RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED25 (Homo sapiens)

Ensembl gene IDs: ENSG00000104973

Ensembl transcript IDs: ENST00000312865.10, ENST00000538643.5, ENST00000593595.1, ENST00000593636.1, ENST00000593767.3, ENST00000594998.1, ENST00000595185.5, ENST00000599722.1

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTGTGAAATCTCTCAGGTCAAGTCACCATCAACTCACTCGTGACTaGAGTCCAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTG +
Preference number: 1 (lower is better)
Translates to: SVKSLRSSHHQLTRD*SPGAEVSRASRCVL
Trigger: CAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTGGACTTCAGTCACGAGTGAGTTGATGGTGACTTGACCTGAGAGATTTCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 90 bp AGCTTCTGTGAAATCTCTCAGGTCAAGTCACCATCAACTCACTCGTaGCTGAAGTCCAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGT +
Preference number: 1 (lower is better)
Translates to: SFCEISQVKSPSTHS*LKSRSGSVESIAVC
Trigger: ACACACCGCGATGCTCTCGACACTTCCGCTCCTGGACTTCAGTCACGAGTGAGTTGATGGTGACTTGACCTGAGAGATTTCACAGAAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR GCA 90 bp GTCACTCTGCTCCTTTATAAACTTGCCATCTGCTGTAGCTCTGAATaGCCAGGTCATTCTTCTCACGTGATTCCGGAACGGCGTACCACT +
Preference number: 1 (lower is better)
Translates to: VTLLLYKLAICCSSE*PGHSSHVIPERRTT
Trigger: AGTGGTACGCCGTTCCGGAATCACGTGAGAAGAATGACCTGGGCATTCAGAGCTACAGCAGATGGCAAGTTTATAAAGGAGCAGAGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR GCA 90 bp TTCTGTGCAGGACACGTCACTCTGCTCCTTTATAAACTTGCCATCTaGTGTAGCTCTGAATGCCCAGGTCATTCTTCTCACGTGATTCCG +
Preference number: 1 (lower is better)
Translates to: FCAGHVTLLLYKLAI*CSSECPGHSSHVIP
Trigger: CGGAATCACGTGAGAAGAATGACCTGGGCATTCAGAGCTACAGCAGATGGCAAGTTTATAAAGGAGCAGAGTGACGTGTCCTGCACAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 90 bp TTGAACAGTTCAGATTTCTTCCACAACCAAGTCACAGAGCTTCTGTaGAATCTCTCAGGTCAAGTCACCATCAACTCACTCGTGACTGAA +
Preference number: 1 (lower is better)
Translates to: LNSSDFFHNQVTELL*NLSGQVTINSLVTE
Trigger: TTCAGTCACGAGTGAGTTGATGGTGACTTGACCTGAGAGATTTCACAGAAGCTCTGTGACTTGGTTGTGGAAGAAATCTGAACTGTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR GCA 90 bp AAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTTaGGGAGAAATATTCAGTGTTCAGAACGGTCATAACCTTGACCAG +
Preference number: 1 (lower is better)
Translates to: KHTPSYIQVAVCGHP*GEIFSVQNGHNLDQ
Trigger: CTGGTCAAGGTTATGACCGTTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 90 bp TTAGAATTCAGCCTTGAATCCTTCAACTGGGAACGATGTTTAATTTaGTTCAGGTTCGTAACGGAAAACAGCTGTTCACAAGCGTGGGTA +
Preference number: 1 (lower is better)
Translates to: LEFSLESFNWERCLI*FRFVTENSCSQAWV
Trigger: TACCCACGCTTGTGAACAGCTGTTTTCCGTTACGAACCTGAATCAAATTAAACATCGTTCCCAGTTGAAGGATTCAAGGCTGAATTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CCA 90 bp TCGGTCACATCAAGATTCTTAACACCACAAATAAATAAAGCTAACTaGGTGGTAATAGTTTATGAGCAGCGAAAGAAAAGGCCACAATCA +
Preference number: 1 (lower is better)
Translates to: SVTSRFLTPQINKAN*VVIVYEQRKKRPQS
Trigger: TGATTGTGGCCTTTTCTTTCGCTGCTCATAAACTATTACCACCCAGTTAGCTTTATTTATTTGTGGTGTTAAGAATCTTGATGTGACCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR TCA 90 bp GAGATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTGTCACAGAGCTTCTGTaGAATCTCTCAGGTCAAGTC +
Preference number: 2 (lower is better)
Translates to: EMSVSGLGWHGGDGQFRIVTELL*NLSGQV
Trigger: GACTTGACCTGAGAGATTTCACAGAAGCTCTGTGAC...AATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CAA 90 bp TCCAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTaGCTCAGAACAAGTCAACTCCTGATGATGGATGCAACGACCCAA +
Preference number: 2 (lower is better)
Translates to: SRSGSVESIAVCSVQ*LRTSQLLMMDATTQ
Trigger: TTGGGTCGTTGCATCCATCATCAGGAGTTGACTTGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR TCA 90 bp GAGATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTAGGCCACAATCAATTTaGCTCTTTCAAGCAACTGGA +
Preference number: 2 (lower is better)
Translates to: EMSVSGLGWHGGDGQFRIRPQSI*LFQATG
Trigger: TCCAGTTGCTTGAAAGAGTCAAATTGATTGTGGCCT...AATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR GCA 90 bp ATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCACACAAGAAACATCTaGCAACAAAGGCAAACTGGA +
Preference number: 2 (lower is better)
Translates to: MSVSGLGWHGGDGQFRIQHTRNI*QQRQTG
Trigger: TCCAGTTTGCCTTTGTTGGCAGATGTTTCTTGTGTG...CTGAATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CCA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGCAGGGGAACCCACTGTaGCTTTTGCCTGATTTAAAA +
Preference number: 2 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWQGNPL*LLPDLK
Trigger: TTTTAAATCAGGCAAAAGCCACAGTGGGTTCCCCTG...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CAA 90 bp TGGACAATGTCTGTTCCTTCTCATGAGTCTGGATTCCGAGAGCCTTaGGGGGAATTTGGTCTTCAACCCCAGGACGTAGGTGAATACAGT +
Preference number: 2 (lower is better)
Translates to: WTMSVPSHESGFREP*GEFGLQPQDVGEYS
Trigger: ACTGTATTCACCTACGTCCTGGGGTTGAAGACCAAATTCCCCCAAAGGCTCTCGGAATCCAGACTCATGAGAAGGAACAGACATTGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR GCA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGTCCCAGTGTTGGGCCTaGCTTGGCACCATGCCACAG +
Preference number: 2 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWSQCWA*LGTMPQ
Trigger: CTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGA...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR GCA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCATGCTGTAGCTCTGAATaGCCAGGTCATTCTTCTCAC +
Preference number: 2 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSCCSSE*PGHSSH
Trigger: GTGAGAAGAATGACCTGGGCATTCAGAGCTACAGCA...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR GCA 90 bp AGTTGTGCTTCGGAACTCTGGCCAGTCTATGTGAAACTTTTCTCTCAATATACACAGGACACGTCACTCTaGTCCTTTATAAACTTGCCA +
Preference number: 2 (lower is better)
Translates to: SCASELWPVYVKLFSQYTQDTSL*SFINLP
Trigger: TGGCAAGTTTATAAAGGAGCAGAGTGACGTGTCCTG...TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR TCA 90 bp CAAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGTTGACCAGAAGTCTTTaGCTAACCTTCTCAGGGGAA +
Preference number: 2 (lower is better)
Translates to: QIGSLLNYGECMEHNTNMLTRSL*LTFSGE
Trigger: TTCCCCTGAGAAGGTTAGTCAAAGACTTCTGGTCAA...CATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR GCA 90 bp CAAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGTATAAACTTGCCATCTaGTGTAGCTCTGAATGCCCA +
Preference number: 2 (lower is better)
Translates to: QIGSLLNYGECMEHNTNMYKLAI*CSSECP
Trigger: TGGGCATTCAGAGCTACAGCAGATGGCAAGTTTATA...CATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR TCA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGCCAAGTTGGTTAACTTaGACAGTTCAGATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWPSWLT*TVQISS
Trigger: GGAAGAAATCTGAACTGTTCAAGTTAACCAACTTGG...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR GCA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGGTTTGTGGACATCCTTaGGGAGAAATATTCAGTGTT +
Preference number: 2 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWVCGHP*GEIFSV
Trigger: AACACTGAATATTTCTCCGCAAGGATGTCCACAAAC...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR TCA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGTCTGGCCAGTCTATGTaGAACTTTTCTCTCAATATA +
Preference number: 2 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWSGQSM*NFSLNI
Trigger: TATATTGAGAGAAAAGTTTCACATAGACTGGCCAGA...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CAA 90 bp GAGATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTAGTGTTGGGCCTGCCTaGGCACCATGCCACAGACTT +
Preference number: 3 (lower is better)
Translates to: EMSVSGLGWHGGDGQFRISVGPA*APCHRL
Trigger: AAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACT...AATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CAA 90 bp GAGATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTGGATTCCGAGAGCCTTaGGGGGAATTTGGTCTTCAA +
Preference number: 3 (lower is better)
Translates to: EMSVSGLGWHGGDGQFRIGFREP*GEFGLQ
Trigger: TTGAAGACCAAATTCCCCCAAAGGCTCTCGGAATCC...AATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACATCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 72 bp TCTCTCAGGTCAAGTCACCATCAACTCACTCGTGACTaGAGTCCAGGAGCGGAAGTGTCGAGAGCATCGCGG +
Preference number: 3 (lower is better)
Translates to: SLRSSHHQLTRD*SPGAEVSRASR
Trigger: CCGCGATGCTCTCGACACTTCCGCTCCTGGACTTCAGTCACGAGTGAGTTGATGGTGACTTGACCTGAGAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CAA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGCATCTTCACACAGACTaGTATTTAGGAACCAGCGCC +
Preference number: 3 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWHLHTD*YLGTSA
Trigger: GGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATG...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 72 bp GAAATCTCTCAGGTCAAGTCACCATCAACTCACTCGTaGCTGAAGTCCAGGAGCGGAAGTGTCGAGAGCATC +
Preference number: 3 (lower is better)
Translates to: EISQVKSPSTHS*LKSRSGSVESI
Trigger: GATGCTCTCGACACTTCCGCTCCTGGACTTCAGTCACGAGTGAGTTGATGGTGACTTGACCTGAGAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 72 bp GTAGGTGAATACAGTCCGGGCCACCTCTTTCATTTCTaGAAGCCGACTGCAGCACAGGAAAGAGTAAAGGTT +
Preference number: 3 (lower is better)
Translates to: VGEYSPGHLFHF*KPTAAQERVKV
Trigger: AACCTTTACTCTTTCCTGTGCTGCAGTCGGCTTTCAGAAATGAAAGAGGTGGCCCGGACTGTATTCACCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR GCA 72 bp CTCCTTTATAAACTTGCCATCTGCTGTAGCTCTGAATaGCCAGGTCATTCTTCTCACGTGATTCCGGAACGG +
Preference number: 3 (lower is better)
Translates to: LLYKLAICCSSE*PGHSSHVIPER
Trigger: CCGTTCCGGAATCACGTGAGAAGAATGACCTGGGCATTCAGAGCTACAGCAGATGGCAAGTTTATAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR GCA 72 bp GGACACGTCACTCTGCTCCTTTATAAACTTGCCATCTaGTGTAGCTCTGAATGCCCAGGTCATTCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: GHVTLLLYKLAI*CSSECPGHSSH
