RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED28 (Homo sapiens)

Ensembl gene IDs: ENSG00000118579

Ensembl transcript IDs: ENST00000237380.12, ENST00000503945.2

Found 308 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCACACGCTGCTCCAGATGGGTTTTGCTACCAGTTGGGCAGTGAGTaGGCCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCAC +
Preference number: 1 (lower is better)
Translates to: SHAAPDGFCYQLGSE*ASPQASSYCLLSDH
Trigger: GTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGGCTCACTCACTGCCCAACTGGTAGCAAAACCCATCTGGAGCAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 90 bp GCCCCGGGCACTCACAGTCACCTCATCAGTTCCTCACTATCCCTCTaGAGGGAACAGACACTCTACTGTCCTTGTGTGCAGTACTCCTCT +
Preference number: 1 (lower is better)
Translates to: APGTHSHLISSSLSL*REQTLYCPCVQYSS
Trigger: AGAGGAGTACTGCACACAAGGACAGTAGAGTGTCTGTTCCCTGCAGAGGGATAGTGAGGAACTGATGAGGTGACTGTGAGTGCCCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 90 bp CCCTCCAATAACTACATCACCCAGCTTGGACCCAAGCCCCAGCTGTaGCCGGACCTACAAACCCAACCAGTCTACAGATGCAAAAACTGC +
Preference number: 1 (lower is better)
Translates to: PSNNYITQLGPKPQL*PDLQTQPVYRCKNC
Trigger: GCAGTTTTTGCATCTGTAGACTGGTTGGGTTTGTAGGTCCGGCCACAGCTGGGGCTTGGGTCCAAGCTGGGTGATGTAGTTATTGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 90 bp CATTTGCCTCATGGTGTGTTGCTTCTTCACTGCATGAATTCCCAGTaGGTTAAAGGAACCGCAATGGCTGTTCACGGTGCTGACCTTGCT +
Preference number: 1 (lower is better)
Translates to: HLPHGVLLLHCMNSQ*VKGTAMAVHGADLA
Trigger: AGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTCCTTTAACCCACTGGGAATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 90 bp ACTTTGGGGTTGGCATTCAGAGACTGTTTATGTCCAACAGGAGAATaGCATGACCGAACAGTGTTGTCAGCTTCTGAATGTCAGGGACAG +
Preference number: 1 (lower is better)
Translates to: TLGLAFRDCLCPTGE*HDRTVLSASECQGQ
Trigger: CTGTCCCTGACATTCAGAAGCTGACAACACTGTTCGGTCATGCCATTCTCCTGTTGGACATAAACAGTCTCTGAATGCCAACCCCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
3UTR CCA 90 bp TCAGACAGAGGGTGTCACAAAGAACCTCTTTTAGGATTCTGGCCCTaGTTGGGTGATTTCAAGGAAGTGAGGATTCACTCGATTGGATGC +
Preference number: 1 (lower is better)
Translates to: SDRGCHKEPLLGFWP*LGDFKEVRIHSIGC
Trigger: GCATCCAATCGAGTGAATCCTCACTTCCTTGAAATCACCCAACCAGGGCCAGAATCCTAAAAGAGGTTCTTTGTGACACCCTCTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 90 bp GGGTGTGAATGCCTTCAGCCAAAGCCCACCAGAAATGCCTGTATTTaGACAAGTTGGGTCTATTCATCACAGAGAACCATAGGACTTCTC +
Preference number: 1 (lower is better)
Translates to: GCECLQPKPTRNACI*TSWVYSSQRTIGLL
Trigger: GAGAAGTCCTATGGTTCTCTGTGATGAATAGACCCAACTTGTTCAAATACAGGCATTTCTGGTGGGCTTTGGCTGAAGGCATTCACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 90 bp CAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTaGATTCAAATTACAGTCTTCCTCATTCTTAGCTCTGTGGCCTTG +
Preference number: 1 (lower is better)
Translates to: QHGLYKRWTPSGLEV*IQITVFLILSSVAL
Trigger: CAAGGCCACAGAGCTAAGAATGAGGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 90 bp GACTTCTCAGACAGAGGGTGTCACAAAGAACCTCTTTTAGGATTCTaGCCCTGGTTGGGTGATTTCAAGGAAGTGAGGATTCACTCGATT +
Preference number: 1 (lower is better)
Translates to: DFSDRGCHKEPLLGF*PWLGDFKEVRIHSI
Trigger: AATCGAGTGAATCCTCACTTCCTTGAAATCACCCAACCAGGGCCAGAATCCTAAAAGAGGTTCTTTGTGACACCCTCTGTCTGAGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 90 bp TGGAGGTCTGAATTCAAATTACAGTCTTCCTCATTCTTAGCTCTGTaGCCTTGGACAGGTCACTTGACCTCTCCAGGTCTCCATATACCT +
Preference number: 1 (lower is better)
Translates to: WRSEFKLQSSSFLAL*PWTGHLTSPGLHIP
Trigger: AGGTATATGGAGACCTGGAGAGGTCAAGTGACCTGTCCAAGGCCACAGAGCTAAGAATGAGGAAGACTGTAATTTGAATTCAGACCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 90 bp CCCTGGTTGGGTGATTTCAAGGAAGTGAGGATTCACTCGATTGGATaGTGTCAGAATGGGGGCACTGAGCATCTCAATACATCTTATTTA +
Preference number: 1 (lower is better)
Translates to: PWLGDFKEVRIHSIG*CQNGGTEHLNTSYL
Trigger: TAAATAAGATGTATTGAGATGCTCAGTGCCCCCATTCTGACAGCATCCAATCGAGTGAATCCTCACTTCCTTGAAATCACCCAACCAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 90 bp TCTGAATTCAAATTACAGTCTTCCTCATTCTTAGCTCTGTGGCCTTaGACAGGTCACTTGACCTCTCCAGGTCTCCATATACCTTGCCTT +
Preference number: 1 (lower is better)
Translates to: SEFKLQSSSFLALWP*TGHLTSPGLHIPCL
Trigger: AAGGCAAGGTATATGGAGACCTGGAGAGGTCAAGTGACCTGTCCAAGGCCACAGAGCTAAGAATGAGGAAGACTGTAATTTGAATTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 90 bp CACTTTCCCAGGCTGCACTTTGCATTTCTGTCCTTAAACTCAGCATaGTCCCTGGGCAAGGAGAAAATTTTACTAGTTGAGATCGTACAT +
Preference number: 1 (lower is better)
Translates to: HFPRLHFAFLSLNSA*SLGKEKILLVEIVH
Trigger: ATGTACGATCTCAACTAGTAAAATTTTCTCCTTGCCCAGGGATCATGCTGAGTTTAAGGACAGAAATGCAAAGTGCAGCCTGGGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 90 bp GAAAACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTaGAGGTCTGAATTCAAATTACAGTCTTCCTCATTCTTAGCTCTG +
Preference number: 1 (lower is better)
Translates to: ENFSMGYTKGGLHLA*RSEFKLQSSSFLAL
Trigger: CAGAGCTAAGAATGAGGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 90 bp GCTACTTGGTTAATTTTTCTCCAGGATCCATCTGGATTCTGCAGATaGGGCTGGCAAATTAAATGGAACTATGATAGGGACCATCTTACT +
Preference number: 1 (lower is better)
Translates to: ATWLIFLQDPSGFCR*GWQIKWNYDRDHLT
Trigger: AGTAAGATGGTCCCTATCATAGTTCCATTTAATTTGCCAGCCTCATCTGCAGAATCCAGATGGATCCTGGAGAAAAATTAACCAAGTAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGCCTTTCCCCAGCACTTaGCTGTGGGACCCCGTTGTG +
Preference number: 2 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWPFPST*LWDPVV
Trigger: CACAACGGGGTCCCACAGGCAAGTGCTGGGGAAAGG...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGAGGCTACCTGATGGCTaGGTGGGCCTTTCCCCAGCA +
Preference number: 2 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWRLPDG*VGLSPA
Trigger: TGCTGGGGAAAGGCCCACCCAGCCATCAGGTAGCCT...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATCTCCACTGTGCTTGGTaGCAGCCAGGACCAGCATGC +
Preference number: 2 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNLHCAW*QPGPAC
Trigger: GCATGCTGGTCCTGGCTGTCACCAAGCACAGTGGAG...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCCAGCCAGGACCAGCATaGCCTGGGCAGGAACATGGC +
Preference number: 2 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFQPGPA*PGQEHG
Trigger: GCCATGTTCCTGCCCAGGGCATGCTGGTCCTGGCTG...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGGATCAGGCACATGAGTaGATGTCAGTCCATGTGGGA +
Preference number: 2 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWDQAHE*MSVHVG
Trigger: TCCCACATGGACTGACATCCACTCATGTGCCTGATC...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGGGGAGGAATGTCAAATaGCTGAAAAGGTCACCCACC +
Preference number: 2 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWGRNVK*LKRSPT
Trigger: GGTGGGTGACCTTTTCAGCCATTTGACATTCCTCCC...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATACAGGAAGGAATGTGTaGCCAACCTCACGCATCAGC +
Preference number: 2 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNTGRNV*PTSRIS
Trigger: GCTGATGCGTGAGGTTGGCCACACATTCCTTCCTGT...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGTTCAGTCTTTGGTGCTaGCCCAGAAGGTGGCCCACA +
Preference number: 2 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLFSLWC*PRRWPT
Trigger: TGTGGGCCACCTTCTGGGCCAGCACCAAAGACTGAA...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATTCAAAGTTGAAAGCCTaGAGCCTGTGGGCAGACCTA +
Preference number: 2 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNSKLKA*SLWADL
Trigger: TAGGTCTGCCCACAGGCTTCAGGCTTTCAACTTTGA...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCCCCAGCACTTGCCTGTaGGACCCCGTTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSPSTCL*DPVVPL
Trigger: CAGTGGCACAACGGGGTCCCACAGGCAAGTGCTGGG...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCAGCAGATATGGAGTCTaGGGAGGGCCCATTCTTCAG +
Preference number: 2 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFSRYGV*GGPILQ
Trigger: CTGAAGAATGGGCCCTCCCCAGACTCCATATCTGCT...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATAGGCAGAGGTTCTTCTaGGAGGAATGTCAAATGGCT +
Preference number: 2 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNRQRFF*EECQMA
Trigger: AGCCATTTGACATTCCTCCCAGAAGAACCTCTGCCT...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCTTAAAGGAACCGCAATaGCTGTTCACGGTGCTGACC +
Preference number: 2 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFLKEPQ*LFTVLT
Trigger: GGTCAGCACCGTGAACAGCCATTGCGGTTCCTTTAA...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp CCCAGTGGGTTAAAGGAACCGCAATGGCTGTTCACGGTGCTGACCTaGCTCTCAGTCCACACTGATTTGTCTTACCTTCTGACAGAGCAA +
Preference number: 2 (lower is better)
Translates to: PSGLKEPQWLFTVLT*LSVHTDLSYLLTEQ
Trigger: TTGCTCTGTCAGAAGGTAAGACAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTCCTTTAACCCACTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGACTGAAAACAGTGACTaGCCCATTAAACAGATTCAT +
Preference number: 2 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWTENSD*PIKQIH
Trigger: ATGAATCTGTTTAATGGGTCAGTCACTGTTTTCAGT...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCCTCCTGACCTCAAAGTaGTCCTCCAAGATAACGACA +
Preference number: 2 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFLLTSK*SSKITT
Trigger: TGTCGTTATCTTGGAGGATCACTTTGAGGTCAGGAG...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGTCCTTAAACTCAGCATaGTCCCTGGGCAAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLSLNSA*SLGKEK
Trigger: TTTCTCCTTGCCCAGGGATCATGCTGAGTTTAAGGA...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp CTAAGGTCAAGCACCAAGCCAGACCAGAACGTACCCCTGGACAATCACAGCAGGGGGAACTTGAGAAGATaGCTTGTGATTTTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: LRSSTKPDQNVPLDNHSRGNLRR*LVIFSL
Trigger: CAGGGAGAAAATCACAAGCCATCTTCTCAAGTTCCC...CCTGCTGTGATTGTCCAGGGGTACGTTCTGGTCTGGCTTGGTGCTTGACCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp CACTCTACTGTCCTTGTGTGCAGTACTCCTCTTATCTTCCACAGTTaGACTCCTCCCATTCCCCTCCACAGGGATATTTTCCCAGGGTAC +
Preference number: 2 (lower is better)
Translates to: HSTVLVCSTPLIFHS*TPPIPLHRDIFPGY
Trigger: GTACCCTGGGAAAATATCCCTGTGGAGGGGAATGGGAGGAGTCAAACTGTGGAAGATAAGAGGAGTACTGCACACAAGGACAGTAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCATCGTACATAGGTTTTaGCTCCTTTCTTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFIVHRF*LLSCCR
Trigger: CCTGCAGCAAGAAAGGAGTCAAAACCTATGTACGAT...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGTTCTTCAGAAATGGGTaGCTGCTACGTGTCCTTACA +
