RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED26 (Homo sapiens)

Ensembl gene IDs: ENSG00000105085

Ensembl transcript IDs: ENST00000263390.8, ENST00000597244.1, ENST00000598492.5, ENST00000598608.1, ENST00000600060.1, ENST00000601478.1, ENST00000611692.4

Found 463 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGAGCGCAGAGAGACCGCGTGACTCCCGCCCCCTCCCTCCCGCCTaGGCCGGACTCCCCGAGTTCCCAGCGCAGGAGGCAGCTGGGCCC +
Preference number: 1 (lower is better)
Translates to: KSAERPRDSRPLPPA*AGLPEFPAQEAAGP
Trigger: GGGCCCAGCTGCCTCCTGCGCTGGGAACTCGGGGAGTCCGGCCCAGGCGGGAGGGAGGGGGCGGGAGTCACGCGGTCTCTCTGCGCTCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR CCA 90 bp ACGGCACCTGTGTGGCATCGAGTGCCTGGGGCCGCGGTGAGGGGCTaGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAA +
Preference number: 1 (lower is better)
Translates to: TAPVWHRVPGAAVRG*ARSPWVHTSSAAGQ
Trigger: TTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACCGCGGCCCCAGGCACTCGATGCCACACAGGTGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 90 bp CCCCCGGCCACTGGCTGGCCTGGATTCTGTCGAGATCGTCCTGTGTaGCCTCCCGGGTCAGACCAGGGAGGTCCGTGGGCGGGCTTTGAG +
Preference number: 1 (lower is better)
Translates to: PPATGWPGFCRDRPV*PPGSDQGGPWAGFE
Trigger: CTCAAAGCCCGCCCACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 90 bp CGCGGTGAGGGGCTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTaGTGCCGGGCAAAGGAGCCCTCATGCCGTGAGTTCCGAGGACTG +
Preference number: 1 (lower is better)
Translates to: RGEGLGTEPLGAYKL*CRAKEPSCREFRGL
Trigger: CAGTCCTCGGAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 90 bp CGTGAGTTCCGAGGACTGAAAGAGCAGCGAGGGGGTCCCTTGGGATaGGGAGGCCCCGGAGTCTCGTCCACCCTGTCCAGCTGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: REFRGLKEQRGGPLG*GGPGVSSTLSSCCS
Trigger: GCTGCAGCAGCTGGACAGGGTGGACGAGACTCCGGGGCCTCCCCATCCCAAGGGACCCCCTCGCTGCTCTTTCAGTCCTCGGAACTCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 90 bp TGCCGGGTGCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTaGGCCCCTGGGGTCTGCGCGCCCGATGATGAGAGCAGGCTGCTC +
Preference number: 1 (lower is better)
Translates to: CRVLSSCFRYSDMKW*APGVCAPDDESRLL
Trigger: GAGCAGCCTGCTCTCATCATCGGGCGCGCAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGCACCCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 90 bp GGTGAGGGGCTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTaGCGGGCAAAGGAGCCCTCATGCCGTGAGTTCCGAGGACTGAAA +
Preference number: 1 (lower is better)
Translates to: GEGLGTEPLGAYKLC*RAKEPSCREFRGLK
Trigger: TTTCAGTCCTCGGAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 90 bp GGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCGTaGGTTCCGAGGACTGAAAGAGCAGCGAGGGGGTCCCTTGGGATG +
Preference number: 1 (lower is better)
Translates to: GCIQALLPGKGALMP*VPRTERAARGSLGM
Trigger: CATCCCAAGGGACCCCCTCGCTGCTCTTTCAGTCCTCGGAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 90 bp CCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATaGCGTGAGTTCCGAGGACTGAAAGAGCAGCGAGGGGGTCCCTTG +
Preference number: 1 (lower is better)
Translates to: PLGAYKLCCRAKEPS*REFRGLKEQRGGPL
Trigger: CAAGGGACCCCCTCGCTGCTCTTTCAGTCCTCGGAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 90 bp GTGGGTCACACTGGCTGGCCAGCTGGCCCGCCTGCCCAATGCCAGTaGCTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACAC +
Preference number: 1 (lower is better)
Translates to: VGHTGWPAGPPAQCQ*LTTAEKLLAHDRQH
Trigger: GTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAGCCACTGGCATTGGGCAGGCGGGCCAGCTGGCCAGCCAGTGTGACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR CCA 90 bp AAACCAGATATAAACAGGTGGCTGCCCATGGAGTGTGGGTCACACTaGCTGGCCAGCTGGCCCGCCTGCCCAATGCCAGTGGCTCACCAC +
Preference number: 1 (lower is better)
Translates to: KPDINRWLPMECGSH*LASWPACPMPVAHH
Trigger: GTGGTGAGCCACTGGCATTGGGCAGGCGGGCCAGCTGGCCAGCCAGTGTGACCCACACTCCATGGGCAGCCACCTGTTTATATCTGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR TCA 90 bp CAGGCTGCTCTGCCGGCTCAGGTAGGACTGGATGATCTCGTTGCGTaGCAGCTCCTTCCAGTTCGTCTGTTCGAAGGGGCTCTGGAGGCT +
Preference number: 1 (lower is better)
Translates to: QAALPAQVGLDDLVA*QLLPVRLFEGALEA
Trigger: AGCCTCCAGAGCCCCTTCGAACAGACGAACTGGAAGGAGCTGTCACGCAACGAGATCATCCAGTCCTACCTGAGCCGGCAGAGCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 90 bp AGCGATATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTaGCACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCG +
Preference number: 1 (lower is better)
Translates to: SDMHCVQSYQLPCVS*HPFTPGHWLAWILS
Trigger: CGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 90 bp GTCCAGCTCTGTCCTGGACTGCTGCTCCATGTGCACAGGGCTGTCTaGCCGCACTGGCTCTTTCTGGGTCAGAGGTTTGATCTGTCTCGT +
Preference number: 1 (lower is better)
Translates to: VQLCPGLLLHVHRAV*PHWLFLGQRFDLSR
Trigger: ACGAGACAGATCAAACCTCTGACCCAGAAAGAGCCAGTGCGGGCAGACAGCCCTGTGCACATGGAGCAGCAGTCCAGGACAGAGCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 90 bp GCAGAATGTTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATaGACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGACACC +
Preference number: 1 (lower is better)
Translates to: AECSSARRRRADRAI*TASSHTSYPVCPDT
Trigger: GGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAACATTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 90 bp CCGATGATGAGAGCAGGCTGCTCTGCCGGCTCAGGTAGGACTGGATaGTCTCGTTGCGTGACAGCTCCTTCCAGTTCGTCTGTTCGAAGG +
Preference number: 1 (lower is better)
Translates to: PMMRAGCSAGSGRTG*SRCVTAPSSSSVRR
Trigger: CCTTCGAACAGACGAACTGGAAGGAGCTGTCACGCAACGAGATCATCCAGTCCTACCTGAGCCGGCAGAGCAGCCTGCTCTCATCATCGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 90 bp TGCTGCTCCATGTGCACAGGGCTGTCTGCCCGCACTGGCTCTTTCTaGGTCAGAGGTTTGATCTGTCTCGTCATGGGGTCAAAGGTGAGC +
Preference number: 1 (lower is better)
Translates to: CCSMCTGLSARTGSF*VRGLICLVMGSKVS
Trigger: GCTCACCTTTGACCCCATGACGAGACAGATCAAACCTCTGACCCAGAAAGAGCCAGTGCGGGCAGACAGCCCTGTGCACATGGAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 90 bp GTTATAACTGAAACCAGATATAAACAGGTGGCTGCCCATGGAGTGTaGGTCACACTGGCTGGCCAGCTGGCCCGCCTGCCCAATGCCAGT +
Preference number: 1 (lower is better)
Translates to: VITETRYKQVAAHGV*VTLAGQLARLPNAS
Trigger: ACTGGCATTGGGCAGGCGGGCCAGCTGGCCAGCCAGTGTGACCCACACTCCATGGGCAGCCACCTGTTTATATCTGGTTTCAGTTATAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR TCA 90 bp GTTAAAGGTGACCTCTCCCACAGGTTTTCTGTGCCTGCCTGCAACTaGGGCCCCAGCTTTCAGGTGCTGGAAAGTGTCCGCACCTCTTTG +
Preference number: 1 (lower is better)
Translates to: VKGDLSHRFSVPACN*GPSFQVLESVRTSL
Trigger: CAAAGAGGTGCGGACACTTTCCAGCACCTGAAAGCTGGGGCCTCAGTTGCAGGCAGGCACAGAAAACCTGTGGGAGAGGTCACCTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR GCA 90 bp GCTTCTGTTGCTGTGTTAAAGGTGACCTCTCCCACAGGTTTTCTGTaGCTGCCTGCAACTGAGGCCCCAGCTTTCAGGTGCTGGAAAGTG +
Preference number: 1 (lower is better)
Translates to: ASVAVLKVTSPTGFL*LPATEAPAFRCWKV
Trigger: CACTTTCCAGCACCTGAAAGCTGGGGCCTCAGTTGCAGGCAGGCACAGAAAACCTGTGGGAGAGGTCACCTTTAACACAGCAACAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR TCA 90 bp GTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCCTaGGAACACAGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTT +
Preference number: 1 (lower is better)
Translates to: VHLLDQIAKLLPSAS*EHRSLGTVHSLRLL
Trigger: AAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCTGTGTTCTCAGGACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR GCA 90 bp ACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTaGGTCCTGAGAACACAGAAGTCTAGGTACTGTACATTCACTAAG +
Preference number: 1 (lower is better)
Translates to: TRCPLTGPNSKVAPF*VLRTQKSRYCTFTK
Trigger: CTTAGTGAATGTACAGTACCTAGACTTCTGTGTTCTCAGGACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR CAA 90 bp TGCTGCAGCACCGAAGCCTTTGGCTGCAAGCAGGGTCCAGGGGGCTaGCCCAGGCCCGGGGAGCTGGTGTGCGGTCGCACGGCGTTGACG +
Preference number: 2 (lower is better)
Translates to: CCSTEAFGCKQGPGG*PRPGELVCGRTALT
Trigger: CGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGGGCAAGCCCCCTGGACCCTGCTTGCAGCCAAAGGCTTCGGTGCTGCAGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp TGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGAGATCCAGGCCCGGGGAGCTaGTGTGCGGTCGCACGGCGT +
Preference number: 2 (lower is better)
Translates to: CPDTRSPPATGWPGFCRDPGPGS*CAVARR
Trigger: ACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGG...ATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp TTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCACCCGGGGAGCTGGTGTaGGGTCGCACGGCGTTGACG +
Preference number: 2 (lower is better)
Translates to: FKRPSSPCGSSDMHCVQSPGELV*GRTALT
Trigger: CGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGG...TGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp GCCCCTGGGGTCTGCGCGCCCGATGATGAGAGCAGGCTGCTCTGCCGGCTCAGGAGCTCTGTCCTGGACTaGTGCTCCATGTGCACAGGG +
Preference number: 2 (lower is better)
Translates to: APGVCAPDDESRLLCRLRSSVLD*CSMCTG
Trigger: CCCTGTGCACATGGAGCAGCAGTCCAGGACAGAGCT...CCTGAGCCGGCAGAGCAGCCTGCTCTCATCATCGGGCGCGCAGACCCCAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp CTGTGTGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCCTGGGCTTTCCGCACTaGGCAGCAGCTCGAGCCGCC +
Preference number: 2 (lower is better)
Translates to: LCVLTPVHPRPLAGLDSVLGFPH*AAARAA
Trigger: GGCGGCTCGAGCTGCTGCCCAGTGCGGAAAGCCCAG...GACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACACACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR TCA 90 bp CTGTGTGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGCGGTCGCACGGCGTTaGCGGGGATCTTGCCACTGT +
Preference number: 2 (lower is better)
Translates to: LCVLTPVHPRPLAGLDSVAVARR*RGSCHC
Trigger: ACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGC...GACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACACACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR TCA 90 bp TGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGGGCGGGCTTTGAGGCACCAGGTGAGTTCCGAGGACTaGAAGAGCAGCGAGGGGGTC +
Preference number: 2 (lower is better)
Translates to: CDLPGQTREVRGRALRHQVSSED*KSSEGV
Trigger: GACCCCCTCGCTGCTCTTTCAGTCCTCGGAACTCAC...CTGGTGCCTCAAAGCCCGCCCACGGACCTCCCTGGTCTGACCCGGGAGGTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGGCCGCGGTGAGGGGCTaGGCACGGAGCCCTTGGGTG +
Preference number: 2 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLAAVRG*ARSPWV
Trigger: CACCCAAGGGCTCCGTGCCCAGCCCCTCACCGCGGC...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGGGCCCCGCCAGCCGCTaGTGGCTCTCAGGCTGCTCA +
Preference number: 2 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVGPASR*WLSGCS
Trigger: TGAGCAGCCTGAGAGCCACCAGCGGCTGGCGGGGCC...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp GGCAGAATGTTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCCAGGAGGGGCTCGGCTaGGGACAGCCCTGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: GRMFKRPSSPCGSSDMHCQEGLG*GQPCLA
Trigger: TGCAAGGCAGGGCTGTCCCCAGCCGAGCCCCTCCTG...GCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAACATTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACGGGGGTCCCTTGGGATaGGGAGGCCCCGGAGTCTCG +
Preference number: 2 (lower is better)
Translates to: RRRRADRAICTASSHTSYGGPLG*GGPGVS
Trigger: CGAGACTCCGGGGCCTCCCCATCCCAAGGGACCCCC...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp GGCAGAATGTTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCACCGAAGCCTTTGGCTaGAAGCAGGGTCCAGGGGGC +
Preference number: 2 (lower is better)
Translates to: GRMFKRPSSPCGSSDMHCTEAFG*KQGPGG
Trigger: GCCCCCTGGACCCTGCTTGCAGCCAAAGGCTTCGGT...GCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAACATTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp CTGTGTGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCCCCGCCTCAGCCACCTaGCCGTCCAAGTTAACCGTA +
Preference number: 2 (lower is better)
Translates to: LCVLTPVHPRPLAGLDSVPASAT*PSKLTV
Trigger: TACGGTTAACTTGGACGGGCAGGTGGCTGAGGCGGG...GACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACACACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR TCA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGTGCCAGTGGAAGCGGTaGCGGCACCTGTGTGGCATC +
Preference number: 2 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVCQWKR*RHLCGI
Trigger: GATGCCACACAGGTGCCGTCACCGCTTCCACTGGCA...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp GGCAGAATGTTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGGTGCATACAAGCTCTaGTGCCGGGCAAAGGAGCCC +
Preference number: 2 (lower is better)
Translates to: GRMFKRPSSPCGSSDMHCGAYKL*CRAKEP
Trigger: GGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACC...GCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAACATTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp TGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGAGATCAGCACCGAAGCCTTTaGCTGCAAGCAGGGTCCAGG +
Preference number: 2 (lower is better)
Translates to: CPDTRSPPATGWPGFCRDQHRSL*LQAGSR
Trigger: CCTGGACCCTGCTTGCAGCCAAAGGCTTCGGTGCTG...ATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGGTGACGGCACCTGTGTaGCATCGAGTGCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLVTAPV*HRVPGA
Trigger: GGCCCCAGGCACTCGATGCCACACAGGTGCCGTCAC...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp TTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATCCACCCTGTCCAGCTaGTGCAGCACCGAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: FKRPSSPCGSSDMHCVQSSTLSS*CSTEAF
Trigger: AAAGGCTTCGGTGCTGCAGCAGCTGGACAGGGTGGA...TGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp TTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCAATGATGAGAGCAGGCTaGTCTGCCGGCTCAGGTAGG +
Preference number: 2 (lower is better)
Translates to: FKRPSSPCGSSDMHCVQSMMRAG*SAGSGR
Trigger: CCTACCTGAGCCGGCAGAGCAGCCTGCTCTCATCAT...TGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGGCTGTCTGCCCGCACTaGCTCTTTCTGGGTCAGAGG +
Preference number: 2 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVAVCPH*LFLGQR
Trigger: CCTCTGACCCAGAAAGAGCCAGTGCGGGCAGACAGC...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACACCCTGTCCAGCTGCTaGAGCACCGAAGCCTTTGGC +
Preference number: 2 (lower is better)
Translates to: RRRRADRAICTASSHTSYTLSSC*STEAFG
Trigger: GCCAAAGGCTTCGGTGCTGCAGCAGCTGGACAGGGT...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACTCTGGAGGCTGGCCTTaGCCTCCTGCTTGTCCAGCT +
Preference number: 2 (lower is better)
Translates to: RRRRADRAICTASSHTSYSGGWP*PPACPA
Trigger: AGCTGGACAAGCAGGAGGCCAAGGCCAGCCTCCAGA...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR TCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACGGAGCCCTCATGCCGTaGGTTCCGAGGACTGAAAGA +
Preference number: 2 (lower is better)
Translates to: RRRRADRAICTASSHTSYGALMP*VPRTER
Trigger: TCTTTCAGTCCTCGGAACTCACGGCATGAGGGCTCC...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR TCA 90 bp GCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTTTAACCGGACAGGCTTaGCGCCCGCCTCAGCCACCT +
Preference number: 2 (lower is better)
Translates to: ADRAICTASSHTSYPVCPLTGQA*RPPQPP
Trigger: AGGTGGCTGAGGCGGGCGTCAAGCCTGTCCGGTTAA...AGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR TCA 90 bp TGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGAGATTCAGGTAGGACTGGATaGTCTCGTTGCGTGACAGCT +
Preference number: 2 (lower is better)
Translates to: CPDTRSPPATGWPGFCRDSGRTG*SRCVTA
Trigger: AGCTGTCACGCAACGAGATCATCCAGTCCTACCTGA...ATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGGCATACAAGCTCTGCTaGCGGGCAAAGGAGCCCTCA +
Preference number: 2 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLAYKLC*RAKEPS
Trigger: TGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGC...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACTGGGCACGGAGCCCTTaGGTGCATACAAGCTCTGCT +
Preference number: 2 (lower is better)
Translates to: RRRRADRAICTASSHTSYWARSP*VHTSSA
Trigger: AGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCA...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR TCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTGTGCCTGCCTGCAACTaGGGCCCCAGCTTTCAGGTG +
Preference number: 2 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSVPACN*GPSFQV
Trigger: CACCTGAAAGCTGGGGCCTCAGTTGCAGGCAGGCAC...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CCA 90 bp TGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGAGATCGCACTGGCTCTTTCTaGGTCAGAGGTTTGATCTGT +
Preference number: 2 (lower is better)
Translates to: CPDTRSPPATGWPGFCRDRTGSF*VRGLIC
Trigger: ACAGATCAAACCTCTGACCCAGAAAGAGCCAGTGCG...ATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR TCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACGATGATCTCGTTGCGTaGCAGCTCCTTCCAGTTCGT +
Preference number: 2 (lower is better)
