RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED24 (Homo sapiens)

Ensembl gene IDs: ENSG00000008838

Ensembl transcript IDs: ENST00000356271.7, ENST00000394126.5, ENST00000394127.6, ENST00000394128.7, ENST00000422942.6, ENST00000428757.6, ENST00000470126.1, ENST00000479829.5, ENST00000491466.5, ENST00000495586.1, ENST00000501516.7, ENST00000535071.6, ENST00000535508.6, ENST00000537674.6, ENST00000543759.6, ENST00000578161.2, ENST00000578901.1, ENST00000579364.1, ENST00000580008.5, ENST00000580302.1, ENST00000580517.5, ENST00000580885.5, ENST00000580921.5, ENST00000581054.1, ENST00000581058.5, ENST00000582023.5, ENST00000584077.1, ENST00000584782.5, ENST00000585249.1, ENST00000585306.5, ENST00000614384.4

Found 1257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTTCTGGCGGGTGGACGCCTGTCCCTTGTGGGAGGAGTAGGAACTaGGGGCACACCACACGGCCAGCTTGGCAAGAGCAGTGCCCGGGG +
Preference number: 1 (lower is better)
Translates to: SSGGWTPVPCGRSRN*GHTTRPAWQEQCPG
Trigger: CCCCGGGCACTGCTCTTGCCAAGCTGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCCACAAGGGACAGGCGTCCACCCGCCAGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CCA 90 bp TCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATaGTGCCCTCGAGCAGGATCACGGCGTGGACAGTGGGGAAGCCGG +
Preference number: 1 (lower is better)
Translates to: SSAAPPGTASRLSGS*CPRAGSRRGQWGSR
Trigger: CCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR GCA 90 bp TCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTaGCCTCGAGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCT +
Preference number: 1 (lower is better)
Translates to: SAAPPGTASRLSGSW*PRAGSRRGQWGSRS
Trigger: AGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CCA 90 bp GCGGCGGCAGCCAGCAGCAAGTCCAGACTCTTCCCGGACAGCATGTaGCCCAGGACTCCCAGCAGTCCCTCCGGTGACTTAGAGTGGTCT +
Preference number: 1 (lower is better)
Translates to: AAAASSKSRLFPDSM*PRTPSSPSGDLEWS
Trigger: AGACCACTCTAAGTCACCGGAGGGACTGCTGGGAGTCCTGGGCCACATGCTGTCCGGGAAGAGTCTGGACTTGCTGCTGGCTGCCGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CCA 90 bp GCCACCAGGGACTCCACTTTGGTGGAGTCGGGGCGGAAGCAGGGGTaGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATGCAGGTCTGC +
Preference number: 1 (lower is better)
Translates to: ATRDSTLVESGRKQG*SGFRILPSSGMQVC
Trigger: GCAGACCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR CCA 90 bp GGCCCAGCAGGACCAGGGTCACTTGCTGCATGTCCAGGCAGAAGATaGAGTAGAGCAGCTCCACTGCCCGCAGCGTGTGCTCCTTCCGCG +
Preference number: 1 (lower is better)
Translates to: GPAGPGSLAACPGRR*SRAAPLPAACAPSA
Trigger: CGCGGAAGGAGCACACGCTGCGGGCAGTGGAGCTGCTCTACTCCATCTTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCTGCTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR TCA 90 bp GCCAGGACTCGGTTCAGAGGGTCCCGCATGTTGACCGTGTGGAGCTaGGAGGCTGAGAGGGAGCTGCTCATGGATCGGTCTGTGGGGCTC +
Preference number: 1 (lower is better)
Translates to: ARTRFRGSRMLTVWS*EAERELLMDRSVGL
Trigger: GAGCCCCACAGACCGATCCATGAGCAGCTCCCTCTCAGCCTCTCAGCTCCACACGGTCAACATGCGGGACCCTCTGAACCGAGTCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CCA 90 bp AGGCAGTCCACACACTCCTCCATGAACCACTGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGAGCAGG +
Preference number: 1 (lower is better)
Translates to: RQSTHSSMNHCTNWV*GPAVRDPRMEEMSR
Trigger: CCTGCTCATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGGACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR CCA 90 bp TGCTCCAGGCAGTCCACACACTCCTCCATGAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATG +
Preference number: 1 (lower is better)
Translates to: CSRQSTHSSMNHCTN*VWGPAVRDPRMEEM
Trigger: CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGGACTGCCTGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR CCA 90 bp CAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTaGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCG +
Preference number: 1 (lower is better)
Translates to: QWAPPGGSAGCWAGC*HSLPISAGVRALGP
Trigger: CGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR TCA 90 bp TTGGCACTCCCTCCGGCACACGAAACCACACAGGAAGGCTTCCCCTaGGGACAACAGGGAGGGAGGGGCCTGAGGGCAGCATGCACTGTT +
Preference number: 1 (lower is better)
Translates to: LALPPAHETTQEGFP*GQQGGRGLRAACTV
Trigger: AACAGTGCATGCTGCCCTCAGGCCCCTCCCTCCCTGTTGTCCTCAGGGGAAGCCTTCCTGTGTGGTTTCGTGTGCCGGAGGGAGTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
3UTR GCA 90 bp GCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGCTTCCCTTGGAGGCGCCTGGGGCTG +
Preference number: 1 (lower is better)
Translates to: AARGSCTMWSGCEAR*LIFPHCFPWRRLGL
Trigger: CAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR GCA 90 bp CCCTCGAGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTaGATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTA +
Preference number: 1 (lower is better)
Translates to: PSSRITAWTVGKPVL*ICSACTDSIVGMLL
Trigger: TAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR GCA 90 bp GGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATGCAGGTCTaGATCCAGGTCTCGAAGAAGGGCACCTCAGCTCCTGTGCGCGAC +
Preference number: 1 (lower is better)
Translates to: GWSGFRILPSSGMQV*IQVSKKGTSAPVRD
Trigger: GTCGCGCACAGGAGCTGAGGTGCCCTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 90 bp TGGTGGAGTCGGGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTaGCCTCCTCAGGCATGCAGGTCTGCATCCAGGTCTCGAAGAAGG +
Preference number: 1 (lower is better)
Translates to: WWSRGGSRGGQGSGS*PPQACRSASRSRRR
Trigger: CCTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCCCGACTCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR CCA 90 bp GTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACA +
Preference number: 1 (lower is better)
Translates to: VSPVRFMVPSSRITA*TVGKPVLCICSACT
Trigger: TGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CCA 90 bp ATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGTaGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACC +
Preference number: 1 (lower is better)
Translates to: ICSDFSRSSSPSIRT*ATSQATAHTARLHT
Trigger: GGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR TCA 90 bp AGCATCGTGGGGATGCTCCTAATGAGGGTGCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTGCTGAGATTGGCCAGGATCTCTCCA +
Preference number: 1 (lower is better)
Translates to: SIVGMLLMRVPHCSA*LRSCGLLRLARISP
Trigger: TGGAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGCATCCCCACGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR TCA 90 bp GCAGGAACAGGTTGGCCAGGACTCGGTTCAGAGGGTCCCGCATGTTaGCCGTGTGGAGCTGAGAGGCTGAGAGGGAGCTGCTCATGGATC +
Preference number: 1 (lower is better)
Translates to: AGTGWPGLGSEGPAC*PCGAERLRGSCSWI
Trigger: GATCCATGAGCAGCTCCCTCTCAGCCTCTCAGCTCCACACGGTCAACATGCGGGACCCTCTGAACCGAGTCCTGGCCAACCTGTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 90 bp ACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATaGACAGACAGCATCGTGGGGATGCTCCTAATGAGGGTGCCACAC +
Preference number: 1 (lower is better)
Translates to: TAWTVGKPVLCICSA*TDSIVGMLLMRVPH
Trigger: GTGTGGCACCCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CCA 90 bp GAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGG +
Preference number: 1 (lower is better)
Translates to: ETGRHPGGQESGAGN*KPLEALAPCGADVR
Trigger: CCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CCA 90 bp CTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCA +
Preference number: 1 (lower is better)
Translates to: LSGSWCPRAGSRRGQ*GSRSCASAPHAQTA
Trigger: TGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCACCATGAACCTGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR TCA 90 bp GCTGAGGTCCGTGATGGCCAGAACCACCTTGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGACACGGTGGTGAAGGGCATGAACTG +
Preference number: 1 (lower is better)
Translates to: AEVRDGQNHLGAGHG*HLHQFRHGGEGHEL
Trigger: CAGTTCATGCCCTTCACCACCGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCATCACGGACCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR TCA 90 bp TCGGTTCAGAGGGTCCCGCATGTTGACCGTGTGGAGCTGAGAGGCTaGGAGGGAGCTGCTCATGGATCGGTCTGTGGGGCTCGAAAGGAT +
Preference number: 1 (lower is better)
Translates to: SVQRVPHVDRVELRG*EGAAHGSVCGARKD
Trigger: ATCCTTTCGAGCCCCACAGACCGATCCATGAGCAGCTCCCTCTCAGCCTCTCAGCTCCACACGGTCAACATGCGGGACCCTCTGAACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 90 bp AGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGG +
Preference number: 1 (lower is better)
Translates to: SRITAWTVGKPVLCI*SACTDSIVGMLLMR
Trigger: CCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR GCA 90 bp ATATGCTGCATGCGCTTCACCATCGTCAGCTGCTCCACCAGGGACTaGGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACG +
Preference number: 1 (lower is better)
Translates to: ICCMRFTIVSCSTRD*VSPVRFMVPSSRIT
Trigger: CGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAAGCGCATGCAGCATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 90 bp GTGTCCACCCCGGTGGAGGGAAACTTGATCTGCGTGGCTGTCTGCTaGAGCACGTCGGCACACATGCGCTCCAGGATCGAGTTCATGATC +
Preference number: 1 (lower is better)
Translates to: VSTPVEGNLICVAVC*STSAHMRSRIEFMI
Trigger: GATCATGAACTCGATCCTGGAGCGCATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTCCACCGGGGTGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR TCA 90 bp CCTCTAGTTTGGCGATGTGCAGCAGGGCCCGGTTCTTGGTGCTGCTaGGGGTTTTCTCCAGGCGCTGAAGGCACATGGCAAGCTGCTTCT +
Preference number: 1 (lower is better)
Translates to: PLVWRCAAGPGSWCC*GFSPGAEGTWQAAS
Trigger: AGAAGCAGCTTGCCATGTGCCTTCAGCGCCTGGAGAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCT +
Preference number: 1 (lower is better)
Translates to: RSGVRSGELEAARGS*TMWSGCEARCLIFP
Trigger: AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR GCA 90 bp TGCTCGATGGCAGTCCAAGAAGAGGCCTCCTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTGGTGCTGCTGAGGGTTTTCTCCAGG +
Preference number: 1 (lower is better)
Translates to: CSMAVQEEASSSLAM*SRARFLVLLRVFSR
Trigger: CCTGGAGAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTCTTCTTGGACTGCCATCGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CCA 90 bp GTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTC +
Preference number: 1 (lower is better)
Translates to: VRSGELEAARGSCTM*SGCEARCLIFPHCF
Trigger: GAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CCA 90 bp TTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTaGATGTTGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCT +
Preference number: 1 (lower is better)
Translates to: FVTVGSARRISWMLG*MLAFSPDFCWGACS
Trigger: AGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR GCA 90 bp ATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCTaGTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGG +
Preference number: 1 (lower is better)
Translates to: ISWMLGWMLAFSPDF*WGACSRSALRLAIR
Trigger: CCTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CCA 90 bp AGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCTGCTaGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTG +
Preference number: 1 (lower is better)
Translates to: SWMLGWMLAFSPDFC*GACSRSALRLAIRL
Trigger: CAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CCA 90 bp GTCTTGAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCTGCTGG +
Preference number: 1 (lower is better)
Translates to: VLRMFVTVGSARRIS*MLGWMLAFSPDFCW
Trigger: CCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CCA 90 bp CACCACCCTCTCATTGTAGAACTGCAGGGTGTTCTCACTAAACAGTaGCCCTGCCAGCTGGCGGATCATCTGCAGCGACTTCTCACGCTC +
Preference number: 1 (lower is better)
Translates to: HHPLIVELQGVLTKQ*PCQLADHLQRLLTL
Trigger: GAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAACACCCTGCAGTTCTACAATGAGAGGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR GCA 90 bp GATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCTGCTGGGGTaGGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTGTTGAC +
Preference number: 1 (lower is better)
Translates to: DVGLDVGILSRFLLG*VLSVRFALSHKVVD
Trigger: GTCAACAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR GCA 90 bp CCTCTCATTGTAGAACTGCAGGGTGTTCTCACTAAACAGTGGCCCTaGCAGCTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAG +
Preference number: 1 (lower is better)
Translates to: PLIVELQGVLTKQWP*QLADHLQRLLTLIQ
Trigger: CTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAACACCCTGCAGTTCTACAATGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR CCA 90 bp AGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGC +
Preference number: 1 (lower is better)
Translates to: SRWRGNFERRNRETS*RSGVRSGELEAARG
Trigger: GCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CCA 90 bp TGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCAGCAGATaGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGG +
Preference number: 1 (lower is better)
Translates to: WACGPGCSLSSGASR*RGNFERRNRETSWR
Trigger: CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CCA 90 bp TTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTTaGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGCTGGTCAGCT +
Preference number: 1 (lower is better)
Translates to: LLTLASDRSPCLPHS*SRKFVQSQLQRWSA
Trigger: AGCTGACCAGCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR GCA 90 bp CGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTaGTTGCCACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTTG +
Preference number: 1 (lower is better)
Translates to: RLAIRLLTLASDRSP*LPHSWSRKFVQSQL
Trigger: CAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR-3UTR TCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 2 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR TCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 2 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CAGCCCCCACTGCGGCCATGCCAAGCCCCTCAGAGTGCAGCAATGGCTTTAGCATCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: QPPLRPCQAPQSAAMALASLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...TGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGGCATGGCCGCAGTGGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR CAA 90 bp TGGCGGCCCAGGGGCAGGCTGAGGTCCGTGATGGCCAGAACCACCTaGGGGCTGGACATGGCTGACACCTTCACCAGTTCCGACACGGTG +
Preference number: 2 (lower is better)
Translates to: WRPRGRLRSVMARTT*GLDMADTFTSSDTV
Trigger: CACCGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCATCACGGACCTCAGCCTGCCCCTGGGCCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CAGCCCCCACTGCGGCCATGCCAAGCCCCTCAGAGTGCAGCAATGGCTTTAGCACCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: QPPLRPCQAPQSAAMALAPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...TGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGGCATGGCCGCAGTGGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp GCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 2 (lower is better)
Translates to: AWTVGKPVLCICSACTDSRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp GCCACCTGGCGGCCCAGGGGCAGGCTGAGGTCCGTGATGGCCAGAACCACCTTGGTTGGCTGTAGAGAGTaGGGGGAGAGTGACAGGAGG +
Preference number: 2 (lower is better)
Translates to: ATWRPRGRLRSVMARTTLVGCRE*GESDRR
Trigger: CCTCCTGTCACTCTCCCCCCACTCTCTACAGCCAAC...CAAGGTGGTTCTGGCCATCACGGACCTCAGCCTGCCCCTGGGCCGCCAGGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491466.5
3UTR-3UTR CCA 90 bp TGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGGGGACTCCACTTTGGTaGAGTCGGGGCGGAAGCAGG +
Preference number: 2 (lower is better)
Translates to: CTNWVWGPAVRDPRMEEMGTPLW*SRGGSR
Trigger: CCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTCCC...CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR TCA 90 bp AGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTG +
Preference number: 2 (lower is better)
Translates to: SRSCASAPHAQTASWGCSPHCSA*LRSCGL
Trigger: CAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGG...GGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR CCA 90 bp CGGCCATGCCAAGCCCCTCAGAGTGCAGCAATGGCTTTAGCAGCCACCTGGCGGCCAGGGACTCCACTTTaGTGGAGTCGGGGCGGAAGC +
Preference number: 2 (lower is better)
Translates to: RPCQAPQSAAMALAATWRPGTPL*WSRGGS
Trigger: GCTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGG...CCGCCAGGTGGCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGGCATGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CAA 90 bp GTGCCCTCGAGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTC +
Preference number: 2 (lower is better)
Translates to: VPSSRITAWTVGKPV*CICSACTDSIVGML
Trigger: GAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR TCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCACATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 2 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR TCA 90 bp TGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGA +
Preference number: 2 (lower is better)
Translates to: CSTRDCVSPVRFMVPSSRGAGHG*HLHQFR
Trigger: TCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCC...CCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR TCA 90 bp CCCTCAGAGTGCAGCAATGGCTTTAGCAGCCACCTGGCGGCCCAGGGGCAGGCTGGTTCTTGGTGCTGCTaGGGGTTTTCTCCAGGCGCT +
Preference number: 2 (lower is better)
Translates to: PSECSNGFSSHLAAQGQAGSWCC*GFSPGA
Trigger: AGCGCCTGGAGAAAACCCTCAGCAGCACCAAGAACC...AGCCTGCCCCTGGGCCGCCAGGTGGCTGCTAAAGCCATTGCTGCACTCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR TCA 90 bp GAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTG +
Preference number: 2 (lower is better)
Translates to: EAGLVHLLRMHRQHRGDAPHCSA*LRSCGL
Trigger: CAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGG...AGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR TCA 90 bp ACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGAGGGAGGGAGGGGCCTaGGGGCAGCATGCACTGTTT +
Preference number: 2 (lower is better)
Translates to: TRDCVSPVRFMVPSSRITREGGA*GQHALF
Trigger: AAACAGTGCATGCTGCCCTCAGGCCCCTCCCTCCCT...CGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
3UTR-3UTR GCA 90 bp TGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGTCCTCCATGAACCACTaGACGAACTGGGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: CTNWVWGPAVRDPRMEEMSSMNH*TNWVWG
Trigger: CCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGA...CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGGCGGCGGCAGCCAGCCTGCAGAGGCTGCCGTaGAGCGCAGCAGCCAGTGGA +
Preference number: 2 (lower is better)
Translates to: MNFRAKDFSFPVAAAAASLQRLP*SAAASG
Trigger: TCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAG...GCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR GCA 90 bp GGCCCTGCCAGCTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCTTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTC +
Preference number: 2 (lower is better)
Translates to: GPASWRIICSDFSRSSSPFTIVS*STRDCV
Trigger: GACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA...GGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCTCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: APCGADVRHDASSFLTASSLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTSLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp AGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCAAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTC +
Preference number: 2 (lower is better)
Translates to: SRITAWTVGKPVLCICSASRITA*TVGKPV
Trigger: GACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT...TGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CAA 90 bp ACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTaGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCC +
Preference number: 2 (lower is better)
Translates to: TVGSARRISWMLGWM*AFSPDFCWGACSRS
Trigger: GGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR-3UTR TCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: APCGADVRHDASSFLTASGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR TCA 90 bp CTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATGGAGCTGCGGGTTGCTaGGATTGGCCAGGATCTCTC +
Preference number: 2 (lower is better)
Translates to: LHQGLRLACQVHGALEQDGAAGC*DWPGSL
Trigger: GAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCC...ATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 2 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGTCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: FASRKFLRGKTTPGLGRASLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACTGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGAC +
Preference number: 2 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHCTNWV*GPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp GTGGAGGGAAACTTGATCTGCGTGGCTGTCTGCTGCAGCACGTCGGCACACATGTGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGAC +
Preference number: 2 (lower is better)
Translates to: VEGNLICVAVCCSTSAHMCTNWV*GPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA...CATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp CCAGAACCACCTTGGGGCTGGACATGGCTGACACCTTCACCAGTTCCGACACGGAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTG +
Preference number: 2 (lower is better)
Translates to: PEPPWGWTWLTPSPVPTRNHCTN*VWGPAV
Trigger: CACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTT...CCGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp TGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGGTTCTCACTAAACAGTaGCCCTGCCAGCTGGCGGAT +
Preference number: 2 (lower is better)
Translates to: CTNWVWGPAVRDPRMEEMVLTKQ*PCQLAD
Trigger: ATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAAC...CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CAA 90 bp TTGGTGGAGTCGGGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTaGCCCTCCTCAGGCATGCAGGTCTGCATCCAGGTCTCGAAGAAG +
Preference number: 2 (lower is better)
Translates to: LVESGRKQGWSGFRI*PSSGMQVCIQVSKK
Trigger: CTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCCCGACTCCACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR-3UTR TCA 90 bp GCTCCTAATGAGGGTGCCACACTGCTCGGCCTGACTCCGGAGCTGCGGGTTGCTCATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 2 (lower is better)
Translates to: APNEGATLLGLTPELRVAHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...AGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR TCA 90 bp TCACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGGGAGCTGCGGGTTGCTaGGATTGGCCAGGATCTCTC +
Preference number: 2 (lower is better)
Translates to: SPSSAAPPGTASRLSGSWGAAGC*DWPGSL
Trigger: GAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCC...CCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR TCA 90 bp AGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCAAGGAGCACCTGGCCCTaGACTCCTCGATTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: SRITAWTVGKPVLCICSARSTWP*TPRFWH
Trigger: GTGCCAAAATCGAGGAGTTCAGGGCCAGGTGCTCCT...TGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
3UTR-3UTR GCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 2 (lower is better)
Translates to: HRGDHWACGPGCSLSSGALIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 2 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: LEAARGSCTMWSGCEARCACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp GCATGCGCTTCACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCATGCATCTGCTCCGCATaGACAGACAGCATCGTGGGG +
Preference number: 2 (lower is better)
Translates to: ACASPSSAAPPGTASRLSCICSA*TDSIVG
Trigger: CCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCA...TGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAAGCGCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR GCA 90 bp TCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCCCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGC +
Preference number: 2 (lower is better)
Translates to: STRDCVSPVRFMVPSSRIPVLCI*SACTDS
Trigger: GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGG...GATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR GCA 90 bp CTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATTTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTC +
Preference number: 2 (lower is better)
Translates to: LHQGLRLACQVHGALEQDFTIVS*STRDCV
Trigger: GACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA...ATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR CCA 90 bp GCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTCCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: AIRLLTLASDRSPCLPHSPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...AGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp CATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGGGTGCCAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTG +
Preference number: 2 (lower is better)
Translates to: HLLRMHRQHRGDAPNEGANHCTN*VWGPAV
Trigger: CACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTT...GGCACCCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp TCCCTTGTGGGAGGAGTAGGAACTGAGGGCACACCACACGGCCAGCTTGGCAAGAGGCCTCCTCTAGTTTaGCGATGTGCAGCAGGGCCC +
Preference number: 2 (lower is better)
Translates to: SLVGGVGTEGTPHGQLGKRPPLV*RCAAGP
Trigger: GGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCT...CTTGCCAAGCTGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCCACAAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR TCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGCATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 2 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 2 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTTCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: RSGELEAARGSCTMWSGCSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp GAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: EDVCDSGLRPEDQLDVGLNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...CAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCTGGCCAGAACCACCTTaGGGCTGGACATGGCTGACA +
Preference number: 2 (lower is better)
Translates to: LEAARGSCTMWSGCEARCWPEPP*GWTWLT
Trigger: TGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCA...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp TCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGGGCGCTGAAGGCACATaGCAAGCTGCTTCTCCCCAG +
Preference number: 2 (lower is better)
Translates to: SRFLLGCVLSVRFALSHKGAEGT*QAASPQ
Trigger: CTGGGGAGAAGCAGCTTGCCATGTGCCTTCAGCGCC...CTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp CATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGGGTGCCTCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCA +
Preference number: 2 (lower is better)
Translates to: HLLRMHRQHRGDAPNEGASRRGQ*GSRSCA
Trigger: TGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA...GGCACCCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CAA 90 bp AGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTaGGGCTGGATGTTGGCATTCTCTCCCGATTTCTGCTGGGGTGCG +
Preference number: 2 (lower is better)
Translates to: RMFVTVGSARRISWM*GWMLAFSPDFCWGA
Trigger: CGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR-3UTR GCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 2 (lower is better)
Translates to: RSGELEAARGSCTMWSGCLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp TCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 2 (lower is better)
Translates to: SRFLLGCVLSVRFALSHKAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...CTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR GCA 90 bp CAGGTCTCGAAGAAGGGCACCTCAGCTCCTGTGCGCGACTCGGACAGAATCACCTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTG +
Preference number: 2 (lower is better)
Translates to: QVSKKGTSAPVRDSDRITSSLAM*SRARFL
Trigger: CAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGA...GGTGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGCCCTTCTTCGAGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR GCA 90 bp ATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGGCGGCGGCAGCCAGCAGTGGGGTGGGGATATaGTGCATGCGCTTCACCATC +
Preference number: 2 (lower is better)
Translates to: MNFRAKDFSFPVAAAAASSGVGI*CMRFTI
Trigger: GATGGTGAAGCGCATGCAGCATATCCCCACCCCACT...GCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCTCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: GNFERRNRETSWRSGVRSSLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGCCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: NFERRNRETSWRSGVRSGPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTC +
Preference number: 2 (lower is better)
Translates to: LVHLLRMHRQHRGDAPNESRITA*TVGKPV
Trigger: GACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT...CTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR CCA 90 bp TTCACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGCGCCTGTCAGGTTCATaGTGCCCTCGAGCAGGATCA +
Preference number: 2 (lower is better)
Translates to: FTIVSCSTRDCVSPVRFMRLSGS*CPRAGS
Trigger: TGATCCTGCTCGAGGGCACCATGAACCTGACAGGCG...CATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR CCA 90 bp GGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATGCAGGGATCAGCTGGATGTTaGGCTGGATGTTGGCATTCT +
Preference number: 2 (lower is better)
Translates to: GRKQGWSGFRILPSSGMQGSAGC*AGCWHS
Trigger: AGAATGCCAACATCCAGCCCAACATCCAGCTGATCC...CTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp TCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGGGCAGTCCAAGAAGCTaGCAGAGGGAAGGAAGTACA +
Preference number: 2 (lower is better)
Translates to: SRRGQWGSRSCASAPHAQGSPRS*QREGST
Trigger: TGTACTTCCTTCCCTCTGCCAGCTTCTTGGACTGCC...CTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
3UTR-3UTR TCA 90 bp GAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTGGGGACACAGCCAGCTaGCTTCAGAAGGTATGGCAT +
Preference number: 2 (lower is better)
Translates to: EAGLVHLLRMHRQHRGDAGDTAS*LQKVWH
Trigger: ATGCCATACCTTCTGAAGTCAGCTGGCTGTGTCCCC...AGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
3UTR-3UTR GCA 90 bp CAGGTCTCGAAGAAGGGCACCTCAGCTCCTGTGCGCGACTCGGACAGAATCACCGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: QVSKKGTSAPVRDSDRITGCEAR*LIFPHC
Trigger: GCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCC...GGTGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGCCCTTCTTCGAGACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR GCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGCTCCCGCAGCCGCTCTaGAGAGGCTGCCGTGCAGCG +
Preference number: 2 (lower is better)
Translates to: DGEEILKEETGRHPGGQELPQPL*RGCRAA
Trigger: CGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAG...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR GCA 90 bp TCCTCCGTACCCTCGGGAGACTCAATGAGCCCCACGAAGCAAGCTTTCCAGATCGGGGTGGGGATATGCTaGATGCGCTTCACCATCGTC +
Preference number: 2 (lower is better)
Translates to: SSVPSGDSMSPTKQAFQIGVGIC*MRFTIV
Trigger: GACGATGGTGAAGCGCATGCAGCATATCCCCACCCC...GATCTGGAAAGCTTGCTTCGTGGGGCTCATTGAGTCTCCCGAGGGTACGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 2 (lower is better)
Translates to: KKKPGDILEVRSQERGTGGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: APCGADVRHDASSFLTASNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTCTTCTCCCCAGCGGCTaGAGTGCCGGCCTCCAGCCC +
Preference number: 2 (lower is better)
Translates to: QVPADGEEILKEETGRHPLLPSG*SAGLQP
Trigger: GGGCTGGAGGCCGGCACTCCAGCCGCTGGGGAGAAG...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp CATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCAGAGAGAATGCTCGATaGCAGTCCAAGAAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: HRQLLHQGLRLACQVHGARENAR*QSKKRP
Trigger: AGGCCTCTTCTTGGACTGCCATCGAGCATTCTCTCT...GGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR TCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 2 (lower is better)
Translates to: PADGEEILKEETGRHPGGGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 2 (lower is better)
Translates to: APCGADVRHDASSFLTASLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 2 (lower is better)
Translates to: ALAPCGADVRHDASSFLTAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTTGGAGCAGGAAGTTTTCCTCCATGAACCACTaGACGAACTGGGTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TLASDRSPCLPHSWSRKFSSMNH*TNWVWG
Trigger: CCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGA...AAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp ACAGTCACAGTTGCAGCGCTGGTCAGCTTTGTCCAACAAGGGGGTGAGCTTCAGTCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: TVTVAALVSFVQQGGELQSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...CTGAAGCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGACTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 2 (lower is better)
Translates to: SLSSGASRWRGNFERRNRRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp GTGGGAGGAGTAGGAACTGAGGGCACACCACACGGCCAGCTTGGCAAGAGCAGTTCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTG +
Preference number: 2 (lower is better)
Translates to: VGGVGTEGTPHGQLGKSSSGDLE*SASIVL
Trigger: CAAGACGATGGATGCAGACCACTCTAAGTCACCGGA...ACTGCTCTTGCCAAGCTGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp ATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGGCGGCGGCAGCCAGCTCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTG +
Preference number: 2 (lower is better)
Translates to: MNFRAKDFSFPVAAAAASSGDLE*SASIVL
Trigger: CAAGACGATGGATGCAGACCACTCTAAGTCACCGGA...GCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CAA 90 bp GTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTaGGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGCTGGTCAGC +
Preference number: 2 (lower is better)
Translates to: VVDAGLRQKPLLATF*EQEVCTVTVAALVS
Trigger: GCTGACCAGCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR-3UTR TCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 2 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR TCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCACACACTCCTCCATaGACCACTGCACGAACTGGG +
Preference number: 2 (lower is better)
Translates to: FERRNRETSWRSGVRSGEPHTPP*TTARTG
Trigger: CCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGG...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR TCA 90 bp CACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTGTTTTCTCCAGGCGCTaGAGGCACATGGCAAGCTGC +
Preference number: 2 (lower is better)
Translates to: HKPSHSTHRQTAYLPFDVVFSRR*RHMASC
Trigger: GCAGCTTGCCATGTGCCTTCAGCGCCTGGAGAAAAC...AACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CAA 90 bp ATTTTCTGGATGGACTCGAAGGCCAGGACCCCATTCTCCCAGGCATaGAGGATTTCCAAGATGGCGGCTGAGATGCTGAGACAGGCCTCA +
Preference number: 2 (lower is better)
Translates to: IFWMDSKARTPFSQA*RISKMAAEMLRQAS
Trigger: TGAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGGGGTCCTGGCCTTCGAGTCCATCCAGAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR-3UTR TCA 90 bp CAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTATCAGTGCCACACACTCCTCCATaGACCACTGCACGAACTGGG +
Preference number: 2 (lower is better)
Translates to: QATAHTARLHTFPLMLSVPHTPP*TTARTG
Trigger: CCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGG...CACTGATAACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR GCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAGCEAR*LIFPHC
Trigger: GCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCC...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGAGTTTCAAGAGAGAATaGTCGATGGCAGTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: TRDCVSPVRFMVPSSRITSFKRE*SMAVQE
Trigger: TTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACT...CGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR GCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGCCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGC +
Preference number: 2 (lower is better)
Translates to: NFERRNRETSWRSGVRSGPVLCI*SACTDS
Trigger: GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGG...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CAA 90 bp CAGGCTGCTCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGA +
Preference number: 2 (lower is better)
Translates to: QAAHSPQVPADGEEI*KEETGRHPGGQESG
Trigger: TCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGAGCAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGA +
Preference number: 2 (lower is better)
Translates to: GEEILKEETGRHPGGQESGAGHG*HLHQFR