Trigger: GTGAGAAGAATGACCTGGGCATTCAGAGCTACAGCAGATGGCAAGTTTATAAAGGAGCAGAGTGACGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CCA 72 bp AATTCTTTTTGCGCCTTTGAGTTGAAGCCAAAAGGCTaGCGTCTTCCCTTCCACACCGAGATGTCAGTGTCA +
Preference number: 3 (lower is better)
Translates to: NSFCAFELKPKG*RLPFHTEMSVS
Trigger: TGACACTGACATCTCGGTGTGGAAGGGAAGACGCCAGCCTTTTGGCTTCAACTCAAAGGCGCAAAAAGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CAA 90 bp ATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCGCCAGCCTTTGGGGGAATTaGGTCTTCAACCCCAGGACG +
Preference number: 3 (lower is better)
Translates to: IVVESHHLHTDLYLGTSASLWGN*VFNPRT
Trigger: CGTCCTGGGGTTGAAGACCAAATTCCCCCAAAGGCT...GGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CAA 90 bp GGTGGATTCCCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTCTTGACCAGAAGTCTTaGACTAACCTTCTCAGGGGA +
Preference number: 3 (lower is better)
Translates to: GGFPRTKHTPSYIQVAVCLDQKS*TNLLRG
Trigger: TCCCCTGAGAAGGTTAGTCAAAGACTTCTGGTCAAG...ACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGGGAATCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 72 bp AACAAAGGCAAACTGGACAATGTCTGTTCCTTCTCATaGGTCTGGATTCCGAGAGCCTTTGGGGGAATTTGG +
Preference number: 3 (lower is better)
Translates to: NKGKLDNVCSFS*VWIPRAFGGIW
Trigger: CCAAATTCCCCCAAAGGCTCTCGGAATCCAGACTCATGAGAAGGAACAGACATTGTCCAGTTTGCCTTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR GCA 72 bp CAACAGTCATGTGTTTCTGTGCAGGACACGTCACTCTaGTCCTTTATAAACTTGCCATCTGCTGTAGCTCTG +
Preference number: 3 (lower is better)
Translates to: QQSCVSVQDTSL*SFINLPSAVAL
Trigger: CAGAGCTACAGCAGATGGCAAGTTTATAAAGGAGCAGAGTGACGTGTCCTGCACAGAAACACATGACTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 72 bp TGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTaGATCCTTCAACTGGGAACGATGTTTAATTTGATT +
Preference number: 3 (lower is better)
Translates to: WHGGDGQFRIQP*ILQLGTMFNLI
Trigger: AATCAAATTAAACATCGTTCCCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CCA 72 bp TTCAGGTTCGTAACGGAAAACAGCTGTTCACAAGCGTaGGTACTCCCAAACACAGATATTCAGGACAACTAC +
Preference number: 3 (lower is better)
Translates to: FRFVTENSCSQA*VLPNTDIQDNY
Trigger: GTAGTTGTCCTGAATATCTGTGTTTGGGAGTACCCACGCTTGTGAACAGCTGTTTTCCGTTACGAACCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR TCA 72 bp GTTTATGAGCAGCGAAAGAAAAGGCCACAATCAATTTaGCTCTTTCAAGCAACTGGACTTGTAAATCCCCCG +
Preference number: 3 (lower is better)
Translates to: VYEQRKKRPQSI*LFQATGLVNPP
Trigger: CGGGGGATTTACAAGTCCAGTTGCTTGAAAGAGTCAAATTGATTGTGGCCTTTTCTTTCGCTGCTCATAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CCA 72 bp TGTCATGACGCTGTCTGTAGTTGTGCTTCGGAACTCTaGCCAGTCTATGTGAAACTTTTCTCTCAATATACA +
Preference number: 3 (lower is better)
Translates to: CHDAVCSCASEL*PVYVKLFSQYT
Trigger: TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACTACAGACAGCGTCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CCA 72 bp CATTCACACAAGAAACATCTGCCAACAAAGGCAAACTaGACAATGTCTGTTCCTTCTCATGAGTCTGGATTC +
Preference number: 3 (lower is better)
Translates to: HSHKKHLPTKAN*TMSVPSHESGF
Trigger: GAATCCAGACTCATGAGAAGGAACAGACATTGTCCAGTTTGCCTTTGTTGGCAGATGTTTCTTGTGTGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CAA 90 bp AGTTGTGCTTCGGAACTCTGGCCAGTCTATGTGAAACTTTTCTCTCAATATACATGCTCCTTTATAAACTaGCCATCTGCTGTAGCTCTG +
Preference number: 3 (lower is better)
Translates to: SCASELWPVYVKLFSQYTCSFIN*PSAVAL
Trigger: CAGAGCTACAGCAGATGGCAAGTTTATAAAGGAGCA...TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CAA 90 bp CATTCAAGTAGCTGTTTGTGGACATCCTTGCGGAGAAATATTCAGTGTTCAGAAGTGTGTTCTGTTCAGTaGCTCAGAACAAGTCAACTC +
Preference number: 3 (lower is better)
Translates to: HSSSCLWTSLRRNIQCSEVCSVQ*LRTSQL
Trigger: GAGTTGACTTGTTCTGAGCAACTGAACAGAACACAC...TTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR GCA 72 bp CCATCATACATTCAAGTAGCTGTTTGTGGACATCCTTaGGGAGAAATATTCAGTGTTCAGAACGGTCATAAC +
Preference number: 3 (lower is better)
Translates to: PSYIQVAVCGHP*GEIFSVQNGHN
Trigger: GTTATGACCGTTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATGTATGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR-3UTR CAA 90 bp AGTTGTGCTTCGGAACTCTGGCCAGTCTATGTGAAACTTTTCTCTCAATATACAAAGGCCACAATCAATTaGACTCTTTCAAGCAACTGG +
Preference number: 3 (lower is better)
Translates to: SCASELWPVYVKLFSQYTKATIN*TLSSNW
Trigger: CCAGTTGCTTGAAAGAGTCAAATTGATTGTGGCCTT...TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CCA 72 bp CAAGCATACACCATCATACATTCAAGTAGCTGTTTGTaGACATCCTTGCGGAGAAATATTCAGTGTTCAGAA +
Preference number: 3 (lower is better)
Translates to: QAYTIIHSSSCL*TSLRRNIQCSE
Trigger: TTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CCA 72 bp ATCAAATCGGATCTTTACTCAACTATGGTGAATGCATaGAACATAATACAAACATGGATGTTACTGGAGTTT +
Preference number: 3 (lower is better)
Translates to: IKSDLYSTMVNA*NIIQTWMLLEF
Trigger: AAACTCCAGTAACATCCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTTGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTTCGGTCTGCCCCAGGCCCTGGTaGGGCGGAGGCAGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: VLSQCWACLGTMPQTSSVCPRPW*GGGSSA
Trigger: TGCGCTGCTGCCTCCGCCGCACCAGGGCCTGGGGCA...GACCGAAGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTTCGGTCCTCCTGGGGCCACAGTaGCTGCCATGGACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VLSQCWACLGTMPQTSSVLLGPQ*LPWTVP
Trigger: GGGCACCGTCCATGGCAGGCACTGTGGCCCCAGGAG...GACCGAAGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACTGGGGCCACAGTGCCTaGCATGGACGGTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: QERKCREHRGVFCSVAQNWGHSA*HGRCPG
Trigger: CCCGGGGCACCGTCCATGGCAGGCACTGTGGCCCCA...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp ATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCCAGTCTGCGGCGGTaGTGGGTTGAGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: MSVSGLGWHGGDGQFRIQPSLRR*WVEEEA
Trigger: AGCCTCCTCCTCAACCCACCACCGCCGCAGACTGGG...CTGAATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGGGGGACCATACCCCGTaGGGTACCCGCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWGDHTP*GTRHHH
Trigger: GTGGTGGTGGCGGGTACCGCACGGGGTATGGTCCCC...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTTCGGTCAGGAGGCAGACCCGGTaGGTCTGGCCAATCTGCTCG +
Preference number: 4 (lower is better)
Translates to: VLSQCWACLGTMPQTSSVRRQTR*VWPICS
Trigger: CGAGCAGATTGGCCAGACGCACCGGGTCTGCCTCCT...GACCGAAGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp ATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGACATCTGTCGGAGGCTaGAGCGGCTCCAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: MSVSGLGWHGGDGQFRIQTSVGG*SGSSKA
Trigger: GGCCTTGCTGGAGCCGCTGCAGCCTCCGACAGATGT...CTGAATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACTCACAGGGCGCCGTGTaGGGGAAGTGCACGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QERKCREHRGVFCSVAQNSQGAV*GKCTQP
Trigger: GGGCTGCGTGCACTTCCCCCACACGGCGCCCTGTGA...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp ATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGTGCGGTGGGCGGAGCTaGAGCAGATTCTGTGAGGGC +
Preference number: 4 (lower is better)
Translates to: MSVSGLGWHGGDGQFRIQCGGRS*SRFCEG
Trigger: GCCCTCACAGAATCTGCTCCAGCTCCGCCCACCGCA...CTGAATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGTCTGGGGCCGAAGGATaGGTCCAGGAGGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWSGAEG*VQEGVG
Trigger: GCCCACCCCCTCCTGGACCCATCCTTCGGCCCCAGA...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACTTCTGCGCGGCCACCTaGGCTGCACTCAGGTTCCCG +
Preference number: 4 (lower is better)
Translates to: QERKCREHRGVFCSVAQNFCAAT*AALRFP
Trigger: CGGGAACCTGAGTGCAGCTCAGGTGGCCGCGCAGAA...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGCCAGGACTGGGCAGGTaGTGGATGCAGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWPGLGR*WMQEWG
Trigger: CCCCCACTCCTGCATCCACCACCTGCCCAGTCCTGG...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACTGTGCGGGCCAGGACTaGGCAGGTGGTGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: QERKCREHRGVFCSVAQNCAGQD*AGGGCR
Trigger: CCTGCATCCACCACCTGCCCAGTCCTGGCCCGCACA...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp ATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGAGCTTCTGGGGCCACTaGTCCGTCTTCAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: MSVSGLGWHGGDGQFRIQSFWGH*SVFRFS
Trigger: CGAGAACCTGAAGACGGAGCAGTGGCCCCAGAAGCT...CTGAATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GAGATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTTCCGGGGAGACACAATaGAGAAGTGGATCCCCCGCT +
Preference number: 4 (lower is better)
Translates to: EMSVSGLGWHGGDGQFRISGETQ*RSGSPA
Trigger: AGCGGGGGATCCACTTCTCCATTGTGTCTCCCCGGA...AATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACACTGGCTGCTTTGACTaGAGGGGGCCTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: QERKCREHRGVFCSVAQNTGCFD*RGPGAE
Trigger: CTCAGCCCCAGGCCCCCTCCAGTCAAAGCAGCCAGT...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GAGATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTTGCTGGACCTGCTTGTaGTTGGTGATGACCTGCCGG +
Preference number: 4 (lower is better)
Translates to: EMSVSGLGWHGGDGQFRICWTCL*LVMTCR
Trigger: CCGGCAGGTCATCACCAACCACAAGCAGGTCCAGCA...AATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGTTGGCCCCAGGGTTCTaGGGCCGAAGGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWLAPGF*GRRMGP
Trigger: TGGACCCATCCTTCGGCCCCAGAACCCTGGGGCCAA...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTTCGGTCGTCCTTTCCCAGTGTTaGGCCTGCCTTGGCACCATG +
Preference number: 4 (lower is better)
Translates to: VLSQCWACLGTMPQTSSVVLSQC*ACLGTM
Trigger: CATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGAC...GACCGAAGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTACCCGCCACCACCACTaGAGCCGCAGCCGACGCCGC +
Preference number: 4 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPTRHHH*SRSRRR
Trigger: GCGGCGTCGGCTGCGGCTGCAGTGGTGGTGGCGGGT...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GGTGGATTCCCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGCCTGCCATGGACGGTaGCCCGGGCTGTGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: GGFPRTKHTPSYIQVAVCACHGR*PGLCRG