Translates to: RRRRADRAICTASSHTSYDDLVA*QLLPVR
Trigger: ACGAACTGGAAGGAGCTGTCACGCAACGAGATCATC...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR GCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCGGCCCGCCTGCCCAATaGCAGTGGCTCACCACAGCT +
Preference number: 2 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVGPPAQ*QWLTTA
Trigger: AGCTGTGGTGAGCCACTGGCATTGGGCAGGCGGGCC...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR GCA 90 bp GCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTCGGGTGCTCTCCTCCTaGTTCAGGTACTCAGACATG +
Preference number: 2 (lower is better)
Translates to: ADRAICTASSHTSYPVCPRVLSS*FRYSDM
Trigger: CATGTCTGAGTACCTGAAGCAGGAGGAGAGCACCCG...AGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTCCGGCTTCTGCAAGATaGGAATGCACTTTGTGGCTG +
Preference number: 2 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSPASAR*ECTLWL
Trigger: CAGCCACAAAGTGCATTCCCATCTTGCAGAAGCCGG...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAACCCCTCCCTCCCGCCTaGGCCGGACTCCCCGAGTTC +
Preference number: 2 (lower is better)
Translates to: GSLFLQIAFMTNNHKANEPLPPA*AGLPEF
Trigger: GAACTCGGGGAGTCCGGCCCAGGCGGGAGGGAGGGG...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR GCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTCCCACAGGTTTTCTGTaGCTGCCTGCAACTGAGGCC +
Preference number: 2 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPPTGFL*LPATEA
Trigger: GGCCTCAGTTGCAGGCAGGCACAGAAAACCTGTGGG...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCACAGAGGCAGTGGCATaGCCCACTGTCTCAAGACAC +
Preference number: 2 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVTEAVA*PTVSRH
Trigger: GTGTCTTGAGACAGTGGGCCATGCCACTGCCTCTGT...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTTGGCCTGACAGTGGCTaGGTAGGGAGCAAACAGAGG +
Preference number: 2 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPWPDSG*VGSKQR
Trigger: CCTCTGTTTGCTCCCTACCCAGCCACTGTCAGGCCA...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAACACTGGCTGGCCAGCTaGCCCGCCTGCCCAATGCCA +
Preference number: 2 (lower is better)
Translates to: GSLFLQIAFMTNNHKANEHWLAS*PACPMP
Trigger: TGGCATTGGGCAGGCGGGCCAGCTGGCCAGCCAGTG...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTAGAGTGTGGGTCACACTaGCTGGCCAGCTGGCCCGCC +
Preference number: 2 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLECGSH*LASWPA
Trigger: GGCGGGCCAGCTGGCCAGCCAGTGTGACCCACACTC...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCCATGACAGACAACACTaGCCTGACAGTGGCTGGGTA +
Preference number: 2 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVHDRQH*PDSGWV
Trigger: TACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATG...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR GCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAACAGGTTTTCTGTGCCTaGCTGCAACTGAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: GSLFLQIAFMTNNHKANEQVFCA*LQLRPQ
Trigger: CTGGGGCCTCAGTTGCAGGCAGGCACAGAAAACCTG...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR GCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTGATGCGTGCTTCTGTTaGTGTGTTAAAGGTGACCTC +
Preference number: 2 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPDACFC*CVKGDL
Trigger: GAGGTCACCTTTAACACAGCAACAGAAGCACGCATC...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR TCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTAAAATGCAAGAGAGATaGGATGCGTGCTTCTGTTGC +
Preference number: 2 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPKMQER*DACFCC
Trigger: GCAACAGAAGCACGCATCTCATCTCTCTTGCATTTT...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR GCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAACGCCCACCCGGCTTCTaGAAGATGGGAATGCACTTT +
Preference number: 2 (lower is better)
Translates to: GSLFLQIAFMTNNHKANERPPGF*KMGMHF
Trigger: AAAGTGCATTCCCATCTTGCAGAAGCCGGGTGGGCG...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR TCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCTTTTGTCTGGTGGTCTaGTGGAAGAGGAATTGTTTA +
Preference number: 2 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVFCLVV*WKRNCL
Trigger: TAAACAATTCCTCTTCCATCAGACCACCAGACAAAA...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR TCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTGGGACTCTAGAAAGGTaGAGTTTTCTAGATGTGTAC +
Preference number: 2 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPGTLER*SFLDVY
Trigger: GTACACATCTAGAAAACTTCACCTTTCTAGAGTCCC...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR GCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAATCTGCAAGATGGGAATaGACTTTGTGGCTGACAGGC +
Preference number: 2 (lower is better)
Translates to: GSLFLQIAFMTNNHKANESARWE*TLWLTG
Trigger: GCCTGTCAGCCACAAAGTGCATTCCCATCTTGCAGA...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAACAGCTGAGAAGCTTCTaGCACATGACAGACAACACT +
Preference number: 2 (lower is better)
Translates to: GSLFLQIAFMTNNHKANEQLRSF*HMTDNT
Trigger: AGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTG...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR GCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTTAAAGAACAGAAAATaGAAGAGAGATGAGATGCGT +
Preference number: 2 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVLKNRK*KRDEMR
Trigger: ACGCATCTCATCTCTCTTGCATTTTCTGTTCTTTAA...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR CCA 72 bp GAGAGACCGCGTGACTCCCGCCCCCTCCCTCCCGCCTaGGCCGGACTCCCCGAGTTCCCAGCGCAGGAGGCA +
Preference number: 3 (lower is better)
Translates to: ERPRDSRPLPPA*AGLPEFPAQEA
Trigger: TGCCTCCTGCGCTGGGAACTCGGGGAGTCCGGCCCAGGCGGGAGGGAGGGGGCGGGAGTCACGCGGTCTCTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR GCA 72 bp CAGCCCGGCCCCGCCAGCCGCTGGTGGCTCTCAGGCTaGTCAAGCCAGCACACTGGGCTTTCCGCACTGGGC +
Preference number: 3 (lower is better)
Translates to: QPGPASRWWLSG*SSQHTGLSALG
Trigger: GCCCAGTGCGGAAAGCCCAGTGTGCTGGCTTGAGCAGCCTGAGAGCCACCAGCGGCTGGCGGGGCCGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 72 bp ACGGCTGTGCCAGTGGAAGCGGTGACGGCACCTGTGTaGCATCGAGTGCCTGGGGCCGCGGTGAGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: TAVPVEAVTAPV*HRVPGAAVRGW
Trigger: CCAGCCCCTCACCGCGGCCCCAGGCACTCGATGCCACACAGGTGCCGTCACCGCTTCCACTGGCACAGCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CAA 90 bp ACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCAGGGTCCAGGGGGCTaGCCCAGGCCCGGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: TEPLGAYKLCCRAKEPSCQGPGG*PRPGEL
Trigger: CAGCTCCCCGGGCCTGGGCAAGCCCCCTGGACCCTG...GCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 72 bp CCGCTGGTGGCTCTCAGGCTGCTCAAGCCAGCACACTaGGCTTTCCGCACTGGGCAGCAGCTCGAGCCGCCG +
Preference number: 3 (lower is better)
Translates to: PLVALRLLKPAH*AFRTGQQLEPP
Trigger: CGGCGGCTCGAGCTGCTGCCCAGTGCGGAAAGCCCAGTGTGCTGGCTTGAGCAGCCTGAGAGCCACCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 72 bp CGAGGACTGAAAGAGCAGCGAGGGGGTCCCTTGGGATaGGGAGGCCCCGGAGTCTCGTCCACCCTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: RGLKEQRGGPLG*GGPGVSSTLSS
Trigger: GCTGGACAGGGTGGACGAGACTCCGGGGCCTCCCCATCCCAAGGGACCCCCTCGCTGCTCTTTCAGTCCTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 72 bp GTGTGGCATCGAGTGCCTGGGGCCGCGGTGAGGGGCTaGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCT +
Preference number: 3 (lower is better)
Translates to: VWHRVPGAAVRG*ARSPWVHTSSA
Trigger: AGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACCGCGGCCCCAGGCACTCGATGCCACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 72 bp GGAGGCCCCGGAGTCTCGTCCACCCTGTCCAGCTGCTaGAGCACCGAAGCCTTTGGCTGCAAGCAGGGTCCA +
Preference number: 3 (lower is better)
Translates to: GGPGVSSTLSSC*STEAFGCKQGP
Trigger: TGGACCCTGCTTGCAGCCAAAGGCTTCGGTGCTGCAGCAGCTGGACAGGGTGGACGAGACTCCGGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 72 bp TGGGGAGGCCCCGGAGTCTCGTCCACCCTGTCCAGCTaGTGCAGCACCGAAGCCTTTGGCTGCAAGCAGGGT +
Preference number: 3 (lower is better)
Translates to: WGGPGVSSTLSS*CSTEAFGCKQG
Trigger: ACCCTGCTTGCAGCCAAAGGCTTCGGTGCTGCAGCAGCTGGACAGGGTGGACGAGACTCCGGGGCCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CAA 90 bp CTGTGTGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGTCCGTGGGCGGGCTTaGAGGCACCAGCACATGCAG +
Preference number: 3 (lower is better)
Translates to: LCVLTPVHPRPLAGLDSVVRGRA*RHQHMQ
Trigger: CTGCATGTGCTGGTGCCTCAAAGCCCGCCCACGGAC...GACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACACACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 72 bp GCCGGGTGCTCTCCTCCTGCTTCAGGTACTCAGACATaGAGTGGTGAGCCCCTGGGGTCTGCGCGCCCGATG +
Preference number: 3 (lower is better)
Translates to: AGCSPPASGTQT*SGEPLGSARPM
Trigger: CATCGGGCGCGCAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGCACCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 72 bp ACTGGCTGGCCTGGATTCTGTCGAGATCGTCCTGTGTaGCCTCCCGGGTCAGACCAGGGAGGTCCGTGGGCG +
Preference number: 3 (lower is better)
Translates to: TGWPGFCRDRPV*PPGSDQGGPWA
Trigger: CGCCCACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAATCCAGGCCAGCCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 72 bp GGGCTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTaGTGCCGGGCAAAGGAGCCCTCATGCCGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: GLGTEPLGAYKL*CRAKEPSCREF
Trigger: GAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CAA 90 bp AGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCGCAGCACCGAAGCCTTaGGCTGCAAGCAGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: SARRRRADRAICTASSHTAAPKP*AASRVQ
Trigger: CTGGACCCTGCTTGCAGCCAAAGGCTTCGGTGCTGC...GGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 72 bp GGGCAAAGGAGCCCTCATGCCGTGAGTTCCGAGGACTaGAAGAGCAGCGAGGGGGTCCCTTGGGATGGGGAG +
Preference number: 3 (lower is better)
Translates to: GQRSPHAVSSED*KSSEGVPWDGE
Trigger: CTCCCCATCCCAAGGGACCCCCTCGCTGCTCTTTCAGTCCTCGGAACTCACGGCATGAGGGCTCCTTTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 72 bp CAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCGTaGGTTCCGAGGACTGAAAGAGCAGCGAGGGGGTCC +
Preference number: 3 (lower is better)
Translates to: QALLPGKGALMP*VPRTERAARGS
Trigger: GGACCCCCTCGCTGCTCTTTCAGTCCTCGGAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 72 bp CACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTaGCACCCGTTCACCCCCGGCCACTGGCTGGCCTGG +
Preference number: 3 (lower is better)
Translates to: HCVQSYQLPCVS*HPFTPGHWLAW
Trigger: CCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 72 bp CTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTaGCGGGCAAAGGAGCCCTCATGCCGTGAGTTCCGA +
Preference number: 3 (lower is better)
Translates to: LGTEPLGAYKLC*RAKEPSCREFR
Trigger: TCGGAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 72 bp ACTGGCTGGCCAGCTGGCCCGCCTGCCCAATGCCAGTaGCTCACCACAGCTGAGAAGCTTCTGGCACATGAC +
Preference number: 3 (lower is better)
Translates to: TGWPAGPPAQCQ*LTTAEKLLAHD
Trigger: GTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAGCCACTGGCATTGGGCAGGCGGGCCAGCTGGCCAGCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CAA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGTGCGGTCGCACGGCGTaGACGGGGATCTTGCCACTG +
Preference number: 3 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLCGRTA*TGILPL
Trigger: CAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCA...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CAA 90 bp TTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCAGCGTTGACGGGGATCTaGCCACTGTGCTTGTCATTC +
Preference number: 3 (lower is better)
Translates to: FKRPSSPCGSSDMHCVQSALTGI*PLCLSF
Trigger: GAATGACAAGCACAGTGGCAAGATCCCCGTCAACGC...TGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR-3UTR CAA 90 bp GGCAGAATGTTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGACTGGATGATCTCGTaGCGTGACAGCTCCTTCCAG +
Preference number: 3 (lower is better)
Translates to: GRMFKRPSSPCGSSDMHCDWMIS*RDSSFQ
Trigger: CTGGAAGGAGCTGTCACGCAACGAGATCATCCAGTC...GCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAACATTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 72 bp GACCTCTCCCACAGGTTTTCTGTGCCTGCCTGCAACTaGGGCCCCAGCTTTCAGGTGCTGGAAAGTGTCCGC +
Preference number: 3 (lower is better)
Translates to: DLSHRFSVPACN*GPSFQVLESVR
Trigger: GCGGACACTTTCCAGCACCTGAAAGCTGGGGCCTCAGTTGCAGGCAGGCACAGAAAACCTGTGGGAGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR GCA 72 bp TCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATaGACTGCGTCCAGTCATACCAGTTACCCTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SSARRRRADRAI*TASSHTSYPVC
Trigger: ACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CCA 72 bp CTGGCACATGACAGACAACACTGGCCTGACAGTGGCTaGGTAGGGAGCAAACAGAGGCAGTGGCATGGCCCA +
Preference number: 3 (lower is better)
Translates to: LAHDRQHWPDSG*VGSKQRQWHGP
Trigger: TGGGCCATGCCACTGCCTCTGTTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR TCA 72 bp CTGCCGGCTCAGGTAGGACTGGATGATCTCGTTGCGTaGCAGCTCCTTCCAGTTCGTCTGTTCGAAGGGGCT +
Preference number: 3 (lower is better)
Translates to: LPAQVGLDDLVA*QLLPVRLFEGA
Trigger: AGCCCCTTCGAACAGACGAACTGGAAGGAGCTGTCACGCAACGAGATCATCCAGTCCTACCTGAGCCGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 72 bp AGAGCAGGCTGCTCTGCCGGCTCAGGTAGGACTGGATaGTCTCGTTGCGTGACAGCTCCTTCCAGTTCGTCT +
Preference number: 3 (lower is better)
Translates to: RAGCSAGSGRTG*SRCVTAPSSSS
Trigger: AGACGAACTGGAAGGAGCTGTCACGCAACGAGATCATCCAGTCCTACCTGAGCCGGCAGAGCAGCCTGCTCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 72 bp TGTCCTGGACTGCTGCTCCATGTGCACAGGGCTGTCTaGCCGCACTGGCTCTTTCTGGGTCAGAGGTTTGAT +
Preference number: 3 (lower is better)
Translates to: CPGLLLHVHRAV*PHWLFLGQRFD
Trigger: ATCAAACCTCTGACCCAGAAAGAGCCAGTGCGGGCAGACAGCCCTGTGCACATGGAGCAGCAGTCCAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR TCA 72 bp TCGGTACCTCTTCTTCTTTTTACTGTCCGAGCCCCCTaGGGAGGCAGCATCACTGTCCGCCTTGGAGGAGTC +
Preference number: 3 (lower is better)
Translates to: SVPLLLFTVRAP*GGSITVRLGGV
Trigger: GACTCCTCCAAGGCGGACAGTGATGCTGCCTCCTCAGGGGGCTCGGACAGTAAAAAGAAGAAGAGGTACCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR GCA 72 bp GCTGTGTTAAAGGTGACCTCTCCCACAGGTTTTCTGTaGCTGCCTGCAACTGAGGCCCCAGCTTTCAGGTGC +
Preference number: 3 (lower is better)
Translates to: AVLKVTSPTGFL*LPATEAPAFRC
Trigger: GCACCTGAAAGCTGGGGCCTCAGTTGCAGGCAGGCACAGAAAACCTGTGGGAGAGGTCACCTTTAACACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR-3UTR CAA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTAGTTCTGAACTCACTTaGCCGTCCTTCCTTCCACGC +
Preference number: 3 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSSSELT*PSFLPR
Trigger: GCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACT...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR TCA 72 bp ACTAACGCTTTTTATAGCTGGTTTGCTATAGAGTTCTaGACTCACTTTGCCGTCCTTCCTTCCACGCGGTCC +
Preference number: 3 (lower is better)
Translates to: TNAFYSWFAIEF*THFAVLPSTRS
Trigger: GGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATAGCAAACCAGCTATAAAAAGCGTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR GCA 72 bp CCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTaGGTCCTGAGAACACAGAAGTCTAGGTACTGTACA +
Preference number: 3 (lower is better)
Translates to: PLTGPNSKVAPF*VLRTQKSRYCT
Trigger: TGTACAGTACCTAGACTTCTGTGTTCTCAGGACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR TCA 72 bp CTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCCTaGGAACACAGAAGTCTAGGTACTGTACATTCACTA +
Preference number: 3 (lower is better)
Translates to: LDQIAKLLPSAS*EHRSLGTVHSL
Trigger: TAGTGAATGTACAGTACCTAGACTTCTGTGTTCTCAGGACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR TCA 72 bp ATAACCATAAGGCAAACGAATCTAAAGGAATGGTTATaGGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTC +
Preference number: 3 (lower is better)
Translates to: ITIRQTNLKEWL*VFPAYRQVFPL
Trigger: GAGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTCGTTTGCCTTATGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR TCA 72 bp TTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTATaGCAAATAACCATAAGGCAAACGAATCTAAAGGAA +
Preference number: 3 (lower is better)
Translates to: FTKAPCFCKSRL*QITIRQTNLKE
Trigger: TTCCTTTAGATTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp TTGCCCAGGCCCGGGGAGCTGGTGTGCGGTCGCACGGCGTTGACGGGGATCTTGCAGGCGGCTGCCCTCTaGGCCTGCATGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LPRPGELVCGRTALTGILQAAAL*ACMPTA
Trigger: GGCAGTGGGCATGCAGGCCCAGAGGGCAGCCGCCTG...CAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGGGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp GGTGAGGGGCTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCACCAGGCCCGGGGAGCTaGTGTGCGGTCGCACGGCGT +
