
Translates to: TNTGLGHKIPNVFAE*NSVVPTSALCLIDV
Trigger: CACATCTATCAGGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACTCAGCAAACACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR CCA 90 bp CTGCATCATGTTGGGTGGGACTATGACTATGTTATCGTACTTATTTaGAGATTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATG +
Preference number: 1 (lower is better)
Translates to: LHHVGWDYDYVIVLI*RLSVVKEMCEGAQM
Trigger: CATCTGGGCACCCTCACACATCTCCTTAACCACACTTAATCTCCAAATAAGTACGATAACATAGTCATAGTCCCACCCAACATGATGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTaGATCATGTTGGGTGGGACTATGACTATGTTATCGTACTTATTT +
Preference number: 1 (lower is better)
Translates to: LLGKGLVVFSCMQDN*IMLGGTMTMLSYLF
Trigger: AAATAAGTACGATAACATAGTCATAGTCCCACCCAACATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGCCACCCACCAACCACTaGCTGCCCCACTCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEPPTNH*LPHSLS
Trigger: GGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGG...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGTCACTCAAGTTCCGCTaGCGCAGGCTTGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPSLKFR*RRLGWG
Trigger: CCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGA...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGGGGGTGCTGGCCCCCTaGATAGACACAGAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEGVLAP*IDTESQ
Trigger: CTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCC...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGGCTCCGCCCTGCACTTaGTCAGGCCTGAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPAPPCT*SGLKAE
Trigger: CTCAGCCTTCAGGCCTGAGCAAGTGCAGGGCGGAGC...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGGGGAGGCTGTCAGGCTaGACTGCGTCGGGCTTGGTG +
Preference number: 2 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGGRLSG*TASGLV
Trigger: CACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCC...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGGACCGCCAGGTACTGTaGGTAGGGGAGGCTGTCAGG +
Preference number: 2 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEDRQVL*VGEAVR
Trigger: CCTGACAGCCTCCCCTACCCACAGTACCTGGCGGTC...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR GCA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCACGCAGGGGCCCGGCCTaGGAGCTCCCTGTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPRRGPA*ELPVGL
Trigger: GAGGCCAACAGGGAGCTCGCAGGCCGGGCCCCTGCG...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTTCTGCTGCCCCCTGCTaGCTCCCGCTGCGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSASAAPC*LPLRCS
Trigger: TGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGA...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCCCTGCTTCCCGGAGCTaGGGCTCAGGCGCCTGGGTT +
Preference number: 2 (lower is better)
Translates to: GTHSWPFPSFPVWGLGLSPASRS*GSGAWV
Trigger: AACCCAGGCGCCTGAGCCCCAGCTCCGGGAAGCAGG...GCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 90 bp GAGAGGAGGCTGCTGTGTTTAGGCCCAGGACGCTCTTCATTCCCTTaGCACACCACCCACCAACCACTGCCTGCCCCACTCCCTGTCCCC +
Preference number: 2 (lower is better)
Translates to: ERRLLCLGPGRSSFP*HTTHQPLPAPLPVP
Trigger: GGGGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCGTCCTGGGCCTAAACACAGCAGCCTCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 90 bp ACTGCGTCGGGCTTGGTGGCTGTGGGCACCAACGTTGGAGAGTGCTaGGCACTGTCACAACTCTGTGACAGGCACTCATGCGCCAGGCGC +
Preference number: 2 (lower is better)
Translates to: TASGLVAVGTNVGEC*ALSQLCDRHSCARR
Trigger: GCGCCTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR TCA 90 bp GGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGCTTGGGTGGGGGCCTaGGTTGCTCCCTGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: GTHSWPFPSFPVWGLGLSAWVGA*VAPCSD
Trigger: GTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGC...GCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGTGGCTCCCGCTGCGGTaGTCAGGCAGGAAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWWLPLR*SGRKRG
Trigger: TCCTCTCTTCCTGCCTGAGCACCGCAGCGGGAGCCA...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTAGGGCCAGCAGGTGGTaGGGGTGTCTTGCCCGTGAC +
Preference number: 2 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSARASRW*GCLARD
Trigger: GTCACGGGCAAGACACCCGCACCACCTGCTGGCCCT...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTATCTGCTGCCCCCTGCTaGCTCCCGCTGCGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLSAAPC*LPLRCS
Trigger: TGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGA...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGCCACCCACCAACCACTaGCTGCCCCACTCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGPPTNH*LPHSLS
Trigger: GGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGG...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGTGGCTCCCGCTGCGGTaGTCAGGCAGGAAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGWLPLR*SGRKRG
Trigger: TCCTCTCTTCCTGCCTGAGCACCGCAGCGGGAGCCA...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGCTCCCGCTGCGGTaGTCAGGCAGGAAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWWLPLR*SGRKRG
Trigger: TCCTCTCTTCCTGCCTGAGCACCGCAGCGGGAGCCA...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGAGTGCAACTCAGTGGTaGCCACCTCCGCCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWSATQW*PPPPCA
Trigger: GGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACT...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCGCTGTCAGGCTGCACTaGGTCGGGCTTGGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLAVRLH*VGLGGC
Trigger: ACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGC...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTTCTGCTGCCCCCTGCTaGCTCCCGCTGCGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVSAAPC*LPLRCS
Trigger: TGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGA...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGAGACCACCTCCCAGCTaGAGACAGTCAGGAAGGACT +
Preference number: 2 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPRPPPS*RQSGRT
Trigger: AGTCCTTCCTGACTGTCTCCAGCTGGGAGGTGGTCT...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGAGAGACACAGAGGAGTaGCACACAGAGACCACCTCC +
Preference number: 2 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPRDTEE*HTETTS
Trigger: GGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCT...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCGTTTCCTTGCAGACGTaGGGTCCAGGACAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: WEGRQSLSLVCALMDRHLVSLQT*GPGQEA
Trigger: GGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAAC...GAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 90 bp GATGTTGTGTTGACACCACCTGGGAGGGCCGACAGTCCCTCAGTCTaGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGG +
Preference number: 2 (lower is better)
Translates to: DVVLTPPGRADSPSV*CVRSWTDISTTAGG
Trigger: CCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTGTCAACACAACATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTCACACCCCAACATCTaGGCCTGGGCTGGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLSHPNI*AWAGSS
Trigger: GGAGCTACCAGCCCAGGCTCAGATGTTGGGGTGTGA...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp TGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCTGTGTGATGTTGTGTTaGCACCACCTGGGAGGGCCG +
Preference number: 2 (lower is better)
Translates to: WEGRQSLSLVCALMDRHLCVMLC*HHLGGP
Trigger: CGGCCCTCCCAGGTGGTGTCAACACAACATCACACA...GAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGCGGGTGTCTTGCCCGTaGCCTTGTTGGCACAGTCCA +
Preference number: 2 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMRVSCP*PCWHSP
Trigger: TGGACTGTGCCAACAAGGTCACGGGCAAGACACCCG...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR GCA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTCGCAGGGGCCCGGCCTaGGAGCTCCCTGTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTRRGPA*ELPVGL
Trigger: GAGGCCAACAGGGAGCTCGCAGGCCGGGCCCCTGCG...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGAGACCACCTCCCAGCTaGAGACAGTCAGGAAGGACT +
Preference number: 2 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGRPPPS*RQSGRT
Trigger: AGTCCTTCCTGACTGTCTCCAGCTGGGAGGTGGTCT...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTAAGGACCCTGGGGTCTaGGCTGACATGCGAGCCGCT +
Preference number: 2 (lower is better)
Translates to: ASSWASLATNCTTPLTQVKDPGV*ADMRAA
Trigger: AGCGGCTCGCATGTCAGCCCAGACCCCAGGGTCCTT...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGGTTTCCTTGCAGACGTaGGGTCCAGGACAGGAGGCC +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWVSLQT*GPGQEA
Trigger: GGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAAC...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGTGTTGACACCACCTaGGAGGGCCGACAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWCVDTT*EGRQSL
Trigger: GAGGGACTGTCGGCCCTCCCAGGTGGTGTCAACACA...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 90 bp TGTCAGGCTGCACTGCGTCGGGCTTGGTGGCTGTGGGCACCAACGTaGGAGAGTGCTTGGCACTGTCACAACTCTGTGACAGGCACTCAT +
Preference number: 2 (lower is better)
Translates to: CQAALRRAWWLWAPT*ESAWHCHNSVTGTH
Trigger: ATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR TCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTCCAGCAGGGCGGTGTaGATGTCCTTGGCACAGGAA +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWSSRAV*MSLAQE
Trigger: TTCCTGTGCCAAGGACATTCACACCGCCCTGCTGGA...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR GCA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCATGGCTCCCGCTGCGGTaGTCAGGCAGGAAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPWLPLR*SGRKRG
Trigger: TCCTCTCTTCCTGCCTGAGCACCGCAGCGGGAGCCA...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGAGACCACCTCCCAGCTaGAGACAGTCAGGAAGGACT +
Preference number: 2 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWRPPPS*RQSGRT
Trigger: AGTCCTTCCTGACTGTCTCCAGCTGGGAGGTGGTCT...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGCTCTGGGCTTGGCTGTaGCCCCTGGAAATGAAGTCC +
Preference number: 2 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMLWAWL*PLEMKS
Trigger: GGACTTCATTTCCAGGGGCCACAGCCAAGCCCAGAG...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCACCCAGGCATCCAGCTaGGCCAGCCTTGCCACAAAT +
Preference number: 2 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLTQASS*ASLATN
Trigger: ATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTGGGT...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGCTGGGCCACTGTGCCTaGCCCCAACATCTCCACTTC +
Preference number: 2 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGLGHCA*PQHLHF
Trigger: GAAGTGGAGATGTTGGGGCCAGGCACAGTGGCCCAG...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR CAA 90 bp GGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTTCCTaGCAGACGTGGGGTCCAGGACAGGAGGCCATGGAGTGCGAATGT +
Preference number: 2 (lower is better)
Translates to: GLSVNHRGIHGPRVS*QTWGPGQEAMECEC
Trigger: ACATTCGCACTCCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGCTTGGGTGGGGGCCTaGGTTGCTCCCTGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKAWVGA*VAPCSD
Trigger: GTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGC...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGATAAATGGGCAAAACTaGGGCTCCCCTGAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPINGQN*GSPEGE
Trigger: TTCTCCTTCAGGGGAGCCTCAGTTTTGCCCATTTAT...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTACGCAGGGGCCCGGCCTaGGAGCTCCCTGTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLRRGPA*ELPVGL
Trigger: GAGGCCAACAGGGAGCTCGCAGGCCGGGCCCCTGCG...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTGGGGTGCTGGCCCCCTaGATAGACACAGAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGGVLAP*IDTESQ
Trigger: CTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCC...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCAGGTGGGGGCCTGAGTTaGTCCCTGCTCAGACCTGTG +
Preference number: 2 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPGGGLS*SLLRPV
Trigger: CACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACC...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACCTGGTAGCTCCGCCCTaGACTTGCTCAGGCCTGAAG +
Preference number: 2 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYLVAPP*TCSGLK
Trigger: CTTCAGGCCTGAGCAAGTGCAGGGCGGAGCTACCAG...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGCCCACCTCCGCCCTGTaGCTGATAGATGTGTATCCA +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWPTSAL*LIDVYP
Trigger: TGGATACACATCTATCAGGCACAGGGCGGAGGTGGG...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCATGTGACAGGCACTCATaGGCCAGGCGCAGGCACAGC +
Preference number: 2 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPCDRHS*ARRRHS
Trigger: GCTGTGCCTGCGCCTGGCGCATGAGTGCCTGTCACA...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTACACCCAGGCAAGAATaGGGGAGGGCCTGTGGAACA +
Preference number: 2 (lower is better)
Translates to: AMECECGNHGTEDTGWGSTPRQE*GRACGT
Trigger: TGTTCCACAGGCCCTCCCCCATTCTTGCCTGGGTGT...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGAGAGACACAGAGGAGTaGCACACAGAGACCACCTCC +
Preference number: 2 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGRDTEE*HTETTS
Trigger: GGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCT...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGACTCTGGGCTTGGCTGTaGCCCCTGGAAATGAAGTCC +
Preference number: 2 (lower is better)
Translates to: RDSASAFLLALHARALQGLWAWL*PLEMKS
Trigger: GGACTTCATTTCCAGGGGCCACAGCCAAGCCCAGAG...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTACTCTGGGCTTGGCTGTaGCCCCTGGAAATGAAGTCC +
Preference number: 2 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLLWAWL*PLEMKS
Trigger: GGACTTCATTTCCAGGGGCCACAGCCAAGCCCAGAG...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTAAGGACCCTGGGGTCTaGGCTGACATGCGAGCCGCT +
Preference number: 2 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGKDPGV*ADMRAA
Trigger: AGCGGCTCGCATGTCAGCCCAGACCCCAGGGTCCTT...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTCCAGTGTGGGGACTTaGGCTCAGCGTGAATCACAG +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWSSVGT*AQRESQ
Trigger: CTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGA...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGGTAGGCCCTGTATCATaGGTGCTGGGCTATCAGGCC +
Preference number: 2 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGVGPVS*VLGYQA
Trigger: GGCCTGATAGCCCAGCACCCATGATACAGGGCCTAC...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGTCACACCCCAACATCTaGGCCTGGGCTGGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: RGGISWDTQLAISQFSSVSHPNI*AWAGSS
Trigger: GGAGCTACCAGCCCAGGCTCAGATGTTGGGGTGTGA...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp GGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGGTCCTAGGGTTTCCTTaGAGACGTGGGGTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GGISWDTQLAISQFSSVGVLGFP*RRGVQD
Trigger: GTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGAC...CCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGCCTTCTTGCCCTACATaGTCGGGCACTTCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWPSCPT*SGTSRK
Trigger: CTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGG...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTACCCAGGCATCCAGCTaGGCCAGCCTTGCCACAAAT +
Preference number: 2 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVTQASS*ASLATN
Trigger: ATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTGGGT...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGTCCAGTGTGGGGACTTaGGCTCAGCGTGAATCACAG +
Preference number: 2 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGSSVGT*AQRESQ
Trigger: CTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGA...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTCCGCCCCCGGCCCGATaGTCAGTTTTATGTGTCAAC +
Preference number: 2 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVPPPAR*SVLCVN
Trigger: GTTGACACATAAAACTGACCATCGGGCCGGGGGCGG...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGACTGCGTCGGGCTTGGTaGCTGTGGGCACCAACGTTG +
Preference number: 2 (lower is better)
Translates to: SAFLLALHARALQGRIRGLRRAW*LWAPTL
Trigger: CAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAG...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCAGCACTGCGTCGGGCTTaGTGGCTGTGGGCACCAACG +
Preference number: 2 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAALRRA*WLWAPT
Trigger: CGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGC...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR GCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAGCTCTTCATTCCCTTTaGACACCACCCACCAACCAC +
Preference number: 2 (lower is better)
Translates to: RDSASAFLLALHARALQGALHSL*TPPTNH
Trigger: GTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGC...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGCGCAGGGGCCCGGCCTaGGAGCTCCCTGTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMRRGPA*ELPVGL
Trigger: GAGGCCAACAGGGAGCTCGCAGGCCGGGCCCCTGCG...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCAGCCTTGCCACAAATTaGACAACGCCCCTCACTCAA +
Preference number: 2 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLSLATN*TTPLTQ
Trigger: TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCT...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTCAGCTGGGCCAGCCTTaGCACAAATTGCACAACGCC +
Preference number: 2 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGQLGQP*HKLHNA
Trigger: GGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTACCTTCTTGCCCTACATaGTCGGGCACTTCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLPSCPT*SGTSRK
Trigger: CTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGG...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTATCTGCTGCCCCCTGCTaGCTCCCGCTGCGGTGCTCA +
Preference number: 2 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLSAAPC*LPLRCS
Trigger: TGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGA...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACAGACCACCTCCCAGCTaGAGACAGTCAGGAAGGACT +
Preference number: 2 (lower is better)
Translates to: VRMWEPWHRRYWVGQFSNRPPPS*RQSGRT
Trigger: AGTCCTTCCTGACTGTCTCCAGCTGGGAGGTGGTCT...GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCACTCTGGGCTTGGCTGTaGCCCCTGGAAATGAAGTCC +
Preference number: 2 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPLWAWL*PLEMKS
Trigger: GGACTTCATTTCCAGGGGCCACAGCCAAGCCCAGAG...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGGACCCTGGGGTCTaGGCTGACATGCGAGCCGCT +
Preference number: 2 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTKDPGV*ADMRAA
Trigger: AGCGGCTCGCATGTCAGCCCAGACCCCAGGGTCCTT...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGACAGAAGATACTGGGTaGGGCAGTTCTCCAACCAGG +
Preference number: 2 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGTEDTG*GSSPTR
Trigger: CCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGT...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTATGGCACAGAAGATACTaGGTGGGGCAGTTCTCCAAC +
Preference number: 2 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLWHRRY*VGQFSN
Trigger: GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCA...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACACAGGACAGGAGGCCATaGAGTGCGAATGTGGGAACC +
Preference number: 2 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTQDRRP*SANVGT