Trigger: TCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCC...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR TCA 90 bp TGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCAAGTCCTTGTCTCCATaGGAGTACTTCTTCAACTTC +
Preference number: 2 (lower is better)
Translates to: WAPPGGSAGCWAGCWHSLKSLSP*EYFFNF
Trigger: GAAGTTGAAGAAGTACTCTCATGGAGACAAGGACTT...GAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCACCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: THTHTHTHIHTLHLESSSPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 2 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 2 (lower is better)
Translates to: THFASRKFLRGKTTPGLGGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHFASRKFLRRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CAA 90 bp TTCACCAAAACCTGTGGAATCTTGAGGAAAGTGAAAGCTGTCCACTaGAGCTCCTCCGTACCCTCGGGAGACTCAATGAGCCCCACGAAG +
Preference number: 2 (lower is better)
Translates to: FTKTCGILRKVKAVH*SSSVPSGDSMSPTK
Trigger: CTTCGTGGGGCTCATTGAGTCTCCCGAGGGTACGGAGGAGCTCAAGTGGACAGCTTTCACTTTCCTCAAGATTCCACAGGTTTTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR TCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGCATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 2 (lower is better)
Translates to: ASRWRGNFERRNRETSWRHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp AGCTTCAGCAGGAACTCAAAAGCACAGTTGACATCCTCAGTGAAGTCCTTGTCTAGGCACATGGCAAGCTaGTTCTCCCCAGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: SFSRNSKAQLTSSVKSLSRHMAS*FSPAAG
Trigger: TCCAGCCGCTGGGGAGAAGCAGCTTGCCATGTGCCT...AGACAAGGACTTCACTGAGGATGTCAACTGTGCTTTTGAGTTCCTGCTGAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 2 (lower is better)
Translates to: QVPADGEEILKEETGRHPGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATTGGCCAGAACCACCTTaGGGCTGGACATGGCTGACA +
Preference number: 2 (lower is better)
Translates to: PQVPADGEEILKEETGRHWPEPP*GWTWLT
Trigger: TGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCA...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR CAA 90 bp TTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTaGCCACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTTGCAG +
Preference number: 2 (lower is better)
Translates to: LAIRLLTLASDRSPC*PHSWSRKFVQSQLQ
Trigger: CTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR-3UTR GCA 90 bp GCGCTCCAGGATCGAGTTCATGATCACCACCCTCTCATTGTAGAACTGCAGGGTTCATGCCACTTCATCTaGACTAGCTTCATCTCCGAG +
Preference number: 2 (lower is better)
Translates to: ALQDRVHDHHPLIVELQGSCHFI*TSFISE
Trigger: CTCGGAGATGAAGCTAGTGCAGATGAAGTGGCATGA...ACCCTGCAGTTCTACAATGAGAGGGTGGTGATCATGAACTCGATCCTGGAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR-3UTR GCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: GEEILKEETGRHPGGQESGCEAR*LIFPHC
Trigger: GCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCC...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHFASRKFLRACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: THTHTHTHIHTLHLESSSACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCA +
Preference number: 2 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLVKGMN*RTLPRP
Trigger: TGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCAC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHFASRKFLRAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACCTGCCACGGCCACCCTaGTCCAGGCAGTCCACACAC +
Preference number: 2 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHLPRPP*SRQSTH
Trigger: GTGTGTGGACTGCCTGGAGCAGGGTGGCCGTGGCAG...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491466.5
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHFASRKFLRGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGATCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCATCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: THTHTHTHIHTLHLESSSSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: THTHTHTHIHTLHLESSSNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGAGAACCACCTTGGGGCTaGACATGGCTGACACCTTCA +
Preference number: 2 (lower is better)
Translates to: HTHTHIHTLHLESSSEVREPPWG*TWLTPS
Trigger: TGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTC...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGC +
Preference number: 2 (lower is better)
Translates to: THTHTHTHTHFASRKFLRGCEAR*LIFPHC
Trigger: GCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCC...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR GCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
3UTR-3UTR GCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATAGTTTCAAGAGAGAATaGTCGATGGCAGTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: PQVPADGEEILKEETGRHSFKRE*SMAVQE
Trigger: TTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACT...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACTCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 2 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
3UTR GCA 72 bp TGGAGTGCCGGCCTCCAGCCCCTCCCGCAGCCGCTCTaGAGAGGCTGCCGTGCAGCGCAGCAGCCAGTGGAG +
Preference number: 3 (lower is better)
Translates to: WSAGLQPLPQPL*RGCRAAQQPVE
Trigger: CTCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAGGGGCTGGAGGCCGGCACTCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR TCA 72 bp GGGATGCTCCTAATGAGGGTGCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTGCTGAGATTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: GMLLMRVPHCSA*LRSCGLLRLAR
Trigger: CCTGGCCAATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR GCA 72 bp TGCTCCAGGCAGTCCACACACTCCTCCATGAACCACTaGACGAACTGGGTGTGGGGGCCAGCGGTGCGAGAC +
Preference number: 3 (lower is better)
Translates to: CSRQSTHSSMNH*TNWVWGPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGGACTGCCTGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR GCA 72 bp TTCACCAGTTCCGACACGGTGGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCACCCTGCTCCAGGCAG +
Preference number: 3 (lower is better)
Translates to: FTSSDTVVKGMN*RTLPRPPCSRQ
Trigger: CTGCCTGGAGCAGGGTGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCACCACCGTGTCGGAACTGGTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR CCA 72 bp ACACACTCCTCCATGAACCACTGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAG +
Preference number: 3 (lower is better)
Translates to: THSSMNHCTNWV*GPAVRDPRMEE
Trigger: CTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR CCA 72 bp CAGTCCACACACTCCTCCATGAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATG +
Preference number: 3 (lower is better)
Translates to: QSTHSSMNHCTN*VWGPAVRDPRM
Trigger: CATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGGACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR CCA 72 bp GACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGTaGGCCACAAGCCAAGCCACAGCACACACCGCCAGA +
Preference number: 3 (lower is better)
Translates to: DFSRSSSPSIRT*ATSQATAHTAR
Trigger: TCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR CCA 72 bp CGCCGCCCATGTGCAGCAGGGTGTCAAAGATGTGGATaGAGCGGCTGTCCACCCAGCCCTTCTCCAGCACCT +
Preference number: 3 (lower is better)
Translates to: RRPCAAGCQRCG*SGCPPSPSPAP
Trigger: AGGTGCTGGAGAAGGGCTGGGTGGACAGCCGCTCCATCCACATCTTTGACACCCTGCTGCACATGGGCGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CAA 90 bp AGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCACTCCGGAGCTGCGGGTaGCTGAGATTGGCCAGGATC +
Preference number: 3 (lower is better)
Translates to: SRITAWTVGKPVLCICSALRSCG*LRLARI
Trigger: GATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAG...TGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR CAA 90 bp TCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGC +
Preference number: 3 (lower is better)
Translates to: SAAPPGTASRLSGSWCPRVGKPV*CICSAC
Trigger: GCATGCGGAGCAGATGCACAAGACCGGCTTCCCCAC...TCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR CAA 90 bp GATGCTCCTAATGAGGGTGCCACACTGCTCGGCCTGACTCCGGAGCTGCGGGTTATGGCCAGAACCACCTaGGGGCTGGACATGGCTGAC +
Preference number: 3 (lower is better)
Translates to: DAPNEGATLLGLTPELRVMARTT*GLDMAD
Trigger: GTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCAT...AACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 72 bp GTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGTGAGGCACGATGCCTC +
Preference number: 3 (lower is better)
Translates to: VRSGELEAARGS*TMWSGCEARCL
Trigger: GAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR GCA 72 bp ACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGCATCGTGGGGATGCTC +
Preference number: 3 (lower is better)
Translates to: TAWTVGKPVLCI*SACTDSIVGML
Trigger: GAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR GCA 72 bp AGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTaGATCTGCTCCGCATGCACAGACAGCATCGTGGGG +
Preference number: 3 (lower is better)
Translates to: RITAWTVGKPVL*ICSACTDSIVG
Trigger: CCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR GCA 72 bp CCGGTGGAGGGAAACTTGATCTGCGTGGCTGTCTGCTaGAGCACGTCGGCACACATGCGCTCCAGGATCGAG +
Preference number: 3 (lower is better)
Translates to: PVEGNLICVAVC*STSAHMRSRIE
Trigger: CTCGATCCTGGAGCGCATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTCCACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 72 bp ACCCCGGTGGAGGGAAACTTGATCTGCGTGGCTGTCTaGTGCAGCACGTCGGCACACATGCGCTCCAGGATC +
Preference number: 3 (lower is better)
Translates to: TPVEGNLICVAV*CSTSAHMRSRI
Trigger: GATCCTGGAGCGCATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTCCACCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CCA 72 bp TCATGGTGCCCTCGAGCAGGATCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCA +
Preference number: 3 (lower is better)
Translates to: SWCPRAGSRRGQ*GSRSCASAPHA
Trigger: TGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCACCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CCA 72 bp GTCAGGTTCATGGTGCCCTCGAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCC +
Preference number: 3 (lower is better)
Translates to: VRFMVPSSRITA*TVGKPVLCICS
Trigger: GGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCACCATGAACCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CCA 72 bp GACTCCACTTTGGTGGAGTCGGGGCGGAAGCAGGGGTaGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATG +
Preference number: 3 (lower is better)
Translates to: DSTLVESGRKQG*SGFRILPSSGM
Trigger: CATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR-3UTR CAA 90 bp TTCACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGAGGCCTCCTCTAGTTaGGCGATGTGCAGCAGGGCC +
Preference number: 3 (lower is better)
Translates to: FTIVSCSTRDCVSPVRFMEASSS*AMCSRA
Trigger: GGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTC...CATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CAA 90 bp CATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGGGTGCCGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGC +
Preference number: 3 (lower is better)
Translates to: HLLRMHRQHRGDAPNEGAVGKPV*CICSAC
Trigger: GCATGCGGAGCAGATGCACAAGACCGGCTTCCCCAC...GGCACCCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR CAA 90 bp CGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGTGGTTCATCTCCGAGGAGTaGTTGAGCAGGGCCACCAGG +
Preference number: 3 (lower is better)
Translates to: RIICSDFSRSSSPSIRTWFISEE*LSRATR
Trigger: CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAA...CCACGTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR-3UTR CAA 90 bp TGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGCCATTCTCCCAGGCATaGAGGATTTCCAAGATGGCG +
Preference number: 3 (lower is better)
Translates to: CTNWVWGPAVRDPRMEEMPFSQA*RISKMA
Trigger: CGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGG...CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CAA 90 bp CTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCTGAACTCCTCGATTTaGGCACTCCCTCCGGCACAC +
Preference number: 3 (lower is better)
Translates to: LHQGLRLACQVHGALEQDLNSSI*ALPPAH
Trigger: GTGTGCCGGAGGGAGTGCCAAAATCGAGGAGTTCAG...ATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
3UTR TCA 72 bp CGTGATGGCCAGAACCACCTTGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGACACGGTGGTGAAGGG +
Preference number: 3 (lower is better)
Translates to: RDGQNHLGAGHG*HLHQFRHGGEG
Trigger: CCCTTCACCACCGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCATCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR GCA 72 bp GTGGGGATATGCTGCATGCGCTTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTC +
Preference number: 3 (lower is better)
Translates to: VGICCMRFTIVS*STRDCVSPVRF
Trigger: GAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAAGCGCATGCAGCATATCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CCA 72 bp AGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCG +
Preference number: 3 (lower is better)
Translates to: RHPGGQESGAGN*KPLEALAPCGA
Trigger: CGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CCA 72 bp CCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTaGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCT +
Preference number: 3 (lower is better)
Translates to: PPGGSAGCWAGC*HSLPISAGVRA
Trigger: AGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CCA 72 bp GTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTaGATGTTGGCATTCTCTCCCGATTTCTGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: VGSARRISWMLG*MLAFSPDFCWG
Trigger: ACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR-3UTR CAA 90 bp TCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGATGCGGGTTGCTGAGATaGGCCAGGATCTCTCCAAGT +
Preference number: 3 (lower is better)
Translates to: SAAPPGTASRLSGSWCPRCGLLR*ARISPS
Trigger: ACTTGGAGAGATCCTGGCCAATCTCAGCAACCCGCA...TCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR-3UTR CAA 90 bp CGGCCATGCCAAGCCCCTCAGAGTGCAGCAATGGCTTTAGCAGCCACCTGGCGGGGGCTCGAAAGGATGTaGGCATCGTCCTCATTAGAG +
Preference number: 3 (lower is better)
Translates to: RPCQAPQSAAMALAATWRGLERM*ASSSLE
Trigger: CTCTAATGAGGACGATGCCAACATCCTTTCGAGCCC...CCGCCAGGTGGCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGGCATGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 72 bp GGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGCTTCCCTTGGAGGCGC +
Preference number: 3 (lower is better)
Translates to: GSCTMWSGCEAR*LIFPHCFPWRR
Trigger: GCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR GCA 72 bp GCAGTCCAAGAAGAGGCCTCCTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTGGTGCTGCTGAGGGTT +
Preference number: 3 (lower is better)
Translates to: AVQEEASSSLAM*SRARFLVLLRV
Trigger: AACCCTCAGCAGCACCAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTCTTCTTGGACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 72 bp GGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATaGAGGTCTGCATCCAGGTCTCGAAGAAGGGCACCT +
Preference number: 3 (lower is better)
Translates to: GGQGSGSCPPQA*RSASRSRRRAP
Trigger: AGGTGCCCTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CCA 72 bp TTGGGCTGGATGTTGGCATTCTCTCCCGATTTCTGCTaGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTAGCC +
Preference number: 3 (lower is better)
Translates to: LGWMLAFSPDFC*GACSRSALRLA
Trigger: GGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR-3UTR CAA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTATGGCCAGAACCACCTaGGGGCTGGACATGGCTGAC +
Preference number: 3 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPMARTT*GLDMAD
Trigger: GTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCAT...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CAA 90 bp CGGCCATGCCAAGCCCCTCAGAGTGCAGCAATGGCTTTAGCAGCCACCTGGCGGTCTGCATCCATCGTCTaGAGGATGTTTGTGACAGTG +
Preference number: 3 (lower is better)
Translates to: RPCQAPQSAAMALAATWRSASIV*RMFVTV
Trigger: CACTGTCACAAACATCCTCAAGACGATGGATGCAGA...CCGCCAGGTGGCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGGCATGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CAA 90 bp GCGCTCCAGGATCGAGTTCATGATCACCACCCTCTCATTGTAGAACTGCAGGGTACCAGGGACTCCACTTaGGTGGAGTCGGGGCGGAAG +
Preference number: 3 (lower is better)
Translates to: ALQDRVHDHHPLIVELQGTRDST*VESGRK
Trigger: CTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGGT...ACCCTGCAGTTCTACAATGAGAGGGTGGTGATCATGAACTCGATCCTGGAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR TCA 72 bp CACACTGCTCGGCCTGACTCCGGAGCTGCGGGTTGCTaGGATTGGCCAGGATCTCTCCAAGTTTCAAGAGAG +
Preference number: 3 (lower is better)
Translates to: HTARPDSGAAGC*DWPGSLQVSRE
Trigger: CTCTCTTGAAACTTGGAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR TCA 72 bp CAGCATGTGGCCCAGGACTCCCAGCAGTCCCTCCGGTaGCTTAGAGTGGTCTGCATCCATCGTCTTGAGGAT +
Preference number: 3 (lower is better)
Translates to: QHVAQDSQQSLR*LRVVCIHRLED
Trigger: ATCCTCAAGACGATGGATGCAGACCACTCTAAGTCACCGGAGGGACTGCTGGGAGTCCTGGGCCACATGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR GCA 72 bp ACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATaGACAGACAGCATCGTGGGGATGCTCCTAATGAGG +
Preference number: 3 (lower is better)
Translates to: TVGKPVLCICSA*TDSIVGMLLMR
Trigger: CCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CCA 72 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGATGCCTCATCTTTCCT +
Preference number: 3 (lower is better)
Translates to: GELEAARGSCTM*SGCEARCLIFP
Trigger: AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR GCA 72 bp CTGGATGTTGGCATTCTCTCCCGATTTCTGCTGGGGTaGGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAG +
Preference number: 3 (lower is better)
Translates to: LDVGILSRFLLG*VLSVRFALSHK
Trigger: CTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR GCA 72 bp ATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCTaGTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTA +
Preference number: 3 (lower is better)
Translates to: MLGWMLAFSPDF*WGACSRSALRL
Trigger: TAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR GCA 72 bp GTAGAACTGCAGGGTGTTCTCACTAAACAGTGGCCCTaGCAGCTGGCGGATCATCTGCAGCGACTTCTCACG +
Preference number: 3 (lower is better)
Translates to: VELQGVLTKQWP*QLADHLQRLLT
Trigger: CGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAACACCCTGCAGTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR CCA 72 bp ATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTGGCATTCTCTCCCGAT +
Preference number: 3 (lower is better)
Translates to: MFVTVGSARRIS*MLGWMLAFSPD
Trigger: ATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR GCA 72 bp ATGTTGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTaGTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTG +
Preference number: 3 (lower is better)
Translates to: MLAFSPDFCWGA*SRSALRLAIRL
Trigger: CAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR GCA 72 bp TCCAAGATGGCGGCTGAGATGCTGAGACAGGCCTCATaGCACTTCATCTGCACTAGCTTCATCTCCGAGGAG +
Preference number: 3 (lower is better)
Translates to: SKMAAEMLRQAS*HFICTSFISEE
Trigger: CTCCTCGGAGATGAAGCTAGTGCAGATGAAGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR CCA 72 bp CTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTTaGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGC +
Preference number: 3 (lower is better)
Translates to: LASDRSPCLPHS*SRKFVQSQLQR
Trigger: GCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CCA 72 bp CCCAGGACTCCCAGCAGTCCCTCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTGAGGATGTTTGTGACA +
Preference number: 3 (lower is better)
Translates to: PRTPSSPSGDLE*SASIVLRMFVT
Trigger: TGTCACAAACATCCTCAAGACGATGGATGCAGACCACTCTAAGTCACCGGAGGGACTGCTGGGAGTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CCA 72 bp CTCATTGTAGAACTGCAGGGTGTTCTCACTAAACAGTaGCCCTGCCAGCTGGCGGATCATCTGCAGCGACTT +
Preference number: 3 (lower is better)
Translates to: LIVELQGVLTKQ*PCQLADHLQRL
Trigger: AAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAACACCCTGCAGTTCTACAATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR-3UTR CAA 90 bp CAGGTCTCGAAGAAGGGCACCTCAGCTCCTGTGCGCGACTCGGACAGAATCACCGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 3 (lower is better)
Translates to: QVSKKGTSAPVRDSDRITDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...GGTGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGCCCTTCTTCGAGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR TCA 72 bp ATTCTCCCAGGCATTGAGGATTTCCAAGATGGCGGCTaGGATGCTGAGACAGGCCTCATGCCACTTCATCTG +
Preference number: 3 (lower is better)
Translates to: ILPGIEDFQDGG*DAETGLMPLHL
Trigger: CAGATGAAGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAAATCCTCAATGCCTGGGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
3UTR CCA 72 bp AGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCC +
Preference number: 3 (lower is better)
Translates to: RGNFERRNRETS*RSGVRSGELEA
Trigger: GGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CCA 72 bp CACGAAGCAAGCTTTCCAGATCTCCAGGACAAAAAGTaGGGTGGGGATATGCTGCATGCGCTTCACCATCGT +
Preference number: 3 (lower is better)
Translates to: HEASFPDLQDKK*GGDMLHALHHR
Trigger: ACGATGGTGAAGCGCATGCAGCATATCCCCACCCCACTTTTTGTCCTGGAGATCTGGAAAGCTTGCTTCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR GCA 72 bp ATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTaGTTGCCACATTCTTGGAGCAGGAAGTTTGTACAG +
Preference number: 3 (lower is better)
Translates to: IRLLTLASDRSP*LPHSWSRKFVQ
Trigger: CTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
3UTR CCA 72 bp CCAGGATCTCTCCAAGTTTCAAGAGAGAATGCTCGATaGCAGTCCAAGAAGAGGCCTCCTCTAGTTTGGCGA +
Preference number: 3 (lower is better)
Translates to: PGSLQVSRENAR*QSKKRPPLVWR
Trigger: TCGCCAAACTAGAGGAGGCCTCTTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACTTGGAGAGATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CCA 72 bp CCAGGATCTCTCCAAGTTTCAAGAGAGAATGCTCGATaGCAGTCCAAGAAGCTGGCAGAGGGAAGGAAGTAC +
Preference number: 3 (lower is better)
Translates to: PGSLQVSRENAR*QSKKLAEGRKY
Trigger: GTACTTCCTTCCCTCTGCCAGCTTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACTTGGAGAGATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
3UTR-3UTR CAA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCACACACATACACACTTaGCATCTAGAAAGTTCCTCA +
Preference number: 3 (lower is better)
Translates to: APCGADVRHDASSFLTASTHIHT*HLESSS
Trigger: TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGT...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR GCA 72 bp AGATTGGCCAGGATCTCTCCAAGTTTCAAGAGAGAATaGTCGATGGCAGTCCAAGAAGAGGCCTCCTCTAGT +
Preference number: 3 (lower is better)
Translates to: RLARISPSFKRE*SMAVQEEASSS
Trigger: ACTAGAGGAGGCCTCTTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACTTGGAGAGATCCTGGCCAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR-3UTR CAA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 3 (lower is better)
Translates to: NFERRNRETSWRSGVRSGDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CAA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 3 (lower is better)
Translates to: THFASRKFLRGKTTPGLGDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR-3UTR CAA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 3 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGTCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGSLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGPHCSA*LRSCGL
Trigger: CAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGG...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CTGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LHELGVGASGARPQDGGDGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...ATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCATGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGAC +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPCTNWV*GPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGCCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CTNWVWGPAVRDPRMEEMPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTPHCSA*LRSCGL
Trigger: CAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCCTCCCGCAGCCGCTCTaGAGAGGCTGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSLPQPL*RGCRAA
Trigger: CGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAG...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CGGCACACGAAACCACACAGGAAGGCTTCCCCTGAGGACAACAGGGAGGGAGGGCTCCCGCAGCCGCTCTaGAGAGGCTGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RHTKPHRKASPEDNREGGLPQPL*RGCRAA
Trigger: CGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAG...CCCTCCCTCCCTGTTGTCCTCAGGGGAAGCCTTCCTGTGTGGTTTCGTGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAACTGCCCGCAGCGTGTaGTCCTTCCGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPTARSV*SFRVSF
Trigger: GAAGGAGACGCGGAAGGAGCACACGCTGCGGGCAGT...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGCTGCCACGGCCACCCTaGTCCAGGCAGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVLPRPP*SRQSTH
Trigger: GTGTGTGGACTGCCTGGAGCAGGGTGGCCGTGGCAG...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGTTCACTCTGAGCAGGTaGCAGCGGTGGCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVFTLSR*QRWRPA
Trigger: CGCTGGCCGCCACCGCTGCCACCTGCTCAGAGTGAA...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356271.7
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCTTCTCCCCAGCGGCTaGAGTGCCGGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LHQGLRLACQVHGALEQDLLPSG*SAGLQP
Trigger: GGGCTGGAGGCCGGCACTCCAGCCGCTGGGGAGAAG...ATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAGGGACTCCACTTTGGTaGAGTCGGGGCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPGTPLW*SRGGSR
Trigger: CCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTCCC...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATTGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGAC +
Preference number: 4 (lower is better)
Translates to: LHELGVGASGARPQDGGDCTNWV*GPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA...ATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGTCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVSLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSPHCSA*LRSCGL
Trigger: CAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGG...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGGAGGGTCCCGCATGTTaGCCGTGTGGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGEGPAC*PCGAER
Trigger: CCTCTCAGCTCCACACGGTCAACATGCGGGACCCTC...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCTGCCACGGCCACCCTaGTCCAGGCAGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTLPRPP*SRQSTH
Trigger: GTGTGTGGACTGCCTGGAGCAGGGTGGCCGTGGCAG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPVKGMN*RTLPRP
Trigger: TGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCAC...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCAGCGCAGCAGCCAGTaGAGGGCGCTAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGQRSSQ*RALRRA
Trigger: AGCCCTTCTTAGCGCCCTCCACTGGCTGCTGCGCTG...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTTCTCCCCAGCGGCTaGAGTGCCGGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCLLPSG*SAGLQP
Trigger: GGGCTGGAGGCCGGCACTCCAGCCGCTGGGGAGAAG...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGSRITA*TVGKPV
Trigger: GACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVSRITA*TVGKPV
Trigger: GACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAATTTCAGCTTTCCAGTaGCGGCGGCGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPISAFQ*RRRQPA
Trigger: TGCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAAT...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCCAGGGACTCCACTTTaGTGGAGTCGGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGPGTPL*WSRGGS
Trigger: GCTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGG...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAAGAGGGAGCTGCTCATaGATCGGTCTGTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPRGSCS*IGLWGS
Trigger: CGAGCCCCACAGACCGATCCATGAGCAGCTCCCTCT...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCTGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGAC +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGACTNWV*GPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCATCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEASLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMSLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCTCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCSLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMPHCSA*LRSCGL
Trigger: CAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGG...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp CTGCTCGGCCTGACTCCGGAGCTGCGGGTTGCTGAGATTGGCCAGGATCTCTCCAGGGAGGGAGGGGCCTaGGGGCAGCATGCACTGTTT +
Preference number: 4 (lower is better)
Translates to: LLGLTPELRVAEIGQDLSREGGA*GQHALF
Trigger: AAACAGTGCATGCTGCCCTCAGGCCCCTCCCTCCCT...GGAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp ACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGCTGCAGAGGCTGCCGTaGAGCGCAGCAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: TRDCVSPVRFMVPSSRITLQRLP*SAAASG
Trigger: TCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAG...CGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACCTCCCGCAGCCGCTCTaGAGAGGCTGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHLPQPL*RGCRAA
Trigger: CGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAG...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGAGGCACATGGCAAGCTaGTTCTCCCCAGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGRHMAS*FSPAAG
Trigger: TCCAGCCGCTGGGGAGAAGCAGCTTGCCATGTGCCT...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCTTCTGCTGGGGTGCGTaGTCTCGGTCCGCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAFCWGA*SRSALR
Trigger: GCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAA...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCACAGGGTTCAGGATCTTaGCCTCCTCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPQGSGS*PPQACR
Trigger: CCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTG...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGACCCCCACTGCGGCCATaGCAAGCCCCTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SAAPPGTASRLSGSWCPRPPLRP*QAPQSA
Trigger: TGCACTCTGAGGGGCTTGGCATGGCCGCAGTGGGGG...TCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGGCGCTGAAGGCACATaGCAAGCTGCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVGAEGT*QAASPQ
Trigger: CTGGGGAGAAGCAGCTTGCCATGTGCCTTCAGCGCC...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGTCTCCCGATTTCTGCTaGGGTGCGTGCTCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVSPDFC*GACSRS
Trigger: GGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGA...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAGGACGGAGGCCGGTTTaGTGCTTTCTTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPGRRPV*CFLRCH
Trigger: ATGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCC...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGGGCGGAAGCAGGGGTaGTCAGGGTTCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVGRKQG*SGFRIL
Trigger: CAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCGGGACTCCACTTTGGTaGAGTCGGGGCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAGTPLW*SRGGSR
Trigger: CCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTCCC...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATACCACACGGCCAGCTTaGCAAGAGCAGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LHQGLRLACQVHGALEQDTTRPA*QEQCPG
Trigger: CCCCGGGCACTGCTCTTGCCAAGCTGGCCGTGTGGT...ATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGTGGGCTGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGAC +
Preference number: 4 (lower is better)
Translates to: DHLQRLLTLIQPQHPDVGCTNWV*GPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA...GCCCACGTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CCCAGGACTCCCAGCAGTCCCTCCGGTGACTTAGAGTGGTCTGCATCCATCGTCCCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PRTPSSPSGDLEWSASIVPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...GACGATGGATGCAGACCACTCTAAGTCACCGGAGGGACTGCTGGGAGTCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTCACCAGTTCCGACACGGTGGTGAAGGGCATGAACTGCAGGACGCTGCCACGGAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: FTSSDTVVKGMNCRTLPRRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...CCGTGGCAGCGTCCTGCAGTTCATGCCCTTCACCACCGTGTCGGAACTGGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGGTTTTCTCCAGGCGCTaGAGGCACATGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGVFSRR*RHMASC
Trigger: GCAGCTTGCCATGTGCCTTCAGCGCCTGGAGAAAAC...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGGGAGCTGCGGGTTGCTaGGATTGGCCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: CSTRDCVSPVRFMVPSSRGAAGC*DWPGSL
Trigger: GAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCC...CCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR TCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCGGTGGAGGGAAACTTaGTCTGCGTGGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGRWRET*SAWLSA
Trigger: AGCAGACAGCCACGCAGATCAAGTTTCCCTCCACCG...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGCCACACACTCCTCCATaGACCACTGCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVPHTPP*TTARTG
Trigger: CCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGG...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp TTCACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: FTIVSCSTRDCVSPVRFMGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...CATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGCTGCAGAGGCTGCCGTaGAGCGCAGCAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWLQRLP*SAAASG
Trigger: TCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAG...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CCCTGCCAGCTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGAGGCACATGGCAAGCTaGTTCTCCCCAGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PCQLADHLQRLLTLIQPQRHMAS*FSPAAG
Trigger: TCCAGCCGCTGGGGAGAAGCAGCTTGCCATGTGCCT...CTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCGATTTCTGCTGGGGTaGGTGCTCTCGGTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGRFLLG*VLSVRF
Trigger: AAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCG...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGCCCTGCCAGCTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCCAGGGTTCAGGATCTTaGCCTCCTCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: GPASWRIICSDFSRSSSPQGSGS*PPQACR
Trigger: CCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTG...GGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCACTGCCCGCAGCGTGTaGTCCTTCCGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSTARSV*SFRVSF
Trigger: GAAGGAGACGCGGAAGGAGCACACGCTGCGGGCAGT...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGTCCTCCATGAACCACTaGACGAACTGGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGSSMNH*TNWVWG
Trigger: CCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGA...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACTGCCACGGCCACCCTaGTCCAGGCAGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEALPRPP*SRQSTH
Trigger: GTGTGTGGACTGCCTGGAGCAGGGTGGCCGTGGCAG...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGCTGCCACGGCCACCCTaGTCCAGGCAGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWLPRPP*SRQSTH
Trigger: GTGTGTGGACTGCCTGGAGCAGGGTGGCCGTGGCAG...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAVKGMN*RTLPRP
Trigger: TGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCAC...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTVKGMN*RTLPRP
Trigger: TGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCAC...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGCCCCCACTGCGGCCATaGCAAGCCCCTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWPPLRP*QAPQSA
Trigger: TGCACTCTGAGGGGCTTGGCATGGCCGCAGTGGGGG...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: CTNWVWGPAVRDPRMEEMAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CGGCCATGCCAAGCCCCTCAGAGTGCAGCAATGGCTTTAGCAGCCACCTGGCGGGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RPCQAPQSAAMALAATWRACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...CCGCCAGGTGGCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGGCATGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GCTCCTAATGAGGGTGCCACACTGCTCGGCCTGACTCCGGAGCTGCGGGTTGCTAGGCCTCCTCTAGTTTaGCGATGTGCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: APNEGATLLGLTPELRVARPPLV*RCAAGP