Preference number: 4 (lower is better)
Translates to: GEGLGTEPLGAYKLCCRAPGPGS*CAVARR
Trigger: ACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGG...TGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp GGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCGCCGCGGTGAGGGGCTaGGCACGGAGCCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GHGALGCIQALLPGKGALAAVRG*ARSPWV
Trigger: CACCCAAGGGCTCCGTGCCCAGCCCCTCACCGCGGC...GAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp CTGCTCAAGCCAGCACACTGGGCTTTCCGCACTGGGCAGCAGCTCGAGCCGCCGGGCCCCGCCAGCCGCTaGTGGCTCTCAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LLKPAHWAFRTGQQLEPPGPASR*WLSGCS
Trigger: TGAGCAGCCTGAGAGCCACCAGCGGCTGGCGGGGCC...CGGCGGCTCGAGCTGCTGCCCAGTGCGGAAAGCCCAGTGTGCTGGCTTGAGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp TTGCCCAGGCCCGGGGAGCTGGTGTGCGGTCGCACGGCGTTGACGGGGATCTTGCAGGAGGGGCTCGGCTaGGGACAGCCCTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LPRPGELVCGRTALTGILQEGLG*GQPCLA
Trigger: TGCAAGGCAGGGCTGTCCCCAGCCGAGCCCCTCCTG...CAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGGGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp GACGGCTGTGCCAGTGGAAGCGGTGACGGCACCTGTGTGGCATCGAGTGCCTGGGCAGCAGCCGGTCCCTaGTCTGCTGCGGAGACGCCG +
Preference number: 4 (lower is better)
Translates to: DGCASGSGDGTCVASSAWAAAGP*SAAETP
Trigger: CGGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGC...CCAGGCACTCGATGCCACACAGGTGCCGTCACCGCTTCCACTGGCACAGCCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp GTGCCAGTGGAAGCGGTGACGGCACCTGTGTGGCATCGAGTGCCTGGGGCCGCGGCGGTCGCACGGCGTTaGCGGGGATCTTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: VPVEAVTAPVWHRVPGAAAVARR*RGSCHC
Trigger: ACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGC...CGCGGCCCCAGGCACTCGATGCCACACAGGTGCCGTCACCGCTTCCACTGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp GGTGAGGGGCTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAGCCGGTCCCTGATCTaGTGCGGAGACGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: GEGLGTEPLGAYKLCCRASRSLI*CGDAGA
Trigger: GGCTCCGGCGTCTCCGCAGCAGATCAGGGACCGGCT...TGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp TGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGGGCGGGCTTTGAGGCACCAGTGCTCTGGGGGTCGATaGCCTGCAGCAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: CDLPGQTREVRGRALRHQCSGGR*PAAAGP
Trigger: GGGACCGGCTGCTGCAGGCCATCGACCCCCAGAGCA...CTGGTGCCTCAAAGCCCGCCCACGGACCTCCCTGGTCTGACCCGGGAGGTCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp TGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGGGCGGGCTTTGAGGCACCAGTCCGTGGGCGGGCTTTaGGGCACCAGCACATGCAGC +
Preference number: 4 (lower is better)
Translates to: CDLPGQTREVRGRALRHQSVGGL*GTSTCS
Trigger: GCTGCATGTGCTGGTGCCTCAAAGCCCGCCCACGGA...CTGGTGCCTCAAAGCCCGCCCACGGACCTCCCTGGTCTGACCCGGGAGGTCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp AAGCCAGCACACTGGGCTTTCCGCACTGGGCAGCAGCTCGAGCCGCCGTACGGGACCAGCACATGCAGCTaGCTGGCCCCTTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: KPAHWAFRTGQQLEPPYGTSTCS*LAPCRV
Trigger: CACCCGGCAAGGGGCCAGGCAGCTGCATGTGCTGGT...CCCGTACGGCGGCTCGAGCTGCTGCCCAGTGCGGAAAGCCCAGTGTGCTGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCCGGTCCCTGATCTGCTaGGGAGACGCCGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: RSPWVHTSSAAGQRSPHARSLIC*GDAGAA
Trigger: AGCGGCTCCGGCGTCTCCGCAGCAGATCAGGGACCG...GGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp GACGGCTGTGCCAGTGGAAGCGGTGACGGCACCTGTGTGGCATCGAGTGCCTGGGTGACGGCACCTGTGTaGCATCGAGTGCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: DGCASGSGDGTCVASSAWVTAPV*HRVPGA
Trigger: GGCCCCAGGCACTCGATGCCACACAGGTGCCGTCAC...CCAGGCACTCGATGCCACACAGGTGCCGTCACCGCTTCCACTGGCACAGCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
3UTR CAA 72 bp CCCAGGCCCGGGGAGCTGGTGTGCGGTCGCACGGCGTaGACGGGGATCTTGCCACTGTGCTTGTCATTCTCG +
Preference number: 4 (lower is better)
Translates to: PRPGELVCGRTA*TGILPLCLSFS
Trigger: CGAGAATGACAAGCACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CTGCTCAAGCCAGCACACTGGGCTTTCCGCACTGGGCAGCAGCTCGAGCCGCCGGGTGCATACAAGCTCTaGTGCCGGGCAAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LLKPAHWAFRTGQQLEPPGAYKL*CRAKEP
Trigger: GGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACC...CGGCGGCTCGAGCTGCTGCCCAGTGCGGAAAGCCCAGTGTGCTGGCTTGAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp TTGCCCAGGCCCGGGGAGCTGGTGTGCGGTCGCACGGCGTTGACGGGGATCTTGTCTGTCCTGGACTGCTaGTCCATGTGCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPRPGELVCGRTALTGILSVLDC*SMCTGL
Trigger: CAGCCCTGTGCACATGGAGCAGCAGTCCAGGACAGA...CAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp TGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGGGCGGGCTTTGAGGCACCAGCTCAAGCCAGCACACTaGGCTTTCCGCACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: CDLPGQTREVRGRALRHQLKPAH*AFRTGQ
Trigger: CTGCCCAGTGCGGAAAGCCCAGTGTGCTGGCTTGAG...CTGGTGCCTCAAAGCCCGCCCACGGACCTCCCTGGTCTGACCCGGGAGGTCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp TGCAGCTGCCTGGCCCCTTGCCGGGTGCTCTCCTCCTGCTTCAGGTACTCAGACTTAACCGGACAGGCTTaGCGCCCGCCTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: CSCLAPCRVLSSCFRYSDLTGQA*RPPQPP
Trigger: AGGTGGCTGAGGCGGGCGTCAAGCCTGTCCGGTTAA...GTCTGAGTACCTGAAGCAGGAGGAGAGCACCCGGCAAGGGGCCAGGCAGCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp TGCAGCTGCCTGGCCCCTTGCCGGGTGCTCTCCTCCTGCTTCAGGTACTCAGACTTACCCTGTGTGTCCTaGCACCCGTTCACCCCCGGC +
Preference number: 4 (lower is better)
Translates to: CSCLAPCRVLSSCFRYSDLPCVS*HPFTPG
Trigger: GCCGGGGGTGAACGGGTGTCAGGACACACAGGGTAA...GTCTGAGTACCTGAAGCAGGAGGAGAGCACCCGGCAAGGGGCCAGGCAGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp GGCAGAATGTTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCCCCTCTGGGCCTGCATaGCCACTGCCATCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRMFKRPSSPCGSSDMHCPSGPA*PLPSRE
Trigger: CTCCCTGGATGGCAGTGGGCATGCAGGCCCAGAGGG...GCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAACATTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp GGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCCAGCACCGAAGCCTTTaGCTGCAAGCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GHGALGCIQALLPGKGALQHRSL*LQAGSR
Trigger: CCTGGACCCTGCTTGCAGCCAAAGGCTTCGGTGCTG...GAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGGTGGCATCGAGTGCCTaGGGCCGCGGTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLVASSA*GRGEGL
Trigger: CAGCCCCTCACCGCGGCCCCAGGCACTCGATGCCAC...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp GGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCGCTGTCTGCCCGCACTaGCTCTTTCTGGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GHGALGCIQALLPGKGALAVCPH*LFLGQR
Trigger: CCTCTGACCCAGAAAGAGCCAGTGCGGGCAGACAGC...GAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp TGCAGCTGCCTGGCCCCTTGCCGGGTGCTCTCCTCCTGCTTCAGGTACTCAGACCCCCCGGCCACTGGCTaGCCTGGATTCTGTCGAGAT +
Preference number: 4 (lower is better)
Translates to: CSCLAPCRVLSSCFRYSDPPATG*PGFCRD
Trigger: ATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGG...GTCTGAGTACCTGAAGCAGGAGGAGAGCACCCGGCAAGGGGCCAGGCAGCTGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp AGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCGTGAGTTCCGAGGACTaGAAGAGCAGCGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SARRRRADRAICTASSHTVSSED*KSSEGV
Trigger: GACCCCCTCGCTGCTCTTTCAGTCCTCGGAACTCAC...GGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp TTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATCAGACATGAAGTGGTaGGCCCCTGGGGTCTGCGCG +
Preference number: 4 (lower is better)
Translates to: FKRPSSPCGSSDMHCVQSSDMKW*APGVCA
Trigger: CGCGCAGACCCCAGGGGCTCACCACTTCATGTCTGA...TGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp TGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGAGATCGAGATCGTCCTGTGTaGCCTCCCGGGTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: CPDTRSPPATGWPGFCRDRDRPV*PPGSDQ
Trigger: CTGGTCTGACCCGGGAGGTCACACAGGACGATCTCG...ATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCCACGGAGCCCTTGGGTaGATACAAGCTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RSPWVHTSSAAGQRSPHAHGALG*IQALLP
Trigger: CGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTG...GGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp GGTGAGGGGCTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCACGGGTGCTCTCCTCCTaGTTCAGGTACTCAGACATG +
Preference number: 4 (lower is better)
Translates to: GEGLGTEPLGAYKLCCRARVLSS*FRYSDM
Trigger: CATGTCTGAGTACCTGAAGCAGGAGGAGAGCACCCG...TGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp ATGGGGTCAAAGGTGAGCTTCCGCTCTTTTAACCGGACAGGCTTGACGCCCGCCAGCTGCCTGGCCCCTTaGCGGGTGCTCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: MGSKVSFRSFNRTGLTPASCLAP*RVLSSC
Trigger: GCAGGAGGAGAGCACCCGGCAAGGGGCCAGGCAGCT...GGCGGGCGTCAAGCCTGTCCGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACCTGGGCTTTCCGCACTaGGCAGCAGCTCGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RRRRADRAICTASSHTSYLGFPH*AAARAA
Trigger: GGCGGCTCGAGCTGCTGCCCAGTGCGGAAAGCCCAG...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp CTGTGTGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGGCCACTGGCTGGCCTaGATTCTGTCGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: LCVLTPVHPRPLAGLDSVGHWLA*ILSRSS
Trigger: GGACGATCTCGACAGAATCCAGGCCAGCCAGTGGCC...GACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACACACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGACTGTCCGAGCCCCCTaGGGAGGCAGCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVTVRAP*GGSITV
Trigger: GACAGTGATGCTGCCTCCTCAGGGGGCTCGGACAGT...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTCCCGGCGCTTGCGGCTaGCCAGCCTGTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSPGACG*PACPAA
Trigger: AGCGGCTGGACAGGCTGGGCAGCCGCAAGCGCCGGG...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAACACGCTCCAGGCGGCTaGCCTCTGGGCCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKHAPGG*PLGLHA
Trigger: GGCATGCAGGCCCAGAGGGCAGCCGCCTGGAGCGTG...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp GCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTCCCGGGGAGCTGGTGTaGGGTCGCACGGCGTTGACG +
Preference number: 4 (lower is better)
Translates to: ADRAICTASSHTSYPVCPPGELV*GRTALT
Trigger: CGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGG...AGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGACCGAAGCCTTTGGCTaGAAGCAGGGTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVTEAFG*KQGPGG
Trigger: GCCCCCTGGACCCTGCTTGCAGCCAAAGGCTTCGGT...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp ACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCACCCTGTCCAGCTGCTaGAGCACCGAAGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: TEPLGAYKLCCRAKEPSCTLSSC*STEAFG
Trigger: GCCAAAGGCTTCGGTGCTGCAGCAGCTGGACAGGGT...GCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CTGTGTGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCTCCACCCTGTCCAGCTaGTGCAGCACCGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LCVLTPVHPRPLAGLDSVSTLSS*CSTEAF
Trigger: AAAGGCTTCGGTGCTGCAGCAGCTGGACAGGGTGGA...GACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACACACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp TTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCAGGCCTGCATGCCCACTaGCATCCAGGGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FKRPSSPCGSSDMHCVQSGLHAH*HPGSFL
Trigger: CAAGAAGCTCCCTGGATGGCAGTGGGCATGCAGGCC...TGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp GGTGAGGGGCTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCACGAGCTCCTCGTTCTTaGTTTTCTTGCGGACGTCGT +
Preference number: 4 (lower is better)
Translates to: GEGLGTEPLGAYKLCCRARAPRS*FSCGRR
Trigger: ACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCG...TGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAATGGCCGAGGTCACGCTaGTCACCCCGGCGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKWPRSR*SPRRLR
Trigger: CCGCAAGCGCCGGGGTGACCAGCGTGACCTCGGCCA...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAACTTGGGTGGCGGCCCTaGGTGGCCGAGGTCACGCTG +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKLGWRP*VAEVTL
Trigger: CAGCGTGACCTCGGCCACCCAGGGCCGCCACCCAAG...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTCCAGGCCCGGGGAGCTaGTGTGCGGTCGCACGGCGT +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSPGPGS*CAVARR
Trigger: ACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGG...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGGGGGTCCCTTGGGATaGGGAGGCCCCGGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: ADRAICTASSHTSYPVCPGGPLG*GGPGVS
Trigger: CGAGACTCCGGGGCCTCCCCATCCCAAGGGACCCCC...AGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp ATGGGGTCAAAGGTGAGCTTCCGCTCTTTTAACCGGACAGGCTTGACGCCCGCCGACCAGGGAGGTCCGTaGGCGGGCTTTGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: MGSKVSFRSFNRTGLTPADQGGP*AGFEAP
Trigger: TGGTGCCTCAAAGCCCGCCCACGGACCTCCCTGGTC...GGCGGGCGTCAAGCCTGTCCGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGTGCCAGTGGAAGCGGTaGCGGCACCTGTGTGGCATC +
Preference number: 4 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLCQWKR*RHLCGI
Trigger: GATGCCACACAGGTGCCGTCACCGCTTCCACTGGCA...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAAAGCCGGTCCCTGATCTaGTGCGGAGACGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKSRSLI*CGDAGA
Trigger: GGCTCCGGCGTCTCCGCAGCAGATCAGGGACCGGCT...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGACACCCGTTCACCACGCTCCAGGCGGCTaGCCTCTGGGCCTGCATGCC +
Preference number: 4 (lower is better)
Translates to: YALRPVIPVTLCVLTPVHHAPGG*PLGLHA
Trigger: GGCATGCAGGCCCAGAGGGCAGCCGCCTGGAGCGTG...GTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp GGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCGGGATCTTGCCACTGTaGTTGTCATTCTCGTCACGC +
Preference number: 4 (lower is better)
Translates to: GHGALGCIQALLPGKGALGILPL*LSFSSR
Trigger: GCGTGACGAGAATGACAAGCACAGTGGCAAGATCCC...GAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp ACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCGCAAAGGAGCCCTCATaGCGTGAGTTCCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: TEPLGAYKLCCRAKEPSCAKEPS*REFRGL
Trigger: CAGTCCTCGGAACTCACGGCATGAGGGCTCCTTTGC...GCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp TTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCAGCATACAAGCTCTGCTaGCGGGCAAAGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: FKRPSSPCGSSDMHCVQSAYKLC*RAKEPS
Trigger: TGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGC...TGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp GGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCGTGAGTTCCGATGGTGGCTCTCAGGCTaGTCAAGCCAGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: GAYKLCCRAKEPSCREFRWWLSG*SSQHTG
Trigger: CCCAGTGTGCTGGCTTGAGCAGCCTGAGAGCCACCA...TCGGAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAAAGCTGCCTGGCCCCTTaGCGGGTGCTCTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKSCLAP*RVLSSC
Trigger: GCAGGAGGAGAGCACCCGGCAAGGGGCCAGGCAGCT...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAACAGGAGGGGCTCGGCTaGGGACAGCCCTGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKQEGLG*GQPCLA
Trigger: TGCAAGGCAGGGCTGTCCCCAGCCGAGCCCCTCCTG...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGAGGGGCTCTGGAGGCTaGCCTTGGCCTCCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLRGSGG*PWPPAC
Trigger: ACAAGCAGGAGGCCAAGGCCAGCCTCCAGAGCCCCT...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp ATGGGGTCAAAGGTGAGCTTCCGCTCTTTTAACCGGACAGGCTTGACGCCCGCCTTCACCCCCGGCCACTaGCTGGCCTGGATTCTGTCG +
Preference number: 4 (lower is better)
Translates to: MGSKVSFRSFNRTGLTPAFTPGH*LAWILS
Trigger: CGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAA...GGCGGGCGTCAAGCCTGTCCGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp CGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCTCTGGGTCAGAGGTTTaGTCTGTCTCGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: RSPWVHTSSAAGQRSPHASGSEV*SVSSWG
Trigger: ACCCCATGACGAGACAGATCAAACCTCTGACCCAGA...GGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp AGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCGATGATCTCGTTGCGTaGCAGCTCCTTCCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: SARRRRADRAICTASSHTDDLVA*QLLPVR
Trigger: ACGAACTGGAAGGAGCTGTCACGCAACGAGATCATC...GGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAACCCTCTGGGCCTGCATaGCCACTGCCATCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKPSGPA*PLPSRE
Trigger: CTCCCTGGATGGCAGTGGGCATGCAGGCCCAGAGGG...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp ACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCGCGGATCGAGCGATATaGACTGCGTCCAGTCATACC +