Trigger: GGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTG...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAAGGGGAGGAATTTCCTaGGACACACAGCTGGCCATT +
Preference number: 2 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLRGGIS*DTQLAI
Trigger: AATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTACGTTGGAGAGTGCTTaGCACTGTCACAACTCTGTG +
Preference number: 2 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSATLESA*HCHNSV
Trigger: CACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGT...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CCA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGTGGGCACCAACGTTaGAGAGTGCTTGGCACTGTC +
Preference number: 2 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYCGHQR*RVLGTV
Trigger: GACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACA...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR TCA 90 bp GTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACGACTTGGGCTCAGCGTaGATCACAGAGGTATCCATG +
Preference number: 2 (lower is better)
Translates to: VRMWEPWHRRYWVGQFSNDLGSA*ITEVSM
Trigger: CATGGATACCTCTGTGATTCACGCTGAGCCCAAGTC...GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTCCACCCACCAACCACTaGCTGCCCCACTCCCTGTCC +
Preference number: 2 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCPPTNH*LPHSLS
Trigger: GGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGG...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR-3UTR GCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAAATGTGTTTGCTGAGTaGAACTCAGTGGTGCCCACC +
Preference number: 2 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLNVFAE*NSVVPT
Trigger: GGTGGGCACCACTGAGTTGCACTCAGCAAACACATT...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGQLVTE*IELFQA
Trigger: TGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTG...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CCA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGAGAGACACAGAGGAGTaGCACACAGAGACCACCTCC +
Preference number: 2 (lower is better)
Translates to: RGGISWDTQLAISQFSSVRDTEE*HTETTS
Trigger: GGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCT...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTACATGGAGTGCGAATGTaGGAACCATGGCACAGAAGA +
Preference number: 2 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLHGVRM*EPWHRR
Trigger: TCTTCTGTGCCATGGTTCCCACATTCGCACTCCATG...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTAGGGGAGGAATTTCCTaGGACACACAGCTGGCCATT +
Preference number: 2 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVRGGIS*DTQLAI
Trigger: AATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGTCACACCCCAACATCTaGGCCTGGGCTGGTAGCTCC +
Preference number: 2 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWSHPNI*AWAGSS
Trigger: GGAGCTACCAGCCCAGGCTCAGATGTTGGGGTGTGA...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACACCTTCTTGCCCTACATaGTCGGGCACTTCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTPSCPT*SGTSRK
Trigger: CTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGG...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGCGGTGTGAATGTCCTTaGCACAGGAAATCTGGGCTT +
Preference number: 2 (lower is better)
Translates to: GGISWDTQLAISQFSSVGRCECP*HRKSGL
Trigger: AAGCCCAGATTTCCTGTGCCAAGGACATTCACACCG...CCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGCCCAGGGCCAGCAGGTaGTGCGGGTGTCTTGCCCGT +
Preference number: 2 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMPRASR*CGCLAR
Trigger: ACGGGCAAGACACCCGCACCACCTGCTGGCCCTGGG...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR TCA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCGAAAAAGAGACAGGATaGGAGAGACACAACTGTAAT +
Preference number: 2 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPEKETG*ERHNCN
Trigger: ATTACAGTTGTGTCTCTCTCATCCTGTCTCTTTTTC...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTACTGTCACAACTCTGTaGCAGGCACTCATGCGCCAG +
Preference number: 2 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTTVTTL*QALMRQ
Trigger: CTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGT...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR GCA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAGCTCTTCATTCCCTTTaGACACCACCCACCAACCAC +
Preference number: 2 (lower is better)
Translates to: SASAFLLALHARALQGRIALHSL*TPPTNH
Trigger: GTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGC...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACAAGCCTTGCCACAAATTaGACAACGCCCCTCACTCAA +
Preference number: 2 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTSLATN*TTPLTQ
Trigger: TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCT...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGAATGATTCACCCCGGCTaGGGCCTTTTCACTTCTCCT +
Preference number: 2 (lower is better)
Translates to: SAFLLALHARALQGRIRGMIHPG*GLFTSP
Trigger: AGGAGAAGTGAAAAGGCCCCAGCCGGGGTGAATCAT...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGAACAGAAGATACTGGGTaGGGCAGTTCTCCAACCAGG +
Preference number: 2 (lower is better)
Translates to: SAFLLALHARALQGRIRGTEDTG*GSSPTR
Trigger: CCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGT...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCACGAATGTGGGAACCATaGCACAGAAGATACTGGGTG +
Preference number: 2 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPRMWEP*HRRYWV
Trigger: CACCCAGTATCTTCTGTGCCATGGTTCCCACATTCG...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGTTTTATGTGTCAACTTaGACGGGCTACAGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGFYVST*TGYSPS
Trigger: ACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAA...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTTGTGTTGACACCACCTaGGAGGGCCGACAGTCCCTC +
Preference number: 2 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCCVDTT*EGRQSL
Trigger: GAGGGACTGTCGGCCCTCCCAGGTGGTGTCAACACA...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR-3UTR TCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGAAAAAGAGACAGGATaGGAGAGACACAACTGTAAT +
Preference number: 2 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAEKETG*ERHNCN
Trigger: ATTACAGTTGTGTCTCTCTCATCCTGTCTCTTTTTC...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp GTTTTATGTGTCAACTTGGACGGGCTACAGTCCCAGTTATTCAAACACTCATCTTCACTCAAGTTCCGCTaGCGCAGGCTTGGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: VLCVNLDGLQSQLFKHSSSLKFR*RRLGWG
Trigger: CCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGA...AGATGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR TCA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCAATAAATGGGCAAAACTaGGGCTCCCCTGAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPINGQN*GSPEGE
Trigger: TTCTCCTTCAGGGGAGCCTCAGTTTTGCCCATTTAT...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGAGTGCAACTCAGTGGTaGCCACCTCCGCCCTGTGCC +
Preference number: 2 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMSATQW*PPPPCA
Trigger: GGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACT...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGATTCAATTAGATAAATaGGCAAAACTGAGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWIQLDK*AKLRLP
Trigger: GGGGAGCCTCAGTTTTGCCCATTTATCTAATTGAAT...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAAATTAGCCGTAGTCCTGGCTACTTaGGAGGCTGAGGCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: SRHLSKRCMGPSLLFKLAVVLAT*EAEARG
Trigger: TCCTCTTGCCTCAGCCTCCCAAGTAGCCAGGACTAC...GGCTAATTTAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
3UTR-3UTR TCA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGGACTTGGGCTCAGCGTaGATCACAGAGGTATCCATG +
Preference number: 2 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWDLGSA*ITEVSM
Trigger: CATGGATACCTCTGTGATTCACGCTGAGCCCAAGTC...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GTTTTATGTGTCAACTTGGACGGGCTACAGTCCCAGTTATTCAAACACTCATCTCGGGCTTGGTGGCTGTaGGCACCAACGTTGGAGAGT +
Preference number: 2 (lower is better)
Translates to: VLCVNLDGLQSQLFKHSSRAWWL*APTLES
Trigger: ACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCG...AGATGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR TCA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTGAAAAAGAGACAGGATaGGAGAGACACAACTGTAAT +
Preference number: 2 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVEKETG*ERHNCN
Trigger: ATTACAGTTGTGTCTCTCTCATCCTGTCTCTTTTTC...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGGTCCTAGGGTTTCCTTaGAGACGTGGGGTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMVLGFP*RRGVQD
Trigger: GTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGAC...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGCATGGAGTGCGAATGTaGGAACCATGGCACAGAAGA +
Preference number: 2 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWHGVRM*EPWHRR
Trigger: TCTTCTGTGCCATGGTTCCCACATTCGCACTCCATG...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR GCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTATTGTCTTCAGTTGTATaGAAGATAACTGCATCATGT +
Preference number: 2 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLLSSVV*KITASC
Trigger: ACATGATGCAGTTATCTTGCATACAACTGAAGACAA...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CCA 90 bp GTTTTATGTGTCAACTTGGACGGGCTACAGTCCCAGTTATTCAAACACTCATCTAGAGACACAGAGGAGTaGCACACAGAGACCACCTCC +
Preference number: 2 (lower is better)
Translates to: VLCVNLDGLQSQLFKHSSRDTEE*HTETTS
Trigger: GGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCT...AGATGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 90 bp CATTTACTGTCTCTCACTAGAACATCAGCTCCACAAATACAGGCCTaGGGCACAAGATACCCAATGTGTTTGCTGAGTGCAACTCAGTGG +
Preference number: 2 (lower is better)
Translates to: HLLSLTRTSAPQIQA*GTRYPMCLLSATQW
Trigger: CCACTGAGTTGCACTCAGCAAACACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGAGAGACAGTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR-3UTR CCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTATTCAATTAGATAAATaGGCAAAACTGAGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCIQLDK*AKLRLP
Trigger: GGGGAGCCTCAGTTTTGCCCATTTATCTAATTGAAT...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR-3UTR CAA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGCCTGCGAGCTCCCTGTaGGCCTCTGCTGCCCCCTGC +
Preference number: 3 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGPASSL*ASAAPC
Trigger: GCAGGGGGCAGCAGAGGCCAACAGGGAGCTCGCAGG...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGGGGTGGGGGCCTGAGTaGCTCCCTGCTCAGACCTGT +
Preference number: 3 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPGWGPE*LPAQTC
Trigger: ACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACCC...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp AGGGGAGGCTGTCAGGCTGCACTGCGTCGGGCTTGGTaGCTGTGGGCACCAACGTTGGAGAGTGCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: RGGCQAALRRAW*LWAPTLESAWH
Trigger: GTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR CCA 72 bp GGTAGGGGAGGCTGTCAGGCTGCACTGCGTCGGGCTTaGTGGCTGTGGGCACCAACGTTGGAGAGTGCTTGG +
Preference number: 3 (lower is better)
Translates to: GRGGCQAALRRA*WLWAPTLESAW
Trigger: CCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCCCTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CAA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGCCTGCGAGCTCCCTGTaGGCCTCTGCTGCCCCCTGC +
Preference number: 3 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGPASSL*ASAAPC
Trigger: GCAGGGGGCAGCAGAGGCCAACAGGGAGCTCGCAGG...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp GGCTGTCAGGCTGCACTGCGTCGGGCTTGGTGGCTGTaGGCACCAACGTTGGAGAGTGCTTGGCACTGTCAC +
Preference number: 3 (lower is better)
Translates to: GCQAALRRAWWL*APTLESAWHCH
Trigger: GTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CAA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGCCAGCTGGGCCAGCCTaGCCACAAATTGCACAACGC +
Preference number: 3 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGPAGPA*PQIAQR
Trigger: GCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGG...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGTTGCCCGTGACCTTGTaGGCACAGTCCAGCAGGGCG +
Preference number: 3 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWLPVTL*AQSSRA
Trigger: CGCCCTGCTGGACTGTGCCAACAAGGTCACGGGCAA...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR TCA 72 bp ACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGGGCCTaGGTTGCTCCCTGCTCAGACCTGTGGAGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: TQVPLTQAWVGA*VAPCSDLWSSE
Trigger: CTCTGAGCTCCACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR GCA 72 bp ACCCCAACATCTGAGCCTGGGCTGGTAGCTCCGCCCTaGACTTGCTCAGGCCTGAAGGCTGAGGCTGAGCTT +
Preference number: 3 (lower is better)
Translates to: TPTSEPGLVAPP*TCSGLKAEAEL
Trigger: AAGCTCAGCCTCAGCCTTCAGGCCTGAGCAAGTGCAGGGCGGAGCTACCAGCCCAGGCTCAGATGTTGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR GCA 72 bp CACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTaGGCTCATGGACCGACATCTCCACCACTGCTGGTG +
Preference number: 3 (lower is better)
Translates to: HLGGPTVPQSCV*AHGPTSPPLLV
Trigger: CACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGGTGGTGCGGGTGTCTaGCCCGTGACCTTGTTGGCA +
Preference number: 3 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAGGAGV*PVTLLA
Trigger: TGCCAACAAGGTCACGGGCAAGACACCCGCACCACC...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR GCA 72 bp ACCCAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTaGACAACGCCCCTCACTCAAGTTCCGCTGACGCAG +
Preference number: 3 (lower is better)
Translates to: TQASSWASLATN*TTPLTQVPLTQ
Trigger: CTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp GTGGGGTCCAGGACAGGAGGCCATGGAGTGCGAATGTaGGAACCATGGCACAGAAGATACTGGGTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: VGSRTGGHGVRM*EPWHRRYWVGQ
Trigger: CTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp AGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATaGACCGACATCTCCACCACTGCTGGTGGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: RADSPSVLCVRS*TDISTTAGGLC
Trigger: ACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp TCAAGGCATCCTCCCACCTCTCAGCCTCCGAGTACCTaGGAACCTGGGCACGCACCACCACACCTGGCTAAT +
Preference number: 3 (lower is better)
Translates to: SRHPPTSQPPST*EPGHAPPHLAN
Trigger: ATTAGCCAGGTGTGGTGGTGCGTGCCCAGGTTCCCAGGTACTCGGAGGCTGAGAGGTGGGAGGATGCCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR TCA 72 bp CAACGTTGGAGAGTGCTTGGCACTGTCACAACTCTGTaGCAGGCACTCATGCGCCAGGCGCAGGCACAGCTC +
Preference number: 3 (lower is better)
Translates to: QRWRVLGTVTTL*QALMRQAQAQL
Trigger: GAGCTGTGCCTGCGCCTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR GCA 72 bp GCTGAGTGCAACTCAGTGGTGCCCACCTCCGCCCTGTaGCTGATAGATGTGTATCCATCACCCCACCACCCA +
Preference number: 3 (lower is better)
Translates to: AECNSVVPTSAL*LIDVYPSPHHP
Trigger: TGGGTGGTGGGGTGATGGATACACATCTATCAGGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR GCA 72 bp GGCCTTGGGCACAAGATACCCAATGTGTTTGCTGAGTaGAACTCAGTGGTGCCCACCTCCGCCCTGTGCCTG +
Preference number: 3 (lower is better)
Translates to: GLGHKIPNVFAE*NSVVPTSALCL
Trigger: CAGGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACTCAGCAAACACATTGGGTATCTTGTGCCCAAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR GCA 72 bp CGCCAGGCGCAGGCACAGCTCCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCACTTGTCAAAGCGCTG +
Preference number: 3 (lower is better)
Translates to: RQAQAQLQLVTE*IELFQALVKAL
Trigger: CAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTGGAGCTGTGCCTGCGCCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CAA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCCGCTCTTCATTCCCTTaGCACACCACCCACCAACCA +
Preference number: 3 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLRSSFP*HTTHQP
Trigger: TGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCG...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTGGTCCTAGGGTTTCCTaGCAGACGTGGGGTCCAGGA +
Preference number: 3 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVGPRVS*QTWGPG
Trigger: TCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACC...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGTGCACTGCGTCGGGCTaGGTGGCTGTGGGCACCAAC +
Preference number: 3 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKCTASG*VAVGTN
Trigger: GTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCA...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR GCA 72 bp TCGGGCTTGGTGGCTGTGGGCACCAACGTTGGAGAGTaGTTGGCACTGTCACAACTCTGTGACAGGCACTCA +
Preference number: 3 (lower is better)
Translates to: SGLVAVGTNVGE*LALSQLCDRHS
Trigger: TGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR CCA 72 bp GCTTGGTGGCTGTGGGCACCAACGTTGGAGAGTGCTTaGCACTGTCACAACTCTGTGACAGGCACTCATGCG +
Preference number: 3 (lower is better)
Translates to: AWWLWAPTLESA*HCHNSVTGTHA
Trigger: CGCATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CAA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTCGCTCTTCATTCCCTTaGCACACCACCCACCAACCA +
Preference number: 3 (lower is better)
Translates to: AMECECGNHGTEDTGWGSRSSFP*HTTHQP
Trigger: TGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCG...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp GTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACCTTCAGCCTTCCTTCTaGCCCTACATGCTCGGGCAC +
Preference number: 3 (lower is better)
Translates to: VRMWEPWHRRYWVGQFSNLQPSF*PYMLGH
Trigger: GTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAG...GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR TCA 72 bp TACAGGCCTTGGGCACAAGATACCCAATGTGTTTGCTaGGTGCAACTCAGTGGTGCCCACCTCCGCCCTGTG +
Preference number: 3 (lower is better)
Translates to: YRPWAQDTQCVC*VQLSGAHLRPV
Trigger: CACAGGGCGGAGGTGGGCACCACTGAGTTGCACTCAGCAAACACATTGGGTATCTTGTGCCCAAGGCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR TCA 72 bp CCCGTGACCTTGTTGGCACAGTCCAGCAGGGCGGTGTaGATGTCCTTGGCACAGGAAATCTGGGCTTTGATG +
Preference number: 3 (lower is better)
Translates to: PVTLLAQSSRAV*MSLAQEIWALM
Trigger: CATCAAAGCCCAGATTTCCTGTGCCAAGGACATTCACACCGCCCTGCTGGACTGTGCCAACAAGGTCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR CCA 72 bp AGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATaGCACAGAAGATACTGGGTGGGGCAGTTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: RTGGHGVRMWEP*HRRYWVGQFSN
Trigger: GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp AGAGGTATCCATGGTCCTAGGGTTTCCTTGCAGACGTaGGGTCCAGGACAGGAGGCCATGGAGTGCGAATGT +
Preference number: 3 (lower is better)
Translates to: RGIHGPRVSLQT*GPGQEAMECEC
Trigger: ACATTCGCACTCCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGATACCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp GTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTaGTGGGCTCTGTTGGGGAAAGGGTTAGTTGTCTTC +
Preference number: 3 (lower is better)
Translates to: VCALMDRHLHHC*WALLGKGLVVF
Trigger: GAAGACAACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCACAGCCTTGCCACAAATaGCACAACGCCCCTCACTCA +
Preference number: 3 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPQPCHK*HNAPHS
Trigger: TGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTG...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAGGTCCTAGGGTTTCCTaGCAGACGTGGGGTCCAGGA +