Trigger: GGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCT...AGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR CCA 90 bp CTGCTCGGCCTGACTCCGGAGCTGCGGGTTGCTGAGATTGGCCAGGATCTCTCCTCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LLGLTPELRVAEIGQDLSSRRGQ*GSRSCA
Trigger: TGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA...GGAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR CCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGCGCCTGTCAGGTTCATaGTGCCCTCGAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVRLSGS*CPRAGS
Trigger: TGATCCTGCTCGAGGGCACCATGAACCTGACAGGCG...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCCACCTGGCGGCCCAGGGGCAGGCTGAGGTCCGTGATGGCCAGAACCACCTTGGGACAAAAAGTGGGGTaGGGATATGCTGCATGCGCT +
Preference number: 4 (lower is better)
Translates to: ATWRPRGRLRSVMARTTLGQKVG*GYAACA
Trigger: AGCGCATGCAGCATATCCCCACCCCACTTTTTGTCC...CAAGGTGGTTCTGGCCATCACGGACCTCAGCCTGCCCCTGGGCCGCCAGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGGGACTCCACTTTGGTaGAGTCGGGGCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LADHLQRLLTLIQPQHPDGTPLW*SRGGSR
Trigger: CCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTCCC...GTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGCCAGGGACTCCACTTTaGTGGAGTCGGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVPGTPL*WSRGGS
Trigger: GCTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGG...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGCCCAGCATCCGGACGTaGGCCACAAGCCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVPSIRT*ATSQAT
Trigger: TGTGGCTTGGCTTGTGGCCCACGTCCGGATGCTGGG...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCAAGTGGCCCTGCCAGCTaGCGGATCATCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPSGPAS*RIICSD
Trigger: GTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACT...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGAGTGGCCCTGCCAGCTaGCGGATCATCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: TRDCVSPVRFMVPSSRITSGPAS*RIICSD
Trigger: GTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACT...CGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp AGCATCCGGACGTGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATAGTGGCCCTGCCAGCTaGCGGATCATCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: SIRTWATSQATAHTARLHSGPAS*RIICSD
Trigger: GTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACT...ATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCCGGATGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAAGGGTGTCAAAGATGTaGATGGAGCGGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPRVSKM*MERLST
Trigger: GGTGGACAGCCGCTCCATCCACATCTTTGACACCCT...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGTGGCCAGAACCACCTTaGGGCTGGACATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGWPEPP*GWTWLT
Trigger: TGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCA...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CCCTCAGAGTGCAGCAATGGCTTTAGCAGCCACCTGGCGGCCCAGGGGCAGGCTTGGCCAGAACCACCTTaGGGCTGGACATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: PSECSNGFSSHLAAQGQAWPEPP*GWTWLT
Trigger: TGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCA...AGCCTGCCCCTGGGCCGCCAGGTGGCTGCTAAAGCCATTGCTGCACTCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CCCTCAGAGTGCAGCAATGGCTTTAGCAGCCACCTGGCGGCCCAGGGGCAGGCTCACTCTGGGAGAAGGTaGGACCAGGACTCGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PSECSNGFSSHLAAQGQAHSGRR*DQDSVQ
Trigger: CTGAACCGAGTCCTGGTCCCACCTTCTCCCAGAGTG...AGCCTGCCCCTGGGCCGCCAGGTGGCTGCTAAAGCCATTGCTGCACTCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491466.5
CDS-3UTR TCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCATCAGGTAGGACAAGATaGGAGGATTGGGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPSGRTR*EDWGMV
Trigger: GACCATCCCCCAATCCTCTCATCTTGTCCTACCTGA...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGTTTTCTCCAGGCGCTaGAGGCACATGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTVFSRR*RHMASC
Trigger: GCAGCTTGCCATGTGCCTTCAGCGCCTGGAGAAAAC...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGGGGTTCTTGGTGCTGCTaGGGGTTTTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PGTASRLSGSWCPRAGSRGSWCC*GFSPGA
Trigger: AGCGCCTGGAGAAAACCCTCAGCAGCACCAAGAACC...CCGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR TCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCCTCGGGAGACTCAATaGGCCCCACGAAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTPRETQ*APRSKL
Trigger: AAGCTTGCTTCGTGGGGCTCATTGAGTCTCCCGAGG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCATGTCCAACAAGGGGGTaGGCTTCAGCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPCPTRG*ASAGTQ
Trigger: TTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACA...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGTCTCCGAGGAGTTGTTaGGCAGGGCCACCAGGGACT +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVSPRSC*AGPPGT
Trigger: AGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGA...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATCTCCGAGGAGTTGTTaGGCAGGGCCACCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPSPRSC*AGPPGT
Trigger: AGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGA...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCTCTCCGAGGAGTTGTTaGGCAGGGCCACCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSSPRSC*AGPPGT
Trigger: AGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGA...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGTGGCGGCTGAGATGCTaGGACAGGCCTCATGCCACT +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVWRLRC*DRPHAT
Trigger: AGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCA...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCGGGAGGAGTAGGAACTaGGGGCACACCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDAGRSRN*GHTTRP
Trigger: TGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCC...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCGAGGGTCCCGCATGTTaGCCGTGTGGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRSCASAPHAQTASWGCSEGPAC*PCGAER
Trigger: CCTCTCAGCTCCACACGGTCAACATGCGGGACCCTC...GGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCCACACACTCCTCCATaGACCACTGCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTPHTPP*TTARTG
Trigger: CCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGAGCAGGCATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: NWVWGPAVRDPRMEEMSRHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...CCTGCTCATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCGGTGGCGGCCAGCTTTaGGGTGAAAGAAATGGAGCG +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAGGGQL*GERNGA
Trigger: CGCTCCATTTCTTTCACCTCAAAGCTGGCCGCCACC...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394127.6
CDS-3UTR TCA 90 bp CGTGGGGATGCTCCTAATGAGGGTGCCACACTGCTCGGCCTGACTCCGGAGCTGAGGAGCACCTGGCCCTaGACTCCTCGATTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RGDAPNEGATLLGLTPELRSTWP*TPRFWH
Trigger: GTGCCAAAATCGAGGAGTTCAGGGCCAGGTGCTCCT...CAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGCATCCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCTCCCGCAGCCGCTCTaGAGAGGCTGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPLPQPL*RGCRAA
Trigger: CGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAG...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCCCGCAGCCGCTCTaGAGAGGCTGCCGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFLPQPL*RGCRAA
Trigger: CGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAG...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGAGGCACATGGCAAGCTaGTTCTCCCCAGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVRHMAS*FSPAAG
Trigger: TCCAGCCGCTGGGGAGAAGCAGCTTGCCATGTGCCT...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGSSLAM*SRARFL
Trigger: CAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGA...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCCCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAPVLCI*SACTDS
Trigger: GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGG...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGCTCCACCAGGGACTaGGTCTCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPCSTRD*VSPVRF
Trigger: GAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCA...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCTGCTCCACCAGGGACTaGGTCTCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AWTVGKPVLCICSACTDSCSTRD*VSPVRF
Trigger: GAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCA...GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp GAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGTTCTGCTGGGGTGCGTaGTCTCGGTCCGCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: EDVCDSGLRPEDQLDVGLFCWGA*SRSALR
Trigger: GCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAA...CAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTTGCCCTCCTCAGGCATaGAGGTCTGCATCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTCPPQA*RSASRS
Trigger: AGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCA...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATGCAGTGCCCTCCTCAGGCATaGAGGTCTGCATCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GRKQGWSGFRILPSSGMQCPPQA*RSASRS
Trigger: AGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCA...CTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR GCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCCAGGGTTCAGGATCTTaGCCTCCTCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAQGSGS*PPQACR
Trigger: CCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTG...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGACTAAACAGTGGCCCTaGCAGCTGGCGGATCATCTG +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVTKQWP*QLADHL
Trigger: CAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGT...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGATCTGCGTGGCTGTCTaGTGCAGCACGTCGGCACAC +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVICVAV*CSTSAH
Trigger: GTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGAT...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTACTGCCCGCAGCGTGTaGTCCTTCCGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCTARSV*SFRVSF
Trigger: GAAGGAGACGCGGAAGGAGCACACGCTGCGGGCAGT...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCACTGCCCGCAGCGTGTaGTCCTTCCGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LAFSPDFCWGACSRSALRTARSV*SFRVSF
Trigger: GAAGGAGACGCGGAAGGAGCACACGCTGCGGGCAGT...GCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGCCAAGCCCCTCAGAGTaGAGCAATGGCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVPSPSE*SNGFSS
Trigger: GCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGG...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACCCCCCACTGCGGCCATaGCAAGCCCCTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHPPLRP*QAPQSA
Trigger: TGCACTCTGAGGGGCTTGGCATGGCCGCAGTGGGGG...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TTCACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGCTCGGGTGCCACCCTaGCCAAGTCCCTGGGATGTG +
Preference number: 4 (lower is better)
Translates to: FTIVSCSTRDCVSPVRFMARVPP*PSPWDV
Trigger: CACATCCCAGGGACTTGGGCAGGGTGGCACCCGAGC...CATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGCAGCGCAGCAGCCAGTaGAGGGCGCTAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWQRSSQ*RALRRA
Trigger: AGCCCTTCTTAGCGCCCTCCACTGGCTGCTGCGCTG...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCACAGCATGAGGAAGGAGATGTCAAACAGCAGGGCCCGGACGGAGGCCGGTTTCAGCGCAGCAGCCAGTaGAGGGCGCTAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: AQHEEGDVKQQGPDGGRFQRSSQ*RALRRA
Trigger: AGCCCTTCTTAGCGCCCTCCACTGGCTGCTGCGCTG...AAACCGGCCTCCGTCCGGGCCCTGCTGTTTGACATCTCCTTCCTCATGCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTTCTCCCCAGCGGCTaGAGTGCCGGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFLLPSG*SAGLQP
Trigger: GGGCTGGAGGCCGGCACTCCAGCCGCTGGGGAGAAG...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGGGCGCTGAAGGCACATaGCAAGCTGCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: TRDCVSPVRFMVPSSRITGAEGT*QAASPQ
Trigger: CTGGGGAGAAGCAGCTTGCCATGTGCCTTCAGCGCC...CGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR CCA 90 bp ACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGTCTCCCGATTTCTGCTaGGGTGCGTGCTCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: TRDCVSPVRFMVPSSRITSPDFC*GACSRS
Trigger: GGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGA...CGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAARRIS*MLGWML
Trigger: CAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTARRIS*MLGWML
Trigger: CAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGGCGGAAGCAGGGGTaGTCAGGGTTCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSGRKQG*SGFRIL
Trigger: CAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCAGGGACTCCACTTTGGTaGAGTCGGGGCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEAGTPLW*SRGGSR
Trigger: CCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTCCC...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCCCAGGGACTCCACTTTaGTGGAGTCGGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: SRSCASAPHAQTASWGCSPGTPL*WSRGGS
Trigger: GCTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGG...GGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCAGTGGCCCTGCCAGCTaGCGGATCATCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDASGPAS*RIICSD
Trigger: GTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACT...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGGTTCTCACTAAACAGTaGCCCTGCCAGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGVLTKQ*PCQLAD
Trigger: ATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAAC...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATAGGGTGTCAAAGATGTaGATGGAGCGGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: LHELGVGASGARPQDGGDRVSKM*MERLST
Trigger: GGTGGACAGCCGCTCCATCCACATCTTTGACACCCT...ATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATCTTCTTCTGGCGGGTaGACGCCTGTCCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPSSSGG*TPVPCG
Trigger: CCCACAAGGGACAGGCGTCCACCCGCCAGAAGAAGA...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACTCTTCTTCTGGCGGGTaGACGCCTGTCCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: LADHLQRLLTLIQPQHPDSSSGG*TPVPCG
Trigger: CCCACAAGGGACAGGCGTCCACCCGCCAGAAGAAGA...GTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCATCATGGATCGGTCTGTaGGGCTCGAAAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPSWIGL*GSKGCW
Trigger: CCAACATCCTTTCGAGCCCCACAGACCGATCCATGA...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMNHCTN*VWGPAV
Trigger: CACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTT...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWNHCTN*VWGPAV
Trigger: CACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTTTCACTCTGAGCAGGTaGCAGCGGTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCFTLSR*QRWRPA
Trigger: AGCTGGCCGCCACCGCTGCCACCTGCTCAGAGTGAA...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394126.5
ENST00000394127.6
CDS-3UTR CCA 90 bp CTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCCCTGCCCAAGTCCCTaGGATGTGTGCAATGAGGCC +
Preference number: 4 (lower is better)
Translates to: LHQGLRLACQVHGALEQDPCPSP*DVCNEA
Trigger: GGCCTCATTGCACACATCCCAGGGACTTGGGCAGGG...ATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CCA 90 bp TCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCTGGCTGTTGGTTGATTaGCTCGGGTGCCACCCTGCC +
Preference number: 4 (lower is better)
Translates to: STRDCVSPVRFMVPSSRIWLLVD*LGCHPA
Trigger: GGCAGGGTGGCACCCGAGCCAATCAACCAACAGCCA...GATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
3UTR CAA 72 bp AGGGGCAGGCTGAGGTCCGTGATGGCCAGAACCACCTaGGGGCTGGACATGGCTGACACCTTCACCAGTTCC +
Preference number: 4 (lower is better)
Translates to: RGRLRSVMARTT*GLDMADTFTSS
Trigger: GGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCATCACGGACCTCAGCCTGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGTCAGGTAGGACAAGATaGGAGGATTGGGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGSGRTR*EDWGMV
Trigger: GACCATCCCCCAATCCTCTCATCTTGTCCTACCTGA...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCGGAGCTGCGGGTTGCTaGGATTGGCCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDAGAAGC*DWPGSL
Trigger: GAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCC...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGGGAGCTGCGGGTTGCTaGGATTGGCCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMGAAGC*DWPGSL
Trigger: GAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCC...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGGAGCTGCGGGTTGCTaGGATTGGCCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCGAAGC*DWPGSL
Trigger: GAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCC...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGGCTGGACATGGCTGACACCTTCACCAGTTCCGACACGGTGGTGAAGGGCATGGGAGCTGCGGGTTGCTaGGATTGGCCAGGATCTCTC +
Preference number: 4 (lower is better)
Translates to: GLDMADTFTSSDTVVKGMGAAGC*DWPGSL
Trigger: GAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCC...CATGCCCTTCACCACCGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCACCTCGGGAGACTCAATaGGCCCCACGAAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPPRETQ*APRSKL
Trigger: AAGCTTGCTTCGTGGGGCTCATTGAGTCTCCCGAGG...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCACAGCAGTCCCTCCGGTaGCTTAGAGTGGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPQQSLR*LRVVCI
Trigger: GATGCAGACCACTCTAAGTCACCGGAGGGACTGCTG...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTTCTCCGAGGAGTTGTTaGGCAGGGCCACCAGGGACT +
Preference number: 4 (lower is better)
Translates to: HHRQLLHQGLRLACQVHGSPRSC*AGPPGT
Trigger: AGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGA...ACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGCGGCTGAGATGCTaGGACAGGCCTCATGCCACT +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMWRLRC*DRPHAT
Trigger: AGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CGGACGTGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCTTCCAAGATGGCGGCTaGGATGCTGAGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RTWATSQATAHTARLHTFFQDGG*DAETGL
Trigger: GAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAA...GAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR TCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCACGGTGGAGGGAAACTTaGTCTGCGTGGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPRWRET*SAWLSA
Trigger: AGCAGACAGCCACGCAGATCAAGTTTCCCTCCACCG...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACGAGGGTCCCGCATGTTaGCCGTGTGGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHEGPAC*PCGAER
Trigger: CCTCTCAGCTCCACACGGTCAACATGCGGGACCCTC...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCCCACACACTCCTCCATaGACCACTGCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSPHTPP*TTARTG
Trigger: CCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGG...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp CATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCCACACACTCCTCCATaGACCACTGCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: HRQLLHQGLRLACQVHGAPHTPP*TTARTG
Trigger: CCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGG...GGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWGAGHG*HLHQFR
Trigger: TCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCC...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCGAGHG*HLHQFR
Trigger: TCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCTCGGCACAGTCCGATaGATTCCTCTGCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTLGTVR*IPLLCR
Trigger: ACGGCAAAGCAGAGGAATGCATCGGACTGTGCCGAG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AATGAGGGTGCCACACTGCTCGGCCTGACTCCGGAGCTGCGGGTTGCTGAGATTAGGCACATGGCAAGCTaGTTCTCCCCAGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NEGATLLGLTPELRVAEIRHMAS*FSPAAG
Trigger: TCCAGCCGCTGGGGAGAAGCAGCTTGCCATGTGCCT...AATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCTGCATCTGCTCCGCATaGACAGACAGCATCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSCICSA*TDSIVG
Trigger: CCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCA...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACTCCTCCATGAACCACTGCACGAACTGGGTGTGGGGGCCAGCGGTGCGATGCATCTGCTCCGCATaGACAGACAGCATCGTGGGG +
Preference number: 4 (lower is better)
Translates to: THSSMNHCTNWVWGPAVRCICSA*TDSIVG
Trigger: CCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCA...TCGCACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGTGCATCTGCTCCGCATaGACAGACAGCATCGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRRGQWGSRSCASAPHAQCICSA*TDSIVG
Trigger: CCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCA...CTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp AGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCAGGGAAGCCGGTCTTGTaGATCTGCTCCGCATGCACA +
Preference number: 4 (lower is better)
Translates to: SRITAWTVGKPVLCICSAGKPVL*ICSACT
Trigger: TGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCC...TGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCACTGTCAGGTTCATGGTaGCCTCGAGCAGGATCACGG +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPLSGSW*PRAGSR
Trigger: CCGTGATCCTGCTCGAGGGCACCATGAACCTGACAG...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGTGGGCCTGTCAGGTTCATGGTaGCCTCGAGCAGGATCACGG +
Preference number: 4 (lower is better)
Translates to: DHLQRLLTLIQPQHPDVGLSGSW*PRAGSR
Trigger: CCGTGATCCTGCTCGAGGGCACCATGAACCTGACAG...GCCCACGTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTGCTCCACCAGGGACTaGGTCTCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDACSTRD*VSPVRF
Trigger: GAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCA...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTTGCTCCACCAGGGACTaGGTCTCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCCSTRD*VSPVRF
Trigger: GAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCA...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGGGGGTGGGGATATGCTaGATGCGCTTCACCATCGTC +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVGVGIC*MRFTIV
Trigger: GACGATGGTGAAGCGCATGCAGCATATCCCCACCCC...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGTCAGACAGAAGCCCCTaGTTGCCACATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGSDRSP*LPHSWS
Trigger: GCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGA...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGCACCTCAGCTCCTGTaGGCGACTCGGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSAPQLL*ATRTES
Trigger: TGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GTCGGGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATAGCTGGCGGATCATCTaGAGCGACTTCTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: VGAEAGVVRVQDLALLRHSWRII*SDFSRS
Trigger: TGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCT...ATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR GCA 90 bp CCCTGCCAGCTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGAGCTGGCGGATCATCTaGAGCGACTTCTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: PCQLADHLQRLLTLIQPQSWRII*SDFSRS
Trigger: TGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCT...CTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGGCACGTCGGCACACATaGGCTCCAGGATCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVARRHT*APGSSS
Trigger: TGAACTCGATCCTGGAGCGCATGTGTGCCGACGTGC...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ATGTCAAACAGCAGGGCCCGGACGGAGGCCGGTTTGGTGCTTTCTTCGCTGCCATGCGTGGCTGTCTGCTaGAGCACGTCGGCACACATG +
Preference number: 4 (lower is better)
Translates to: MSNSRARTEAGLVLSSLPCVAVC*STSAHM
Trigger: CATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCA...TGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCCGGGCCCTGCTGTTTGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCCTGCCACGGCCACCCTaGTCCAGGCAGTCCACACAC +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASLPRPP*SRQSTH
Trigger: GTGTGTGGACTGCCTGGAGCAGGGTGGCCGTGGCAG...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCVKGMN*RTLPRP
Trigger: TGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCAC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWVKGMN*RTLPRP
Trigger: TGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCAC...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGTGGGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: RIICSDFSRSSSPSIRTWAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...CCACGTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAAGCAGGTGGCAGCGGTaGCGGCCAGCGCACAATCCA +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTSRWQR*RPAHNP
Trigger: TGGATTGTGCGCTGGCCGCCACCGCTGCCACCTGCT...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356271.7
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCAGGCGCTGAAGGCACATaGCAAGCTGCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEAGAEGT*QAASPQ
Trigger: CTGGGGAGAAGCAGCTTGCCATGTGCCTTCAGCGCC...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCAGAACCACCTTGGGGCTGGACATGGCTGACACCTTCACCAGTTCCGACACGGGGCGCTGAAGGCACATaGCAAGCTGCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PEPPWGWTWLTPSPVPTRGAEGT*QAASPQ
Trigger: CTGGGGAGAAGCAGCTTGCCATGTGCCTTCAGCGCC...CCGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGGCCTCCTCTAGTTTaGCGATGTGCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWRPPLV*RCAAGP
Trigger: GGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTAGGCCTCCTCTAGTTTaGCGATGTGCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QWAPPGGSAGCWAGCWHSRPPLV*RCAAGP
Trigger: GGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCT...AGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: EAGLVHLLRMHRQHRGDASRITA*TVGKPV
Trigger: GACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT...AGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR CCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCAGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPARRIS*MLGWML
Trigger: CAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCATCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTG +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPSGDLE*SASIVL
Trigger: CAAGACGATGGATGCAGACCACTCTAAGTCACCGGA...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGGCTGGACATGGCTGACACCTTCACCAGTTCCGACACGGTGGTGAAGGGCATGATTTCAGCTTTCCAGTaGCGGCGGCGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GLDMADTFTSSDTVVKGMISAFQ*RRRQPA
Trigger: TGCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAAT...CATGCCCTTCACCACCGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCAGGACGGAGGCCGGTTTaGTGCTTTCTTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPGRRPV*CFLRCH
Trigger: ATGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCC...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGACGGAGGCCGGTTTaGTGCTTTCTTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSGRRPV*CFLRCH
Trigger: ATGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGGGCCACATGGCACAGCATGAGGAAGGAGATGTCAAACAGCAGGGCCCGGACGGGCGGAAGCAGGGGTaGTCAGGGTTCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: LGHMAQHEEGDVKQQGPDGRKQG*SGFRIL
Trigger: CAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC...GTCCGGGCCCTGCTGTTTGACATCTCCTTCCTCATGCTGTGCCATGTGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp TGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGCCAGGGACTCCACTTTaGTGGAGTCGGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: WATSQATAHTARLHTFPLPGTPL*WSRGGS
Trigger: GCTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGG...CAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CCA 90 bp TGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGCCCAGCATCCGGACGTaGGCCACAAGCCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: WATSQATAHTARLHTFPLPSIRT*ATSQAT
Trigger: TGTGGCTTGGCTTGTGGCCCACGTCCGGATGCTGGG...CAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCTGTCAAAGATGTGGATaGAGCGGCTGTCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGACQRCG*SGCPPS
Trigger: GCTGGGTGGACAGCCGCTCCATCCACATCTTTGACA...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCACCACACGGCCAGCTTaGCAAGAGCAGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASTTRPA*QEQCPG
Trigger: CCCCGGGCACTGCTCTTGCCAAGCTGGCCGTGTGGT...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GTGGAGGGAAACTTGATCTGCGTGGCTGTCTGCTGCAGCACGTCGGCACACATGCGGTGTCTCTTCTTCTaGCGGGTGGACGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VEGNLICVAVCCSTSAHMRCLFF*RVDACP
Trigger: GGGACAGGCGTCCACCCGCCAGAAGAAGAGACACCG...CATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGTCATGGATCGGTCTGTaGGGCTCGAAAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGSWIGL*GSKGCW
Trigger: CCAACATCCTTTCGAGCCCCACAGACCGATCCATGA...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGAAGAGGGAGCTGCTCATaGATCGGTCTGTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: WGSRSCASAPHAQTASWGRGSCS*IGLWGS
Trigger: CGAGCCCCACAGACCGATCCATGAGCAGCTCCCTCT...TCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCTGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGAC +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASCTNWV*GPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHNHCTN*VWGPAV
Trigger: CACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTT...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCGAACCACCTTGGGGCTaGACATGGCTGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAEPPWG*TWLTPS
Trigger: TGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTC...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GTCGGGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATGAACCACCTTGGGGCTaGACATGGCTGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: VGAEAGVVRVQDLALLRHEPPWG*TWLTPS
Trigger: TGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTC...ATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCCCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCAGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACTCCTCCATGAACCACTGCACGAACTGGGTGTGGGGGCCAGCGGTGCGATCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: THSSMNHCTNWVWGPAVRSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...TCGCACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
3UTR CAA 72 bp AGCAGGATCACGGCGTGGACAGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGCACAGACAGCATCGTG +
Preference number: 4 (lower is better)
Translates to: SRITAWTVGKPV*CICSACTDSIV
Trigger: CACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
3UTR CAA 72 bp TCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTaGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGC +
Preference number: 4 (lower is better)
Translates to: SARRISWMLGWM*AFSPDFCWGAC
Trigger: GCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTTTCATTATTTCACTCTaGGCAGGTGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTFIISL*AGGSGG
Trigger: GCCACCGCTGCCACCTGCTCAGAGTGAAATAATGAA...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGGGTTCTTGGTGCTGCTaGGGGTTTTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWGSWCC*GFSPGA
Trigger: AGCGCCTGGAGAAAACCCTCAGCAGCACCAAGAACC...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GTTGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGCGGGTTCTTGGTGCTGCTaGGGGTTTTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: VGILSRFLLGCVLSVRFAGSWCC*GFSPGA
Trigger: AGCGCCTGGAGAAAACCCTCAGCAGCACCAAGAACC...CGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGCCTCGGGAGACTCAATaGGCCCCACGAAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWPRETQ*APRSKL
Trigger: AAGCTTGCTTCGTGGGGCTCATTGAGTCTCCCGAGG...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCGGACAGAATCACCTCTaGACCATAGGTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HRQLLHQGLRLACQVHGAGQNHL*TIGLGH
Trigger: GTGGCCCAGACCTATGGTTCAGAGGTGATTCTGTCC...GGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTTCCAAGATGGCGGCTaGGATGCTGAGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMFQDGG*DAETGL
Trigger: GAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGCGGTGGAGGGAAACTTaGTCTGCGTGGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: EDVCDSGLRPEDQLDVGLRWRET*SAWLSA
Trigger: AGCAGACAGCCACGCAGATCAAGTTTCCCTCCACCG...CAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACTTGGAGGAGTCAGTaGGCAGGCCAGGTAGGATGT +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVTWRSQ*AGQVGC
Trigger: ACATCCTACCTGGCCTGCTCACTGACTCCTCCAAGT...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAGGGAGGAGTAGGAACTaGGGGCACACCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTGRSRN*GHTTRP
Trigger: TGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCC...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCACCAGGGGGAAGAGGCTaGTATAATCCTCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPPGGRG*YNPQCL
Trigger: AAGACATTGAGGATTATATCAGCCTCTTCCCCCTGG...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGAGGGTCCCGCATGTTaGCCGTGTGGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTEGPAC*PCGAER
Trigger: CCTCTCAGCTCCACACGGTCAACATGCGGGACCCTC...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGCCACACACTCCTCCATaGACCACTGCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMPHTPP*TTARTG
Trigger: CCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGG...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAAGGGCGCACACAGGGGTaGCCACTGGGCTTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGEGRTQG*PLGLWS
Trigger: GGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCC...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp CTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATGGGGACACAGCCAGCTaGCTTCAGAAGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: LHQGLRLACQVHGALEQDGDTAS*LQKVWH
Trigger: ATGCCATACCTTCTGAAGTCAGCTGGCTGTGTCCCC...ATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAGCTTGCAAAATGGCTTaGTTCAGGTTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPACKMA*FRLTTF
Trigger: GAAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGC...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCGCTCCTTCCAGGCTTaGAAAATGGCTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTRSFQA*KMACFR
Trigger: CCTGAAGCAAGCCATTTTGCAAGCCTGGAAGGAGCG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCATGATGTCCAGCAATaGCTGGACACACAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: HRQLLHQGLRLACQVHGAHDVQQ*LDTQVP
Trigger: CGGGACCTGTGTGTCCAGGCATTGCTGGACATCATG...GGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCTGCAGAGGCTGCCGTaGAGCGCAGCAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPLQRLP*SAAASG
Trigger: TCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAG...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCTGCATCTGCTCCGCATaGACAGACAGCATCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCCICSA*TDSIVG
Trigger: CCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCA...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCPVLCI*SACTDS
Trigger: GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGG...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEAPVLCI*SACTDS
Trigger: GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGG...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGGCTGGATGTTGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: GLDVGILSRFLLGCVLSVPVLCI*SACTDS
Trigger: GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGG...GACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGGGGAAGCCGGTCTTGTaGATCTGCTCCGCATGCACA +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMGKPVL*ICSACT
Trigger: TGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCC...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTGTCAGGTTCATGGTaGCCTCGAGCAGGATCACGG +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCLSGSW*PRAGSR
Trigger: CCGTGATCCTGCTCGAGGGCACCATGAACCTGACAG...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCATTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEAFTIVS*STRDCV