Trigger: CCCACGGCACAGCCCGGGGCACCGTCCATGGCAGGC...ACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGGGAATCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GGTGGATTCCCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTCTGCCCACCGAGGGCTaGGGCTCCCAGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGFPRTKHTPSYIQVAVCLPTEG*GSQLGW
Trigger: CCAGCCCAGCTGGGAGCCCCAGCCCTCGGTGGGCAG...ACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGGGAATCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GAGATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTGCGTCAGCTTGGTGTTaGCATCCACTGAGGCAGGTT +
Preference number: 4 (lower is better)
Translates to: EMSVSGLGWHGGDGQFRIASAWC*HPLRQV
Trigger: AACCTGCCTCAGTGGATGCCAACACCAAGCTGACGC...AATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGTTTTGCCGCTGGCAGTaGAGCCCGAGGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWFCRWQ*SPRGKL
Trigger: CAACTTCCCCCTCGGGCTCCACTGCCAGCGGCAAAA...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACACGTCACTCTGCCCCTACGGTACCCTaGGGCTGGGGCTGCGGTGGG +
Preference number: 4 (lower is better)
Translates to: DLNNGLNSHVFLCRTRHSAPTVP*GWGCGG
Trigger: CCCACCGCAGCCCCAGCCTCAGGGTACCGTAGGGGC...AGAGTGACGTGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTTCGGTCCCCCGCTCCCCAATCTaGTGCACAAGATTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: VLSQCWACLGTMPQTSSVPRSPI*CTRFSV
Trigger: AACTGAGAATCTTGTGCAGCAGATTGGGGAGCGGGG...GACCGAAGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAAGTGCCATCGAGCCAGGTaGCAAACTCATAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ERKCREHRGVFCSVAQNKCHRAR*QTHRRC
Trigger: GCAGCGCCTATGAGTTTGTCACCTGGCTCGATGGCA...CTTGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp AGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACATTATTGGAGACTGACTaGTGCCCACCGAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSGSVESIAVCSVQLLRTLLETD*CPPRAG
Trigger: CCCAGCCCTCGGTGGGCAGCAGTCAGTCTCCAATAA...TGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACACGTCACTCTGCCGTGTGGGGGAAGTaGACGCAGCCCGCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: DLNNGLNSHVFLCRTRHSAVWGK*TQPAKP
Trigger: CGGCTTCGCGGGCTGCGTGCACTTCCCCCACACGGC...AGAGTGACGTGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp AAATTAGTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTCCCATTCCTCGCTGCTaGTGCTCCAGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KLVLSQCWACLGTMPQTSPIPRC*CSSFCC
Trigger: GCAGCAGAAGCTGGAGCAGCAGCAGCGAGGAATGGG...AGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGACTAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp AAATTAGTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTCAGTGGAGACCAGACTaGGCTGGGAAGCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: KLVLSQCWACLGTMPQTSQWRPD*AGKQVV
Trigger: CACCACCTGCTTCCCAGCCCAGTCTGGTCTCCACTG...AGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGACTAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp AAATTAGTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTAAGCTTATTGGAGACTaGCTGCTGCCCACCGAGGGC +
Preference number: 4 (lower is better)
Translates to: KLVLSQCWACLGTMPQTSKLIGD*LLPTEG
Trigger: GCCCTCGGTGGGCAGCAGTCAGTCTCCAATAAGCTT...AGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGACTAATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGCAAACTCATAGGCGCTaGTGGTGGGAGCGTGACATT +
Preference number: 4 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWQTHRR*WWERDI
Trigger: AATGTCACGCTCCCACCAGCAGCGCCTATGAGTTTG...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTTCGGTCTGCTGTAGCTCTGAATaGCCAGGTCATTCTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VLSQCWACLGTMPQTSSVCCSSE*PGHSSH
Trigger: GTGAGAAGAATGACCTGGGCATTCAGAGCTACAGCA...GACCGAAGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTTCGGTCAGTCATGTGTTTCTGTaGAGGACACGTCACTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLSQCWACLGTMPQTSSVSHVFL*RTRHSA
Trigger: AGCAGAGTGACGTGTCCTGCACAGAAACACATGACT...GACCGAAGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACACGTCACTCTGCCGCTCACCCCTCCTaGGGCCACAGTGCCTGCCAT +
Preference number: 4 (lower is better)
Translates to: DLNNGLNSHVFLCRTRHSAAHPS*GHSACH
Trigger: ATGGCAGGCACTGTGGCCCCAGGAGGGGTGAGCGGC...AGAGTGACGTGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCGCCGTACGCGGCCACCTGAGCTaGACTCAGGTTCCCGGGAAC +
Preference number: 4 (lower is better)
Translates to: VVESHHLHTDLYLGTSAVRGHLS*TQVPGN
Trigger: GTTCCCGGGAACCTGAGTGCAGCTCAGGTGGCCGCG...TACGGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp AGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACATTCTGCTGCTGGACCTaGTTGTGGTTGGTGATGACC +
Preference number: 4 (lower is better)
Translates to: RSGSVESIAVCSVQLLRTFCCWT*LWLVMT
Trigger: GGTCATCACCAACCACAAGCAGGTCCAGCAGCAGAA...TGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACACGTCACTCTGGGTGGGCCAGAAGCTaGTCCAGGAGGGCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: DLNNGLNSHVFLCRTRHSGWARS*SRRALR
Trigger: CCTCAAGGCCCTCCTGGAGCAGCTTCTGGCCCACCC...AGAGTGACGTGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GAGATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGGACACGTCACTCTaGTCCTTTATAAACTTGCCA +
Preference number: 4 (lower is better)
Translates to: EMSVSGLGWHGGDGQFRIQDTSL*SFINLP
Trigger: TGGCAAGTTTATAAAGGAGCAGAGTGACGTGTCCTG...AATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp AGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAACTCATAGGCGCTGCTaGTGGGAGCGTGACATTGTA +
Preference number: 4 (lower is better)
Translates to: RSGSVESIAVCSVQLLRTTHRRC*WERDIV
Trigger: TACAATGTCACGCTCCCACCAGCAGCGCCTATGAGT...TGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCAGGCTCCCAGCTGGGCTaGGGAAGGGCCGCTCACCCC +
Preference number: 4 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSGSQLG*GRAAHP
Trigger: GGGGTGAGCGGCCCTTCCCCAGCCCAGCTGGGAGCC...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CATTCAAGTAGCTGTTTGTGGACATCCTTGCGGAGAAATATTCAGTGTTCAGAAGGCTGGGCAGTACCTTaGGGCTGGGGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: HSSSCLWTSLRRNIQCSEGWAVP*GWGCPV
Trigger: CACGGGGCAGCCCCAGCCCCAAGGTACTGCCCAGCC...TTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTCTTTCGTTTTGCCGCTaGCAGTGGAGCCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPLSFCR*QWSPRG
Trigger: CCCCCTCGGGCTCCACTGCCAGCGGCAAAACGAAAG...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACACGTCACTCTCTTGTTGGAGAGGGGTaGTGGGCGAGAAGCGAGGGC +
Preference number: 4 (lower is better)
Translates to: DLNNGLNSHVFLCRTRHSLVGEG*WARSEG
Trigger: GCCCTCGCTTCTCGCCCATCACCCCTCTCCAACAAG...AGAGTGACGTGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp ATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGTGTGTTCTGTTCAGTTaGTCAGAACAAGTCAACTCC +
Preference number: 4 (lower is better)
Translates to: MSVSGLGWHGGDGQFRIQCVLFS*SEQVNS
Trigger: GGAGTTGACTTGTTCTGAGCAACTGAACAGAACACA...CTGAATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCGCCGTACCGGGAGCAGCTTGTTaGAGAGGGGTGATGGGCGAG +
Preference number: 4 (lower is better)
Translates to: VVESHHLHTDLYLGTSAVPGAAC*RGVMGE
Trigger: CTCGCCCATCACCCCTCTCCAACAAGCTGCTCCCGG...TACGGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACGATTCCGAGAGCCTTTaGGGGAATTTGGTCTTCAAC +
Preference number: 4 (lower is better)
Translates to: QERKCREHRGVFCSVAQNDSESL*GNLVFN
Trigger: GTTGAAGACCAAATTCCCCCAAAGGCTCTCGGAATC...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCAGCGGCGGTGGTGGGTTaGGGAGGAGGCTTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSAAVVG*GGGFAA
Trigger: AGCTGCGAAGCCTCCTCCTCAACCCACCACCGCCGC...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCGCCGTATCCCAGTGTTGGGCCTaGCTTGGCACCATGCCACAG +
Preference number: 4 (lower is better)
Translates to: VVESHHLHTDLYLGTSAVSQCWA*LGTMPQ
Trigger: CTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGA...TACGGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp TGCCCGTTAGACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACAATGTGCCTCGGGTCCTaGCTCACATCTGTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CPLDLNNGLNSHVFLCRTMCLGS*LTSVGG
Trigger: GCCTCCGACAGATGTGAGCCAGGACCCGAGGCACAT...TGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTCTAACGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CAA 72 bp TCTGTTCCTTCTCATGAGTCTGGATTCCGAGAGCCTTaGGGGGAATTTGGTCTTCAACCCCAGGACGTAGGT +
Preference number: 4 (lower is better)
Translates to: SVPSHESGFREP*GEFGLQPQDVG
Trigger: ACCTACGTCCTGGGGTTGAAGACCAAATTCCCCCAAAGGCTCTCGGAATCCAGACTCATGAGAAGGAACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GGTGGATTCCCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTCGCAGTCCACTGTGTTaGACACCACGAGGCTGTACT +
Preference number: 4 (lower is better)
Translates to: GGFPRTKHTPSYIQVAVCRSPLC*TPRGCT
Trigger: AGTACAGCCTCGTGGTGTTCAACACAGTGGACTGCG...ACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGGGAATCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTGAACTGGACCATCCTTaGGTTCCGGAACAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPELDHP*VPEQRA
Trigger: GGCCCTTTGTTCCGGAACTCAAGGATGGTCCAGTTC...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTCCATCAACTCACTCGTaGCTGAAGTCCAGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPPSTHS*LKSRSG
Trigger: TCCGCTCCTGGACTTCAGTCACGAGTGAGTTGATGG...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAAGTTGACCAGAAGTCTTTaGCTAACCTTCTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ERKCREHRGVFCSVAQNKLTRSL*LTFSGE
Trigger: TTCCCCTGAGAAGGTTAGTCAAAGACTTCTGGTCAA...CTTGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCCTTGGCAGCCTCCACTaGATTCTGCGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: EIVVESHHLHTDLYLGTSLGSLH*ILRGHL