Preference number: 3 (lower is better)
Translates to: SASAFLLALHARALQGRIGPRVS*QTWGPG
Trigger: TCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACC...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTCTGTGGGCACCAACGTaGGAGAGTGCTTGGCACTGT +
Preference number: 3 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGLWAPT*ESAWHC
Trigger: ACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAG...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR CCA 72 bp TGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTaGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGG +
Preference number: 3 (lower is better)
Translates to: CECGNHGTEDTG*GSSPTRLSHLR
Trigger: CCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp GGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTaGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTT +
Preference number: 3 (lower is better)
Translates to: GVRMWEPWHRRY*VGQFSNQAESL
Trigger: AAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp CAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTaGGCTCAGCGTGAATCACAGAGGTATCCATGGTCC +
Preference number: 3 (lower is better)
Translates to: QLAISQFSSVGT*AQRESQRYPWS
Trigger: GGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp TGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTaGGCTCTGTTGGGGAAAGGGTTAGTTGTCTTCAGT +
Preference number: 3 (lower is better)
Translates to: CALMDRHLHHCW*ALLGKGLVVFS
Trigger: ACTGAAGACAACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGCGCTCTTCATTCCCTTaGCACACCACCCACCAACCA +
Preference number: 3 (lower is better)
Translates to: RGGISWDTQLAISQFSSVRSSFP*HTTHQP
Trigger: TGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCG...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTAACTCTTCCAGGCACTaGTCAAAGCGCTGTATGGGT +
Preference number: 3 (lower is better)
Translates to: ASSWASLATNCTTPLTQVNSSRH*SKRCMG
Trigger: ACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTT...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CAA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTGTCTTGCCCGTGACCTaGTTGGCACAGTCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTVLPVT*LAQSSR
Trigger: CCTGCTGGACTGTGCCAACAAGGTCACGGGCAAGAC...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR-3UTR CAA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAACCAGGCTGAGTCACTaGAGGCTTTCACACCCCAAC +
Preference number: 3 (lower is better)
Translates to: SASAFLLALHARALQGRITRLSH*RLSHPN
Trigger: GTTGGGGTGTGAAAGCCTCAAGTGACTCAGCCTGGT...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCGATAACTGCATCATGTaGGGTGGGACTATGACTATG +
Preference number: 3 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLDNCIM*GGTMTM
Trigger: CATAGTCATAGTCCCACCCAACATGATGCAGTTATC...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCACAGGAAATCTGGGCTTaGATGACCGCCAGGTACTGT +
Preference number: 3 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPQEIWA*MTARYC
Trigger: ACAGTACCTGGCGGTCATCAAAGCCCAGATTTCCTG...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599417.2
3UTR TCA 72 bp TTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTaGATCACAGAGGTATCCATGGTCCTAGGGTTTCCT +
Preference number: 3 (lower is better)
Translates to: FPVFQCGDLGSA*ITEVSMVLGFP
Trigger: AGGAAACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR-3UTR CAA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGCAGCCTTGCCACAAATaGCACAACGCCCCTCACTCA +
Preference number: 3 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMQPCHK*HNAPHS
Trigger: TGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTG...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CCA 72 bp GTTGGGTGGGACTATGACTATGTTATCGTACTTATTTaGAGATTAAGTGTGGTTAAGGAGATGTGTGAGGGT +
Preference number: 3 (lower is better)
Translates to: VGWDYDYVIVLI*RLSVVKEMCEG
Trigger: ACCCTCACACATCTCCTTAACCACACTTAATCTCCAAATAAGTACGATAACATAGTCATAGTCCCACCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR GCA 72 bp AAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTaGATCATGTTGGGTGGGACTATGACTATGTTATCG +
Preference number: 3 (lower is better)
Translates to: KGLVVFSCMQDN*IMLGGTMTMLS
Trigger: CGATAACATAGTCATAGTCCCACCCAACATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR TCA 72 bp GTATGCAAGATAACTGCATCATGTTGGGTGGGACTATaGCTATGTTATCGTACTTATTTGGAGATTAAGTGT +
Preference number: 3 (lower is better)
Translates to: VCKITASCWVGL*LCYRTYLEIKC
Trigger: ACACTTAATCTCCAAATAAGTACGATAACATAGTCATAGTCCCACCCAACATGATGCAGTTATCTTGCATAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGAGGGCCCACCAGTTGTaGTGGCGGTTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCERAHQL*WRLRLL
Trigger: CAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCT...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGCGCAGGGGCCCGGCCTaGGAGCTCCCTGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMRRGPA*ELPVGL
Trigger: GAGGCCAACAGGGAGCTCGCAGGCCGGGCCCCTGCG...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGCGCAGGGGCCCGGCCTaGGAGCTCCCTGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGRRGPA*ELPVGL
Trigger: GAGGCCAACAGGGAGCTCGCAGGCCGGGCCCCTGCG...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGGCCCACCAGTTGTGCTaGCGGTTGCGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEAHQLC*RLRLLL
Trigger: CAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGC...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGCCCAGGGCCAGCAGGTaGTGCGGGTGTCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGPRASR*CGCLAR
Trigger: ACGGGCAAGACACCCGCACCACCTGCTGGCCCTGGG...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGAGGGCCAGCAGGTGGTaGGGGTGTCTTGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGRASRW*GCLARD
Trigger: GTCACGGGCAAGACACCCGCACCACCTGCTGGCCCT...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGCCACCCACCAACCACTaGCTGCCCCACTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGPPTNH*LPHSLS
Trigger: GGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGG...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGTGGCTCCCGCTGCGGTaGTCAGGCAGGAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEWLPLR*SGRKRG
Trigger: TCCTCTCTTCCTGCCTGAGCACCGCAGCGGGAGCCA...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTCGCAGGGGCCCGGCCTaGGAGCTCCCTGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AMECECGNHGTEDTGWGSRRGPA*ELPVGL
Trigger: GAGGCCAACAGGGAGCTCGCAGGCCGGGCCCCTGCG...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGAGGCCTGGGCCACTGTaGCTGGCCCCAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCERPGPL*LAPTSP
Trigger: TGGAGATGTTGGGGCCAGGCACAGTGGCCCAGGCCT...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGGCCCACCAGTTGTGCTaGCGGTTGCGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGAHQLC*RLRLLL
Trigger: CAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGC...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCCCCAGGGCCAGCAGGTaGTGCGGGTGTCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPPRASR*CGCLAR
Trigger: ACGGGCAAGACACCCGCACCACCTGCTGGCCCTGGG...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
3UTR CAA 72 bp CACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTaGGGTGGGGGCCTGAGTTGCTCCCTGCTCAGACCT +
Preference number: 4 (lower is better)
Translates to: HNAPHSSSADAG*GGGLSCSLLRP
Trigger: AGGTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGCGGGTGTCTTGCCCGTaGCCTTGTTGGCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPRVSCP*PCWHSP
Trigger: TGGACTGTGCCAACAAGGTCACGGGCAAGACACCCG...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGCACCCCACCACCCACTaGGTGCCTCTGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGHPTTH*VPLWAP
Trigger: GGGAGCCCACAGAGGCACTCAGTGGGTGGTGGGGTG...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGCGGGCTTGGTGGCTGTaGGCACCAACGTTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPRAWWL*APTLES
Trigger: ACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCG...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAACCCAGGGCCAGCAGGTaGTGCGGGTGTCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQPRASR*CGCLAR
Trigger: ACGGGCAAGACACCCGCACCACCTGCTGGCCCTGGG...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGTCTGCTGCCCCCTGCTaGCTCCCGCTGCGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGSAAPC*LPLRCS
Trigger: TGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGA...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCCCTGCTTCCCGGAGCTaGGGCTCAGGCGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLPASRS*GSGAWV
Trigger: AACCCAGGCGCCTGAGCCCCAGCTCCGGGAAGCAGG...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGCTTGGGTGGGGGCCTaGGTTGCTCCCTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGAWVGA*VAPCSD
Trigger: GTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGC...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGCTTGGGTGGGGGCCTaGGTTGCTCCCTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMAWVGA*VAPCSD
Trigger: GTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGC...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGCTGCACCTCCCAAAGTaGTGGGATTACAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPLHLPK*WDYRPG
Trigger: CCCAGGCCTGTAATCCCATCACTTTGGGAGGTGCAG...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAAGTTGTGCTGGCGGTTaGGGCTGCTGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQSCAGG*GCCWGP
Trigger: GGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACT...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGAGGGCCCACCAGTTGTaGTGGCGGTTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGRAHQL*WRLRLL
Trigger: CAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCT...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCAGGGCCCACCAGTTGTaGTGGCGGTTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLRAHQL*WRLRLL
Trigger: CAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCT...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGGGATCGAAGTCCTGTTaGTGTTGCTGCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPGSKSC*CCCRRP
Trigger: CGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCC...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCTGTGACAGGCACTCATaGGCCAGGCGCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: WEGRQSLSLVCALMDRHLCDRHS*ARRRHS
Trigger: GCTGTGCCTGCGCCTGGCGCATGAGTGCCTGTCACA...GAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGGGGAGGCTGTCAGGCTaGACTGCGTCGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGGRLSG*TASGLV
Trigger: CACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCC...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGCCACCCACCAACCACTaGCTGCCCCACTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGPPTNH*LPHSLS
Trigger: GGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGG...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCGGGGTGCTGGCCCCCTaGATAGACACAGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPGVLAP*IDTESQ
Trigger: CTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCC...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCGGTGGGGGCCTGAGTTaGTCCCTGCTCAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPGGGLS*SLLRPV
Trigger: CACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACC...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGCAGCTGGGCCAGCCTTaGCACAAATTGCACAACGCC +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPQLGQP*HKLHNA
Trigger: GGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGCTGCGTCGGGCTTGGTaGCTGTGGGCACCAACGTTG +
Preference number: 4 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWLRRAW*LWAPTL
Trigger: CAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAG...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGCACTGCGTCGGGCTTaGTGGCTGTGGGCACCAACG +
Preference number: 4 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMALRRA*WLWAPT
Trigger: CGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGC...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTGCTGCCCCCTGCTaGCTCCCGCTGCGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: AMECECGNHGTEDTGWGSSAAPC*LPLRCS
Trigger: TGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGA...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCTGCTTCCCGGAGCTaGGGCTCAGGCGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVPASRS*GSGAWV
Trigger: AACCCAGGCGCCTGAGCCCCAGCTCCGGGAAGCAGG...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGGTTTCCTTGCAGACGTaGGGTCCAGGACAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGVSLQT*GPGQEA
Trigger: GGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAAC...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGGTAGGCCCTGTATCATaGGTGCTGGGCTATCAGGCC +
Preference number: 4 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEVGPVS*VLGYQA
Trigger: GGCCTGATAGCCCAGCACCCATGATACAGGGCCTAC...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGCTGCGTCGGGCTTGGTaGCAGGCACAGCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGLRRAW*QAQLQL
Trigger: CAGCTGGAGCTGTGCCTGCCACCAAGCCCGACGCAG...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594368.5
CDS-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGCACTGCGTCGGGCTTaGTGGCAGGCACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAALRRA*WQAQLQ
Trigger: CTGGAGCTGTGCCTGCCACCAAGCCCGACGCAGTGC...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594368.5
CDS-3UTR TCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGTCACTCAAGTTCCGCTaGCGCAGGCTTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGSLKFR*RRLGWG
Trigger: CCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGA...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTCACCCCACCACCCACTaGGTGCCTCTGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVHPTTH*VPLWAP
Trigger: GGGAGCCCACAGAGGCACTCAGTGGGTGGTGGGGTG...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGAGCTTGCTGCTGGGATaGAGCCATCTTCCTCGCGTA +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPSLLLG*SHLPRV
Trigger: TACGCGAGGAAGATGGCTGCATCCCAGCAGCAAGCT...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTAGTTGTGCTGGCGGTTaGGGCTGCTGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVSCAGG*GCCWGP
Trigger: GGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACT...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGTCCTGTTGCTGTTGCTaGAGGAGGCCGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWSCCCC*RRPLWA
Trigger: TGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGA...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGGCTGCTGTGTTTAGGCCCAGGACGCTCTTCATTCCCTTTGCACACCACCCACGGGAGGCTGTCAGGCTaGACTGCGTCGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RLLCLGPGRSSFPLHTTHGRLSG*TASGLV
Trigger: CACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCC...GTGGGTGGTGTGCAAAGGGAATGAAGAGCGTCCTGGGCCTAAACACAGCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCAGTGCAACTCAGTGGTaGCCACCTCCGCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GTHSWPFPSFPVWGLGLSSATQW*PPPPCA
Trigger: GGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACT...GCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTAGTGCAACTCAGTGGTaGCCACCTCCGCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSASATQW*PPPPCA
Trigger: GGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACT...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTGCTGTCAGGCTGCACTaGGTCGGGCTTGGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVAVRLH*VGLGGR
Trigger: CCTGCCACCAAGCCCGACGCAGTGCAGCCTGACAGC...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594368.5
CDS-3UTR CCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTGCCCACCAGTTGTGCTaGCGGTTGCGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVAHQLC*RLRLLL
Trigger: CAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGC...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTATGCAGGAGGCCGCTCTaGGCAGGGCCCACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLCRRPL*AGPTSC
Trigger: ACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCA...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCATCTGCTGCCCCCTGCTaGCTCCCGCTGCGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPSAAPC*LPLRCS
Trigger: TGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGA...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGACACCCAGGCAAGAATaGGGGAGGGCCTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGTPRQE*GRACGT
Trigger: TGTTCCACAGGCCCTCCCCCATTCTTGCCTGGGTGT...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCAAGGACCCTGGGGTCTaGGCTGACATGCGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLKDPGV*ADMRAA
Trigger: AGCGGCTCGCATGTCAGCCCAGACCCCAGGGTCCTT...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAACGGGTGTCTTGCCCGTaGCCTTGTTGGCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQRVSCP*PCWHSP
Trigger: TGGACTGTGCCAACAAGGTCACGGGCAAGACACCCG...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCACTCAAGTTCCGCTaGCGCAGGCTTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: AMECECGNHGTEDTGWGSSLKFR*RRLGWG
Trigger: CCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGA...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGGACTTGGGCTCAGCGTaGATCACAGAGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPDLGSA*ITEVSM
Trigger: CATGGATACCTCTGTGATTCACGCTGAGCCCAAGTC...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTTCCTGTTGCTGTTGCTaGAGGAGGCCGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSASCCCC*RRPLWA
Trigger: TGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGA...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGATGTGACAGGCACTCATaGGCCAGGCGCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RDSASAFLLALHARALQGCDRHS*ARRRHS
Trigger: GCTGTGCCTGCGCCTGGCGCATGAGTGCCTGTCACA...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTGCTGTCAGGCTGCACTaGGTCGGGCTTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVAVRLH*VGLGGC
Trigger: ACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGC...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAGCTGTCAGGCTGCACTaGGTCGGGCTTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: RDSASAFLLALHARALQGAVRLH*VGLGGC
Trigger: ACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGC...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCACCACCCACCAACCACTaGCTGCCCCACTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPPPTNH*LPHSLS
Trigger: GGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGG...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGATGGCTCCCGCTGCGGTaGTCAGGCAGGAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: RDSASAFLLALHARALQGWLPLR*SGRKRG
Trigger: TCCTCTCTTCCTGCCTGAGCACCGCAGCGGGAGCCA...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCACGCAGGGGCCCGGCCTaGGAGCTCCCTGTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGARRGPA*ELPVGL
Trigger: GAGGCCAACAGGGAGCTCGCAGGCCGGGCCCCTGCG...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTGGTGGGGGCCTGAGTTaGTCCCTGCTCAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVGGGLS*SLLRPV