Preference number: 4 (lower is better)
Translates to: TEPLGAYKLCCRAKEPSCADRAI*TASSHT
Trigger: GGTATGACTGGACGCAGTGCATATCGCTCGATCCGC...GCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCCAGGCGGCTGCCCTCTaGGCCTGCATGCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRQAAAL*ACMPTA
Trigger: GGCAGTGGGCATGCAGGCCCAGAGGGCAGCCGCCTG...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCGGGGGTCCCTTGGGATaGGGAGGCCCCGGAGTCTCG +
Preference number: 4 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRGGPLG*GGPGVS
Trigger: CGAGACTCCGGGGCCTCCCCATCCCAAGGGACCCCC...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGTGGGCACGGAGCCCTTaGGTGCATACAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVWARSP*VHTSSA
Trigger: AGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCA...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAAGTGACGGCACCTGTGTaGCATCGAGTGCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKVTAPV*HRVPGA
Trigger: GGCCCCAGGCACTCGATGCCACACAGGTGCCGTCAC...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GGCAGAATGTTCAAGCGCCCGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCCATCACTGTCCGCCTTaGAGGAGTCTGGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GRMFKRPSSPCGSSDMHCHHCPP*RSLGKS
Trigger: GCTTTTCCCCAGACTCCTCCAAGGCGGACAGTGATG...GCAGTGCATATCGCTCGATCCGCACGGCGACGACGGGCGCTTGAACATTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp ATGGGGTCAAAGGTGAGCTTCCGCTCTTTTAACCGGACAGGCTTGACGCCCGCCTCTGGAGGCTGGCCTTaGCCTCCTGCTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MGSKVSFRSFNRTGLTPASGGWP*PPACPA
Trigger: AGCTGGACAAGCAGGAGGCCAAGGCCAGCCTCCAGA...GGCGGGCGTCAAGCCTGTCCGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTCACTGGCTGGCCAGCTaGCCCGCCTGCCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSHWLAS*PACPMP
Trigger: TGGCATTGGGCAGGCGGGCCAGCTGGCCAGCCAGTG...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCGTGGGTCACACTGGCTaGCCAGCTGGCCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRVGHTG*PAGPPA
Trigger: GGCAGGCGGGCCAGCTGGCCAGCCAGTGTGACCCAC...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTGAGTGTGGGTCACACTaGCTGGCCAGCTGGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSECGSH*LASWPA
Trigger: GGCGGGCCAGCTGGCCAGCCAGTGTGACCCACACTC...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACATCCAGGGAGCTTCTTaGCCCGCTTGGCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RRRRADRAICTASSHTSYIQGAS*PAWRAP
Trigger: AGGAGCTCGCCAAGCGGGCCAAGAAGCTCCCTGGAT...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACTCAGGTACTCAGACATaGAGTGGTGAGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RRRRADRAICTASSHTSYSGTQT*SGEPLG
Trigger: CCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGA...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTTCCGTGGGCGGGCTTTaGGGCACCAGCACATGCAGC +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSSVGGL*GTSTCS
Trigger: GCTGCATGTGCTGGTGCCTCAAAGCCCGCCCACGGA...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCGCCGCCGCCGCTCGCTaGCGCCGCCTCGAGAACCAA +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVAAAAR*RRLENQ
Trigger: TTGGTTCTCGAGGCGGCGGCAGCGAGCGGCGGCGGC...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGACACCCGTTCACTGGGGGTCGATGGCCTaGAGCAGCCGGTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: YALRPVIPVTLCVLTPVHWGSMA*SSRSLI
Trigger: GATCAGGGACCGGCTGCTGCAGGCCATCGACCCCCA...GTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAAACCGAAGCCTTTGGCTaGAAGCAGGGTCCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKTEAFG*KQGPGG
Trigger: GCCCCCTGGACCCTGCTTGCAGCCAAAGGCTTCGGT...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGAGCTCTGTCCTGGACTaGTGCTCCATGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLSSVLD*CSMCTG
Trigger: CCCTGTGCACATGGAGCAGCAGTCCAGGACAGAGCT...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp ATGGGGTCAAAGGTGAGCTTCCGCTCTTTTAACCGGACAGGCTTGACGCCCGCCATGATGAGAGCAGGCTaGTCTGCCGGCTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: MGSKVSFRSFNRTGLTPAMMRAG*SAGSGR
Trigger: CCTACCTGAGCCGGCAGAGCAGCCTGCTCTCATCAT...GGCGGGCGTCAAGCCTGTCCGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp TATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGACACCCGTTCACCGCCCGTCGTCGCCGTaGGGATCGAGCGATATGCAC +
Preference number: 4 (lower is better)
Translates to: YALRPVIPVTLCVLTPVHRPSSP*GSSDMH
Trigger: GTGCATATCGCTCGATCCGCACGGCGACGACGGGCG...GTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp TGCAGCTGCCTGGCCCCTTGCCGGGTGCTCTCCTCCTGCTTCAGGTACTCAGACCGCACTGGCTCTTTCTaGGTCAGAGGTTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: CSCLAPCRVLSSCFRYSDRTGSF*VRGLIC
Trigger: ACAGATCAAACCTCTGACCCAGAAAGAGCCAGTGCG...GTCTGAGTACCTGAAGCAGGAGGAGAGCACCCGGCAAGGGGCCAGGCAGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTACTGTCCGAGCCCCCTaGGGAGGCAGCATCACTGTC +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSTVRAP*GGSITV
Trigger: GACAGTGATGCTGCCTCCTCAGGGGGCTCGGACAGT...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGTCAGGTAGGACTGGATaGTCTCGTTGCGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVSGRTG*SRCVTA
Trigger: AGCTGTCACGCAACGAGATCATCCAGTCCTACCTGA...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp GCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGTGCACAGGGCTGTCTaGCCGCACTGGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: ADRAICTASSHTSYPVCPVHRAV*PHWLFL
Trigger: CAGAAAGAGCCAGTGCGGGCAGACAGCCCTGTGCAC...AGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAAGCTTCTTGGCCCGCTTaGCGAGCTCCTCGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKASWPA*RAPRSW
Trigger: CCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGC...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAACGGCTCTTCAGGTCATaGATGCTCCTGGGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKRLFRS*MLLGGP
Trigger: TGGCCCACCCAGGAGCATCCATGACCTGAAGAGCCG...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCTTTGGAGACCTTGGGTaGCGGCCCTGGGTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRFGDLG*RPWVAE
Trigger: CTCGGCCACCCAGGGCCGCCACCCAAGGTCTCCAAA...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAAGCCGCGGTGAGGGGCTaGGCACGGAGCCCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKAAVRG*ARSPWV
Trigger: CACCCAAGGGCTCCGTGCCCAGCCCCTCACCGCGGC...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
3UTR CAA 72 bp TCAAAGGTGAGCTTCCGCTCTTTTAACCGGACAGGCTaGACGCCCGCCTCAGCCACCTGCCCGTCCAAGTTA +
Preference number: 4 (lower is better)
Translates to: SKVSFRSFNRTG*TPASATCPSKL
Trigger: TAACTTGGACGGGCAGGTGGCTGAGGCGGGCGTCAAGCCTGTCCGGTTAAAAGAGCGGAAGCTCACCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp TATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGACACCCGTTCACTCTCCAGGCTGGAGATaGCTTCCAGCACCGCCACCA +
Preference number: 4 (lower is better)
Translates to: YALRPVIPVTLCVLTPVHSPGWR*LPAPPP
Trigger: TGGTGGCGGTGCTGGAAGTCATCTCCAGCCTGGAGA...GTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR TCA 90 bp GCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGGAGCCCTCATGCCGTaGGTTCCGAGGACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: ADRAICTASSHTSYPVCPGALMP*VPRTER
Trigger: TCTTTCAGTCCTCGGAACTCACGGCATGAGGGCTCC...AGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCACGGTCCCTGATCTGCTaGGGAGACGCCGGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAARSLIC*GDAGAA
Trigger: AGCGGCTCCGGCGTCTCCGCAGCAGATCAGGGACCG...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCACGCAGCGCCGCCTCATaGTGGTGTGCCGGCTCGATG +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAARSAAS*WCAGSM
Trigger: CATCGAGCCGGCACACCAGCATGAGGCGGCGCTGCG...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCTGCTCTGGGGGTCGATaGCCTGCAGCAGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVCSGGR*PAAAGP
Trigger: GGGACCGGCTGCTGCAGGCCATCGACCCCCAGAGCA...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCAATGGATGCTCCTGGGTaGGCCAGCCGCCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAAMDAPG*ASRPHL
Trigger: GAGGTGGGGGCGGCTGGCCCACCCAGGAGCATCCAT...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCGCGGTCGCACGGCGTTaGCGGGGATCTTGCCACTGT +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVAVARR*RGSCHC
Trigger: ACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGC...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCTCGTGTTTCCTCAAGTaGCTCTTTGGTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: RSPWVHTSSAAGQRSPHASCFLK*LFGNRV
Trigger: TACCCTATTACCAAAGAGGCACTTGAGGAAACACGA...GGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCTCTTCAGGTCATGGATaGTCCTGGGTGGGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRSSGHG*SWVGQP
Trigger: CGGCTGGCCCACCCAGGAGCATCCATGACCTGAAGA...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCAGGCCTGCATGCCCACTaGCATCCAGGGAGCTGGCGA +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAAGLHAH*HPGSWR
Trigger: TCGCCAGCTCCCTGGATGGCAGTGGGCATGCAGGCC...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTGCATACAAGCTCTGCTaGCGGGCAAAGGAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSAYKLC*RAKEPS
Trigger: TGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGC...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCAGACCAGGGAGGTCCGTaGGCGGGCTTTGAGGCACCA +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAADQGGP*AGFEAP
Trigger: TGGTGCCTCAAAGCCCGCCCACGGACCTCCCTGGTC...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTGGTGTGCCGGCTCGATaGGCTTCTGCCAGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPGVPAR*ASASSA
Trigger: TGCGGAGCTGGCAGAAGCTCATCGAGCCGGCACACC...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTCTCTGGACTCCCACTaGTCCCGTTGGTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNSLDSH*SRWWGG
Trigger: CCCTCCCCACCAACGGGATCAGTGGGAGTCCAGAGA...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCATGCCAGTGGAAGCGGTaGCGGCACCTGTGTGGCATC +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAACQWKR*RHLCGI
Trigger: GATGCCACACAGGTGCCGTCACCGCTTCCACTGGCA...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTCAGACATGAAGTGGTaGGCCCCTGGGGTCTGCGCG +
Preference number: 4 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNSDMKW*APGVCA
Trigger: CGCGCAGACCCCAGGGGCTCACCACTTCATGTCTGA...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAATGGGGGTCGATGGCCTaGAGCAGCCGGTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKWGSMA*SSRSLI
Trigger: GATCAGGGACCGGCTGCTGCAGGCCATCGACCCCCA...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAAACCAGCACATGCAGCTaGCTGGCCCCTTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKTSTCS*LAPCRV
Trigger: CACCCGGCAAGGGGCCAGGCAGCTGCATGTGCTGGT...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CGTCGTCGCCGTGCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACTCGAGCGATATGCACTaGGTCCAGTCATACCAGTTA +
Preference number: 4 (lower is better)
Translates to: RRRRADRAICTASSHTSYSSDMH*VQSYQL
Trigger: TAACTGGTATGACTGGACGCAGTGCATATCGCTCGA...GTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGCACGGCGACGACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR GCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACGCCCGTCGTCGCCGTaGGGATCGAGCGATATGCAC +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKRPSSP*GSSDMH
Trigger: GTGCATATCGCTCGATCCGCACGGCGACGACGGGCG...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCGCCCCAGCTTTCAGGTaGTGGAAAGTGTCCGCACCT +
Preference number: 4 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRAPAFR*WKVSAP
Trigger: AGGTGCGGACACTTTCCAGCACCTGAAAGCTGGGGC...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCTGCCCGGGCAGCCTCTaGAGGTCATTGCGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVCPGSL*RSLRLF
Trigger: GAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGCA...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCTTCACCCCCGGCCACTaGCTGGCCTGGATTCTGTCG +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVFTPGH*LAWILS
Trigger: CGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAA...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCTGGCCTGACAGTGGCTaGGTAGGGAGCAAACAGAGG +
Preference number: 4 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRWPDSG*VGSKQR
Trigger: CCTCTGTTTGCTCCCTACCCAGCCACTGTCAGGCCA...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTGCAGCAGCCGGTCCCTaGTCTGCTGCGGAGACGCCG +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVAAAGP*SAAETP
Trigger: CGGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGC...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTCTCCAGGCTGGAGATaGCTTCCAGCACCGCCACCA +
Preference number: 4 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNSPGWR*LPAPPP
Trigger: TGGTGGCGGTGCTGGAAGTCATCTCCAGCCTGGAGA...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTTTACCCTGTGTGTCCTaGCACCCGTTCACCCCCGGC +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPLPCVS*HPFTPG
Trigger: GCCGGGGGTGAACGGGTGTCAGGACACACAGGGTAA...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTAGCCTGTCCAGCCGCTaGCCGGGCAGCCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVSLSSR*PGSLWR
Trigger: CCTCCAGAGGCTGCCCGGGCAGCGGCTGGACAGGCT...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTGGTCACCCCGGCGCTTaGGGCTGCCCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVGHPGA*GCPACP
Trigger: TGGACAGGCTGGGCAGCCGCAAGCGCCGGGGTGACC...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGGATCTTGCCACTGTaGTTGTCATTCTCGTCACGC +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSGILPL*LSFSSR
Trigger: GCGTGACGAGAATGACAAGCACAGTGGCAAGATCCC...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACACCCTGTCCAGCTGCTaGAGCACCGAAGCCTTTGGC +
Preference number: 4 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNTLSSC*STEAFG
Trigger: GCCAAAGGCTTCGGTGCTGCAGCAGCTGGACAGGGT...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCGGTGCATACAAGCTCTaGTGCCGGGCAAAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVGAYKL*CRAKEP
Trigger: GGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACC...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCCACGGAGCCCTTGGGTaGATACAAGCTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVHGALG*IQALLP
Trigger: CGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTG...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAATGTGTGCGCCCCCGTTaGCAGAGCCGGTGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANECVRPR*QSRWPP
Trigger: CGGGGGCCACCGGCTCTGCCAACGGGGGCGCACACA...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCTGCCATCCAGGGAGCTaGCGAAGCTCTCTGGACTCC +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVCHPGS*RSSLDS
Trigger: GGAGTCCAGAGAGCTTCGCCAGCTCCCTGGATGGCA...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCCAGCACCGAAGCCTTTaGCTGCAAGCAGGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVQHRSL*LQAGSR
Trigger: CCTGGACCCTGCTTGCAGCCAAAGGCTTCGGTGCTG...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTGTGGCATCGAGTGCCTaGGGCCGCGGTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVVASSA*GRGEGL
Trigger: CAGCCCCTCACCGCGGCCCCAGGCACTCGATGCCAC...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCAGCTGTCTGCCCGCACTaGCTCTTTCTGGGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAAAVCPH*LFLGQR
Trigger: CCTCTGACCCAGAAAGAGCCAGTGCGGGCAGACAGC...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTAGGGGCTCTGGAGGCTaGCCTTGGCCTCCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPRGSGG*PWPPAC
Trigger: ACAAGCAGGAGGCCAAGGCCAGCCTCCAGAGCCCCT...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTACCCCTCCCTCCCGCCTaGGCCGGACTCCCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLPLPPA*AGLPEF
Trigger: GAACTCGGGGAGTCCGGCCCAGGCGGGAGGGAGGGG...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTCATGACAGACAACACTaGCCTGACAGTGGCTGGGTA +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSHDRQH*PDSGWV
Trigger: TACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATG...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTGTGAGTTCCGAGGACTaGAAGAGCAGCGAGGGGGTC +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPVSSED*KSSEGV
Trigger: GACCCCCTCGCTGCTCTTTCAGTCCTCGGAACTCAC...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAAGGCTCGATGAGCTTCTaGCAGCTCCGCAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKGSMSF*QLRSSF
Trigger: GAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCC...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTACGGCCGGCAGTTGTGTaGGCCCCCGTTGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLRPAVV*APVGRA