Trigger: GACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AATGAGGGTGCCACACTGCTCGGCCTGACTCCGGAGCTGCGGGTTGCTGAGATTTTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: NEGATLLGLTPELRVAEIFTIVS*STRDCV
Trigger: GACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA...AATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTTGGGGATATGCTGCATaGGCTTCACCATCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTWGYAA*ASPSSA
Trigger: AGCTGACGATGGTGAAGCGCATGCAGCATATCCCCA...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCAGGGGTGGGGATATGCTaGATGCGCTTCACCATCGTC +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEAGVGIC*MRFTIV
Trigger: GACGATGGTGAAGCGCATGCAGCATATCCCCACCCC...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCAAGTGGGGTGGGGATATaGTGCATGCGCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPSGVGI*CMRFTI
Trigger: GATGGTGAAGCGCATGCAGCATATCCCCACCCCACT...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCCCTTGTGGGAGGAGTAGGAACTGAGGGCACACCACACGGCCAGCTTGGCAAGCGATTTCTGCTGGGGTaGGTGCTCTCGGTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SLVGGVGTEGTPHGQLGKRFLLG*VLSVRF
Trigger: AAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCG...CTTGCCAAGCTGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCCACAAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGTTCTCTCCCGATTTCTaGTGGGGTGCGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWFSPDF*WGACSR
Trigger: CCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAA...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGCACCTCAGCTCCTGTaGGCGACTCGGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCAPQLL*ATRTES
Trigger: TGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATGCAGTCAGGCATGCAGGTCTaGATCCAGGTCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GRKQGWSGFRILPSSGMQSGMQV*IQVSKK
Trigger: CTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGA...CTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR GCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCATGCCCTCCTCAGGCATaGAGGTCTGCATCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEACPPQA*RSASRS
Trigger: AGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCA...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTGCCCTCCTCAGGCATaGAGGTCTGCATCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDACPPQA*RSASRS
Trigger: AGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCA...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGCAGGGTTCAGGATCTTaGCCTCCTCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMQGSGS*PPQACR
Trigger: CCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTG...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCACTAAACAGTGGCCCTaGCAGCTGGCGGATCATCTG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSTKQWP*QLADHL
Trigger: CAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGT...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGACGTGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCACTAAACAGTGGCCCTaGCAGCTGGCGGATCATCTG +
Preference number: 4 (lower is better)
Translates to: GRGPQAKPQHTPPDCIPSTKQWP*QLADHL
Trigger: CAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGT...GGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR GCA 90 bp GATGCTCCTAATGAGGGTGCCACACTGCTCGGCCTGACTCCGGAGCTGCGGGTTGAGGGAAACTTGATCTaGGTGGCTGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: DAPNEGATLLGLTPELRVEGNLI*VAVCCS
Trigger: GCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTC...AACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCACCAGGGTCACTTGCTaGATGTCCAGGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGATRVTC*MSRQKM
Trigger: CATCTTCTGCCTGGACATGCAGCAAGTGACCCTGGT...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTAGGCTGAGAGGGAGCTaGTCATGGATCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCRLRGS*SWIGLW
Trigger: CCACAGACCGATCCATGAGCAGCTCCCTCTCAGCCT...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTTCCTCCATGAACCACTaGACGAACTGGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCSSMNH*TNWVWG
Trigger: CCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGA...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTCCTCCATGAACCACTaGACGAACTGGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMSSMNH*TNWVWG
Trigger: CCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCACCAAGCCCCTCAGAGTaGAGCAATGGCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPPSPSE*SNGFSS
Trigger: GCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGG...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCACTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TTCACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTTGATTGGCTCGGGTaGCACCCTGCCCAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: FTIVSCSTRDCVSPVRFMVDWLG*HPAQVP
Trigger: AGGGACTTGGGCAGGGTGGCACCCGAGCCAATCAAC...CATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CCA 90 bp CACTTCATCTGCACTAGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGAGCAGGTGGCAGCGGTaGCGGCCAGCGCACAATCCA +
Preference number: 4 (lower is better)
Translates to: HFICTSFISEELLSRATRSRWQR*RPAHNP
Trigger: TGGATTGTGCGCTGGCCGCCACCGCTGCCACCTGCT...CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCTAGTGCAGATGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp TGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGGGGATGGTCCAATCATaGCCTGCTCTAGTAACGCAT +
Preference number: 4 (lower is better)
Translates to: CTNWVWGPAVRDPRMEEMGMVQS*PALVTH
Trigger: ATGCGTTACTAGAGCAGGCCATGATTGGACCATCCC...CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGCGCAGCAGCCAGTaGAGGGCGCTAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTQRSSQ*RALRRA
Trigger: AGCCCTTCTTAGCGCCCTCCACTGGCTGCTGCGCTG...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGAGAGAGAATGCTCGATaGCAGTCCAAGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGRENAR*QSKKRP
Trigger: AGGCCTCTTCTTGGACTGCCATCGAGCATTCTCTCT...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TGCTCCAGGCAGTCCACACACTCCTCCATGAACCACTGCACGAACTGGGTGTGGTCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: CSRQSTHSSMNHCTNWVWSRRGQ*GSRSCA
Trigger: TGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA...CCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGGACTGCCTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTSRITA*TVGKPV
Trigger: GACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGCCTGTCAGGTTCATaGTGCCCTCGAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEARLSGS*CPRAGS
Trigger: TGATCCTGCTCGAGGGCACCATGAACCTGACAGGCG...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGTCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTG +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGSGDLE*SASIVL
Trigger: CAAGACGATGGATGCAGACCACTCTAAGTCACCGGA...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ATGTCAAACAGCAGGGCCCGGACGGAGGCCGGTTTGGTGCTTTCTTCGCTGCCAGGACGGAGGCCGGTTTaGTGCTTTCTTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: MSNSRARTEAGLVLSSLPGRRPV*CFLRCH
Trigger: ATGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCC...TGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCCGGGCCCTGCTGTTTGACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGTTCTCACTAAACAGTaGCCCTGCCAGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSVLTKQ*PCQLAD
Trigger: ATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAAC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CGGACGTGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCGTTCTCACTAAACAGTaGCCCTGCCAGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: RTWATSQATAHTARLHTFVLTKQ*PCQLAD
Trigger: ATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAAC...GAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CCA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCCTTCTCCAGCACCTTaGCAAAAATGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGPSPAP*QKCPSA
Trigger: TGCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGG...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACACCACACGGCCAGCTTaGCAAGAGCAGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNTTRPA*QEQCPG
Trigger: CCCCGGGCACTGCTCTTGCCAAGCTGGCCGTGTGGT...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTNHCTN*VWGPAV
Trigger: CACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTT...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGTCCCTTGGAGGCGCCTaGGGCTGCGCCAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NFERRNRETSWRSGVRSGSLGGA*GCASPQ
Trigger: CTGGGGACTGGCGCAGCCCCAGGCGCCTCCAAGGGA...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGEPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CAA 72 bp TGCTCGATGGCAGTCCAAGAAGAGGCCTCCTCTAGTTaGGCGATGTGCAGCAGGGCCCGGTTCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: CSMAVQEEASSS*AMCSRARFLVL
Trigger: CAGCACCAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTCTTCTTGGACTGCCATCGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CAA 72 bp GCGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTaGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ACSRSALRLAIR*LTLASDRSPCL
Trigger: CAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGACGCATCTGCCAGGTTaGGAATATCCCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWTHLPG*EYPRWL
Trigger: GAGCCACCTGGGATATTCTCAACCTGGCAGATGCGT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCACGCATCTGCCAGGTTaGGAATATCCCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: WAPPGGSAGCWAGCWHSLTHLPG*EYPRWL
Trigger: GAGCCACCTGGGATATTCTCAACCTGGCAGATGCGT...GAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp GCGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCCAGCAGTCCCTCCGGTaGCTTAGAGTGGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: ALSHKVVDAGLRQKPLLAQQSLR*LRVVCI
Trigger: GATGCAGACCACTCTAAGTCACCGGAGGGACTGCTG...GGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCCACATGGCACAGCATaGGGAAGGAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTPHGTA*GRRCQT
Trigger: TGTTTGACATCTCCTTCCTCATGCTGTGCCATGTGG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGGGACAGAATCACCTCTaGACCATAGGTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWGQNHL*TIGLGH
Trigger: GTGGCCCAGACCTATGGTTCAGAGGTGATTCTGTCC...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGGCTGGATGTTGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCGGACAGAATCACCTCTaGACCATAGGTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLDVGILSRFLLGCVLSVGQNHL*TIGLGH
Trigger: GTGGCCCAGACCTATGGTTCAGAGGTGATTCTGTCC...GACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATGGCGGCTGAGATGCTaGGACAGGCCTCATGCCACT +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTWRLRC*DRPHAT
Trigger: AGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACTTCCAAGATGGCGGCTaGGATGCTGAGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHFQDGG*DAETGL
Trigger: GAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAA...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCGGGAGGAGTAGGAACTaGGGGCACACCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFGRSRN*GHTTRP
Trigger: TGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCC...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TTCATCTGCACTAGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGGACGGGAGGAGTAGGAACTaGGGGCACACCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: FICTSFISEELLSRATRDGRSRN*GHTTRP
Trigger: TGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCC...GTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCTAGTGCAGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTGAGHG*HLHQFR
Trigger: TCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCC...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTCATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGCTTGCAAAATGGCTTaGTTCAGGTTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVACKMA*FRLTTF
Trigger: GAAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGC...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCACGCTCCTTCCAGGCTTaGAAAATGGCTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPRSFQA*KMACFR
Trigger: CCTGAAGCAAGCCATTTTGCAAGCCTGGAAGGAGCG...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCTCCGATGCATTCCTCTaGTTTGCCGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSSDAFL*FAVTAQ
Trigger: CTGAGCTGTCACGGCAAAGCAGAGGAATGCATCGGA...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGTCCGATGCATTCCTCTaGTTTGCCGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVSDAFL*FAVTAQ
Trigger: CTGAGCTGTCACGGCAAAGCAGAGGAATGCATCGGA...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp CATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCTCCGATGCATTCCTCTaGTTTGCCGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HRQLLHQGLRLACQVHGASDAFL*FAVTAQ
Trigger: CTGAGCTGTCACGGCAAAGCAGAGGAATGCATCGGA...GGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWSSLAM*SRARFL
Trigger: CAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGA...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMSSLAM*SRARFL
Trigger: CAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGCCCTGAACTCCTCGATTTTGGCACTCCCTCCGGCACACGAAACCACACAGGACCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: GPELLDFGTPSGTRNHTGPVLCI*SACTDS
Trigger: GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGG...TCCTGTGTGGTTTCGTGTGCCGGAGGGAGTGCCAAAATCGAGGAGTTCAGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACTTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHFTIVS*STRDCV
Trigger: GACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGTGGGGATATGCTGCATaGGCTTCACCATCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVWGYAA*ASPSSA
Trigger: AGCTGACGATGGTGAAGCGCATGCAGCATATCCCCA...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACCAGGGTTCAGGATCTTaGCCTCCTCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHQGSGS*PPQACR
Trigger: CCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTG...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGAGCTGGCGGATCATCTaGAGCGACTTCTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMSWRII*SDFSRS
Trigger: TGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCT...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCCGTGATGGCCAGAACCACCTTGGGGCTGGACATGGCTGACACCTTCACCACTAAACAGTGGCCCTaGCAGCTGGCGGATCATCTG +
Preference number: 4 (lower is better)
Translates to: RSVMARTTLGLDMADTFTTKQWP*QLADHL
Trigger: CAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGT...GGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCATCACGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGAGGGAAACTTGATCTaGGTGGCTGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCEGNLI*VAVCCS
Trigger: GCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCGAGGGAAACTTGATCTaGGTGGCTGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDAEGNLI*VAVCCS
Trigger: GCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTC...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGTAGAGCAGCTCCACTaGCCGCAGCGTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTVEQLH*PQRVLL
Trigger: AAGGAGCACACGCTGCGGGCAGTGGAGCTGCTCTAC...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGGACTCCACTTTGGTGGTAGAGCAGCTCCACTaGCCGCAGCGTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFISEELLSRATRDSTLVVEQLH*PQRVLL
Trigger: AAGGAGCACACGCTGCGGGCAGTGGAGCTGCTCTAC...CACCAAAGTGGAGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp GGACGTGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCACCAGGGTCACTTGCTaGATGTCCAGGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: GRGPQAKPQHTPPDCIPSTRVTC*MSRQKM
Trigger: CATCTTCTGCCTGGACATGCAGCAAGTGACCCTGGT...GGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCAGGACCAGGGTCACTTaGTGCATGTCCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCRTRVT*CMSRQK
Trigger: CTTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCT...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTAGGACCAGGGTCACTTaGTGCATGTCCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCRTRVT*CMSRQK
Trigger: CTTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCT...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCATCAACTTCGAAGGCTaGACATCGTCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSINFEG*TSSRGK
Trigger: CTTCCCCCTGGACGATGTGCAGCCTTCGAAGTTGAT...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCCCAAGCCCCTCAGAGTaGAGCAATGGCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDAPSPSE*SNGFSS
Trigger: GCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGG...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TTCACCAGTTCCGACACGGTGGTGAAGGGCATGAACTGCAGGACGCTGCCACGGCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: FTSSDTVVKGMNCRTLPRLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...CCGTGGCAGCGTCCTGCAGTTCATGCCCTTCACCACCGTGTCGGAACTGGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVGCEAR*LIFPHC
Trigger: GCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCC...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCAGCGCAGCAGCCAGTaGAGGGCGCTAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNQRSSQ*RALRRA
Trigger: AGCCCTTCTTAGCGCCCTCCACTGGCTGCTGCGCTG...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GAACTCCTCGATTTTGGCACTCCCTCCGGCACACGAAACCACACAGGAAGGCTTCAGCGCAGCAGCCAGTaGAGGGCGCTAAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: ELLDFGTPSGTRNHTGRLQRSSQ*RALRRA
Trigger: AGCCCTTCTTAGCGCCCTCCACTGGCTGCTGCGCTG...AAGCCTTCCTGTGTGGTTTCGTGTGCCGGAGGGAGTGCCAAAATCGAGGAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGCTTCTCCCCAGCGGCTaGAGTGCCGGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRLLPSG*SAGLQP
Trigger: GGGCTGGAGGCCGGCACTCCAGCCGCTGGGGAGAAG...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAGGCGCTGAAGGCACATaGCAAGCTGCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTGAEGT*QAASPQ
Trigger: CTGGGGAGAAGCAGCTTGCCATGTGCCTTCAGCGCC...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCTCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASSRRGQ*GSRSCA
Trigger: TGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACCGCCTGTCAGGTTCATaGTGCCCTCGAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHRLSGS*CPRAGS
Trigger: TGATCCTGCTCGAGGGCACCATGAACCTGACAGGCG...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGACAAAAAGTGGGGTaGGGATATGCTGCATGCGCT +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSGQKVG*GYAACA
Trigger: AGCGCATGCAGCATATCCCCACCCCACTTTTTGTCC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTTCACAGTTGCAGCGCTaGTCAGCTTTGTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTSQLQR*SALSNK
Trigger: CTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGA...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGAGCTGGATGTTGGGCTaGATGTTGGCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TRDCVSPVRFMVPSSRITSWMLG*MLAFSP
Trigger: GGGAGAGAATGCCAACATCCAGCCCAACATCCAGCT...CGTGATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATGCAGTCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTG +
Preference number: 4 (lower is better)
Translates to: GRKQGWSGFRILPSSGMQSGDLE*SASIVL
Trigger: CAAGACGATGGATGCAGACCACTCTAAGTCACCGGA...CTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp TTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTTGGAGCAGGAAGATTTCAGCTTTCCAGTaGCGGCGGCGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LTLASDRSPCLPHSWSRKISAFQ*RRRQPA
Trigger: TGCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAAT...CTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCGGGCGGAAGCAGGGGTaGTCAGGGTTCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASGRKQG*SGFRIL
Trigger: CAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCCCAGCATCCGGACGTaGGCCACAAGCCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNPSIRT*ATSQAT
Trigger: TGTGGCTTGGCTTGTGGCCCACGTCCGGATGCTGGG...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTAGTGGCCCTGCCAGCTaGCGGATCATCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPSGPAS*RIICSD
Trigger: GTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACT...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCAGTGGCCCTGCCAGCTaGCGGATCATCTGCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFSGPAS*RIICSD
Trigger: GTCGCTGCAGATGATCCGCCAGCTGGCAGGGCCACT...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGGTTCTCACTAAACAGTaGCCCTGCCAGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMVLTKQ*PCQLAD
Trigger: ATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAAC...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCTGTCAAAGATGTGGATaGAGCGGCTGTCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCCQRCG*SGCPPS
Trigger: GCTGGGTGGACAGCCGCTCCATCCACATCTTTGACA...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTAGGGTGTCAAAGATGTaGATGGAGCGGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCRVSKM*MERLST
Trigger: GGTGGACAGCCGCTCCATCCACATCTTTGACACCCT...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTAGGCCAGGTAGGATGTaGCCCAGCAGGACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPRPGRM*PSRTRV
Trigger: GACCCTGGTCCTGCTGGGCCACATCCTACCTGGCCT...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACTGGCCAGAACCACCTTaGGGCTGGACATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHWPEPP*GWTWLT
Trigger: TGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCA...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TGCTCCAGGCAGTCCACACACTCCTCCATGAACCACTGCACGAACTGGGTGTGGTGGCCAGAACCACCTTaGGGCTGGACATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: CSRQSTHSSMNHCTNWVWWPEPP*GWTWLT
Trigger: TGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCA...CCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGGACTGCCTGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp ATGGCCAGAACCACCTTGGGGCTGGACATGGCTGACACCTTCACCAGTTCCGACAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: MARTTLGLDMADTFTSSDNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...GTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAGTTTTCTCCAGGCGCTaGAGGCACATGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGVFSRR*RHMASC
Trigger: GCAGCTTGCCATGTGCCTTCAGCGCCTGGAGAAAAC...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGTTCTTGGTGCTGCTaGGGGTTTTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTGSWCC*GFSPGA
Trigger: AGCGCCTGGAGAAAACCCTCAGCAGCACCAAGAACC...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGTGTCCAACAAGGGGGTaGGCTTCAGCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWCPTRG*ASAGTQ
Trigger: TTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACA...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TTGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCTGTCCAACAAGGGGGTaGGCTTCAGCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: LAFSPDFCWGACSRSALRCPTRG*ASAGTQ
Trigger: TTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACA...GCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACACAGCAGTCCCTCCGGTaGCTTAGAGTGGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTQQSLR*LRVVCI
Trigger: GATGCAGACCACTCTAAGTCACCGGAGGGACTGCTG...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACTTCATCTGCACTAGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGTCTCCGAGGAGTTGTTaGGCAGGGCCACCAGGGACT +
Preference number: 4 (lower is better)
Translates to: HFICTSFISEELLSRATRSPRSC*AGPPGT
Trigger: AGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGA...CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCTAGTGCAGATGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR TCA 90 bp CACTTCATCTGCACTAGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGTGGCGGCTGAGATGCTaGGACAGGCCTCATGCCACT +
Preference number: 4 (lower is better)
Translates to: HFICTSFISEELLSRATRWRLRC*DRPHAT
Trigger: AGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCA...CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCTAGTGCAGATGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR TCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACATTCCAAGATGGCGGCTaGGATGCTGAGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTFQDGG*DAETGL
Trigger: GAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAA...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGTTCCAAGATGGCGGCTaGGATGCTGAGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSVRFALSHKVVDAGLRQFQDGG*DAETGL
Trigger: GAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAA...CTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCGCAAAGCGGACCGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp GCGCTGGTCAGCTTTGTCCAACAAGGGGGTGAGCTTCAGCAGGAACTCAAAAGCGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: ALVSFVQQGGELQQELKSGAGHG*HLHQFR
Trigger: TCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCC...GCTTTTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACAAAGCTGACCAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCGGCAGTAGAATCGCTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFGSRIA*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGCGATTCTACTGCC...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394126.5
CDS-3UTR TCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGCGGCCAGCTTTGAGGTaGAAGAAATGGAGCGCACAA +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWRPALR*KKWSAQ
Trigger: TTGTGCGCTCCATTTCTTTCACCTCAAAGCTGGCCG...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394127.6
CDS-3UTR GCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTCGCTCCTTCCAGGCTTaGAAAATGGCTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCRSFQA*KMACFR
Trigger: CCTGAAGCAAGCCATTTTGCAAGCCTGGAAGGAGCG...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGGGTGCCCTCGGCACAGTCCGATaGATTCCTCTGCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: HLLRMHRQHRGDAPNEGALGTVR*IPLLCR
Trigger: ACGGCAAAGCAGAGGAATGCATCGGACTGTGCCGAG...GGCACCCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACAGGCACATGGCAAGCTaGTTCTCCCCAGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNRHMAS*FSPAAG
Trigger: TCCAGCCGCTGGGGAGAAGCAGCTTGCCATGTGCCT...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGGGTGCCTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: HLLRMHRQHRGDAPNEGASSLAM*SRARFL
Trigger: CAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGA...GGCACCCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGAAGCCGGTCTTGTaGATCTGCTCCGCATGCACA +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTGKPVL*ICSACT
Trigger: TGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCC...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAGGGAAGCCGGTCTTGTaGATCTGCTCCGCATGCACA +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTGKPVL*ICSACT
Trigger: TGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCC...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGGGATATGCTGCATaGGCTTCACCATCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMWGYAA*ASPSSA
Trigger: AGCTGACGATGGTGAAGCGCATGCAGCATATCCCCA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAGGGGTGGGGATATGCTaGATGCGCTTCACCATCGTC +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGGVGIC*MRFTIV
Trigger: GACGATGGTGAAGCGCATGCAGCATATCCCCACCCC...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCAGACAGAAGCCCCTaGTTGCCACATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TVGSARRISWMLGWMLAFSDRSP*LPHSWS
Trigger: GCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGA...GAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR GCA 90 bp GCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCCGATTTCTGCTGGGGTaGGTGCTCTCGGTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: ARRISWMLGWMLAFSPDFRFLLG*VLSVRF
Trigger: AAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCG...GAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR GCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATTCTCTCCCGATTTCTaGTGGGGTGCGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTFSPDF*WGACSR
Trigger: CCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGTTCTCTCCCGATTTCTaGTGGGGTGCGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LSVRFALSHKVVDAGLRQFSPDF*WGACSR
Trigger: CCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAA...CTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCGCAAAGCGGACCGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR GCA 90 bp TTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTGTTGGCACCTCAGCTCCTGTaGGCGACTCGGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: FCWGACSRSALRLAIRLLAPQLL*ATRTES
Trigger: TGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGC...CAACAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGACAGGGTTCAGGATCTTaGCCTCCTCAGGCATGCAGG +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGQGSGS*PPQACR
Trigger: CCTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTG...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTTCATGCCACTTCATCTaGACTAGCTTCATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTSCHFI*TSFISE
Trigger: CTCGGAGATGAAGCTAGTGCAGATGAAGTGGCATGA...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAGCTGGCGGATCATCTaGAGCGACTTCTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHSWRII*SDFSRS
Trigger: TGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCT...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAGCACGTCGGCACACATaGGCTCCAGGATCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGARRHT*APGSSS
Trigger: TGAACTCGATCCTGGAGCGCATGTGTGCCGACGTGC...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCGCACGTCGGCACACATaGGCTCCAGGATCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASARRHT*APGSSS
Trigger: TGAACTCGATCCTGGAGCGCATGTGTGCCGACGTGC...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCTGCGTGGCTGTCTGCTaGAGCACGTCGGCACACATG +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFCVAVC*STSAHM
Trigger: CATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCA...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTTGCGTGGCTGTCTGCTaGAGCACGTCGGCACACATG +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPCVAVC*STSAHM
Trigger: CATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCA...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACATCTGCGTGGCTGTCTaGTGCAGCACGTCGGCACAC +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNICVAV*CSTSAH
Trigger: GTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGAT...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGATCTGCGTGGCTGTCTaGTGCAGCACGTCGGCACAC +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAICVAV*CSTSAH
Trigger: GTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGAT...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACGTAGAGCAGCTCCACTaGCCGCAGCGTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNVEQLH*PQRVLL
Trigger: AAGGAGCACACGCTGCGGGCAGTGGAGCTGCTCTAC...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCAACCAGGGTCACTTGCTaGATGTCCAGGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEATRVTC*MSRQKM
Trigger: CATCTTCTGCCTGGACATGCAGCAAGTGACCCTGGT...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGATCAACTTCGAAGGCTaGACATCGTCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMINFEG*TSSRGK
Trigger: CTTCCCCCTGGACGATGTGCAGCCTTCGAAGTTGAT...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGATCAACTTCGAAGGCTaGACATCGTCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWINFEG*TSSRGK
Trigger: CTTCCCCCTGGACGATGTGCAGCCTTCGAAGTTGAT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TCCCTTGTGGGAGGAGTAGGAACTGAGGGCACACCACACGGCCAGCTTGGCAAGATCAACTTCGAAGGCTaGACATCGTCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLVGGVGTEGTPHGQLGKINFEG*TSSRGK
Trigger: CTTCCCCCTGGACGATGTGCAGCCTTCGAAGTTGAT...CTTGCCAAGCTGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCCACAAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGGCTGAGAGGGAGCTaGTCATGGATCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGRLRGS*SWIGLW
Trigger: CCACAGACCGATCCATGAGCAGCTCCCTCTCAGCCT...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAAGGCTGAGAGGGAGCTaGTCATGGATCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTRLRGS*SWIGLW
Trigger: CCACAGACCGATCCATGAGCAGCTCCCTCTCAGCCT...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDAGCEAR*LIFPHC
Trigger: GCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCC...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDAMSSNA*THRSRE
Trigger: TTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACAT...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGAGGCCTCCTCTAGTTTaGCGATGTGCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRARPPLV*RCAAGP
Trigger: GGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCT...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGTCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRASRRGQ*GSRSCA
Trigger: TGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCCGCCTGTCAGGTTCATaGTGCCCTCGAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASRLSGS*CPRAGS
Trigger: TGATCCTGCTCGAGGGCACCATGAACCTGACAGGCG...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCTCACAGTTGCAGCGCTaGTCAGCTTTGTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSSQLQR*SALSNK
Trigger: CTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGA...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGCCCTGCCAGCTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCTGCTTGCCACATTCTTaGAGCAGGAAGTTTGTACAG +
Preference number: 4 (lower is better)
Translates to: GPASWRIICSDFSRSSSPCLPHS*SRKFVQ
Trigger: CTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCA...GGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCTGGATGTTGGGCTaGATGTTGGCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWSWMLG*MLAFSP
Trigger: GGGAGAGAATGCCAACATCCAGCCCAACATCCAGCT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACTTCATCTGCACTAGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGGGGCGGAAGCAGGGGTaGTCAGGGTTCAGGATCTTG +
Preference number: 4 (lower is better)
Translates to: HFICTSFISEELLSRATRGRKQG*SGFRIL
Trigger: CAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC...CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCTAGTGCAGATGAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCCAGCATCCGGACGTaGGCCACAAGCCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGEPSIRT*ATSQAT
Trigger: TGTGGCTTGGCTTGTGGCCCACGTCCGGATGCTGGG...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCCCTTCTCCAGCACCTTaGCAAAAATGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSPSPAP*QKCPSA
Trigger: TGCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGG...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGTCTTCTTCTGGCGGGTaGACGCCTGTCCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRASSSGG*TPVPCG
Trigger: CCCACAAGGGACAGGCGTCCACCCGCCAGAAGAAGA...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTCATGGATCGGTCTGTaGGGCTCGAAAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMSWIGL*GSKGCW
Trigger: CCAACATCCTTTCGAGCCCCACAGACCGATCCATGA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCTCATGGATCGGTCTGTaGGGCTCGAAAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: WAPPGGSAGCWAGCWHSLSWIGL*GSKGCW
Trigger: CCAACATCCTTTCGAGCCCCACAGACCGATCCATGA...GAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCAGAGGGAGCTGCTCATaGATCGGTCTGTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFRGSCS*IGLWGS
Trigger: CGAGCCCCACAGACCGATCCATGAGCAGCTCCCTCT...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATGGCCAGAACCACCTTaGGGCTGGACATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTWPEPP*GWTWLT
Trigger: TGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAGTTGGCTGTAGAGAGTaGGGGGAGAGTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGVGCRE*GESDRR
Trigger: CCTCCTGTCACTCTCCCCCCACTCTCTACAGCCAAC...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491466.5
3UTR CAA 72 bp TGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTGTaGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCA +
Preference number: 4 (lower is better)
Translates to: CSRSALRLAIRL*TLASDRSPCLP
Trigger: TGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp GCGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCTCAGGTAGGACAAGATaGGAGGATTGGGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: ALSHKVVDAGLRQKPLLASGRTR*EDWGMV