Trigger: CACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACC...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAACGACATCTCCACCACTaGTGGTGGGCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQRHLHH*WWALLG
Trigger: CCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCG...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTCGACATCTCCACCACTaGTGGTGGGCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSARHLHH*WWALLG
Trigger: CCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCG...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCTGGGCTCAAGCCATCTaGCTGCCTGCACCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: WEGRQSLSLVCALMDRHLWAQAI*LPAPPK
Trigger: TTTGGGAGGTGCAGGCAGGCAGATGGCTTGAGCCCA...GAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGGAAGTGCGTTACGACTaGGTCTCTCCCCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPEVRYD*VSPRCF
Trigger: AAAGCAACGGGGAGAGACGCAGTCGTAACGCACTTC...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGGCCCACCAGTTGTGCTaGCGGTTGCGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGISWDTQLAISQFSSVGAHQLC*RLRLLL
Trigger: CAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGC...CCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTTGCAGGAGGCCGCTCTaGGCAGGGCCCACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVCRRPL*AGPTSC
Trigger: ACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCA...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAACGGGCTTGGTGGCTGTaGGCACCAACGTTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQRAWWL*APTLES
Trigger: ACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCG...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGCTGCGTCGGGCTTGGTaGCTGTGGGCACCAACGTTG +
Preference number: 4 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGLRRAW*LWAPTL
Trigger: CAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAG...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAGCACTGCGTCGGGCTTaGTGGCTGTGGGCACCAACG +
Preference number: 4 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPALRRA*WLWAPT
Trigger: CGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGC...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTAAGGACCCTGGGGTCTaGGCTGACATGCGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: AMECECGNHGTEDTGWGSKDPGV*ADMRAA
Trigger: AGCGGCTCGCATGTCAGCCCAGACCCCAGGGTCCTT...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCACCTGCTTCCCGGAGCTaGGGCTCAGGCGCCTGGGTT +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPPASRS*GSGAWV
Trigger: AACCCAGGCGCCTGAGCCCCAGCTCCGGGAAGCAGG...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGTTGTGTGTGCGCTCATaGACCGACATCTCCACCACT +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPLCVRS*TDISTT
Trigger: AGTGGTGGAGATGTCGGTCCATGAGCGCACACACAA...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGCTGAGTGCAACTCAGTaGTGCCCACCTCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGLSATQ*CPPPPC
Trigger: ACAGGGCGGAGGTGGGCACCACTGAGTTGCACTCAG...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 72 bp CTGCTGTGTTTAGGCCCAGGACGCTCTTCATTCCCTTaGCACACCACCCACCAACCACTGCCTGCCCCACTC +
Preference number: 4 (lower is better)
Translates to: LLCLGPGRSSFP*HTTHQPLPAPL
Trigger: GAGTGGGGCAGGCAGTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCGTCCTGGGCCTAAACACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 72 bp TTGACACCACCTGGGAGGGCCGACAGTCCCTCAGTCTaGTGTGTGCGCTCATGGACCGACATCTCCACCACT +
Preference number: 4 (lower is better)
Translates to: LTPPGRADSPSV*CVRSWTDISTT
Trigger: AGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 72 bp GCACTGCGTCGGGCTTGGTGGCTGTGGGCACCAACGTaGGAGAGTGCTTGGCACTGTCACAACTCTGTGACA +
Preference number: 4 (lower is better)
Translates to: ALRRAWWLWAPT*ESAWHCHNSVT
Trigger: TGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS-3UTR TCA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCACTGTCACAACTCTGTaGCAGGCACTCATGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPTVTTL*QALMRQ
Trigger: CTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGT...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAATCCAGCAGGGCGGTGTaGATGTCCTTGGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQSSRAV*MSLAQE
Trigger: TTCCTGTGCCAAGGACATTCACACCGCCCTGCTGGA...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGCTTGGGTGGGGGCCTaGGTTGCTCCCTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RGGISWDTQLAISQFSSVAWVGA*VAPCSD
Trigger: GTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGC...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCGTGAGGGTGCCCAGATaGCAAGGACTAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPVRVPR*QGLDGQ
Trigger: CTGACCATCTAGTCCTTGTCATCTGGGCACCCTCAC...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGTGTGATGTTGTGTTaGCACCACCTGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWCVMLC*HHLGGP
Trigger: CGGCCCTCCCAGGTGGTGTCAACACAACATCACACA...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGCACCCCACCACCCACTaGGTGCCTCTGTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKHPTTH*VPLWAP
Trigger: GGGAGCCCACAGAGGCACTCAGTGGGTGGTGGGGTG...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGGTAGACCGCCGGAAGTaGGTTACGACTGCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGVDRRK*VTTASL
Trigger: GAGAGACGCAGTCGTAACGCACTTCCGGCGGTCTAC...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGCCGCTGAAGCTTGCTaGTGGGATGCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGAAEAC*WDAAIF
Trigger: GAAGATGGCTGCATCCCAGCAGCAAGCTTCAGCGGC...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGCCGCTGAAGCTTGCTaGTGGGATGCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAAAEAC*WDAAIF
Trigger: GAAGATGGCTGCATCCCAGCAGCAAGCTTCAGCGGC...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCGCCGCTGAAGCTTGCTaGTGGGATGCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLAAEAC*WDAAIF
Trigger: GAAGATGGCTGCATCCCAGCAGCAAGCTTCAGCGGC...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGAAGCCGCTGAAGCTTaGTGCTGGGATGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQEAAEA*CWDAAI
Trigger: GATGGCTGCATCCCAGCAGCAAGCTTCAGCGGCTTC...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGGAAGCCGCTGAAGCTTaGTGCTGGGATGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGEAAEA*CWDAAI
Trigger: GATGGCTGCATCCCAGCAGCAAGCTTCAGCGGCTTC...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGAGTTGTGCTGGCGGTTaGGGCTGCTGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: RGGISWDTQLAISQFSSVSCAGG*GCCWGP
Trigger: GGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACT...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAAAGTCCTGTTGCTGTTaGTGCAGGAGGCCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQKSCCC*CRRPLW
Trigger: CCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTT...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGGATCGAAGTCCTGTTaGTGTTGCTGCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAGSKSC*CCCRRP
Trigger: CGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCC...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGGGATCGAAGTCCTGTTaGTGTTGCTGCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWGSKSC*CCCRRP
Trigger: CGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCC...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACAGGGAGGCTGTCAGGCTaGACTGCGTCGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTGRLSG*TASGLV
Trigger: CACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCC...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTCAGCTGGGCCAGCCTTaGCACAAATTGCACAACGCC +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAQLGQP*HKLHNA
Trigger: GGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGCAGCTGGGCCAGCCTTaGCACAAATTGCACAACGCC +
Preference number: 4 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWQLGQP*HKLHNA
Trigger: GGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACGCTCCGCCCTGCACTTaGTCAGGCCTGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VRMWEPWHRRYWVGQFSNAPPCT*SGLKAE
Trigger: CTCAGCCTTCAGGCCTGAGCAAGTGCAGGGCGGAGC...GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTCCTAGGGTTTCCTTaGAGACGTGGGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQVLGFP*RRGVQD
Trigger: GTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGAC...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTAGGCCTGGGCCACTGTaGCTGGCCCCAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVRPGPL*LAPTSP
Trigger: TGGAGATGTTGGGGCCAGGCACAGTGGCCCAGGCCT...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGCAGGAGGCCGCTCTaGGCAGGGCCCACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPCRRPL*AGPTSC
Trigger: ACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCA...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACGACCGCCAGGTACTGTaGGTAGGGGAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYDRQVL*VGEAVR
Trigger: CCTGACAGCCTCCCCTACCCACAGTACCTGGCGGTC...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACGACCGCCAGGTACTGTaGGTAGGGGAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VRMWEPWHRRYWVGQFSNDRQVL*VGEAVR
Trigger: CCTGACAGCCTCCCCTACCCACAGTACCTGGCGGTC...GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGACACCCAGGCAAGAATaGGGGAGGGCCTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWTPRQE*GRACGT
Trigger: TGTTCCACAGGCCCTCCCCCATTCTTGCCTGGGTGT...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGAGAGACACAGAGGAGTaGCACACAGAGACCACCTCC +
Preference number: 4 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWRDTEE*HTETTS
Trigger: GGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCT...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGCTCTGGGCTTGGCTGTaGCCCCTGGAAATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGLWAWL*PLEMKS
Trigger: GGACTTCATTTCCAGGGGCCACAGCCAAGCCCAGAG...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGACAGAAGATACTGGGTaGGGCAGTTCTCCAACCAGG +
Preference number: 4 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGTEDTG*GSSPTR
Trigger: CCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGT...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGTCCAGTGTGGGGACTTaGGCTCAGCGTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWSSVGT*AQRESQ
Trigger: CTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGA...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAACCGCCCCCGGCCCGATaGTCAGTTTTATGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQPPPAR*SVLCVN
Trigger: GTTGACACATAAAACTGACCATCGGGCCGGGGGCGG...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCCATCTCCACCACTGCTaGTGGGCTCTGTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPHLHHC*WALLGK
Trigger: TTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATG...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAACTGTCACAACTCTGTaGCAGGCACTCATGCGCCAG +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQTVTTL*QALMRQ
Trigger: CTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGT...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCCAGCAGGGCGGTGTaGATGTCCTTGGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: AMECECGNHGTEDTGWGSSSRAV*MSLAQE
Trigger: TTCCTGTGCCAAGGACATTCACACCGCCCTGCTGGA...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCATCACTCAAGTTCCGCTaGCGCAGGCTTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPSLKFR*RRLGWG
Trigger: CCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGA...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTTCACTCAAGTTCCGCTaGCGCAGGCTTGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGSLKFR*RRLGWG
Trigger: CCCCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGA...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTAGACCGCCGGAAGTaGGTTACGACTGCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLVDRRK*VTTASL
Trigger: GAGAGACGCAGTCGTAACGCACTTCCGGCGGTCTAC...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGAGCTTGCTGCTGGGATaGAGCCATCTTCCTCGCGTA +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGSLLLG*SHLPRV
Trigger: TACGCGAGGAAGATGGCTGCATCCCAGCAGCAAGCT...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGAAGTTGTGCTGGCGGTTaGGGCTGCTGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SAFLLALHARALQGRIRGSCAGG*GCCWGP
Trigger: GGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACT...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGAGGGCCCACCAGTTGTaGTGGCGGTTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ESQLGAGDRRQLKGTKRERAHQL*WRLRLL
Trigger: CAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCT...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTTGTGACAGGCACTCATaGGCCAGGCGCAGGCACAGC +
Preference number: 4 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGCDRHS*ARRRHS
Trigger: GCTGTGCCTGCGCCTGGCGCATGAGTGCCTGTCACA...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCATGGCTCCCGCTGCGGTaGTCAGGCAGGAAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPWLPLR*SGRKRG
Trigger: TCCTCTCTTCCTGCCTGAGCACCGCAGCGGGAGCCA...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGAGCCTTGCCACAAATTaGACAACGCCCCTCACTCAA +
Preference number: 4 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGSLATN*TTPLTQ
Trigger: TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCT...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTCTGGTAGCTCCGCCCTaGACTTGCTCAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVLVAPP*TCSGLK
Trigger: CTTCAGGCCTGAGCAAGTGCAGGGCGGAGCTACCAG...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACCTGGTAGCTCCGCCCTaGACTTGCTCAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VRMWEPWHRRYWVGQFSNLVAPP*TCSGLK
Trigger: CTTCAGGCCTGAGCAAGTGCAGGGCGGAGCTACCAG...GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGCCCACCTCCGCCCTGTaGCTGATAGATGTGTATCCA +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGPTSAL*LIDVYP
Trigger: TGGATACACATCTATCAGGCACAGGGCGGAGGTGGG...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAACCCACCTCCGCCCTGTaGCTGATAGATGTGTATCCA +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQPTSAL*LIDVYP
Trigger: TGGATACACATCTATCAGGCACAGGGCGGAGGTGGG...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCAAGTGCAACTCAGTGGTaGCCACCTCCGCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPSATQW*PPPPCA
Trigger: GGCACAGGGCGGAGGTGGGCACCACTGAGTTGCACT...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGCCATCTGCCTGCCTaGACCTCCCAAAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: RDSASAFLLALHARALQGSHLPA*TSQSDG
Trigger: CCCATCACTTTGGGAGGTGCAGGCAGGCAGATGGCT...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAAGCCATCTGCCTGCCTaGACCTCCCAAAGTGATGGG +
Preference number: 4 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLSHLPA*TSQSDG
Trigger: CCCATCACTTTGGGAGGTGCAGGCAGGCAGATGGCT...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGTGCGTCTCTCCCCGTTaGTTTTCAGCATCCCTATTT +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPCVSPR*FSASLF
Trigger: AAATAGGGATGCTGAAAAGCAACGGGGAGAGACGCA...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTGGGCACCAACGTTaGAGAGTGCTTGGCACTGTC +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLCGHQR*RVLGTV
Trigger: GACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACA...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCTGTGGGCACCAACGTTaGAGAGTGCTTGGCACTGTC +
Preference number: 4 (lower is better)
Translates to: GTHSWPFPSFPVWGLGLSCGHQR*RVLGTV
Trigger: GACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACA...GCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTCGGGCTTGGTGGCTGTaGGCACCAACGTTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVRAWWL*APTLES
Trigger: ACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCG...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCACTGCGTCGGGCTTGGTaGCTGTGGGCACCAACGTTG +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPLRRAW*LWAPTL
Trigger: CAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAG...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGTTGGCACAGGAAATCTaGGCTTTGATGACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWLAQEI*ALMTAR
Trigger: CCTGGCGGTCATCAAAGCCCAGATTTCCTGTGCCAA...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTTCTGCTGCCCCCTGCTaGCTCCCGCTGCGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTSAAPC*LPLRCS
Trigger: TGAGCACCGCAGCGGGAGCCAGCAGGGGGCAGCAGA...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCAGACCACCTCCCAGCTaGAGACAGTCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLRPPPS*RQSGRT
Trigger: AGTCCTTCCTGACTGTCTCCAGCTGGGAGGTGGTCT...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGAGACCACCTCCCAGCTaGAGACAGTCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGRPPPS*RQSGRT
Trigger: AGTCCTTCCTGACTGTCTCCAGCTGGGAGGTGGTCT...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCAGACCACCTCCCAGCTaGAGACAGTCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: GTHSWPFPSFPVWGLGLSRPPPS*RQSGRT
Trigger: AGTCCTTCCTGACTGTCTCCAGCTGGGAGGTGGTCT...GCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTAGACCACCTCCCAGCTaGAGACAGTCAGGAAGGACT +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSARPPPS*RQSGRT
Trigger: AGTCCTTCCTGACTGTCTCCAGCTGGGAGGTGGTCT...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAACCCAGGCATCCAGCTaGGCCAGCCTTGCCACAAAT +
Preference number: 4 (lower is better)
Translates to: RDSASAFLLALHARALQGTQASS*ASLATN
Trigger: ATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTGGGT...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCATGATTCACCCCGGCTaGGGCCTTTTCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: WEGRQSLSLVCALMDRHLMIHPG*GLFTSP
Trigger: AGGAGAAGTGAAAAGGCCCCAGCCGGGGTGAATCAT...GAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTCAGGACAGGAGGCCATaGAGTGCGAATGTGGGAACC +
Preference number: 4 (lower is better)
Translates to: AMECECGNHGTEDTGWGSQDRRP*SANVGT
Trigger: GGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTG...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTGTTTCCTTGCAGACGTaGGGTCCAGGACAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVVSLQT*GPGQEA
Trigger: GGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAAC...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGTCCAGTGTGGGGACTTaGGCTCAGCGTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMSSVGT*AQRESQ
Trigger: CTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGA...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTCCAGTGTGGGGACTTaGGCTCAGCGTGAATCACAG +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLSSVGT*AQRESQ
Trigger: CTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGA...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGACCGCCCCCGGCCCGATaGTCAGTTTTATGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: RDSASAFLLALHARALQGPPPAR*SVLCVN
Trigger: GTTGACACATAAAACTGACCATCGGGCCGGGGGCGG...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTCATCTCCACCACTGCTaGTGGGCTCTGTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAHLHHC*WALLGK
Trigger: TTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATG...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACCTGAGTGCAACTCAGTaGTGCCCACCTCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYLSATQ*CPPPPC