Trigger: CAGGTGGCCGCGCAGAATGCAGTGGAGGCTGCCAAG...GCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CAA 72 bp GGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTaGCTCAGAACAAGTCAACTCCTGATGATGGATGCA +
Preference number: 4 (lower is better)
Translates to: GSVESIAVCSVQ*LRTSQLLMMDA
Trigger: TGCATCCATCATCAGGAGTTGACTTGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTCAACAAGTATGGGGGTaGGTTGCAGATGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPQQVWG*VADEEA
Trigger: TGCCTCCTCATCTGCAACTCACCCCCATACTTGTTG...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp CTCTTTCATAATTCTTTTTGCGCCTTTGAGTTGAAGCCAAAAGGCTGGCGTCTTGGTTTGGGTTTCTCTTaGCACTCCAGGACCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LFHNSFCAFELKPKGWRLGLGFS*HSRTPL
Trigger: GAGCGGGGTCCTGGAGTGGCAAGAGAAACCCAAACC...AAGACGCCAGCCTTTTGGCTTCAACTCAAAGGCGCAAAAAGAATTATGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CATTCAAGTAGCTGTTTGTGGACATCCTTGCGGAGAAATATTCAGTGTTCAGAAGAGACCAGACTGGGCTaGGAAGCAGGTGGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: HSSSCLWTSLRRNIQCSEETRLG*EAGGGL
Trigger: CAAGCCACCACCTGCTTCCCAGCCCAGTCTGGTCTC...TTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CAAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGCCACAGTGCCTGCCATaGACGGTGCCCCGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QIGSLLNYGECMEHNTNMPQCLP*TVPRAV
Trigger: CACAGCCCGGGGCACCGTCCATGGCAGGCACTGTGG...CATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTGCCTTTGGGGGAATTTaGTCTTCAACCCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPAFGGI*SSTPGR
Trigger: ACGTCCTGGGGTTGAAGACCAAATTCCCCCAAAGGC...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CAA 72 bp TCTGTGCAGGACACGTCACTCTGCTCCTTTATAAACTaGCCATCTGCTGTAGCTCTGAATGCCCAGGTCATT +
Preference number: 4 (lower is better)
Translates to: SVQDTSLCSFIN*PSAVALNAQVI
Trigger: AATGACCTGGGCATTCAGAGCTACAGCAGATGGCAAGTTTATAAAGGAGCAGAGTGACGTGTCCTGCACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGCAAAACAAACCCTATTaGCATTTGAGTCCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWQNKPY*HLSPFF
Trigger: GAAAAAGGGACTCAAATGTCAATAGGGTTTGTTTTG...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp AAATTAGTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTTTTAGAATTCAGCCTTaGATCCTTCAACTGGGAACG +
Preference number: 4 (lower is better)
Translates to: KLVLSQCWACLGTMPQTSFRIQP*ILQLGT
Trigger: CGTTCCCAGTTGAAGGATTCAAGGCTGAATTCTAAA...AGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGACTAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCACGAACCAGCACCATGTaGCTCGGGTCCTGGCTCACA +
Preference number: 4 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSRTSTM*LGSWLT
Trigger: TGTGAGCCAGGACCCGAGGCACATGGTGCTGGTTCG...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCTGCTGCTCCAGCTTCTaGTGCTGGACCTGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: EIVVESHHLHTDLYLGTSCCSSF*CWTCLW
Trigger: CCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCAGCA...GCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp AGTTGTGCTTCGGAACTCTGGCCAGTCTATGTGAAACTTTTCTCTCAATATACAATTCCTCGCTGCTGCTaGTCCAGCTTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SCASELWPVYVKLFSQYTIPRCC*SSFCCW
Trigger: CCAGCAGCAGAAGCTGGAGCAGCAGCAGCGAGGAAT...TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp AGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAGTTTGTGGACATCCTTaGGGAGAAATATTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: RSGSVESIAVCSVQLLRTVCGHP*GEIFSV
Trigger: AACACTGAATATTTCTCCGCAAGGATGTCCACAAAC...TGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GGAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGGTGACCGCGTCAGCTTaGTGTTGGCATCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GDSCRISPSSHRLVFRNQVTASA*CWHPLR
Trigger: CCTCAGTGGATGCCAACACCAAGCTGACGCGGTCAC...CTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GGAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGGGTGTTGGCATCCACTaGGGCAGGTTTGGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GDSCRISPSSHRLVFRNQGVGIH*GRFGFL
Trigger: GAGAAACCCAAACCTGCCTCAGTGGATGCCAACACC...CTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GGTGGATTCCCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTAAGTCATCAAACAGCTaGAAGGCTGTGCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GGFPRTKHTPSYIQVAVCKSSNS*KAVLSP
Trigger: AGGACTCAGCACAGCCTTGCAGCTGTTTGATGACTT...ACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGGGAATCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp AGTTGTGCTTCGGAACTCTGGCCAGTCTATGTGAAACTTTTCTCTCAATATACATGCTCCAGCTTCTGCTaGTGGACCTGCTTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SCASELWPVYVKLFSQYTCSSFC*WTCLWL
Trigger: CAACCACAAGCAGGTCCAGCAGCAGAAGCTGGAGCA...TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCCATAGGCGCTGCTGGTaGGAGCGTGACATTGTACGT +
Preference number: 4 (lower is better)
Translates to: EIVVESHHLHTDLYLGTSHRRCW*ERDIVR
Trigger: ACGTACAATGTCACGCTCCCACCAGCAGCGCCTATG...GCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp AGTTGTGCTTCGGAACTCTGGCCAGTCTATGTGAAACTTTTCTCTCAATATACAGACACAATGGAGAAGTaGATCCCCCGCTCCCCAATC +
Preference number: 4 (lower is better)
Translates to: SCASELWPVYVKLFSQYTDTMEK*IPRSPI
Trigger: GATTGGGGAGCGGGGGATCCACTTCTCCATTGTGTC...TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp ATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCGCCCCACTGAGGCAGGTTTaGGTTTCTCTTGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: IVVESHHLHTDLYLGTSAPLRQV*VSLATP
Trigger: TGGAGTGGCAAGAGAAACCCAAACCTGCCTCAGTGG...GGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CAA 72 bp AGTGTTCAGAACGGTCATAACCTTGACCAGAAGTCTTaGACTAACCTTCTCAGGGGAACCCACTGTGGCTTT +
Preference number: 4 (lower is better)
Translates to: SVQNGHNLDQKS*TNLLRGTHCGF
Trigger: AAAGCCACAGTGGGTTCCCCTGAGAAGGTTAGTCAAAGACTTCTGGTCAAGGTTATGACCGTTCTGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCATGCGGTAGAGGCCTTTaGGAGACTCCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSCGRGL*ETPGPC
Trigger: ACAAGGACCTGGAGTCTCTCAAAGGCCTCTACCGCA...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp CATTCAAGTAGCTGTTTGTGGACATCCTTGCGGAGAAATATTCAGTGTTCAGAATGCGTCTGGCCAATCTaGTCGCGCATCTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HSSSCLWTSLRRNIQCSECVWPI*SRIFLK
Trigger: CTTCAAGAAGATGCGCGAGCAGATTGGCCAGACGCA...TTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAAGTTTCATAATTCTTTTTaGGCCTTTGAGTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ERKCREHRGVFCSVAQNKFHNSF*AFELKP
Trigger: TGGCTTCAACTCAAAGGCGCAAAAAGAATTATGAAA...CTTGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CATTCAAGTAGCTGTTTGTGGACATCCTTGCGGAGAAATATTCAGTGTTCAGAAAGTAGGGTCCCAGGTTaGCCGTACCCTCAATCACAA +
Preference number: 4 (lower is better)
Translates to: HSSSCLWTSLRRNIQCSESRVPG*PYPQSQ
Trigger: TTGTGATTGAGGGTACGGCCAACCTGGGACCCTACT...TTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCTGCATCCAGAGTACGTaGTGCTCTCAACAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EIVVESHHLHTDLYLGTSCIQST*CSQQQA
Trigger: TGCCTGCTGTTGAGAGCACCACGTACTCTGGATGCA...GCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp GACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACACGTCACTCTTTGGTGAAATGGAACTaGACCATCCTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: DLNNGLNSHVFLCRTRHSLVKWN*TILEFR
Trigger: CCGGAACTCAAGGATGGTCCAGTTCCATTTCACCAA...AGAGTGACGTGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTCAGGGGAACCCACTGTaGCTTTTGCCTGATTTAAAA +
Preference number: 4 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPQGNPL*LLPDLK
Trigger: TTTTAAATCAGGCAAAAGCCACAGTGGGTTCCCCTG...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp AGTTGTGCTTCGGAACTCTGGCCAGTCTATGTGAAACTTTTCTCTCAATATACAATCCAGAGTACGTGGTaGTCTCAACAGCAGGCAACA +
Preference number: 4 (lower is better)
Translates to: SCASELWPVYVKLFSQYTIQSTW*SQQQAT
Trigger: TGTTGCCTGCTGTTGAGAGCACCACGTACTCTGGAT...TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp CTCTTTCATAATTCTTTTTGCGCCTTTGAGTTGAAGCCAAAAGGCTGGCGTCTTCAAGATTCTCAGTTGTaGATCCAGAGTACGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LFHNSFCAFELKPKGWRLQDSQL*IQSTWC
Trigger: GCACCACGTACTCTGGATGCACAACTGAGAATCTTG...AAGACGCCAGCCTTTTGGCTTCAACTCAAAGGCGCAAAAAGAATTATGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCCGCTCCCCAATCTGCTaGACAAGATTCTCAGTTGTG +
Preference number: 4 (lower is better)
Translates to: EIVVESHHLHTDLYLGTSRSPIC*TRFSVV
Trigger: CACAACTGAGAATCTTGTGCAGCAGATTGGGGAGCG...GCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCAAGGCCAGAAGCTTATTaGAGACTGACTGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSRPEAY*RLTAAH
Trigger: GTGGGCAGCAGTCAGTCTCCAATAAGCTTCTGGCCT...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GGAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGGTCACAGAGCTTCTGTaGAATCTCTCAGGTCAAGTC +
Preference number: 4 (lower is better)
Translates to: GDSCRISPSSHRLVFRNQVTELL*NLSGQV
Trigger: GACTTGACCTGAGAGATTTCACAGAAGCTCTGTGAC...CTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GGTGGATTCCCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTCCAAGTTGGTTAACTTaGACAGTTCAGATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GGFPRTKHTPSYIQVAVCPSWLT*TVQISS
Trigger: GGAAGAAATCTGAACTGTTCAAGTTAACCAACTTGG...ACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGGGAATCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp GACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACACGTCACTCTTTTCTGAAAGCCGACTaGAGCACAGGAAAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: DLNNGLNSHVFLCRTRHSFLKAD*STGKSK
Trigger: TTTACTCTTTCCTGTGCTGCAGTCGGCTTTCAGAAA...AGAGTGACGTGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGTCCAGCTTCTGCTGCTaGACCTGCTTGTGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWSSFCC*TCLWLV
Trigger: CACCAACCACAAGCAGGTCCAGCAGCAGAAGCTGGA...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp CAAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGATTCTGTGAGGGCCTaGCTTGGTCCTCCAGAATGG +
