Pregenerated sensors for MED27 (Homo sapiens)
Ensembl gene IDs: ENSG00000160563Ensembl transcript IDs: ENST00000444872.3, ENST00000474263.1, ENST00000651555.1, ENST00000651950.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGCGCCTTGCTAGTTGCTGGGGACTCCCAGCAAGGAACAAGATaGACATGGTGCCTCTCCCCTGAGCCTTATAGTTTACCCTTAATA | + |
|
Preference number: 1 (lower is better) Translates to: PGALLVAGDSQQGTR*TWCLSPEPYSLPLI Trigger: TATTAAGGGTAAACTATAAGGCTCAGGGGAGAGGCACCATGTCCATCTTGTTCCTTGCTGGGAGTCCCCAGCAACTAGCAAGGCGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| 3UTR TCA 90 bp | GTCTTAAGACCAAAACACGCACGCACACACAATGCTCCCCGAAGATaGACGGCTGGAGTAAACAGTAACTCATCCTGGGTGACTGGCTAT | + |
|
Preference number: 1 (lower is better) Translates to: VLRPKHARTHNAPRR*TAGVNSNSSWVTGY Trigger: ATAGCCAGTCACCCAGGATGAGTTACTGTTTACTCCAGCCGTTCATCTTCGGGGAGCATTGTGTGTGCGTGCGTGTTTTGGTCTTAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR-3UTR TCA 90 bp | CTTAAGACCAAAACACGCACGCACACACAATGCTCCCCGAAGATGAACGGCTGGTCTTCTAGGAGATTATaGGGCGATGTGTTCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LKTKTRTHTQCSPKMNGWSSRRL*GDVFRA Trigger: TGCTCTGAACACATCGCCTCATAATCTCCTAGAAGA...CCAGCCGTTCATCTTCGGGGAGCATTGTGTGTGCGTGCGTGTTTTGGTCTTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR-3UTR GCA 90 bp | ACTCCCAGCAAGGAACAAGATGGACATGGTGCCTCTCCCCTGAGCCTTATAGTTGGAAAGGCTCTGCGTTaGAATGTAAAACGATTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: TPSKEQDGHGASPLSLIVGKALR*NVKRFQ Trigger: TTGGAATCGTTTTACATTGCAACGCAGAGCCTTTCC...AACTATAAGGCTCAGGGGAGAGGCACCATGTCCATCTTGTTCCTTGCTGGGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| 3UTR-3UTR TCA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCTTAAGTGACTTAAGGTaGAATGGTCTTACAGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VTAPGESVFFSRIQQLSILSDLR*NGLTVS Trigger: AGACACTGTAAGACCATTTCACCTTAAGTCACTTAA...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR-3UTR GCA 90 bp | CTTAAGACCAAAACACGCACGCACACACAATGCTCCCCGAAGATGAACGGCTGGAGCAAGGTTTCAATGTaGAGAATTCTTAACCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: LKTKTRTHTQCSPKMNGWSKVSM*RILNLQ Trigger: CTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCT...CCAGCCGTTCATCTTCGGGGAGCATTGTGTGTGCGTGCGTGTTTTGGTCTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR-3UTR CCA 90 bp | CTTAAGACCAAAACACGCACGCACACACAATGCTCCCCGAAGATGAACGGCTGGTGGTTAAGTCTTACATaGGGTCTGAAATTTTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: LKTKTRTHTQCSPKMNGWWLSLT*GLKFCS Trigger: TGAACAAAATTTCAGACCCCATGTAAGACTTAACCA...CCAGCCGTTCATCTTCGGGGAGCATTGTGTGTGCGTGCGTGTTTTGGTCTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR-3UTR TCA 90 bp | CCTTACCTCCCTGACGCCCATCGAAACCATCATTCTTATTCAATAAACTCTGCTCACACCTGTCTTCGGTaGATTCATGCAAATACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: PYLPDAHRNHHSYSINSAHTCLR*IHANTN Trigger: GTTTGTATTTGCATGAATTCACCGAAGACAGGTGTG...AGCAGAGTTTATTGAATAAGAATGATGGTTTCGATGGGCGTCAGGGAGGTAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR CAA 90 bp | CAGTGTCTTTCCTCTCTGGTTAAGTCTTACATGGGGTCTGAAATTTaGTTCAAAAGCAAGGTTTCAATGTGCAGAATTCTTAACCTACAG | + |
|