Trigger: ACAGGGCGGAGGTGGGCACCACTGAGTTGCACTCAG...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTCTGGGCCACTGTGCCTaGCCCCAACATCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVLGHCA*PQHLHF
Trigger: GAAGTGGAGATGTTGGGGCCAGGCACAGTGGCCCAG...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR CAA 72 bp GGCTTGGTGGCTGTGGGCACCAACGTTGGAGAGTGCTaGGCACTGTCACAACTCTGTGACAGGCACTCATGC +
Preference number: 4 (lower is better)
Translates to: GLVAVGTNVGEC*ALSQLCDRHSC
Trigger: GCATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS-3UTR TCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAACTGTCACAACTCTGTaGCAGGCACTCATGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLTVTTL*QALMRQ
Trigger: CTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGT...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATCACACCCCAACATCTaGGCCTGGGCTGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPSHPNI*AWAGSS
Trigger: GGAGCTACCAGCCCAGGCTCAGATGTTGGGGTGTGA...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGACTTGGGCTCAGCGTaGATCACAGAGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQDLGSA*ITEVSM
Trigger: CATGGATACCTCTGTGATTCACGCTGAGCCCAAGTC...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTGAGGGTGCCCAGATaGCAAGGACTAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLVRVPR*QGLDGQ
Trigger: CTGACCATCTAGTCCTTGTCATCTGGGCACCCTCAC...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACCTGCACCTCCCAAAGTaGTGGGATTACAGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYLHLPK*WDYRPG
Trigger: CCCAGGCCTGTAATCCCATCACTTTGGGAGGTGCAG...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR TCA 90 bp TGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCAAAACAGGGTCTCCATaGACCAAGCTGGAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: WEGRQSLSLVCALMDRHLKTGSP*TKLECS
Trigger: ACTGCACTCCAGCTTGGTTCATGGAGACCCTGTTTT...GAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCATCCTGTTGCTGTTGCTaGAGGAGGCCGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPSCCCC*RRPLWA
Trigger: TGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGA...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACAAGTCCTGTTGCTGTTaGTGCAGGAGGCCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYKSCCC*CRRPLW
Trigger: CCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTT...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPQLVTE*IELFQA
Trigger: TGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTG...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCAGGGAGGCTGTCAGGCTaGACTGCGTCGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAGRLSG*TASGLV
Trigger: CACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCC...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGCTCTTCATTCCCTTTaGACACCACCCACCAACCAC +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGALHSL*TPPTNH
Trigger: GTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGC...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGAGCTCCGCCCTGCACTTaGTCAGGCCTGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SAFLLALHARALQGRIRGAPPCT*SGLKAE
Trigger: CTCAGCCTTCAGGCCTGAGCAAGTGCAGGGCGGAGC...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGTTCAGCCTTCCTTCTTaGCCTACATGCTCGGGCACT +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGFSLPS*PTCSGT
Trigger: AGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAA...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTTCAGCCTTCCTTCTTaGCCTACATGCTCGGGCACT +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLFSLPS*PTCSGT
Trigger: AGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAA...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGCGATCACAGCTCACTaGAGCTTCAACCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAAITAH*SFNLSS
Trigger: GCTTGAGAGGTTGAAGCTGCAGTGAGCTGTGATCGC...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGCGATCACAGCTCACTaGAGCTTCAACCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMAITAH*SFNLSS
Trigger: GCTTGAGAGGTTGAAGCTGCAGTGAGCTGTGATCGC...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCATGCAGGAGGCCGCTCTaGGCAGGGCCCACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGACRRPL*AGPTSC
Trigger: ACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCA...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGTGTGGGCACCAACGTTaGAGAGTGCTTGGCACTGTC +
Preference number: 4 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGCGHQR*RVLGTV
Trigger: GACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACA...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTTTGGCACAGGAAATCTaGGCTTTGATGACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSALAQEI*ALMTAR
Trigger: CCTGGCGGTCATCAAAGCCCAGATTTCCTGTGCCAA...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGCCCAGGGCCAGCAGGTaGTGCGGGTGTCTTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWPRASR*CGCLAR
Trigger: ACGGGCAAGACACCCGCACCACCTGCTGGCCCTGGG...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTAGAGACACAGAGGAGTaGCACACAGAGACCACCTCC +
Preference number: 4 (lower is better)
Translates to: AMECECGNHGTEDTGWGSRDTEE*HTETTS
Trigger: GGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCT...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGAAGGACCCTGGGGTCTaGGCTGACATGCGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: ESQLGAGDRRQLKGTKREKDPGV*ADMRAA
Trigger: AGCGGCTCGCATGTCAGCCCAGACCCCAGGGTCCTT...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACACCCAGGCATCCAGCTaGGCCAGCCTTGCCACAAAT +
Preference number: 4 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYTQASS*ASLATN
Trigger: ATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTGGGT...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTATGATTCACCCCGGCTaGGGCCTTTTCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAMIHPG*GLFTSP
Trigger: AGGAGAAGTGAAAAGGCCCCAGCCGGGGTGAATCAT...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGTGGCACAGAAGATACTaGGTGGGGCAGTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGWHRRY*VGQFSN
Trigger: GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCA...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGTGGCACAGAAGATACTaGGTGGGGCAGTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGWHRRY*VGQFSN
Trigger: GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCA...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAAGGGGAGGAATTTCCTaGGACACACAGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQRGGIS*DTQLAI
Trigger: AATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTTTGTGTGTGCGCTCATaGACCGACATCTCCACCACT +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSALCVRS*TDISTT
Trigger: AGTGGTGGAGATGTCGGTCCATGAGCGCACACACAA...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACATGTGTTGACACCACCTaGGAGGGCCGACAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTCVDTT*EGRQSL
Trigger: GAGGGACTGTCGGCCCTCCCAGGTGGTGTCAACACA...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTCTGAGTGCAACTCAGTaGTGCCCACCTCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGLSATQ*CPPPPC
Trigger: ACAGGGCGGAGGTGGGCACCACTGAGTTGCACTCAG...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCCTGGTCTTGAATTCCTaGGCTCAAGCCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SVLCVRSWTDISTTAGGLLVLNS*AQAICL
Trigger: CAGGCAGATGGCTTGAGCCCAGGAATTCAAGACCAG...GAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR TCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCTTCAGCTGCGGGATaGGCATCTTATAACGCTGCA +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVPSAAG*ASYNAA
Trigger: TGCAGCGTTATAAGATGCTCATCCCGCAGCTGAAGG...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCATCCAGCAGGGCGGTGTaGATGTCCTTGGCACAGGAA +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPSSRAV*MSLAQE
Trigger: TTCCTGTGCCAAGGACATTCACACCGCCCTGCTGGA...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGACGGGTGTCTTGCCCGTaGCCTTGTTGGCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: SAFLLALHARALQGRIRGRVSCP*PCWHSP
Trigger: TGGACTGTGCCAACAAGGTCACGGGCAAGACACCCG...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp GGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGGTGAGGGTGCCCAGATaGCAAGGACTAGATGGTCAG +
Preference number: 4 (lower is better)
Translates to: GGISWDTQLAISQFSSVGVRVPR*QGLDGQ
Trigger: CTGACCATCTAGTCCTTGTCATCTGGGCACCCTCAC...CCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGTGTGTGATGTTGTGTTaGCACCACCTGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RGGISWDTQLAISQFSSVCVMLC*HHLGGP
Trigger: CGGCCCTCCCAGGTGGTGTCAACACAACATCACACA...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAACCCAATGTGTTTGCTaGGTGCAACTCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLTQCVC*VQLSGA
Trigger: GGCACCACTGAGTTGCACTCAGCAAACACATTGGGT...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCAGAAGCCGCTGAAGCTTaGTGCTGGGATGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPEAAEA*CWDAAI
Trigger: GATGGCTGCATCCCAGCAGCAAGCTTCAGCGGCTTC...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAAATTAGCCAGTTGTGCTGGCGGTTaGGGCTGCTGCTGGGGACCC +
Preference number: 4 (lower is better)
Translates to: SRHLSKRCMGPSLLFKLASCAGG*GCCWGP
Trigger: GGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACT...GGCTAATTTAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR GCA 90 bp AGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAAGGGCCCACCAGTTGTaGTGGCGGTTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RTLPGTCQSAVWVHHCSLRAHQL*WRLRLL
Trigger: CAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCT...TAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR GCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCAGGATCGAAGTCCTGTTaGTGTTGCTGCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPGSKSC*CCCRRP
Trigger: CGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCC...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGCCACCCACCAACCACTaGCTGCCCCACTCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWPPTNH*LPHSLS
Trigger: GGACAGGGAGTGGGGCAGGCAGTGGTTGGTGGGTGG...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTGGGGTGCTGGCCCCCTaGATAGACACAGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTGVLAP*IDTESQ
Trigger: CTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCC...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGAGCCTTGCCACAAATTaGACAACGCCCCTCACTCAA +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGSLATN*TTPLTQ
Trigger: TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCT...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGCTGGTAGCTCCGCCCTaGACTTGCTCAGGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ESQLGAGDRRQLKGTKRELVAPP*TCSGLK
Trigger: CTTCAGGCCTGAGCAAGTGCAGGGCGGAGCTACCAG...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTGTCCTAGGGTTTCCTTaGAGACGTGGGGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGVLGFP*RRGVQD
Trigger: GTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGAC...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGGCTGCTGTGTTTAGGCCCAGGACGCTCTTCATTCCCTTTGCACACCACCCACCCTTCTTGCCCTACATaGTCGGGCACTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLLCLGPGRSSFPLHTTHPSCPT*SGTSRK
Trigger: CTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGG...GTGGGTGGTGTGCAAAGGGAATGAAGAGCGTCCTGGGCCTAAACACAGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGCCTTCTTGCCCTACATaGTCGGGCACTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGPSCPT*SGTSRK
Trigger: CTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGG...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGTTCAGCCTTCCTTCTTaGCCTACATGCTCGGGCACT +
Preference number: 4 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGFSLPS*PTCSGT
Trigger: AGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAA...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCTCAGTCTTGTGTGTaGGCTCATGGACCGACATCT +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVPQSCV*AHGPTS
Trigger: AGATGTCGGTCCATGAGCGCACACACAAGACTGAGG...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGAATGTGTTTGCTGAGTaGAACTCAGTGGTGCCCACC +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGNVFAE*NSVVPT
Trigger: GGTGGGCACCACTGAGTTGCACTCAGCAAACACATT...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAGCCCACCAGTTGTGCTaGCGGTTGCGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RTLPGTCQSAVWVHHCSLAHQLC*RLRLLL
Trigger: CAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGC...TAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR CCA 90 bp TCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAAATTAGCCTGCAGGAGGCCGCTCTaGGCAGGGCCCACCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SRHLSKRCMGPSLLFKLACRRPL*AGPTSC
Trigger: ACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCA...GGCTAATTTAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR CCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAACGTTGGAGAGTGCTTaGCACTGTCACAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQTLESA*HCHNSV
Trigger: CACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGT...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCACGTTGGAGAGTGCTTaGCACTGTCACAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: GTHSWPFPSFPVWGLGLSTLESA*HCHNSV
Trigger: CACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGT...GCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGATTGGCACAGGAAATCTaGGCTTTGATGACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: RDSASAFLLALHARALQGLAQEI*ALMTAR
Trigger: CCTGGCGGTCATCAAAGCCCAGATTTCCTGTGCCAA...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGCGGTGTGAATGTCCTTaGCACAGGAAATCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGRCECP*HRKSGL
Trigger: AAGCCCAGATTTCCTGTGCCAAGGACATTCACACCG...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTCGGTGTGAATGTCCTTaGCACAGGAAATCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSARCECP*HRKSGL
Trigger: AAGCCCAGATTTCCTGTGCCAAGGACATTCACACCG...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGCGAATGTGGGAACCATaGCACAGAAGATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGRMWEP*HRRYWV
Trigger: CACCCAGTATCTTCTGTGCCATGGTTCCCACATTCG...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGCGAATGTGGGAACCATaGCACAGAAGATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGRMWEP*HRRYWV
Trigger: CACCCAGTATCTTCTGTGCCATGGTTCCCACATTCG...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGCATGGAGTGCGAATGTaGGAACCATGGCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMHGVRM*EPWHRR
Trigger: TCTTCTGTGCCATGGTTCCCACATTCGCACTCCATG...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTCAGGACAGGAGGCCATaGAGTGCGAATGTGGGAACC +
Preference number: 4 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGQDRRP*SANVGT
Trigger: GGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTG...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGCAGGACAGGAGGCCATaGAGTGCGAATGTGGGAACC +
Preference number: 4 (lower is better)
Translates to: RGGISWDTQLAISQFSSVQDRRP*SANVGT
Trigger: GGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTG...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGAGGGGAGGAATTTCCTaGGACACACAGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGRGGIS*DTQLAI
Trigger: AATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 72 bp CAAATACAGGCCTTGGGCACAAGATACCCAATGTGTTaGCTGAGTGCAACTCAGTGGTGCCCACCTCCGCCC +
Preference number: 4 (lower is better)
Translates to: QIQALGTRYPMC*LSATQWCPPPP
Trigger: GGGCGGAGGTGGGCACCACTGAGTTGCACTCAGCAAACACATTGGGTATCTTGTGCCCAAGGCCTGTATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR TCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGCTTGGGTGGGGGCCTaGGTTGCTCCCTGCTCAGAC +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLAWVGA*VAPCSD
Trigger: GTCTGAGCAGGGAGCAACTCAGGCCCCCACCCAAGC...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAGACTTGGGCTCAGCGTaGATCACAGAGGTATCCATG +
Preference number: 4 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPDLGSA*ITEVSM
Trigger: CATGGATACCTCTGTGATTCACGCTGAGCCCAAGTC...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGATAAATGGGCAAAACTaGGGCTCCCCTGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGINGQN*GSPEGE
Trigger: TTCTCCTTCAGGGGAGCCTCAGTTTTGCCCATTTAT...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGTGTTGGGTGGGACTATaGCTATGTTATCGTACTTAT +
Preference number: 4 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCECWVGL*LCYRTY
Trigger: ATAAGTACGATAACATAGTCATAGTCCCACCCAACA...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGGTAGACCGCCGGAAGTaGGTTACGACTGCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: ESQLGAGDRRQLKGTKREVDRRK*VTTASL
Trigger: GAGAGACGCAGTCGTAACGCACTTCCGGCGGTCTAC...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GTCACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCGCCGCTGAAGCTTGCTaGTGGGATGCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: VTECIELFQALVKALYGSAAEAC*WDAAIF
Trigger: GAAGATGGCTGCATCCCAGCAGCAAGCTTCAGCGGC...GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000600973.5
CDS-3UTR GCA 90 bp GTCACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCGAAGCCGCTGAAGCTTaGTGCTGGGATGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: VTECIELFQALVKALYGSEAAEA*CWDAAI
Trigger: GATGGCTGCATCCCAGCAGCAAGCTTCAGCGGCTTC...GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000600973.5
CDS-3UTR GCA 90 bp CATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTCCTGTTGCTGTTGCTaGAGGAGGCCGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HRTLPGTCQSAVWVHHCSSCCCC*RRPLWA
Trigger: TGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGA...AGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR GCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCATCCTGTTGCTGTTGCTaGAGGAGGCCGCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGASCCCC*RRPLWA
Trigger: TGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGA...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGAAGTCCTGTTGCTGTTaGTGCAGGAGGCCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKKSCCC*CRRPLW
Trigger: CCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTT...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: AMECECGNHGTEDTGWGSQLVTE*IELFQA
Trigger: TGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTG...ACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTAGGGCCAGCAGGTGGTaGGGGTGTCTTGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCRASRW*GCLARD
Trigger: GTCACGGGCAAGACACCCGCACCACCTGCTGGCCCT...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAAGGGCCAGCAGGTGGTaGGGGTGTCTTGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLRASRW*GCLARD
Trigger: GTCACGGGCAAGACACCCGCACCACCTGCTGGCCCT...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTCCTCAGTCTTGTGTGTaGGCTCATGGACCGACATCT +
Preference number: 4 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVPQSCV*AHGPTS
Trigger: AGATGTCGGTCCATGAGCGCACACACAAGACTGAGG...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTCCTCAGTCTTGTGTGTaGGCTCATGGACCGACATCT +
Preference number: 4 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVPQSCV*AHGPTS