Preference number: 4 (lower is better)
Translates to: QIGSLLNYGECMEHNTNMDSVRA*LGPPEW
Trigger: CCATTCTGGAGGACCAAGCCAGGCCCTCACAGAATC...CATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CCA 90 bp TGCCCGTTAGACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACACCAACAAAGGCAAACTaGACAATGTCTGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CPLDLNNGLNSHVFLCRTPTKAN*TMSVPS
Trigger: AGAAGGAACAGACATTGTCCAGTTTGCCTTTGTTGG...TGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTCTAACGGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
3UTR CAA 72 bp GAGATAGTTGTAGAATCTCACCATCTTCACACAGACTaGTATTTAGGAACCAGCGCCGTATTGCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: EIVVESHHLHTD*YLGTSAVLHCS
Trigger: ACTACAGTGCAATACGGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp CTCTTTCATAATTCTTTTTGCGCCTTTGAGTTGAAGCCAAAAGGCTGGCGTCTTCACACAAGAAACATCTaGCAACAAAGGCAAACTGGA +
Preference number: 4 (lower is better)
Translates to: LFHNSFCAFELKPKGWRLHTRNI*QQRQTG
Trigger: TCCAGTTTGCCTTTGTTGGCAGATGTTTCTTGTGTG...AAGACGCCAGCCTTTTGGCTTCAACTCAAAGGCGCAAAAAGAATTATGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGGCTCGCGCATCTTCTTaGAGTCATCAAACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWARASS*SHQTAA
Trigger: TGCAGCTGTTTGATGACTTCAAGAAGATGCGCGAGC...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp GTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCGCCGTATCTGGCCAGTCTATGTaGAACTTTTCTCTCAATATA +
Preference number: 4 (lower is better)
Translates to: VVESHHLHTDLYLGTSAVSGQSM*NFSLNI
Trigger: TATATTGAGAGAAAAGTTTCACATAGACTGGCCAGA...TACGGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR TCA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGGCTCTTACTATGCTTTaGTTCATAGTGGCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWALTML*FIVAFQ
Trigger: CTGAAACGCCACTATGAATCAAAGCATAGTAAGAGC...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR GCA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGTATAAACTTGCCATCTaGTGTAGCTCTGAATGCCCA +
Preference number: 4 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWYKLAI*CSSECP
Trigger: TGGGCATTCAGAGCTACAGCAGATGGCAAGTTTATA...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS CCA 90 bp GCAGGCAGCACGAGTCCCCGAACCAGCACCATGTGCCTCGGGTCCTaGCTCACATCTGTCGGAGGCTGCAGCGGCTCCAGCAAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: AGSTSPRTSTMCLGS*LTSVGGCSGSSKAG
Trigger: CCCGGCCTTGCTGGAGCCGCTGCAGCCTCCGACAGATGTGAGCCAGGACCCGAGGCACATGGTGCTGGTTCGGGGACTCGTGCTGCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595185.5
CDS GCA 90 bp GAGCCACCCCCAACAGGCAGCACGAGTCCCCGAACCAGCACCATGTaGCTCGGGTCCTGGCTCACATCTGTCGGAGGCTGCAGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: EPPPTGSTSPRTSTM*LGSWLTSVGGCSGS
Trigger: GGAGCCGCTGCAGCCTCCGACAGATGTGAGCCAGGACCCGAGGCACATGGTGCTGGTTCGGGGACTCGTGCTGCCTGTTGGGGGTGGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312865.10
ENST00000593767.3
CDS CCA 90 bp ACAGGCAGCACGAGTCCCCGAACCAGCACCATGTGCCTCGGGTCCTaGCTCACATCTGTCGGAGGCTGCAGCGGCTCCAGCAAGGCCGGG +
Preference number: 5 (lower is better)
Translates to: TGSTSPRTSTMCLGS*LTSVGGCSGSSKAG
Trigger: CCCGGCCTTGCTGGAGCCGCTGCAGCCTCCGACAGATGTGAGCCAGGACCCGAGGCACATGGTGCTGGTTCGGGGACTCGTGCTGCCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312865.10
ENST00000593767.3
CDS TCA 90 bp GCCTTCTGGTTCTTGGCAGCCTCCACTGCATTCTGCGCGGCCACCTaGGCTGCACTCAGGTTCCCGGGAACGTCTCCCCCGAAGTCCGTC +
Preference number: 5 (lower is better)
Translates to: AFWFLAASTAFCAAT*AALRFPGTSPPKSV
Trigger: GACGGACTTCGGGGGAGACGTTCCCGGGAACCTGAGTGCAGCTCAGGTGGCCGCGCAGAATGCAGTGGAGGCTGCCAAGAACCAGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538643.5
CDS GCA 90 bp CTGGTTCTTGGCAGCCTCCACTGCATTCTGCGCGGCCACCTGAGCTaGACTCAGGTTCCCGGGAACGTCTCCCCCGAAGTCCGTCTCAGC +
Preference number: 5 (lower is better)
Translates to: LVLGSLHCILRGHLS*TQVPGNVSPEVRLS
Trigger: GCTGAGACGGACTTCGGGGGAGACGTTCCCGGGAACCTGAGTGCAGCTCAGGTGGCCGCGCAGAATGCAGTGGAGGCTGCCAAGAACCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538643.5
CDS CCA 90 bp CTGCTCCTACAACGCCTGCCCTCTCAGAACCCAGCTGCCACAGTGTaGCCACGTGGACAGGCCATGTGCAGACACTGGGATGGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LLLQRLPSQNPAATV*PRGQAMCRHWDGRS
Trigger: GGACCGGCCATCCCAGTGTCTGCACATGGCCTGTCCACGTGGCCACACTGTGGCAGCTGGGTTCTGAGAGGGCAGGCGTTGTAGGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 90 bp GGAGCAGGTAGTGCTTGCGGAGCCCCTCGAAGTAGGGTCCCAGGTTaGCCGTACCCTCAATCACAAACACCACGTCGGCCACCACGCTCC +
Preference number: 5 (lower is better)
Translates to: GAGSACGAPRSRVPG*PYPQSQTPRRPPRS
Trigger: GGAGCGTGGTGGCCGACGTGGTGTTTGTGATTGAGGGTACGGCCAACCTGGGACCCTACTTCGAGGGGCTCCGCAAGCACTACCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312865.10
ENST00000538643.5
ENST00000593595.1
ENST00000593636.1
ENST00000593767.3
ENST00000595185.5
CDS CCA 90 bp AAACACACGGCCCTCTCCTTCTCTCTTTCGTTTTGCCGCTGGCAGTaGAGCCCGAGGGGGAAGTTGTGCGGGCCAGGACTGGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: KHTALSFSLSFCRWQ*SPRGKLCGPGLGRW
Trigger: CCACCTGCCCAGTCCTGGCCCGCACAACTTCCCCCTCGGGCTCCACTGCCAGCGGCAAAACGAAAGAGAGAAGGAGAGGGCCGTGTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS CCA 90 bp CGGCCTAGATGCACAGCGTGGTACCCACAGGCCTGTGATCAACGGTaGGTCGGACCCCGGGTATCCAAGAGATCCTCCAGCCCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: RPRCTAWYPQACDQR*VGPRVSKRSSSPQH
Trigger: GTGCTGAGGGCTGGAGGATCTCTTGGATACCCGGGGTCCGACCCACCGTTGATCACAGGCCTGTGGGTACCACGCTGTGCATCTAGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 90 bp TTCTCGAAACACACGGCCCTCTCCTTCTCTCTTTCGTTTTGCCGCTaGCAGTGGAGCCCGAGGGGGAAGTTGTGCGGGCCAGGACTGGGC +
Preference number: 5 (lower is better)
Translates to: FSKHTALSFSLSFCR*QWSPRGKLCGPGLG
Trigger: GCCCAGTCCTGGCCCGCACAACTTCCCCCTCGGGCTCCACTGCCAGCGGCAAAACGAAAGAGAGAAGGAGAGGGCCGTGTGTTTCGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS CCA 90 bp GGATACCTGCTCCCAGCAGCCTCCCATCAACTAGGGGCTGCCCAGTaGCCTAGGTCCGGGATAGGAGGTGAAAGGAATGCCTGCTCTGGA +
Preference number: 5 (lower is better)
Translates to: GYLLPAASHQLGAAQ*PRSGIGGERNACSG
Trigger: TCCAGAGCAGGCATTCCTTTCACCTCCTATCCCGGACCTAGGCCACTGGGCAGCCCCTAGTTGATGGGAGGCTGCTGGGAGCAGGTATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS TCA 90 bp TGGTGCTCTCAACAGCAGGCAACAAGTATGGGGGTGAGTTGCAGATaGGGAGGCAGACCCGGTGCGTCTGGCCAATCTGCTCGCGCATCT +
Preference number: 5 (lower is better)
Translates to: WCSQQQATSMGVSCR*GGRPGASGQSARAS
Trigger: AGATGCGCGAGCAGATTGGCCAGACGCACCGGGTCTGCCTCCTCATCTGCAACTCACCCCCATACTTGTTGCCTGCTGTTGAGAGCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS TCA 90 bp CAGAAACTGAGGCGCTCAGGGCAAGCTAGGGTTCCAGCTGCCCACTaGGAGGGAAAGCGGAGAGAAAGTGCTGGAGCCCAGCTCTTCAAC +
Preference number: 5 (lower is better)
Translates to: QKLRRSGQARVPAAH*EGKRRESAGAQLFN
Trigger: GTTGAAGAGCTGGGCTCCAGCACTTTCTCTCCGCTTTCCCTCTCAGTGGGCAGCTGGAACCCTAGCTTGCCCTGAGCGCCTCAGTTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 90 bp CAGGGTCGCTGTGACTATGCGATGTCTGATCCACAGCAAGAGCCCTaGCTGAGGCTCAGCCCACAGGAAGCACCCAGGAAACATCACTGG +
Preference number: 5 (lower is better)
Translates to: QGRCDYAMSDPQQEP*LRLSPQEAPRKHHW
Trigger: CCAGTGATGTTTCCTGGGTGCTTCCTGTGGGCTGAGCCTCAGGCAGGGCTCTTGCTGTGGATCAGACATCGCATAGTCACAGCGACCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS-3UTR CAA 90 bp ATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGAGTGACCGCGTCAGCTaGGTGTTGGCATCCACTGAG +
Preference number: 5 (lower is better)
Translates to: MSVSGLGWHGGDGQFRIQSDRVS*VLASTE
Trigger: CTCAGTGGATGCCAACACCAAGCTGACGCGGTCACT...CTGAATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS TCA 90 bp TCCAGAGTACGTGGTGCTCTCAACAGCAGGCAACAAGTATGGGGGTaGGTTGCAGATGAGGAGGCAGACCCGGTGCGTCTGGCCAATCTG +
Preference number: 5 (lower is better)
Translates to: SRVRGALNSRQQVWG*VADEEADPVRLANL
Trigger: CAGATTGGCCAGACGCACCGGGTCTGCCTCCTCATCTGCAACTCACCCCCATACTTGTTGCCTGCTGTTGAGAGCACCACGTACTCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS GCA 90 bp GACCCAAGCCACAGAGGGATCTATCCTGGCTCTGACCCATCCCCCTaGACTGAGGCTACAATGTACCCATCTGGAAAAGGAGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: DPSHRGIYPGSDPSP*TEATMYPSGKGGQG
Trigger: CCCCTGTCCTCCTTTTCCAGATGGGTACATTGTAGCCTCAGTGCAGGGGGATGGGTCAGAGCCAGGATAGATCCCTCTGTGGCTTGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593636.1
CDS-3UTR CAA 90 bp GAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAAGCACTCCGGGAGCAGCTaGTTGGAGAGGGGTGATGGG +
Preference number: 5 (lower is better)
Translates to: ERKCREHRGVFCSVAQNKHSGSS*LERGDG
Trigger: CCCATCACCCCTCTCCAACAAGCTGCTCCCGGAGTG...CTTGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS TCA 90 bp GTTAAGGAGAACAGGTGTGCTATGGGTTGCTCTGGAGACAGAAACTaGGGCGCTCAGGGCAAGCTAGGGTTCCAGCTGCCCACTGAGAGG +
Preference number: 5 (lower is better)
Translates to: VKENRCAMGCSGDRN*GAQGKLGFQLPTER
Trigger: CCTCTCAGTGGGCAGCTGGAACCCTAGCTTGCCCTGAGCGCCTCAGTTTCTGTCTCCAGAGCAACCCATAGCACACCTGTTCTCCTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 90 bp GGAGCCCTCAGAGCTCCGCAAAGGCCATGGGGGAACCCTCATTCTTaGATCCTATGTCTTTACTTCCCAGGAGCACTCGGTCTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GALRAPQRPWGNPHS*ILCLYFPGALGLGA
Trigger: AGCACCAAGACCGAGTGCTCCTGGGAAGTAAAGACATAGGATCCAAGAATGAGGGTTCCCCCATGGCCTTTGCGGAGCTCTGAGGGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 90 bp ACACACAGGAGGATCATGGGAAACGCTCTTAACCCACTAGGTCCTTaGACCCATGGGCTGTACTTTCCCGGAGCCCTCAGAGCTCCGCAA +
Preference number: 5 (lower is better)
Translates to: THRRIMGNALNPLGP*THGLYFPGALRAPQ
Trigger: TTGCGGAGCTCTGAGGGCTCCGGGAAAGTACAGCCCATGGGTCCAAGGACCTAGTGGGTTAAGAGCGTTTCCCATGATCCTCCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS-3UTR CAA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACTGCTGCTGGACCTGCTaGTGGTTGGTGATGACCTGC +
Preference number: 5 (lower is better)
Translates to: QERKCREHRGVFCSVAQNCCWTC*WLVMTC