Trigger: GACCATCCCCCAATCCTCTCATCTTGTCCTACCTGA...GGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp CTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGGTTTTCTCCAGGCGCTaGAGGCACATGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: LVHLLRMHRQHRGDAPNEVFSRR*RHMASC
Trigger: GCAGCTTGCCATGTGCCTTCAGCGCCTGGAGAAAAC...CTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR TCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCCTCGGGAGACTCAATaGGCCCCACGAAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAPRETQ*APRSKL
Trigger: AAGCTTGCTTCGTGGGGCTCATTGAGTCTCCCGAGG...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTCAGCAGTCCCTCCGGTaGCTTAGAGTGGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: ALAPCGADVRHDASSFLTQQSLR*LRVVCI
Trigger: GATGCAGACCACTCTAAGTCACCGGAGGGACTGCTG...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCAGCAGTCCCTCCGGTaGCTTAGAGTGGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNQQSLR*LRVVCI
Trigger: GATGCAGACCACTCTAAGTCACCGGAGGGACTGCTG...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTCAGCAGTCCCTCCGGTaGCTTAGAGTGGTCTGCATC +
Preference number: 4 (lower is better)
Translates to: AIRLLTLASDRSPCLPHSQQSLR*LRVVCI
Trigger: GATGCAGACCACTCTAAGTCACCGGAGGGACTGCTG...AGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp CAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCCACATGGCACAGCATaGGGAAGGAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: QWAPPGGSAGCWAGCWHSPHGTA*GRRCQT
Trigger: TGTTTGACATCTCCTTCCTCATGCTGTGCCATGTGG...AGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCGGACAGAATCACCTCTaGACCATAGGTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASGQNHL*TIGLGH
Trigger: GTGGCCCAGACCTATGGTTCAGAGGTGATTCTGTCC...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCCCAGGATCGAGTTCATaGTCACCACCCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDAPGSSS*SPPSHC
Trigger: ACAATGAGAGGGTGGTGATCATGAACTCGATCCTGG...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAACTTGGAGGAGTCAGTaGGCAGGCCAGGTAGGATGT +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGTWRSQ*AGQVGC
Trigger: ACATCCTACCTGGCCTGCTCACTGACTCCTCCAAGT...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCCCAGGGGGAAGAGGCTaGTATAATCCTCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: GVRSGELEAARGSCTMWSPGGRG*YNPQCL
Trigger: AAGACATTGAGGATTATATCAGCCTCTTCCCCCTGG...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTTTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: ALAPCGADVRHDASSFLTFTIVS*STRDCV
Trigger: GACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACTCAGACAGAAGCCCCTaGTTGCCACATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHSDRSP*LPHSWS
Trigger: GCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGA...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGTTCTGCTGGGGTGCGTaGTCTCGGTCCGCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: NFERRNRETSWRSGVRSGFCWGA*SRSALR
Trigger: GCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAA...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGTTCTCTCCCGATTTCTaGTGGGGTGCGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAFSPDF*WGACSR
Trigger: CCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAA...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCTCATGCCACTTCATCTaGACTAGCTTCATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: AWTVGKPVLCICSACTDSSCHFI*TSFISE
Trigger: CTCGGAGATGAAGCTAGTGCAGATGAAGTGGCATGA...GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAAGCTGGCGGATCATCTaGAGCGACTTCTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTSWRII*SDFSRS
Trigger: TGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCT...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATATCTGCGTGGCTGTCTaGTGCAGCACGTCGGCACAC +
Preference number: 4 (lower is better)
Translates to: LAIRLLTLASDRSPCLPHICVAV*CSTSAH
Trigger: GTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGAT...ATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGGACCAGGGTCACTTaGTGCATGTCCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGRTRVT*CMSRQK
Trigger: CTTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCT...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCAGGACCAGGGTCACTTaGTGCATGTCCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ARRISWMLGWMLAFSPDFRTRVT*CMSRQK
Trigger: CTTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCT...GAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTCCTCCATGAACCACTaGACGAACTGGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNSSMNH*TNWVWG
Trigger: CCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGA...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACCAAGCCCCTCAGAGTaGAGCAATGGCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLAIRLLTLASDRSPCLPPSPSE*SNGFSS
Trigger: GCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGG...TGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCCCCCACTGCGGCCATaGCAAGCCCCTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGPPLRP*QAPQSA
Trigger: TGCACTCTGAGGGGCTTGGCATGGCCGCAGTGGGGG...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGGGTGCCAGTCCCTGGGATGTGTaGAATGAGGCCTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: HLLRMHRQHRGDAPNEGASPWDV*NEASSS
Trigger: ACTAGAGGAGGCCTCATTGCACACATCCCAGGGACT...GGCACCCTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp TGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCTCCGATGCATTCCTCTaGTTTGCCGTGACAGCTTAC +
Preference number: 4 (lower is better)
Translates to: WAPPGGSAGCWAGCWHSLSDAFL*FAVTAY
Trigger: GTAAGCTGTCACGGCAAAGCAGAGGAATGCATCGGA...GAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGTTCACTCTGAGCAGGTaGCAGCGGTGGCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGFTLSR*QRWRPA
Trigger: CGCTGGCCGCCACCGCTGCCACCTGCTCAGAGTGAA...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356271.7
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGGGATGGTCCAATCATaGCCTGCTCTAGTAACGCAT +
Preference number: 4 (lower is better)
Translates to: LEAARGSCTMWSGCEARCGMVQS*PALVTH
Trigger: ATGCGTTACTAGAGCAGGCCATGATTGGACCATCCC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGGGGATGGTCCAATCATaGCCTGCTCTAGTAACGCAT +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWGMVQS*PALVTH
Trigger: ATGCGTTACTAGAGCAGGCCATGATTGGACCATCCC...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAGAGAGGATTGGGGGATaGTCCAATCATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTERIGG*SNHGLL
Trigger: GAGCAGGCCATGATTGGACCATCCCCCAATCCTCTC...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GATGTTGGCATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGAGAGGATTGGGGGATaGTCCAATCATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: DVGILSRFLLGCVLSVRFERIGG*SNHGLL
Trigger: GAGCAGGCCATGATTGGACCATCCCCCAATCCTCTC...AAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAATGCCAACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp TTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTGTTGGAGAGGATTGGGGGATaGTCCAATCATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FCWGACSRSALRLAIRLLERIGG*SNHGLL
Trigger: GAGCAGGCCATGATTGGACCATCCCCCAATCCTCTC...CAACAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCAAGAGAGAATGCTCGATaGCAGTCCAAGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GELEAARGSCTMWSGCEARENAR*QSKKRP
Trigger: AGGCCTCTTCTTGGACTGCCATCGAGCATTCTCTCT...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTAGAGAGAATGCTCGATaGCAGTCCAAGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: QWAPPGGSAGCWAGCWHSRENAR*QSKKRP
Trigger: AGGCCTCTTCTTGGACTGCCATCGAGCATTCTCTCT...AGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GAACTCCTCGATTTTGGCACTCCCTCCGGCACACGAAACCACACAGGAAGGCTTCGCCTGTCAGGTTCATaGTGCCCTCGAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: ELLDFGTPSGTRNHTGRLRLSGS*CPRAGS
Trigger: TGATCCTGCTCGAGGGCACCATGAACCTGACAGGCG...AAGCCTTCCTGTGTGGTTTCGTGTGCCGGAGGGAGTGCCAAAATCGAGGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CCA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTTGCTTGCCACATTCTTaGAGCAGGAAGTTTGTACAG +
Preference number: 4 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTCLPHS*SRKFVQ
Trigger: CTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCA...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAATCTCCCGATTTCTGCTaGGGTGCGTGCTCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGESPDFC*GACSRS
Trigger: GGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGA...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTTGGGCTGGATGTTaGCATTCTCTCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: GGQESGAGNWKPLEALAPCWAGC*HSLPIS
Trigger: AGAAATCGGGAGAGAATGCCAACATCCAGCCCAACA...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAARRIS*MLGWML
Trigger: CAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ATGTGGCCCAGGACTCCCAGCAGTCCCTCCGGTGACTTAGAGTGGTCTGCATCCTCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTG +
Preference number: 4 (lower is better)
Translates to: MWPRTPSSPSGDLEWSASSGDLE*SASIVL
Trigger: CAAGACGATGGATGCAGACCACTCTAAGTCACCGGA...GGATGCAGACCACTCTAAGTCACCGGAGGGACTGCTGGGAGTCCTGGGCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp TTCAAATTGATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGGCGGCGGGGACTCCACTTTGGTaGAGTCGGGGCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: FKLMNFRAKDFSFPVAAAGTPLW*SRGGSR
Trigger: CCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTCCC...CGCCGCCGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCATCAATTTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATGCAGTTATCAGTGATTTTCTaGATGGACTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GRKQGWSGFRILPSSGMQLSVIF*MDSKAR
Trigger: CCTGGCCTTCGAGTCCATCCAGAAAATCACTGATAA...CTGCATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCCCTTCTCCAGCACCTTaGCAAAAATGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDAPSPAP*QKCPSA
Trigger: TGCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGG...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGCGGTGTCTCTTCTTCTaGCGGGTGGACGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NFERRNRETSWRSGVRSGRCLFF*RVDACP
Trigger: GGGACAGGCGTCCACCCGCCAGAAGAAGAGACACCG...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAAAGAGGGAGCTGCTCATaGATCGGTCTGTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGERGSCS*IGLWGS
Trigger: CGAGCCCCACAGACCGATCCATGAGCAGCTCCCTCT...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTGGCAGTCCAAGAAGCTaGCAGAGGGAAGGAAGTACA +
Preference number: 4 (lower is better)
Translates to: EAGLVHLLRMHRQHRGDAGSPRS*QREGST
Trigger: TGTACTTCCTTCCCTCTGCCAGCTTCTTGGACTGCC...AGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR TCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATTCATTATTTCACTCTaGGCAGGTGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTFIISL*AGGSGG
Trigger: GCCACCGCTGCCACCTGCTCAGAGTGAAATAATGAA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGTGGCTTGCTTCAGGTTaGCCACCTTCATTATTTCAC +
Preference number: 4 (lower is better)
Translates to: SRRGQWGSRSCASAPHAQWLASG*PPSLFH
Trigger: GTGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCA...CTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACACGCATCTGCCAGGTTaGGAATATCCCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNTHLPG*EYPRWL
Trigger: GAGCCACCTGGGATATTCTCAACCTGGCAGATGCGT...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGATCAGGTAGGACAAGATaGGAGGATTGGGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGSGRTR*EDWGMV
Trigger: GACCATCCCCCAATCCTCTCATCTTGTCCTACCTGA...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTGGACAGAATCACCTCTaGACCATAGGTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPGQNHL*TIGLGH
Trigger: GTGGCCCAGACCTATGGTTCAGAGGTGATTCTGTCC...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACACATTCTCCCAGGCATTaGGGATTTCCAAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTHSPRH*GFPRWR
Trigger: CCGCCATCTTGGAAATCCTCAATGCCTGGGAGAATG...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGGACTCCACTTTGGTGCATTCTCCCAGGCATTaGGGATTTCCAAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: SFISEELLSRATRDSTLVHSPRH*GFPRWR
Trigger: CCGCCATCTTGGAAATCCTCAATGCCTGGGAGAATG...CACCAAAGTGGAGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR TCA 90 bp GATCTCTCCAAGTTTCAAGAGAGAATGCTCGATGGCAGTCCAAGAAGCTGGCAGCCAGTGGCTGTTGGTTaGTTGGCTCGGGTGCCACCC +
Preference number: 4 (lower is better)
Translates to: DLSKFQERMLDGSPRSWQPVAVG*LARVPP
Trigger: GGGTGGCACCCGAGCCAATCAACCAACAGCCACTGG...CTGCCAGCTTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACTTGGAGAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGCTTGCAAAATGGCTTaGTTCAGGTTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: RSGELEAARGSCTMWSGCACKMA*FRLTTF
Trigger: GAAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGC...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCATGATGTCCAGCAATaGCTGGACACACAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFHDVQQ*LDTQVP
Trigger: CGGGACCTGTGTGTCCAGGCATTGCTGGACATCATG...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp GCGCTGGTCAGCTTTGTCCAACAAGGGGGTGAGCTTCAGCAGGAACTCAAAAGCCTCGGCACAGTCCGATaGATTCCTCTGCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: ALVSFVQQGGELQQELKSLGTVR*IPLLCR
Trigger: ACGGCAAAGCAGAGGAATGCATCGGACTGTGCCGAG...GCTTTTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACAAAGCTGACCAGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTCTGCAGAGGCTGCCGTaGAGCGCAGCAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPLQRLP*SAAASG
Trigger: TCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAG...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAAGGGAAGCCGGTCTTGTaGATCTGCTCCGCATGCACA +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGEGKPVL*ICSACT
Trigger: TGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCC...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CCCTCCGGTGACTTAGAGTGGTCTGCATCCATCGTCTTGAGGATGTTTGTGACATGCTCCACCAGGGACTaGGTCTCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PSGDLEWSASIVLRMFVTCSTRD*VSPVRF
Trigger: GAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCA...TGTCACAAACATCCTCAAGACGATGGATGCAGACCACTCTAAGTCACCGGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp CAGTCACAGTTGCAGCGCTGGTCAGCTTTGTCCAACAAGGGGGTGAGCTTCAGCTGGGGATATGCTGCATaGGCTTCACCATCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: QSQLQRWSALSNKGVSFSWGYAA*ASPSSA
Trigger: AGCTGACGATGGTGAAGCGCATGCAGCATATCCCCA...GCTGAAGCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGAGTGGGGTGGGGATATaGTGCATGCGCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRASGVGI*CMRFTI
Trigger: GATGGTGAAGCGCATGCAGCATATCCCCACCCCACT...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CACTTCATCTGCACTAGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGAGTGGGGTGGGGATATaGTGCATGCGCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: HFICTSFISEELLSRATRSGVGI*CMRFTI
Trigger: GATGGTGAAGCGCATGCAGCATATCCCCACCCCACT...CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCTAGTGCAGATGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATCAGACAGAAGCCCCTaGTTGCCACATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTSDRSP*LPHSWS
Trigger: GCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCACTAAACAGTGGCCCTaGCAGCTGGCGGATCATCTG +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFTKQWP*QLADHL
Trigger: CAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGT...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: ALAPCGADVRHDASSFLTLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTMSSNA*THRSRE
Trigger: TTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACAT...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACGCCTGTCAGGTTCATaGTGCCCTCGAGCAGGATCA +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGERLSGS*CPRAGS
Trigger: TGATCCTGCTCGAGGGCACCATGAACCTGACAGGCG...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGGAAGTTTGTACAGTCACAGTTGCAGCGCTGGTCAGCTTTGTCCAACAAGGGTCTCCCGATTTCTGCTaGGGTGCGTGCTCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: QEVCTVTVAALVSFVQQGSPDFC*GACSRS
Trigger: GGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGA...CCCTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAACTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTGTTGGGCTGGATGTTaGCATTCTCTCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDACWAGC*HSLPIS
Trigger: AGAAATCGGGAGAGAATGCCAACATCCAGCCCAACA...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTGTTGGGCTGGATGTTaGCATTCTCTCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: TVGSARRISWMLGWMLAFCWAGC*HSLPIS
Trigger: AGAAATCGGGAGAGAATGCCAACATCCAGCCCAACA...GAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp ATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGGCGGCGGCAGCCAGCTGTTGGGCTGGATGTTaGCATTCTCTCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: MNFRAKDFSFPVAAAAASCWAGC*HSLPIS
Trigger: AGAAATCGGGAGAGAATGCCAACATCCAGCCCAACA...GCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp GCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCAGCTGGATGTTGGGCTaGATGTTGGCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ARRISWMLGWMLAFSPDFSWMLG*MLAFSP
Trigger: GGGAGAGAATGCCAACATCCAGCCCAACATCCAGCT...GAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCCCAGGGACTCCACTTTaGTGGAGTCGGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSPGTPL*WSRGGS
Trigger: GCTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGG...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCCCCAGCATCCGGACGTaGGCCACAAGCCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSPSIRT*ATSQAT
Trigger: TGTGGCTTGGCTTGTGGCCCACGTCCGGATGCTGGG...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTTGTCAAAGATGTGGATaGAGCGGCTGTCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: ALAPCGADVRHDASSFLTCQRCG*SGCPPS
Trigger: GCTGGGTGGACAGCCGCTCCATCCACATCTTTGACA...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCAGGCCAGGTAGGATGTaGCCCAGCAGGACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSRPGRM*PSRTRV
Trigger: GACCCTGGTCCTGCTGGGCCACATCCTACCTGGCCT...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGTGTCTCTTCTTCTaGCGGGTGGACGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGRCLFF*RVDACP
Trigger: GGGACAGGCGTCCACCCGCCAGAAGAAGAGACACCG...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGCGGTGTCTCTTCTTCTaGCGGGTGGACGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRRCLFF*RVDACP
Trigger: GGGACAGGCGTCCACCCGCCAGAAGAAGAGACACCG...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACATCATGGATCGGTCTGTaGGGCTCGAAAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTSWIGL*GSKGCW
Trigger: CCAACATCCTTTCGAGCCCCACAGACCGATCCATGA...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAATGGCCAGAACCACCTTaGGGCTGGACATGGCTGACA +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGEWPEPP*GWTWLT
Trigger: TGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCA...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAATCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGESGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: HKPSHSTHRQTAYLPFDVNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...AACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
3UTR CAA 72 bp TGCCACTTCATCTGCACTAGCTTCATCTCCGAGGAGTaGTTGAGCAGGGCCACCAGGGACTCCACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CHFICTSFISEE*LSRATRDSTLV
Trigger: CACCAAAGTGGAGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCTAGTGCAGATGAAGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR TCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTTTCATTATTTCACTCTaGGCAGGTGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPFIISL*AGGSGG
Trigger: GCCACCGCTGCCACCTGCTCAGAGTGAAATAATGAA...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCTCTCCGAGGAGTTGTTaGGCAGGGCCACCAGGGACT +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSSPRSC*AGPPGT
Trigger: AGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGA...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGTGGCGGCTGAGATGCTaGGACAGGCCTCATGCCACT +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGWRLRC*DRPHAT
Trigger: AGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCA...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAAGTTCGAGACTAGCCTaGCCAACATGGAGAAACCTC +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTSSRLA*PTWRNL
Trigger: GAGGTTTCTCCATGTTGGTCAGGCTAGTCTCGAACT...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394126.5
CDS-3UTR TCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTTCCATGAGAGTGGGTaGGGTCACACTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNFHESG*GHTLGE
Trigger: TTCTCCCAGAGTGTGACCTCACCCACTCTCATGGAA...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491466.5
CDS-3UTR GCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCGCTCCTTCCAGGCTTaGAAAATGGCTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNRSFQA*KMACFR
Trigger: CCTGAAGCAAGCCATTTTGCAAGCCTGGAAGGAGCG...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGTCCGATGCATTCCTCTaGTTTGCCGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRASDAFL*FAVTAQ
Trigger: CTGAGCTGTCACGGCAAAGCAGAGGAATGCATCGGA...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGGGAAGCCGGTCTTGTaGATCTGCTCCGCATGCACA +
Preference number: 4 (lower is better)
Translates to: NFERRNRETSWRSGVRSGGKPVL*ICSACT
Trigger: TGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCC...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CCCTCCGGTGACTTAGAGTGGTCTGCATCCATCGTCTTGAGGATGTTTGTGACATTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: PSGDLEWSASIVLRMFVTFTIVS*STRDCV
Trigger: GACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA...TGTCACAAACATCCTCAAGACGATGGATGCAGACCACTCTAAGTCACCGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGTCAGACAGAAGCCCCTaGTTGCCACATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRASDRSP*LPHSWS
Trigger: GCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGA...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTTTCTGCTGGGGTGCGTaGTCTCGGTCCGCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPFCWGA*SRSALR
Trigger: GCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAA...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCATTCTGCTGGGGTGCGTaGTCTCGGTCCGCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESFCWGA*SRSALR
Trigger: GCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAA...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTCAGGCATGCAGGTCTaGATCCAGGTCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNSGMQV*IQVSKK
Trigger: CTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGA...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCTCAGGCATGCAGGTCTaGATCCAGGTCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFSGMQV*IQVSKK
Trigger: CTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGA...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTCAAATTGATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGGCGGCGTGCCCTCCTCAGGCATaGAGGTCTGCATCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FKLMNFRAKDFSFPVAAACPPQA*RSASRS
Trigger: AGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCA...CGCCGCCGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCATCAATTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAAAGCTGGCGGATCATCTaGAGCGACTTCTCACGCTCA +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGESWRII*SDFSRS
Trigger: TGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCT...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTATCAGTGGCACGTCGGCACACATaGGCTCCAGGATCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: QATAHTARLHTFPLMLSVARRHT*APGSSS
Trigger: TGAACTCGATCCTGGAGCGCATGTGTGCCGACGTGC...CACTGATAACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACATCAACTTCGAAGGCTaGACATCGTCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNINFEG*TSSRGK
Trigger: CTTCCCCCTGGACGATGTGCAGCCTTCGAAGTTGAT...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNGCEAR*LIFPHC
Trigger: GCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCC...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTGGATGTGAGGCACGATaGCTCATCTTTCCTCACTGC +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPGCEAR*LIFPHC
Trigger: GCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCC...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNMSSNA*THRSRE
Trigger: TTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACAT...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp GGGTGGGCACCTAGAGCTGGAAACCCCAGAGACCATTCCCAAAAGCCTGATTTCATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: GWAPRAGNPRDHSQKPDFMSSNA*THRSRE
Trigger: TTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACAT...GAAATCAGGCTTTTGGGAATGGTCTCTGGGGTTTCCAGCTCTAGGTGCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGACTTCTCCCCAGCGGCTaGAGTGCCGGCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRLLPSG*SAGLQP
Trigger: GGGCTGGAGGCCGGCACTCCAGCCGCTGGGGAGAAG...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGAGGCCTCCTCTAGTTTaGCGATGTGCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGRPPLV*RCAAGP
Trigger: GGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCT...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGAGAGAATGCTCGATaGCAGTCCAAGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGRENAR*QSKKRP
Trigger: AGGCCTCTTCTTGGACTGCCATCGAGCATTCTCTCT...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHSRITA*TVGKPV
Trigger: GACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCCTTCACCAAAACCTGTaGAATCTTGAGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HRGDHWACGPGCSLSSGALHQNL*NLEESE
Trigger: TTCACTTTCCTCAAGATTCCACAGGTTTTGGTGAAG...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGCTTGCCACATTCTTaGAGCAGGAAGTTTGTACAG +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMCLPHS*SRKFVQ
Trigger: CTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTTGCCACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGCTGGTCGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: LATFLEQEVCTVTVAALVARRIS*MLGWML
Trigger: CAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC...GACCAGCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp TTCAAATTGATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGGCGGCGGGACGGAGGCCGGTTTaGTGCTTTCTTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FKLMNFRAKDFSFPVAAAGRRPV*CFLRCH
Trigger: ATGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCC...CGCCGCCGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCATCAATTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGGGACTCCACTTTGGTaGAGTCGGGGCGGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRGTPLW*SRGGSR
Trigger: CCTGCTTCCGCCCCGACTCCACCAAAGTGGAGTCCC...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCAGGGACTCCACTTTaGTGGAGTCGGGGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHPGTPL*WSRGGS
Trigger: GCTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGG...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTTATCAGTGATTTTCTaGATGGACTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: WKPLEALAPCGADVRHDALSVIF*MDSKAR
Trigger: CCTGGCCTTCGAGTCCATCCAGAAAATCACTGATAA...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTCCCAGCATCCGGACGTaGGCCACAAGCCAAGCCACA +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPPSIRT*ATSQAT
Trigger: TGTGGCTTGGCTTGTGGCCCACGTCCGGATGCTGGG...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCCCTTCTCCAGCACCTTaGCAAAAATGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASPSPAP*QKCPSA
Trigger: TGCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGG...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACACCTTCTCCAGCACCTTaGCAAAAATGTCCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTPSPAP*QKCPSA
Trigger: TGCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGG...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTTGTCAAAGATGTGGATaGAGCGGCTGTCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: HKPSHSTHRQTAYLPFDVCQRCG*SGCPPS
Trigger: GCTGGGTGGACAGCCGCTCCATCCACATCTTTGACA...AACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATAGGCCAGGTAGGATGTaGCCCAGCAGGACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHRPGRM*PSRTRV
Trigger: GACCCTGGTCCTGCTGGGCCACATCCTACCTGGCCT...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTAGGCCAGGTAGGATGTaGCCCAGCAGGACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPRPGRM*PSRTRV
Trigger: GACCCTGGTCCTGCTGGGCCACATCCTACCTGGCCT...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACGGTGTCTCTTCTTCTaGCGGGTGGACGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESRCLFF*RVDACP
Trigger: GGGACAGGCGTCCACCCGCCAGAAGAAGAGACACCG...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGAGAGGGAGCTGCTCATaGATCGGTCTGTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRRGSCS*IGLWGS
Trigger: CGAGCCCCACAGACCGATCCATGAGCAGCTCCCTCT...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGAGAGGGAGCTGCTCATaGATCGGTCTGTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGRGSCS*IGLWGS
Trigger: CGAGCCCCACAGACCGATCCATGAGCAGCTCCCTCT...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGNHCTN*VWGPAV
Trigger: CACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTT...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATTTCACTCTGAGCAGGTaGCAGCGGTGGCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHFTLSR*QRWRPA
Trigger: AGCTGGCCGCCACCGCTGCCACCTGCTCAGAGTGAA...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394126.5
ENST00000394127.6
CDS-3UTR TCA 90 bp GTTTGTACAGTCACAGTTGCAGCGCTGGTCAGCTTTGTCCAACAAGGGGGTGAGTTCATTATTTCACTCTaGGCAGGTGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: VCTVTVAALVSFVQQGGEFIISL*AGGSGG
Trigger: GCCACCGCTGCCACCTGCTCAGAGTGAAATAATGAA...CTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp ATCCGGACGTGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCAGAATTTCTTCATGTTaGTTGCCCATTGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: IRTWATSQATAHTARLHTRISSC*LPIGSH
Trigger: GTGACTACCAATGGGCAATCAACATGAAGAAATTCT...GGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCCGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp CACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTTCAGGTAGGACAAGATaGGAGGATTGGGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: HKPSHSTHRQTAYLPFDVSGRTR*EDWGMV
Trigger: GACCATCCCCCAATCCTCTCATCTTGTCCTACCTGA...AACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGGTTTTCTCCAGGCGCTaGAGGCACATGGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRVFSRR*RHMASC
Trigger: GCAGCTTGCCATGTGCCTTCAGCGCCTGGAGAAAAC...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGAAGTCCTTGTCTCCATaGGAGTACTTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: GKPVLCICSACTDSIVGMKSLSP*EYFFNF
Trigger: GAAGTTGAAGAAGTACTCTCATGGAGACAAGGACTT...CATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTCCACATGGCACAGCATaGGGAAGGAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: ALAPCGADVRHDASSFLTPHGTA*GRRCQT
Trigger: TGTTTGACATCTCCTTCCTCATGCTGTGCCATGTGG...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGACTTGGAGGAGTCAGTaGGCAGGCCAGGTAGGATGT +
Preference number: 4 (lower is better)
Translates to: NFERRNRETSWRSGVRSGTWRSQ*AGQVGC
Trigger: ACATCCTACCTGGCCTGCTCACTGACTCCTCCAAGT...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGCCACACACTCCTCCATaGACCACTGCACGAACTGGG +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRPHTPP*TTARTG
Trigger: CCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGTGG...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGAGGCACATGGCAAGCTaGTTCTCCCCAGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRRHMAS*FSPAAG
Trigger: TCCAGCCGCTGGGGAGAAGCAGCTTGCCATGTGCCT...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGAGTTTCAAGAGAGAATaGTCGATGGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RSGVRSGELEAARGSCTMSFKRE*SMAVQE
Trigger: TTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACT...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AATGAGGGTGCCACACTGCTCGGCCTGACTCCGGAGCTGCGGGTTGCTGAGATTAGTTTCAAGAGAGAATaGTCGATGGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: NEGATLLGLTPELRVAEISFKRE*SMAVQE
Trigger: TTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACT...AATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR GCA 90 bp ACACGAAACCACACAGGAAGGCTTCCCCTGAGGACAACAGGGAGGGAGGGGCCTAGTTTCAAGAGAGAATaGTCGATGGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TRNHTGRLPLRTTGREGPSFKRE*SMAVQE
Trigger: TTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACT...AGGCCCCTCCCTCCCTGTTGTCCTCAGGGGAAGCCTTCCTGTGTGGTTTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp CAGGATCTCTCCAAGTTTCAAGAGAGAATGCTCGATGGCAGTCCAAGAAGCTGGCTGTCAGGTTCATGGTaGCCTCGAGCAGGATCACGG +
Preference number: 4 (lower is better)
Translates to: QDLSKFQERMLDGSPRSWLSGSW*PRAGSR
Trigger: CCGTGATCCTGCTCGAGGGCACCATGAACCTGACAG...CCAGCTTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACTTGGAGAGATCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR GCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTTCACCATCGTCAGCTaGTCCACCAGGGACTGCGTC +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRFTIVS*STRDCV
Trigger: GACGCAGTCCCTGGTGGAGCAGCTGACGATGGTGAA...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGGGGGTGGGGATATGCTaGATGCGCTTCACCATCGTC +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGGVGIC*MRFTIV
Trigger: GACGATGGTGAAGCGCATGCAGCATATCCCCACCCC...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAATCAGGCATGCAGGTCTaGATCCAGGTCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGESGMQV*IQVSKK
Trigger: CTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGA...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCTGCCCTCCTCAGGCATaGAGGTCTGCATCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSCPPQA*RSASRS
Trigger: AGACCTGGATGCAGACCTGCATGCCTGAGGAGGGCA...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGATCATGCCACTTCATCTaGACTAGCTTCATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGSCHFI*TSFISE
Trigger: CTCGGAGATGAAGCTAGTGCAGATGAAGTGGCATGA...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGTGCGTGGCTGTCTGCTaGAGCACGTCGGCACACATG +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRCVAVC*STSAHM
Trigger: CATGTGTGCCGACGTGCTGCAGCAGACAGCCACGCA...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGATCTGCGTGGCTGTCTaGTGCAGCACGTCGGCACAC +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQEICVAV*CSTSAH
Trigger: GTGTGCCGACGTGCTGCAGCAGACAGCCACGCAGAT...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAAATCAACTTCGAAGGCTaGACATCGTCCAGGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGEINFEG*TSSRGK
Trigger: CTTCCCCCTGGACGATGTGCAGCCTTCGAAGTTGAT...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGGCTTGTGGTCCAGGCTaGTCACTCTCCTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQEACGPG*SLSSGA
Trigger: GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGC...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAAGGCCTCCTCTAGTTTaGCGATGTGCAGCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESRPPLV*RCAAGP
Trigger: GGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCT...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTTCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGSRRGQ*GSRSCA
Trigger: TGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCTCCAGGACAAAAAGTaGGGTGGGGATATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: FASRKFLRGKTTPGLGRALQDKK*GGDMLH
Trigger: ATGCAGCATATCCCCACCCCACTTTTTGTCCTGGAG...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTCTCCAGGACAAAAAGTaGGGTGGGGATATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: AIRLLTLASDRSPCLPHSLQDKK*GGDMLH
Trigger: ATGCAGCATATCCCCACCCCACTTTTTGTCCTGGAG...AGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCTCACAGTTGCAGCGCTaGTCAGCTTTGTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFSQLQR*SALSNK