Preference number: 2 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLFFRNG*LLRVLT
Trigger: TGTAAGGACACGTAGCAGGCACCCATTTCTGAAGAA...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCTACAGATGCAAAAACTaGCACAAGGTTTGGGGGATG +
Preference number: 2 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFYRCKN*HKVWGM
Trigger: CATCCCCCAAACCTTGTGGCAGTTTTTGCATCTGTA...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATGAGCAACTTTGGGGTTaGCATTCAGAGACTGTTTAT +
Preference number: 2 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNEQLWG*HSETVY
Trigger: ATAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTC...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp CTGAACCTCTGGTCTTTGGGTTTGAGCCATTTGCCTCATGGTGTGTaGCTTCTTCACTGCATGAATTCCCAGTGGGTTAAAGGAACCGCA +
Preference number: 2 (lower is better)
Translates to: LNLWSLGLSHLPHGV*LLHCMNSQWVKGTA
Trigger: TGCGGTTCCTTTAACCCACTGGGAATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAGGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCCTCACTATCCCTCTaGAGGGAACAGACACTCTAC +
Preference number: 2 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNSSLSL*REQTLY
Trigger: GTAGAGTGTCTGTTCCCTGCAGAGGGATAGTGAGGA...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCGGAATGTCAAATGGCTaGAAAGGTCACCCACCAGCT +
Preference number: 2 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSGMSNG*KGHPPA
Trigger: AGCTGGTGGGTGACCTTTTCAGCCATTTGACATTCC...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp ATGAATTTTGGAAGGGACATCAACATTCAGGACATAGCAGTGAACCCTGTAGGAGGCGGACAGATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: MNFGRDINIQDIAVNPVGGGQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCTGTCCGCC...TCCTACAGGGTTCACTGCTATGTCCTGAATGTTGATGTCCCTTCCAAAATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATATTCACTCGATTGGATaGTGTCAGAATGGGGGCACT +
Preference number: 2 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNIHSIG*CQNGGT
Trigger: AGTGCCCCCATTCTGACAGCATCCAATCGAGTGAAT...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCGAGGATTCACTCGATTaGATGCTGTCAGAATGGGGG +
Preference number: 2 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSEDSLD*MLSEWG
Trigger: CCCCCATTCTGACAGCATCCAATCGAGTGAATCCTC...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTTACCAGAGCAGTGCTTaGCAGAGGGCATTCCACAGG +
Preference number: 2 (lower is better)
Translates to: FILSWPESNFGVGIQRLFYQSSA*QRAFHR
Trigger: CCTGTGGAATGCCCTCTGCCAAGCACTGCTCTGGTA...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
3UTR-3UTR CCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCGAGCCATTTGCCTCATaGTGTGTTGCTTCTTCACTG +
Preference number: 2 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSEPFAS*CVASSL
Trigger: CAGTGAAGAAGCAACACACCATGAGGCAAATGGCTC...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp ATGCCTTCAGCCAAAGCCCACCAGAAATGCCTGTATTTGAACAAGTaGGGTCTATTCATCACAGAGAACCATAGGACTTCTCAGACAGAG +
Preference number: 2 (lower is better)
Translates to: MPSAKAHQKCLYLNK*GLFITENHRTSQTE
Trigger: CTCTGTCTGAGAAGTCCTATGGTTCTCTGTGATGAATAGACCCAACTTGTTCAAATACAGGCATTTCTGGTGGGCTTTGGCTGAAGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp CAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTaGTCTTACCTTCTGACAGAGCAATGTGATTTGACAAGACTCAAT +
Preference number: 2 (lower is better)
Translates to: QWLFTVLTLLSVHTD*SYLLTEQCDLTRLN
Trigger: ATTGAGTCTTGTCAAATCACATTGCTCTGTCAGAAGGTAAGACAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGCTGGCCCTGGTTGGGTaGTTTCAAGGAAGTGAGGAT +
Preference number: 2 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWLALVG*FQGSED
Trigger: ATCCTCACTTCCTTGAAATCACCCAACCAGGGCCAG...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCCTTCTGTTTTCCAAATaGGGATTAGGTACTCCCTCC +
Preference number: 2 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSLLFSK*GLGTPS
Trigger: GGAGGGAGTACCTAATCCTCATTTGGAAAACAGAAG...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGAAGACTACATACAGGTaGTTCTATTTTTGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLKTTYR*FYFCVL
Trigger: CAACACACAAAAATAGAACCACCTGTATGTAGTCTT...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp ATATATATATATCCCCTGAACCTCTGGTCTTTGGGTTTGAGCCATTaGCCTCATGGTGTGTTGCTTCTTCACTGCATGAATTCCCAGTGG +
Preference number: 2 (lower is better)
Translates to: IYIYPLNLWSLGLSH*PHGVLLLHCMNSQW
Trigger: CCACTGGGAATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAGGTTCAGGGGATATATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCGAAAACCTTACCCAATaGGAGCCAGAAATCTCCATT +
Preference number: 2 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSENLTQ*EPEISI
Trigger: AATGGAGATTTCTGGCTCTCATTGGGTAAGGTTTTC...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTAAGGCAGAGGTTGCAGTaGGCCAAGTTCGAACTCCTG +
Preference number: 2 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLRQRLQ*AKFELL
Trigger: CAGGAGTTCGAACTTGGCTCACTGCAACCTCTGCCT...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATAAAGCCCACCAGAAATaGCTGTATTTGAACAAGTTG +
Preference number: 2 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNKAHQK*LYLNKL
Trigger: CAACTTGTTCAAATACAGGCATTTCTGGTGGGCTTT...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGGTAATCTCAGTACTTTaGGAGGCTGAGGCGGACAGA +
Preference number: 2 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWVISVL*EAEADR
Trigger: TCTGTCCGCCTCAGCCTCCCAAAGTACTGAGATTAC...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATGGCTGGCAAATTAAATaGAACTATGATAGGGACCAT +
Preference number: 2 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNGWQIK*NYDRDH
Trigger: ATGGTCCCTATCATAGTTCCATTTAATTTGCCAGCC...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCCTTTCCCTGAAAAGATaGTGGGTATTAAGCTGCTTC +
Preference number: 2 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSLSLKR*WVLSCF
Trigger: GAAGCAGCTTAATACCCACCATCTTTTCAGGGAAAG...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTTAGGTTCCAACATATaGATTTTGGAAGGGACATCA +
Preference number: 2 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNLGSNI*ILEGTS
Trigger: TGATGTCCCTTCCAAAATTCATATGTTGGAACCTAA...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATAAAAGGCCTTCTTGGTaGAACTTTCTACCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNKRPSW*NFLPFK
Trigger: TTTGAAAGGTAGAAAGTTCCACCAAGAAGGCCTTTT...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp TTCAAATCCTGCTTCTGCCAAAGGTTAAAGACTAACCTCTTGACTTaGGGCAAATCACTTAACCCACCTAAATCCCATACTCTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: FKSCFCQRLKTNLLT*GKSLNPPKSHTLPP
Trigger: TGGAGGAAGAGTATGGGATTTAGGTGGGTTAAGTGATTTGCCCAAAGTCAAGAGGTTAGTCTTTAACCTTTGGCAGAAGCAGGATTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp ATGAATTTTGGAAGGGACATCAACATTCAGGACATAGCAGTGAACCCTGTAGGAAAAACTCCCATCTCCTaGTTCTCAGGCTACTATACT +
Preference number: 2 (lower is better)
Translates to: MNFGRDINIQDIAVNPVGKTPIS*FSGYYT
Trigger: AGTATAGTAGCCTGAGAATCAGGAGATGGGAGTTTT...TCCTACAGGGTTCACTGCTATGTCCTGAATGTTGATGTCCCTTCCAAAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTCTGAAGACAACAAAATaGGTCAAGGCACAAAGCCAC +
Preference number: 2 (lower is better)
Translates to: FILSWPESNFGVGIQRLFLKTTK*VKAQSH
Trigger: GTGGCTTTGTGCCTTGACTCATTTTGTTGTCTTCAG...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTAGATTCACCCAGTCAATaGCTGCACACCACATACCTG +
Preference number: 2 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLDSPSQ*LHTTYL
Trigger: CAGGTATGTGGTGTGCAGCCATTGACTGGGTGAATC...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCATACTCCATTTTGTaGAACATCAGACTTTGTGAT +
Preference number: 2 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNSYSIL*NIRLCD
Trigger: ATCACAAAGTCTGATGTTCCACAAAATGGAGTATGA...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp ACTCACTTCAAATCCTGCTTCTGCCAAAGGTTAAAGACTAACCTCTaGACTTTGGGCAAATCACTTAACCCACCTAAATCCCATACTCTT +
Preference number: 2 (lower is better)
Translates to: THFKSCFCQRLKTNL*TLGKSLNPPKSHTL
Trigger: AAGAGTATGGGATTTAGGTGGGTTAAGTGATTTGCCCAAAGTCAAGAGGTTAGTCTTTAACCTTTGGCAGAAGCAGGATTTGAAGTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp TTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTaGGCATTCAGAGACTGTTTATGTCCAACAGGAGAATGGCATGAC +
Preference number: 2 (lower is better)
Translates to: LLSGLFYHGLRATLG*AFRDCLCPTGEWHD
Trigger: GTCATGCCATTCTCCTGTTGGACATAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
3UTR-3UTR CCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTAAACTGCTTAAACCTCTaGGAGGCAGAGGTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLNCLNL*EAEVLL
Trigger: CAGAAGAACCTCTGCCTCCCAGAGGTTTAAGCAGTT...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 90 bp TGTGCTTTCAAAAAGACTACATACAGGTGGTTCTATTTTTGTGTGTaGAAACACTTTCCCAGGCTGCACTTTGCATTTCTGTCCTTAAAC +
Preference number: 2 (lower is better)
Translates to: CAFKKTTYRWFYFCV*KHFPRLHFAFLSLN
Trigger: GTTTAAGGACAGAAATGCAAAGTGCAGCCTGGGAAAGTGTTTCAACACACAAAAATAGAACCACCTGTATGTAGTCTTTTTGAAAGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR TCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGCCCAACATTTGTGATTaGGGCTACTTGGTTAATTTT +
Preference number: 2 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWPNICD*GYLVNF
Trigger: AAAATTAACCAAGTAGCCTCAATCACAAATGTTGGG...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTTTCAAATCCTGCTTCTaGCAAAGGTTAAAGACTAAC +
Preference number: 2 (lower is better)
Translates to: FILSWPESNFGVGIQRLFFKSCF*QRLKTN
Trigger: GTTAGTCTTTAACCTTTGGCAGAAGCAGGATTTGAA...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTAACATCTCCTTTAATCTaGAGAAGTAATCCTGGGGAA +
Preference number: 2 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLTSPLI*RSNPGE
Trigger: TTCCCCAGGATTACTTCTGCAGATTAAAGGAGATGT...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTAGATGCAATTCCAAAATaGACATCTAACCTCAATAGG +
Preference number: 2 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLDAIPK*TSNLNR
Trigger: CCTATTGAGGTTAGATGTGCATTTTGGAATTGCATC...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR GCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTATGGTGGGTATTAAGCTaGTTCTTGCATAGTTTTCAA +
Preference number: 2 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLWWVLS*FLHSFQ
Trigger: TTGAAAACTATGCAAGAAGCAGCTTAATACCCACCA...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTAGTGATTGAGGCTACTTaGTTAATTTTTCTCCAGGAT +