Trigger: GGCTCTGCCAACGGGGGCGCACACAACTGCCGGCCG...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTACCCGGGGAGCTGGTGTaGGGTCGCACGGCGTTGACG +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLPGELV*GRTALT
Trigger: CGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGG...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCAGCAAAGGAGCCCTCATaGCGTGAGTTCCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAAAKEPS*REFRGL
Trigger: CAGTCCTCGGAACTCACGGCATGAGGGCTCCTTTGC...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCATCTGTCCTGGACTGCTaGTCCATGTGCACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAASVLDC*SMCTGL
Trigger: CAGCCCTGTGCACATGGAGCAGCAGTCCAGGACAGA...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCATGATGAGAGCAGGCTaGTCTGCCGGCTCAGGTAGG +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVMMRAG*SAGSGR
Trigger: CCTACCTGAGCCGGCAGAGCAGCCTGCTCTCATCAT...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTTCTGCAAGATGGGAATaGACTTTGTGGCTGACAGGC +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSSARWE*TLWLTG
Trigger: GCCTGTCAGCCACAAAGTGCATTCCCATCTTGCAGA...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACCAGGTTTTCTGTGCCTaGCTGCAACTGAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNQVFCA*LQLRPQ
Trigger: CTGGGGCCTCAGTTGCAGGCAGGCACAGAAAACCTG...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCCCCACAGGTTTTCTGTaGCTGCCTGCAACTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVPTGFL*LPATEA
Trigger: GGCCTCAGTTGCAGGCAGGCACAGAAAACCTGTGGG...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAAGATGCGTGCTTCTGTTaGTGTGTTAAAGGTGACCTC +
Preference number: 4 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKDACFC*CVKGDL
Trigger: GAGGTCACCTTTAACACAGCAACAGAAGCACGCATC...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTAGGTGGCGGCCCTGGGTaGCCGAGGTCACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLGGGPG*PRSRWS
Trigger: TGACCAGCGTGACCTCGGCCACCCAGGGCCGCCACC...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCGCTGGCGAAGCTCTCTaGACTCCCACTGATCCCGTT +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVAGEAL*TPTDPV
Trigger: AACGGGATCAGTGGGAGTCCAGAGAGCTTCGCCAGC...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTCTGGGCTTTCCGCACTaGGCAGCAGCTCGAGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVLGFPH*AAARAA
Trigger: GGCGGCTCGAGCTGCTGCCCAGTGCGGAAAGCCCAG...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTAGGCCCCGCCAGCCGCTaGTGGCTCTCAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLGPASR*WLSGCS
Trigger: TGAGCAGCCTGAGAGCCACCAGCGGCTGGCGGGGCC...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTTCAGGTACTCAGACATaGAGTGGTGAGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPSGTQT*SGEPLG
Trigger: CCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGA...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCAATGCACTTTGTGGCTaGCAGGCCGGTCAGTCCAAG +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVNALCG*QAGQSK
Trigger: CTTGGACTGACCGGCCTGTCAGCCACAAAGTGCATT...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAAAGCTCTGTCCTGGACTaGTGCTCCATGTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKSSVLD*CSMCTG
Trigger: CCCTGTGCACATGGAGCAGCAGTCCAGGACAGAGCT...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACCGGGTGCTCTCCTCCTaGTTCAGGTACTCAGACATG +
Preference number: 4 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNRVLSS*FRYSDM
Trigger: CATGTCTGAGTACCTGAAGCAGGAGGAGAGCACCCG...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTCCTGCCCAATGCCAGTaGCTCACCACAGCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPPAQCQ*LTTAEK
Trigger: CTTCTCAGCTGTGGTGAGCCACTGGCATTGGGCAGG...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCATCAGGTAGGACTGGATaGTCTCGTTGCGTGACAGCT +
Preference number: 4 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAASGRTG*SRCVTA
Trigger: AGCTGTCACGCAACGAGATCATCCAGTCCTACCTGA...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTAAAATGCAAGAGAGATaGGATGCGTGCTTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSKMQER*DACFCC
Trigger: GCAACAGAAGCACGCATCTCATCTCTCTTGCATTTT...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCCTCCCTTCTGCGTCCTaGGAACACAGAAGTCTAGGT +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVLPSAS*EHRSLG
Trigger: ACCTAGACTTCTGTGTTCTCAGGACGCAGAAGGGAG...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAAGCGGATCGAGCGATATaGACTGCGTCCAGTCATACC +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKADRAI*TASSHT
Trigger: GGTATGACTGGACGCAGTGCATATCGCTCGATCCGC...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTCGCCCACCCGGCTTCTaGAAGATGGGAATGCACTTT +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPRPPGF*KMGMHF
Trigger: AAAGTGCATTCCCATCTTGCAGAAGCCGGGTGGGCG...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAAAGTTGCTCCCTTCTaGGTCCTGAGAACACAGAAG +
Preference number: 4 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRKVAPF*VLRTQK
Trigger: CTTCTGTGTTCTCAGGACGCAGAAGGGAGCAACTTT...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTAAGCGCCGCCTCATGCTaGTGTGCCGGCTCGATGAGC +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLSAASC*CAGSMS
Trigger: GCTCATCGAGCCGGCACACCAGCATGAGGCGGCGCT...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTTGGGAATGCACTTTGTaGCTGACAGGCCGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPWECTL*LTGRSV
Trigger: GACTGACCGGCCTGTCAGCCACAAAGTGCATTCCCA...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTATTAACCGGACAGGCTTaGCGCCCGCCTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLLTGQA*RPPQPP
Trigger: AGGTGGCTGAGGCGGGCGTCAAGCCTGTCCGGTTAA...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAATCTGGGTCAGAGGTTTaGTCTGTCTCGTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKSGSEV*SVSSWG
Trigger: ACCCCATGACGAGACAGATCAAACCTCTGACCCAGA...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAACGAGATCGTCCTGTGTaGCCTCCCGGGTCAGACCAG +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANERDRPV*PPGSDQ
Trigger: CTGGTCTGACCCGGGAGGTCACACAGGACGATCTCG...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGGACTCTAGAAAGGTaGAGTTTTCTAGATGTGTAC +
Preference number: 4 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSGTLER*SFLDVY
Trigger: GTACACATCTAGAAAACTTCACCTTTCTAGAGTCCC...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTCGCCTCATGCTGGTGTaGCGGCTCGATGAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVRLMLV*RLDELL
Trigger: CAGAAGCTCATCGAGCCGGCACACCAGCATGAGGCG...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTGGTGGCTCTCAGGCTaGTCAAGCCAGCACACTGGG +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVWWLSG*SSQHTG
Trigger: CCCAGTGTGCTGGCTTGAGCAGCCTGAGAGCCACCA...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTCCCGCCTCAGCCACCTaGCCGTCCAAGTTAACCGTA +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVPASAT*PSKLTV
Trigger: TACGGTTAACTTGGACGGGCAGGTGGCTGAGGCGGG...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAATCCGCAGCAGCTTCTTaGCCCGCTTGGCGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANESAAAS*PAWRAP
Trigger: AGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGA...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACCGCACTGGCTCTTTCTaGGTCAGAGGTTTGATCTGT +
Preference number: 4 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNRTGSF*VRGLIC
Trigger: ACAGATCAAACCTCTGACCCAGAAAGAGCCAGTGCG...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTGGCCACTGGCTGGCCTaGATTCTGTCGAGATCGTCC +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVGHWLA*ILSRSS
Trigger: GGACGATCTCGACAGAATCCAGGCCAGCCAGTGGCC...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTACCCCCGGCCACTGGCTaGCCTGGATTCTGTCGAGAT +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLPPATG*PGFCRD
Trigger: ATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGG...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTCCAGCTTTCAGGTGCTaGAAAGTGTCCGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPPAFRC*KVSAPL
Trigger: AAGAGGTGCGGACACTTTCCAGCACCTGAAAGCTGG...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTAGTGCACAGGGCTGTCTaGCCGCACTGGCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLVHRAV*PHWLFL
Trigger: CAGAAAGAGCCAGTGCGGGCAGACAGCCCTGTGCAC...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCTCGAGCGATATGCACTaGGTCCAGTCATACCAGTTA +
Preference number: 4 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVSSDMH*VQSYQL
Trigger: TAACTGGTATGACTGGACGCAGTGCATATCGCTCGA...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAAGGGACCAGGGGGTCGTaGCTAGCTTTGGAGACCTTG +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANEGTRGS*LALETL
Trigger: CAAGGTCTCCAAAGCTAGCCACGACCCCCTGGTCCC...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTGGGCACGGAGCCCTTaGGTGCATACAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVWARSP*VHTSSA
Trigger: AGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCA...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTACTCAAGCCAGCACACTaGGCTTTCCGCACTGGGCAG +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLLKPAH*AFRTGQ
Trigger: CTGCCCAGTGCGGAAAGCCCAGTGTGCTGGCTTGAG...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTATCTGGAGGCTGGCCTTaGCCTCCTGCTTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLSGGWP*PPACPA
Trigger: AGCTGGACAAGCAGGAGGCCAAGGCCAGCCTCCAGA...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAAGGAGCCCTCATGCCGTaGGTTCCGAGGACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANEGALMP*VPRTER
Trigger: TCTTTCAGTCCTCGGAACTCACGGCATGAGGGCTCC...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTGCCTCTGGAGGTCATTaGGGCTCTTCAGGTCATGGA +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVASGGH*GSSGHG
Trigger: TCCATGACCTGAAGAGCCGCAATGACCTCCAGAGGC...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAATCCACCCTGTCCAGCTaGTGCAGCACCGAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANESTLSS*CSTEAF
Trigger: AAAGGCTTCGGTGCTGCAGCAGCTGGACAGGGTGGA...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTGCAAGAGAGATGAGATaGGTGCTTCTGTTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPAREMR*VLLLLC
Trigger: ACACAGCAACAGAAGCACGCATCTCATCTCTCTTGC...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTCATCACTGTCCGCCTTaGAGGAGTCTGGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVHHCPP*RSLGKS
Trigger: GCTTTTCCCCAGACTCCTCCAAGGCGGACAGTGATG...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTGATGATCTCGTTGCGTaGCAGCTCCTTCCAGTTCGT +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVDDLVA*QLLPVR
Trigger: ACGAACTGGAAGGAGCTGTCACGCAACGAGATCATC...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAAACAGAGGCAGTGGCATaGCCCACTGTCTCAAGACAC +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANETEAVA*PTVSRH
Trigger: GTGTCTTGAGACAGTGGGCCATGCCACTGCCTCTGT...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTCCAGATATAAACAGGTaGCTGCCCATGGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVPDINR*LPMECG
Trigger: CCCACACTCCATGGGCAGCCACCTGTTTATATCTGG...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAAGTTCTGAACTCACTTTaGCGTCCTTCCTTCCACGCG +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANEVLNSL*RPSFHA
Trigger: CGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAAC...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAACGAGCTCCTCGTTCTTaGTTTTCTTGCGGACGTCGT +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANERAPRS*FSCGRR
Trigger: ACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCG...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAATTTTGTCTGGTGGTCTaGTGGAAGAGGAATTGTTTA +
Preference number: 4 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKFCLVV*WKRNCL
Trigger: TAAACAATTCCTCTTCCATCAGACCACCAGACAAAA...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CCA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTCAGCTGAGAAGCTTCTaGCACATGACAGACAACACT +
Preference number: 4 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVQLRSF*HMTDNT
Trigger: AGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTG...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTTGCAAATCGCGTTTATaGCAAATAACCATAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPCKSRL*QITIRQ
Trigger: TTGCCTTATGGTTATTTGTCATAAACGCGATTTGCA...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR TCA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAATTTGCTATAGAGTTCTaGACTCACTTTGCCGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSLFLQIAFMTNNHKANEFAIEF*THFAVL
Trigger: AAGGACGGCAAAGTGAGTTCAGAACTCTATAGCAAA...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTATCGTGTTTCCTCAAGTaGCTCTTTGGTAATAGGGTA +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLSCFLK*LFGNRV
Trigger: TACCCTATTACCAAAGAGGCACTTGAGGAAACACGA...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR GCA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTATTAAAGAACAGAAAATaGAAGAGAGATGAGATGCGT +
Preference number: 4 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLLKNRK*KRDEMR
Trigger: ACGCATCTCATCTCTCTTGCATTTTCTGTTCTTTAA...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS GCA 90 bp GCCCTGGGTGGCCGAGGTCACGCTGGTCACCCCGGCGCTTGCGGCTaGCCAGCCTGTCCAGCCGCTGCCCGGGCAGCCTCTGGAGGTCAT +
Preference number: 5 (lower is better)
Translates to: ALGGRGHAGHPGACG*PACPAAARAASGGH
Trigger: ATGACCTCCAGAGGCTGCCCGGGCAGCGGCTGGACAGGCTGGGCAGCCGCAAGCGCCGGGGTGACCAGCGTGACCTCGGCCACCCAGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS GCA 90 bp TTGGCAGAGCCGGTGGCCCCCGCCAGCCCCCGCAGCGCCGCCTCATaGTGGTGTGCCGGCTCGATGAGCTTCTGCCAGCTCCGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LAEPVAPASPRSAAS*WCAGSMSFCQLRSS
Trigger: GCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCCGGCACACCAGCATGAGGCGGCGCTGCGGGGGCTGGCGGGGGCCACCGGCTCTGCCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
CDS CCA 90 bp GCAGAGCCGGTGGCCCCCGCCAGCCCCCGCAGCGCCGCCTCATGCTaGTGTGCCGGCTCGATGAGCTTCTGCCAGCTCCGCAGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AEPVAPASPRSAASC*CAGSMSFCQLRSSF
Trigger: GAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCCGGCACACCAGCATGAGGCGGCGCTGCGGGGGCTGGCGGGGGCCACCGGCTCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
CDS CCA 90 bp AGGGGGTCGTGGCTAGCTTTGGAGACCTTGGGTGGCGGCCCTGGGTaGCCGAGGTCACGCTGGTCACCCCGGCGCTTGCGGCTGCCCAGC +
Preference number: 5 (lower is better)
Translates to: RGSWLALETLGGGPG*PRSRWSPRRLRLPS
Trigger: GCTGGGCAGCCGCAAGCGCCGGGGTGACCAGCGTGACCTCGGCCACCCAGGGCCGCCACCCAAGGTCTCCAAAGCTAGCCACGACCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CCA 90 bp GACCAGGGGGTCGTGGCTAGCTTTGGAGACCTTGGGTGGCGGCCCTaGGTGGCCGAGGTCACGCTGGTCACCCCGGCGCTTGCGGCTGCC +
Preference number: 5 (lower is better)
Translates to: DQGVVASFGDLGWRP*VAEVTLVTPALAAA
Trigger: GGCAGCCGCAAGCGCCGGGGTGACCAGCGTGACCTCGGCCACCCAGGGCCGCCACCCAAGGTCTCCAAAGCTAGCCACGACCCCCTGGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS TCA 90 bp CCGCCAGCCCCCGCAGCGCCGCCTCATGCTGGTGTGCCGGCTCGATaGGCTTCTGCCAGCTCCGCAGCAGCTTCTTGGCCCGCTTGGCGA +
Preference number: 5 (lower is better)
Translates to: PPAPAAPPHAGVPAR*ASASSAAASWPAWR
Trigger: TCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCCGGCACACCAGCATGAGGCGGCGCTGCGGGGGCTGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
CDS GCA 90 bp TTGCTCTGGGGGTCGATGGCCTGCAGCAGCCGGTCCCTGATCTGCTaGGGAGACGCCGGAGCCGCTGTCATTGCCTGGGCGAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: LLWGSMACSSRSLIC*GDAGAAVIAWARRG
Trigger: CCCCCGCCTCGCCCAGGCAATGACAGCGGCTCCGGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGGCCATCGACCCCCAGAGCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000600060.1
CDS GCA 90 bp CGCTGGTCACCCCGGCGCTTGCGGCTGCCCAGCCTGTCCAGCCGCTaGCCGGGCAGCCTCTGGAGGTCATTGCGGCTCTTCAGGTCATGG +
Preference number: 5 (lower is better)
Translates to: RWSPRRLRLPSLSSR*PGSLWRSLRLFRSW
Trigger: CCATGACCTGAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGCAGCGGCTGGACAGGCTGGGCAGCCGCAAGCGCCGGGGTGACCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS GCA 90 bp CCCCGCAGCGCCGCCTCATGCTGGTGTGCCGGCTCGATGAGCTTCTaGCAGCTCCGCAGCAGCTTCTTGGCCCGCTTGGCGAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PRSAASCWCAGSMSF*QLRSSFLARLASSS
Trigger: CGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCCGGCACACCAGCATGAGGCGGCGCTGCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
CDS GCA 90 bp GCCCGGGCAGCCTCTGGAGGTCATTGCGGCTCTTCAGGTCATGGATaGTCCTGGGTGGGCCAGCCGCCCCCACCTCCGGCCGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: ARAASGGHCGSSGHG*SWVGQPPPPPAGSC