Trigger: AGATGTCGGTCCATGAGCGCACACACAAGACTGAGG...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGTATGGGTCCATCACTaGTCTTTCTGTAGACTCTCC +
Preference number: 4 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMVWVHH*SFCRLS
Trigger: GGAGAGTCTACAGAAAGAGCAGTGATGGACCCATAC...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS-3UTR CCA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGACACCCAGGCAAGAATaGGGGAGGGCCTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKTPRQE*GRACGT
Trigger: TGTTCCACAGGCCCTCCCCCATTCTTGCCTGGGTGT...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCAAGAGACACAGAGGAGTaGCACACAGAGACCACCTCC +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPRDTEE*HTETTS
Trigger: GGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCT...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGCTCTGGGCTTGGCTGTaGCCCCTGGAAATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: ESQLGAGDRRQLKGTKRELWAWL*PLEMKS
Trigger: GGACTTCATTTCCAGGGGCCACAGCCAAGCCCAGAG...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATACTCTGGGCTTGGCTGTaGCCCCTGGAAATGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SASAFLLALHARALQGRILWAWL*PLEMKS
Trigger: GGACTTCATTTCCAGGGGCCACAGCCAAGCCCAGAG...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACTGGCACAGAAGATACTaGGTGGGGCAGTTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VRMWEPWHRRYWVGQFSNWHRRY*VGQFSN
Trigger: GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCA...GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GGCTCCCTGGGTGTGGTTTTAAGCATTGGTAGGCCCTGTATCATGGGTGCTGGGCATGGAGTGCGAATGTaGGAACCATGGCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: GSLGVVLSIGRPCIMGAGHGVRM*EPWHRR
Trigger: TCTTCTGTGCCATGGTTCCCACATTCGCACTCCATG...CCCAGCACCCATGATACAGGGCCTACCAATGCTTAAAACCACACCCAGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCATGTGTTGACACCACCTaGGAGGGCCGACAGTCCCTC +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGACVDTT*EGRQSL
Trigger: GAGGGACTGTCGGCCCTCCCAGGTGGTGTCAACACA...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGCACAAATACAGGCCTTaGGCACAAGATACCCAATGT +
Preference number: 4 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWHKYRP*AQDTQC
Trigger: ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTG...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCACTGGGCCACTGTGCCTaGCCCCAACATCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGALGHCA*PQHLHF
Trigger: GAAGTGGAGATGTTGGGGCCAGGCACAGTGGCCCAG...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTCTGGTCTTGAATTCCTaGGCTCAAGCCATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVLVLNS*AQAICL
Trigger: CAGGCAGATGGCTTGAGCCCAGGAATTCAAGACCAG...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCACTCCATGAACCAAGCTaGAGTGCAGTGGTGCGATCA +
Preference number: 4 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPLHEPS*SAVVRS
Trigger: TGATCGCACCACTGCACTCCAGCTTGGTTCATGGAG...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
3UTR CAA 72 bp CCGCCCCCGGCCCGATGGTCAGTTTTATGTGTCAACTaGGACGGGCTACAGTCCCAGTTATTCAAACACTCA +
Preference number: 4 (lower is better)
Translates to: PPPARWSVLCVN*DGLQSQLFKHS
Trigger: TGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAACTGACCATCGGGCCGGGGGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCACCTTCAGCTGCGGGATaGGCATCTTATAACGCTGCA +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPPSAAG*ASYNAA
Trigger: TGCAGCGTTATAAGATGCTCATCCCGCAGCTGAAGG...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTTGTGTGATGTTGTGTTaGCACCACCTGGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTCVMLC*HHLGGP
Trigger: CGGCCCTCCCAGGTGGTGTCAACACAACATCACACA...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACAACCCAATGTGTTTGCTaGGTGCAACTCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTTQCVC*VQLSGA
Trigger: GGCACCACTGAGTTGCACTCAGCAAACACATTGGGT...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATAAGTCCTGTTGCTGTTaGTGCAGGAGGCCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HRVHRTLPGTCQSAVWVHKSCCC*CRRPLW
Trigger: CCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTT...ATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR GCA 90 bp AGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACGGATCGAAGTCCTGTTaGTGTTGCTGCAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: RVHRTLPGTCQSAVWVHHGSKSC*CCCRRP
Trigger: CGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCC...GTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR GCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTGCTGTCAGGCTGCACTaGGTCGGGCTTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCAVRLH*VGLGGC
Trigger: ACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGC...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGGGTGCTGGCCCCCTaGATAGACACAGAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLGVLAP*IDTESQ
Trigger: CTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCC...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGTGGGGGCCTGAGTTaGTCCCTGCTCAGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLGGGLS*SLLRPV
Trigger: CACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACC...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCACAGCTGGGCCAGCCTTaGCACAAATTGCACAACGCC +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAQLGQP*HKLHNA
Trigger: GGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCATCGCCCAGGCTGGAGTaGAATAGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPSPRLE*NSVILA
Trigger: AGCCAAGATCACACTATTGCACTCCAGCCTGGGCGA...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACATCGCCCAGGCTGGAGTaGAATAGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTSPRLE*NSVILA
Trigger: AGCCAAGATCACACTATTGCACTCCAGCCTGGGCGA...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAAATGTGTTTGCTGAGTaGAACTCAGTGGTGCCCACC +
Preference number: 4 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPNVFAE*NSVVPT
Trigger: GGTGGGCACCACTGAGTTGCACTCAGCAAACACATT...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTAATGTGTTTGCTGAGTaGAACTCAGTGGTGCCCACC +
Preference number: 4 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVNVFAE*NSVVPT
Trigger: GGTGGGCACCACTGAGTTGCACTCAGCAAACACATT...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTTGTCAAAGCGCTGTATaGGTCCATCACTGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSACQSAV*VHHCSF
Trigger: AAAAGAGCAGTGATGGACCCATACAGCGCTTTGACA...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000615911.4
CDS-3UTR CCA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTACCCAGGCATCCAGCTaGGCCAGCCTTGCCACAAAT +
Preference number: 4 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTTQASS*ASLATN
Trigger: ATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTGGGT...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACAATGATTCACCCCGGCTaGGGCCTTTTCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTMIHPG*GLFTSP
Trigger: AGGAGAAGTGAAAAGGCCCCAGCCGGGGTGAATCAT...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTCATGGAGTGCGAATGTaGGAACCATGGCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVHGVRM*EPWHRR
Trigger: TCTTCTGTGCCATGGTTCCCACATTCGCACTCCATG...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTAGGGGAGGAATTTCCTaGGACACACAGCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGRGGIS*DTQLAI
Trigger: AATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAATTTTATGTGTCAACTTaGACGGGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQFYVST*TGYSPS
Trigger: ACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAA...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGACATCTCCACCACTGCTaGTGGGCTCTGTTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SAFLLALHARALQGRIRGHLHHC*WALLGK
Trigger: TTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATG...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCATTGTGTGTGCGCTCATaGACCGACATCTCCACCACT +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPLCVRS*TDISTT
Trigger: AGTGGTGGAGATGTCGGTCCATGAGCGCACACACAA...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCAGTAGGCCCTGTATCATaGGTGCTGGGCTATCAGGCC +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAVGPVS*VLGYQA
Trigger: GGCCTGATAGCCCAGCACCCATGATACAGGGCCTAC...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTACGGGTGTCTTGCCCGTaGCCTTGTTGGCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLRVSCP*PCWHSP
Trigger: TGGACTGTGCCAACAAGGTCACGGGCAAGACACCCG...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTTCACACCCCAACATCTaGGCCTGGGCTGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCSHPNI*AWAGSS
Trigger: GGAGCTACCAGCCCAGGCTCAGATGTTGGGGTGTGA...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR TCA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGTGTTGGGTGGGACTATaGCTATGTTATCGTACTTAT +
Preference number: 4 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWCWVGL*LCYRTY
Trigger: ATAAGTACGATAACATAGTCATAGTCCCACCCAACA...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAACCCAATGTGTTTGCTaGGTGCAACTCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SASAFLLALHARALQGRITQCVC*VQLSGA
Trigger: GGCACCACTGAGTTGCACTCAGCAAACACATTGGGT...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAAATTAGCCAGGCATCTGGTAGTCCAGCCTGGGTaGCAGAGGGAGACCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LSKRCMGPSLLFKLARHLVVQPG*QRETCP
Trigger: TGGACAGGTCTCCCTCTGTCACCCAGGCTGGACTAC...CAGATGCCTGGCTAATTTAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR GCA 90 bp AGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAGCCGCTGAAGCTTGCTaGTGGGATGCAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RTLPGTCQSAVWVHHCSLAAEAC*WDAAIF
Trigger: GAAGATGGCTGCATCCCAGCAGCAAGCTTCAGCGGC...TAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGAGGGCCAGCAGGTGGTaGGGGTGTCTTGCCCGTGAC +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMRASRW*GCLARD
Trigger: GTCACGGGCAAGACACCCGCACCACCTGCTGGCCCT...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGGCTCTTCATTCCCTTTaGACACCACCCACCAACCAC +
Preference number: 4 (lower is better)
Translates to: ESQLGAGDRRQLKGTKREALHSL*TPPTNH
Trigger: GTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGC...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGCCTTCTTGCCCTACATaGTCGGGCACTTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKPSCPT*SGTSRK
Trigger: CTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGG...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATATCGCCCAGGCTGGAGTaGAATAGTGTGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: SASAFLLALHARALQGRISPRLE*NSVILA
Trigger: AGCCAAGATCACACTATTGCACTCCAGCCTGGGCGA...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGTTGTCTTCAGTTGTATaGAAGATAACTGCATCATGT +
Preference number: 4 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPLSSVV*KITASC
Trigger: ACATGATGCAGTTATCTTGCATACAACTGAAGACAA...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCACCCACCTCCGCCCTGTaGCTGATAGATGTGTATCCA +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAPTSAL*LIDVYP
Trigger: TGGATACACATCTATCAGGCACAGGGCGGAGGTGGG...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCAACGTTGGAGAGTGCTTaGCACTGTCACAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPTLESA*HCHNSV
Trigger: CACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGT...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGGCACTGCGTCGGGCTTaGTGGCTGTGGGCACCAACG +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMALRRA*WLWAPT
Trigger: CGTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGC...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTTTTTATGTGTCAACTTaGACGGGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: ASSWASLATNCTTPLTQVFYVST*TGYSPS
Trigger: ACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAA...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGATTTTATGTGTCAACTTaGACGGGCTACAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RDSASAFLLALHARALQGFYVST*TGYSPS
Trigger: ACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAA...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATACTCCATGAACCAAGCTaGAGTGCAGTGGTGCGATCA +
Preference number: 4 (lower is better)
Translates to: SASAFLLALHARALQGRILHEPS*SAVVRS
Trigger: TGATCGCACCACTGCACTCCAGCTTGGTTCATGGAG...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTTGTCAAAGCGCTGTATaGGTCCATCACTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVCQSAV*VHHCSF
Trigger: GAAAGAGCAGTGATGGACCCATACAGCGCTTTGACA...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS-3UTR CCA 90 bp GAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGTAGTCCTGGCTACTTaGGAGGCTGAGGCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: ECIELFQALVKALYGSITVVLAT*EAEARG
Trigger: TCCTCTTGCCTCAGCCTCCCAAGTAGCCAGGACTAC...AGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR TCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCACCTTCAGCTGCGGGATaGGCATCTTATAACGCTGCA +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAPSAAG*ASYNAA
Trigger: TGCAGCGTTATAAGATGCTCATCCCGCAGCTGAAGG...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp AGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACCCTTCAGCTGCGGGATaGGCATCTTATAACGCTGCA +
Preference number: 4 (lower is better)
Translates to: RVHRTLPGTCQSAVWVHHPSAAG*ASYNAA
Trigger: TGCAGCGTTATAAGATGCTCATCCCGCAGCTGAAGG...GTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR TCA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGAAAAAGAGACAGGATaGGAGAGACACAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: QASSWASLATNCTTPLTQEKETG*ERHNCN
Trigger: ATTACAGTTGTGTCTCTCTCATCCTGTCTCTTTTTC...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp GGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGAAAAAGAGACAGGATaGGAGAGACACAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: GTHSWPFPSFPVWGLGLSEKETG*ERHNCN
Trigger: ATTACAGTTGTGTCTCTCTCATCCTGTCTCTTTTTC...GCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp CCATTTCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATAAATGGGCAAAACTaGGGCTCCCCTGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PFPSFPVWGLGLSVNHRGINGQN*GSPEGE
Trigger: TTCTCCTTCAGGGGAGCCTCAGTTTTGCCCATTTAT...ACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGAAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGTGTTGGGTGGGACTATaGCTATGTTATCGTACTTAT +
Preference number: 4 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMCWVGL*LCYRTY
Trigger: ATAAGTACGATAACATAGTCATAGTCCCACCCAACA...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTAAGTCCTGTTGCTGTTaGTGCAGGAGGCCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCKSCCC*CRRPLW
Trigger: CCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTT...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTATGGGCTCAAGCCATCTaGCTGCCTGCACCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLWAQAI*LPAPPK
Trigger: TTTGGGAGGTGCAGGCAGGCAGATGGCTTGAGCCCA...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp GGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGGTGTCAAAGCGCTGTATaGGTCCATCACTGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: GGISWDTQLAISQFSSVGCQSAV*VHHCSF
Trigger: AAAAGAGCAGTGATGGACCCATACAGCGCTTTGACA...CCCCACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGGACCGCCAGGTACTGTaGGTAGGGGAGGCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMDRQVL*VGEAVR
Trigger: CCTGACAGCCTCCCCTACCCACAGTACCTGGCGGTC...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGACGGTGTGAATGTCCTTaGCACAGGAAATCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SAFLLALHARALQGRIRGRCECP*HRKSGL
Trigger: AAGCCCAGATTTCCTGTGCCAAGGACATTCACACCG...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAACACCCAGGCAAGAATaGGGGAGGGCCTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLTPRQE*GRACGT
Trigger: TGTTCCACAGGCCCTCCCCCATTCTTGCCTGGGTGT...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCAACAGAAGATACTGGGTaGGGCAGTTCTCCAACCAGG +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGATEDTG*GSSPTR
Trigger: CCTGGTTGGAGAACTGCCCCACCCAGTATCTTCTGT...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp GTCACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCCGAATGTGGGAACCATaGCACAGAAGATACTGGGTG +
Preference number: 4 (lower is better)
Translates to: VTECIELFQALVKALYGSRMWEP*HRRYWV
Trigger: CACCCAGTATCTTCTGTGCCATGGTTCCCACATTCG...GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS-3UTR CCA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGATTCAATTAGATAAATaGGCAAAACTGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGIQLDK*AKLRLP
Trigger: GGGGAGCCTCAGTTTTGCCCATTTATCTAATTGAAT...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp GTTTTATGTGTCAACTTGGACGGGCTACAGTCCCAGTTATTCAAACACTCATCTTCACACCCCAACATCTaGGCCTGGGCTGGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: VLCVNLDGLQSQLFKHSSSHPNI*AWAGSS
Trigger: GGAGCTACCAGCCCAGGCTCAGATGTTGGGGTGTGA...AGATGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGATAAATGGGCAAAACTaGGGCTCCCCTGAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ESQLGAGDRRQLKGTKREINGQN*GSPEGE
Trigger: TTCTCCTTCAGGGGAGCCTCAGTTTTGCCCATTTAT...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCAAAAACAGGGTCTCCATaGACCAAGCTGGAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAKTGSP*TKLECS
Trigger: ACTGCACTCCAGCTTGGTTCATGGAGACCCTGTTTT...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp ACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TECIELFQALVKALYGSIQLVTE*IELFQA
Trigger: TGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTG...GATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGCGACATCTCCACCACTaGTGGTGGGCTCTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMRHLHH*WWALLG
Trigger: CCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCG...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAAATGAGCCAAGATCGTaGCACTGTAGTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RTLPGTCQSAVWVHHCSLNEPRS*HCSPAW
Trigger: CCAGGCTGGACTACAGTGGCACGATCTTGGCTCATT...TAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR CCA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGTGTCAAAGCGCTGTATaGGTCCATCACTGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RGGISWDTQLAISQFSSVCQSAV*VHHCSF
Trigger: AAAAGAGCAGTGATGGACCCATACAGCGCTTTGACA...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCACGGTGTGAATGTCCTTaGCACAGGAAATCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGARCECP*HRKSGL
Trigger: AAGCCCAGATTTCCTGTGCCAAGGACATTCACACCG...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAAGAGACACAGAGGAGTaGCACACAGAGACCACCTCC +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLRDTEE*HTETTS
Trigger: GGAGGTGGTCTCTGTGTGCCACTCCTCTGTGTCTCT...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCACACAAATACAGGCCTTaGGCACAAGATACCCAATGT +
Preference number: 4 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPHKYRP*AQDTQC
Trigger: ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTG...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR TCA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGTCGATGTTAGTGTTCTaGATCAAGTTTTGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKSMLVF*IKFWAA