Preference number: 2 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLVIEAT*LIFLQD
Trigger: ATCCTGGAGAAAAATTAACCAAGTAGCCTCAATCAC...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp CCACTGTGCTTGGTGACAGCCAGGACCAGCATGCCCTaGGCAGGAACATGGCGGCAGGTCCCCAATGCCAGG +
Preference number: 3 (lower is better)
Translates to: PLCLVTARTSMP*AGTWRQVPNAR
Trigger: CCTGGCATTGGGGACCTGCCGCCATGTTCCTGCCCAGGGCATGCTGGTCCTGGCTGTCACCAAGCACAGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp CCTGTAATTCCAGCTCCCCGGGAGGCTGAGGCACAATaGTCGCTTGAACGCAGGAGGCTGGAGGTTGCAGTG +
Preference number: 3 (lower is better)
Translates to: PVIPAPREAEAQ*SLERRRLEVAV
Trigger: CACTGCAACCTCCAGCCTCCTGCGTTCAAGCGATCATTGTGCCTCAGCCTCCCGGGGAGCTGGAATTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp GTGACAGCCAGGACCAGCATGCCCTGGGCAGGAACATaGCGGCAGGTCCCCAATGCCAGGAGCTTTTGTAAT +
Preference number: 3 (lower is better)
Translates to: VTARTSMPWAGT*RQVPNARSFCN
Trigger: ATTACAAAAGCTCCTGGCATTGGGGACCTGCCGCCATGTTCCTGCCCAGGGCATGCTGGTCCTGGCTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp AGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGTaGCAGCCAGGACCAGCATGCCCTGGGCAGGAACAT +
Preference number: 3 (lower is better)
Translates to: RNGLAPDLHCAW*QPGPACPGQEH
Trigger: ATGTTCCTGCCCAGGGCATGCTGGTCCTGGCTGTCACCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp GCTCCAGATGGGTTTTGCTACCAGTTGGGCAGTGAGTaGGCCAGTCCCCAAGCCTCATCCTACTGCCTGCTC +
Preference number: 3 (lower is better)
Translates to: APDGFCYQLGSE*ASPQASSYCLL
Trigger: GAGCAGGCAGTAGGATGAGGCTTGGGGACTGGCTCACTCACTGCCCAACTGGTAGCAAAACCCATCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 72 bp CAGCCGCGTGGTCAGCGTGCCGAACCTCGCCTCCTATaGAAAGAACTTTCTGAGTGGCGATCTGAGTTCCAG +
Preference number: 3 (lower is better)
Translates to: QPRGQRAEPRLL*KELSEWRSEFQ
Trigger: CTGGAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACGCTGACCACGCGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp CCTCACACGCTGCTCCAGATGGGTTTTGCTACCAGTTaGGCAGTGAGTGAGCCAGTCCCCAAGCCTCATCCT +
Preference number: 3 (lower is better)
Translates to: PHTLLQMGFATS*AVSEPVPKPHP
Trigger: AGGATGAGGCTTGGGGACTGGCTCACTCACTGCCCAACTGGTAGCAAAACCCATCTGGAGCAGCGTGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp AACTACATCACCCAGCTTGGACCCAAGCCCCAGCTGTaGCCGGACCTACAAACCCAACCAGTCTACAGATGC +
Preference number: 3 (lower is better)
Translates to: NYITQLGPKPQL*PDLQTQPVYRC
Trigger: GCATCTGTAGACTGGTTGGGTTTGTAGGTCCGGCCACAGCTGGGGCTTGGGTCCAAGCTGGGTGATGTAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGGCCCTCATGACTCCATaGCTTCCCAAAAGCCCCACC +
Preference number: 3 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLALMTP*LPKSPT
Trigger: GGTGGGGCTTTTGGGAAGCAATGGAGTCATGAGGGC...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCACTACATCACCCAGCTaGGACCCAAGCCCCAGCTGT +
Preference number: 3 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFTTSPS*DPSPSC
Trigger: ACAGCTGGGGCTTGGGTCCAAGCTGGGTGATGTAGT...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATCAGGCAATCTGCATCTaGGAGCCTGACAAGGAAGCT +
Preference number: 3 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNQAICI*EPDKEA
Trigger: AGCTTCCTTGTCAGGCTCCAAGATGCAGATTGCCTG...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp GAGGGCAGGACAGCTCCAAAGATGTCATGGCCAGGCTaGTGGAAGCGCCCAAGCAGACTGCTCAGTATTTTT +
Preference number: 3 (lower is better)
Translates to: EGRTAPKMSWPG*WKRPSRLLSIF
Trigger: AAAAATACTGAGCAGTCTGCTTGGGCGCTTCCATCAGCCTGGCCATGACATCTTTGGAGCTGTCCTGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 72 bp GTGAGTGAGCCAGTCCCCAAGCCTCATCCTACTGCCTaGTCTCAGACCACATCCAGTCACAATTGTCTCAGT +
Preference number: 3 (lower is better)
Translates to: VSEPVPKPHPTA*SQTTSSHNCLS
Trigger: ACTGAGACAATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGGCTCACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 72 bp CTGTGGCCGGACCTACAAACCCAACCAGTCTACAGATaGAAAAACTGCCACAAGGTTTGGGGGATGTTGGGG +
Preference number: 3 (lower is better)
Translates to: LWPDLQTQPVYR*KNCHKVWGMLG
Trigger: CCCCAACATCCCCCAAACCTTGTGGCAGTTTTTGCATCTGTAGACTGGTTGGGTTTGTAGGTCCGGCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp TTCAGAAATGGGTGCCTGCTACGTGTCCTTACATGGTaGAAGAGGCAAGAGCGCCTCCCTGAGCCTCTTTTG +
Preference number: 3 (lower is better)
Translates to: FRNGCLLRVLTW*KRQERLPEPLL
Trigger: CAAAAGAGGCTCAGGGAGGCGCTCTTGCCTCTTCCACCATGTAAGGACACGTAGCAGGCACCCATTTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp TTCTTCAGAAATGGGTGCCTGCTACGTGTCCTTACATaGTGGAAGAGGCAAGAGCGCCTCCCTGAGCCTCTT +
Preference number: 3 (lower is better)
Translates to: FFRNGCLLRVLT*WKRQERLPEPL
Trigger: AAGAGGCTCAGGGAGGCGCTCTTGCCTCTTCCACCATGTAAGGACACGTAGCAGGCACCCATTTCTGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCTTCACGGTGCTGACCTaGCTCTCAGTCCACACTGAT +
Preference number: 3 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFFTVLT*LSVHTD
Trigger: ATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAA...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 72 bp CAAGACATAATACTCCACTCCCCAGTACCAGAGCAGTaGTTGGCAGAGGGCATTCCACAGGTTTCTAGGGGA +
Preference number: 3 (lower is better)
Translates to: QDIILHSPVPEQ*LAEGIPQVSRG
Trigger: TCCCCTAGAAACCTGTGGAATGCCCTCTGCCAAGCACTGCTCTGGTACTGGGGAGTGGAGTATTATGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
3UTR-3UTR CAA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGTTCTCAAGAACCTCTTaGAAAGAACGCCTAAAACCT +
Preference number: 3 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWFSRTS*KERLKP
Trigger: AGGTTTTAGGCGTTCTTTCAAAGAGGTTCTTGAGAA...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCCTTGAGTCCAGGAATTaGAGACCAGCCTGGCCAATA +
Preference number: 3 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFLESRN*RPAWPI
Trigger: TATTGGCCAGGCTGGTCTCAAATTCCTGGACTCAAG...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp AACCTTGGCTTCTTAAGAACACCCTGGAACCACAGGTaGGTGGGCTGTTATCAACACACTGACCAGGGAAGA +
Preference number: 3 (lower is better)
Translates to: NLGFLRTPWNHR*VGCYQHTDQGR
Trigger: TCTTCCCTGGTCAGTGTGTTGATAACAGCCCACCCACCTGTGGTTCCAGGGTGTTCTTAAGAAGCCAAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp GCCATTTGCCTCATGGTGTGTTGCTTCTTCACTGCATaGATTCCCAGTGGGTTAAAGGAACCGCAATGGCTG +
Preference number: 3 (lower is better)
Translates to: AICLMVCCFFTA*IPSGLKEPQWL
Trigger: CAGCCATTGCGGTTCCTTTAACCCACTGGGAATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 72 bp CCCTCTGCAGGGAACAGACACTCTACTGTCCTTGTGTaGAGTACTCCTCTTATCTTCCACAGTTTGACTCCT +
Preference number: 3 (lower is better)
Translates to: PSAGNRHSTVLV*STPLIFHSLTP
Trigger: AGGAGTCAAACTGTGGAAGATAAGAGGAGTACTGCACACAAGGACAGTAGAGTGTCTGTTCCCTGCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp CATGGTGTGTTGCTTCTTCACTGCATGAATTCCCAGTaGGTTAAAGGAACCGCAATGGCTGTTCACGGTGCT +
Preference number: 3 (lower is better)
Translates to: HGVLLLHCMNSQ*VKGTAMAVHGA
Trigger: AGCACCGTGAACAGCCATTGCGGTTCCTTTAACCCACTGGGAATTCATGCAGTGAAGAAGCAACACACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTAGCCTGTGGGACCCCGTaGTGCCACTGCACTACAGCC +
Preference number: 3 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLACGTP*CHCTTA
Trigger: GGCTGTAGTGCAGTGGCACAACGGGGTCCCACAGGC...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCGGATTCTGGCCCTGGTaGGGTGATTTCAAGGAAGTG +
Preference number: 3 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSGFWPW*GDFKEV
Trigger: CACTTCCTTGAAATCACCCAACCAGGGCCAGAATCC...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp AGGGTACTTATCCTACTCATGAGGGTGAAGCCCTCATaGCTCCATTGCTTCCCAAAAGCCCCACCTCTTAAT +
Preference number: 3 (lower is better)
Translates to: RVLILLMRVKPS*LHCFPKAPPLN
Trigger: ATTAAGAGGTGGGGCTTTTGGGAAGCAATGGAGTCATGAGGGCTTCACCCTCATGAGTAGGATAAGTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 72 bp GGTTTATCTGTGGAGAGAGATAGCCCACAGGCAATCTaGATCTTGGAGCCTGACAAGGAAGCTAAGCAGTAT +
Preference number: 3 (lower is better)
Translates to: GLSVERDSPQAI*ILEPDKEAKQY
Trigger: ATACTGCTTAGCTTCCTTGTCAGGCTCCAAGATGCAGATTGCCTGTGGGCTATCTCTCTCCACAGATAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp CTGTGGAGAGAGATAGCCCACAGGCAATCTGCATCTTaGAGCCTGACAAGGAAGCTAAGCAGTATTCAAGAA +
Preference number: 3 (lower is better)
Translates to: LWREIAHRQSAS*SLTRKLSSIQE
Trigger: TTCTTGAATACTGCTTAGCTTCCTTGTCAGGCTCCAAGATGCAGATTGCCTGTGGGCTATCTCTCTCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp GGGTGTCACAAAGAACCTCTTTTAGGATTCTGGCCCTaGTTGGGTGATTTCAAGGAAGTGAGGATTCACTCG +
Preference number: 3 (lower is better)
Translates to: GCHKEPLLGFWP*LGDFKEVRIHS
Trigger: CGAGTGAATCCTCACTTCCTTGAAATCACCCAACCAGGGCCAGAATCCTAAAAGAGGTTCTTTGTGACACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp GAACCTCTGGTCTTTGGGTTTGAGCCATTTGCCTCATaGTGTGTTGCTTCTTCACTGCATGAATTCCCAGTG +
Preference number: 3 (lower is better)
Translates to: EPLVFGFEPFAS*CVASSLHEFPV
Trigger: CACTGGGAATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGGTACCAGAGCAGTGCTaGGCAGAGGGCATTCCACAG +
Preference number: 3 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWVPEQC*AEGIPQ
Trigger: CTGTGGAATGCCCTCTGCCAAGCACTGCTCTGGTAC...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATTTAAAGACTAACCTCTaGACTTTGGGCAAATCACTT +
Preference number: 3 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNLKTNL*TLGKSL
Trigger: AAGTGATTTGCCCAAAGTCAAGAGGTTAGTCTTTAA...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCCAGGTGGTTCTATTTTaGTGTGTTGAAACACTTTCC +
Preference number: 3 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFQVVLF*CVETLS
Trigger: GGAAAGTGTTTCAACACACAAAAATAGAACCACCTG...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp TGGATTCACCCAGTCAATGGCTGCACACCACATACCTaGGCCCTTAACTGCTCTAACACTGATGTAATATCC +
Preference number: 3 (lower is better)
Translates to: WIHPVNGCTPHT*ALNCSNTDVIS
Trigger: GGATATTACATCAGTGTTAGAGCAGTTAAGGGCTCAGGTATGTGGTGTGCAGCCATTGACTGGGTGAATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 72 bp GGTGATTTCAAGGAAGTGAGGATTCACTCGATTGGATaGTGTCAGAATGGGGGCACTGAGCATCTCAATACA +
Preference number: 3 (lower is better)
Translates to: GDFKEVRIHSIG*CQNGGTEHLNT
Trigger: TGTATTGAGATGCTCAGTGCCCCCATTCTGACAGCATCCAATCGAGTGAATCCTCACTTCCTTGAAATCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp GACAGAGGGTGTCACAAAGAACCTCTTTTAGGATTCTaGCCCTGGTTGGGTGATTTCAAGGAAGTGAGGATT +