Trigger: ACAACTGCCGGCCGGAGGTGGGGGCGGCTGGCCCACCCAGGAGCATCCATGACCTGAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS GCA 90 bp TGCCCAGCCTGTCCAGCCGCTGCCCGGGCAGCCTCTGGAGGTCATTaGGGCTCTTCAGGTCATGGATGCTCCTGGGTGGGCCAGCCGCCC +
Preference number: 5 (lower is better)
Translates to: CPACPAAARAASGGH*GSSGHGCSWVGQPP
Trigger: GGGCGGCTGGCCCACCCAGGAGCATCCATGACCTGAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGCAGCGGCTGGACAGGCTGGGCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CCA 90 bp CCTCTGGAGGTCATTGCGGCTCTTCAGGTCATGGATGCTCCTGGGTaGGCCAGCCGCCCCCACCTCCGGCCGGCAGTTGTGTGCGCCCCC +
Preference number: 5 (lower is better)
Translates to: PLEVIAALQVMDAPG*ASRPHLRPAVVCAP
Trigger: GGGGGCGCACACAACTGCCGGCCGGAGGTGGGGGCGGCTGGCCCACCCAGGAGCATCCATGACCTGAAGAGCCGCAATGACCTCCAGAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
CDS GCA 90 bp ATGTTGCTCTGGGGGTCGATGGCCTGCAGCAGCCGGTCCCTGATCTaGTGCGGAGACGCCGGAGCCGCTGTCATTGCCTGGGCGAGGCGG +
Preference number: 5 (lower is better)
Translates to: MLLWGSMACSSRSLI*CGDAGAAVIAWARR
Trigger: CCGCCTCGCCCAGGCAATGACAGCGGCTCCGGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGGCCATCGACCCCCAGAGCAACAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000600060.1
CDS CCA 90 bp CGGATCCTCAGGCGGGCCCCACCCTGCACTCTCCGCTCAGCCTCATaGGGCTGGTGCAGGTCCACCAGGCTCTGCCCAGTGAAGGCACCT +
Preference number: 5 (lower is better)
Translates to: RILRRAPPCTLRSAS*GWCRSTRLCPVKAP
Trigger: AGGTGCCTTCACTGGGCAGAGCCTGGTGGACCTGCACCAGCCCCATGAGGCTGAGCGGAGAGTGCAGGGTGGGGCCCGCCTGAGGATCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598492.5
CDS GCA 90 bp AGCACCGCCACCATGTTCCGGATGTTGCTCTGGGGGTCGATGGCCTaGAGCAGCCGGTCCCTGATCTGCTGCGGAGACGCCGGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: STATMFRMLLWGSMA*SSRSLICCGDAGAA
Trigger: AGCGGCTCCGGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGGCCATCGACCCCCAGAGCAACATCCGGAACATGGTGGCGGTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000600060.1
ENST00000611692.4
CDS CCA 90 bp CTCAGGCGGGCCCCACCCTGCACTCTCCGCTCAGCCTCATGGGGCTaGTGCAGGTCCACCAGGCTCTGCCCAGTGAAGGCACCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LRRAPPCTLRSASWG*CRSTRLCPVKAPSS
Trigger: AGAGGAAGGTGCCTTCACTGGGCAGAGCCTGGTGGACCTGCACCAGCCCCATGAGGCTGAGCGGAGAGTGCAGGGTGGGGCCCGCCTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598492.5
CDS-3UTR CAA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGCAGGGTCCAGGGGGCTaGCCCAGGCCCGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVQGPGG*PRPGEL
Trigger: CAGCTCCCCGGGCCTGGGCAAGCCCCCTGGACCCTG...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS GCA 90 bp CGCCTCTGGCAGAAGCCGCCCGCCGTAGCTGGGAAAGCCGGAGGTTaGAAATCTGCGTCTACGCGGCGGCTTCTCCACCTCGGCACCACT +
Preference number: 5 (lower is better)
Translates to: RLWQKPPAVAGKAGG*KSASTRRLLHLGTT
Trigger: AGTGGTGCCGAGGTGGAGAAGCCGCCGCGTAGACGCAGATTTGCAACCTCCGGCTTTCCCAGCTACGGCGGGCGGCTTCTGCCAGAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS CCA 90 bp CACGCGCGACCCCGATCGCGAAAACGTGAGGCGGCAAAGCGCCTCTaGCAGAAGCCGCCCGCCGTAGCTGGGAAAGCCGGAGGTTGCAAA +
Preference number: 5 (lower is better)
Translates to: HARPRSRKREAAKRL*QKPPAVAGKAGGCK
Trigger: TTTGCAACCTCCGGCTTTCCCAGCTACGGCGGGCGGCTTCTGCCAGAGGCGCTTTGCCGCCTCACGTTTTCGCGATCGGGGTCGCGCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS-3UTR CAA 90 bp GTGCCAGTGGAAGCGGTGACGGCACCTGTGTGGCATCGAGTGCCTGGGGCCGCGACCATGTTCCGGATGTaGCTCTGGGGGTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: VPVEAVTAPVWHRVPGAATMFRM*LWGSMA
Trigger: GGCCATCGACCCCCAGAGCAACATCCGGAACATGGT...CGCGGCCCCAGGCACTCGATGCCACACAGGTGCCGTCACCGCTTCCACTGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS TCA 90 bp AGGGCGGCGGGAAAATCCTTCCTCTGGGAGAGCCTTCCCGGCGCGTaGCTGGGGGACGGGAGTCGCAGGCTGAGCAGCTGCCGAGTTTTT +
Preference number: 5 (lower is better)
Translates to: RAAGKSFLWESLPGA*LGDGSRRLSSCRVF
Trigger: AAAAACTCGGCAGCTGCTCAGCCTGCGACTCCCGTCCCCCAGTCACGCGCCGGGAAGGCTCTCCCAGAGGAAGGATTTTCCCGCCGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS GCA 90 bp GAGCTGGTGTGCGGTCGCACGGCGTTGACGGGGATCTTGCCACTGTaGTTGTCATTCTCGTCACGCTCCAGGCGGCTGCCCTCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: ELVCGRTALTGILPL*LSFSSRSRRLPSGP
Trigger: AGGCCCAGAGGGCAGCCGCCTGGAGCGTGACGAGAATGACAAGCACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000611692.4
CDS GCA 90 bp TACCTGCTCCCTGGGCCAACCTGGCACCCAGTGCTCATCCTCACCTaGCGTCTGACCTCCTCCAGTGTGTGGTGTGCGGGCTGCCCCAAG +
Preference number: 5 (lower is better)
Translates to: YLLPGPTWHPVLILT*RLTSSSVWCAGCPK
Trigger: CTTGGGGCAGCCCGCACACCACACACTGGAGGAGGTCAGACGGCAGGTGAGGATGAGCACTGGGTGCCAGGTTGGCCCAGGGAGCAGGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CCA 90 bp TTGCAAATCTGCGTCTACGCGGCGGCTTCTCCACCTCGGCACCACTaGCATTTGGGCGGGATCGCTCTGTCTTCGGGGCGGGTCCCCCGA +
Preference number: 5 (lower is better)
Translates to: LQICVYAAASPPRHH*HLGGIALSSGRVPR
Trigger: TCGGGGGACCCGCCCCGAAGACAGAGCGATCCCGCCCAAATGCCAGTGGTGCCGAGGTGGAGAAGCCGCCGCGTAGACGCAGATTTGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS CCA 90 bp GCCACTGTGCTTGTCATTCTCGTCACGCTCCAGGCGGCTGCCCTCTaGGCCTGCATGCCCACTGCCATCCAGGGAGCTTCTTGGCCCGCT +
Preference number: 5 (lower is better)
Translates to: ATVLVILVTLQAAAL*ACMPTAIQGASWPA
Trigger: AGCGGGCCAAGAAGCTCCCTGGATGGCAGTGGGCATGCAGGCCCAGAGGGCAGCCGCCTGGAGCGTGACGAGAATGACAAGCACAGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp GGTGAGGGGCTGGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAGCTTCTTGGCCCGCTaGGCGAGCTCCTCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GEGLGTEPLGAYKLCCRASFLAR*ASSSFL
Trigger: CAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCT...TGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAGCCCCTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp GACGGCTGTGCCAGTGGAAGCGGTGACGGCACCTGTGTGGCATCGAGTGCCTGGGCAGCACCGAAGCCTTaGGCTGCAAGCAGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: DGCASGSGDGTCVASSAWAAPKP*AASRVQ
Trigger: CTGGACCCTGCTTGCAGCCAAAGGCTTCGGTGCTGC...CCAGGCACTCGATGCCACACAGGTGCCGTCACCGCTTCCACTGGCACAGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp GACGGCTGTGCCAGTGGAAGCGGTGACGGCACCTGTGTGGCATCGAGTGCCTGGTTTAACCGGACAGGCTaGACGCCCGCCTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: DGCASGSGDGTCVASSAWFNRTG*TPASAT
Trigger: GGTGGCTGAGGCGGGCGTCAAGCCTGTCCGGTTAAA...CCAGGCACTCGATGCCACACAGGTGCCGTCACCGCTTCCACTGGCACAGCCGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS TCA 90 bp GCTCCCAAGGACGTTTCCCGCTCAGAGCCTGGCAGCTGGAGGCACTaGCACACGCGGCCAGGGCTAGTTCAAGTCCCTCTTTGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: APKDVSRSEPGSWRH*HTRPGLVQVPLCCG
Trigger: CCCGCAGCAAAGAGGGACTTGAACTAGCCCTGGCCGCGTGTGTCAGTGCCTCCAGCTGCCAGGCTCTGAGCGGGAAACGTCCTTGGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS TCA 90 bp GCTCAGCCTCATGGGGCTGGTGCAGGTCCACCAGGCTCTGCCCAGTaGAGGCACCTTCCTCTGAGGGGACCTCATGGGAGCCTCAAACCC +
Preference number: 5 (lower is better)
Translates to: AQPHGAGAGPPGSAQ*RHLPLRGPHGSLKP
Trigger: GGGTTTGAGGCTCCCATGAGGTCCCCTCAGAGGAAGGTGCCTTCACTGGGCAGAGCCTGGTGGACCTGCACCAGCCCCATGAGGCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598492.5
CDS GCA 90 bp TTGTCATTCTCGTCACGCTCCAGGCGGCTGCCCTCTGGGCCTGCATaGCCACTGCCATCCAGGGAGCTGGCGAAGCTCTCTGGACTCCCA +
Preference number: 5 (lower is better)
Translates to: LSFSSRSRRLPSGPA*PLPSRELAKLSGLP
Trigger: TGGGAGTCCAGAGAGCTTCGCCAGCTCCCTGGATGGCAGTGGGCATGCAGGCCCAGAGGGCAGCCGCCTGGAGCGTGACGAGAATGACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS GCA 90 bp GCAGAAGCCGCCCGCCGTAGCTGGGAAAGCCGGAGGTTGCAAATCTaGGTCTACGCGGCGGCTTCTCCACCTCGGCACCACTGGCATTTG +
Preference number: 5 (lower is better)
Translates to: AEAARRSWESRRLQI*VYAAASPPRHHWHL
Trigger: CAAATGCCAGTGGTGCCGAGGTGGAGAAGCCGCCGCGTAGACGCAGATTTGCAACCTCCGGCTTTCCCAGCTACGGCGGGCGGCTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS GCA 90 bp ACTCTCCGCTCAGCCTCATGGGGCTGGTGCAGGTCCACCAGGCTCTaGCCAGTGAAGGCACCTTCCTCTGAGGGGACCTCATGGGAGCCT +
Preference number: 5 (lower is better)
Translates to: TLRSASWGWCRSTRL*PVKAPSSEGTSWEP
Trigger: AGGCTCCCATGAGGTCCCCTCAGAGGAAGGTGCCTTCACTGGGCAGAGCCTGGTGGACCTGCACCAGCCCCATGAGGCTGAGCGGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598492.5
CDS CCA 90 bp GAGGGTGCTGTGGCCGAGGCGACAGCACAGAGGGTCCGCTTCAAGTaGAGGGTTGGGGATGGTGCCTCTCACTGGAGCCTCCTCCAAGCA +
Preference number: 5 (lower is better)
Translates to: EGAVAEATAQRVRFK*RVGDGASHWSLLQA
Trigger: TGCTTGGAGGAGGCTCCAGTGAGAGGCACCATCCCCAACCCTCCACTTGAAGCGGACCCTCTGTGCTGTCGCCTCGGCCACAGCACCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS-3UTR CAA 90 bp TGTCCTGACACCCGTTCACCCCCGGCCACTGGCTGGCCTGGATTCTGTCGAGATTGCGGTCGCACGGCGTaGACGGGGATCTTGCCACTG +
Preference number: 5 (lower is better)
Translates to: CPDTRSPPATGWPGFCRDCGRTA*TGILPL
Trigger: CAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCA...ATCTCGACAGAATCCAGGCCAGCCAGTGGCCGGGGGTGAACGGGTGTCAGGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS GCA 90 bp GGCCACTGTAAGGACACTGCCAGAGAGGCTTCCTGGGTGAGAGGGTaGTGTGGCCGAGGCGACAGCACAGAGGGTCCGCTTCAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: GHCKDTAREASWVRG*CGRGDSTEGPLQVE
Trigger: CTCCACTTGAAGCGGACCCTCTGTGCTGTCGCCTCGGCCACAGCACCCTCTCACCCAGGAAGCCTCTCTGGCAGTGTCCTTACAGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CCA 90 bp GTGGACCATCAAGGCCACTGTAAGGACACTGCCAGAGAGGCTTCCTaGGTGAGAGGGTGCTGTGGCCGAGGCGACAGCACAGAGGGTCCG +
Preference number: 5 (lower is better)
Translates to: VDHQGHCKDTAREAS*VRGCCGRGDSTEGP
Trigger: CGGACCCTCTGTGCTGTCGCCTCGGCCACAGCACCCTCTCACCCAGGAAGCCTCTCTGGCAGTGTCCTTACAGTGGCCTTGATGGTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS-3UTR CAA 90 bp TTGCCCAGGCCCGGGGAGCTGGTGTGCGGTCGCACGGCGTTGACGGGGATCTTGTTCTTGCGGACGTCGTaGATGAGCTTCCCAAGTCGT +
Preference number: 5 (lower is better)
Translates to: LPRPGELVCGRTALTGILFLRTS*MSFPSR
Trigger: ACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAA...CAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp GGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCATGCCGTGAGTTCCGAGTCCGTGGGCGGGCTTaGAGGCACCAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: GAYKLCCRAKEPSCREFRVRGRA*RHQHMQ
Trigger: CTGCATGTGCTGGTGCCTCAAAGCCCGCCCACGGAC...TCGGAACTCACGGCATGAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS TCA 90 bp GGGGATGGTGCCTCTCACTGGAGCCTCCTCCAAGCACACCTCTCCTaGTGTCCCCACGTGCCCACGAAGTGTGCTGGGCATGTAGGATGG +
Preference number: 5 (lower is better)
Translates to: GDGASHWSLLQAHLS*CPHVPTKCAGHVGW
Trigger: CCATCCTACATGCCCAGCACACTTCGTGGGCACGTGGGGACATCAGGAGAGGTGTGCTTGGAGGAGGCTCCAGTGAGAGGCACCATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 90 bp CTGCCCACCTGCCTGCCCGCCCACCCGGCTTCTGCAAGATGGGAATaGACTTTGTGGCTGACAGGCCGGTCAGTCCAAGCAGACATAAGG +
Preference number: 5 (lower is better)
Translates to: LPTCLPAHPASARWE*TLWLTGRSVQADIR
Trigger: CCTTATGTCTGCTTGGACTGACCGGCCTGTCAGCCACAAAGTGCATTCCCATCTTGCAGAAGCCGGGTGGGCGGGCAGGCAGGTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS GCA 90 bp ATCCTCACCTGCCGTCTGACCTCCTCCAGTGTGTGGTGTGCGGGCTaGCCCAAGCCCTCCAGTGTACATGGTACATACCCACCCACCTGC +
Preference number: 5 (lower is better)
Translates to: ILTCRLTSSSVWCAG*PKPSSVHGTYPPTC
Trigger: GCAGGTGGGTGGGTATGTACCATGTACACTGGAGGGCTTGGGGCAGCCCGCACACCACACACTGGAGGAGGTCAGACGGCAGGTGAGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 90 bp GGCGACAGCACAGAGGGTCCGCTTCAAGTGGAGGGTTGGGGATGGTaGCTCTCACTGGAGCCTCCTCCAAGCACACCTCTCCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: GDSTEGPLQVEGWGW*LSLEPPPSTPLLMS
Trigger: GGACATCAGGAGAGGTGTGCTTGGAGGAGGCTCCAGTGAGAGGCACCATCCCCAACCCTCCACTTGAAGCGGACCCTCTGTGCTGTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS-3UTR CAA 90 bp GGGCACGGAGCCCTTGGGTGCATACAAGCTCTGCTGCCGGGCAAAGGAGCCCTCGCGTTGACGGGGATCTaGCCACTGTGCTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: GHGALGCIQALLPGKGALALTGI*PLCLSF
Trigger: GAATGACAAGCACAGTGGCAAGATCCCCGTCAACGC...GAGGGCTCCTTTGCCCGGCAGCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGGCCTTGGCCTCCTGCTaGTCCAGCTCTGTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVALASC*SSSVLD
Trigger: GTCCAGGACAGAGCTGGACAAGCAGGAGGCCAAGGC...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp ATGGGGTCAAAGGTGAGCTTCCGCTCTTTTAACCGGACAGGCTTGACGCCCGCCCATCCAGGGAGCTTCTaGGCCCGCTTGGCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: MGSKVSFRSFNRTGLTPAHPGSF*ARLASS
Trigger: GGAGCTCGCCAAGCGGGCCAAGAAGCTCCCTGGATG...GGCGGGCGTCAAGCCTGTCCGGTTAAAAGAGCGGAAGCTCACCTTTGACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS TCA 90 bp CAAGTCCCTCTTTGCTGCGGGACCTTCTCAGGCCTCTCCCTGGTCTaGACACAGGGCATTCACCTGCAGCTAGCAAGCCCTGCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: QVPLCCGTFSGLSLV*TQGIHLQLASPALC
Trigger: GCACAGGGCAGGGCTTGCTAGCTGCAGGTGAATGCCCTGTGTTCAGACCAGGGAGAGGCCTGAGAAGGTCCCGCAGCAAAGAGGGACTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS CCA 90 bp CACCCAGTGCTCATCCTCACCTGCCGTCTGACCTCCTCCAGTGTGTaGTGTGCGGGCTGCCCCAAGCCCTCCAGTGTACATGGTACATAC +
Preference number: 5 (lower is better)
Translates to: HPVLILTCRLTSSSV*CAGCPKPSSVHGTY
Trigger: GTATGTACCATGTACACTGGAGGGCTTGGGGCAGCCCGCACACCACACACTGGAGGAGGTCAGACGGCAGGTGAGGATGAGCACTGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 90 bp AACCTAGTTCCCAGACCTTCAGGGTCCCAGGTGGCTTCTCAGCAGTaGTGTCACCCAGGCTCCTGGTGTCAGGGGGCTGTGGACCATCAA +
Preference number: 5 (lower is better)
Translates to: NLVPRPSGSQVASQQ*CHPGSWCQGAVDHQ
Trigger: TTGATGGTCCACAGCCCCCTGACACCAGGAGCCTGGGTGACAGCACTGCTGAGAAGCCACCTGGGACCCTGAAGGTCTGGGAACTAGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CCA 90 bp CTCCAGTGTGTGGTGTGCGGGCTGCCCCAAGCCCTCCAGTGTACATaGTACATACCCACCCACCTGCTGAAACCCAGGATGCCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LQCVVCGLPQALQCT*YIPTHLLKPRMPVE
Trigger: TTCCACAGGCATCCTGGGTTTCAGCAGGTGGGTGGGTATGTACCATGTACACTGGAGGGCTTGGGGCAGCCCGCACACCACACACTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CCA 90 bp GAGCAAGATCGCGAGGCACGAGCTGTGAGGGCACACCGCCTCTCTTaGTCCTCCGAAGCAAAGACACTGATGCTCCCAGAAGCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: EQDREARAVRAHRLS*SSEAKTLMLPEAAE
Trigger: TTCCGCAGCTTCTGGGAGCATCAGTGTCTTTGCTTCGGAGGACCAAGAGAGGCGGTGTGCCCTCACAGCTCGTGCCTCGCGATCTTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CCA 90 bp CTTCTCAGCAGTGCTGTCACCCAGGCTCCTGGTGTCAGGGGGCTGTaGACCATCAAGGCCACTGTAAGGACACTGCCAGAGAGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LLSSAVTQAPGVRGL*TIKATVRTLPERLP
Trigger: AGGAAGCCTCTCTGGCAGTGTCCTTACAGTGGCCTTGATGGTCCACAGCCCCCTGACACCAGGAGCCTGGGTGACAGCACTGCTGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 90 bp GAAGTGTGCTGGGCATGTAGGATGGGAGTAACACCACTTGGTCTCTaGAGTGCCCGTGGGAGAGCAAGATCGCGAGGCACGAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: EVCWACRMGVTPLGL*SARGRARSRGTSCE
Trigger: CTCACAGCTCGTGCCTCGCGATCTTGCTCTCCCACGGGCACTGCAGAGACCAAGTGGTGTTACTCCCATCCTACATGCCCAGCACACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS-3UTR CAA 90 bp GCTCTCCTCCTGCTTCAGGTACTCAGACATGAAGTGGTGAGCCCCTGGGGTCTGGCGAGCTCCTCGTTCTaGGTTTTCTTGCGGACGTCG +
Preference number: 5 (lower is better)
Translates to: ALLLLQVLRHEVVSPWGLASSSF*VFLRTS
Trigger: CGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGC...CAGACCCCAGGGGCTCACCACTTCATGTCTGAGTACCTGAAGCAGGAGGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp CCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGTAGCAGCATGGTCACCCCGGCGCTaGCGGCTGCCCAGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: PSFHAVLLRNFVSKLVAAWSPRR*RLPSLS
Trigger: GGACAGGCTGGGCAGCCGCAAGCGCCGGGGTGACCA...TGCTGCTACCAGTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTCAGGGTCCAGGGGGCTaGCCCAGGCCCGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPQGPGG*PRPGEL
Trigger: CAGCTCCCCGGGCCTGGGCAAGCCCCCTGGACCCTG...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTGTCCGTGGGCGGGCTTaGAGGCACCAGCACATGCAG +
Preference number: 5 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSVRGRA*RHQHMQ
Trigger: CTGCATGTGCTGGTGCCTCAAAGCCCGCCCACGGAC...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS CCA 90 bp TGCCTGCCCGCCCACCCGGCTTCTGCAAGATGGGAATGCACTTTGTaGCTGACAGGCCGGTCAGTCCAAGCAGACATAAGGCAGAATGTT +
Preference number: 5 (lower is better)
Translates to: CLPAHPASARWECTL*LTGRSVQADIRQNV
Trigger: AACATTCTGCCTTATGTCTGCTTGGACTGACCGGCCTGTCAGCCACAAAGTGCATTCCCATCTTGCAGAAGCCGGGTGGGCGGGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CCA 90 bp TGTGAAAAAGAAAGCAGCTCCCAAGGACGTTTCCCGCTCAGAGCCTaGCAGCTGGAGGCACTGACACACGCGGCCAGGGCTAGTTCAAGT +
Preference number: 5 (lower is better)
Translates to: CEKESSSQGRFPLRA*QLEALTHAARASSS
Trigger: ACTTGAACTAGCCCTGGCCGCGTGTGTCAGTGCCTCCAGCTGCCAGGCTCTGAGCGGGAAACGTCCTTGGGAGCTGCTTTCTTTTTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS-3UTR CAA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCGGGTCGTGGCTAGCTTaGGAGACCTTGGGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRGSWLA*ETLGGG