Trigger: TGCGGCCCAAAACTTGATTCAGAACACTAACATCGA...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp GTTTTATGTGTCAACTTGGACGGGCTACAGTCCCAGTTATTCAAACACTCATCTGAAGCCGCTGAAGCTTaGTGCTGGGATGCAGCCATC +
Preference number: 4 (lower is better)
Translates to: VLCVNLDGLQSQLFKHSSEAAEA*CWDAAI
Trigger: GATGGCTGCATCCCAGCAGCAAGCTTCAGCGGCTTC...AGATGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGAGCCTTGCCACAAATTaGACAACGCCCCTCACTCAA +
Preference number: 4 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWSLATN*TTPLTQ
Trigger: TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCT...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTTTGTCTTCAGTTGTATaGAAGATAACTGCATCATGT +
Preference number: 4 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSALSSVV*KITASC
Trigger: ACATGATGCAGTTATCTTGCATACAACTGAAGACAA...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCATGCGTCTCTCCCCGTTaGTTTTCAGCATCCCTATTT +
Preference number: 4 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGACVSPR*FSASLF
Trigger: AAATAGGGATGCTGAAAAGCAACGGGGAGAGACGCA...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAATGATTCACCCCGGCTaGGGCCTTTTCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLMIHPG*GLFTSP
Trigger: AGGAGAAGTGAAAAGGCCCCAGCCGGGGTGAATCAT...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGCCGCCCCCGGCCCGATaGTCAGTTTTATGTGTCAAC +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMPPPAR*SVLCVN
Trigger: GTTGACACATAAAACTGACCATCGGGCCGGGGGCGG...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAAGCCTTGCCACAAATTaGACAACGCCCCTCACTCAA +
Preference number: 4 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLSLATN*TTPLTQ
Trigger: TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCT...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAGAAAAAGAGACAGGATaGGAGAGACACAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: SASAFLLALHARALQGRIEKETG*ERHNCN
Trigger: ATTACAGTTGTGTCTCTCTCATCCTGTCTCTTTTTC...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGGCTCTTCATTCCCTTTaGACACCACCCACCAACCAC +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMALHSL*TPPTNH
Trigger: GTGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGC...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR GCA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTACACGATTCTCCATATaGAGATGTTACATTTCATGT +
Preference number: 4 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVTRFSI*RCYISC
Trigger: ACATGAAATGTAACATCTGCATATGGAGAATCGTGT...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGGAAGTGCGTTACGACTaGGTCTCTCCCCGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMEVRYD*VSPRCF
Trigger: AAAGCAACGGGGAGAGACGCAGTCGTAACGCACTTC...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGTTGGCACAGGAAATCTaGGCTTTGATGACCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMLAQEI*ALMTAR
Trigger: CCTGGCGGTCATCAAAGCCCAGATTTCCTGTGCCAA...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp AGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAATTCAATTAGATAAATaGGCAAAACTGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SASAFLLALHARALQGRIIQLDK*AKLRLP
Trigger: GGGGAGCCTCAGTTTTGCCCATTTATCTAATTGAAT...TATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CCA 90 bp TCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAAATTAGCCTGTCAAAGCGCTGTATaGGTCCATCACTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: SRHLSKRCMGPSLLFKLACQSAV*VHHCSL
Trigger: TAAAGAGCAGTGATGGACCCATACAGCGCTTTGACA...GGCTAATTTAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
3UTR CAA 72 bp TCTCTCACTAGAACATCAGCTCCACAAATACAGGCCTaGGGCACAAGATACCCAATGTGTTTGCTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLTRTSAPQIQA*GTRYPMCLLSA
Trigger: TGCACTCAGCAAACACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMQLVTE*IELFQA
Trigger: TGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTG...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR TCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTGAAAAAGAGACAGGATaGGAGAGACACAACTGTAAT +
Preference number: 4 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCEKETG*ERHNCN
Trigger: ATTACAGTTGTGTCTCTCTCATCCTGTCTCTTTTTC...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTATAAACCATAATGAATaGTCACGAAACCACAATCCA +
Preference number: 4 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTINHNE*SRNHNP
Trigger: TGGATTGTGGTTTCGTGAGCATTCATTATGGTTTAT...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315588.11
CDS-3UTR GCA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTACACGATTCTCCATATaGAGATGTTACATTTCATGT +
Preference number: 4 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCTRFSI*RCYISC
Trigger: ACATGAAATGTAACATCTGCATATGGAGAATCGTGT...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR GCA 90 bp GTTTTATGTGTCAACTTGGACGGGCTACAGTCCCAGTTATTCAAACACTCATCTTTGTCTTCAGTTGTATaGAAGATAACTGCATCATGT +
Preference number: 4 (lower is better)
Translates to: VLCVNLDGLQSQLFKHSSLSSVV*KITASC
Trigger: ACATGATGCAGTTATCTTGCATACAACTGAAGACAA...AGATGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
3UTR CAA 72 bp GTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGTaGGGTGGGACTATGACTATGTTATCGTACTTATTT +
Preference number: 4 (lower is better)
Translates to: VVFSCMQDNCIM*GGTMTMLSYLF
Trigger: AAATAAGTACGATAACATAGTCATAGTCCCACCCAACATGATGCAGTTATCTTGCATACAACTGAAGACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS GCA 90 bp CCGCTCTGGGCAGGGCCCACCAGTTGTGCTGGCGGTTGCGGCTGCTaGTGGGGACCCGGGCCGCCAGCCGAACTAGGACCCGATACACCA +
Preference number: 5 (lower is better)
Translates to: PLWAGPTSCAGGCGC*WGPGPPAELGPDTP
Trigger: TGGTGTATCGGGTCCTAGTTCGGCTGGCGGCCCGGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCTGCCCAGAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000599417.2
ENST00000600973.5
ENST00000615911.4
CDS CCA 90 bp CTCTGGGCAGGGCCCACCAGTTGTGCTGGCGGTTGCGGCTGCTGCTaGGGACCCGGGCCGCCAGCCGAACTAGGACCCGATACACCAGCA +
Preference number: 5 (lower is better)
Translates to: LWAGPTSCAGGCGCC*GPGPPAELGPDTPA
Trigger: TGCTGGTGTATCGGGTCCTAGTTCGGCTGGCGGCCCGGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCTGCCCAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000599417.2
ENST00000600973.5
ENST00000615911.4
CDS CCA 90 bp TGCACAGGATCGAAGTCCTGTTGCTGTTGCTGCAGGAGGCCGCTCTaGGCAGGGCCCACCAGTTGTGCTGGCGGTTGCGGCTGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: CTGSKSCCCCCRRPL*AGPTSCAGGCGCCW
Trigger: CCAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCCTGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000599417.2
ENST00000600973.5
ENST00000615911.4
CDS-3UTR CAA 90 bp GTAGGGGAGGCTGTCAGGCTGCACTGCGTCGGGCTTGGTGGCTGTGGGCACCAATTGCCCGTGACCTTGTaGGCACAGTCCAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: VGEAVRLHCVGLGGCGHQLPVTL*AQSSRA
Trigger: CGCCCTGCTGGACTGTGCCAACAAGGTCACGGGCAA...TTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCAGCCTGACAGCCTCCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS-3UTR CAA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGCCTGCGAGCTCCCTGTaGGCCTCTGCTGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWPASSL*ASAAPC
Trigger: GCAGGGGGCAGCAGAGGCCAACAGGGAGCTCGCAGG...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGGGGTGGGGGCCTGAGTaGCTCCCTGCTCAGACCTGT +
Preference number: 5 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEGWGPE*LPAQTC
Trigger: ACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACCC...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAACCTGCGAGCTCCCTGTaGGCCTCTGCTGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: QASSWASLATNCTTPLTQPASSL*ASAAPC
Trigger: GCAGGGGGCAGCAGAGGCCAACAGGGAGCTCGCAGG...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS CCA 90 bp CTGCGTCGGGCTTGGTGGCTGTGGGCACCAACGTTGGAGAGTGCTTaGCACTGTCACAACTCTGTGACAGGCACTCATGCGCCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: LRRAWWLWAPTLESA*HCHNSVTGTHAPGA
Trigger: GGCGCCTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAGCCACCAAGCCCGACGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596297.1
CDS-3UTR CAA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGGTCTTGCCCGTGACCTaGTTGGCACAGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEVLPVT*LAQSSR
Trigger: CCTGCTGGACTGTGCCAACAAGGTCACGGGCAAGAC...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCTGCACTGCGTCGGGCTaGGTGGCAGGCACAGCTCCA +
Preference number: 5 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPCTASG*VAGTAP
Trigger: TGGAGCTGTGCCTGCCACCAAGCCCGACGCAGTGCA...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000594368.5
CDS-3UTR CAA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGGACAGTCCCTCAGTCTaGTGTGTGCGCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPDSPSV*CVRSWT
Trigger: GGTCCATGAGCGCACACACAAGACTGAGGGACTGTC...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CTCCACTGCTCCTCTCCTAGGCCAAGGACCCTGGGGTCTGGGCTGACATGCGAGGACAGTCCCTCAGTCTaGTGTGTGCGCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: LHCSSPRPRTLGSGLTCEDSPSV*CVRSWT
Trigger: GGTCCATGAGCGCACACACAAGACTGAGGGACTGTC...CTCGCATGTCAGCCCAGACCCCAGGGTCCTTGGCCTAGGAGAGGAGCAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGTTGCCCGTGACCTTGTaGGCACAGTCCAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGLPVTL*AQSSRA
Trigger: CGCCCTGCTGGACTGTGCCAACAAGGTCACGGGCAA...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCACCACTGCTGGGGTGGTGCGGGTGTCTaGCCCGTGACCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: QSLSLVCALMDRHLHHCWGGAGV*PVTLLA
Trigger: TGCCAACAAGGTCACGGGCAAGACACCCGCACCACC...CCAGCAGTGGTGGAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGGAAGTCCTGTTGCTGTaGCTGCAGGAGGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGEVLLL*LQEAAL
Trigger: CAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTC...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTTGCACTGCGTCGGGCTaGGTGGCTGTGGGCACCAAC +
Preference number: 5 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVCTASG*VAVGTN
Trigger: GTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCA...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGGTGGTGCGGGTGTCTaGCCCGTGACCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLGGAGV*PVTLLA
Trigger: TGCCAACAAGGTCACGGGCAAGACACCCGCACCACC...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTGGTGGTGCGGGTGTCTaGCCCGTGACCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: ASSWASLATNCTTPLTQVGGAGV*PVTLLA
Trigger: TGCCAACAAGGTCACGGGCAAGACACCCGCACCACC...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGCCTGCGAGCTCCCTGTaGGCCTCTGCTGCCCCCTGC +
Preference number: 5 (lower is better)
Translates to: ESQLGAGDRRQLKGTKREPASSL*ASAAPC
Trigger: GCAGGGGGCAGCAGAGGCCAACAGGGAGCTCGCAGG...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGCCAGCTGGGCCAGCCTaGCCACAAATTGCACAACGC +
Preference number: 5 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGPAGPA*PQIAQR
Trigger: GCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGG...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGCTGCGTCTCTCCCCGTaGCTTTTCAGCATCCCTATT +
Preference number: 5 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPLRLSP*LFSIPI
Trigger: AATAGGGATGCTGAAAAGCAACGGGGAGAGACGCAG...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS GCA 90 bp CTGCGTCGGGCTTGGTGGCAGGCACAGCTCCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCC +
Preference number: 5 (lower is better)
Translates to: LRRAWWQAQLQLVTE*IELFQALVKALYGS
Trigger: GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTGGAGCTGTGCCTGCCACCAAGCCCGACGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594368.5
CDS-3UTR CAA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTGAAGTCCTGTTGCTGTaGCTGCAGGAGGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: ASSWASLATNCTTPLTQVEVLLL*LQEAAL
Trigger: CAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTC...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGAACTCTTCCAGGCACTaGTCAAAGCGCTGTATGGGT +
Preference number: 5 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPNSSRH*SKRCMG
Trigger: ACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTT...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGGTGCTGGCCCCCCAGCCTTGCCACAAATaGCACAACGCCCCTCACTCA +
Preference number: 5 (lower is better)
Translates to: LEMKSLPLAPDNPGVLAPQPCHK*HNAPHS
Trigger: TGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTG...GGGGGCCAGCACCCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGGTGTGTGATGTTGTGTaGACACCACCTGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGVCDVV*TPPGRA
Trigger: GGCCCTCCCAGGTGGTGTCAACACAACATCACACAC...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS GCA 90 bp TTGCTGCTGGGATGCAGCCATCTTCCTCGCGTAGACCGCCGGAAGTaGGTTACGACTGCGTCTCTCCCCGTTGCTTTTCAGCATCCCTAT +
Preference number: 5 (lower is better)
Translates to: LLLGCSHLPRVDRRK*VTTASLPVAFQHPY
Trigger: ATAGGGATGCTGAAAAGCAACGGGGAGAGACGCAGTCGTAACGCACTTCCGGCGGTCTACGCGAGGAAGATGGCTGCATCCCAGCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GTCACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCTGCACTGCGTCGGGCTaGGTGGCTGTGGGCACCAAC +
Preference number: 5 (lower is better)
Translates to: VTECIELFQALVKALYGSCTASG*VAVGTN
Trigger: GTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCA...GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS-3UTR CAA 90 bp TGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCCAGGAAATCTGGGCTTaGATGACCGCCAGGTACTGT +
Preference number: 5 (lower is better)
Translates to: WEGRQSLSLVCALMDRHLQEIWA*MTARYC
Trigger: ACAGTACCTGGCGGTCATCAAAGCCCAGATTTCCTG...GAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATTGCCCGTGACCTTGTaGGCACAGTCCAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPLPVTL*AQSSRA
Trigger: CGCCCTGCTGGACTGTGCCAACAAGGTCACGGGCAA...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTGTCTTGCCCGTGACCTaGTTGGCACAGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVVLPVT*LAQSSR
Trigger: CCTGCTGGACTGTGCCAACAAGGTCACGGGCAAGAC...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGCGCTCTTCATTCCCTTaGCACACCACCCACCAACCA +
Preference number: 5 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMRSSFP*HTTHQP
Trigger: TGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCG...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CAGGCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAACCAGGCTGAGTCACTaGAGGCTTTCACACCCCAAC +
Preference number: 5 (lower is better)
Translates to: QASSWASLATNCTTPLTQTRLSH*RLSHPN
Trigger: GTTGGGGTGTGAAAGCCTCAAGTGACTCAGCCTGGT...TTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS GCA 90 bp ATGCAGCCATCTTCCTCGCGTAGACCGCCGGAAGTGCGTTACGACTaGGTCTCTCCCCGTTGCTTTTCAGCATCCCTATTTCTAGTCCCC +
Preference number: 5 (lower is better)
Translates to: MQPSSSRRPPEVRYD*VSPRCFSASLFLVP
Trigger: GGGGACTAGAAATAGGGATGCTGAAAAGCAACGGGGAGAGACGCAGTCGTAACGCACTTCCGGCGGTCTACGCGAGGAAGATGGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACAGAAGTCCTGTTGCTGTaGCTGCAGGAGGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTEVLLL*LQEAAL
Trigger: CAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTC...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp ATCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGCAGGAAATCTGGGCTTaGATGACCGCCAGGTACTGT +
Preference number: 5 (lower is better)
Translates to: IHGPRVSLQTWGPGQEAMQEIWA*MTARYC
Trigger: ACAGTACCTGGCGGTCATCAAAGCCCAGATTTCCTG...CATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTCAGGAAATCTGGGCTTaGATGACCGCCAGGTACTGT +
Preference number: 5 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSAQEIWA*MTARYC
Trigger: ACAGTACCTGGCGGTCATCAAAGCCCAGATTTCCTG...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCAGTCTTGCCCGTGACCTaGTTGGCACAGTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPVLPVT*LAQSSR
Trigger: CCTGCTGGACTGTGCCAACAAGGTCACGGGCAAGAC...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GCATCCAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCGCTCTTCATTCCCTTaGCACACCACCCACCAACCA +
Preference number: 5 (lower is better)
Translates to: ASSWASLATNCTTPLTQVRSSFP*HTTHQP
Trigger: TGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCG...AACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCAGGGTGGGGGCCTGAGTaGCTCCCTGCTCAGACCTGT +
Preference number: 5 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAGWGPE*LPAQTC
Trigger: ACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACCC...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CTCATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTACAGCCTTGCCACAAATaGCACAACGCCCCTCACTCA +
Preference number: 5 (lower is better)
Translates to: LMDRHLHHCWWALLGKGLQPCHK*HNAPHS
Trigger: TGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTG...TAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGCCAGCTGGGCCAGCCTaGCCACAAATTGCACAACGC +
Preference number: 5 (lower is better)
Translates to: RGGISWDTQLAISQFSSVPAGPA*PQIAQR
Trigger: GCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGG...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAACCAGGCTGAGTCACTaGAGGCTTTCACACCCCAAC +
Preference number: 5 (lower is better)
Translates to: RDSASAFLLALHARALQGTRLSH*RLSHPN
Trigger: GTTGGGGTGTGAAAGCCTCAAGTGACTCAGCCTGGT...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGGGGAGGAATTTCCTGGGACACACAGCTGGCCATTTCCCAGTTTTCCAGTGTGGGTCCTAGGGTTTCCTaGCAGACGTGGGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RGGISWDTQLAISQFSSVGPRVS*QTWGPG
Trigger: TCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACC...CACACTGGAAAACTGGGAAATGGCCAGCTGTGTGTCCCAGGAAATTCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TCCATGGTCCTAGGGTTTCCTTGCAGACGTGGGGTCCAGGACAGGAGGCCATGGTGCAATAGTGTGATCTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: SMVLGFPCRRGVQDRRPWCNSVI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATCACACTATTGCA...CCATGGCCTCCTGTCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACCATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CACCACCTGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGGATAACTGCATCATGTaGGGTGGGACTATGACTATG +
Preference number: 5 (lower is better)
Translates to: HHLGGPTVPQSCVCAHGPDNCIM*GGTMTM
Trigger: CATAGTCATAGTCCCACCCAACATGATGCAGTTATC...CGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCAGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAGTGTGTGATGTTGTGTaGACACCACCTGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPVCDVV*TPPGRA
Trigger: GGCCCTCCCAGGTGGTGTCAACACAACATCACACAC...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGGGACAGCGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGATTGCTCGGACTGGTCTaGAATTCCTGGGCTCAAGCC +
Preference number: 5 (lower is better)
Translates to: RDSASAFLLALHARALQGLLGLV*NSWAQA
Trigger: GGCTTGAGCCCAGGAATTCAAGACCAGTCCGAGCAA...TCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCGCTGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CAA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGAGAAGTCCTGTTGCTGTaGCTGCAGGAGGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: SAFLLALHARALQGRIRGEVLLL*LQEAAL