Preference number: 3 (lower is better)
Translates to: DRGCHKEPLLGF*PWLGDFKEVRI
Trigger: AATCCTCACTTCCTTGAAATCACCCAACCAGGGCCAGAATCCTAAAAGAGGTTCTTTGTGACACCCTCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp AAATTACAGTCTTCCTCATTCTTAGCTCTGTGGCCTTaGACAGGTCACTTGACCTCTCCAGGTCTCCATATA +
Preference number: 3 (lower is better)
Translates to: KLQSSSFLALWP*TGHLTSPGLHI
Trigger: TATATGGAGACCTGGAGAGGTCAAGTGACCTGTCCAAGGCCACAGAGCTAAGAATGAGGAAGACTGTAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp TGCCTTCAGCCAAAGCCCACCAGAAATGCCTGTATTTaGACAAGTTGGGTCTATTCATCACAGAGAACCATA +
Preference number: 3 (lower is better)
Translates to: CLQPKPTRNACI*TSWVYSSQRTI
Trigger: TATGGTTCTCTGTGATGAATAGACCCAACTTGTTCAAATACAGGCATTTCTGGTGGGCTTTGGCTGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR GCA 72 bp AAGAGGGGTGTGAAAACTCACTTCAAATCCTGCTTCTaGCAAAGGTTAAAGACTAACCTCTTGACTTTGGGC +
Preference number: 3 (lower is better)
Translates to: KRGVKTHFKSCF*QRLKTNLLTLG
Trigger: GCCCAAAGTCAAGAGGTTAGTCTTTAACCTTTGGCAGAAGCAGGATTTGAAGTGAGTTTTCACACCCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp AGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTaGAGGTCTGAATTCAAATTACAGTCTTCCTCATTC +
Preference number: 3 (lower is better)
Translates to: SMGYTKGGLHLA*RSEFKLQSSSF
Trigger: GAATGAGGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTaGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCT +
Preference number: 3 (lower is better)
Translates to: TSAWVIQKVDSI*PGGLNSNYSLP
Trigger: AGGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR-3UTR CAA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGGTTTTGACTCCTTTCTaGCTGCAGGTGACTGAAAAG +
Preference number: 3 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWVLTPF*LQVTEK
Trigger: CTTTTCAGTCACCTGCAGCAAGAAAGGAGTCAAAAC...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp TTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTaGATTCAAATTACAGTCTTCCTCATTCTTAGCTCT +
Preference number: 3 (lower is better)
Translates to: LYKRWTPSGLEV*IQITVFLILSS
Trigger: AGAGCTAAGAATGAGGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp TTAATTTTTCTCCAGGATCCATCTGGATTCTGCAGATaGGGCTGGCAAATTAAATGGAACTATGATAGGGAC +
Preference number: 3 (lower is better)
Translates to: LIFLQDPSGFCR*GWQIKWNYDRD
Trigger: GTCCCTATCATAGTTCCATTTAATTTGCCAGCCTCATCTGCAGAATCCAGATGGATCCTGGAGAAAAATTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CCA 72 bp GTAATATCCAACCCAACATTTGTGATTGAGGCTACTTaGTTAATTTTTCTCCAGGATCCATCTGGATTCTGC +
Preference number: 3 (lower is better)
Translates to: VISNPTFVIEAT*LIFLQDPSGFC
Trigger: GCAGAATCCAGATGGATCCTGGAGAAAAATTAACCAAGTAGCCTCAATCACAAATGTTGGGTTGGATATTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp AAAAGACTACATACAGGTGGTTCTATTTTTGTGTGTTaGAACACTTTCCCAGGCTGCACTTTGCATTTCTGT +
Preference number: 3 (lower is better)
Translates to: KRLHTGGSIFVC*NTFPGCTLHFC
Trigger: ACAGAAATGCAAAGTGCAGCCTGGGAAAGTGTTTCAACACACAAAAATAGAACCACCTGTATGTAGTCTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp GTTATAGGTCTCAGTGTAATGACCATAGTGCCAACATaGTCACTTGTGAAGGTCTCTAGATTATCTGTTCTT +
Preference number: 3 (lower is better)
Translates to: VIGLSVMTIVPT*SLVKVSRLSVL
Trigger: AAGAACAGATAATCTAGAGACCTTCACAAGTGATCATGTTGGCACTATGGTCATTACACTGAGACCTATAAC
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR TCA 72 bp AAGTTTCTAACAATTTACACCCTTACCAGCAGTAAATaGACCTACTGTGCCCTAACACTATTGACAAAGAAA +
Preference number: 3 (lower is better)
Translates to: KFLTIYTLTSSK*TYCALTLLTKK
Trigger: TTTCTTTGTCAATAGTGTTAGGGCACAGTAGGTTCATTTACTGCTGGTAAGGGTGTAAATTGTTAGAAACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp CTAAGGTCAAGCACCAAGCCAGACCAGAACGTACCCCTGGACAATCACAGCAGGAGAAGGTGGAGGACGTaGCCAGCCGCGTGGTCAGCG +
Preference number: 4 (lower is better)
Translates to: LRSSTKPDQNVPLDNHSRRRWRT*PAAWSA
Trigger: CGCTGACCACGCGGCTGGGCACGTCCTCCACCTTCT...CCTGCTGTGATTGTCCAGGGGTACGTTCTGGTCTGGCTTGGTGCTTGACCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGTCTGGTCTTTGGGTTTaGGCCATTTGCCTCATGGTG +
Preference number: 4 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWSGLWV*AICLMV
Trigger: CACCATGAGGCAAATGGCTCAAACCCAAAGACCAGA...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATACGTGCCCAGCCGCGTaGTCAGCGTGCCGAACCTCG +
Preference number: 4 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNTCPAA*SACRTS
Trigger: CGAGGTTCGGCACGCTGACCACGCGGCTGGGCACGT...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp TCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATaGTCTCAGTCAGGTCCTCCACCAGGCATGCCCCGA +
Preference number: 4 (lower is better)
Translates to: SYCLLSDHIQSQ*SQSGPPPGMPR
Trigger: TCGGGGCATGCCTGGTGGAGGACCTGACTGAGACAATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCCTGGCCCTGGTTGGGTaGTTTCAAGGAAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFLALVG*FQGSED
Trigger: ATCCTCACTTCCTTGAAATCACCCAACCAGGGCCAG...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGTCTATTTTTGTGTGTTaGAACACTTTCCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWSIFVC*NTFPGC
Trigger: GCAGCCTGGGAAAGTGTTTCAACACACAAAAATAGA...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCAGTACCAGAGCAGTGCGATGGGAGGAGAGCTTaGGGCCAGGAATTTGAGACC +
Preference number: 4 (lower is better)
Translates to: SRSLFQDIILHSPVPEQCDGRRA*GQEFET
Trigger: GGTCTCAAATTCCTGGCCTCAAGCTCTCCTCCCATC...GCACTGCTCTGGTACTGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATTCCTCACTATCCCTCTaGAGGGAACAGACACTCTAC +
Preference number: 4 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNSSLSL*REQTLY
Trigger: GTAGAGTGTCTGTTCCCTGCAGAGGGATAGTGAGGA...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACGCCGCGTGGTCAGCGTaGCGAACCTCGCCTCCTATG +
Preference number: 4 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDAAWSA*RTSPPM
Trigger: CATAGGAGGCGAGGTTCGGCACGCTGACCACGCGGC...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCTCAAAGTTGAAAGCCTaGAGCCTGTGGGCAGACCTA +
Preference number: 4 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFSKLKA*SLWADL
Trigger: TAGGTCTGCCCACAGGCTTCAGGCTTTCAACTTTGA...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGGATTCACCCAGTCAATaGCTGCACACCACATACCTG +
Preference number: 4 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLDSPSQ*LHTTYL
Trigger: CAGGTATGTGGTGTGCAGCCATTGACTGGGTGAATC...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTGCGCCTGGAGCTGCCTaGAGAAGCGAAGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: FILSWPESNFGVGIQRLFAPGAA*RSEAWP
Trigger: GGGCCAAGCTTCGCTTCTTCAGGCAGCTCCAGGCGC...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR TCA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGGCGCCTGGAGCTGCCTaGAGAAGCGAAGCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: IKWFILSWPESNFGVGIQAPGAA*RSEAWP
Trigger: GGGCCAAGCTTCGCTTCTTCAGGCAGCTCCAGGCGC...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR TCA 90 bp AGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCAGTACCAGAGCAGTGCGGAATGTCAAATGGCTaGAAAGGTCACCCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SRSLFQDIILHSPVPEQCGMSNG*KGHPPA
Trigger: AGCTGGTGGGTGACCTTTTCAGCCATTTGACATTCC...GCACTGCTCTGGTACTGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCATGTCATGGCCAGGCTaGTGGAAGCGCCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSMSWPG*WKRPSR
Trigger: TCTGCTTGGGCGCTTCCATCAGCCTGGCCATGACAT...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGAGAAATGCCTGTATTTaGACAAGTTGGGTCTATTCA +
Preference number: 4 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWRNACI*TSWVYS
Trigger: TGAATAGACCCAACTTGTTCAAATACAGGCATTTCT...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CTAAGGTCAAGCACCAAGCCAGACCAGAACGTACCCCTGGACAATCACAGCAGGTCTGGATTCTGCAGATaGGGCTGGCAAATTAAATGG +
Preference number: 4 (lower is better)
Translates to: LRSSTKPDQNVPLDNHSRSGFCR*GWQIKW
Trigger: CCATTTAATTTGCCAGCCTCATCTGCAGAATCCAGA...CCTGCTGTGATTGTCCAGGGGTACGTTCTGGTCTGGCTTGGTGCTTGACCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTGGCTGTTCACGGTGCTaGCCTTGCTCTCAGTCCACA +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFGCSRC*PCSQST
Trigger: TGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCC...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CTAAGGTCAAGCACCAAGCCAGACCAGAACGTACCCCTGGACAATCACAGCAGGTCTGGCCTGGAGGTCTaGATTCAAATTACAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LRSSTKPDQNVPLDNHSRSGLEV*IQITVF
Trigger: GAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGA...CCTGCTGTGATTGTCCAGGGGTACGTTCTGGTCTGGCTTGGTGCTTGACCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCAGTACCAGAGCAGTGCGAGATCAAAGTCCTGTaGCCTGGGGATGCAACTGAA +
Preference number: 4 (lower is better)
Translates to: SRSLFQDIILHSPVPEQCEIKVL*PGDATE
Trigger: TTCAGTTGCATCCCCAGGGCACAGGACTTTGATCTC...GCACTGCTCTGGTACTGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTGCCATCTCAGCTCACTaGAACCTCGGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSAISAH*NLGLPG
Trigger: ACCCGGGAGGCCGAGGTTGCAGTGAGCTGAGATGGC...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACCCAGCACTTGCCTGTaGGACCCCGTTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: KWFILSWPESNFGVGIQRPSTCL*DPVVPL
Trigger: CAGTGGCACAACGGGGTCCCACAGGCAAGTGCTGGG...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCAGTACCAGAGCAGTGCGCTGTCCTGAAGATGTaGGTAGGTTTATCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRSLFQDIILHSPVPEQCAVLKM*VGLSVE
Trigger: CTCCACAGATAAACCTACTCACATCTTCAGGACAGC...GCACTGCTCTGGTACTGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTCTCCACTGTGCTTGGTaGCAGCCAGGACCAGCATGC +
Preference number: 4 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSLHCAW*QPGPAC
Trigger: GCATGCTGGTCCTGGCTGTCACCAAGCACAGTGGAG...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCTATTTTATCATGGCCTaGGAGCAACTTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFYFIMA*EQLWGW
Trigger: CCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATA...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CCCCTGGACAATCACAGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCATCCTTAAACTCAGCATaGTCCCTGGGCAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLDNHSRSLFQDIILHSPSLNSA*SLGKEK