Trigger: GCCGCCACCCAAGGTCTCCAAAGCTAGCCACGACCC...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp TATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGACACCCGTTCACCTGGGCACGGAGCCCTaGGGTGCATACAAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: YALRPVIPVTLCVLTPVHLGTEP*GAYKLC
Trigger: GCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAG...GTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp ATTCTGTCGAGATCGTCCTGTGTGACCTCCCGGGTCAGACCAGGGAGGTCCGTGTTCTGGGTCAGAGGTTaGATCTGTCTCGTCATGGGG +
Preference number: 5 (lower is better)
Translates to: ILSRSSCVTSRVRPGRSVFWVRG*ICLVMG
Trigger: CCCCATGACGAGACAGATCAAACCTCTGACCCAGAA...CACGGACCTCCCTGGTCTGACCCGGGAGGTCACACAGGACGATCTCGACAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS TCA 90 bp GTGCCTCGGTCACCTCTCCCTTGGTCTCTGTTGCCTGAAGAGCTGTaGAAAAGAAAGCAGCTCCCAAGGACGTTTCCCGCTCAGAGCCTG +
Preference number: 5 (lower is better)
Translates to: VPRSPLPWSLLPEEL*KRKQLPRTFPAQSL
Trigger: CAGGCTCTGAGCGGGAAACGTCCTTGGGAGCTGCTTTCTTTTTCACAGCTCTTCAGGCAACAGAGACCAAGGGAGAGGTGACCGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS-3UTR CAA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACCTCCGCAGCAGCTTCTaGGCCCGCTTGGCGAGCTCC +
Preference number: 5 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNLRSSF*ARLASS
Trigger: GGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAG...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAAACCTCCGGCCGGCAGTaGTGTGCGCCCCCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKTSGRQ*CAPPLA
Trigger: TGCCAACGGGGGCGCACACAACTGCCGGCCGGAGGT...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCGCCTTGGCCTCCTGCTaGTCCAGCTCTGTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRALASC*SSSVLD
Trigger: GTCCAGGACAGAGCTGGACAAGCAGGAGGCCAAGGC...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS TCA 90 bp TCTCTGCAGAGTGCCTCGGTCACCTCTCCCTTGGTCTCTGTTGCCTaGAGAGCTGTGAAAAAGAAAGCAGCTCCCAAGGACGTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: SLQSASVTSPLVSVA*RAVKKKAAPKDVSR
Trigger: GCGGGAAACGTCCTTGGGAGCTGCTTTCTTTTTCACAGCTCTTCAGGCAACAGAGACCAAGGGAGAGGTGACCGAGGCACTCTGCAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS-3UTR CAA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTAGCCTCTGGAGGTCATaGCGGCTCTTCAGGTCATGG +
Preference number: 5 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSSLWRS*RLFRSW
Trigger: CCATGACCTGAAGAGCCGCAATGACCTCCAGAGGCT...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCCTAGCTTTGGAGACCTaGGGTGGCGGCCCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVLALET*GGGPGW
Trigger: CCACCCAGGGCCGCCACCCAAGGTCTCCAAAGCTAG...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCTGCGGTCGCACGGCGTaGACGGGGATCTTGCCACTG +
Preference number: 5 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVCGRTA*TGILPL
Trigger: CAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCA...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAATTCTTGCGGACGTCGTaGATGAGCTTCCCAAGTCGT +
Preference number: 5 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKFLRTS*MSFPSR
Trigger: ACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAA...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTTGTGTGCGCCCCCGTaGGCAGAGCCGGTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVLCAPP*AEPVAP
Trigger: GGGGGCCACCGGCTCTGCCAACGGGGGCGCACACAA...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp GCGGATCGAGCGATATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTATCTTGCCACTGTGCTaGTCATTCTCGTCACGCTCC +
Preference number: 5 (lower is better)
Translates to: ADRAICTASSHTSYPVCPILPLC*SFSSRS
Trigger: GGAGCGTGACGAGAATGACAAGCACAGTGGCAAGAT...AGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATATCGCTCGATCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp CTCACCACAGCTGAGAAGCTTCTGGCACATGACAGACAACACTGGCCTGACAGTGCGTTGACGGGGATCTaGCCACTGTGCTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: LTTAEKLLAHDRQHWPDSALTGI*PLCLSF
Trigger: GAATGACAAGCACAGTGGCAAGATCCCCGTCAACGC...ACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAGCTTCTCAGCTGTGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp ATCACAAGGTGTCCACTTACTGGACCAAATAGCAAAGTTGCTCCCTTCTGCGTCTTTAACCGGACAGGCTaGACGCCCGCCTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: ITRCPLTGPNSKVAPFCVFNRTG*TPASAT
Trigger: GGTGGCTGAGGCGGGCGTCAAGCCTGTCCGGTTAAA...GACGCAGAAGGGAGCAACTTTGCTATTTGGTCCAGTAAGTGGACACCTTGTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp TATGCACTGCGTCCAGTCATACCAGTTACCCTGTGTGTCCTGACACCCGTTCACGACTGGATGATCTCGTaGCGTGACAGCTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: YALRPVIPVTLCVLTPVHDWMIS*RDSSFQ
Trigger: CTGGAAGGAGCTGTCACGCAACGAGATCATCCAGTC...GTGAACGGGTGTCAGGACACACAGGGTAACTGGTATGACTGGACGCAGTGCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS-3UTR CAA 90 bp CTTCTGGCACATGACAGACAACACTGGCCTGACAGTGGCTGGGTAGGGAGCAAAAGTTCTGAACTCACTTaGCCGTCCTTCCTTCCACGC +
Preference number: 5 (lower is better)
Translates to: LLAHDRQHWPDSGWVGSKSSELT*PSFLPR
Trigger: GCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACT...TTTGCTCCCTACCCAGCCACTGTCAGGCCAGTGTTGTCTGTCATGTGCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp TCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACTGGGCACGGAGCCCTaGGGTGCATACAAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SLCRPSFHAVLLRNFVSKLGTEP*GAYKLC
Trigger: GCAGAGCTTGTATGCACCCAAGGGCTCCGTGCCCAG...TTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp TATAGAGTTCTGAACTCACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAGATGGGAATGCACTTaGTGGCTGACAGGCCGGTCA +
Preference number: 5 (lower is better)
Translates to: YRVLNSLCRPSFHAVLLRRWECT*WLTGRS
Trigger: TGACCGGCCTGTCAGCCACAAAGTGCATTCCCATCT...GCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTGAGTTCAGAACTCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS TCA 90 bp CCTGCAGCTAGCAAGCCCTGCCCTGTGCGGTTATTTTACTTGCCATaGGGATGCAGTACACCGTCTACTATTCGTCGGACCTTTCCTCTA +
Preference number: 5 (lower is better)
Translates to: PAASKPCPVRLFYLP*GCSTPSTIRRTFPL
Trigger: TAGAGGAAAGGTCCGACGAATAGTAGACGGTGTACTGCATCCTCATGGCAAGTAAAATAACCGCACAGGGCAGGGCTTGCTAGCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS GCA 90 bp CGTTCTGCCCTCCCAAATGCTGGGGTCTGGGATACTCACCTCAAGTaGCTCTTTGGTAATAGGGTATTTCTCCAGGCTGGAGATGACTTC +
Preference number: 5 (lower is better)
Translates to: RSALPNAGVWDTHLK*LFGNRVFLQAGDDF
Trigger: GAAGTCATCTCCAGCCTGGAGAAATACCCTATTACCAAAGAGGCACTTGAGGTGAGTATCCCAGACCCCAGCATTTGGGAGGGCAGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000597244.1
ENST00000600060.1
CDS GCA 90 bp ATTCACCTGCAGCTAGCAAGCCCTGCCCTGTGCGGTTATTTTACTTaGCATGAGGATGCAGTACACCGTCTACTATTCGTCGGACCTTTC +
Preference number: 5 (lower is better)
Translates to: IHLQLASPALCGYFT*HEDAVHRLLFVGPF
Trigger: GAAAGGTCCGACGAATAGTAGACGGTGTACTGCATCCTCATGGCAAGTAAAATAACCGCACAGGGCAGGGCTTGCTAGCTGCAGGTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS-3UTR CAA 90 bp GAATCTAAAGGAATGGTTATGAGTGTTTCCAGCGTACAGACAGGTCTTCCCCCTGCGAGCTCCTCGTTCTaGGTTTTCTTGCGGACGTCG +
Preference number: 5 (lower is better)
Translates to: ESKGMVMSVSSVQTGLPPASSSF*VFLRTS
Trigger: CGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGC...AGGGGGAAGACCTGTCTGTACGCTGGAAACACTCATAACCATTCCTTTAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp CACTTTGCCGTCCTTCCTTCCACGCGGTCCTTCTTCGCAATTTTGTTAGTAAACGACTGGATGATCTCGTaGCGTGACAGCTCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: HFAVLPSTRSFFAILLVNDWMIS*RDSSFQ
Trigger: CTGGAAGGAGCTGTCACGCAACGAGATCATCCAGTC...GTTTACTAACAAAATTGCGAAGAAGGACCGCGTGGAAGGAAGGACGGCAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTGCAGCACCGAAGCCTTaGGCTGCAAGCAGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVAAPKP*AASRVQ
Trigger: CTGGACCCTGCTTGCAGCCAAAGGCTTCGGTGCTGC...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS TCA 90 bp GCCAGCTTCCCTGACACAAAACTTCTGGGGATTTCCGGTCCTTTGTaGCAATATAAATTCTCAAACCTAGTTCCCAGACCTTCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: ASFPDTKLLGISGPL*QYKFSNLVPRPSGS
Trigger: GGACCCTGAAGGTCTGGGAACTAGGTTTGAGAATTTATATTGTCACAAAGGACCGGAAATCCCCAGAAGTTTTGTGTCAGGGAAGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS-3UTR CAA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAAACCATGTTCCGGATGTaGCTCTGGGGGTCGATGGCC +
Preference number: 5 (lower is better)
Translates to: GSLFLQIAFMTNNHKANETMFRM*LWGSMA
Trigger: GGCCATCGACCCCCAGAGCAACATCCGGAACATGGT...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp GGCTCCTTGTTTTTGCAAATCGCGTTTATGACAAATAACCATAAGGCAAACGAAAGCTTCTTGGCCCGCTaGGCGAGCTCCTCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: GSLFLQIAFMTNNHKANESFLAR*ASSSFL
Trigger: CAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCT...TTCGTTTGCCTTATGGTTATTTGTCATAAACGCGATTTGCAAAAACAAGGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp AGAAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTTCTGGGTCAGAGGTTaGATCTGTCTCGTCATGGGG +
Preference number: 5 (lower is better)
Translates to: RSLGTVHSLRLLVFANRVFWVRG*ICLVMG
Trigger: CCCCATGACGAGACAGATCAAACCTCTGACCCAGAA...AACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTAATCTTGCCACTGTGCTaGTCATTCTCGTCACGCTCC +
Preference number: 5 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLILPLC*SFSSRS
Trigger: GGAGCGTGACGAGAATGACAAGCACAGTGGCAAGAT...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS-3UTR CAA 90 bp AAGTCTAGGTACTGTACATTCACTAAGGCTCCTTGTTTTTGCAAATCGCGTTTATCGTTCTTGGTTTTCTaGCGGACGTCGTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: KSRYCTFTKAPCFCKSRLSFLVF*RTSLMS
Trigger: GCTCATCAACGACGTCCGCAAGAAAACCAAGAACGA...TAAACGCGATTTGCAAAAACAAGGAGCCTTAGTGAATGTACAGTACCTAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263390.8
CDS GCA 72 bp GGCCGAGGTCACGCTGGTCACCCCGGCGCTTGCGGCTaGCCAGCCTGTCCAGCCGCTGCCCGGGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: GRGHAGHPGACG*PACPAAARAAS
Trigger: AGAGGCTGCCCGGGCAGCGGCTGGACAGGCTGGGCAGCCGCAAGCGCCGGGGTGACCAGCGTGACCTCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CCA 72 bp ACCTTGGGTGGCGGCCCTGGGTGGCCGAGGTCACGCTaGTCACCCCGGCGCTTGCGGCTGCCCAGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: TLGGGPGWPRSR*SPRRLRLPSLS
Trigger: GGACAGGCTGGGCAGCCGCAAGCGCCGGGGTGACCAGCGTGACCTCGGCCACCCAGGGCCGCCACCCAAGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS GCA 72 bp CCCCGGCGCTTGCGGCTGCCCAGCCTGTCCAGCCGCTaGCCGGGCAGCCTCTGGAGGTCATTGCGGCTCTTC +
Preference number: 6 (lower is better)
Translates to: PRRLRLPSLSSR*PGSLWRSLRLF
Trigger: GAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGCAGCGGCTGGACAGGCTGGGCAGCCGCAAGCGCCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS TCA 72 bp TCTGCACCGCCACGCGCGACCCCGATCGCGAAAACGTaGGGCGGCAAAGCGCCTCTGGCAGAAGCCGCCCGC +
Preference number: 6 (lower is better)
Translates to: SAPPRATPIAKT*GGKAPLAEAAR
Trigger: GCGGGCGGCTTCTGCCAGAGGCGCTTTGCCGCCTCACGTTTTCGCGATCGGGGTCGCGCGTGGCGGTGCAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS GCA 72 bp GGGTCGATGGCCTGCAGCAGCCGGTCCCTGATCTGCTaGGGAGACGCCGGAGCCGCTGTCATTGCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: GSMACSSRSLIC*GDAGAAVIAWA
Trigger: CGCCCAGGCAATGACAGCGGCTCCGGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGGCCATCGACCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000600060.1
CDS GCA 72 bp GCTCCAGGCGGCTGCCCTCTGGGCCTGCATGCCCACTaGCATCCAGGGAGCTTCTTGGCCCGCTTGGCGAGC +
Preference number: 6 (lower is better)
Translates to: APGGCPLGLHAH*HPGSFLARLAS
Trigger: GCTCGCCAAGCGGGCCAAGAAGCTCCCTGGATGGCAGTGGGCATGCAGGCCCAGAGGGCAGCCGCCTGGAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS CCA 72 bp TGGCTAGCTTTGGAGACCTTGGGTGGCGGCCCTGGGTaGCCGAGGTCACGCTGGTCACCCCGGCGCTTGCGG +
Preference number: 6 (lower is better)
Translates to: WLALETLGGGPG*PRSRWSPRRLR
Trigger: CCGCAAGCGCCGGGGTGACCAGCGTGACCTCGGCCACCCAGGGCCGCCACCCAAGGTCTCCAAAGCTAGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CAA 90 bp CTGCCCAGCCTGTCCAGCCGCTGCCCGGGCAGCCTCTGGAGGTCATaGCGGCTCTTCAGGTCATGGATGCTCCTGGGTGGGCCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: LPSLSSRCPGSLWRS*RLFRSWMLLGGPAA
Trigger: GGCGGCTGGCCCACCCAGGAGCATCCATGACCTGAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGCAGCGGCTGGACAGGCTGGGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS TCA 72 bp CCCGCAGCGCCGCCTCATGCTGGTGTGCCGGCTCGATaGGCTTCTGCCAGCTCCGCAGCAGCTTCTTGGCCC +
Preference number: 6 (lower is better)
Translates to: PAAPPHAGVPAR*ASASSAAASWP
Trigger: GGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCCGGCACACCAGCATGAGGCGGCGCTGCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
CDS GCA 72 bp TGGGGGTCGATGGCCTGCAGCAGCCGGTCCCTGATCTaGTGCGGAGACGCCGGAGCCGCTGTCATTGCCTGG +
Preference number: 6 (lower is better)
Translates to: WGSMACSSRSLI*CGDAGAAVIAW
Trigger: CCAGGCAATGACAGCGGCTCCGGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGGCCATCGACCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000600060.1
CDS CCA 72 bp GTCGTGGCTAGCTTTGGAGACCTTGGGTGGCGGCCCTaGGTGGCCGAGGTCACGCTGGTCACCCCGGCGCTT +
Preference number: 6 (lower is better)
Translates to: VVASFGDLGWRP*VAEVTLVTPAL
Trigger: AAGCGCCGGGGTGACCAGCGTGACCTCGGCCACCCAGGGCCGCCACCCAAGGTCTCCAAAGCTAGCCACGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CAA 72 bp TTGGGGACCAGGGGGTCGTGGCTAGCTTTGGAGACCTaGGGTGGCGGCCCTGGGTGGCCGAGGTCACGCTGG +
Preference number: 6 (lower is better)
Translates to: LGTRGSWLALET*GGGPGWPRSRW
Trigger: CCAGCGTGACCTCGGCCACCCAGGGCCGCCACCCAAGGTCTCCAAAGCTAGCCACGACCCCCTGGTCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CAA 72 bp TACGCGGCGGCTTCTCCACCTCGGCACCACTGGCATTaGGGCGGGATCGCTCTGTCTTCGGGGCGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: YAAASPPRHHWH*GGIALSSGRVP
Trigger: GGGGACCCGCCCCGAAGACAGAGCGATCCCGCCCAAATGCCAGTGGTGCCGAGGTGGAGAAGCCGCCGCGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS CAA 90 bp AGGCCCGGGGAGCTGGTGTGCGGTCGCACGGCGTTGACGGGGATCTaGCCACTGTGCTTGTCATTCTCGTCACGCTCCAGGCGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RPGELVCGRTALTGI*PLCLSFSSRSRRLP
Trigger: GGGCAGCCGCCTGGAGCGTGACGAGAATGACAAGCACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000611692.4
CDS TCA 72 bp TGCTCTGGGGGTCGATGGCCTGCAGCAGCCGGTCCCTaGTCTGCTGCGGAGACGCCGGAGCCGCTGTCATTG +
Preference number: 6 (lower is better)
Translates to: CSGGRWPAAAGP*SAAETPEPLSL
Trigger: CAATGACAGCGGCTCCGGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGGCCATCGACCCCCAGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000600060.1
CDS GCA 72 bp TCGTCACGCTCCAGGCGGCTGCCCTCTGGGCCTGCATaGCCACTGCCATCCAGGGAGCTTCTTGGCCCGCTT +
Preference number: 6 (lower is better)
Translates to: SSRSRRLPSGPA*PLPSRELLGPL
Trigger: AAGCGGGCCAAGAAGCTCCCTGGATGGCAGTGGGCATGCAGGCCCAGAGGGCAGCCGCCTGGAGCGTGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS CCA 72 bp GTCATTGCGGCTCTTCAGGTCATGGATGCTCCTGGGTaGGCCAGCCGCCCCCACCTCCGGCCGGCAGTTGTG +
Preference number: 6 (lower is better)
Translates to: VIAALQVMDAPG*ASRPHLRPAVV
Trigger: CACAACTGCCGGCCGGAGGTGGGGGCGGCTGGCCCACCCAGGAGCATCCATGACCTGAAGAGCCGCAATGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
CDS CCA 72 bp CCCCGATCGCGAAAACGTGAGGCGGCAAAGCGCCTCTaGCAGAAGCCGCCCGCCGTAGCTGGGAAAGCCGGA +
Preference number: 6 (lower is better)
Translates to: PRSRKREAAKRL*QKPPAVAGKAG
Trigger: TCCGGCTTTCCCAGCTACGGCGGGCGGCTTCTGCCAGAGGCGCTTTGCCGCCTCACGTTTTCGCGATCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS CAA 90 bp ATCTGCGTCTACGCGGCGGCTTCTCCACCTCGGCACCACTGGCATTaGGGCGGGATCGCTCTGTCTTCGGGGCGGGTCCCCCGATCTGTC +
Preference number: 6 (lower is better)
Translates to: ICVYAAASPPRHHWH*GGIALSSGRVPRSV
Trigger: GACAGATCGGGGGACCCGCCCCGAAGACAGAGCGATCCCGCCCAAATGCCAGTGGTGCCGAGGTGGAGAAGCCGCCGCGTAGACGCAGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS GCA 72 bp TGTCCAGCCGCTGCCCGGGCAGCCTCTGGAGGTCATTaGGGCTCTTCAGGTCATGGATGCTCCTGGGTGGGC +
Preference number: 6 (lower is better)
Translates to: CPAAARAASGGH*GSSGHGCSWVG
Trigger: GCCCACCCAGGAGCATCCATGACCTGAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGCAGCGGCTGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS GCA 72 bp CCTGGGCCAACCTGGCACCCAGTGCTCATCCTCACCTaGCGTCTGACCTCCTCCAGTGTGTGGTGTGCGGGC +
Preference number: 6 (lower is better)
Translates to: PGPTWHPVLILT*RLTSSSVWCAG
Trigger: GCCCGCACACCACACACTGGAGGAGGTCAGACGGCAGGTGAGGATGAGCACTGGGTGCCAGGTTGGCCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 72 bp GCCCGCCGTAGCTGGGAAAGCCGGAGGTTGCAAATCTaGGTCTACGCGGCGGCTTCTCCACCTCGGCACCAC +