Preference number: 2 (lower is better) Translates to: QCLSSLVKSYMGSEI*FKSKVSMCRILNLQ Trigger: CTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCTTTTGAACAAAATTTCAGACCCCATGTAAGACTTAACCAGAGAGGAAAGACACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR TCA 72 bp | CCAAAACACGCACGCACACACAATGCTCCCCGAAGATaGACGGCTGGAGTAAACAGTAACTCATCCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PKHARTHNAPRR*TAGVNSNSSWV Trigger: CACCCAGGATGAGTTACTGTTTACTCCAGCCGTTCATCTTCGGGGAGCATTGTGTGTGCGTGCGTGTTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR CCA 72 bp | GTTGCTGGGGACTCCCAGCAAGGAACAAGATGGACATaGTGCCTCTCCCCTGAGCCTTATAGTTTACCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: VAGDSQQGTRWT*CLSPEPYSLPL Trigger: TAAGGGTAAACTATAAGGCTCAGGGGAGAGGCACCATGTCCATCTTGTTCCTTGCTGGGAGTCCCCAGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| 3UTR GCA 72 bp | GCTGGGGACTCCCAGCAAGGAACAAGATGGACATGGTaGCTCTCCCCTGAGCCTTATAGTTTACCCTTAATA | + |
|
Preference number: 3 (lower is better) Translates to: AGDSQQGTRWTW*LSPEPYSLPLI Trigger: TATTAAGGGTAAACTATAAGGCTCAGGGGAGAGGCACCATGTCCATCTTGTTCCTTGCTGGGAGTCCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCCAGCAAGGAACAAGATGGACATGGTGCCTCTCCCCTGAGCCTTATAGTTAGGAAAGGCTCTGCGTaGCAATGTAAAACGATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TPSKEQDGHGASPLSLIVRKGSA*QCKTIP Trigger: TGGAATCGTTTTACATTGCAACGCAGAGCCTTTCCT...AACTATAAGGCTCAGGGGAGAGGCACCATGTCCATCTTGTTCCTTGCTGGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| 3UTR-3UTR CAA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCATGGGGTCTGAAATTTaGTTCAAAAGCAAGGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VTAPGESVFFSRIQQLSIMGSEI*FKSKVS Trigger: TGAAACCTTGCTTTTGAACAAAATTTCAGACCCCAT...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR-3UTR CAA 90 bp | CCTTACCTCCCTGACGCCCATCGAAACCATCATTCTTATTCAATAAACTCTGCTAGCAGGATCCAACAGTaGAGCATCACTATTGTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PYLPDAHRNHHSYSINSASRIQQ*SITIVY Trigger: GTAGACAATAGTGATGCTCAACTGTTGGATCCTGCT...AGCAGAGTTTATTGAATAAGAATGATGGTTTCGATGGGCGTCAGGGAGGTAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| 3UTR TCA 72 bp | AACAGATTCGCCAAAACATTGGGAGGTTGCATTAAGTaGCTTAAGGTGAAATGGTCTTACAGTGTCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NRFAKTLGGCIK*LKVKWSYSVFP Trigger: AGGAAAGACACTGTAAGACCATTTCACCTTAAGTCACTTAATGCAACCTCCCAATGTTTTGGCGAATCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR GCA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCTTCATGCCATTCTCCTaGCTCAGCCTCCCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTAPGESVFFSRIQQLSIFMPFS*LSLPSS Trigger: GCTGCTGGGGAGGCTGAGGCAGGAGAATGGCATGAA...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR CCA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCGGCTGGAGAGTGCAGTaGAGTGATCTCGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VTAPGESVFFSRIQQLSIGWRVQ*SDLGSL Trigger: CAGTGAGCCGAGATCACTCCACTGCACTCTCCAGCC...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR TCA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCAATGCTCCCCGAAGATaGACGGCTGGAGTAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTAPGESVFFSRIQQLSINAPRR*TAGVNS Trigger: ACTGTTTACTCCAGCCGTTCATCTTCGGGGAGCATT...