Trigger: TTTCTCCTTGCCCAGGGATCATGCTGAGTTTAAGGA...TGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCTGTGATTGTCCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGCAGCCAGGACCAGCATaGCCTGGGCAGGAACATGGC +
Preference number: 4 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWQPGPA*PGQEHG
Trigger: GCCATGTTCCTGCCCAGGGCATGCTGGTCCTGGCTG...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATCCAAGTTCGAACTCCTaGATTCCAACCAGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNPSSNS*IPTSLG
Trigger: ACCCAGGCTGGTTGGAATGCAGGAGTTCGAACTTGG...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGGGGAACTTGAGAAGATaGCTTGTGATTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLGNLRR*LVIFSL
Trigger: CAGGGAGAAAATCACAAGCCATCTTCTCAAGTTCCC...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATGGAACCACAGGTGGGTaGGCTGTTATCAACACACTG +
Preference number: 4 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNGTTGG*AVINTL
Trigger: CAGTGTGTTGATAACAGCCCACCCACCTGTGGTTCC...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGAAGGCTACCTGATGGCTaGGTGGGCCTTTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KWFILSWPESNFGVGIQRRLPDG*VGLSPA
Trigger: TGCTGGGGAAAGGCCCACCCAGCCATCAGGTAGCCT...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTGCAACGTCCACCTCCTaGGTTCAAGCGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFATSTS*VQAILL
Trigger: CAGGAGAATCGCTTGAACCCAGGAGGTGGACGTTGC...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTTGTAGGTCTGACAGGTaGGCCAAGGAACACCGGGGC +
Preference number: 4 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSCRSDR*AKEHRG
Trigger: GCCCCGGTGTTCCTTGGCCCACCTGTCAGACCTACA...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCTGCATGAATTCCCAGTaGGTTAAAGGAACCGCAATG +
Preference number: 4 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFCMNSQ*VKGTAM
Trigger: CATTGCGGTTCCTTTAACCCACTGGGAATTCATGCA...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp CCCCTGGACAATCACAGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCATATCCCCTGAACCTCTaGTCTTTGGGTTTGAGCCAT +
Preference number: 4 (lower is better)
Translates to: PLDNHSRSLFQDIILHSPYPLNL*SLGLSH
Trigger: ATGGCTCAAACCCAAAGACCAGAGGTTCAGGGGATA...TGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCTGTGATTGTCCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp CCCCTGGACAATCACAGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCATCATTCTTAGCTCTGTaGCCTTGGACAGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: PLDNHSRSLFQDIILHSPSFLAL*PWTGHL
Trigger: CAAGTGACCTGTCCAAGGCCACAGAGCTAAGAATGA...TGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCTGTGATTGTCCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp CTAAGGTCAAGCACCAAGCCAGACCAGAACGTACCCCTGGACAATCACAGCAGGAAAGAACTTTCTGAGTaGCGATCTGAGTTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LRSSTKPDQNVPLDNHSRKELSE*RSEFQD
Trigger: ATCCTGGAACTCAGATCGCCACTCAGAAAGTTCTTT...CCTGCTGTGATTGTCCAGGGGTACGTTCTGGTCTGGCTTGGTGCTTGACCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATCAACATGATCACTTGTaGAGGTCTCTAGATTATCTG +
Preference number: 4 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNQHDHL*RSLDYL
Trigger: CAGATAATCTAGAGACCTTCACAAGTGATCATGTTG...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCAGCCCACAGGCAATCTaGATCTTGGAGCCTGACAAG +
Preference number: 4 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSSPQAI*ILEPDK
Trigger: CTTGTCAGGCTCCAAGATGCAGATTGCCTGTGGGCT...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp CCCCTGGACAATCACAGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCATTCTTCAGAAATGGGTaGCTGCTACGTGTCCTTACA +
Preference number: 4 (lower is better)
Translates to: PLDNHSRSLFQDIILHSPFFRNG*LLRVLT
Trigger: TGTAAGGACACGTAGCAGGCACCCATTTCTGAAGAA...TGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCTGTGATTGTCCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGCCCAAGCCCCAGCTGTaGCCGGACCTACAAACCCAA +
Preference number: 4 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWPKPQL*PDLQTQ
Trigger: TTGGGTTTGTAGGTCCGGCCACAGCTGGGGCTTGGG...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp TCTGTGGAGAGAGATAGCCCACAGGCAATCTGCATCTaGGAGCCTGACAAGGAAGCTAAGCAGTATTCAAGA +
Preference number: 4 (lower is better)
Translates to: SVERDSPQAICI*EPDKEAKQYSR
Trigger: TCTTGAATACTGCTTAGCTTCCTTGTCAGGCTCCAAGATGCAGATTGCCTGTGGGCTATCTCTCTCCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp GTCCTTGTGTGCAGTACTCCTCTTATCTTCCACAGTTaGACTCCTCCCATTCCCCTCCACAGGGATATTTTC +
Preference number: 4 (lower is better)
Translates to: VLVCSTPLIFHS*TPPIPLHRDIF
Trigger: GAAAATATCCCTGTGGAGGGGAATGGGAGGAGTCAAACTGTGGAAGATAAGAGGAGTACTGCACACAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATACTGAAAACAGTGACTaGCCCATTAAACAGATTCAT +
Preference number: 4 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNTENSD*PIKQIH
Trigger: ATGAATCTGTTTAATGGGTCAGTCACTGTTTTCAGT...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGGCGGACAGATCACTTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRGGQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAAGTGATCTGTCCGCC...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCCTGGTCATGAACTCCTaGCCTCAAAGTGATCCTCCA +
Preference number: 4 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSLVMNS*PQSDPP
Trigger: TGGAGGATCACTTTGAGGTCAGGAGTTCATGACCAG...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGAGGCAGAGGTTGCAGTaGGCCAAGTTCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: ELEKMACDFLPEKVSSSERQRLQ*AKFELL
Trigger: CAGGAGTTCGAACTTGGCTCACTGCAACCTCTGCCT...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTTGAGTCCAGGAATTTaGGACCAGCCTGGCCAATAT +
Preference number: 4 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNLSPGI*DQPGQY
Trigger: ATATTGGCCAGGCTGGTCTCAAATTCCTGGACTCAA...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGGAGGCTGAGGCACAATaGTCGCTTGAACGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWEAEAQ*SLERRR
Trigger: CCTCCTGCGTTCAAGCGATCATTGTGCCTCAGCCTC...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACATGCAACTGAATGGGTaGTGGGAGGCTTCAGGGATC +
Preference number: 4 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDMQLNG*WEASGI
Trigger: GATCCCTGAAGCCTCCCAGCACCCATTCAGTTGCAT...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCACTCACTTCAAATCCTaGTTCTGCCAAAGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFTHFKS*FCQRLK
Trigger: CTTTAACCTTTGGCAGAAGCAGGATTTGAAGTGAGT...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACACAGGAAGGAATGTGTaGCCAACCTCACGCATCAGC +
Preference number: 4 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDTGRNV*PTSRIS
Trigger: GCTGATGCGTGAGGTTGGCCACACATTCCTTCCTGT...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTTACCAGAGCAGTGCTTaGCAGAGGGCATTCCACAGG +
Preference number: 4 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSYQSSA*QRAFHR
Trigger: CCTGTGGAATGCCCTCTGCCAAGCACTGCTCTGGTA...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR CCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGCCCTGGAACCACAGGTaGGTGGGCTGTTATCAACAC +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRPWNHR*VGCYQH
Trigger: GTGTTGATAACAGCCCACCCACCTGTGGTTCCAGGG...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTGGGAGGAATGTCAAATaGCTGAAAAGGTCACCCACC +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFGRNVK*LKRSPT
Trigger: GGTGGGTGACCTTTTCAGCCATTTGACATTCCTCCC...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCAGTACCAGAGCAGTGCACTCAGCATGATCCCTaGGCAAGGAGAAAATTTTAC +
Preference number: 4 (lower is better)
Translates to: SRSLFQDIILHSPVPEQCTQHDP*ARRKFY
Trigger: GTAAAATTTTCTCCTTGCCCAGGGATCATGCTGAGT...GCACTGCTCTGGTACTGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTCGTGTCCTTACATGGTaGAAGAGGCAAGAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSRVLTW*KRQERL
Trigger: GAGGCGCTCTTGCCTCTTCCACCATGTAAGGACACG...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCAGTACCAGAGCAGTGCCTTTCCCTGAAAAGATaGTGGGTATTAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRSLFQDIILHSPVPEQCLSLKR*WVLSCF
Trigger: GAAGCAGCTTAATACCCACCATCTTTTCAGGGAAAG...GCACTGCTCTGGTACTGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGAACAGAAAAAGAAGGTaGAGGACGTGCCCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: ELEKMACDFLPEKVSSSENRKRR*RTCPAA
Trigger: CGCGGCTGGGCACGTCCTCCACCTTCTTTTTCTGTT...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTCTGTTATCAACACACTaGCCAGGGAAGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSLLSTH*PGKRGV
Trigger: CACACCCCTCTTCCCTGGTCAGTGTGTTGATAACAG...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ATTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGTTGGGCAGTGAGTaGGCCAGTCCCCAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IIKWFILSWPESNFGVGIQLGSE*ASPQAS
Trigger: TGAGGCTTGGGGACTGGCTCACTCACTGCCCAACTG...AATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTCTCCTGACCTCAAAGTaGTCCTCCAAGATAACGACA +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFLLTSK*SSKITT
Trigger: TGTCGTTATCTTGGAGGATCACTTTGAGGTCAGGAG...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTACCTTTCCCCAGCACTTaGCTGTGGGACCCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLPFPST*LWDPVV
Trigger: CACAACGGGGTCCCACAGGCAAGTGCTGGGGAAAGG...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTATGCCTCAGCCTCCTGTaGCTGGCCTCAGACTGCTCA +
Preference number: 4 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLCLSLL*LASDCS
Trigger: TGAGCAGTCTGAGGCCAGGCACAGGAGGCTGAGGCA...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ATGAATTTTGGAAGGGACATCAACATTCAGGACATAGCAGTGAACCCTGTAGGAACCAGAACGTACCCCTaGACAATCACAGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: MNFGRDINIQDIAVNPVGTRTYP*TITAGV
Trigger: GACTCCTGCTGTGATTGTCCAGGGGTACGTTCTGGT...TCCTACAGGGTTCACTGCTATGTCCTGAATGTTGATGTCCCTTCCAAAATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGAAAAGGCCTTCTTGGTaGAACTTTCTACCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLKRPSW*NFLPFK
Trigger: TTTGAAAGGTAGAAAGTTCCACCAAGAAGGCCTTTT...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp TATCCCCTGAACCTCTGGTCTTTGGGTTTGAGCCATTaGCCTCATGGTGTGTTGCTTCTTCACTGCATGAAT +
Preference number: 4 (lower is better)
Translates to: YPLNLWSLGLSH*PHGVLLLHCMN