Trigger: CTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGA...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTGAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGCTTGCCACATTCTTaGAGCAGGAAGTTTGTACAG +
Preference number: 4 (lower is better)
Translates to: LRMFVTVGSARRISWMLGCLPHS*SRKFVQ
Trigger: CTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCA...GCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCATCTCCCGATTTCTGCTaGGGTGCGTGCTCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESSPDFC*GACSRS
Trigger: GGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGA...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTATTTCAGCTTTCCAGTaGCGGCGGCGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPISAFQ*RRRQPA
Trigger: TGCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAAT...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGATTTCAGCTTTCCAGTaGCGGCGGCGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQEISAFQ*RRRQPA
Trigger: TGCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAAT...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGAGGGTGTCAAAGATGTaGATGGAGCGGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: NFERRNRETSWRSGVRSGRVSKM*MERLST
Trigger: GGTGGACAGCCGCTCCATCCACATCTTTGACACCCT...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATTCTTCTTCTGGCGGGTaGACGCCTGTCCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHSSSGG*TPVPCG
Trigger: CCCACAAGGGACAGGCGTCCACCCGCCAGAAGAAGA...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCTCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRNRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATGGTTCTTGGTGCTGCTaGGGGTTTTCTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHGSWCC*GFSPGA
Trigger: AGCGCCTGGAGAAAACCCTCAGCAGCACCAAGAACC...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACCTCGGGAGACTCAATaGGCCCCACGAAGCAAGCTT +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESPRETQ*APRSKL
Trigger: AAGCTTGCTTCGTGGGGCTCATTGAGTCTCCCGAGG...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCACATGGCACAGCATaGGGAAGGAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGEPHGTA*GRRCQT
Trigger: TGTTTGACATCTCCTTCCTCATGCTGTGCCATGTGG...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTTCCAAGATGGCGGCTaGGATGCTGAGACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQEFQDGG*DAETGL
Trigger: GAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAA...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGCGGTGGAGGGAAACTTaGTCTGCGTGGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRRWRET*SAWLSA
Trigger: AGCAGACAGCCACGCAGATCAAGTTTCCCTCCACCG...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCCAGGGGGAAGAGGCTaGTATAATCCTCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFPGGRG*YNPQCL
Trigger: AAGACATTGAGGATTATATCAGCCTCTTCCCCCTGG...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGACTCAATGAGCCCCACGAAGCAAGCTTTCCAGATCTCCAGGACAAAAAGTCATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: GDSMSPTKQAFQISRTKSHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...ACTTTTTGTCCTGGAGATCTGGAAAGCTTGCTTCGTGGGGCTCATTGAGTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGTTTCTTCATGTTGATTaGCCATTGGTAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWFLHVD*PLVVTP
Trigger: TGGAGTGACTACCAATGGGCAATCAACATGAAGAAA...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGTTTCTTCATGTTGATTaGCCATTGGTAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: EDVCDSGLRPEDQLDVGLFLHVD*PLVVTP
Trigger: TGGAGTGACTACCAATGGGCAATCAACATGAAGAAA...CAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCCATGATGTCCAGCAATaGCTGGACACACAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSHDVQQ*LDTQVP
Trigger: CGGGACCTGTGTGTCCAGGCATTGCTGGACATCATG...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGACTGCAGAGGCTGCCGTaGAGCGCAGCAGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRLQRLP*SAAASG
Trigger: TCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAG...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTTGCATCTGCTCCGCATaGACAGACAGCATCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGCICSA*TDSIVG
Trigger: CCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCA...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATTGCATCTGCTCCGCATaGACAGACAGCATCGTGGGG +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHCICSA*TDSIVG
Trigger: CCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCA...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACTGTCAGGTTCATGGTaGCCTCGAGCAGGATCACGG +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESLSGSW*PRAGSR
Trigger: CCGTGATCCTGCTCGAGGGCACCATGAACCTGACAG...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGCTGTCAGGTTCATGGTaGCCTCGAGCAGGATCACGG +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRLSGSW*PRAGSR
Trigger: CCGTGATCCTGCTCGAGGGCACCATGAACCTGACAG...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTCGATTTCTGCTGGGGTaGGTGCTCTCGGTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPRFLLG*VLSVRF
Trigger: AAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCG...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACGATTTCTGCTGGGGTaGGTGCTCTCGGTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESRFLLG*VLSVRF
Trigger: AAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCG...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGCGATTTCTGCTGGGGTaGGTGCTCTCGGTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRRFLLG*VLSVRF
Trigger: AAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCG...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATTTCTCTCCCGATTTCTaGTGGGGTGCGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHFSPDF*WGACSR
Trigger: CCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAA...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTGCACCTCAGCTCCTGTaGGCGACTCGGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGAPQLL*ATRTES
Trigger: TGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGC...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGACTAAACAGTGGCCCTaGCAGCTGGCGGATCATCTG +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRTKQWP*QLADHL
Trigger: CAGATGATCCGCCAGCTGGCAGGGCCACTGTTTAGT...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGGAGGGAAACTTGATCTaGGTGGCTGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWREGNLI*VAVCCS
Trigger: GCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTC...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGACCAGGGTCACTTGCTaGATGTCCAGGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: NFERRNRETSWRSGVRSGTRVTC*MSRQKM
Trigger: CATCTTCTGCCTGGACATGCAGCAAGTGACCCTGGT...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGTCCTCCATGAACCACTaGACGAACTGGGTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRSSMNH*TNWVWG
Trigger: CCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGA...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGCCAAGCCCCTCAGAGTaGAGCAATGGCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRPSPSE*SNGFSS
Trigger: GCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGG...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCCCCCACTGCGGCCATaGCAAGCCCCTCAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLPPLRP*QAPQSA
Trigger: TGCACTCTGAGGGGCTTGGCATGGCCGCAGTGGGGG...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATGCCGCTAGAGGCTCTTaGACCATGTGGAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHAARGS*TMWSGC
Trigger: ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGC...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCAGCAGGTGGCAGCGGTaGCGGCCAGCGCACAATCCA +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLSRWQR*RPAHNP
Trigger: TGGATTGTGCGCTGGCCGCCACCGCTGCCACCTGCT...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356271.7
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGGAGAGGATTGGGGGATaGTCCAATCATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRERIGG*SNHGLL
Trigger: GAGCAGGCCATGATTGGACCATCCCCCAATCCTCTC...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTCCAGGACAAAAAGTaGGGTGGGGATATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGELQDKK*GGDMLH
Trigger: ATGCAGCATATCCCCACCCCACTTTTTGTCCTGGAG...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGCTTCACCAAAACCTGTaGAATCTTGAGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: SGVRSGELEAARGSCTMWLHQNL*NLEESE
Trigger: TTCACTTTCCTCAAGATTCCACAGGTTTTGGTGAAG...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTG +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQEARRIS*MLGWML
Trigger: CAACATCCAGCCCAACATCCAGCTGATCCTCCGGGC...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAATCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTG +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGESGDLE*SASIVL
Trigger: CAAGACGATGGATGCAGACCACTCTAAGTCACCGGA...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGACGGAGGCCGGTTTaGTGCTTTCTTCGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESGRRPV*CFLRCH
Trigger: ATGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCC...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCTTATCAGTGATTTTCTaGATGGACTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASLSVIF*MDSKAR
Trigger: CCTGGCCTTCGAGTCCATCCAGAAAATCACTGATAA...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGGTTCTCACTAAACAGTaGCCCTGCCAGCTGGCGGAT +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRVLTKQ*PCQLAD
Trigger: ATCCGCCAGCTGGCAGGGCCACTGTTTAGTGAGAAC...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCACCACACGGCCAGCTTaGCAAGAGCAGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLTTRPA*QEQCPG
Trigger: CCCCGGGCACTGCTCTTGCCAAGCTGGCCGTGTGGT...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGTCATGGATCGGTCTGTaGGGCTCGAAAGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: NFERRNRETSWRSGVRSGSWIGL*GSKGCW
Trigger: CCAACATCCTTTCGAGCCCCACAGACCGATCCATGA...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCATGCACGAACTGGGTGTaGGGGCCAGCGGTGCGAGAC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSCTNWV*GPAVRD
Trigger: GTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTGGCTCTTGCACCATGTaGAGCGGATGTGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGGSCTM*SGCEAR
Trigger: TCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCC...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGAACCGGGAGACATCCTaGAGGTCAGGAGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQENRETS*RSGVRS
Trigger: GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTT...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GGCCAGGATCTCTCCAAGTTTCAAGAGAGAATGCTCGATGGCAGTCCAAGAAGCGAGGCCAGAATCCAGTaGCTGTTGGTTGATTGGCTC +
Preference number: 4 (lower is better)
Translates to: GQDLSKFQERMLDGSPRSEARIQ*LLVDWL
Trigger: GAGCCAATCAACCAACAGCCACTGGATTCTGGCCTC...GCTTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACTTGGAGAGATCCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR TCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGCTTGCTTCAGGTTaGCCACCTTCATTATTTCAC +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNWLASG*PPSLFH
Trigger: GTGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCA...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTACGCATCTGCCAGGTTaGGAATATCCCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGTHLPG*EYPRWL
Trigger: GAGCCACCTGGGATATTCTCAACCTGGCAGATGCGT...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAACGCATCTGCCAGGTTaGGAATATCCCAGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESTHLPG*EYPRWL
Trigger: GAGCCACCTGGGATATTCTCAACCTGGCAGATGCGT...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGTCAGGTAGGACAAGATaGGAGGATTGGGGGATGGTC +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGSGRTR*EDWGMV
Trigger: GACCATCCCCCAATCCTCTCATCTTGTCCTACCTGA...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAAAGTCCTTGTCTCCATaGGAGTACTTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTKSLSP*EYFFNF
Trigger: GAAGTTGAAGAAGTACTCTCATGGAGACAAGGACTT...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCAAGTCCTTGTCTCCATaGGAGTACTTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASKSLSP*EYFFNF
Trigger: GAAGTTGAAGAAGTACTCTCATGGAGACAAGGACTT...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CAGTCACAGTTGCAGCGCTGGTCAGCTTTGTCCAACAAGGGGGTGAGCTTCAGCAAGTCCTTGTCTCCATaGGAGTACTTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: QSQLQRWSALSNKGVSFSKSLSP*EYFFNF
Trigger: GAAGTTGAAGAAGTACTCTCATGGAGACAAGGACTT...GCTGAAGCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGCATTCTCCCAGGCATTaGGGATTTCCAAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRHSPRH*GFPRWR
Trigger: CCGCCATCTTGGAAATCCTCAATGCCTGGGAGAATG...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTATCAGTGCCAGGATCGAGTTCATaGTCACCACCCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: QATAHTARLHTFPLMLSVPGSSS*SPPSHC
Trigger: ACAATGAGAGGGTGGTGATCATGAACTCGATCCTGG...CACTGATAACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAACTTGGAGGAGTCAGTaGGCAGGCCAGGTAGGATGT +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESTWRSQ*AGQVGC
Trigger: ACATCCTACCTGGCCTGCTCACTGACTCCTCCAAGT...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGGGAGGAGTAGGAACTaGGGGCACACCACACGGCCA +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLGRSRN*GHTTRP
Trigger: TGGCCGTGTGGTGTGCCCTCAGTTCCTACTCCTCCC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGGTCCCGCATGTTaGCCGTGTGGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSEGPAC*PCGAER
Trigger: CCTCTCAGCTCCACACGGTCAACATGCGGGACCCTC...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGTGGCGGCCAGCTTTaGGGTGAAAGAAATGGAGCT +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESGGGQL*GERNGA
Trigger: AGCTCCATTTCTTTCACCTCAAAGCTGGCCGCCACC...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394126.5
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTCATGATGTCCAGCAATaGCTGGACACACAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPHDVQQ*LDTQVP
Trigger: CGGGACCTGTGTGTCCAGGCATTGCTGGACATCATG...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCATGATGTCCAGCAATaGCTGGACACACAGGTCCCG +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGHDVQQ*LDTQVP
Trigger: CGGGACCTGTGTGTCCAGGCATTGCTGGACATCATG...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCTCGGCACAGTCCGATaGATTCCTCTGCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHLGTVR*IPLLCR
Trigger: ACGGCAAAGCAGAGGAATGCATCGGACTGTGCCGAG...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCAGTTTCAAGAGAGAATaGTCGATGGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: APCGADVRHDASSFLTASSFKRE*SMAVQE
Trigger: TTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACT...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGCTTCAGCAGGAACTCAAAAGCACAGTTGACATCCTCAGTGAAGTCCTTGTCTGGGGTGGGGATATGCTaGATGCGCTTCACCATCGTC +
Preference number: 4 (lower is better)
Translates to: SFSRNSKAQLTSSVKSLSGVGIC*MRFTIV
Trigger: GACGATGGTGAAGCGCATGCAGCATATCCCCACCCC...AGACAAGGACTTCACTGAGGATGTCAACTGTGCTTTTGAGTTCCTGCTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTAGTGGGGTGGGGATATaGTGCATGCGCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGSGVGI*CMRFTI
Trigger: GATGGTGAAGCGCATGCAGCATATCCCCACCCCACT...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AATTCATTCAAATTGATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGTTCTGCTGGGGTGCGTaGTCTCGGTCCGCTTTGCGC +
Preference number: 4 (lower is better)
Translates to: NSFKLMNFRAKDFSFPVAFCWGA*SRSALR
Trigger: GCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAA...CGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCATCAATTTGAATGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR GCA 90 bp GTTCATGATCACCACCCTCTCATTGTAGAACTGCAGGGTGTTCTCACTAAACAGGCACCTCAGCTCCTGTaGGCGACTCGGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: VHDHHPLIVELQGVLTKQAPQLL*ATRTES
Trigger: TGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGC...CTGTTTAGTGAGAACACCCTGCAGTTCTACAATGAGAGGGTGGTGATCATGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR GCA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAATCATGCCACTTCATCTaGACTAGCTTCATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: FERRNRETSWRSGVRSGESCHFI*TSFISE
Trigger: CTCGGAGATGAAGCTAGTGCAGATGAAGTGGCATGA...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTTCATGCCACTTCATCTaGACTAGCTTCATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: HKPSHSTHRQTAYLPFDVSCHFI*TSFISE
Trigger: CTCGGAGATGAAGCTAGTGCAGATGAAGTGGCATGA...AACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGAGGGAAACTTGATCTaGGTGGCTGTCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPEGNLI*VAVCCS
Trigger: GCTGCAGCAGACAGCCACGCAGATCAAGTTTCCCTC...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAACTGCCCGCAGCGTGTaGTCCTTCCGCGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRTARSV*SFRVSF
Trigger: GAAGGAGACGCGGAAGGAGCACACGCTGCGGGCAGT...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTAGGACCAGGGTCACTTaGTGCATGTCCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPRTRVT*CMSRQK
Trigger: CTTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCT...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGCCAAGCCCCTCAGAGTaGAGCAATGGCTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRPSPSE*SNGFSS
Trigger: GCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGG...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGAGAGGATTGGGGGATaGTCCAATCATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPERIGG*SNHGLL
Trigger: GAGCAGGCCATGATTGGACCATCCCCCAATCCTCTC...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGAGAGGATTGGGGGATaGTCCAATCATGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESERIGG*SNHGLL
Trigger: GAGCAGGCCATGATTGGACCATCCCCCAATCCTCTC...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCAGCAGGATCACGGCGTaGACAGTGGGGAAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLSRITA*TVGKPV
Trigger: GACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCT...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTGCTTGCCACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGCTTCACAGTTGCAGCGCTaGTCAGCTTTGTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: PACHILGAGSLYSHSCSASQLQR*SALSNK
Trigger: CTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGA...AGCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCAGCTGGATGTTGGGCTaGATGTTGGCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSSWMLG*MLAFSP
Trigger: GGGAGAGAATGCCAACATCCAGCCCAACATCCAGCT...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CTTGCCACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGCTGGTCGGATCAGCTGGATGTTaGGCTGGATGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: LATFLEQEVCTVTVAALVGSAGC*AGCWHS
Trigger: AGAATGCCAACATCCAGCCCAACATCCAGCTGATCC...GACCAGCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCATGTCAAAGATGTGGATaGAGCGGCTGTCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESCQRCG*SGCPPS
Trigger: GCTGGGTGGACAGCCGCTCCATCCACATCTTTGACA...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCACGGTGTCTCTTCTTCTaGCGGGTGGACGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSRCLFF*RVDACP
Trigger: GGGACAGGCGTCCACCCGCCAGAAGAAGAGACACCG...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGAAACCACTGCACGAACTaGGTGTGGGGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRNHCTN*VWGPAV
Trigger: CACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTT...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATGAACCACCTTGGGGCTaGACATGGCTGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHEPPWG*TWLTPS
Trigger: TGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTC...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGGAACCACCTTGGGGCTaGACATGGCTGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQEEPPWG*TWLTPS
Trigger: TGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTC...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTGAACCACCTTGGGGCTaGACATGGCTGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGEPPWG*TWLTPS
Trigger: TGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTC...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
3UTR CAA 72 bp AAGTTTGTACAGTCACAGTTGCAGCGCTGGTCAGCTTaGTCCAACAAGGGGGTGAGCTTCAGCAGGAACTCA +
Preference number: 4 (lower is better)
Translates to: KFVQSQLQRWSA*SNKGVSFSRNS
Trigger: TGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCATTCATTATTTCACTCTaGGCAGGTGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESFIISL*AGGSGG
Trigger: GCCACCGCTGCCACCTGCTCAGAGTGAAATAATGAA...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCAAGTCCTTGTCTCCATaGGAGTACTTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: LEALAPCGADVRHDASSFKSLSP*EYFFNF
Trigger: GAAGTTGAAGAAGTACTCTCATGGAGACAAGGACTT...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTGTCCAACAAGGGGGTaGGCTTCAGCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQECPTRG*ASAGTQ
Trigger: TTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACA...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCATGTCCAACAAGGGGGTaGGCTTCAGCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESCPTRG*ASAGTQ
Trigger: TTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACA...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGCATTCTCCCAGGCATTaGGGATTTCCAAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRHSPRH*GFPRWR
Trigger: CCGCCATCTTGGAAATCCTCAATGCCTGGGAGAATG...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCATTCTCCCAGGCATTaGGGATTTCCAAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGHSPRH*GFPRWR
Trigger: CCGCCATCTTGGAAATCCTCAATGCCTGGGAGAATG...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCCAGGATCGAGTTCATaGTCACCACCCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGPGSSS*SPPSHC
Trigger: ACAATGAGAGGGTGGTGATCATGAACTCGATCCTGG...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCCCAGGATCGAGTTCATaGTCACCACCCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSPGSSS*SPPSHC
Trigger: ACAATGAGAGGGTGGTGATCATGAACTCGATCCTGG...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGCCAGGATCGAGTTCATaGTCACCACCCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: ASRWRGNFERRNRETSWRPGSSS*SPPSHC
Trigger: ACAATGAGAGGGTGGTGATCATGAACTCGATCCTGG...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGA +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLGAGHG*HLHQFR
Trigger: TCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACGCTCCTTCCAGGCTTaGAAAATGGCTTGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESRSFQA*KMACFR
Trigger: CCTGAAGCAAGCCATTTTGCAAGCCTGGAAGGAGCG...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATTTCTTCATGTTGATTaGCCATTGGTAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTFLHVD*PLVVTP
Trigger: TGGAGTGACTACCAATGGGCAATCAACATGAAGAAA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACATTTCTTCATGTTGATTaGCCATTGGTAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTFLHVD*PLVVTP
Trigger: TGGAGTGACTACCAATGGGCAATCAACATGAAGAAA...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCCGATGCATTCCTCTaGTTTGCCGTGACAGCTCAG +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQESDAFL*FAVTAQ
Trigger: CTGAGCTGTCACGGCAAAGCAGAGGAATGCATCGGA...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGATGCTCCACCAGGGACTaGGTCTCGCCTGTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRCSTRD*VSPVRF
Trigger: GAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCA...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCATGGGGATATGCTGCATaGGCTTCACCATCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESWGYAA*ASPSSA
Trigger: AGCTGACGATGGTGAAGCGCATGCAGCATATCCCCA...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGTAGAGCAGCTCCACTaGCCGCAGCGTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLVEQLH*PQRVLL
Trigger: AAGGAGCACACGCTGCGGGCAGTGGAGCTGCTCTAC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAACCAGGGTCACTTGCTaGATGTCCAGGCAGAAGATG +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESTRVTC*MSRQKM
Trigger: CATCTTCTGCCTGGACATGCAGCAAGTGACCCTGGT...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp AGTGAAGTCCTTGTCTCCATGAGAGTACTTCTTCAACTTCACCAAAACCTGTGGAGGCTGAGAGGGAGCTaGTCATGGATCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SEVLVSMRVLLQLHQNLWRLRGS*SWIGLW
Trigger: CCACAGACCGATCCATGAGCAGCTCCCTCTCAGCCT...CCACAGGTTTTGGTGAAGTTGAAGAAGTACTCTCATGGAGACAAGGACTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRVKGMN*RTLPRP
Trigger: TGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCAC...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHMSSNA*THRSRE
Trigger: TTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACAT...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGCGCTGAAGGCACATaGCAAGCTGCTTCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRGAEGT*QAASPQ
Trigger: CTGGGGAGAAGCAGCTTGCCATGTGCCTTCAGCGCC...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATGGACAAAAAGTGGGGTaGGGATATGCTGCATGCGCT +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHGQKVG*GYAACA
Trigger: AGCGCATGCAGCATATCCCCACCCCACTTTTTGTCC...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTGGACAAAAAGTGGGGTaGGGATATGCTGCATGCGCT +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGGQKVG*GYAACA
Trigger: AGCGCATGCAGCATATCCCCACCCCACTTTTTGTCC...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGACTTCACCAAAACCTGTaGAATCTTGAGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: KKKPGDILEVRSQERGTGLHQNL*NLEESE
Trigger: TTCACTTTCCTCAAGATTCCACAGGTTTTGGTGAAG...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGATCTCCCGATTTCTGCTaGGGTGCGTGCTCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRSPDFC*GACSRS
Trigger: GGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGA...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTAGCTGGATGTTGGGCTaGATGTTGGCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPSWMLG*MLAFSP
Trigger: GGGAGAGAATGCCAACATCCAGCCCAACATCCAGCT...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGAGCTGGATGTTGGGCTaGATGTTGGCATTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRSWMLG*MLAFSP
Trigger: GGGAGAGAATGCCAACATCCAGCCCAACATCCAGCT...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACAGAAGCCCCTGCTTGCCACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTGGATCAGCTGGATGTTaGGCTGGATGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: TEAPACHILGAGSLYSHSGSAGC*AGCWHS
Trigger: AGAATGCCAACATCCAGCCCAACATCCAGCTGATCC...ACTGTGACTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAATTTCAGCTTTCCAGTaGCGGCGGCGGCAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRISAFQ*RRRQPA
Trigger: TGCTGGCTGCCGCCGCCGCCACTGGAAAGCTGAAAT...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACCCTCACTGCTTCCCTTaGAGGCGCCTGGGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHPHCFP*RRLGLR
Trigger: GCGCAGCCCCAGGCGCCTCCAAGGGAAGCAGTGAGG...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
CDS-3UTR CCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACAGACTACTCCTGGGCTaGGGCGGGCGCACACAGGGG +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHRLLLG*GGRTQG
Trigger: CCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCT...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
CDS-3UTR TCA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACAGAATTTCTTCATGTTaGTTGCCCATTGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: LKEETGRHPGGQESGAGNRISSC*LPIGSH
Trigger: GTGACTACCAATGGGCAATCAACATGAAGAAATTCT...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTAGAATTTCTTCATGTTaGTTGCCCATTGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPRISSC*LPIGSH
Trigger: GTGACTACCAATGGGCAATCAACATGAAGAAATTCT...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACCACATGGCACAGCATaGGGAAGGAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESPHGTA*GRRCQT
Trigger: TGTTTGACATCTCCTTCCTCATGCTGTGCCATGTGG...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCCAGGATCGAGTTCATaGTCACCACCCTCTCATTGT +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGPGSSS*SPPSHC
Trigger: ACAATGAGAGGGTGGTGATCATGAACTCGATCCTGG...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCGGTGGAGGGAAACTTaGTCTGCGTGGCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLRWRET*SAWLSA
Trigger: AGCAGACAGCCACGCAGATCAAGTTTCCCTCCACCG...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCCAGGGGGAAGAGGCTaGTATAATCCTCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGPGGRG*YNPQCL
Trigger: AAGACATTGAGGATTATATCAGCCTCTTCCCCCTGG...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGACCGGTCTTGTGCATCTaGTCCGCATGCACAGACAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRPVLCI*SACTDS
Trigger: GCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGG...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCATTCTCTCCCGATTTCTaGTGGGGTGCGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSFSPDF*WGACSR
Trigger: CCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAA...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGCACCTCAGCTCCTGTaGGCGACTCGGACAGAATCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSAPQLL*ATRTES
Trigger: TGATTCTGTCCGAGTCGCGCACAGGAGCTGAGGTGC...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGCACGTCGGCACACATaGGCTCCAGGATCGAGTTCA +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRARRHT*APGSSS
Trigger: TGAACTCGATCCTGGAGCGCATGTGTGCCGACGTGC...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGCTCCAGGACAAAAAGTaGGGTGGGGATATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQELQDKK*GGDMLH
Trigger: ATGCAGCATATCCCCACCCCACTTTTTGTCCTGGAG...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCTCCAGGACAAAAAGTaGGGTGGGGATATGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PQVPADGEEILKEETGRHLQDKK*GGDMLH
Trigger: ATGCAGCATATCCCCACCCCACTTTTTGTCCTGGAG...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACAGTTGCAGCGCTaGTCAGCTTTGTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQESQLQR*SALSNK
Trigger: CTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGA...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGATCAGCTGGATGTTaGGCTGGATGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPGSAGC*AGCWHS
Trigger: AGAATGCCAACATCCAGCCCAACATCCAGCTGATCC...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGGATCAGCTGGATGTTaGGCTGGATGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRGSAGC*AGCWHS
Trigger: AGAATGCCAACATCCAGCCCAACATCCAGCTGATCC...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTTCCGGTGACTTAGAGTaGTCTGCATCCATCGTCTTG +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGSGDLE*SASIVL
Trigger: CAAGACGATGGATGCAGACCACTCTAAGTCACCGGA...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACACCACACGGCCAGCTTaGCAAGAGCAGTGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHTTRPA*QEQCPG
Trigger: CCCCGGGCACTGCTCTTGCCAAGCTGGCCGTGTGGT...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCTCAGGAGCGGGGAACTaGAAGCCGCTAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLSGAGN*KPLEAL
Trigger: AAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGA...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGCCCTTCCTTAAACTaGGGCACTAAGAAAGTATCG +
Preference number: 4 (lower is better)
Translates to: THFASRKFLRGKTTPGLGRPSLN*GTKKVS
Trigger: CGATACTTTCTTAGTGCCCCAGTTTAAGGAAGGGCG...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394126.5
CDS-3UTR TCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCTGGCTTGCTTCAGGTTaGCCACCTTCATTATTTCAC +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSWLASG*PPSLFH
Trigger: GTGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCA...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGGACAGAATCACCTCTaGACCATAGGTCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLGQNHL*TIGLGH
Trigger: GTGGCCCAGACCTATGGTTCAGAGGTGATTCTGTCC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCACTTGGAGGAGTCAGTaGGCAGGCCAGGTAGGATGT +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLTWRSQ*AGQVGC
Trigger: ACATCCTACCTGGCCTGCTCACTGACTCCTCCAAGT...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCACCAGGGGGAAGAGGCTaGTATAATCCTCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESPGGRG*YNPQCL
Trigger: AAGACATTGAGGATTATATCAGCCTCTTCCCCCTGG...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR TCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCACATGTGGAGCGGATGTaGGGCACGATGCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSHVERM*GTMPHL
Trigger: AAGATGAGGCATCGTGCCTCACATCCGCTCCACATG...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCACTCGGCACAGTCCGATaGATTCCTCTGCTTTGCCGT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSLGTVR*IPLLCR
Trigger: ACGGCAAAGCAGAGGAATGCATCGGACTGTGCCGAG...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGATCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRSSLAM*SRARFL
Trigger: CAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGA...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTG +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLSSLAM*SRARFL
Trigger: CAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGA...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCATGCCACTTCATCTaGACTAGCTTCATCTCCGAG +
Preference number: 4 (lower is better)
Translates to: DGEEILKEETGRHPGGQESCHFI*TSFISE
Trigger: CTCGGAGATGAAGCTAGTGCAGATGAAGTGGCATGA...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGCTGGTCAGCTTTTGCATTCCTCTGCTTTaGCGTGACAGCTTACTGATG +
Preference number: 4 (lower is better)
Translates to: TFLEQEVCTVTVAALVSFCIPLL*RDSLLM
Trigger: CATCAGTAAGCTGTCACGGCAAAGCAGAGGAATGCA...AAAGCTGACCAGCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCATGTTGGGCTGGATGTTaGCATTCTCTCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: GEEILKEETGRHPGGQESCWAGC*HSLPIS
Trigger: AGAAATCGGGAGAGAATGCCAACATCCAGCCCAACA...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp GGAGACTCAATGAGCCCCACGAAGCAAGCTTTCCAGATCTCCAGGACAAAAAGTTTATCAGTGATTTTCTaGATGGACTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GDSMSPTKQAFQISRTKSLSVIF*MDSKAR
Trigger: CCTGGCCTTCGAGTCCATCCAGAAAATCACTGATAA...ACTTTTTGTCCTGGAGATCTGGAAAGCTTGCTTCGTGGGGCTCATTGAGTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR TCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTTGGCTTGCTTCAGGTTaGCCACCTTCATTATTTCAC +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGWLASG*PPSLFH
Trigger: GTGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCA...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGATGTCCAACAAGGGGGTaGGCTTCAGCAGGAACTCAA +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRCPTRG*ASAGTQ
Trigger: TTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACA...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACTGGCGGCTGAGATGCTaGGACAGGCCTCATGCCACT +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHWRLRC*DRPHAT
Trigger: AGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCA...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR TCA 90 bp AATTCATTCAAATTGATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGCATTCTCCCAGGCATTaGGGATTTCCAAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: NSFKLMNFRAKDFSFPVAHSPRH*GFPRWR
Trigger: CCGCCATCTTGGAAATCCTCAATGCCTGGGAGAATG...CGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCATCAATTTGAATGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR GCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCATCAGACAGAAGCCCCTaGTTGCCACATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSSDRSP*LPHSWS
Trigger: GCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGA...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACGTAGAGCAGCTCCACTaGCCGCAGCGTGTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHVEQLH*PQRVLL
Trigger: AAGGAGCACACGCTGCGGGCAGTGGAGCTGCTCTAC...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACTCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCA +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHSRRGQ*GSRSCA
Trigger: TGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp CCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTTTATCAGTGATTTTCTaGATGGACTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PADGEEILKEETGRHPGGLSVIF*MDSKAR