Trigger: CAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTC...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGAACTCTTCCAGGCACTaGTCAAAGCGCTGTATGGGT +
Preference number: 5 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGNSSRH*SKRCMG
Trigger: ACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTT...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TGGCTGTGGCCCCTGGAAATGAAGTCCCTTCCCTTAGCCCCAGATAACCCAGGGAACTCTTCCAGGCACTaGTCAAAGCGCTGTATGGGT +
Preference number: 5 (lower is better)
Translates to: WLWPLEMKSLPLAPDNPGNSSRH*SKRCMG
Trigger: ACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTT...CCCTGGGTTATCTGGGGCTAAGGGAAGGGACTTCATTTCCAGGGGCCACAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCAGGTGGTGCGGGTGTCTaGCCCGTGACCTTGTTGGCA +
Preference number: 5 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAGGAGV*PVTLLA
Trigger: TGCCAACAAGGTCACGGGCAAGACACCCGCACCACC...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCAACCGCTCTTCATTCCCTTaGCACACCACCCACCAACCA +
Preference number: 5 (lower is better)
Translates to: VRMWEPWHRRYWVGQFSNRSSFP*HTTHQP
Trigger: TGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCG...GTTGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGGGGTGGGGGCCTGAGTaGCTCCCTGCTCAGACCTGT +
Preference number: 5 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWGWGPE*LPAQTC
Trigger: ACAGGTCTGAGCAGGGAGCAACTCAGGCCCCCACCC...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACCAGCCTTGCCACAAATaGCACAACGCCCCTCACTCA +
Preference number: 5 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYQPCHK*HNAPHS
Trigger: TGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTG...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTCAGCCTTGCCACAAATaGCACAACGCCCCTCACTCA +
Preference number: 5 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVQPCHK*HNAPHS
Trigger: TGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTG...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCATGGTCCTAGGGTTACCAGGCTGAGTCACTaGAGGCTTTCACACCCCAAC +
Preference number: 5 (lower is better)
Translates to: VWGLGLSVNHRGIHGPRVTRLSH*RLSHPN
Trigger: GTTGGGGTGTGAAAGCCTCAAGTGACTCAGCCTGGT...AACCCTAGGACCATGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GTCACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCGGTCCTAGGGTTTCCTaGCAGACGTGGGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: VTECIELFQALVKALYGSGPRVS*QTWGPG
Trigger: TCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACC...GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS GCA 90 bp GTCCAGAAGGCTTCTTACCAGGCACAGCTCCAGCTGGTCACAGAGTaGATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCC +
Preference number: 5 (lower is better)
Translates to: VQKASYQAQLQLVTE*IELFQALVKALYGS
Trigger: GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGACCAGCTGGAGCTGTGCCTGGTAAGAAGCCTTCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596297.1
CDS-3UTR CAA 90 bp AACCCAGGGGTGCTGGCCCCCTGCATAGACACAGAGTCCCAGTTAGGAGCTGGGTCCATCACTGCTCTTTaGTCCATTGTCGATGTTAGT +
Preference number: 5 (lower is better)
Translates to: NPGVLAPCIDTESQLGAGSITAL*SIVDVS
Trigger: ACTAACATCGACAATGGACAAAAGAGCAGTGATGGA...CCCAGCTCCTAACTGGGACTCTGTGTCTATGCAGGGGGCCAGCACCCCTGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000615911.4
CDS-3UTR CAA 90 bp TCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGGGGACTGTGGGCACCAACGTaGGAGAGTGCTTGGCACTGT +
Preference number: 5 (lower is better)
Translates to: SAFLLALHARALQGRIRGLWAPT*ESAWHC
Trigger: ACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAG...TCCCCTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGCTGTGGGCACCAACGTaGGAGAGTGCTTGGCACTGT +
Preference number: 5 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKLWAPT*ESAWHC
Trigger: ACAGTGCCAAGCACTCTCCAACGTTGGTGCCCACAG...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CCTGTGGAACAGAGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTATGCACTGCGTCGGGCTaGGTGGCTGTGGGCACCAAC +
Preference number: 5 (lower is better)
Translates to: PVEQRSHQHTQFKVYPRLCTASG*VAVGTN
Trigger: GTTGGTGCCCACAGCCACCAAGCCCGACGCAGTGCA...TAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCTCTGTTCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TCCAGGACAGGAGGCCATGGAGTGCGAATGTGGGAACCATGGCACAGAAGATACCAGGAAATCTGGGCTTaGATGACCGCCAGGTACTGT +
Preference number: 5 (lower is better)
Translates to: SRTGGHGVRMWEPWHRRYQEIWA*MTARYC
Trigger: ACAGTACCTGGCGGTCATCAAAGCCCAGATTTCCTG...GTATCTTCTGTGCCATGGTTCCCACATTCGCACTCCATGGCCTCCTGTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTCCAGCTGGGCCAGCCTaGCCACAAATTGCACAACGC +
Preference number: 5 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTPAGPA*PQIAQR
Trigger: GCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGG...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGCTTCAGCCTTCCTTCTaGCCCTACATGCTCGGGCAC +
Preference number: 5 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKLQPSF*PYMLGH
Trigger: GTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAG...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TGGGAGGGCCGACAGTCCCTCAGTCTTGTGTGTGCGCTCATGGACCGACATCTCGATAACTGCATCATGTaGGGTGGGACTATGACTATG +
Preference number: 5 (lower is better)
Translates to: WEGRQSLSLVCALMDRHLDNCIM*GGTMTM
Trigger: CATAGTCATAGTCCCACCCAACATGATGCAGTTATC...GAGATGTCGGTCCATGAGCGCACACACAAGACTGAGGGACTGTCGGCCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTAAGAGAGAGGACAGTCCCTCAGTCTaGTGTGTGCGCTCATGGACC +
Preference number: 5 (lower is better)
Translates to: ESQLGAGDRRQLKGTKREDSPSV*CVRSWT
Trigger: GGTCCATGAGCGCACACACAAGACTGAGGGACTGTC...CTCTCTCTTAGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTGCTCTTTAGAAGTCCTGTTGCTGTaGCTGCAGGAGGCCGCTCTG +
Preference number: 5 (lower is better)
Translates to: RTLPGTCQSAVWVHHCSLEVLLL*LQEAAL
Trigger: CAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTC...TAAAGAGCAGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR CAA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGGGTCCTAGGGTTTCCTaGCAGACGTGGGGTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWGPRVS*QTWGPG
Trigger: TCCTGGACCCCACGTCTGCAAGGAAACCCTAGGACC...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp ATAGACACAGAGTCCCAGTTAGGAGCTGGGGATAGAAGACAGCTAAAGGGGACTCTTCAGCCTTCCTTCTaGCCCTACATGCTCGGGCAC +
Preference number: 5 (lower is better)
Translates to: IDTESQLGAGDRRQLKGTLQPSF*PYMLGH
Trigger: GTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAG...AGTCCCCTTTAGCTGTCTTCTATCCCCAGCTCCTAACTGGGACTCTGTGTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GAGTGCGAATGTGGGAACCATGGCACAGAAGATACTGGGTGGGGCAGTTCTCCATGCAATAGTGTGATCTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: ECECGNHGTEDTGWGSSPCNSVI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATCACACTATTGCA...TGGAGAACTGCCCCACCCAGTATCTTCTGTGCCATGGTTCCCACATTCGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGGATAACTGCATCATGTaGGGTGGGACTATGACTATG +
Preference number: 5 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGDNCIM*GGTMTM
Trigger: CATAGTCATAGTCCCACCCAACATGATGCAGTTATC...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGGCTGCTGTGTTTAGGCCCAGGACGCTCTTCATTCCCTTTGCACACCACCCACAGATACCCAATGTGTTaGCTGAGTGCAACTCAGTGG +
Preference number: 5 (lower is better)
Translates to: RLLCLGPGRSSFPLHTTHRYPMC*LSATQW
Trigger: CCACTGAGTTGCACTCAGCAAACACATTGGGTATCT...GTGGGTGGTGTGCAAAGGGAATGAAGAGCGTCCTGGGCCTAAACACAGCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp ATGGACCGACATCTCCACCACTGCTGGTGGGCTCTGTTGGGGAAAGGGTTAGTTCCACAAATACAGGCCTaGGGCACAAGATACCCAATG +
Preference number: 5 (lower is better)
Translates to: MDRHLHHCWWALLGKGLVPQIQA*GTRYPM
Trigger: CATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGG...AACTAACCCTTTCCCCAACAGAGCCCACCAGCAGTGGTGGAGATGTCGGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CAA 90 bp GTCACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATTTCTAGTCCCCGTTaGCTAGTTAGTCCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: VTECIELFQALVKALYGSISSPR*LVSPAP
Trigger: GGGGGCGGGACTAACTAGCAAACGGGGACTAGAAAT...GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599417.2
CDS-3UTR CAA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACACTGCGTCTCTCCCCGTaGCTTTTCAGCATCCCTATT +
Preference number: 5 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTLRLSP*LFSIPI
Trigger: AATAGGGATGCTGAAAAGCAACGGGGAGAGACGCAG...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CAGCTGGGCCAGCCTTGCCACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTTCCATCACTGCTCTTTaGTCCATTGTCGATGTTAGT +
Preference number: 5 (lower is better)
Translates to: QLGQPCHKLHNAPHSSSASITAL*SIVDVS
Trigger: ACTAACATCGACAATGGACAAAAGAGCAGTGATGGA...AGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000615911.4
CDS-3UTR CAA 90 bp CACAAATTGCACAACGCCCCTCACTCAAGTTCCGCTGACGCAGGCTTGGGTGGGTCCATCACTGCTCTTTaGTCCATTGTCGATGTTAGT +
Preference number: 5 (lower is better)
Translates to: HKLHNAPHSSSADAGLGGSITAL*SIVDVS
Trigger: ACTAACATCGACAATGGACAAAAGAGCAGTGATGGA...CCCACCCAAGCCTGCGTCAGCGGAACTTGAGTGAGGGGCGTTGTGCAATTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000615911.4
CDS-3UTR CAA 90 bp AGATACTGGGTGGGGCAGTTCTCCAACCAGGCTGAGTCACTTGAGGCTTTCACAAACTCTTCCAGGCACTaGTCAAAGCGCTGTATGGGT +
Preference number: 5 (lower is better)
Translates to: RYWVGQFSNQAESLEAFTNSSRH*SKRCMG
Trigger: ACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTT...TGTGAAAGCCTCAAGTGACTCAGCCTGGTTGGAGAACTGCCCCACCCAGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTCCAGCTGGGCCAGCCTaGCCACAAATTGCACAACGC +
Preference number: 5 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCPAGPA*PQIAQR
Trigger: GCGTTGTGCAATTTGTGGCAAGGCTGGCCCAGCTGG...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CAA 90 bp TTAAGTGTGGTTAAGGAGATGTGTGAGGGTGCCCAGATGACAAGGACTAGATGGCTTCAGCCTTCCTTCTaGCCCTACATGCTCGGGCAC +
Preference number: 5 (lower is better)
Translates to: LSVVKEMCEGAQMTRTRWLQPSF*PYMLGH
Trigger: GTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAG...CCATCTAGTCCTTGTCATCTGGGCACCCTCACACATCTCCTTAACCACACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TCCCAGTTTTCCAGTGTGGGGACTTGGGCTCAGCGTGAATCACAGAGGTATCCACCACAAATACAGGCCTaGGGCACAAGATACCCAATG +
Preference number: 5 (lower is better)
Translates to: SQFSSVGTWAQRESQRYPPQIQA*GTRYPM
Trigger: CATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGG...TGGATACCTCTGTGATTCACGCTGAGCCCAAGTCCCCACACTGGAAAACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS TCA 90 bp CCGCAACCTTCATCAAGGTCTGTAGACTCTCCTTCAGCTGCGGGATaGGCATCTTATAACGCTGCACAGGATCGAAGTCCTGTTGCTGTT +
Preference number: 5 (lower is better)
Translates to: PQPSSRSVDSPSAAG*ASYNAAQDRSPVAV
Trigger: AACAGCAACAGGACTTCGATCCTGTGCAGCGTTATAAGATGCTCATCCCGCAGCTGAAGGAGAGTCTACAGACCTTGATGAAGGTTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000600973.5
ENST00000615911.4
CDS-3UTR CAA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGTTGCCCGTGACCTTGTaGGCACAGTCCAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMLPVTL*AQSSRA
Trigger: CGCCCTGCTGGACTGTGCCAACAAGGTCACGGGCAA...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp CGCTTCAGCCTTCCTTCTTGCCCTACATGCTCGGGCACTTCAAGGAAGAATAAGTGCAATAGTGTGATCTaGGCTCACTGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: RFSLPSCPTCSGTSRKNKCNSVI*AHCNLC
Trigger: GCAGAGGTTGCAGTGAGCCAAGATCACACTATTGCA...CTTATTCTTCCTTGAAGTGCCCGAGCATGTAGGGCAAGAAGGAAGGCTGAAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TTCACTTCTCCTTTGGGGCTAAAAATACTGGGACCCAGGCATCCAGCTGGGCCAGTTCTGAATCAAGTTTaGGGCCGCAACCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: FTSPLGLKILGPRHPAGPVLNQV*GRNLHQ
Trigger: TTGATGAAGGTTGCGGCCCAAAACTTGATTCAGAAC...TGGCCCAGCTGGATGCCTGGGTCCCAGTATTTTTAGCCCCAAAGGAGAAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000615911.4
CDS-3UTR CAA 90 bp GAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCATCACTAACTCTTCCAGGCACTaGTCAAAGCGCTGTATGGGT +
Preference number: 5 (lower is better)
Translates to: ECIELFQALVKALYGSITNSSRH*SKRCMG
Trigger: ACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTT...AGTGATGGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR CAA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTTTGCTCGGACTGGTCTaGAATTCCTGGGCTCAAGCC +
Preference number: 5 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCLLGLV*NSWAQA
Trigger: GGCTTGAGCCCAGGAATTCAAGACCAGTCCGAGCAA...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS-3UTR CAA 90 bp GTCACAGAGTGCATAGAACTCTTCCAGGCACTTGTCAAAGCGCTGTATGGGTCCGTTCTGAATCAAGTTTaGGGCCGCAACCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: VTECIELFQALVKALYGSVLNQV*GRNLHQ
Trigger: TTGATGAAGGTTGCGGCCCAAAACTTGATTCAGAAC...GGACCCATACAGCGCTTTGACAAGTGCCTGGAAGAGTTCTATGCACTCTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS-3UTR CAA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGGTGTGTGATGTTGTGTaGACACCACCTGGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMVCDVV*TPPGRA
Trigger: GGCCCTCCCAGGTGGTGTCAACACAACATCACACAC...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp AGAAGTCATCAACACACACAGTTCAAAGTCTACCCTAGGCTAGGAGGGGGAGCAGTTCTGAATCAAGTTTaGGGCCGCAACCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: RSHQHTQFKVYPRLGGGAVLNQV*GRNLHQ
Trigger: TTGATGAAGGTTGCGGCCCAAAACTTGATTCAGAAC...TGCTCCCCCTCCTAGCCTAGGGTAGACTTTGAACTGTGTGTGTTGATGACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000615911.4
CDS-3UTR CAA 90 bp GTTTTATGTGTCAACTTGGACGGGCTACAGTCCCAGTTATTCAAACACTCATCTCGCTCTTCATTCCCTTaGCACACCACCCACCAACCA +
Preference number: 5 (lower is better)
Translates to: VLCVNLDGLQSQLFKHSSRSSFP*HTTHQP
Trigger: TGGTTGGTGGGTGGTGTGCAAAGGGAATGAAGAGCG...AGATGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp TCACTAGAACATCAGCTCCACAAATACAGGCCTTGGGCACAAGATACCCAATGTAGATACCCAATGTGTTaGCTGAGTGCAACTCAGTGG +
Preference number: 5 (lower is better)
Translates to: SLEHQLHKYRPWAQDTQCRYPMC*LSATQW
Trigger: CCACTGAGTTGCACTCAGCAAACACATTGGGTATCT...ACATTGGGTATCTTGTGCCCAAGGCCTGTATTTGTGGAGCTGATGTTCTAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS TCA 90 bp ATGGGTCCATCACTGCTCTTTTGTCCATTGTCGATGTTAGTGTTCTaGATCAAGTTTTGGGCCGCAACCTTCATCAAGGTCTGTAGACTC +
Preference number: 5 (lower is better)
Translates to: MGPSLLFCPLSMLVF*IKFWAATFIKVCRL
Trigger: GAGTCTACAGACCTTGATGAAGGTTGCGGCCCAAAACTTGATTCAGAACACTAACATCGACAATGGACAAAAGAGCAGTGATGGACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000615911.4
CDS-3UTR CAA 90 bp CTGTTGGGGAAAGGGTTAGTTGTCTTCAGTTGTATGCAAGATAACTGCATCATGAGATACCCAATGTGTTaGCTGAGTGCAACTCAGTGG +
Preference number: 5 (lower is better)
Translates to: LLGKGLVVFSCMQDNCIMRYPMC*LSATQW
Trigger: CCACTGAGTTGCACTCAGCAAACACATTGGGTATCT...CATGATGCAGTTATCTTGCATACAACTGAAGACAACTAACCCTTTCCCCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315588.11
ENST00000599417.2
ENST00000615911.4
CDS-3UTR CAA 90 bp GTTTTATGTGTCAACTTGGACGGGCTACAGTCCCAGTTATTCAAACACTCATCTGTTCTGAATCAAGTTTaGGGCCGCAACCTTCATCAA +
Preference number: 5 (lower is better)
Translates to: VLCVNLDGLQSQLFKHSSVLNQV*GRNLHQ
Trigger: TTGATGAAGGTTGCGGCCCAAAACTTGATTCAGAAC...AGATGAGTGTTTGAATAACTGGGACTGTAGCCCGTCCAAGTTGACACATAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315588.11
ENST00000615911.4
CDS CCA 72 bp CAGGAGGCCGCTCTGGGCAGGGCCCACCAGTTGTGCTaGCGGTTGCGGCTGCTGCTGGGGACCCGGGCCGCC +
Preference number: 6 (lower is better)
Translates to: QEAALGRAHQLC*RLRLLLGTRAA
Trigger: GGCGGCCCGGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000599417.2
ENST00000600973.5
ENST00000615911.4
CDS GCA 72 bp GCAGGGCCCACCAGTTGTGCTGGCGGTTGCGGCTGCTaGTGGGGACCCGGGCCGCCAGCCGAACTAGGACCC +
Preference number: 6 (lower is better)
Translates to: AGPTSCAGGCGC*WGPGPPAELGP
Trigger: GGGTCCTAGTTCGGCTGGCGGCCCGGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000599417.2
ENST00000600973.5
ENST00000615911.4
CDS CCA 72 bp GGGCCCACCAGTTGTGCTGGCGGTTGCGGCTGCTGCTaGGGACCCGGGCCGCCAGCCGAACTAGGACCCGAT +
Preference number: 6 (lower is better)
Translates to: GPTSCAGGCGCC*GPGPPAELGPD
Trigger: ATCGGGTCCTAGTTCGGCTGGCGGCCCGGGTCCCCAGCAGCAGCCGCAACCGCCAGCACAACTGGTGGGCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000599417.2
ENST00000600973.5
ENST00000615911.4
CDS CCA 72 bp TCGAAGTCCTGTTGCTGTTGCTGCAGGAGGCCGCTCTaGGCAGGGCCCACCAGTTGTGCTGGCGGTTGCGGC +
Preference number: 6 (lower is better)
Translates to: SKSCCCCCRRPL*AGPTSCAGGCG
Trigger: GCCGCAACCGCCAGCACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000599417.2
ENST00000600973.5
ENST00000615911.4
CDS TCA 72 bp CAACGTTGGAGAGTGCTTGGCACTGTCACAACTCTGTaGCAGGCACTCATGCGCCAGGCGCCCGTGTCCAGA +
Preference number: 6 (lower is better)
Translates to: QRWRVLGTVTTL*QALMRQAPVSR
Trigger: TCTGGACACGGGCGCCTGGCGCATGAGTGCCTGTCACAGAGTTGTGACAGTGCCAAGCACTCTCCAACGTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596297.1
CDS GCA 72 bp GGATGCAGCCATCTTCCTCGCGTAGACCGCCGGAAGTaGGTTACGACTGCGTCTCTCCCCGTTGCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: GCSHLPRVDRRK*VTTASLPVAFQ
Trigger: CTGAAAAGCAACGGGGAGAGACGCAGTCGTAACGCACTTCCGGCGGTCTACGCGAGGAAGATGGCTGCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS CAA 90 bp GATGAGCATCTTATAACGCTGCACAGGATCGAAGTCCTGTTGCTGTaGCTGCAGGAGGCCGCTCTGGGCAGGGCCCACCAGTTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: DEHLITLHRIEVLLL*LQEAALGRAHQLCW
Trigger: CCAGCACAACTGGTGGGCCCTGCCCAGAGCGGCCTCCTGCAGCAACAGCAACAGGACTTCGATCCTGTGCAGCGTTATAAGATGCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000599417.2
ENST00000600973.5
ENST00000615911.4
CDS GCA 72 bp TCTTCCTCGCGTAGACCGCCGGAAGTGCGTTACGACTaGGTCTCTCCCCGTTGCTTTTCAGCATCCCTATTT +
Preference number: 6 (lower is better)
Translates to: SSSRRPPEVRYD*VSPRCFSASLF
Trigger: AAATAGGGATGCTGAAAAGCAACGGGGAGAGACGCAGTCGTAACGCACTTCCGGCGGTCTACGCGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000599417.2
ENST00000615911.4
CDS GCA 72 bp GAGGCAAGAGGATCTCCTAACTCAGGTGTTCAAGGCTaGAATGAGCCAAGATCGTGCCACTGTAGTCCAGCC +
Preference number: 6 (lower is better)
Translates to: EARGSPNSGVQG*NEPRSCHCSPA
Trigger: GGCTGGACTACAGTGGCACGATCTTGGCTCATTGCAGCCTTGAACACCTGAGTTAGGAGATCCTCTTGCCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS TCA 72 bp TCATCAAGGTCTGTAGACTCTCCTTCAGCTGCGGGATaGGCATCTTATAACGCTGCACAGGATCGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: SSRSVDSPSAAG*ASYNAAQDRSP
Trigger: AGGACTTCGATCCTGTGCAGCGTTATAAGATGCTCATCCCGCAGCTGAAGGAGAGTCTACAGACCTTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000600973.5
ENST00000615911.4
CDS TCA 72 bp CAGAGGGAGACCTGTCCATTGTCGATGTTAGTGTTCTaGATCAAGTTTTGGGCCGCAACCTTCATCAAGGTC +
Preference number: 6 (lower is better)
Translates to: QRETCPLSMLVF*IKFWAATFIKV
Trigger: GACCTTGATGAAGGTTGCGGCCCAAAACTTGATTCAGAACACTAACATCGACAATGGACAGGTCTCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600973.5
CDS TCA 72 bp TCACTGCTCTTTTGTCCATTGTCGATGTTAGTGTTCTaGATCAAGTTTTGGGCCGCAACCTTCATCAAGGTC +
Preference number: 6 (lower is better)
Translates to: SLLFCPLSMLVF*IKFWAATFIKV
Trigger: GACCTTGATGAAGGTTGCGGCCCAAAACTTGATTCAGAACACTAACATCGACAATGGACAAAAGAGCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315588.11
ENST00000594368.5
ENST00000596297.1
ENST00000615911.4