Trigger: ATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAGGTTCAGGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp CAAATTACAGTCTTCCTCATTCTTAGCTCTGTGGCCTaGGACAGGTCACTTGACCTCTCCAGGTCTCCATAT +
Preference number: 4 (lower is better)
Translates to: QITVFLILSSVA*DRSLDLSRSPY
Trigger: ATATGGAGACCTGGAGAGGTCAAGTGACCTGTCCAAGGCCACAGAGCTAAGAATGAGGAAGACTGTAATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ATTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTAACACACAGGCTACCTaGTGGCTGGGTGGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: IIKWFILSWPESNFGVGINTQAT*WLGGPF
Trigger: GAAAGGCCCACCCAGCCATCAGGTAGCCTGTGTGTT...AATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTTATTTTATCATGGCCTaGGAGCAACTTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFYFIMA*EQLWGW
Trigger: CCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATA...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR TCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATCTTTCTTGCTGCAGGTaGCTGAAAAGATCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNLSCCR*LKRSFS
Trigger: ACTGAAAGATCTTTTCAGTCACCTGCAGCAAGAAAG...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTATCGTACATAGGTTTTaGCTCCTTTCTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFIVHRF*LLSCCR
Trigger: CCTGCAGCAAGAAAGGAGTCAAAACCTATGTACGAT...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGCCTCCACCCCCAGGATaGAGTACTGTGTGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRPPPPG*STVCLF
Trigger: AAACAAACACACAGTACTGCATCCTGGGGGTGGAGG...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGATCAGGCACATGAGTaGATGTCAGTCCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRDQAHE*MSVHVG
Trigger: TCCCACATGGACTGACATCCACTCATGTGCCTGATC...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp TTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTAAGCAGATATGGAGTCTaGGGAGGGCCCATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFYHGLRATLGLAFRDCLSRYGV*GGPILQ
Trigger: CTGAAGAATGGGCCCTCCCCAGACTCCATATCTGCT...TAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGTTAAAGGAACCGCAATaGCTGTTCACGGTGCTGACC +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRLKEPQ*LFTVLT
Trigger: GGTCAGCACCGTGAACAGCCATTGCGGTTCCTTTAA...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGGTTATACAAAAGGTaGACTCCATCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ELEKMACDFLPEKVSSSEGLYKR*TPSGLE
Trigger: CTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCC...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ATTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCTACATCACCCAGCTTaGACCCAAGCCCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: IIKWFILSWPESNFGVGILHHPA*TQAPAV
Trigger: CACAGCTGGGGCTTGGGTCCAAGCTGGGTGATGTAG...AATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp TTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTaGTCTTACCTTCTGACAGAGCAATGTGATTTGACA +
Preference number: 4 (lower is better)
Translates to: FTVLTLLSVHTD*SYLLTEQCDLT
Trigger: TGTCAAATCACATTGCTCTGTCAGAAGGTAAGACAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp TGGTCTTTGGGTTTGAGCCATTTGCCTCATGGTGTGTaGCTTCTTCACTGCATGAATTCCCAGTGGGTTAAA +
Preference number: 4 (lower is better)
Translates to: WSLGLSHLPHGV*LLHCMNSQWVK
Trigger: TTTAACCCACTGGGAATTCATGCAGTGAAGAAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTAGTGTTGTCAGCTTCTaGATGTCAGGGACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: FILSWPESNFGVGIQRLFSVVSF*MSGTGG
Trigger: ACCACCTGTCCCTGACATTCAGAAGCTGACAACACT...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR TCA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGTGTTGTCAGCTTCTaGATGTCAGGGACAGGTGGT +
Preference number: 4 (lower is better)
Translates to: IKWFILSWPESNFGVGIQSVVSF*MSGTGG
Trigger: ACCACCTGTCCCTGACATTCAGAAGCTGACAACACT...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR TCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGTTATCTTCCACAGTTTaGCTCCTCCCATTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWLSSTV*LLPFPS
Trigger: GGAGGGGAATGGGAGGAGTCAAACTGTGGAAGATAA...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTGCTCTCAGTCCACACTaGTTTGTCTTACCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSALSPH*FVLPSD
Trigger: GTCAGAAGGTAAGACAAATCAGTGTGGACTGAGAGC...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGATTCACTCGATTGGATaGTGTCAGAATGGGGGCACT +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRIHSIG*CQNGGT
Trigger: AGTGCCCCCATTCTGACAGCATCCAATCGAGTGAAT...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTCCCAGGCTGCACTTTaGATTTCTGTCCTTAAACTC +
Preference number: 4 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDSQAAL*ISVLKL
Trigger: GAGTTTAAGGACAGAAATGCAAAGTGCAGCCTGGGA...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTACAGATGCAAAAACTaGCACAAGGTTTGGGGGATG +
Preference number: 4 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDYRCKN*HKVWGM
Trigger: CATCCCCCAAACCTTGTGGCAGTTTTTGCATCTGTA...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCCAACCAGTCTACAGATaGAAAAACTGCCACAAGGTT +
Preference number: 4 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSQPVYR*KNCHKV
Trigger: AACCTTGTGGCAGTTTTTGCATCTGTAGACTGGTTG...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGAACCTCGCCTCCTATaGAAAGAACTTTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQREPRLL*KELSEW
Trigger: CCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTC...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGAGGCAATCTGCATCTTaGAGCCTGACAAGGAAGCTA +
Preference number: 4 (lower is better)
Translates to: ELEKMACDFLPEKVSSSERQSAS*SLTRKL
Trigger: TAGCTTCCTTGTCAGGCTCCAAGATGCAGATTGCCT...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGAGGCAGAGGTTCTTCTaGGAGGAATGTCAAATGGCT +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRRQRFF*EECQMA
Trigger: AGCCATTTGACATTCCTCCCAGAAGAACCTCTGCCT...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTAACTGCTTAAACCTCTaGGAGGCAGAGGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSNCLNL*EAEVLL
Trigger: CAGAAGAACCTCTGCCTCCCAGAGGTTTAAGCAGTT...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGGAGGATTCACTCGATTaGATGCTGTCAGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: IKWFILSWPESNFGVGIQEDSLD*MLSEWG
Trigger: CCCCCATTCTGACAGCATCCAATCGAGTGAATCCTC...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ATTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTTTCAGTCTTTGGTGCTaGCCCAGAAGGTGGCCCACA +
Preference number: 4 (lower is better)
Translates to: IIKWFILSWPESNFGVGIFSLWC*PRRWPT
Trigger: TGTGGGCCACCTTCTGGGCCAGCACCAAAGACTGAA...AATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTTCCCTGAAAAGATGGTaGGTATTAAGCTGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFSLKRW*VLSCFL
Trigger: CAAGAAGCAGCTTAATACCCACCATCTTTTCAGGGA...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTTTAGCTCTGTGGCCTTaGACAGGTCACTTGACCTCT +
Preference number: 4 (lower is better)
Translates to: FILSWPESNFGVGIQRLFLALWP*TGHLTS
Trigger: AGAGGTCAAGTGACCTGTCCAAGGCCACAGAGCTAA...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp TTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTACCCAGTAAGATGTGTTaGCTTCAGAGGTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LFYHGLRATLGLAFRDCLPSKMC*LQRCRD
Trigger: ATCCCTGCACCTCTGAAGCCAACACATCTTACTGGG...TAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503945.2
3UTR CAA 72 bp GCCAAAGCCCACCAGAAATGCCTGTATTTGAACAAGTaGGGTCTATTCATCACAGAGAACCATAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: AKAHQKCLYLNK*GLFITENHRTS
Trigger: AGAAGTCCTATGGTTCTCTGTGATGAATAGACCCAACTTGTTCAAATACAGGCATTTCTGGTGGGCTTTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGCTGAAGACAACAAAATaGGTCAAGGCACAAAGCCAC +
Preference number: 4 (lower is better)
Translates to: ELEKMACDFLPEKVSSSELKTTK*VKAQSH
Trigger: GTGGCTTTGTGCCTTGACTCATTTTGTTGTCTTCAG...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGATGTTTGTTTCAAAGTTaGAAGCCTGAAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KWFILSWPESNFGVGIQRCLFQS*KPEACG
Trigger: CCCACAGGCTTCAGGCTTTCAACTTTGAAACAAACA...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCTTCCTGCAGCAAAACTaGAAGGAATACTATCTGTTC +
Preference number: 4 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSFLQQN*KEYYLF
Trigger: GAACAGATAGTATTCCTTTCAGTTTTGCTGCAGGAA...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACCTTGCTGCAGGTGACTaGAAAGATCTTTCAGTCTTA +
Preference number: 4 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDLAAGD*KDLSVL
Trigger: TAAGACTGAAAGATCTTTTCAGTCACCTGCAGCAAG...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGTGCTTCTTCACTGCATaGATTCCCAGTGGGTTAAAG +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRCFFTA*IPSGLK
Trigger: CTTTAACCCACTGGGAATTCATGCAGTGAAGAAGCA...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGACCATAGTGCCAACATaGTCACTTGTGAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ELEKMACDFLPEKVSSSETIVPT*SLVKVS
Trigger: AGAGACCTTCACAAGTGATCATGTTGGCACTATGGT...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCACATCTCCTTTAATCTaGAGAAGTAATCCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSTSPLI*RSNPGE
Trigger: TTCCCCAGGATTACTTCTGCAGATTAAAGGAGATGT...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCAAAGCCCACCAGAAATaGCTGTATTTGAACAAGTTG +
Preference number: 4 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSKAHQK*LYLNKL
Trigger: CAACTTGTTCAAATACAGGCATTTCTGGTGGGCTTT...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACGAGCAACTTTGGGGTTaGCATTCAGAGACTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDEQLWG*HSETVY
Trigger: ATAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTC...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR CCA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATCAGCAGAAGGATGTTTaGTATTTTGTGAGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNQQKDV*YFVSGK
Trigger: TTTACCACTCACAAAATACCAAACATCCTTCTGCTG...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGGAAAACCCAGCTACTTaGAAGTCTGAGGTAGGACAG +
Preference number: 4 (lower is better)
Translates to: IKWFILSWPESNFGVGIQENPAT*KSEVGQ
Trigger: CTGTCCTACCTCAGACTTCCAAGTAGCTGGGTTTTC...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGTCTCCGCACCAGGAATaGTTCACCAAGTACTTTTCT +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRSPHQE*FTKYFS