Trigger: CCTGGCCTTCGAGTCCATCCAGAAAATCACTGATAA...ACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACTCTTCTTCTGGCGGGTaGACGCCTGTCCCTTGTGGG +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHSSSGG*TPVPCG
Trigger: CCCACAAGGGACAGGCGTCCACCCGCCAGAAGAAGA...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR TCA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCAGAATTTCTTCATGTTaGTTGCCCATTGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: GNFERRNRETSWRSGVRSRISSC*LPIGSH
Trigger: GTGACTACCAATGGGCAATCAACATGAAGAAATTCT...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACCACATGGCACAGCATaGGGAAGGAGATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRPHGTA*GRRCQT
Trigger: TGTTTGACATCTCCTTCCTCATGCTGTGCCATGTGG...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGAGTTTCAAGAGAGAATaGTCGATGGCAGTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLSSGASRWRGNFERRNRSFKRE*SMAVQE
Trigger: TTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACT...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACAGGCTGAGAGGGAGCTaGTCATGGATCGGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHRLRGS*SWIGLW
Trigger: CCACAGACCGATCCATGAGCAGCTCCCTCTCAGCCT...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGGGATGGTCCAATCATaGCCTGCTCTAGTAACGCAT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSGMVQS*PALVTH
Trigger: ATGCGTTACTAGAGCAGGCCATGATTGGACCATCCC...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAAGAGAGAATGCTCGATaGCAGTCCAAGAAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: THTHTHTHTHFASRKFLRRENAR*QSKKRP
Trigger: AGGCCTCTTCTTGGACTGCCATCGAGCATTCTCTCT...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCATCACAGTTGCAGCGCTaGTCAGCTTTGTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: THTHTHTHIHTLHLESSSSQLQR*SALSNK
Trigger: CTTGTTGGACAAAGCTGACCAGCGCTGCAACTGTGA...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGGATCAGCTGGATGTTaGGCTGGATGTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLGSAGC*AGCWHS
Trigger: AGAATGCCAACATCCAGCCCAACATCCAGCTGATCC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTAGAATTTCTTCATGTTaGTTGCCCATTGGTAGTCAC +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPRISSC*LPIGSH
Trigger: GTGACTACCAATGGGCAATCAACATGAAGAAATTCT...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCCAGGGGGAAGAGGCTaGTATAATCCTCAATGTCTT +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLPGGRG*YNPQCL
Trigger: AAGACATTGAGGATTATATCAGCCTCTTCCCCCTGG...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR GCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGAGCTTGCAAAATGGCTTaGTTCAGGTTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRACKMA*FRLTTF
Trigger: GAAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGC...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACAGTGGGGTGGGGATATaGTGCATGCGCTTCACCATC +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHSGVGI*CMRFTI
Trigger: GATGGTGAAGCGCATGCAGCATATCCCCACCCCACT...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACCTCATCTTTCCTCACTaGTTCCCTTGGAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHLIFPH*FPWRRL
Trigger: CAGGCGCCTCCAAGGGAAGCAGTGAGGAAAGATGAG...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
CDS-3UTR CCA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTCTTCACCAAAACCTGTaGAATCTTGAGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: QVPADGEEILKEETGRHPLHQNL*NLEESE
Trigger: TTCACTTTCCTCAAGATTCCACAGGTTTTGGTGAAG...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGATGTTGGGCTGGATGTTaGCATTCTCTCCCGATTTCT +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRCWAGC*HSLPIS
Trigger: AGAAATCGGGAGAGAATGCCAACATCCAGCCCAACA...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACAGGGTGTCAAAGATGTaGATGGAGCGGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHRVSKM*MERLST
Trigger: GGTGGACAGCCGCTCCATCCACATCTTTGACACCCT...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACTCAGGCATGCAGGTCTaGATCCAGGTCTCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHSGMQV*IQVSKK
Trigger: CTTCTTCGAGACCTGGATGCAGACCTGCATGCCTGA...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACGGACAAAAAGTGGGGTaGGGATATGCTGCATGCGCT +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHGQKVG*GYAACA
Trigger: AGCGCATGCAGCATATCCCCACCCCACTTTTTGTCC...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCTGCTTGCCACATTCTTaGAGCAGGAAGTTTGTACAG +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLCLPHS*SRKFVQ
Trigger: CTGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCA...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCTTATCAGTGATTTTCTaGATGGACTCGAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLLSVIF*MDSKAR
Trigger: CCTGGCCTTCGAGTCCATCCAGAAAATCACTGATAA...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR TCA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCAAGTCCTTGTCTCCATaGGAGTACTTCTTCAACTTC +
Preference number: 4 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLKSLSP*EYFFNF
Trigger: GAAGTTGAAGAAGTACTCTCATGGAGACAAGGACTT...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR GCA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACGCTTGCAAAATGGCTTaGTTCAGGTTGACCACCTTC +
Preference number: 4 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHACKMA*FRLTTF
Trigger: GAAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGC...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR GCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGATTTCTTCATGTTGATTaGCCATTGGTAGTCACTCCA +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRFLHVD*PLVVTP
Trigger: TGGAGTGACTACCAATGGGCAATCAACATGAAGAAA...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CCA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTTCACCAAAACCTGTaGAATCTTGAGGAAAGTGAA +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRLHQNL*NLEESE
Trigger: TTCACTTTCCTCAAGATTCCACAGGTTTTGGTGAAG...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS CCA 90 bp GCACCAGCCGAGTGGGGAGGGCGCGGCGCCTGCCAGCGCTGGACCTaGGGCTGCACTGTTTCCCGCCAGGCTGCTGCTCCAGCCCAGCCC +
Preference number: 5 (lower is better)
Translates to: APAEWGGRGACQRWT*GCTVSRQAAAPAQP
Trigger: GGGCTGGGCTGGAGCAGCAGCCTGGCGGGAAACAGTGCAGCCCCAGGTCCAGCGCTGGCAGGCGCCGCGCCCTCCCCACTCGGCTGGTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS GCA 90 bp CCCAGCGGCTGGAGTGCCGGCCTCCAGCCCCTCCCGCAGCCGCTCTaGAGAGGCTGCCGTGCAGCGCAGCAGCCAGTGGAGGGCGCTAAG +
Preference number: 5 (lower is better)
Translates to: PSGWSAGLQPLPQPL*RGCRAAQQPVEGAK
Trigger: CTTAGCGCCCTCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAGGGGCTGGAGGCCGGCACTCCAGCCGCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000428757.6
ENST00000479829.5
ENST00000501516.7
ENST00000535071.6
ENST00000535508.6
ENST00000543759.6
ENST00000580008.5
ENST00000580885.5
ENST00000585306.5
CDS GCA 90 bp GCCGAGTGGGGAGGGCGCGGCGCCTGCCAGCGCTGGACCTGGGGCTaGACTGTTTCCCGCCAGGCTGCTGCTCCAGCCCAGCCCAAAGAC +
Preference number: 5 (lower is better)
Translates to: AEWGGRGACQRWTWG*TVSRQAAAPAQPKD
Trigger: GTCTTTGGGCTGGGCTGGAGCAGCAGCCTGGCGGGAAACAGTGCAGCCCCAGGTCCAGCGCTGGCAGGCGCCGCGCCCTCCCCACTCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS GCA 90 bp TGGAGTGCCGGCCTCCAGCCCCTCCCGCAGCCGCTCTGCAGAGGCTaGCGTGCAGCGCAGCAGCCAGTGGAGGGCGCTAAGAAGGGCTCG +
Preference number: 5 (lower is better)
Translates to: WSAGLQPLPQPLCRG*RAAQQPVEGAKKGS
Trigger: CGAGCCCTTCTTAGCGCCCTCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGAGGGGCTGGAGGCCGGCACTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000428757.6
ENST00000479829.5
ENST00000501516.7
ENST00000535071.6
ENST00000535508.6
ENST00000543759.6
ENST00000580008.5
ENST00000580885.5
ENST00000585306.5
CDS TCA 90 bp GAAGTCAGCACAGGGGAGCAAGGAACGGGCTCAGGGAGCGGGTCTTaGCCCTGCCCCCACCGCCACCCTTGGAGTGGGCGCCCGGGCCAC +
Preference number: 5 (lower is better)
Translates to: EVSTGEQGTGSGSGS*PCPHRHPWSGRPGH
Trigger: GTGGCCCGGGCGCCCACTCCAAGGGTGGCGGTGGGGGCAGGGTCAAGACCCGCTCCCTGAGCCCGTTCCTTGCTCCCCTGTGCTGACTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CCA 90 bp TCCCGCAGCCGCTCTGCAGAGGCTGCCGTGCAGCGCAGCAGCCAGTaGAGGGCGCTAAGAAGGGCTCGGCACAGTCCGATGCATTCCTCT +
Preference number: 5 (lower is better)
Translates to: SRSRSAEAAVQRSSQ*RALRRARHSPMHSS
Trigger: AGAGGAATGCATCGGACTGTGCCGAGCCCTTCTTAGCGCCCTCCACTGGCTGCTGCGCTGCACGGCAGCCTCTGCAGAGCGGCTGCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000428757.6
ENST00000479829.5
ENST00000501516.7
ENST00000535071.6
ENST00000535508.6
ENST00000543759.6
ENST00000580008.5
ENST00000580885.5
ENST00000585306.5
CDS-3UTR CAA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAACCAGGGACTCCACTTaGGTGGAGTCGGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPTRDST*VESGRK
Trigger: CTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGGT...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS GCA 90 bp GGTGGCAGCGGTGGCGGCCAGCCTGAGCACTACATACTGCAGCCTTaGTCCCCAGGGTTCCGGCCAAACCTGATCACCGAGGAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GGSGGGQPEHYILQP*SPGFRPNLITEEVA
Trigger: TGCCACCTCCTCGGTGATCAGGTTTGGCCGGAACCCTGGGGAGCAAGGCTGCAGTATGTAGTGCTCAGGCTGGCCGCCACCGCTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585306.5
CDS-3UTR CAA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCACAGCGCTGGTCAGCTTaGTCCAACAAGGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPQRWSA*SNKGVS
Trigger: GCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTG...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGCCCTGCCAGCTGGCGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCACCAGGGACTCCACTTaGGTGGAGTCGGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GPASWRIICSDFSRSSSPTRDST*VESGRK
Trigger: CTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGGT...GGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCGCCAGCTGGCAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS GCA 90 bp AGGAGAGCCGGGAAGGTGGTACTCACGGTGGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCACCCTGCTCCAGGCAGTCCACACAC +
Preference number: 5 (lower is better)
Translates to: RRAGKVVLTVVKGMN*RTLPRPPCSRQSTH
Trigger: GTGTGTGGACTGCCTGGAGCAGGGTGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCACCACCGTGAGTACCACCTTCCCGGCTCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS GCA 90 bp ACCTTCACCAGTTCCGACACCTGCCACGGACAGACAGATGCTGCTTaGGGGACGGCTGGTGGTGGGTGTGCTGTCCCAGGGGGAAGGAGG +
Preference number: 5 (lower is better)
Translates to: TFTSSDTCHGQTDAA*GTAGGGCAVPGGRR
Trigger: CCTCCTTCCCCCTGGGACAGCACACCCACCACCAGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAGGTGTCGGAACTGGTGAAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS-3UTR CAA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGC +
Preference number: 5 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTVGKPV*CICSAC
Trigger: GCATGCGGAGCAGATGCACAAGACCGGCTTCCCCAC...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS GCA 90 bp ACCTTGGGGCTGGACATGGCTGACACCTTCACCAGTTCCGACACCTaGCACGGACAGACAGATGCTGCTTGCGGGACGGCTGGTGGTGGG +
Preference number: 5 (lower is better)
Translates to: TLGLDMADTFTSSDT*HGQTDAACGTAGGG
Trigger: CCCACCACCAGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAGGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS-3UTR CAA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGAGGCCTCCTCTAGTTaGGCGATGTGCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GVRSGELEAARGSCTMWSEASSS*AMCSRA
Trigger: GGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTC...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CGGCACACGAAACCACACAGGAAGGCTTCCCCTGAGGACAACAGGGAGGGAGGGGAGGCCTCCTCTAGTTaGGCGATGTGCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RHTKPHRKASPEDNREGGEASSS*AMCSRA
Trigger: GGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTC...CCCTCCCTCCCTGTTGTCCTCAGGGGAAGCCTTCCTGTGTGGTTTCGTGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CAA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCATGCGGGTTGCTGAGATaGGCCAGGATCTCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPCGLLR*ARISPS
Trigger: ACTTGGAGAGATCCTGGCCAATCTCAGCAACCCGCA...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGC +
Preference number: 5 (lower is better)
Translates to: HRQLLHQGLRLACQVHGAVGKPV*CICSAC
Trigger: GCATGCGGAGCAGATGCACAAGACCGGCTTCCCCAC...GGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR CAA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCAACCAGGGACTCCACTTaGGTGGAGTCGGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GGQESGAGNWKPLEALAPTRDST*VESGRK
Trigger: CTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGGT...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS TCA 90 bp TCGGTTCAGAGGGTCCCGCATGTTGACCGTGTGGAGCTGAGAGGCTaGGAGGGAGCTGCTCATGGATCGGTCTGCTGTGGGACGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SVQRVPHVDRVELRG*EGAAHGSVCCGTEQ
Trigger: CTGCTCCGTCCCACAGCAGACCGATCCATGAGCAGCTCCCTCTCAGCCTCTCAGCTCCACACGGTCAACATGCGGGACCCTCTGAACCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422942.6
ENST00000579364.1
CDS TCA 90 bp GCCAGGACTCGGTTCAGAGGGTCCCGCATGTTGACCGTGTGGAGCTaGGAGGCTGAGAGGGAGCTGCTCATGGATCGGTCTGCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: ARTRFRGSRMLTVWS*EAERELLMDRSAVG
Trigger: TCCCACAGCAGACCGATCCATGAGCAGCTCCCTCTCAGCCTCTCAGCTCCACACGGTCAACATGCGGGACCCTCTGAACCGAGTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422942.6
ENST00000579364.1
CDS TCA 90 bp ACCAGGACTCGGTTCAGAGGGTCCCGCATGTTGACCGTGTGGAGCTaGGAGGCTGAGAGGGAGCTGCTCATGGATCGGTCTGTGGGGCTC +
Preference number: 5 (lower is better)
Translates to: TRTRFRGSRMLTVWS*EAERELLMDRSVGL
Trigger: GAGCCCCACAGACCGATCCATGAGCAGCTCCCTCTCAGCCTCTCAGCTCCACACGGTCAACATGCGGGACCCTCTGAACCGAGTCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491466.5
CDS CCA 90 bp GAGAGGGAGCTGCTCATGGATCGGTCTGCTGTGGGACGGAGCAGATaGAGCGCTGGGAAACAGCCTGCCGAGTGCAAAAGTGGTGCTCCC +
Preference number: 5 (lower is better)
Translates to: ERELLMDRSAVGRSR*SAGKQPAECKSGAP
Trigger: GGGAGCACCACTTTTGCACTCGGCAGGCTGTTTCCCAGCGCTCCATCTGCTCCGTCCCACAGCAGACCGATCCATGAGCAGCTCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422942.6
ENST00000579364.1
CDS-3UTR CAA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCACATGTTGATTGCCCATaGGTAGTCACTCCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPHVDCP*VVTPAL
Trigger: GAGCGCTGGAGTGACTACCAATGGGCAATCAACATG...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CACCATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGC +
Preference number: 5 (lower is better)
Translates to: HHRQLLHQGLRLACQVHGVGKPV*CICSAC
Trigger: GCATGCGGAGCAGATGCACAAGACCGGCTTCCCCAC...ACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR CAA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCGTGAAAGCTGTCCACTaGAGCTCCTCCGTACCCTCG +
Preference number: 5 (lower is better)
Translates to: HRGDHWACGPGCSLSSGAVKAVH*SSSVPS
Trigger: CGAGGGTACGGAGGAGCTCAAGTGGACAGCTTTCAC...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCAACCAGGGACTCCACTTaGGTGGAGTCGGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: GELEAARGSCTMWSGCEATRDST*VESGRK
Trigger: CTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGGT...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCACCAGGGACTCCACTTaGGTGGAGTCGGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: LEAARGSCTMWSGCEARCTRDST*VESGRK
Trigger: CTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGGT...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGATGAGCAGGAACAGGTaGGCCAGGACTCGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGMSRNR*ARTRFR
Trigger: TCTGAACCGAGTCCTGGCCAACCTGTTCCTGCTCAT...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGATGAGCAGGAACAGGTaGGCCAGGACTCGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVMSRNR*ARTRFR
Trigger: TCTGAACCGAGTCCTGGCCAACCTGTTCCTGCTCAT...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS TCA 90 bp GCTGAGGTCCGTGATGGCCAGAACCACCTTGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGACACCTGCCACGGACAGACAGATGC +
Preference number: 5 (lower is better)
Translates to: AEVRDGQNHLGAGHG*HLHQFRHLPRTDRC
Trigger: GCATCTGTCTGTCCGTGGCAGGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCATCACGGACCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS TCA 90 bp GCCGGTCTTGTGCATCTCCTAATGAGGGTGCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTGCTGAGATTGGCCAGGATCTCTCCA +
Preference number: 5 (lower is better)
Translates to: AGLVHLLMRVPHCSA*LRSCGLLRLARISP
Trigger: TGGAGAGATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGATGCACAAGACCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585249.1
CDS GCA 90 bp GAGATGCTGAGACAGGCCTCATGCCACTTCATCTGCCTGCGGGTGTaGAGAGAAGTCAGCACAGGGGAGCAAGGAACGGGCTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: EMLRQASCHFICLRV*REVSTGEQGTGSGS
Trigger: GCTCCCTGAGCCCGTTCCTTGCTCCCCTGTGCTGACTTCTCTGCACACCCGCAGGCAGATGAAGTGGCATGAGGCCTGTCTCAGCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS GCA 90 bp CCCTCCCATGGAAGTCCAGCAATGCCAGCCAGAGGCATCATGTGCTaGCTATCCAGCCTCACGGGTCACAGCATCAGGGCCGTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: PSHGSPAMPARGIMC*LSSLTGHSIRAVKE
Trigger: CTCCTTGACGGCCCTGATGCTGTGACCCGTGAGGCTGGATAGGCAGCACATGATGCCTCTGGCTGGCATTGCTGGACTTCCATGGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS GCA 90 bp TCCCCCTCCCATGGAAGTCCAGCAATGCCAGCCAGAGGCATCATGTaGTGCCTATCCAGCCTCACGGGTCACAGCATCAGGGCCGTCAAG +
Preference number: 5 (lower is better)
Translates to: SPSHGSPAMPARGIM*CLSSLTGHSIRAVK
Trigger: CTTGACGGCCCTGATGCTGTGACCCGTGAGGCTGGATAGGCAGCACATGATGCCTCTGGCTGGCATTGCTGGACTTCCATGGGAGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS-3UTR CAA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTTGCAAAATGGCTaGCTTCAGGTTGACCACCTT +
Preference number: 5 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPGLQNG*LQVDHL
Trigger: AAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGCC...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGACCCCAGGATGGAGGAGATGCATGTTGATTGCCCATaGGTAGTCACTCCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: CTNWVWGPAVRDPRMEEMHVDCP*VVTPAL
Trigger: GAGCGCTGGAGTGACTACCAATGGGCAATCAACATG...CATCTCCTCCATCCTGGGGTCTCGCACCGCTGGCCCCCACACCCAGTTCGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGAACGCATCTGCCAGGTaGAGAATATCCCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVNASAR*RISQVA
Trigger: AGCCACCTGGGATATTCTCAACCTGGCAGATGCGTT...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCAGGGCCCGGTTCTaGGTGCTGCTGAGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: SGVRSGELEAARGSCTMWSRARF*VLLRVF
Trigger: GAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTAGCAGGGCCCGGTTCTaGGTGCTGCTGAGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: RSGELEAARGSCTMWSGCSRARF*VLLRVF
Trigger: GAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCT...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGCCCTGAACTCCTCGATTTTGGCACTCCCTCCGGCACACGAAACCACACAGGACTCCGGAGCTGCGGGTaGCTGAGATTGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: GPELLDFGTPSGTRNHTGLRSCG*LRLARI
Trigger: GATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAG...TCCTGTGTGGTTTCGTGTGCCGGAGGGAGTGCCAAAATCGAGGAGTTCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CAA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGGTGAAAGCTGTCCACTaGAGCTCCTCCGTACCCTCG +
Preference number: 5 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVVKAVH*SSSVPS
Trigger: CGAGGGTACGGAGGAGCTCAAGTGGACAGCTTTCAC...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCCAGCGCTGGTCAGCTTaGTCCAACAAGGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: WKPLEALAPCGADVRHDAQRWSA*SNKGVS
Trigger: GCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTG...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TGGCCCAGGACTCCCAGCAGTCCCTCCGGTGACTTAGAGTGGTCTGCATCCATCCAGCGCTGGTCAGCTTaGTCCAACAAGGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: WPRTPSSPSGDLEWSASIQRWSA*SNKGVS
Trigger: GCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTG...GATGGATGCAGACCACTCTAAGTCACCGGAGGGACTGCTGGGAGTCCTGGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGTTCATCTCCGAGGAGTaGTTGAGCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVFISEE*LSRATR
Trigger: CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAA...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CATCGTCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCTTCATCTCCGAGGAGTaGTTGAGCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: HRQLLHQGLRLACQVHGAFISEE*LSRATR
Trigger: CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAA...GGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGACGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp GATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGTGGGCTTCATCTCCGAGGAGTaGTTGAGCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: DHLQRLLTLIQPQHPDVGFISEE*LSRATR
Trigger: CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAA...GCCCACGTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CAA 90 bp CGGACGTGGGCCACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCAGGACCAGGGTCACTaGCTGCATGTCCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: RTWATSQATAHTARLHTFQDQGH*LHVQAE
Trigger: TTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCTG...GAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTGGCCCACGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGGGCTCGAAAGGATGTaGGCATCGTCCTCATTAGAG +
Preference number: 5 (lower is better)
Translates to: KTTPGLGRAHTGVTTGLVGLERM*ASSSLE
Trigger: CTCTAATGAGGACGATGCCAACATCCTTTCGAGCCC...CACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTATGAGCAGGAACAGGTaGGCCAGGACTCGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTMSRNR*ARTRFR
Trigger: TCTGAACCGAGTCCTGGCCAACCTGTTCCTGCTCAT...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGATGGCCAGAACCACCTaGGGGCTGGACATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: EDVCDSGLRPEDQLDVGLMARTT*GLDMAD
Trigger: GTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCAT...CAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS GCA 90 bp GCATCCTCAACACTGGACATTGGCTCCCAAGCACCAGCCCCTACTTaGCAGGATCCCCCTCCCATGGAAGTCCAGCAATGCCAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: ASSTLDIGSQAPAPT*QDPPPMEVQQCQPE
Trigger: CTCTGGCTGGCATTGCTGGACTTCCATGGGAGGGGGATCCTGGCAAGTAGGGGCTGGTGCTTGGGAGCCAATGTCCAGTGTTGAGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS CCA 90 bp TGTGCCTGTAGCCACAGCCTAAGGCCCTCCACCTGGAGCCATTCCTaGATCATCCTGGAGCCCCTGTCGCATACCTCAGAGCCCAAACTG +
Preference number: 5 (lower is better)
Translates to: CACSHSLRPSTWSHS*IILEPLSHTSEPKL
Trigger: CAGTTTGGGCTCTGAGGTATGCGACAGGGGCTCCAGGATGATCCAGGAATGGCTCCAGGTGGAGGGCCTTAGGCTGTGGCTACAGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582023.5
CDS CCA 90 bp CTGTCAGGTTCATGGTGCCCTCGAGCAGGATCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCATCTCCTAATGAGGGTGCCACACTG +
Preference number: 5 (lower is better)
Translates to: LSGSWCPRAGSRRGQ*GSRSCASPNEGATL
Trigger: CAGTGTGGCACCCTCATTAGGAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCACCATGAACCTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585249.1
CDS-3UTR CAA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGGGCTTGCAAAATGGCTaGCTTCAGGTTGACCACCTT +
Preference number: 5 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGGLQNG*LQVDHL
Trigger: AAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGCC...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCAACGCATCTGCCAGGTaGAGAATATCCCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: HRGDHWACGPGCSLSSGANASAR*RISQVA
Trigger: AGCCACCTGGGATATTCTCAACCTGGCAGATGCGTT...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGAGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGCGGGTTGCTGAGATaGGCCAGGATCTCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: GGQESGAGNWKPLEALAPCGLLR*ARISPS
Trigger: ACTTGGAGAGATCCTGGCCAATCTCAGCAACCCGCA...TGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACTCCGGAGCTGCGGGTaGCTGAGATTGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: RLAIRLLTLASDRSPCLPLRSCG*LRLARI
Trigger: GATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAG...TGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGC +
Preference number: 5 (lower is better)
Translates to: APCGADVRHDASSFLTASVGKPV*CICSAC
Trigger: GCATGCGGAGCAGATGCACAAGACCGGCTTCCCCAC...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCGTGAAAGCTGTCCACTaGAGCTCCTCCGTACCCTCG +
Preference number: 5 (lower is better)
Translates to: WKPLEALAPCGADVRHDAVKAVH*SSSVPS
Trigger: CGAGGGTACGGAGGAGCTCAAGTGGACAGCTTTCAC...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGTGAAAGCTGTCCACTaGAGCTCCTCCGTACCCTCG +
Preference number: 5 (lower is better)
Translates to: LEAARGSCTMWSGCEARCVKAVH*SSSVPS
Trigger: CGAGGGTACGGAGGAGCTCAAGTGGACAGCTTTCAC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCACTGCTTGCCACATTCTaGGAGCAGGAAGTTTGTACA +
Preference number: 5 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPLLATF*EQEVCT
Trigger: TGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAG...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CGGCCATGCCAAGCCCCTCAGAGTGCAGCAATGGCTTTAGCAGCCACCTGGCGGCCATTCTCCCAGGCATaGAGGATTTCCAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: RPCQAPQSAAMALAATWRPFSQA*RISKMA
Trigger: CGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGG...CCGCCAGGTGGCTGCTAAAGCCATTGCTGCACTCTGAGGGGCTTGGCATGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAGGTTCCAGTAGGGCATaGTGTCCACCCCGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: KKKPGDILEVRSQERGTGGSSRA*CPPRWR
Trigger: CCTCCACCGGGGTGGACACAATGCCCTACTGGAACC...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCCTCCGTACCCTCGGGAGACTCAATGAGCCCCACGAAGCAAGCTTTCCAGATCGGTTCCAGTAGGGCATaGTGTCCACCCCGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: SSVPSGDSMSPTKQAFQIGSSRA*CPPRWR
Trigger: CCTCCACCGGGGTGGACACAATGCCCTACTGGAACC...GATCTGGAAAGCTTGCTTCGTGGGGCTCATTGAGTCTCCCGAGGGTACGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCAGGACCAGGGTCACTaGCTGCATGTCCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: LEAARGSCTMWSGCEARCQDQGH*LHVQAE
Trigger: TTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCTG...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGCAGGACCAGGGTCACTaGCTGCATGTCCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: RSGVRSGELEAARGSCTMQDQGH*LHVQAE
Trigger: TTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCTG...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS TCA 90 bp ACCAGGACTCGGTTCAGAGGGTCCCGCATGTTGACCGTGTGGAGCTaGGAGGCTGAGAGGGAGCTGCTCATGGATCGGTCTGCTGTAATC +
Preference number: 5 (lower is better)
Translates to: TRTRFRGSRMLTVWS*EAERELLMDRSAVI
Trigger: GATTACAGCAGACCGATCCATGAGCAGCTCCCTCTCAGCCTCTCAGCTCCACACGGTCAACATGCGGGACCCTCTGAACCGAGTCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470126.1
CDS GCA 90 bp AGTCCCTGGGATGTGTGCAATGAGGCCTCCTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTGGTGCTGCTGAGGGTTTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SPWDVCNEASSSLAM*SRARFLVLLRVFSR
Trigger: CCTGGAGAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTCATTGCACACATCCCAGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479829.5
ENST00000501516.7
ENST00000580008.5
CDS CCA 90 bp CTGCTGTCATTCTGTGCCTGTAGCCACAGCCTAAGGCCCTCCACCTaGAGCCATTCCTGGATCATCCTGGAGCCCCTGTCGCATACCTCA +
Preference number: 5 (lower is better)
Translates to: LLSFCACSHSLRPST*SHSWIILEPLSHTS
Trigger: TGAGGTATGCGACAGGGGCTCCAGGATGATCCAGGAATGGCTCCAGGTGGAGGGCCTTAGGCTGTGGCTACAGGCACAGAATGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582023.5
CDS-3UTR CAA 90 bp TCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGAGCAGGATCAACGCATCTGCCAGGTaGAGAATATCCCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: STRDCVSPVRFMVPSSRINASAR*RISQVA
Trigger: AGCCACCTGGGATATTCTCAACCTGGCAGATGCGTT...GATCCTGCTCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCTCCGGAGCTGCGGGTaGCTGAGATTGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: LKEETGRHPGGQESGAGNLRSCG*LRLARI
Trigger: GATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAG...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCCACCTGGCGGCCCAGGGGCAGGCTGAGGTCCGTGATGGCCAGAACCACCTTGAAAACCTGTGGAATCTaGAGGAAAGTGAAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: ATWRPRGRLRSVMARTTLKTCGI*RKVKAV
Trigger: GACAGCTTTCACTTTCCTCAAGATTCCACAGGTTTT...CAAGGTGGTTCTGGCCATCACGGACCTCAGCCTGCCCCTGGGCCGCCAGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCTTAGCCATAAGGTTGTaGACGCTGGCCTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: HRGDHWACGPGCSLSSGALAIRL*TLASDR
Trigger: TCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGCGCTTAGCCATAAGGTaGTTGACGCTGGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: RSGVRSGELEAARGSCTMRLAIR*LTLASD
Trigger: GTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGCTCTCGGTCCGCTTaGCGCTTAGCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: RSGVRSGELEAARGSCTMCSRSA*RLAIRL
Trigger: CAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCA...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGAGGATCAGCTGGATGTaGGGCTGGATGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVRISWM*GWMLAF
Trigger: GAATGCCAACATCCAGCCCAACATCCAGCTGATCCT...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CGGATCATCTGCAGCGACTTCTCACGCTCATCCAGCCCCAGCATCCGGACGTGGCCATTCTCCCAGGCATaGAGGATTTCCAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: RIICSDFSRSSSPSIRTWPFSQA*RISKMA
Trigger: CGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGG...CCACGTCCGGATGCTGGGGCTGGATGAGCGTGAGAAGTCGCTGCAGATGATCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000581058.5
CDS-3UTR CAA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGGGTTCCAGTAGGGCATaGTGTCCACCCCGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAGSSRA*CPPRWR
Trigger: CCTCCACCGGGGTGGACACAATGCCCTACTGGAACC...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGTCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGCCCTTCTCCAGCACCTaGGCAAAAATGTCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: RSGVRSGELEAARGSCTMPFSST*AKMSVS
Trigger: GCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGGG...CATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp ACACACTCCTCCATGAACCACTGCACGAACTGGGTGTGGGGGCCAGCGGTGCGAGGGCTCGAAAGGATGTaGGCATCGTCCTCATTAGAG +
Preference number: 5 (lower is better)
Translates to: THSSMNHCTNWVWGPAVRGLERM*ASSSLE
Trigger: CTCTAATGAGGACGATGCCAACATCCTTTCGAGCCC...TCGCACCGCTGGCCCCCACACCCAGTTCGTGCAGTGGTTCATGGAGGAGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGATGAGCAGGAACAGGTaGGCCAGGACTCGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: SGVRSGELEAARGSCTMWMSRNR*ARTRFR
Trigger: TCTGAACCGAGTCCTGGCCAACCTGTTCCTGCTCAT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCATGGCCAGAACCACCTaGGGGCTGGACATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: APCGADVRHDASSFLTASMARTT*GLDMAD
Trigger: GTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCAT...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp ACACGAAACCACACAGGAAGGCTTCCCCTGAGGACAACAGGGAGGGAGGGGCCTAGAATCCAGTGGCTGTaGGTTGATTGGCTCGGGTGC +
Preference number: 5 (lower is better)
Translates to: TRNHTGRLPLRTTGREGPRIQWL*VDWLGC
Trigger: GCACCCGAGCCAATCAACCAACAGCCACTGGATTCT...AGGCCCCTCCCTCCCTGTTGTCCTCAGGGGAAGCCTTCCTGTGTGGTTTCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CAA 90 bp TCCTCGATTTTGGCACTCCCTCCGGCACACGAAACCACACAGGAAGGCTTCCCCCTGAACTCCTCGATTTaGGCACTCCCTCCGGCACAC +
Preference number: 5 (lower is better)
Translates to: SSILALPPAHETTQEGFPLNSSI*ALPPAH
Trigger: GTGTGCCGGAGGGAGTGCCAAAATCGAGGAGTTCAG...GGGGAAGCCTTCCTGTGTGGTTTCGTGTGCCGGAGGGAGTGCCAAAATCGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS TCA 90 bp TCGGTTCAGAGGGTCCCGCATGTTGACCGTGTGGAGCTGAGAGGCTaGGAGGGAGCTGCTCATGGATCGGTCTGCTGTAATCCCAGCATT +
Preference number: 5 (lower is better)
Translates to: SVQRVPHVDRVELRG*EGAAHGSVCCNPSI
Trigger: AATGCTGGGATTACAGCAGACCGATCCATGAGCAGCTCCCTCTCAGCCTCTCAGCTCCACACGGTCAACATGCGGGACCCTCTGAACCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470126.1
CDS TCA 90 bp CAGGACCCCATTCTCCCAGGCATTGAGGATTTCCAAGATGGCGGCTaGGATGCTGAGACAGGCCTCATGCCACTTCATCTGCCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: QDPILPGIEDFQDGG*DAETGLMPLHLPAG
Trigger: ACCCGCAGGCAGATGAAGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGGGGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS-3UTR CAA 90 bp AAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGGGCTTGCAAAATGGCTaGCTTCAGGTTGACCACCTT +
Preference number: 5 (lower is better)
Translates to: KFLRGKTTPGLGRAHTGVGLQNG*LQVDHL
Trigger: AAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGCC...CACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCAACGCATCTGCCAGGTaGAGAATATCCCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: WKPLEALAPCGADVRHDANASAR*RISQVA
Trigger: AGCCACCTGGGATATTCTCAACCTGGCAGATGCGTT...GGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGAGCAGGGCCCGGTTCTaGGTGCTGCTGAGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LVHLLRMHRQHRGDAPNESRARF*VLLRVF
Trigger: GAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCT...CTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000580008.5
CDS-3UTR CAA 90 bp CTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCCTAATGAGCAGCGCTGGTCAGCTTaGTCCAACAAGGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: LVHLLRMHRQHRGDAPNEQRWSA*SNKGVS
Trigger: GCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTG...CTCATTAGGAGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp TCAGCTGCTCCACCAGGGACTGCGTCTCGCCTGTCAGGTTCATGGTGCCCTCGATTTGTACAGTCACAGTaGCAGCGCTGGTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SAAPPGTASRLSGSWCPRFVQSQ*QRWSAL
Trigger: CAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAA...TCGAGGGCACCATGAACCTGACAGGCGAGACGCAGTCCCTGGTGGAGCAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp CTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTCTGCTTGCCACATTCTaGGAGCAGGAAGTTTGTACA +
Preference number: 5 (lower is better)
Translates to: LRGKTTPGLGRAHTGVTTLLATF*EQEVCT
Trigger: TGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAG...AGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GTCGGGGCGGAAGCAGGGGTGGTCAGGGTTCAGGATCTTGCCCTCCTCAGGCATCTGCTTGCCACATTCTaGGAGCAGGAAGTTTGTACA +
Preference number: 5 (lower is better)
Translates to: VGAEAGVVRVQDLALLRHLLATF*EQEVCT
Trigger: TGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAG...ATGCCTGAGGAGGGCAAGATCCTGAACCCTGACCACCCCTGCTTCCGCCCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp GAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACAGCATCGTGGGGATGCTCGCTTAGCCATAAGGTaGTTGACGCTGGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: EAGLVHLLRMHRQHRGDARLAIR*LTLASD
Trigger: GTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG...AGCATCCCCACGATGCTGTCTGTGCATGCGGAGCAGATGCACAAGACCGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp ATTCTCTCCCGATTTCTGCTGGGGTGCGTGCTCTCGGTCCGCTTTGCGCTTAGCCGCTTAGCCATAAGGTaGTTGACGCTGGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: ILSRFLLGCVLSVRFALSRLAIR*LTLASD
Trigger: GTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG...GCTAAGCGCAAAGCGGACCGAGAGCACGCACCCCAGCAGAAATCGGGAGAGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGGATCAGCTGGATGTaGGGCTGGATGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: SGVRSGELEAARGSCTMWRISWM*GWMLAF
Trigger: GAATGCCAACATCCAGCCCAACATCCAGCTGATCCT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATTCATCTCCGAGGAGTaGTTGAGCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTFISEE*LSRATR
Trigger: CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCTTCATCTCCGAGGAGTaGTTGAGCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: APCGADVRHDASSFLTASFISEE*LSRATR
Trigger: CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAA...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAATGAGGCTGTGCCACTaGGAGGAGTCAGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTMRLCH*EESVSR
Trigger: CCTGCTCACTGACTCCTCCAAGTGGCACAGCCTCAT...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GAGCTGCTCATGGATCGGTCTGTGGGGCTCGAAAGGATGTTGGCATCGTCCTCAATGAGGCTGTGCCACTaGGAGGAGTCAGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ELLMDRSVGLERMLASSSMRLCH*EESVSR