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR GCA 90 bp | GCTGGGGACTCCCAGCAAGGAACAAGATGGACATGGTGCCTCTCCCCTGAGCCTCTTGGAATAGAAAGTTaGTCTTTCTTGTTTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGDSQQGTRWTWCLSPEPLGIES*SFLFDH Trigger: GTGGTCAAACAAGAAAGAGCAACTTTCTATTCCAAG...AGGCTCAGGGGAGAGGCACCATGTCCATCTTGTTCCTTGCTGGGAGTCCCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS-3UTR TCA 90 bp | CCTTACCTCCCTGACGCCCATCGAAACCATCATTCTTATTCAATAAACTCTGCTGAGAGTGCAGTGGAGTaGTCTCGGCTCACTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PYLPDAHRNHHSYSINSAESAVE*SRLTAS Trigger: GCTTGCAGTGAGCCGAGATCACTCCACTGCACTCTC...AGCAGAGTTTATTGAATAAGAATGATGGTTTCGATGGGCGTCAGGGAGGTAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR GCA 90 bp | CCTTACCTCCCTGACGCCCATCGAAACCATCATTCTTATTCAATAAACTCTGCTACCCAGGCTGGAGAGTaGAGTGGAGTGATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PYLPDAHRNHHSYSINSATQAGE*SGVISA Trigger: AGCCGAGATCACTCCACTGCACTCTCCAGCCTGGGT...AGCAGAGTTTATTGAATAAGAATGATGGTTTCGATGGGCGTCAGGGAGGTAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR TCA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCACAAATCAGTCAAGCTaGTCTTACCAGAAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTAPGESVFFSRIQQLSITNQSS*SYQKHC Trigger: GCAATGCTTCTGGTAAGATCAGCTTGACTGATTTGT...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR TCA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCGGAGGTTGCATTAAGTaGCTTAAGGTGAAATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTAPGESVFFSRIQQLSIGGCIK*LKVKWS Trigger: AGACCATTTCACCTTAAGTCACTTAATGCAACCTCC...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR TCA 90 bp | CTTAAGACCAAAACACGCACGCACACACAATGCTCCCCGAAGATGAACGGCTGGCACACCTGTCTTCGGTaGATTCATGCAAATACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKTKTRTHTQCSPKMNGWHTCLR*IHANTN Trigger: GTTTGTATTTGCATGAATTCACCGAAGACAGGTGTG...CCAGCCGTTCATCTTCGGGGAGCATTGTGTGTGCGTGCGTGTTTTGGTCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR TCA 90 bp | CTTAAGACCAAAACACGCACGCACACACAATGCTCCCCGAAGATGAACGGCTGGAAAGCTTCTCATCATTaGGGTCTCTATGCCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LKTKTRTHTQCSPKMNGWKASHH*GLYAFL Trigger: TAGGAAGGCATAGAGACCTCAATGATGAGAAGCTTT...CCAGCCGTTCATCTTCGGGGAGCATTGTGTGTGCGTGCGTGTTTTGGTCTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR GCA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCAGTCCTGCATGGTACTaGAACTTGTTTGACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: VTAPGESVFFSRIQQLSISPAWY*NLFDHL Trigger: TAAGTGGTCAAACAAGTTGCAGTACCATGCAGGACT...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR CCA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCCTCATCCTGGGTGACTaGCTATTTATAAGATTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTAPGESVFFSRIQQLSILILGD*LFIRFH Trigger: GTGAAATCTTATAAATAGCCAGTCACCCAGGATGAG...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR CCA 90 bp | GCACCTTCAGAGATAGATGTGAGAGGTGAACTTTGCAGTAACTTAGTCATTAAGCAGCAAGGAACAAGATaGACATGGTGCCTCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: APSEIDVRGELCSNLVIKQQGTR*TWCLSP Trigger: AGGGGAGAGGCACCATGTCCATCTTGTTCCTTGCTG...CTTAATGACTAAGTTACTGCAAAGTTCACCTCTCACATCTATCTCTGAAGGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCCTAAAGGAAAGGCTCTGCGTTGCAATGTAAAACGATTCCAACCCTGTGGAAAGGCTCTGCGTTaGAATGTAAAACGATTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RVPKGKALRCNVKRFQPCGKALR*NVKRFQ Trigger: TTGGAATCGTTTTACATTGCAACGCAGAGCCTTTCC...ACAGGGTTGGAATCGTTTTACATTGCAACGCAGAGCCTTTCCTTTAGGGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGCACCTTCAGAGATAGATGTGAGAGGTGAACTTTGCAGTAACTTAGTCACAAGATGGACATGGTaGCTCTCCCCTGAGCCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KRAPSEIDVRGELCSNLVTRWTW*LSPEPY