Trigger: AGAAAAGTACTTGGTGAACCATTCCTGGTGCGGAGA...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTACAGCACTTTGGGAGATaGAGGTGGGTGGATCACCTA +
Preference number: 4 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLQHFGR*RWVDHL
Trigger: TAGGTGATCCACCCACCTCCATCTCCCAAAGTGCTG...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp GGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTaGGCATTCAGAGACTGTTTATGTCCAACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GLFYHGLRATLG*AFRDCLCPTGE
Trigger: TTCTCCTGTTGGACATAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
3UTR CAA 72 bp ATATATATATATCCCCTGAACCTCTGGTCTTTGGGTTaGAGCCATTTGCCTCATGGTGTGTTGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: IYIYPLNLWSLG*SHLPHGVLLLH
Trigger: GTGAAGAAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAGGTTCAGGGGATATATATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGAAAACCTTACCCAATaGGAGCCAGAAATCTCCATT +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRENLTQ*EPEISI
Trigger: AATGGAGATTTCTGGCTCTCATTGGGTAAGGTTTTC...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTAAGGGTGAAGCCCTCATaGCTCCATTGCTTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLRVKPS*LHCFPK
Trigger: TTTTGGGAAGCAATGGAGTCATGAGGGCTTCACCCT...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGAATCCGATTGAAGGAATaGACTAACACCAACCAACCA +
Preference number: 4 (lower is better)
Translates to: KWFILSWPESNFGVGIQRIRLKE*TNTNQP
Trigger: TGGTTGGTTGGTGTTAGTTCATTCCTTCAATCGGAT...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGCTTCTGTTTTCCAAATaGGGATTAGGTACTCCCTCC +
Preference number: 4 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWLLFSK*GLGTPS
Trigger: GGAGGGAGTACCTAATCCTCATTTGGAAAACAGAAG...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTGATGCAATTCCAAAATaGACATCTAACCTCAATAGG +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFDAIPK*TSNLNR
Trigger: CCTATTGAGGTTAGATGTGCATTTTGGAATTGCATC...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp TTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTAGGGAACTTGAGAAGATaGCTTGTGATTTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LFYHGLRATLGLAFRDCLGNLRR*LVIFSL
Trigger: CAGGGAGAAAATCACAAGCCATCTTCTCAAGTTCCC...TAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
3UTR CAA 72 bp TGCTTCTGCCAAAGGTTAAAGACTAACCTCTTGACTTaGGGCAAATCACTTAACCCACCTAAATCCCATACT +
Preference number: 4 (lower is better)
Translates to: CFCQRLKTNLLT*GKSLNPPKSHT
Trigger: AGTATGGGATTTAGGTGGGTTAAGTGATTTGCCCAAAGTCAAGAGGTTAGTCTTTAACCTTTGGCAGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp AAATCCTGCTTCTGCCAAAGGTTAAAGACTAACCTCTaGACTTTGGGCAAATCACTTAACCCACCTAAATCC +
Preference number: 4 (lower is better)
Translates to: KSCFCQRLKTNL*TLGKSLNPPKS
Trigger: GGATTTAGGTGGGTTAAGTGATTTGCCCAAAGTCAAGAGGTTAGTCTTTAACCTTTGGCAGAAGCAGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp GCCCCATCCTTTACAATTTGTTTCCCACTACTAATGTaGGCCAGTCCCATTTGGGTGTTTTTGAAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: APSFTICFPLLM*ASPIWVFLKSK
Trigger: TTTACTCTTCAAAAACACCCAAATGGGACTGGCCAACATTAGTAGTGGGAAACAAATTGTAAAGGATGGGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGAATATGCCTTGGGTATTaGAGTAAGGCATTTAAGGAC +
Preference number: 4 (lower is better)
Translates to: KWFILSWPESNFGVGIQRICLGY*SKAFKD
Trigger: GTCCTTAAATGCCTTACTTCAATACCCAAGGCATAT...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp ATGAATTTTGGAAGGGACATCAACATTCAGGACATAGCAGTGAACCCTGTAGGAATGTTAGCGTATCACTaGTCCCACTATATCCTTCTA +
Preference number: 4 (lower is better)
Translates to: MNFGRDINIQDIAVNPVGMLAYH*SHYILL
Trigger: TAGAAGGATATAGTGGGAGCAGTGATACGCTAACAT...TCCTACAGGGTTCACTGCTATGTCCTGAATGTTGATGTCCCTTCCAAAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp TTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTAGAGCAACTTTGGGGTTaGCATTCAGAGACTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LFYHGLRATLGLAFRDCLEQLWG*HSETVY
Trigger: ATAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTC...TAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR CCA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCGATCTATTTCAAAAGTaGTTGTACTTGTCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSDLFQK*LYLSLG
Trigger: TCCTAAGGACAAGTACAACCACTTTTGAAATAGATC...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTTCATACTCCATTTTGTaGAACATCAGACTTTGTGAT +
Preference number: 4 (lower is better)
Translates to: QRAFHRFLGELEKMACDFSYSIL*NIRLCD
Trigger: ATCACAAAGTCTGATGTTCCACAAAATGGAGTATGA...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGTTGGCCAGTCCCATTTaGGTGTTTTTGAAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: ELEKMACDFLPEKVSSSELASPI*VFLKSK
Trigger: TTTACTCTTCAAAAACACCCAAATGGGACTGGCCAA...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGATTCTTTCTAGCACCTaGTACCAAATTCCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: IKWFILSWPESNFGVGIQILSST*YQIPEG
Trigger: GCCTTCTGGAATTTGGTACCAGGTGCTAGAAAGAAT...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGTGGTGGGTATTAAGCTaGTTCTTGCATAGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRWWVLS*FLHSFQ
Trigger: TTGAAAACTATGCAAGAAGCAGCTTAATACCCACCA...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACAAGACTACATACAGGTaGTTCTATTTTTGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDKTTYR*FYFCVL
Trigger: CAACACACAAAAATAGAACCACCTGTATGTAGTCTT...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTACAAACCTACCAGAAATaGATGGTAGCATGCTTGGAC +
Preference number: 4 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLQTYQK*MVACLD
Trigger: GTCCAAGCATGCTACCATCCATTTCTGGTAGGTTTG...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTCTGAAAACTTCAGCATaGGTTATACAAAAGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FILSWPESNFGVGIQRLFLKTSA*VIQKVD
Trigger: GTCCACCTTTTGTATAACCCATGCTGAAGTTTTCAG...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp TTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTaGGGGTTGGCATTCAGAGACTGTTTATGTCCAACA +
Preference number: 4 (lower is better)
Translates to: LSGLFYHGLRAT*GLAFRDCLCPT
Trigger: TGTTGGACATAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
3UTR CAA 72 bp TGCTTTCAAAAAGACTACATACAGGTGGTTCTATTTTaGTGTGTTGAAACACTTTCCCAGGCTGCACTTTGC +
Preference number: 4 (lower is better)
Translates to: CFQKDYIQVVLF*CVETLSQAALC
Trigger: GCAAAGTGCAGCCTGGGAAAGTGTTTCAACACACAAAAATAGAACCACCTGTATGTAGTCTTTTTGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ATTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTAAAACTCCCATCTCCTaGTTCTCAGGCTACTATACT +
Preference number: 4 (lower is better)
Translates to: IIKWFILSWPESNFGVGIKTPIS*FSGYYT
Trigger: AGTATAGTAGCCTGAGAATCAGGAGATGGGAGTTTT...AATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp TTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTACCCAACATTTGTGATTaGGGCTACTTGGTTAATTTT +
Preference number: 4 (lower is better)
Translates to: LFYHGLRATLGLAFRDCLPNICD*GYLVNF
Trigger: AAAATTAACCAAGTAGCCTCAATCACAAATGTTGGG...TAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGTTAGGTTCCAACATATaGATTTTGGAAGGGACATCA +
Preference number: 4 (lower is better)
Translates to: IKWFILSWPESNFGVGIQLGSNI*ILEGTS
Trigger: TGATGTCCCTTCCAAAATTCATATGTTGGAACCTAA...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGAACCAAACAATGGTaGACCTTCTGTTTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: IKWFILSWPESNFGVGIQRTKQW*TFCFPN
Trigger: ATTTGGAAAACAGAAGGTTCACCATTGTTTGGTTCT...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR TCA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTTCTCCGATACAATTTTaGTTGGGTGAGCATTATTTG +
Preference number: 4 (lower is better)
Translates to: FILSWPESNFGVGIQRLFSPIQF*LGEHYL
Trigger: CAAATAATGCTCACCCAATCAAAATTGTATCGGAGA...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp ATGAATTTTGGAAGGGACATCAACATTCAGGACATAGCAGTGAACCCTGTAGGAGAGTTAATATGTTCCTaGAGCAAAACTGAAAGGAAT +
Preference number: 4 (lower is better)
Translates to: MNFGRDINIQDIAVNPVGELICS*SKTERN
Trigger: ATTCCTTTCAGTTTTGCTGCAGGAACATATTAACTC...TCCTACAGGGTTCACTGCTATGTCCTGAATGTTGATGTCCCTTCCAAAATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGTTAGTTCGTTCAGGCTaGTCTAACAAAATATCTTAC +
Preference number: 4 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRLVRSG*SNKISY
Trigger: GTAAGATATTTTGTTAGAGCAGCCTGAACGAACTAA...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp TGGACTGAATACTTTCACTTCCTTGGTCTAAGACAAGCAGCAGATTATAGATGGGTGATTGAGGCTACTTaGTTAATTTTTCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: WTEYFHFLGLRQAADYRWVIEAT*LIFLQD
Trigger: ATCCTGGAGAAAAATTAACCAAGTAGCCTCAATCAC...CCATCTATAATCTGCTGCTTGTCTTAGACCAAGGAAGTGAAAGTATTCAGTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACCAACATATGAATTTTaGAAGGGACATCAACATTCA +
Preference number: 4 (lower is better)
Translates to: KWFILSWPESNFGVGIQRPTYEF*KGHQHS
Trigger: TGAATGTTGATGTCCCTTCCAAAATTCATATGTTGG...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
3UTR CAA 72 bp AAAAATATATATATATATCCCCTGAACCTCTGGTCTTaGGGTTTGAGCCATTTGCCTCATGGTGTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: KNIYIYPLNLWS*GLSHLPHGVLL
Trigger: AAGCAACACACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAGGTTCAGGGGATATATATATATATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CCA 90 bp ATTATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTGGCTGGCAAATTAAATaGAACTATGATAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: IIKWFILSWPESNFGVGIGWQIK*NYDRDH
Trigger: ATGGTCCCTATCATAGTTCCATTTAATTTGCCAGCC...AATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR GCA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTATTCAAATCCTGCTTCTaGCAAAGGTTAAAGACTAAC +
Preference number: 4 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLFKSCF*QRLKTN
Trigger: GTTAGTCTTTAACCTTTGGCAGAAGCAGGATTTGAA...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AGGAGGCCTGTGTCGGGCAGAAATGGCCTAGCACCTGACCTCCACTGTGCTTGGCAGGCAATCTGCATCTaGGAGCCTGACAAGGAAGCT +
Preference number: 5 (lower is better)
Translates to: RRPVSGRNGLAPDLHCAWQAICI*EPDKEA
Trigger: AGCTTCCTTGTCAGGCTCCAAGATGCAGATTGCCTG...CCAAGCACAGTGGAGGTCAGGTGCTAGGCCATTTCTGCCCGACACAGGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATACTACATCACCCAGCTaGGACCCAAGCCCCAGCTGT +