Trigger: GCAGGTCATCACCAACCACAAGCAGGTCCAGCAGCA...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS GCA 90 bp GTCTGGCCAATCTGCTCGCGCATCTTCTTGAAGTCATCAAACAGCTaGAAGGCTGTGCTGAGTCCTTCCGCGATGAGGCTGCAGCTCTCA +
Preference number: 5 (lower is better)
Translates to: VWPICSRIFLKSSNS*KAVLSPSAMRLQLS
Trigger: TGAGAGCTGCAGCCTCATCGCGGAAGGACTCAGCACAGCCTTGCAGCTGTTTGATGACTTCAAGAAGATGCGCGAGCAGATTGGCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS GCA 90 bp ATGTCCTGTCCTGTGCAAAATATAAATGCCTGCTCCTACAACGCCTaGCCTCTCAGAACCCAGCTGCCACAGTGTGGCCACGTGGACAGG +
Preference number: 5 (lower is better)
Translates to: MSCPVQNINACSYNA*PLRTQLPQCGHVDR
Trigger: CCTGTCCACGTGGCCACACTGTGGCAGCTGGGTTCTGAGAGGGCAGGCGTTGTAGGAGCAGGCATTTATATTTTGCACAGGACAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 90 bp TTCTTGGATCCTATGTCTTTACTTCCCAGGAGCACTCGGTCTTGGTaGTCTAGCCCAGGAGCTGCTGGGACACTCAGTCCAGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: FLDPMSLLPRSTRSW*SSPGAAGTLSPDLC
Trigger: GCAGAGGTCTGGACTGAGTGTCCCAGCAGCTCCTGGGCTAGAGCACCAAGACCGAGTGCTCCTGGGAAGTAAAGACATAGGATCCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS-3UTR CAA 90 bp ATGTCAGTGTCAGGCCTCGGGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGTGCTCGCGCATCTTCTaGAAGTCATCAAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: MSVSGLGWHGGDGQFRIQCSRIF*KSSNSC
Trigger: GCAGCTGTTTGATGACTTCAAGAAGATGCGCGAGCA...CTGAATTCTAAACTGCCCGTCCCCACCGTGCCACCCGAGGCCTGACACTGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAAGTATGGGGGTGAGTaGCAGATGAGGAGGCAGACC +
Preference number: 5 (lower is better)
Translates to: QERKCREHRGVFCSVAQNKYGGE*QMRRQT
Trigger: GGTCTGCCTCCTCATCTGCAACTCACCCCCATACTT...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS GCA 90 bp ACTTCTCTGAGCCTCGGTTTCCTGCCTGAGACAGACCCTGCTAGCTaGCTATTCCATATCCAAGTGTCCTCCTCCCCTGCATTCCCAATG +
Preference number: 5 (lower is better)
Translates to: TSLSLGFLPETDPAS*LFHIQVSSSPAFPM
Trigger: CATTGGGAATGCAGGGGAGGAGGACACTTGGATATGGAATAGGCAGCTAGCAGGGTCTGTCTCAGGCAGGAAACCGAGGCTCAGAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 90 bp TCATTCTTGGATCCTATGTCTTTACTTCCCAGGAGCACTCGGTCTTaGTGCTCTAGCCCAGGAGCTGCTGGGACACTCAGTCCAGACCTC +
Preference number: 5 (lower is better)
Translates to: SFLDPMSLLPRSTRS*CSSPGAAGTLSPDL
Trigger: GAGGTCTGGACTGAGTGTCCCAGCAGCTCCTGGGCTAGAGCACCAAGACCGAGTGCTCCTGGGAAGTAAAGACATAGGATCCAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 90 bp AGTGGATCCCCCGCTCCCCAATCTGCTGCACAAGATTCTCAGTTGTaGATCCAGAGTACGTGGTGCTCTCAACAGCAGGCAACAAGTATG +
Preference number: 5 (lower is better)
Translates to: SGSPAPQSAAQDSQL*IQSTWCSQQQATSM
Trigger: CATACTTGTTGCCTGCTGTTGAGAGCACCACGTACTCTGGATGCACAACTGAGAATCTTGTGCAGCAGATTGGGGAGCGGGGGATCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS GCA 90 bp AATAGCTGGCCCCCTCTAGATGTCCTGTCCTGTGCAAAATATAAATaGCTGCTCCTACAACGCCTGCCCTCTCAGAACCCAGCTGCCACA +
Preference number: 5 (lower is better)
Translates to: NSWPPLDVLSCAKYK*LLLQRLPSQNPAAT
Trigger: TGTGGCAGCTGGGTTCTGAGAGGGCAGGCGTTGTAGGAGCAGGCATTTATATTTTGCACAGGACAGGACATCTAGAGGGGGCCAGCTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS-3UTR CAA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACCCCTTTTTCAGTTCGTaGAGGATGGCATCTCGAGTC +
Preference number: 5 (lower is better)
Translates to: QERKCREHRGVFCSVAQNPFFSS*RMASRV
Trigger: GACTCGAGATGCCATCCTCAACGAACTGAAAAAGGG...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS TCA 90 bp GCCGGAAGTACTAACTCTCAGGAATGCCTTCTTCACAAGGTTCTGTaGGGGTCTCGTGAGGTGATCCCCCTAAGGTTCTCTTTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AGSTNSQECLLHKVL*GSREVIPLRFSFLQ
Trigger: CTGCAGGAAAGAGAACCTTAGGGGGATCACCTCACGAGACCCTCACAGAACCTTGTGAAGAAGGCATTCCTGAGAGTTAGTACTTCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 90 bp CCCCAATCTGCTGCACAAGATTCTCAGTTGTGCATCCAGAGTACGTaGTGCTCTCAACAGCAGGCAACAAGTATGGGGGTGAGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: PQSAAQDSQLCIQST*CSQQQATSMGVSCR
Trigger: TCTGCAACTCACCCCCATACTTGTTGCCTGCTGTTGAGAGCACCACGTACTCTGGATGCACAACTGAGAATCTTGTGCAGCAGATTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS-3UTR CAA 90 bp AGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAGCACAAGATTCTCAGTaGTGCATCCAGAGTACGTGG +
Preference number: 5 (lower is better)
Translates to: RSGSVESIAVCSVQLLRTAQDSQ*CIQSTW
Trigger: CCACGTACTCTGGATGCACAACTGAGAATCTTGTGC...TGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCAGGGGGACTGGCTGCTTaGACTGGAGGGGGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSGGLAA*TGGGLG
Trigger: CCCCAGGCCCCCTCCAGTCAAAGCAGCCAGTCCCCC...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp TGCCCGTTAGACTTAAATAACGGTCTCAACAGTCATGTGTTTCTGTGCAGGACATCCGGGAGCAGCTTGTaGGAGAGGGGTGATGGGCGA +
Preference number: 5 (lower is better)
Translates to: CPLDLNNGLNSHVFLCRTSGSSL*ERGDGR
Trigger: TCGCCCATCACCCCTCTCCAACAAGCTGCTCCCGGA...TGTCCTGCACAGAAACACATGACTGTTGAGACCGTTATTTAAGTCTAACGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp AGTTGTGCTTCGGAACTCTGGCCAGTCTATGTGAAACTTTTCTCTCAATATACATGCGGCGGTGGTGGGTaGAGGAGGAGGCTTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SCASELWPVYVKLFSQYTCGGGG*RRRLRS
Trigger: GCTGCGAAGCCTCCTCCTCAACCCACCACCGCCGCA...TGTATATTGAGAGAAAAGTTTCACATAGACTGGCCAGAGTTCCGAAGCACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS TCA 90 bp CCTAGGTCCGGGATAGGAGGTGAAAGGAATGCCTGCTCTGGAATCTaGGAAAGTTTCTGCTGTCTTGAAGAAAGGGAAACACACAGCCCC +
Preference number: 5 (lower is better)
Translates to: PRSGIGGERNACSGI*ESFCCLEERETHSP
Trigger: GGGGCTGTGTGTTTCCCTTTCTTCAAGACAGCAGAAACTTTCTCAGATTCCAGAGCAGGCATTCCTTTCACCTCCTATCCCGGACCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS-3UTR CAA 90 bp CATCTGCCAACAAAGGCAAACTGGACAATGTCTGTTCCTTCTCATGAGTCTGGACCAGCCTTCTGGTTCTaGGCAGCCTCCACTGCATTC +
Preference number: 5 (lower is better)
Translates to: HLPTKANWTMSVPSHESGPAFWF*AASTAF
Trigger: GAATGCAGTGGAGGCTGCCAAGAACCAGAAGGCTGG...TCCAGACTCATGAGAAGGAACAGACATTGTCCAGTTTGCCTTTGTTGGCAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp CAGGAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACTGCTCCTTTATAAACTaGCCATCTGCTGTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QERKCREHRGVFCSVAQNCSFIN*PSAVAL
Trigger: CAGAGCTACAGCAGATGGCAAGTTTATAAAGGAGCA...GTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTAGTCCTTTCCCAGTGTaGGGCCTGCCTTGGCACCAT +
Preference number: 5 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPSPFPV*GLPWHH
Trigger: ATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGACT...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS CCA 90 bp GCCCTGTCCCTGATGTCACAGACCTATGAAACCAATCCCAATAGCTaGCCCCCTCTAGATGTCCTGTCCTGTGCAAAATATAAATGCCTG +
Preference number: 5 (lower is better)
Translates to: ALSLMSQTYETNPNS*PPLDVLSCAKYKCL
Trigger: CAGGCATTTATATTTTGCACAGGACAGGACATCTAGAGGGGGCCAGCTATTGGGATTGGTTTCATAGGTCTGTGACATCAGGGACAGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS-3UTR CAA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGAGCCCGAGGGGGAAGTaGTGCGGGCCAGGACTGGGC +
Preference number: 5 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWSPRGK*CGPGLG
Trigger: GCCCAGTCCTGGCCCGCACAACTTCCCCCTCGGGCT...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp AAATTAGTCCTTTCCCAGTGTTGGGCCTGCCTTGGCACCATGCCACAGACTTCTCATCTTCACACAGACTaGTATTTAGGAACCAGCGCC +
Preference number: 5 (lower is better)
Translates to: KLVLSQCWACLGTMPQTSHLHTD*YLGTSA
Trigger: GGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATG...AGAAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACTGGGAAAGGACTAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp ATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCGCCGCGCAGTCCACTGTGTaGAACACCACGAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: IVVESHHLHTDLYLGTSAAQSTV*NTTRLY
Trigger: GTACAGCCTCGTGGTGTTCAACACAGTGGACTGCGC...GGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp GAGCGGAAGTGTCGAGAGCATCGCGGTGTGTTCTGTTCAGTTGCTCAGAACAAGAAGGCCACAATCAATTaGACTCTTTCAAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: ERKCREHRGVFCSVAQNKKATIN*TLSSNW
Trigger: CCAGTTGCTTGAAAGAGTCAAATTGATTGTGGCCTT...CTTGTTCTGAGCAACTGAACAGAACACACCGCGATGCTCTCGACACTTCCGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp ATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCGCCTCCACTGAGGCAGGTTaGGGTTTCTCTTGCCACTCC +
Preference number: 5 (lower is better)
Translates to: IVVESHHLHTDLYLGTSASTEAG*GFSCHS
Trigger: GGAGTGGCAAGAGAAACCCAAACCTGCCTCAGTGGA...GGCGCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCACGCGTCAGCTTGGTGTaGGCATCCACTGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSRVSLV*ASTEAG
Trigger: ACCTGCCTCAGTGGATGCCAACACCAAGCTGACGCG...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp GGTGGCACGGTGGGGACGGGCAGTTTAGAATTCAGCCTTGAATCCTTCAACTGGACAGACACGATTTGTTaGCATATTAAACACATAGGC +
Preference number: 5 (lower is better)
Translates to: GGTVGTGSLEFSLESFNWTDTIC*HIKHIG
Trigger: GCCTATGTGTTTAATATGCAAACAAATCGTGTCTGT...CCAGTTGAAGGATTCAAGGCTGAATTCTAAACTGCCCGTCCCCACCGTGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp CCCAGGACCAAGCATACACCATCATACATTCAAGTAGCTGTTTGTGGACATCCTGGATTCCGAGAGCCTTaGGGGGAATTTGGTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PRTKHTPSYIQVAVCGHPGFREP*GEFGLQ
Trigger: TTGAAGACCAAATTCCCCCAAAGGCTCTCGGAATCC...AGGATGTCCACAAACAGCTACTTGAATGTATGATGGTGTATGCTTGGTCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp ACACAGATATTCAGGACAACTACTGGAGATAGTTGTAGAATCTCACCATCTTCAAGTGTTGGGCCTGCCTaGGCACCATGCCACAGACTT +
Preference number: 5 (lower is better)
Translates to: TQIFRTTTGDSCRISPSSSVGPA*APCHRL
Trigger: AAGTCTGTGGCATGGTGCCAAGGCAGGCCCAACACT...TGAAGATGGTGAGATTCTACAACTATCTCCAGTAGTTGTCCTGAATATCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp CATTCAAGTAGCTGTTTGTGGACATCCTTGCGGAGAAATATTCAGTGTTCAGAAAGCCTTTGGGGGAATTaGGTCTTCAACCCCAGGACG +
Preference number: 5 (lower is better)