Trigger: ATAAGGCTCAGGGGAGAGGCACCATGTCCATCTTGT...GACTAAGTTACTGCAAAGTTCACCTCTCACATCTATCTCTGAAGGTGCTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS-3UTR CCA 90 bp | CCTTACCTCCCTGACGCCCATCGAAACCATCATTCTTATTCAATAAACTCTGCTGATTCGCCAAAACATTaGGAGGTTGCATTAAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PYLPDAHRNHHSYSINSADSPKH*EVALSD Trigger: GTCACTTAATGCAACCTCCCAATGTTTTGGCGAATC...AGCAGAGTTTATTGAATAAGAATGATGGTTTCGATGGGCGTCAGGGAGGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR CCA 90 bp | CCTTACCTCCCTGACGCCCATCGAAACCATCATTCTTATTCAATAAACTCTGCTTGGTTAAGTCTTACATaGGGTCTGAAATTTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PYLPDAHRNHHSYSINSAWLSLT*GLKFCS Trigger: TGAACAAAATTTCAGACCCCATGTAAGACTTAACCA...AGCAGAGTTTATTGAATAAGAATGATGGTTTCGATGGGCGTCAGGGAGGTAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR TCA 90 bp | CCTTCAGAGATAGATGTGAGAGGTGAACTTTGCAGTAACTTAGTCATTAAGCAATCAGTGAATCTTCACTaGATGATTACAGTGTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSEIDVRGELCSNLVIKQSVNLH*MITVYQ Trigger: CTGGTACACTGTAATCATTCAGTGAAGATTCACTGA...TTGCTTAATGACTAAGTTACTGCAAAGTTCACCTCTCACATCTATCTCTGAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS-3UTR TCA 90 bp | TTGTTCAAAAGCAAGGTTTCAATGTGCAGAATTCTTAACCTACAGAATGCCAGTGTAACTCATCCTGGGTaGCTGGCTATTTATAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFKSKVSMCRILNLQNASVTHPG*LAIYKI Trigger: AATCTTATAAATAGCCAGTCACCCAGGATGAGTTAC...ACTGGCATTCTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCTTTTGAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGAGATAGATGTGAGAGGTGAACTTTGCAGTAACTTAGTCATTAAGCAAGTGAGAGGTGAACTTTaGAGTAACTTAGTCATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSEIDVRGELCSNLVIKQVRGEL*SNLVIK Trigger: CTTAATGACTAAGTTACTGCAAAGTTCACCTCTCAC...TTGCTTAATGACTAAGTTACTGCAAAGTTCACCTCTCACATCTATCTCTGAAGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS-3UTR TCA 90 bp | TTGTTCAAAAGCAAGGTTTCAATGTGCAGAATTCTTAACCTACAGAATGCCAGTTTAAGTGACTTAAGGTaGAATGGTCTTACAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFKSKVSMCRILNLQNASLSDLR*NGLTVS Trigger: AGACACTGTAAGACCATTTCACCTTAAGTCACTTAA...ACTGGCATTCTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCTTTTGAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR GCA 90 bp | TTGTTCAAAAGCAAGGTTTCAATGTGCAGAATTCTTAACCTACAGAATGCCAGTAGCAAGGTTTCAATGTaGAGAATTCTTAACCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LFKSKVSMCRILNLQNASSKVSM*RILNLQ Trigger: CTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCT...ACTGGCATTCTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCTTTTGAACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS GCA 90 bp | GCTGCTAGCTGCATGCCATGGGAGCCTGGGCACGGGGGACGGCTCTaGCACAAGCCCACGAGCCGAGCCCACCTTGGCTTGTTTGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: AASCMPWEPGHGGRL*HKPTSRAHLGLFDH Trigger: GTGGTCAAACAAGCCAAGGTGGGCTCGGCTCGTGGGCTTGTGGCAGAGCCGTCCCCCGTGCCCAGGCTCCCATGGCATGCAGCTAGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS GCA 90 bp | AAGGTGGATGTGGTAGGCGAGGCGCTAAGCTTGGCCGCTGCTAGCTaGATGCCATGGGAGCCTGGGCACGGGGGACGGCTCTGCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: KVDVVGEALSLAAAS*MPWEPGHGGRLCHK Trigger: CTTGTGGCAGAGCCGTCCCCCGTGCCCAGGCTCCCATGGCATGCAGCTAGCAGCGGCCAAGCTTAGCGCCTCGCCTACCACATCCACCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS TCA 90 bp | ACTGCAGAGAAACTGGATCACTCACACTGCTGGCAGGAATGGAAATaGCTGCAGCCACTAGAGATGGTGAACAGATGGGTGGCTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TAEKLDHSHCWQEWK*LQPLEMVNRWVAAS Trigger: GCTGGCAGCCACCCATCTGTTCACCATCTCTAGTGGCTGCAGTCATTTCCATTCCTGCCAGCAGTGTGAGTGATCCAGTTTCTCTGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651950.1 |