Preference number: 6 (lower is better)
Translates to: ARRSWESRRLQI*VYAAASPPRHH
Trigger: GTGGTGCCGAGGTGGAGAAGCCGCCGCGTAGACGCAGATTTGCAACCTCCGGCTTTCCCAGCTACGGCGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS CCA 72 bp CTGCCCAGCCTGTCCAGCCGCTGCCCGGGCAGCCTCTaGAGGTCATTGCGGCTCTTCAGGTCATGGATGCTC +
Preference number: 6 (lower is better)
Translates to: LPSLSSRCPGSL*RSLRLFRSWML
Trigger: GAGCATCCATGACCTGAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGCAGCGGCTGGACAGGCTGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CAA 72 bp CTGTCCAGCCGCTGCCCGGGCAGCCTCTGGAGGTCATaGCGGCTCTTCAGGTCATGGATGCTCCTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: LSSRCPGSLWRS*RLFRSWMLLGG
Trigger: CCCACCCAGGAGCATCCATGACCTGAAGAGCCGCAATGACCTCCAGAGGCTGCCCGGGCAGCGGCTGGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CAA 90 bp CTGGTGTGCGGTCGCACGGCGTTGACGGGGATCTTGCCACTGTGCTaGTCATTCTCGTCACGCTCCAGGCGGCTGCCCTCTGGGCCTGCA +
Preference number: 6 (lower is better)
Translates to: LVCGRTALTGILPLC*SFSSRSRRLPSGPA
Trigger: TGCAGGCCCAGAGGGCAGCCGCCTGGAGCGTGACGAGAATGACAAGCACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCACACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000611692.4
CDS TCA 72 bp CCAGGCCCGGGGAGCTGGTGTGCGGTCGCACGGCGTTaGCGGGGATCTTGCCACTGTGCTTGTCATTCTCGT +
Preference number: 6 (lower is better)
Translates to: PGPGSWCAVARR*RGSCHCACHSR
Trigger: ACGAGAATGACAAGCACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTCCCCGGGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000611692.4
CDS GCA 72 bp ACCATGTTCCGGATGTTGCTCTGGGGGTCGATGGCCTaGAGCAGCCGGTCCCTGATCTGCTGCGGAGACGCC +
Preference number: 6 (lower is better)
Translates to: TMFRMLLWGSMA*SSRSLICCGDA
Trigger: GGCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGGCCATCGACCCCCAGAGCAACATCCGGAACATGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000600060.1
ENST00000611692.4
CDS GCA 72 bp TGCGGTCGCACGGCGTTGACGGGGATCTTGCCACTGTaGTTGTCATTCTCGTCACGCTCCAGGCGGCTGCCC +
Preference number: 6 (lower is better)
Translates to: CGRTALTGILPL*LSFSSRSRRLP
Trigger: GGGCAGCCGCCTGGAGCGTGACGAGAATGACAAGCACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000611692.4
CDS GCA 72 bp CAGAAGCCGCCCGCCGTAGCTGGGAAAGCCGGAGGTTaGAAATCTGCGTCTACGCGGCGGCTTCTCCACCTC +
Preference number: 6 (lower is better)
Translates to: QKPPAVAGKAGG*KSASTRRLLHL
Trigger: GAGGTGGAGAAGCCGCCGCGTAGACGCAGATTTGCAACCTCCGGCTTTCCCAGCTACGGCGGGCGGCTTCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS CCA 72 bp GAAAGCAGCTCCCAAGGACGTTTCCCGCTCAGAGCCTaGCAGCTGGAGGCACTGACACACGCGGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: ESSSQGRFPLRA*QLEALTHAARA
Trigger: AGCCCTGGCCGCGTGTGTCAGTGCCTCCAGCTGCCAGGCTCTGAGCGGGAAACGTCCTTGGGAGCTGCTTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS CCA 72 bp GGCAAAGCGCCTCTGGCAGAAGCCGCCCGCCGTAGCTaGGAAAGCCGGAGGTTGCAAATCTGCGTCTACGCG +
Preference number: 6 (lower is better)
Translates to: GKAPLAEAARRS*ESRRLQICVYA
Trigger: CGCGTAGACGCAGATTTGCAACCTCCGGCTTTCCCAGCTACGGCGGGCGGCTTCTGCCAGAGGCGCTTTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598608.1
CDS TCA 72 bp TGCCCGTGGGAGAGCAAGATCGCGAGGCACGAGCTGTaGGGGCACACCGCCTCTCTTGGTCCTCCGAAGCAA +
Preference number: 6 (lower is better)
Translates to: CPWESKIARHEL*GHTASLGPPKQ
Trigger: TTGCTTCGGAGGACCAAGAGAGGCGGTGTGCCCTCACAGCTCGTGCCTCGCGATCTTGCTCTCCCACGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 72 bp AAGGACACTGCCAGAGAGGCTTCCTGGGTGAGAGGGTaGTGTGGCCGAGGCGACAGCACAGAGGGTCCGCTT +
Preference number: 6 (lower is better)
Translates to: KDTAREASWVRG*CGRGDSTEGPL
Trigger: AAGCGGACCCTCTGTGCTGTCGCCTCGGCCACAGCACCCTCTCACCCAGGAAGCCTCTCTGGCAGTGTCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 72 bp TCAGCCTCATGGGGCTGGTGCAGGTCCACCAGGCTCTaGCCAGTGAAGGCACCTTCCTCTGAGGGGACCTCA +
Preference number: 6 (lower is better)
Translates to: SASWGWCRSTRL*PVKAPSSEGTS
Trigger: TGAGGTCCCCTCAGAGGAAGGTGCCTTCACTGGGCAGAGCCTGGTGGACCTGCACCAGCCCCATGAGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598492.5
CDS CCA 72 bp CTTGTCATTCTCGTCACGCTCCAGGCGGCTGCCCTCTaGGCCTGCATGCCCACTGCCATCCAGGGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: LVILVTLQAAAL*ACMPTAIQGAS
Trigger: AGAAGCTCCCTGGATGGCAGTGGGCATGCAGGCCCAGAGGGCAGCCGCCTGGAGCGTGACGAGAATGACAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS CAA 72 bp GGTCGCACGGCGTTGACGGGGATCTTGCCACTGTGCTaGTCATTCTCGTCACGCTCCAGGCGGCTGCCCTCT +
Preference number: 6 (lower is better)
Translates to: GRTALTGILPLC*SFSSRSRRLPS
Trigger: AGAGGGCAGCCGCCTGGAGCGTGACGAGAATGACAAGCACAGTGGCAAGATCCCCGTCAACGCCGTGCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000611692.4
CDS CAA 90 bp TGGTGTGCCGGCTCGATGAGCTTCTGCCAGCTCCGCAGCAGCTTCTaGGCCCGCTTGGCGAGCTCCTCGTTCTTGGTTTTCTTGCGGACG +
Preference number: 6 (lower is better)
Translates to: WCAGSMSFCQLRSSF*ARLASSSFLVFLRT
Trigger: CGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCCGGCACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
ENST00000598608.1
CDS CAA 90 bp CTGGAGGCACTGACACACGCGGCCAGGGCTAGTTCAAGTCCCTCTTaGCTGCGGGACCTTCTCAGGCCTCTCCCTGGTCTGAACACAGGG +
Preference number: 6 (lower is better)
Translates to: LEALTHAARASSSPS*LRDLLRPLPGLNTG
Trigger: CCCTGTGTTCAGACCAGGGAGAGGCCTGAGAAGGTCCCGCAGCAAAGAGGGACTTGAACTAGCCCTGGCCGCGTGTGTCAGTGCCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS TCA 72 bp GACGTTTCCCGCTCAGAGCCTGGCAGCTGGAGGCACTaGCACACGCGGCCAGGGCTAGTTCAAGTCCCTCTT +
Preference number: 6 (lower is better)
Translates to: DVSRSEPGSWRH*HTRPGLVQVPL
Trigger: AAGAGGGACTTGAACTAGCCCTGGCCGCGTGTGTCAGTGCCTCCAGCTGCCAGGCTCTGAGCGGGAAACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS GCA 72 bp TGCCTGCCCGCCCACCCGGCTTCTGCAAGATGGGAATaGACTTTGTGGCTGACAGGCCGGTCAGTCCAAGCA +
Preference number: 6 (lower is better)
Translates to: CLPAHPASARWE*TLWLTGRSVQA
Trigger: TGCTTGGACTGACCGGCCTGTCAGCCACAAAGTGCATTCCCATCTTGCAGAAGCCGGGTGGGCGGGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CCA 72 bp CTCATCCTCACCTGCCGTCTGACCTCCTCCAGTGTGTaGTGTGCGGGCTGCCCCAAGCCCTCCAGTGTACAT +
Preference number: 6 (lower is better)
Translates to: LILTCRLTSSSV*CAGCPKPSSVH
Trigger: ATGTACACTGGAGGGCTTGGGGCAGCCCGCACACCACACACTGGAGGAGGTCAGACGGCAGGTGAGGATGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CAA 72 bp GAGCTGGTGTGCGGTCGCACGGCGTTGACGGGGATCTaGCCACTGTGCTTGTCATTCTCGTCACGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ELVCGRTALTGI*PLCLSFSSRSR
Trigger: CCTGGAGCGTGACGAGAATGACAAGCACAGTGGCAAGATCCCCGTCAACGCCGTGCGACCGCACACCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000611692.4
CDS CAA 72 bp CTGACACACGCGGCCAGGGCTAGTTCAAGTCCCTCTTaGCTGCGGGACCTTCTCAGGCCTCTCCCTGGTCTG +
Preference number: 6 (lower is better)
Translates to: LTHAARASSSPS*LRDLLRPLPGL
Trigger: CAGACCAGGGAGAGGCCTGAGAAGGTCCCGCAGCAAAGAGGGACTTGAACTAGCCCTGGCCGCGTGTGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS CAA 72 bp AGGCGACAGCACAGAGGGTCCGCTTCAAGTGGAGGGTaGGGGATGGTGCCTCTCACTGGAGCCTCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: RRQHRGSASSGG*GMVPLTGASSK
Trigger: CTTGGAGGAGGCTCCAGTGAGAGGCACCATCCCCAACCCTCCACTTGAAGCGGACCCTCTGTGCTGTCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 72 bp TGCCGTCTGACCTCCTCCAGTGTGTGGTGTGCGGGCTaGCCCAAGCCCTCCAGTGTACATGGTACATACCCA +
Preference number: 6 (lower is better)
Translates to: CRLTSSSVWCAG*PKPSSVHGTYP
Trigger: TGGGTATGTACCATGTACACTGGAGGGCTTGGGGCAGCCCGCACACCACACACTGGAGGAGGTCAGACGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 72 bp ACAGAGGGTCCGCTTCAAGTGGAGGGTTGGGGATGGTaGCTCTCACTGGAGCCTCCTCCAAGCACACCTCTC +
Preference number: 6 (lower is better)
Translates to: TEGPLQVEGWGW*LSLEPPPSTPL
Trigger: GAGAGGTGTGCTTGGAGGAGGCTCCAGTGAGAGGCACCATCCCCAACCCTCCACTTGAAGCGGACCCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CCA 72 bp GCTTCTGCCAGCTCCGCAGCAGCTTCTTGGCCCGCTTaGCGAGCTCCTCGTTCTTGGTTTTCTTGCGGACGT +
Preference number: 6 (lower is better)
Translates to: ASASSAAASWPA*RAPRSWFSCGR
Trigger: ACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
ENST00000598608.1
CDS CCA 72 bp GTGGTGTGCGGGCTGCCCCAAGCCCTCCAGTGTACATaGTACATACCCACCCACCTGCTGAAACCCAGGATG +
Preference number: 6 (lower is better)
Translates to: VVCGLPQALQCT*YIPTHLLKPRM
Trigger: CATCCTGGGTTTCAGCAGGTGGGTGGGTATGTACCATGTACACTGGAGGGCTTGGGGCAGCCCGCACACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CCA 72 bp CGCGAGGCACGAGCTGTGAGGGCACACCGCCTCTCTTaGTCCTCCGAAGCAAAGACACTGATGCTCCCAGAA +
Preference number: 6 (lower is better)
Translates to: REARAVRAHRLS*SSEAKTLMLPE
Trigger: TTCTGGGAGCATCAGTGTCTTTGCTTCGGAGGACCAAGAGAGGCGGTGTGCCCTCACAGCTCGTGCCTCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CAA 72 bp AGCTTCTGCCAGCTCCGCAGCAGCTTCTTGGCCCGCTaGGCGAGCTCCTCGTTCTTGGTTTTCTTGCGGACG +
Preference number: 6 (lower is better)
Translates to: SFCQLRSSFLAR*ASSSFLVFLRT
Trigger: CGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
ENST00000598608.1
CDS CAA 72 bp GGCTCGATGAGCTTCTGCCAGCTCCGCAGCAGCTTCTaGGCCCGCTTGGCGAGCTCCTCGTTCTTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: GSMSFCQLRSSF*ARLASSSFLVF
Trigger: GAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
ENST00000598608.1
CDS CAA 72 bp TCGCGAGGCACGAGCTGTGAGGGCACACCGCCTCTCTaGGTCCTCCGAAGCAAAGACACTGATGCTCCCAGA +
Preference number: 6 (lower is better)
Translates to: SRGTSCEGTPPL*VLRSKDTDAPR
Trigger: TCTGGGAGCATCAGTGTCTTTGCTTCGGAGGACCAAGAGAGGCGGTGTGCCCTCACAGCTCGTGCCTCGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CAA 90 bp GGCTCGATGAGCTTCTGCCAGCTCCGCAGCAGCTTCTTGGCCCGCTaGGCGAGCTCCTCGTTCTTGGTTTTCTTGCGGACGTCGTTGATG +
Preference number: 6 (lower is better)
Translates to: GSMSFCQLRSSFLAR*ASSSFLVFLRTSLM
Trigger: CATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTGGCAGAAGCTCATCGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
ENST00000598608.1
CDS CAA 90 bp AGAGCAAGATCGCGAGGCACGAGCTGTGAGGGCACACCGCCTCTCTaGGTCCTCCGAAGCAAAGACACTGATGCTCCCAGAAGCTGCGGA +
Preference number: 6 (lower is better)
Translates to: RARSRGTSCEGTPPL*VLRSKDTDAPRSCG
Trigger: TCCGCAGCTTCTGGGAGCATCAGTGTCTTTGCTTCGGAGGACCAAGAGAGGCGGTGTGCCCTCACAGCTCGTGCCTCGCGATCTTGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS GCA 72 bp TGGGCATGTAGGATGGGAGTAACACCACTTGGTCTCTaGAGTGCCCGTGGGAGAGCAAGATCGCGAGGCACG +
Preference number: 6 (lower is better)
Translates to: WACRMGVTPLGL*SARGRARSRGT
Trigger: CGTGCCTCGCGATCTTGCTCTCCCACGGGCACTGCAGAGACCAAGTGGTGTTACTCCCATCCTACATGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CAA 72 bp CCCGCCCACCCGGCTTCTGCAAGATGGGAATGCACTTaGTGGCTGACAGGCCGGTCAGTCCAAGCAGACATA +
Preference number: 6 (lower is better)
Translates to: PAHPASARWECT*WLTGRSVQADI
Trigger: TATGTCTGCTTGGACTGACCGGCCTGTCAGCCACAAAGTGCATTCCCATCTTGCAGAAGCCGGGTGGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CAA 90 bp ACCTGCCTGCCCGCCCACCCGGCTTCTGCAAGATGGGAATGCACTTaGTGGCTGACAGGCCGGTCAGTCCAAGCAGACATAAGGCAGAAT +
Preference number: 6 (lower is better)
Translates to: TCLPAHPASARWECT*WLTGRSVQADIRQN
Trigger: ATTCTGCCTTATGTCTGCTTGGACTGACCGGCCTGTCAGCCACAAAGTGCATTCCCATCTTGCAGAAGCCGGGTGGGCGGGCAGGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CAA 90 bp CAGCTCCGCAGCAGCTTCTTGGCCCGCTTGGCGAGCTCCTCGTTCTaGGTTTTCTTGCGGACGTCGTTGATGAGCTTCCCAAGTCGTGTT +
Preference number: 6 (lower is better)
Translates to: QLRSSFLARLASSSF*VFLRTSLMSFPSRV
Trigger: AACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCTGCGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
ENST00000598608.1
ENST00000601478.1
CDS CCA 72 bp GCCCACCCGGCTTCTGCAAGATGGGAATGCACTTTGTaGCTGACAGGCCGGTCAGTCCAAGCAGACATAAGG +
Preference number: 6 (lower is better)
Translates to: AHPASARWECTL*LTGRSVQADIR
Trigger: CCTTATGTCTGCTTGGACTGACCGGCCTGTCAGCCACAAAGTGCATTCCCATCTTGCAGAAGCCGGGTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263390.8
ENST00000597244.1
CDS CCA 72 bp CCTCTCCTGATGTCCCCACGTGCCCACGAAGTGTGCTaGGCATGTAGGATGGGAGTAACACCACTTGGTCTC +
Preference number: 6 (lower is better)
Translates to: PLLMSPRAHEVC*ACRMGVTPLGL
Trigger: GAGACCAAGTGGTGTTACTCCCATCCTACATGCCCAGCACACTTCGTGGGCACGTGGGGACATCAGGAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CAA 90 bp TGCCATCCAGGGAGCTTCTTGGCCCGCTTGGCGAGCTCCTCGTTCTaGGTTTTCTTGCGGACGTCGTTGATGAGCTTCCCAAGTCGTGTT +
Preference number: 6 (lower is better)
Translates to: CHPGSFLARLASSSF*VFLRTSLMSFPSRV
Trigger: AACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTCCCTGGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS CAA 90 bp GCCCGCTTGGCGAGCTCCTCGTTCTTGGTTTTCTTGCGGACGTCGTaGATGAGCTTCCCAAGTCGTGTTTCCTACAACCAGAGGGAGATG +
Preference number: 6 (lower is better)
Translates to: ARLASSSFLVFLRTS*MSFPSRVSYNQREM
Trigger: CATCTCCCTCTGGTTGTAGGAAACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CAA 90 bp GGGAGCTTCTTGGCCCGCTTGGCGAGCTCCTCGTTCTTGGTTTTCTaGCGGACGTCGTTGATGAGCTTCCCAAGTCGTGTTTCCTCAAGT +
Preference number: 6 (lower is better)
Translates to: GSFLARLASSSFLVF*RTSLMSFPSRVSSS
Trigger: ACTTGAGGAAACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611692.4
CDS CAA 72 bp TTGGCCCGCTTGGCGAGCTCCTCGTTCTTGGTTTTCTaGCGGACGTCGTTGATGAGCTTCCCAAGTCGTGTT +
Preference number: 6 (lower is better)
Translates to: LARLASSSFLVF*RTSLMSFPSRV
Trigger: AACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263390.8
ENST00000597244.1
ENST00000598492.5
ENST00000598608.1
ENST00000601478.1
ENST00000611692.4
CDS CAA 90 bp GCCCGCTTGGCGAGCTCCTCGTTCTTGGTTTTCTTGCGGACGTCGTaGATGAGCTTCCCAAGTCGTGTTTCCTCAAGTGCCTCTTTGGTA +
Preference number: 6 (lower is better)
Translates to: ARLASSSFLVFLRTS*MSFPSRVSSSASLV
Trigger: TACCAAAGAGGCACTTGAGGAAACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263390.8
ENST00000598492.5
ENST00000598608.1
ENST00000601478.1
ENST00000611692.4
CDS CAA 90 bp AGCAGCTTCTTGGCCCGCTTGGCGAGCTCCTCGTTCTTGGTTTTCTaGCGGACGTCGTTGATGAGCTTCCCAAGTCGTGTTTCCTCAAGT +
Preference number: 6 (lower is better)
Translates to: SSFLARLASSSFLVF*RTSLMSFPSRVSSS
Trigger: ACTTGAGGAAACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263390.8
ENST00000598492.5
ENST00000598608.1
ENST00000601478.1
CDS CAA 90 bp AGCAGCTTCTTGGCCCGCTTGGCGAGCTCCTCGTTCTTGGTTTTCTaGCGGACGTCGTTGATGAGCTTCCCAAGTCGTGTTTCCTACAAC +
Preference number: 6 (lower is better)
Translates to: SSFLARLASSSFLVF*RTSLMSFPSRVSYN
Trigger: GTTGTAGGAAACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGCCAAGCGGGCCAAGAAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS TCA 72 bp AGTGCCTCGGTCACCTCTCCCTTGGTCTCTGTTGCCTaGAGAGCTGTGAAAAAGAAAGCAGCTCCCAAGGAC +
Preference number: 6 (lower is better)
Translates to: SASVTSPLVSVA*RAVKKKAAPKD
Trigger: GTCCTTGGGAGCTGCTTTCTTTTTCACAGCTCTTCAGGCAACAGAGACCAAGGGAGAGGTGACCGAGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS GCA 72 bp CAGGGCATTCACCTGCAGCTAGCAAGCCCTGCCCTGTaGGGTTATTTTACTTGCCATGAGGATGCAGTACAC +
Preference number: 6 (lower is better)
Translates to: QGIHLQLASPAL*GYFTCHEDAVH
Trigger: GTGTACTGCATCCTCATGGCAAGTAAAATAACCGCACAGGGCAGGGCTTGCTAGCTGCAGGTGAATGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS CAA 72 bp GCGAGCTCCTCGTTCTTGGTTTTCTTGCGGACGTCGTaGATGAGCTTCCCAAGTCGTGTTTCCTCAAGTGCC +
Preference number: 6 (lower is better)
Translates to: ASSSFLVFLRTS*MSFPSRVSSSA
Trigger: GGCACTTGAGGAAACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263390.8
ENST00000598492.5
ENST00000598608.1
ENST00000601478.1
ENST00000611692.4
CDS TCA 72 bp AGCAAGCCCTGCCCTGTGCGGTTATTTTACTTGCCATaGGGATGCAGTACACCGTCTACTATTCGTCGGACC +
Preference number: 6 (lower is better)
Translates to: SKPCPVRLFYLP*GCSTPSTIRRT
Trigger: GGTCCGACGAATAGTAGACGGTGTACTGCATCCTCATGGCAAGTAAAATAACCGCACAGGGCAGGGCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601478.1
CDS CAA 72 bp GCGAGCTCCTCGTTCTTGGTTTTCTTGCGGACGTCGTaGATGAGCTTCCCAAGTCGTGTTTCCTACAACCAG +
Preference number: 6 (lower is better)
Translates to: ASSSFLVFLRTS*MSFPSRVSYNQ
Trigger: CTGGTTGTAGGAAACACGACTTGGGAAGCTCATCAACGACGTCCGCAAGAAAACCAAGAACGAGGAGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS CCA 72 bp AGCCCTAAACTGCCAGCTTCCCTGACACAAAACTTCTaGGGATTTCCGGTCCTTTGTGACAATATAAATTCT +
Preference number: 6 (lower is better)
Translates to: SPKLPASLTQNF*GFPVLCDNINS
Trigger: AGAATTTATATTGTCACAAAGGACCGGAAATCCCCAGAAGTTTTGTGTCAGGGAAGCTGGCAGTTTAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597244.1
CDS TCA 72 bp CCTGACACAAAACTTCTGGGGATTTCCGGTCCTTTGTaGCAATATAAATTCTCAAACCTAGTTCCCAGACCT +
Preference number: 6 (lower is better)
Translates to: PDTKLLGISGPL*QYKFSNLVPRP
Trigger: AGGTCTGGGAACTAGGTTTGAGAATTTATATTGTCACAAAGGACCGGAAATCCCCAGAAGTTTTGTGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597244.1