Translates to: HSSSCLWTSLRRNIQCSESLWGN*VFNPRT
Trigger: CGTCCTGGGGTTGAAGACCAAATTCCCCCAAAGGCT...TTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGGGTGGGAGCGTGACATaGTACGTAGGACTCGGGAGC +
Preference number: 5 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWGGSVT*YVGLGS
Trigger: GCTCCCGAGTCCTACGTACAATGTCACGCTCCCACC...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGAGGTTTGGGTTTCTCTaGCCACTCCAGGACCCCGCT +
Preference number: 5 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWRFGFL*PLQDPA
Trigger: AGCGGGGTCCTGGAGTGGCAAGAGAAACCCAAACCT...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp GAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGCAGAGACTCCAGGTCCTaGTTGGTGAAATGGAACTGG +
Preference number: 5 (lower is better)
Translates to: EIVVESHHLHTDLYLGTSRDSRS*LVKWNW
Trigger: CCAGTTCCATTTCACCAACAAGGACCTGGAGTCTCT...GCTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp CAAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGCAGGCCAGAAGCTTATaGGAGACTGACTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: QIGSLLNYGECMEHNTNMQARSL*ETDCCP
Trigger: TGGGCAGCAGTCAGTCTCCAATAAGCTTCTGGCCTG...CATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp CATCTGCCAACAAAGGCAAACTGGACAATGTCTGTTCCTTCTCATGAGTCTGGAAGCTCTTACTATGCTTaGATTCATAGTGGCGTTTCA +
Preference number: 5 (lower is better)
Translates to: HLPTKANWTMSVPSHESGSSYYA*IHSGVS
Trigger: TGAAACGCCACTATGAATCAAAGCATAGTAAGAGCT...TCCAGACTCATGAGAAGGAACAGACATTGTCCAGTTTGCCTTTGTTGGCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp GGAGATAGTTGTAGAATCTCACCATCTTCACACAGACTTGTATTTAGGAACCAGGTGTGTTCTGTTCAGTaGCTCAGAACAAGTCAACTC +
Preference number: 5 (lower is better)
Translates to: GDSCRISPSSHRLVFRNQVCSVQ*LRTSQL
Trigger: GAGTTGACTTGTTCTGAGCAACTGAACAGAACACAC...CTGGTTCCTAAATACAAGTCTGTGTGAAGATGGTGAGATTCTACAACTATCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp AAATCGGATCTTTACTCAACTATGGTGAATGCATGGAACATAATACAAACATGGCTTGACCAGAAGTCTTaGACTAACCTTCTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: KSDLYSTMVNAWNIIQTWLDQKS*TNLLRG
Trigger: TCCCCTGAGAAGGTTAGTCAAAGACTTCTGGTCAAG...CCATGTTTGTATTATGTTCCATGCATTCACCATAGTTGAGTAAAGATCCGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS-3UTR CAA 90 bp CATTCAAGTAGCTGTTTGTGGACATCCTTGCGGAGAAATATTCAGTGTTCAGAAGGAACGATGTTTAATTaGATTCAGGTTCGTAACGGA +
Preference number: 5 (lower is better)
Translates to: HSSSCLWTSLRRNIQCSEGTMFN*IQVRNG
Trigger: TCCGTTACGAACCTGAATCAAATTAAACATCGTTCC...TTCTGAACACTGAATATTTCTCCGCAAGGATGTCCACAAACAGCTACTTGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS GCA 72 bp GCGGGCCGGGCCCTCGGACCCGGGGACCATACCCCGTaGGGTACCCGCCACCACCACTGCAGCCGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: AGRALGPGDHTP*GTRHHHCSRSR
Trigger: TCGGCTGCGGCTGCAGTGGTGGTGGCGGGTACCGCACGGGGTATGGTCCCCGGGTCCGAGGGCCCGGCCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000312865.10
ENST00000593595.1
ENST00000593636.1
ENST00000593767.3
CDS CCA 72 bp GCGGTGGGCGGAGCTGGAGCAGATTCTGTGAGGGCCTaGCTTGGTCCTCCAGAATGGGCCCCAGCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: AVGGAGADSVRA*LGPPEWAPALG
Trigger: CCCCAGGGCTGGGGCCCATTCTGGAGGACCAAGCCAGGCCCTCACAGAATCTGCTCCAGCTCCGCCCACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000312865.10
ENST00000538643.5
ENST00000593767.3
ENST00000594998.1
CDS TCA 72 bp GGGGACCCACTCCGGGAGCAGCTTGTTGGAGAGGGGTaGTGGGCGAGAAGCGAGGGCCCAGCCCAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: GDPLREQLVGEG*WARSEGPAQPS
Trigger: AGAAGGCTGGGCTGGGCCCTCGCTTCTCGCCCATCACCCCTCTCCAACAAGCTGCTCCCGGAGTGGGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000538643.5
ENST00000593767.3
CDS GCA 72 bp GGCAGCCTCCACTGCATTCTGCGCGGCCACCTGAGCTaGACTCAGGTTCCCGGGAACCTGGTACTGCGGGGG +
Preference number: 6 (lower is better)
Translates to: GSLHCILRGHLS*TQVPGNLVLRG
Trigger: CCCCCGCAGTACCAGGTTCCCGGGAACCTGAGTGCAGCTCAGGTGGCCGCGCAGAATGCAGTGGAGGCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000312865.10
ENST00000593767.3
CDS GCA 72 bp CCGGCAGGCAGCACGAGTCCCCGAACCAGCACCATGTaGCTCGGGTCCTGGCTCACATCTGTCGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PAGSTSPRTSTM*LGSWLTSVGGC
Trigger: GCAGCCTCCGACAGATGTGAGCCAGGACCCGAGGCACATGGTGCTGGTTCGGGGACTCGTGCTGCCTGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595185.5
CDS CAA 72 bp GGTCCCCTTACCTGGCAGTGGAGCCCGAGGGGGAAGTaGTGCGGGCCAGGACTGGGCAGGTGGTGGATGCAG +
Preference number: 6 (lower is better)
Translates to: GPLTWQWSPRGK*CGPGLGRWWMQ
Trigger: CTGCATCCACCACCTGCCCAGTCCTGGCCCGCACAACTTCCCCCTCGGGCTCCACTGCCAGGTAAGGGGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 72 bp GGCAGCCTCCACTGCATTCTGCGCGGCCACCTGAGCTaGACTCAGGTTCCCGGGAACGTCTCCCCCGAAGTC +
Preference number: 6 (lower is better)
Translates to: GSLHCILRGHLS*TQVPGNVSPEV
Trigger: GACTTCGGGGGAGACGTTCCCGGGAACCTGAGTGCAGCTCAGGTGGCCGCGCAGAATGCAGTGGAGGCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538643.5
CDS CCA 72 bp ACGAGTCCCCGAACCAGCACCATGTGCCTCGGGTCCTaGCTCACATCTGTCGGAGGCTGCAGCGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: TSPRTSTMCLGS*LTSVGGCSGSS
Trigger: GCTGGAGCCGCTGCAGCCTCCGACAGATGTGAGCCAGGACCCGAGGCACATGGTGCTGGTTCGGGGACTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS CCA 72 bp GTGGCCACGTGGACAGGCCATGTGCAGACACTGGGATaGCCGGTCCTAGCCAAGCCCCAGCCAACAGCCAGG +
Preference number: 6 (lower is better)
Translates to: VATWTGHVQTLG*PVLAKPQPTAR
Trigger: CCTGGCTGTTGGCTGGGGCTTGGCTAGGACCGGCCATCCCAGTGTCTGCACATGGCCTGTCCACGTGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp GGGTCACGGCCGGGAGAGCGGCCTAGATGCACAGCGTaGTACCCACAGGCCTGTGATCAACGGTGGGTCGGA +
Preference number: 6 (lower is better)
Translates to: GSRPGERPRCTA*YPQACDQRWVG
Trigger: TCCGACCCACCGTTGATCACAGGCCTGTGGGTACCACGCTGTGCATCTAGGCCGCTCTCCCGGCCGTGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CAA 72 bp CAGCATCTGACCTGGCAGTGGAGCCCGAGGGGGAAGTaGTGCGGGCCAGGACTGGGCAGGTGGTGGATGCAG +
Preference number: 6 (lower is better)
Translates to: QHLTWQWSPRGK*CGPGLGRWWMQ
Trigger: CTGCATCCACCACCTGCCCAGTCCTGGCCCGCACAACTTCCCCCTCGGGCTCCACTGCCAGGTCAGATGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000312865.10
ENST00000538643.5
CDS GCA 72 bp CCAACAGGCAGCACGAGTCCCCGAACCAGCACCATGTaGCTCGGGTCCTGGCTCACATCTGTCGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PTGSTSPRTSTM*LGSWLTSVGGC
Trigger: GCAGCCTCCGACAGATGTGAGCCAGGACCCGAGGCACATGGTGCTGGTTCGGGGACTCGTGCTGCCTGTTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312865.10
ENST00000593767.3
CDS CCA 72 bp GCCCTCTCAGAACCCAGCTGCCACAGTGTGGCCACGTaGACAGGCCATGTGCAGACACTGGGATGGCCGGTC +
Preference number: 6 (lower is better)
Translates to: ALSEPSCHSVAT*TGHVQTLGWPV
Trigger: GACCGGCCATCCCAGTGTCTGCACATGGCCTGTCCACGTGGCCACACTGTGGCAGCTGGGTTCTGAGAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp GCCCTCTCCTTCTCTCTTTCGTTTTGCCGCTGGCAGTaGAGCCCGAGGGGGAAGTTGTGCGGGCCAGGACTG +
Preference number: 6 (lower is better)
Translates to: ALSFSLSFCRWQ*SPRGKLCGPGL
Trigger: CAGTCCTGGCCCGCACAACTTCCCCCTCGGGCTCCACTGCCAGCGGCAAAACGAAAGAGAGAAGGAGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS TCA 72 bp AGGCGCTCAGGGCAAGCTAGGGTTCCAGCTGCCCACTaGGAGGGAAAGCGGAGAGAAAGTGCTGGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: RRSGQARVPAAH*EGKRRESAGAQ
Trigger: CTGGGCTCCAGCACTTTCTCTCCGCTTTCCCTCTCAGTGGGCAGCTGGAACCCTAGCTTGCCCTGAGCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp CAACGCCTGCCCTCTCAGAACCCAGCTGCCACAGTGTaGCCACGTGGACAGGCCATGTGCAGACACTGGGAT +
Preference number: 6 (lower is better)
Translates to: QRLPSQNPAATV*PRGQAMCRHWD
Trigger: ATCCCAGTGTCTGCACATGGCCTGTCCACGTGGCCACACTGTGGCAGCTGGGTTCTGAGAGGGCAGGCGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp CTCCCAGCAGCCTCCCATCAACTAGGGGCTGCCCAGTaGCCTAGGTCCGGGATAGGAGGTGAAAGGAATGCC +
Preference number: 6 (lower is better)
Translates to: LPAASHQLGAAQ*PRSGIGGERNA
Trigger: GGCATTCCTTTCACCTCCTATCCCGGACCTAGGCCACTGGGCAGCCCCTAGTTGATGGGAGGCTGCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp TGCACAGCGTGGTACCCACAGGCCTGTGATCAACGGTaGGTCGGACCCCGGGTATCCAAGAGATCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: CTAWYPQACDQR*VGPRVSKRSSS
Trigger: GCTGGAGGATCTCTTGGATACCCGGGGTCCGACCCACCGTTGATCACAGGCCTGTGGGTACCACGCTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp AGTGCTTGCGGAGCCCCTCGAAGTAGGGTCCCAGGTTaGCCGTACCCTCAATCACAAACACCACGTCGGCCA +
Preference number: 6 (lower is better)
Translates to: SACGAPRSRVPG*PYPQSQTPRRP
Trigger: TGGCCGACGTGGTGTTTGTGATTGAGGGTACGGCCAACCTGGGACCCTACTTCGAGGGGCTCCGCAAGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000312865.10
ENST00000538643.5
ENST00000593595.1
ENST00000593636.1
ENST00000593767.3
ENST00000595185.5
CDS CAA 90 bp CCCATTTTTCTCGAAACACACGGCCCTCTCCTTCTCTCTTTCGTTTaGCCGCTGGCAGTGGAGCCCGAGGGGGAAGTTGTGCGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PIFLETHGPLLLSFV*PLAVEPEGEVVRAR
Trigger: CCTGGCCCGCACAACTTCCCCCTCGGGCTCCACTGCCAGCGGCAAAACGAAAGAGAGAAGGAGAGGGCCGTGTGTTTCGAGAAAAATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS CAA 90 bp CTCTTCAACCTTCAGCCACCACCTGCTCCTCATGGACCCAGTTTCTaGGGCATAAAATGCCACGGCGGCCTCCTCAGAGGGCGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LFNLQPPPAPHGPSF*GIKCHGGLLRGRLR
Trigger: CCTCAGCCGCCCTCTGAGGAGGCCGCCGTGGCATTTTATGCCCAAGAAACTGGGTCCATGAGGAGCAGGTGGTGGCTGAAGGTTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS TCA 72 bp CGTGGTGCTCTCAACAGCAGGCAACAAGTATGGGGGTaGGTTGCAGATGAGGAGGCAGACCCGGTGCGTCTG +
Preference number: 6 (lower is better)
Translates to: RGALNSRQQVWG*VADEEADPVRL
Trigger: CAGACGCACCGGGTCTGCCTCCTCATCTGCAACTCACCCCCATACTTGTTGCCTGCTGTTGAGAGCACCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS GCA 72 bp TCGAAACACACGGCCCTCTCCTTCTCTCTTTCGTTTTaGCGCTGGCAGTGGAGCCCGAGGGGGAAGTTGTGC +
Preference number: 6 (lower is better)
Translates to: SKHTALSFSLSF*RWQWSPRGKLC