||
| CDS-3UTR CAA 90 bp | ACTCCCAGCAAGGAACAAGATGGACATGGTGCCTCTCCCCTGAGCCTTATAGTTAGACGTTCCAGCTCATaGAGGTCCCGGTTGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: TPSKEQDGHGASPLSLIVRRSSS*RSRLTE Trigger: TTCGGTCAACCGGGACCTCAATGAGCTGGAACGTCT...AACTATAAGGCTCAGGGGAGAGGCACCATGTCCATCTTGTTCCTTGCTGGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS CCA 90 bp | AAGGTTGTAGAAATAATGAGGTGTGGAGAGAGTTCGTTCCACTGGTaGGCACTGCCATCAGAAGGTGGATGTGGTAGGCGAGGCGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: KVVEIMRCGESSFHW*ALPSEGGCGRRGAK Trigger: CTTAGCGCCTCGCCTACCACATCCACCTTCTGATGGCAGTGCCCACCAGTGGAACGAACTCTCTCCACACCTCATTATTTCTACAACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS-3UTR CAA 90 bp | GTCACCGCGCCTGGCGAGAGTGTTTTCTTTAGCAGGATCCAACAGTTGAGCATCAAAAGCTTCTCATCATaGAGGTCTCTATGCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VTAPGESVFFSRIQQLSIKSFSS*RSLCLP Trigger: AGGAAGGCATAGAGACCTCAATGATGAGAAGCTTTT...GATGCTCAACTGTTGGATCCTGCTAAAGAAAACACTCTCGCCAGGCGCGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR CAA 90 bp | AGAGTCCCTAAAGGAAAGGCTCTGCGTTGCAATGTAAAACGATTCCAACCCTGTAGGAAAGGCTCTGCGTaGCAATGTAAAACGATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RVPKGKALRCNVKRFQPCRKGSA*QCKTIP Trigger: TGGAATCGTTTTACATTGCAACGCAGAGCCTTTCCT...ACAGGGTTGGAATCGTTTTACATTGCAACGCAGAGCCTTTCCTTTAGGGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS CCA 90 bp | CAATTAATTTGCAAATTCACTCAAGGTTGTAGAAATAATGAGGTGTaGAGAGAGTTCGTTCCACTGGTGGGCACTGCCATCAGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLICKFTQGCRNNEV*REFVPLVGTAIRRW Trigger: CCACCTTCTGATGGCAGTGCCCACCAGTGGAACGAACTCTCTCCACACCTCATTATTTCTACAACCTTGAGTGAATTTGCAAATTAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAAAAGCAAGGTTTCAATGTGCAGAATTCTTAACCTACAGAATGCCAGTAGACGTTCCAGCTCATaGAGGTCCCGGTTGACCGAA | + |
|
Preference number: 5 (lower is better) Translates to: LFKSKVSMCRILNLQNASRRSSS*RSRLTE Trigger: TTCGGTCAACCGGGACCTCAATGAGCTGGAACGTCT...ACTGGCATTCTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCTTTTGAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAAAAGCAAGGTTTCAATGTGCAGAATTCTTAACCTACAGAATGCCAGTAGCAGGATCCAACAGTaGAGCATCACTATTGTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LFKSKVSMCRILNLQNASSRIQQ*SITIVY Trigger: GTAGACAATAGTGATGCTCAACTGTTGGATCCTGCT...ACTGGCATTCTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCTTTTGAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS GCA 90 bp | GTTTTTACAATAGCAGATGCCTTCCCTCCCACACATCAATTAATTTaGAAATTCACTCAAGGTTGTAGAAATAATGAGGTGTGGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VFTIADAFPPTHQLI*KFTQGCRNNEVWRE Trigger: CTCTCTCCACACCTCATTATTTCTACAACCTTGAGTGAATTTGCAAATTAATTGATGTGTGGGAGGGAAGGCATCTGCTATTGTAAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAAAAGCAAGGTTTCAATGTGCAGAATTCTTAACCTACAGAATGCCAGTGCATGGTACTGCAACTaGTTTGACCACTTATATGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFKSKVSMCRILNLQNASAWYCN*FDHLYA Trigger: AGCATATAAGTGGTCAAACAAGTTGCAGTACCATGC...ACTGGCATTCTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCTTTTGAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS-3UTR CAA 90 bp | GCACCTTCAGAGATAGATGTGAGAGGTGAACTTTGCAGTAACTTAGTCATTAAGGAAAGTTGCTCTTTCTaGTTTGACCACTTATATGCT | + |