Preference number: 5 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNTTSPS*DPSPSC
Trigger: ACAGCTGGGGCTTGGGTCCAAGCTGGGTGATGTAGT...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp GAACCGCAATGGCTGTTCACGGTGCTGACCTTGCTCTCAGTCCACACTGATTTGGTACCAGAGCAGTGCTaGGCAGAGGGCATTCCACAG +
Preference number: 5 (lower is better)
Translates to: EPQWLFTVLTLLSVHTDLVPEQC*AEGIPQ
Trigger: CTGTGGAATGCCCTCTGCCAAGCACTGCTCTGGTAC...CAAATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAACAGCCATTGCGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CCAGTCCCCAAGCCTCATCCTACTGCCTGCTCTCAGACCACATCCAGTCACAATCTTAGCTCTGTGGCCTaGGACAGGTCACTTGACCTC +
Preference number: 5 (lower is better)
Translates to: PVPKPHPTACSQTTSSHNLSSVA*DRSLDL
Trigger: GAGGTCAAGTGACCTGTCCAAGGCCACAGAGCTAAG...ATTGTGACTGGATGTGGTCTGAGAGCAGGCAGTAGGATGAGGCTTGGGGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCAGTACCAGAGCAGTGCTGTAATCCCAGCACTTaGGGAGATGGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: SRSLFQDIILHSPVPEQCCNPST*GDGGGW
Trigger: CCACCCACCTCCATCTCCCAAAGTGCTGGGATTACA...GCACTGCTCTGGTACTGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CCCCTGGACAATCACAGCAGGAGTCTCTTCCAAGACATAATACTCCACTCCCCACCTTGGACAGGTCACTaGACCTCTCCAGGTCTCCAT +
Preference number: 5 (lower is better)
Translates to: PLDNHSRSLFQDIILHSPPWTGH*TSPGLH
Trigger: ATGGAGACCTGGAGAGGTCAAGTGACCTGTCCAAGG...TGGGGAGTGGAGTATTATGTCTTGGAAGAGACTCCTGCTGTGATTGTCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGAGCCTGTGGGACCCCGTaGTGCCACTGCACTACAGCC +
Preference number: 5 (lower is better)
Translates to: KWFILSWPESNFGVGIQRACGTP*CHCTTA
Trigger: GGCTGTAGTGCAGTGGCACAACGGGGTCCCACAGGC...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCCTTGAAGCTGCTTTCTaGAAGGGAGGACTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFLEAAF*KGGLSS
Trigger: ACTGCTCAGTCCTCCCTTCAAGAAAGCAGCTTCAAG...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTGCCTTTCCCCAGCACTaGCCTGTGGGACCCCGTTGT +
Preference number: 5 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSAFPQH*PVGPRC
Trigger: ACAACGGGGTCCCACAGGCAAGTGCTGGGGAAAGGC...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CTAAGGTCAAGCACCAAGCCAGACCAGAACGTACCCCTGGACAATCACAGCAGGAGAGCAACTTTGGGGTaGGCATTCAGAGACTGTTTA +
Preference number: 5 (lower is better)
Translates to: LRSSTKPDQNVPLDNHSRRATLG*AFRDCL
Trigger: TAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCT...CCTGCTGTGATTGTCCAGGGGTACGTTCTGGTCTGGCTTGGTGCTTGACCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp ACTTCAGCATGGGTTATACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATGGATTCTGGCCCTGGTaGGGTGATTTCAAGGAAGTG +
Preference number: 5 (lower is better)
Translates to: TSAWVIQKVDSIWPGGLNGFWPW*GDFKEV
Trigger: CACTTCCTTGAAATCACCCAACCAGGGCCAGAATCC...ATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGTATAACCCATGCTGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCGTTTTGACTCCTTTCTaGCTGCAGGTGACTGAAAAG +
Preference number: 5 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFVLTPF*LQVTEK
Trigger: CTTTTCAGTCACCTGCAGCAAGAAAGGAGTCAAAAC...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCTCAGTCCACACTGATTaGTCTTACCTTCTGACAGAG +
Preference number: 5 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFSVHTD*SYLLTE
Trigger: CTCTGTCAGAAGGTAAGACAAATCAGTGTGGACTGA...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CGTGCCGAACCTCGCCTCCTATGCAAAGAACTTTCTGAGTGGCGATCTGAGTTCACACCTGAAGAATACTaGCTACATTCTAGCACCCTT +
Preference number: 5 (lower is better)
Translates to: RAEPRLLCKELSEWRSEFTPEEY*LHSSTL
Trigger: AAGGGTGCTAGAATGTAGCAAGTATTCTTCAGGTGT...GAACTCAGATCGCCACTCAGAAAGTTCTTTGCATAGGAGGCGAGGTTCGGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGCCCTCATGACTCCATaGCTTCCCAAAAGCCCCACC +
Preference number: 5 (lower is better)
Translates to: ELEKMACDFLPEKVSSSEALMTP*LPKSPT
Trigger: GGTGGGGCTTTTGGGAAGCAATGGAGTCATGAGGGC...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGATGTCGGCGGGCTTTTaGTGCTGCACGTTGATGTCC +
Preference number: 5 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRMSAGF*CCTLMS
Trigger: GGACATCAACGTGCAGCACAAAAAGCCCGCCGACAT...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR CAA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGGTACCAGAGCAGTGCTaGGCAGAGGGCATTCCACAG +
Preference number: 5 (lower is better)
Translates to: IKWFILSWPESNFGVGIQVPEQC*AEGIPQ
Trigger: CTGTGGAATGCCCTCTGCCAAGCACTGCTCTGGTAC...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR CAA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACACCAGGTTAGCAACCTaGAGGTCATACCACATGAGC +
Preference number: 5 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDTRLAT*RSYHMS
Trigger: GCTCATGTGGTATGACCTCAAGGTTGCTAACCTGGT...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAAACTGCCACAAGGTTaGGGGGATGTTGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: IKWFILSWPESNFGVGIQKLPQG*GDVGDR
Trigger: CCTGTCCCCAACATCCCCCAAACCTTGTGGCAGTTT...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp CAGAGGGCATTCCACAGGTTTCTAGGGGAACTTGAGAAGATGGCTTGTGATTTTAGAGCAACTTTGGGGTaGGCATTCAGAGACTGTTTA +
Preference number: 5 (lower is better)
Translates to: QRAFHRFLGELEKMACDFRATLG*AFRDCL
Trigger: TAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCT...AAAATCACAAGCCATCTTCTCAAGTTCCCCTAGAAACCTGTGGAATGCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000237380.12
ENST00000503945.2
CDS-3UTR CAA 90 bp TTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTATTCACGGTGCTGACCTaGCTCTCAGTCCACACTGAT +
Preference number: 5 (lower is better)
Translates to: LFYHGLRATLGLAFRDCLFTVLT*LSVHTD
Trigger: ATCAGTGTGGACTGAGAGCAAGGTCAGCACCGTGAA...TAAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTCTCTGGTCTTTGGGTTaGAGCCATTTGCCTCATGGT +
Preference number: 5 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSLWSLG*SHLPHG
Trigger: ACCATGAGGCAAATGGCTCAAACCCAAAGACCAGAG...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp ATGAATTTTGGAAGGGACATCAACATTCAGGACATAGCAGTGAACCCTGTAGGACTGAACCTCTGGTCTTaGGGTTTGAGCCATTTGCCT +
Preference number: 5 (lower is better)
Translates to: MNFGRDINIQDIAVNPVGLNLWS*GLSHLP
Trigger: AGGCAAATGGCTCAAACCCAAAGACCAGAGGTTCAG...TCCTACAGGGTTCACTGCTATGTCCTGAATGTTGATGTCCCTTCCAAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTCTTATCTTCCACAGTTaGACTCCTCCCATTCCCCTC +
Preference number: 5 (lower is better)
Translates to: FILSWPESNFGVGIQRLFLIFHS*TPPIPL
Trigger: GAGGGGAATGGGAGGAGTCAAACTGTGGAAGATAAG...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGCTTGAGTCCAGGAATTaGAGACCAGCCTGGCCAATA +
Preference number: 5 (lower is better)
Translates to: IKWFILSWPESNFGVGIQLESRN*RPAWPI
Trigger: TATTGGCCAGGCTGGTCTCAAATTCCTGGACTCAAG...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTTTCCCACTACTAATGTaGGCCAGTCCCATTTGGGTG +
Preference number: 5 (lower is better)
Translates to: FILSWPESNFGVGIQRLFFPLLM*ASPIWV
Trigger: CACCCAAATGGGACTGGCCAACATTAGTAGTGGGAA...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp GAACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGTACATTCTAGCACCCTaGCTGACTTCCCATTCAACA +
Preference number: 5 (lower is better)
Translates to: ELEKMACDFLPEKVSSSEYILAP*LTSHST
Trigger: TGTTGAATGGGAAGTCAGCAAGGGTGCTAGAATGTA...CTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AACTTGAGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGACTAACCTCTTGACTTaGGGCAAATCACTTAACCCA +
Preference number: 5 (lower is better)
Translates to: NLRRWLVIFSLKKLAAQRTNLLT*GKSLNP
Trigger: TGGGTTAAGTGATTTGCCCAAAGTCAAGAGGTTAGT...CCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCTCAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACCAGAAATGCCTGTATTaGAACAAGTTGGGTCTATTC +
Preference number: 5 (lower is better)
Translates to: SGLFYHGLRATLGLAFRDQKCLY*NKLGLF
Trigger: GAATAGACCCAACTTGTTCAAATACAGGCATTTCTG...GTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp ACAAAAGGTGGACTCCATCTGGCCTGGAGGTCTGAATTCAAATTACAGTCTTCCCCCATCCTTTACAATTaGTTTCCCACTACTAATGTT +
Preference number: 5 (lower is better)
Translates to: TKGGLHLAWRSEFKLQSSPILYN*FPTTNV
Trigger: AACATTAGTAGTGGGAAACAAATTGTAAAGGATGGG...GGAAGACTGTAATTTGAATTCAGACCTCCAGGCCAGATGGAGTCCACCTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGAAGTGGTAAACTGACCTaGAATTTTCTTTGTACGTGC +
Preference number: 5 (lower is better)
Translates to: KWFILSWPESNFGVGIQRSGKLT*NFLCTC
Trigger: GCACGTACAAAGAAAATTCAAGGTCAGTTTACCACT...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACAGGTGGTTCTATTTTaGTGTGTTGAAACACTTTCC +
Preference number: 5 (lower is better)
Translates to: KWFILSWPESNFGVGIQRQVVLF*CVETLS
Trigger: GGAAAGTGTTTCAACACACAAAAATAGAACCACCTG...TCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp GCCTTTAAAATTAAGATAATACAGCACCTATCTCATCAGACTGACGTGAGACTATTGGGTTTGAGCCATTaGCCTCATGGTGTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: AFKIKIIQHLSHQTDVRLLGLSH*PHGVLL
Trigger: AAGCAACACACCATGAGGCAAATGGCTCAAACCCAA...TAGTCTCACGTCAGTCTGATGAGATAGGTGCTGTATTATCTTAATTTTAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTACCTCTAAAAGGGCTTaGCAAGGATTAAGCAAGATA +
Preference number: 5 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSTSKRA*QGLSKI
Trigger: TATCTTGCTTAATCCTTGCAAAGCCCTTTTAGAGGT...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp AGAAGATGGCTTGTGATTTTCTCCCTGAAAAAGTTAGCAGCTCAGAGGGTTTCTTGCTTAGCACAGGACTaGGCACAAAAATCTTCAATA +
Preference number: 5 (lower is better)
Translates to: RRWLVIFSLKKLAAQRVSCLAQD*AQKSSI
Trigger: TATTGAAGATTTTTGTGCCAAGTCCTGTGCTAAGCA...AGAAACCCTCTGAGCTGCTAACTTTTTCAGGGAGAAAATCACAAGCCATCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp TTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGAGACTGTTTTTAAAGACTAACCTCTaGACTTTGGGCAAATCACTT +
Preference number: 5 (lower is better)
Translates to: FILSWPESNFGVGIQRLFLKTNL*TLGKSL
Trigger: AAGTGATTTGCCCAAAGTCAAGAGGTTAGTCTTTAA...AAACAGTCTCTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000237380.12
CDS-3UTR CAA 90 bp ATTAAGTGGTTTATTTTATCATGGCCTGAGAGCAACTTTGGGGTTGGCATTCAGACAGAGCAATGTGATTaGACAAGACTCAATAACAAC +
Preference number: 5 (lower is better)
Translates to: IKWFILSWPESNFGVGIQTEQCD*TRLNNN
Trigger: GTTGTTATTGAGTCTTGTCAAATCACATTGCTCTGT...CTGAATGCCAACCCCAAAGTTGCTCTCAGGCCATGATAAAATAAACCACTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237380.12