Trigger: GCACAACTTCCCCCTCGGGCTCCACTGCCAGCGGCAAAACGAAAGAGAGAAGGAGAGGGCCGTGTGTTTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS CCA 72 bp AGACCTGGCAGGGCAGTGACCGCGTCAGCTTGGTGTTaGCATCCACTGAGGCAGGTTTGGGTTTCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: RPGRAVTASAWC*HPLRQVWVSLA
Trigger: GGCAAGAGAAACCCAAACCTGCCTCAGTGGATGCCAACACCAAGCTGACGCGGTCACTGCCCTGCCAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312865.10
ENST00000538643.5
ENST00000593767.3
ENST00000599722.1
CDS CAA 72 bp GTGCTCTCAACAGCAGGCAACAAGTATGGGGGTGAGTaGCAGATGAGGAGGCAGACCCGGTGCGTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: VLSTAGNKYGGE*QMRRQTRCVWP
Trigger: TGGCCAGACGCACCGGGTCTGCCTCCTCATCTGCAACTCACCCCCATACTTGTTGCCTGCTGTTGAGAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS CAA 72 bp CTCGAAACACACGGCCCTCTCCTTCTCTCTTTCGTTTaGCCGCTGGCAGTGGAGCCCGAGGGGGAAGTTGTG +
Preference number: 6 (lower is better)
Translates to: LETHGPLLLSFV*PLAVEPEGEVV
Trigger: CACAACTTCCCCCTCGGGCTCCACTGCCAGCGGCAAAACGAAAGAGAGAAGGAGAGGGCCGTGTGTTTCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593767.3
CDS CAA 72 bp CTTCAGCCACCACCTGCTCCTCATGGACCCAGTTTCTaGGGCATAAAATGCCACGGCGGCCTCCTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: LQPPPAPHGPSF*GIKCHGGLLRG
Trigger: CCCTCTGAGGAGGCCGCCGTGGCATTTTATGCCCAAGAAACTGGGTCCATGAGGAGCAGGTGGTGGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CAA 90 bp GAGTACGTGGTGCTCTCAACAGCAGGCAACAAGTATGGGGGTGAGTaGCAGATGAGGAGGCAGACCCGGTGCGTCTGGCCAATCTGCTCG +
Preference number: 6 (lower is better)
Translates to: EYVVLSTAGNKYGGE*QMRRQTRCVWPICS
Trigger: CGAGCAGATTGGCCAGACGCACCGGGTCTGCCTCCTCATCTGCAACTCACCCCCATACTTGTTGCCTGCTGTTGAGAGCACCACGTACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS CAA 90 bp GAGCCAGGTGACAAACTCATAGGCGCTGCTGGTGGGAGCGTGACATaGTACGTAGGACTCGGGAGCGCAGTCCACTGTGTTGAACACCAC +
Preference number: 6 (lower is better)
Translates to: EPGDKLIGAAGGSVT*YVGLGSAVHCVEHH
Trigger: GTGGTGTTCAACACAGTGGACTGCGCTCCCGAGTCCTACGTACAATGTCACGCTCCCACCAGCAGCGCCTATGAGTTTGTCACCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312865.10
ENST00000593636.1
ENST00000593767.3
ENST00000595185.5
CDS CAA 90 bp CGGAGCCCTCAGAGCTCCGCAAAGGCCATGGGGGAACCCTCATTCTaGGATCCTATGTCTTTACTTCCCAGGAGCACTCGGTCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: RSPQSSAKAMGEPSF*DPMSLLPRSTRSWC
Trigger: GCACCAAGACCGAGTGCTCCTGGGAAGTAAAGACATAGGATCCAAGAATGAGGGTTCCCCCATGGCCTTTGCGGAGCTCTGAGGGCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 72 bp TATGGGGGTGAGTTGCAGATGAGGAGGCAGACCCGGTaGGTCTGGCCAATCTGCTCGCGCATCTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: YGGELQMRRQTR*VWPICSRIFLK
Trigger: CTTCAAGAAGATGCGCGAGCAGATTGGCCAGACGCACCGGGTCTGCCTCCTCATCTGCAACTCACCCCCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS TCA 72 bp GTCCTAGCCAAGCCCCAGCCAACAGCCAGGGCTGTGTaGGGAGCTGTTTTGAACATCCAGCCCAGTAAAGGT +
Preference number: 6 (lower is better)
Translates to: VLAKPQPTARAV*GAVLNIQPSKG
Trigger: ACCTTTACTGGGCTGGATGTTCAAAACAGCTCCTCACACAGCCCTGGCTGTTGGCTGGGGCTTGGCTAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 72 bp AGCCTCGGTTTCCTGCCTGAGACAGACCCTGCTAGCTaGCTATTCCATATCCAAGTGTCCTCCTCCCCTGCA +
Preference number: 6 (lower is better)
Translates to: SLGFLPETDPAS*LFHIQVSSSPA
Trigger: TGCAGGGGAGGAGGACACTTGGATATGGAATAGGCAGCTAGCAGGGTCTGTCTCAGGCAGGAAACCGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 72 bp CCTATGTCTTTACTTCCCAGGAGCACTCGGTCTTGGTaGTCTAGCCCAGGAGCTGCTGGGACACTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: PMSLLPRSTRSW*SSPGAAGTLSP
Trigger: TGGACTGAGTGTCCCAGCAGCTCCTGGGCTAGAGCACCAAGACCGAGTGCTCCTGGGAAGTAAAGACATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CAA 72 bp GACAAACTCATAGGCGCTGCTGGTGGGAGCGTGACATaGTACGTAGGACTCGGGAGCGCAGTCCACTGTGTT +
Preference number: 6 (lower is better)
Translates to: DKLIGAAGGSVT*YVGLGSAVHCV
Trigger: AACACAGTGGACTGCGCTCCCGAGTCCTACGTACAATGTCACGCTCCCACCAGCAGCGCCTATGAGTTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000312865.10
ENST00000593636.1
ENST00000593767.3
ENST00000595185.5
CDS GCA 72 bp CCCGCTCCCCAATCTGCTGCACAAGATTCTCAGTTGTaGATCCAGAGTACGTGGTGCTCTCAACAGCAGGCA +
Preference number: 6 (lower is better)
Translates to: PAPQSAAQDSQL*IQSTWCSQQQA
Trigger: TGCCTGCTGTTGAGAGCACCACGTACTCTGGATGCACAACTGAGAATCTTGTGCAGCAGATTGGGGAGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS CCA 72 bp GATCCTATGTCTTTACTTCCCAGGAGCACTCGGTCTTaGTGCTCTAGCCCAGGAGCTGCTGGGACACTCAGT +
Preference number: 6 (lower is better)
Translates to: DPMSLLPRSTRS*CSSPGAAGTLS
Trigger: ACTGAGTGTCCCAGCAGCTCCTGGGCTAGAGCACCAAGACCGAGTGCTCCTGGGAAGTAAAGACATAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp AGGATCATGGGAAACGCTCTTAACCCACTAGGTCCTTaGACCCATGGGCTGTACTTTCCCGGAGCCCTCAGA +
Preference number: 6 (lower is better)
Translates to: RIMGNALNPLGP*THGLYFPGALR
Trigger: TCTGAGGGCTCCGGGAAAGTACAGCCCATGGGTCCAAGGACCTAGTGGGTTAAGAGCGTTTCCCATGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CAA 72 bp TCCCCCGCTCCCCAATCTGCTGCACAAGATTCTCAGTaGTGCATCCAGAGTACGTGGTGCTCTCAACAGCAG +
Preference number: 6 (lower is better)
Translates to: SPAPQSAAQDSQ*CIQSTWCSQQQ
Trigger: CTGCTGTTGAGAGCACCACGTACTCTGGATGCACAACTGAGAATCTTGTGCAGCAGATTGGGGAGCGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS CAA 72 bp CAGAGCTCCGCAAAGGCCATGGGGGAACCCTCATTCTaGGATCCTATGTCTTTACTTCCCAGGAGCACTCGG +
Preference number: 6 (lower is better)
Translates to: QSSAKAMGEPSF*DPMSLLPRSTR
Trigger: CCGAGTGCTCCTGGGAAGTAAAGACATAGGATCCAAGAATGAGGGTTCCCCCATGGCCTTTGCGGAGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS TCA 72 bp CCCAGCCAACAGCCAGGGCTGTGTGAGGAGCTGTTTTaGACATCCAGCCCAGTAAAGGTTTCAGATGACCAG +
Preference number: 6 (lower is better)
Translates to: PSQQPGLCEELF*TSSPVKVSDDQ
Trigger: CTGGTCATCTGAAACCTTTACTGGGCTGGATGTTCAAAACAGCTCCTCACACAGCCCTGGCTGTTGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 72 bp ATCTGCTCGCGCATCTTCTTGAAGTCATCAAACAGCTaGAAGGCTGTGCTGAGTCCTTCCGCGATGAGGCTG +
Preference number: 6 (lower is better)
Translates to: ICSRIFLKSSNS*KAVLSPSAMRL
Trigger: CAGCCTCATCGCGGAAGGACTCAGCACAGCCTTGCAGCTGTTTGATGACTTCAAGAAGATGCGCGAGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS GCA 72 bp CACAGAGGGATCTATCCTGGCTCTGACCCATCCCCCTaGACTGAGGCTACAATGTACCCATCTGGAAAAGGA +
Preference number: 6 (lower is better)
Translates to: HRGIYPGSDPSP*TEATMYPSGKG
Trigger: TCCTTTTCCAGATGGGTACATTGTAGCCTCAGTGCAGGGGGATGGGTCAGAGCCAGGATAGATCCCTCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593636.1
CDS CCA 72 bp AGAGCTCCGCAAAGGCCATGGGGGAACCCTCATTCTTaGATCCTATGTCTTTACTTCCCAGGAGCACTCGGT +
Preference number: 6 (lower is better)
Translates to: RAPQRPWGNPHS*ILCLYFPGALG
Trigger: ACCGAGTGCTCCTGGGAAGTAAAGACATAGGATCCAAGAATGAGGGTTCCCCCATGGCCTTTGCGGAGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CAA 90 bp AGAAGTGGATCCCCCGCTCCCCAATCTGCTGCACAAGATTCTCAGTaGTGCATCCAGAGTACGTGGTGCTCTCAACAGCAGGCAACAAGT +
Preference number: 6 (lower is better)
Translates to: RSGSPAPQSAAQDSQ*CIQSTWCSQQQATS
Trigger: ACTTGTTGCCTGCTGTTGAGAGCACCACGTACTCTGGATGCACAACTGAGAATCTTGTGCAGCAGATTGGGGAGCGGGGGATCCACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS TCA 72 bp GGAATGCCTTCTTCACAAGGTTCTGTGAGGGTCTCGTaGGGTGATCCCCCTAAGGTTCTCTTTCCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: GMPSSQGSVRVS*GDPPKVLFPAG
Trigger: TCCTGCAGGAAAGAGAACCTTAGGGGGATCACCTCACGAGACCCTCACAGAACCTTGTGAAGAAGGCATTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp GCTGCACAAGATTCTCAGTTGTGCATCCAGAGTACGTaGTGCTCTCAACAGCAGGCAACAAGTATGGGGGTG +
Preference number: 6 (lower is better)
Translates to: AAQDSQLCIQST*CSQQQATSMGV
Trigger: CACCCCCATACTTGTTGCCTGCTGTTGAGAGCACCACGTACTCTGGATGCACAACTGAGAATCTTGTGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS CCA 72 bp CCCCTTCCCCTCCTTCATGAAAGCACACAGGATGCGTaGAGCCATGAGAGCTACCTTGTGACTATAAAGGAG +
Preference number: 6 (lower is better)
Translates to: PLPLLHESTQDA*SHESYLVTIKE
Trigger: CTCCTTTATAGTCACAAGGTAGCTCTCATGGCTCCACGCATCCTGTGTGCTTTCATGAAGGAGGGGAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS GCA 72 bp GCACAAGATTCTCAGTTGTGCATCCAGAGTACGTGGTaGTCTCAACAGCAGGCAACAAGTATGGGGGTGAGT +
Preference number: 6 (lower is better)
Translates to: AQDSQLCIQSTW*SQQQATSMGVS
Trigger: ACTCACCCCCATACTTGTTGCCTGCTGTTGAGAGCACCACGTACTCTGGATGCACAACTGAGAATCTTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000312865.10
ENST00000593767.3
ENST00000595185.5
CDS TCA 72 bp ACTAACTCTCAGGAATGCCTTCTTCACAAGGTTCTGTaGGGGTCTCGTGAGGTGATCCCCCTAAGGTTCTCT +
Preference number: 6 (lower is better)
Translates to: TNSQECLLHKVL*GSREVIPLRFS
Trigger: AGAGAACCTTAGGGGGATCACCTCACGAGACCCTCACAGAACCTTGTGAAGAAGGCATTCCTGAGAGTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp TTCTGCTATAGAAGGTTAAGGAGAACAGGTGTGCTATaGGTTGCTCTGGAGACAGAAACTGAGGCGCTCAGG +
Preference number: 6 (lower is better)
Translates to: FCYRRLRRTGVL*VALETETEALR
Trigger: CCTGAGCGCCTCAGTTTCTGTCTCCAGAGCAACCCATAGCACACCTGTTCTCCTTAACCTTCTATAGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp GTTCCAGTCCCCAGCACCTGTGAAGGTGACTCTATCTaGAAAGAGGGTCTTTGCAATTGTAGTAAGATGAGG +
Preference number: 6 (lower is better)
Translates to: VPVPSTCEGDSI*KEGLCNCSKMR
Trigger: CCTCATCTTACTACAATTGCAAAGACCCTCTTTCCAGATAGAGTCACCTTCACAGGTGCTGGGGACTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS CCA 72 bp CTGATGTCACAGACCTATGAAACCAATCCCAATAGCTaGCCCCCTCTAGATGTCCTGTCCTGTGCAAAATAT +
Preference number: 6 (lower is better)
Translates to: LMSQTYETNPNS*PPLDVLSCAKY
Trigger: ATATTTTGCACAGGACAGGACATCTAGAGGGGGCCAGCTATTGGGATTGGTTTCATAGGTCTGTGACATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000594998.1
CDS TCA 72 bp CAATCACCCTCAAAGTCCTTTCAATCCCTTAATGTATaGGATGTTTCCTGCAGCTCAAACCCAAGCCATCGC +
Preference number: 6 (lower is better)
Translates to: QSPSKSFQSLNV*DVSCSSNPSHR
Trigger: GCGATGGCTTGGGTTTGAGCTGCAGGAAACATCTCATACATTAAGGGATTGAAAGGACTTTGAGGGTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593636.1