|
Preference number: 5 (lower is better) Translates to: APSEIDVRGELCSNLVIKESCSF*FDHLYA Trigger: AGCATATAAGTGGTCAAACAAGAAAGAGCAACTTTC...CTTAATGACTAAGTTACTGCAAAGTTCACCTCTCACATCTATCTCTGAAGGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474263.1 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAAAAGCAAGGTTTCAATGTGCAGAATTCTTAACCTACAGAATGCCAGTGTGAATGTCACTAATTaGTTTCCCCCACAAACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LFKSKVSMCRILNLQNASVNVTN*FPPQTK Trigger: CTTCGTTTGTGGGGGAAACAAATTAGTGACATTCAC...ACTGGCATTCTGTAGGTTAAGAATTCTGCACATTGAAACCTTGCTTTTGAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651555.1 |
||
| CDS GCA 90 bp | ATTTCAAGTTTTACTGCCACAGTTAAAGGTTTTTACAATAGCAGATaGCTTCCCTCCCACACATCAATTAATTTGCAAATTCACTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ISSFTATVKGFYNSR*LPSHTSINLQIHSR Trigger: CCTTGAGTGAATTTGCAAATTAATTGATGTGTGGGAGGGAAGGCATCTGCTATTGTAAAAACCTTTAACTGTGGCAGTAAAACTTGAAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS GCA 72 bp | TGCATGCCATGGGAGCCTGGGCACGGGGGACGGCTCTaGCACAAGCCCACGAGCCGAGCCCACCTTGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: CMPWEPGHGGRL*HKPTSRAHLGL Trigger: CAAGCCAAGGTGGGCTCGGCTCGTGGGCTTGTGGCAGAGCCGTCCCCCGTGCCCAGGCTCCCATGGCATGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS GCA 72 bp | GTGGTAGGCGAGGCGCTAAGCTTGGCCGCTGCTAGCTaGATGCCATGGGAGCCTGGGCACGGGGGACGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VVGEALSLAAAS*MPWEPGHGGRL Trigger: GAGCCGTCCCCCGTGCCCAGGCTCCCATGGCATGCAGCTAGCAGCGGCCAAGCTTAGCGCCTCGCCTACCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS CCA 72 bp | GAAATAATGAGGTGTGGAGAGAGTTCGTTCCACTGGTaGGCACTGCCATCAGAAGGTGGATGTGGTAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: EIMRCGESSFHW*ALPSEGGCGRR Trigger: TCGCCTACCACATCCACCTTCTGATGGCAGTGCCCACCAGTGGAACGAACTCTCTCCACACCTCATTATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS CCA 72 bp | TGCAAATTCACTCAAGGTTGTAGAAATAATGAGGTGTaGAGAGAGTTCGTTCCACTGGTGGGCACTGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: CKFTQGCRNNEV*REFVPLVGTAI Trigger: GATGGCAGTGCCCACCAGTGGAACGAACTCTCTCCACACCTCATTATTTCTACAACCTTGAGTGAATTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||
| CDS TCA 72 bp | GTTAACGGAAGAAATATTGACAACGCCAAACGCTGGTaGTACTGCAGAGAAACTGGATCACTCACACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VNGRNIDNAKRW*YCRETGSLTLL Trigger: CAGCAGTGTGAGTGATCCAGTTTCTCTGCAGTATCACCAGCGTTTGGCGTTGTCAATATTTCTTCCGTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651950.1 |
||
| CDS CAA 72 bp | ACTACATACCTATCAGAATGGTTAACGGAAGAAATATaGACAACGCCAAACGCTGGTGATACTGCAGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TTYLSEWLTEEI*TTPNAGDTAEK Trigger: TTTCTCTGCAGTATCACCAGCGTTTGGCGTTGTCAATATTTCTTCCGTTAACCATTCTGATAGGTATGTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651950.1 |
||
| CDS GCA 72 bp | TTTACTGCCACAGTTAAAGGTTTTTACAATAGCAGATaGCTTCCCTCCCACACATCAATTAATTTGCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: FTATVKGFYNSR*LPSHTSINLQI Trigger: AATTTGCAAATTAATTGATGTGTGGGAGGGAAGGCATCTGCTATTGTAAAAACCTTTAACTGTGGCAGTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444872.3 |
||