Trigger: CCTGCTCACTGACTCCTCCAAGTGGCACAGCCTCAT...TGAGGACGATGCCAACATCCTTTCGAGCCCCACAGACCGATCCATGAGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGGGCTCGAAAGGATGTaGGCATCGTCCTCATTAGAG +
Preference number: 5 (lower is better)
Translates to: RSGELEAARGSCTMWSGCGLERM*ASSSLE
Trigger: CTCTAATGAGGACGATGCCAACATCCTTTCGAGCCC...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCATGGCCAGAACCACCTaGGGGCTGGACATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: LEALAPCGADVRHDASSFMARTT*GLDMAD
Trigger: GTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCAT...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS GCA 90 bp TTGAGGATTTCCAAGATGGCGGCTGAGATGCTGAGACAGGCCTCATaGCACTTCATCTGCCTGCGGGTGTGCAGAGAAGTCAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: LRISKMAAEMLRQAS*HFICLRVCREVSTG
Trigger: CCCTGTGCTGACTTCTCTGCACACCCGCAGGCAGATGAAGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGAAATCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CCA 90 bp CACTTGAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTaGATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HLRMFVTVGSARRIS*MLGWMLAFSPDFCW
Trigger: CCAGCAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580885.5
CDS-3UTR CAA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACCATGTTGATTGCCCATaGGTAGTCACTCCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHHVDCP*VVTPAL
Trigger: GAGCGCTGGAGTGACTACCAATGGGCAATCAACATG...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCGACAAGATGAGAGGATaGGGGGATGGTCCAATCATG +
Preference number: 5 (lower is better)
Translates to: LEAARGSCTMWSGCEARCDKMRG*GDGPIM
Trigger: CATGATTGGACCATCCCCCAATCCTCTCATCTTGTC...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGACAAGATGAGAGGATaGGGGGATGGTCCAATCATG +
Preference number: 5 (lower is better)
Translates to: RSGELEAARGSCTMWSGCDKMRG*GDGPIM
Trigger: CATGATTGGACCATCCCCCAATCCTCTCATCTTGTC...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACATGCGGGTTGCTGAGATaGGCCAGGATCTCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTCGLLR*ARISPS
Trigger: ACTTGGAGAGATCCTGGCCAATCTCAGCAACCCGCA...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCTGCGGGTTGCTGAGATaGGCCAGGATCTCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: APCGADVRHDASSFLTASCGLLR*ARISPS
Trigger: ACTTGGAGAGATCCTGGCCAATCTCAGCAACCCGCA...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGCTCCGGAGCTGCGGGTaGCTGAGATTGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: NFERRNRETSWRSGVRSGLRSCG*LRLARI
Trigger: GATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAG...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GAGGATGTTTGTGACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGTTTGTACAGTCACAGTaGCAGCGCTGGTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: EDVCDSGLRPEDQLDVGLFVQSQ*QRWSAL
Trigger: CAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAA...CAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGTCACAAACATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp CTGGGCCACATGGCACAGCATGAGGAAGGAGATGTCAAACAGCAGGGCCCGGACTTAGCCATAAGGTTGTaGACGCTGGCCTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: LGHMAQHEEGDVKQQGPDLAIRL*TLASDR
Trigger: TCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA...GTCCGGGCCCTGCTGTTTGACATCTCCTTCCTCATGCTGTGCCATGTGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp TGGCCCAGGACTCCCAGCAGTCCCTCCGGTGACTTAGAGTGGTCTGCATCCATCTTAGCCATAAGGTTGTaGACGCTGGCCTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: WPRTPSSPSGDLEWSASILAIRL*TLASDR
Trigger: TCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA...GATGGATGCAGACCACTCTAAGTCACCGGAGGGACTGCTGGGAGTCCTGGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACATGCTCTCGGTCCGCTTaGCGCTTAGCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTCSRSA*RLAIRL
Trigger: CAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCA...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CTCTCGGTCCGCTTTGCGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGTGCTCTCGGTCCGCTTaGCGCTTAGCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: LSVRFALSHKVVDAGLRQCSRSA*RLAIRL
Trigger: CAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCA...CTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCGCAAAGCGGACCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTATGTTGGGCTGGATGTaGGCATTCTCTCCCGATTTC +
Preference number: 5 (lower is better)
Translates to: RSGELEAARGSCTMWSGCMLGWM*AFSPDF
Trigger: GAAATCGGGAGAGAATGCCAACATCCAGCCCAACAT...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTATGTTGGGCTGGATGTaGGCATTCTCTCCCGATTTC +
Preference number: 5 (lower is better)
Translates to: QWAPPGGSAGCWAGCWHSMLGWM*AFSPDF
Trigger: GAAATCGGGAGAGAATGCCAACATCCAGCCCAACAT...AGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp GCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAGGATCAGCTGGATGTaGGGCTGGATGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: ASRKFLRGKTTPGLGRAHRISWM*GWMLAF
Trigger: GAATGCCAACATCCAGCCCAACATCCAGCTGATCCT...GTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCTCTGCATCCATCGTCTaGAGGATGTTTGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: GVRSGELEAARGSCTMWSSASIV*RMFVTV
Trigger: CACTGTCACAAACATCCTCAAGACGATGGATGCAGA...GCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGCTTGTGGTCCAGTGAATTCATTCAAATaGATGAATTTCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: YSWAGAGAHRGDHWACGPVNSFK*MNFRAK
Trigger: CTTCGCCCGGAAATTCATCAATTTGAATGAATTCAC...TGGACCACAAGCCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACACCCTTCTCCAGCACCTaGGCAAAAATGTCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTPFSST*AKMSVS
Trigger: GCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGGG...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTCAGGACCAGGGTCACTaGCTGCATGTCCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: ALAPCGADVRHDASSFLTQDQGH*LHVQAE
Trigger: TTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCTG...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCAGGACCAGGGTCACTaGCTGCATGTCCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPQDQGH*LHVQAE
Trigger: TTCTGCCTGGACATGCAGCAAGTGACCCTGGTCCTG...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCGCTTAGCCATAAGGTaGTTGACGCTGGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: FASRKFLRGKTTPGLGRARLAIR*LTLASD
Trigger: GTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTCGCTTAGCCATAAGGTaGTTGACGCTGGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: ALAPCGADVRHDASSFLTRLAIR*LTLASD
Trigger: GTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTTGCTCTCGGTCCGCTTaGCGCTTAGCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPCSRSA*RLAIRL
Trigger: CAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCA...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAAGGATCAGCTGGATGTaGGGCTGGATGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTRISWM*GWMLAF
Trigger: GAATGCCAACATCCAGCCCAACATCCAGCTGATCCT...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTTCTGCATCCATCGTCTaGAGGATGTTTGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: RSGELEAARGSCTMWSGCSASIV*RMFVTV
Trigger: CACTGTCACAAACATCCTCAAGACGATGGATGCAGA...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp ACAGTGGGCTCCGCCCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTGCATCCATCGTCTaGAGGATGTTTGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: TVGSARRISWMLGWMLAFSASIV*RMFVTV
Trigger: CACTGTCACAAACATCCTCAAGACGATGGATGCAGA...GAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGGGCGGAGCCCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp AGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGGGTGACCACTGGGGTGAATTCATTCAAATaGATGAATTTCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: RGKTTPGLGRAHTGVTTGVNSFK*MNFRAK
Trigger: CTTCGCCCGGAAATTCATCAATTTGAATGAATTCAC...CCCAGTGGTCACCCCTGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACACCATTCTCCCAGGCATaGAGGATTTCCAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTPFSQA*RISKMA
Trigger: CGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGG...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGACCATTCTCCCAGGCATaGAGGATTTCCAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: KKKPGDILEVRSQERGTGPFSQA*RISKMA
Trigger: CGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGG...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACCCCTTCTCCAGCACCTaGGCAAAAATGTCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: LKEETGRHPGGQESGAGNPFSST*AKMSVS
Trigger: GCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGGG...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCCCTTCTCCAGCACCTaGGCAAAAATGTCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAPFSST*AKMSVS
Trigger: GCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGGG...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCCCTTCTCCAGCACCTaGGCAAAAATGTCCGTCAGC +
Preference number: 5 (lower is better)
Translates to: LEALAPCGADVRHDASSFPFSST*AKMSVS
Trigger: GCTGACGGACATTTTTGCCAAGGTGCTGGAGAAGGG...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CGCTTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCAGGGCTCGAAAGGATGTaGGCATCGTCCTCATTAGAG +
Preference number: 5 (lower is better)
Translates to: RLAIRLLTLASDRSPCLPGLERM*ASSSLE
Trigger: CTCTAATGAGGACGATGCCAACATCCTTTCGAGCCC...TGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS TCA 90 bp AAACTGAAAGGAATGGAGACAGGCTGCATTGACCAGGGCATGAGCTaGGCAGTAGCTGGGCGCTGGGGCTACACATGTTCAGAGAGCGAT +
Preference number: 5 (lower is better)
Translates to: KLKGMETGCIDQGMS*AVAGRWGYTCSESD
Trigger: ATCGCTCTCTGAACATGTGTAGCCCCAGCGCCCAGCTACTGCTCAGCTCATGCCCTGGTCAATGCAGCCTGTCTCCATTCCTTTCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584782.5
CDS CCA 90 bp ATGCAGCAAGGAACGCCCCGCTGTCTTCTGGGAATGGTAGTTCCTTaGACTGAAACCGTATTTGTCTGCGCCGGCGAGGAAACTAAGGGA +
Preference number: 5 (lower is better)
Translates to: MQQGTPRCLLGMVVP*TETVFVCAGEETKG
Trigger: TCCCTTAGTTTCCTCGCCGGCGCAGACAAATACGGTTTCAGTCCAAGGAACTACCATTCCCAGAAGACAGCGGGGCGTTCCTTGCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580302.1
CDS-3UTR CAA 90 bp CATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACAGGCTTGCAAAATGGCTaGCTTCAGGTTGACCACCTT +
Preference number: 5 (lower is better)
Translates to: HLESSSEVRLLLGWGGRTGLQNG*LQVDHL
Trigger: AAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGCC...TGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAGGCTTGCAAAATGGCTaGCTTCAGGTTGACCACCTT +
Preference number: 5 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTGLQNG*LQVDHL
Trigger: AAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGCC...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTCATGTTGATTGCCCATaGGTAGTCACTCCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: ALAPCGADVRHDASSFLTHVDCP*VVTPAL
Trigger: GAGCGCTGGAGTGACTACCAATGGGCAATCAACATG...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAGACAAGATGAGAGGATaGGGGGATGGTCCAATCATG +
Preference number: 5 (lower is better)
Translates to: KKKPGDILEVRSQERGTGDKMRG*GDGPIM
Trigger: CATGATTGGACCATCCCCCAATCCTCTCATCTTGTC...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCAGCAGGGCCCGGTTCTaGGTGCTGCTGAGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: GNFERRNRETSWRSGVRSSRARF*VLLRVF
Trigger: GAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCT...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGAGGCCTCCTCTAGTTaGGCGATGTGCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: QVPADGEEILKEETGRHPEASSS*AMCSRA
Trigger: GGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTC...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGAGGCCTCCTCTAGTTaGGCGATGTGCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GEEILKEETGRHPGGQESEASSS*AMCSRA
Trigger: GGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTC...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATGAGGCCTCCTCTAGTTaGGCGATGTGCAGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: PQVPADGEEILKEETGRHEASSS*AMCSRA
Trigger: GGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTC...ATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGCTCCGGAGCTGCGGGTaGCTGAGATTGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: DGEEILKEETGRHPGGQELRSCG*LRLARI
Trigger: GATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAG...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGC +
Preference number: 5 (lower is better)
Translates to: QVPADGEEILKEETGRHPVGKPV*CICSAC
Trigger: GCATGCGGAGCAGATGCACAAGACCGGCTTCCCCAC...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCAGGAGTCAGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAACTCAAAAGCACAGTaGACATCCTCAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SGVRSGELEAARGSCTMWNSKAQ*TSSVKS
Trigger: GGACTTCACTGAGGATGTCAACTGTGCTTTTGAGTT...CCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCTGACTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGATTTGTACAGTCACAGTaGCAGCGCTGGTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: KKKPGDILEVRSQERGTGFVQSQ*QRWSAL
Trigger: CAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAA...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGCTTCCTTAGCCATAAGGTTGTaGACGCTGGCCTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: APCGADVRHDASSFLTASLAIRL*TLASDR
Trigger: TCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA...GGAAGCAGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGATTAGCCATAAGGTTGTaGACGCTGGCCTCAGACAGA +
Preference number: 5 (lower is better)
Translates to: KKKPGDILEVRSQERGTGLAIRL*TLASDR
Trigger: TCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAATGCTCTCGGTCCGCTTaGCGCTTAGCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: FERRNRETSWRSGVRSGECSRSA*RLAIRL
Trigger: CAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCA...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGATGAGGCTGTGCCACTaGGAGGAGTCAGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: NFERRNRETSWRSGVRSGMRLCH*EESVSR
Trigger: CCTGCTCACTGACTCCTCCAAGTGGCACAGCCTCAT...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTGGGCTCGAAAGGATGTaGGCATCGTCCTCATTAGAG +
Preference number: 5 (lower is better)
Translates to: ALAPCGADVRHDASSFLTGLERM*ASSSLE
Trigger: CTCTAATGAGGACGATGCCAACATCCTTTCGAGCCC...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp CACAGGGGTGACCACTGGGCTTGTGGTCCAGGCTGCTCACTCTCCTCAGGTGCCACACACATACACACTTaGCATCTAGAAAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HRGDHWACGPGCSLSSGATHIHT*HLESSS
Trigger: TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGT...GGCACCTGAGGAGAGTGAGCAGCCTGGACCACAAGCCCAGTGGTCACCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS CCA 90 bp GGCGGGGCCTTGTCTGTCATCCCCAATCTAGCTCCTGAGTGTCTATaGTCATACCTTACTGATGGCTGTGAGGACAGAAGAGTAGGACAC +
Preference number: 5 (lower is better)
Translates to: GGALSVIPNLAPECL*SYLTDGCEDRRVGH
Trigger: GTGTCCTACTCTTCTGTCCTCACAGCCATCAGTAAGGTATGACCATAGACACTCAGGAGCTAGATTGGGGATGACAGACAAGGCCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS-3UTR CAA 90 bp TTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACGACAAGATGAGAGGATaGGGGGATGGTCCAATCATG +
Preference number: 5 (lower is better)
Translates to: LKEETGRHPGGQESGAGNDKMRG*GDGPIM
Trigger: CATGATTGGACCATCCCCCAATCCTCTCATCTTGTC...GTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCGCTGGTCAGCTTTGTCCAACAAGGGGGTGAGCTTCAGCAGGAACTCAAAAGCGACAAGATGAGAGGATaGGGGGATGGTCCAATCATG +
Preference number: 5 (lower is better)
Translates to: ALVSFVQQGGELQQELKSDKMRG*GDGPIM
Trigger: CATGATTGGACCATCCCCCAATCCTCTCATCTTGTC...GCTTTTGAGTTCCTGCTGAAGCTCACCCCCTTGTTGGACAAAGCTGACCAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTAGCAGGGCCCGGTTCTaGGTGCTGCTGAGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: QVPADGEEILKEETGRHPSRARF*VLLRVF
Trigger: GAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCT...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGCCAGGATCTCTCCAAGTTTCAAGAGAGAATGCTCGATGGCAGTCCAAGAAGCTGCGGGTTGCTGAGATaGGCCAGGATCTCTCCAAGT +
Preference number: 5 (lower is better)
Translates to: GQDLSKFQERMLDGSPRSCGLLR*ARISPS
Trigger: ACTTGGAGAGATCCTGGCCAATCTCAGCAACCCGCA...GCTTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACTTGGAGAGATCCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580008.5
CDS-3UTR CAA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCAAAAACCTGTGGAATCTaGAGGAAAGTGAAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: GELEAARGSCTMWSGCEAKTCGI*RKVKAV
Trigger: GACAGCTTTCACTTTCCTCAAGATTCCACAGGTTTT...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGTTTGTACAGTCACAGTaGCAGCGCTGGTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAFVQSQ*QRWSAL
Trigger: CAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAA...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGATGTTGGGCTGGATGTaGGCATTCTCTCCCGATTTC +
Preference number: 5 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAMLGWM*AFSPDF
Trigger: GAAATCGGGAGAGAATGCCAACATCCAGCCCAACAT...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CCGGAGGATCAGCTGGATGTTGGGCTGGATGTTGGCATTCTCTCCCGATTTCTGATGTTGGGCTGGATGTaGGCATTCTCTCCCGATTTC +
Preference number: 5 (lower is better)
Translates to: PEDQLDVGLDVGILSRFLMLGWM*AFSPDF
Trigger: GAAATCGGGAGAGAATGCCAACATCCAGCCCAACAT...CAGAAATCGGGAGAGAATGCCAACATCCAGCCCAACATCCAGCTGATCCTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCTTCATCTCCGAGGAGTaGTTGAGCAGGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: GNFERRNRETSWRSGVRSFISEE*LSRATR
Trigger: CCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAA...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGATGAGGCTGTGCCACTaGGAGGAGTCAGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ASRWRGNFERRNRETSWRMRLCH*EESVSR
Trigger: CCTGCTCACTGACTCCTCCAAGTGGCACAGCCTCAT...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGATGAGCAGGAACAGGTaGGCCAGGACTCGGTTCAGA +
Preference number: 5 (lower is better)
Translates to: NFERRNRETSWRSGVRSGMSRNR*ARTRFR
Trigger: TCTGAACCGAGTCCTGGCCAACCTGTTCCTGCTCAT...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AGGAGCGGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 5 (lower is better)
Translates to: RSGELEAARGSCTMWSGCDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...ACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCCGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp GGGGAACTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCAGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 5 (lower is better)
Translates to: GELEAARGSCTMWSGCEADGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...TGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp TCACGGCGTGGACAGTGGGGAAGCCGGTCTTGTGCATCTGCTCCGCATGCACAGACACACATACACACTTaGCATCTAGAAAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: SRRGQWGSRSCASAPHAQTHIHT*HLESSS
Trigger: TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGT...CTGTGCATGCGGAGCAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGAACGCATCTGCCAGGTaGAGAATATCCCAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: NFERRNRETSWRSGVRSGNASAR*RISQVA
Trigger: AGCCACCTGGGATATTCTCAACCTGGCAGATGCGTT...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTCACTCTGCTTGCCACATTCTaGGAGCAGGAAGTTTGTACA +
Preference number: 5 (lower is better)
Translates to: ALAPCGADVRHDASSFLTLLATF*EQEVCT
Trigger: TGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAG...AGTGAGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTGCTTGCCACATTCTaGGAGCAGGAAGTTTGTACA +
Preference number: 5 (lower is better)
Translates to: LEALAPCGADVRHDASSFLLATF*EQEVCT
Trigger: TGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAG...GAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGCGCTTAGCCATAAGGTaGTTGACGCTGGCCTCAGAC +
Preference number: 5 (lower is better)
Translates to: ASRWRGNFERRNRETSWRRLAIR*LTLASD
Trigger: GTCTGAGGCCAGCGTCAACAACCTTATGGCTAAGCG...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp ACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATTCTTGGAGCAGGAAGTTTTCTGCATCCATCGTCTaGAGGATGTTTGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: TLASDRSPCLPHSWSRKFSASIV*RMFVTV
Trigger: CACTGTCACAAACATCCTCAAGACGATGGATGCAGA...AAACTTCCTGCTCCAAGAATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp ATGTCAAACAGCAGGGCCCGGACGGAGGCCGGTTTGGTGCTTTCTTCGCTGCCAGTGAATTCATTCAAATaGATGAATTTCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: MSNSRARTEAGLVLSSLPVNSFK*MNFRAK
Trigger: CTTCGCCCGGAAATTCATCAATTTGAATGAATTCAC...TGGCAGCGAAGAAAGCACCAAACCGGCCTCCGTCCGGGCCCTGCTGTTTGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGCCATTCTCCCAGGCATaGAGGATTTCCAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: NFERRNRETSWRSGVRSGPFSQA*RISKMA
Trigger: CGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGG...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTATGAGGCTGTGCCACTaGGAGGAGTCAGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QVPADGEEILKEETGRHPMRLCH*EESVSR
Trigger: CCTGCTCACTGACTCCTCCAAGTGGCACAGCCTCAT...AGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CTGGAAGCCGCTAGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCACACACATACACACTTaGCATCTAGAAAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LEAARGSCTMWSGCEARCTHIHT*HLESSS
Trigger: TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGT...GCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCTAGCGGCTTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp TCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGCACACAATGGCTTGCTTCAGGTaGACCACCTTCATTATTTCA +
Preference number: 5 (lower is better)
Translates to: SRKFLRGKTTPGLGRAHTMACFR*TTFIIS
Trigger: TGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCAT...TGTGTGCGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCCTCCGTACCCTCGGGAGACTCAATGAGCCCCACGAAGCAAGCTTTCCAGATCATGGCTTGCTTCAGGTaGACCACCTTCATTATTTCA +
Preference number: 5 (lower is better)
Translates to: SSVPSGDSMSPTKQAFQIMACFR*TTFIIS
Trigger: TGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCAT...GATCTGGAAAGCTTGCTTCGTGGGGCTCATTGAGTCTCCCGAGGGTACGGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGACTCCGGAGCTGCGGGTaGCTGAGATTGGCCAGGATC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHTHFASRKFLRLRSCG*LRLARI
Trigger: GATCCTGGCCAATCTCAGCAACCCGCAGCTCCGGAG...TCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGTGGGGAAGCCGGTCTaGTGCATCTGCTCCGCATGC +
Preference number: 5 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLVGKPV*CICSAC
Trigger: GCATGCGGAGCAGATGCACAAGACCGGCTTCCCCAC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATCTGCTTGCCACATTCTaGGAGCAGGAAGTTTGTACA +
Preference number: 5 (lower is better)
Translates to: LAIRLLTLASDRSPCLPHLLATF*EQEVCT
Trigger: TGTACAAACTTCCTGCTCCAAGAATGTGGCAAGCAG...ATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCAGGATCAGCTGGATGTaGGGCTGGATGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: GNFERRNRETSWRSGVRSRISWM*GWMLAF
Trigger: GAATGCCAACATCCAGCCCAACATCCAGCTGATCCT...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAACCAGGGACTCCACTTaGGTGGAGTCGGGGCGGAAG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHIHTLHLESSSTRDST*VESGRK
Trigger: CTTCCGCCCCGACTCCACCAAAGTGGAGTCCCTGGT...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGGTTCCAGTAGGGCATaGTGTCCACCCCGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLGSSRA*CPPRWR
Trigger: CCTCCACCGGGGTGGACACAATGCCCTACTGGAACC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTAGCCATAAGGTTGTTGACGCTGGCCTCAGACAGAAGCCCCTGCTTGCCACATCCAAAACCTGTGGAATaGATGGCTGTGAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: LAIRLLTLASDRSPCLPHPKPVE*MAVRTE
Trigger: TTCTGTCCTCACAGCCATCAATTCCACAGGTTTTGG...ATGTGGCAAGCAGGGGCTTCTGTCTGAGGCCAGCGTCAACAACCTTATGGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578901.1
CDS GCA 90 bp GTGACAGCTCAGACGGTCACAAAACATGTCCATGATGTCCAGCAATaGCTGGACACACAGGTCCCGAGAAAAGTCATCAAACTGGGAACT +
Preference number: 5 (lower is better)
Translates to: VTAQTVTKHVHDVQQ*LDTQVPRKVIKLGT
Trigger: AGTTCCCAGTTTGATGACTTTTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACATCATGGACATGTTTTGTGACCGTCTGAGCTGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394127.6
ENST00000428757.6
ENST00000543759.6
ENST00000580008.5
ENST00000580517.5
CDS-3UTR CAA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGAAGCAGGGCCCGGTTCTaGGTGCTGCTGAGGGTTTTC +
Preference number: 5 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRSRARF*VLLRVF
Trigger: GAAAACCCTCAGCAGCACCAAGAACCGGGCCCTGCT...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGCGGGCGAAAACCTGTGGAATCTaGAGGAAAGTGAAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: FASRKFLRGKTTPGLGRAKTCGI*RKVKAV
Trigger: GACAGCTTTCACTTTCCTCAAGATTCCACAGGTTTT...CGCCCGCCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAAAACTCAAAAGCACAGTaGACATCCTCAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: FERRNRETSWRSGVRSGENSKAQ*TSSVKS
Trigger: GGACTTCACTGAGGATGTCAACTGTGCTTTTGAGTT...TTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CACAAGCCAAGCCACAGCACACACCGCCAGACTGCATACCTTCCCTTTGATGTTAACTCAAAAGCACAGTaGACATCCTCAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: HKPSHSTHRQTAYLPFDVNSKAQ*TSSVKS
Trigger: GGACTTCACTGAGGATGTCAACTGTGCTTTTGAGTT...AACATCAAAGGGAAGGTATGCAGTCTGGCGGTGTGTGCTGTGGCTTGGCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCACAGCGCTGGTCAGCTTaGTCCAACAAGGGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: THTHTHTHIHTLHLESSSQRWSA*SNKGVS
Trigger: GCTCACCCCCTTGTTGGACAAAGCTGACCAGCGCTG...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp ACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGCTGGTCAGCTTTAGGATCAGCTGGATGTaGGGCTGGATGTTGGCATTC +
Preference number: 5 (lower is better)
Translates to: TFLEQEVCTVTVAALVSFRISWM*GWMLAF
Trigger: GAATGCCAACATCCAGCCCAACATCCAGCTGATCCT...AAAGCTGACCAGCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp AGCTTCATCTCCGAGGAGTTGTTGAGCAGGGCCACCAGGGACTCCACTTTGGTGGTGAATTCATTCAAATaGATGAATTTCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: SFISEELLSRATRDSTLVVNSFK*MNFRAK
Trigger: CTTCGCCCGGAAATTCATCAATTTGAATGAATTCAC...CACCAAAGTGGAGTCCCTGGTGGCCCTGCTCAACAACTCCTCGGAGATGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGGGCTCGAAAGGATGTaGGCATCGTCCTCATTAGAG +
Preference number: 5 (lower is better)
Translates to: SLSSGASRWRGNFERRNRGLERM*ASSSLE
Trigger: CTCTAATGAGGACGATGCCAACATCCTTTCGAGCCC...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGAATGGCCAGAACCACCTaGGGGCTGGACATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRMARTT*GLDMAD
Trigger: GTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCAT...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCATGGCCAGAACCACCTaGGGGCTGGACATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLMARTT*GLDMAD
Trigger: GTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCAT...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp AGAGGCTCTTGCACCATGTGGAGCGGATGTGAGGCACGATGCCTCATCTTTCCTGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 5 (lower is better)
Translates to: RGSCTMWSGCEARCLIFPDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...AGGAAAGATGAGGCATCGTGCCTCACATCCGCTCCACATGGTGCAAGAGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp AAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGAACTGGAACACACATACACACTTaGCATCTAGAAAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: KKKPGDILEVRSQERGTGTHIHT*HLESSS
Trigger: TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGT...TCCAGTTCCCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS CCA 90 bp CAGCTCAGACGGTCACAAAACATGTCCATGATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAAAAGTCATCAAACTGGGAACTAATG +
Preference number: 5 (lower is better)
Translates to: QLRRSQNMSMMSSNA*THRSREKSSNWELM
Trigger: CATTAGTTCCCAGTTTGATGACTTTTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACATCATGGACATGTTTTGTGACCGTCTGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394127.6
ENST00000428757.6
ENST00000543759.6
ENST00000580008.5
ENST00000580517.5
CDS CCA 90 bp CAGCTCAGACGGTCACAAAACATGTCCATGATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAAAAGTCATCAAACTTACTGATGGCT +
Preference number: 5 (lower is better)
Translates to: QLRRSQNMSMMSSNA*THRSREKSSNLLMA
Trigger: AGCCATCAGTAAGTTTGATGACTTTTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACATCATGGACATGTTTTGTGACCGTCTGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000394126.5
ENST00000394128.7
ENST00000479829.5
ENST00000501516.7
ENST00000535071.6
ENST00000537674.6
ENST00000578161.2
ENST00000580885.5
ENST00000582023.5
ENST00000585306.5
CDS-3UTR CAA 90 bp TTCAAATTGATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGGCGGCGAACTCAAAAGCACAGTaGACATCCTCAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: FKLMNFRAKDFSFPVAAANSKAQ*TSSVKS
Trigger: GGACTTCACTGAGGATGTCAACTGTGCTTTTGAGTT...CGCCGCCGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCATCAATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGATGTTGGGCTGGATGTaGGCATTCTCTCCCGATTTC +
Preference number: 5 (lower is better)
Translates to: DGEEILKEETGRHPGGQEMLGWM*AFSPDF
Trigger: GAAATCGGGAGAGAATGCCAACATCCAGCCCAACAT...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp ACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCCTGGGCTGGGGTCTGCATCCATCGTCTaGAGGATGTTTGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: THFASRKFLRGKTTPGLGSASIV*RMFVTV
Trigger: CACTGTCACAAACATCCTCAAGACGATGGATGCAGA...CCCCAGCCCAGGAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS GCA 90 bp GTGACAGCTCAGACGGTCACAAAACATGTCCATGATGTCCAGCAATaGCTGGACACACAGGTCCCGAGAAAAGTCATCAAACTTACTGAT +
Preference number: 5 (lower is better)
Translates to: VTAQTVTKHVHDVQQ*LDTQVPRKVIKLTD
Trigger: ATCAGTAAGTTTGATGACTTTTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACATCATGGACATGTTTTGTGACCGTCTGAGCTGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000394126.5
ENST00000394128.7
ENST00000479829.5
ENST00000501516.7
ENST00000535071.6
ENST00000537674.6
ENST00000578161.2
ENST00000580885.5
ENST00000582023.5
ENST00000585306.5
CDS-3UTR CAA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGATGGCTTGCTTCAGGTaGACCACCTTCATTATTTCA +
Preference number: 5 (lower is better)
Translates to: NFERRNRETSWRSGVRSGMACFR*TTFIIS
Trigger: TGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCAT...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCAACTCAAAAGCACAGTaGACATCCTCAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GNFERRNRETSWRSGVRSNSKAQ*TSSVKS
Trigger: GGACTTCACTGAGGATGTCAACTGTGCTTTTGAGTT...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AATTCATTCAAATTGATGAATTTCCGGGCGAAGGATTTCAGCTTTCCAGTGGCGTGCTCTCGGTCCGCTTaGCGCTTAGCCATAAGGTTG +
Preference number: 5 (lower is better)
Translates to: NSFKLMNFRAKDFSFPVACSRSA*RLAIRL
Trigger: CAACCTTATGGCTAAGCGCAAAGCGGACCGAGAGCA...CGCCACTGGAAAGCTGAAATCCTTCGCCCGGAAATTCATCAATTTGAATGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535508.6
ENST00000578901.1
CDS-3UTR CAA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGAAAACCTGTGGAATCTaGAGGAAAGTGAAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: ASRWRGNFERRNRETSWRKTCGI*RKVKAV
Trigger: GACAGCTTTCACTTTCCTCAAGATTCCACAGGTTTT...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGAACTCAAAAGCACAGTaGACATCCTCAGTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: SLSSGASRWRGNFERRNRNSKAQ*TSSVKS
Trigger: GGACTTCACTGAGGATGTCAACTGTGCTTTTGAGTT...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp AATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGGGGTGAATTCATTCAAATaGATGAATTTCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: NFERRNRETSWRSGVRSGVNSFK*MNFRAK
Trigger: CTTCGCCCGGAAATTCATCAATTTGAATGAATTCAC...CCCGCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAGGAGCGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 5 (lower is better)
Translates to: GNFERRNRETSWRSGVRSDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...GCTCCTGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp GGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGTCAATGGCTTGCTTCAGGTaGACCACCTTCATTATTTCA +
Preference number: 5 (lower is better)
Translates to: GEEILKEETGRHPGGQESMACFR*TTFIIS
Trigger: TGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCAT...TGACTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGATGGCTTGCTTCAGGTaGACCACCTTCATTATTTCA +
Preference number: 5 (lower is better)
Translates to: SLSSGASRWRGNFERRNRMACFR*TTFIIS
Trigger: TGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCAT...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp CACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGACTACTCGACAAGATGAGAGGATaGGGGGATGGTCCAATCATG +
Preference number: 5 (lower is better)
Translates to: HTHIHTLHLESSSEVRLLDKMRG*GDGPIM
Trigger: CATGATTGGACCATCCCCCAATCCTCTCATCTTGTC...GAGTAGTCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACGTGAAAGCTGTCCACTaGAGCTCCTCCGTACCCTCG +
Preference number: 5 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHVKAVH*SSSVPS
Trigger: CGAGGGTACGGAGGAGCTCAAGTGGACAGCTTTCAC...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CAA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGAAAACCTGTGGAATCTaGAGGAAAGTGAAAGCTGTC +
Preference number: 5 (lower is better)
Translates to: SLSSGASRWRGNFERRNRKTCGI*RKVKAV
Trigger: GACAGCTTTCACTTTCCTCAAGATTCCACAGGTTTT...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp ACACACACACACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCATTTGTACAGTCACAGTaGCAGCGCTGGTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: THTHTHTHIHTLHLESSSFVQSQ*QRWSAL
Trigger: CAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAA...TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp GCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGGTGAATTCATTCAAATaGATGAATTTCCGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: ASRWRGNFERRNRETSWRVNSFK*MNFRAK
Trigger: CTTCGCCCGGAAATTCATCAATTTGAATGAATTCAC...CCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000535508.6
CDS-3UTR CAA 90 bp TCACTCTCCTCAGGTGCCAGCAGATGGAGAGGAAATTTTGAAAGAAGAAACCGGGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 5 (lower is better)
Translates to: SLSSGASRWRGNFERRNRDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...CCGGTTTCTTCTTTCAAAATTTCCTCTCCATCTGCTGGCACCTGAGGAGAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp ACATTCTTGGAGCAGGAAGTTTGTACAGTCACAGTTGCAGCGCTGGTCAGCTTTGATGGAGAGGAAATTTaGAAAGAAGAAACCGGGAGA +
Preference number: 5 (lower is better)
Translates to: TFLEQEVCTVTVAALVSFDGEEI*KEETGR
Trigger: TCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC...AAAGCTGACCAGCGCTGCAACTGTGACTGTACAAACTTCCTGCTCCAAGAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535508.6
CDS-3UTR CAA 90 bp GATGGAGAGGAAATTTTGAAAGAAGAAACCGGGAGACATCCTGGAGGTCAGGAGACACACATACACACTTaGCATCTAGAAAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: DGEEILKEETGRHPGGQETHIHT*HLESSS
Trigger: TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGT...CTCCTGACCTCCAGGATGTCTCCCGGTTTCTTCTTTCAAAATTTCCTCTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS-3UTR CAA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACCATGTTGATTGCCCATaGGTAGTCACTCCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHHVDCP*VVTPAL
Trigger: GAGCGCTGGAGTGACTACCAATGGGCAATCAACATG...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CAA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACCCATTCTCCCAGGCATaGAGGATTTCCAAGATGGCG +
Preference number: 5 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHPFSQA*RISKMA
Trigger: CGCCATCTTGGAAATCCTCAATGCCTGGGAGAATGG...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CAA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACTTTGTACAGTCACAGTaGCAGCGCTGGTCAGCTTTG +
Preference number: 5 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHFVQSQ*QRWSAL
Trigger: CAAAGCTGACCAGCGCTGCAACTGTGACTGTACAAA...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CAA 90 bp ATATTACAAAATACACACAAACACACACACACACACACACACACACACATACACTCTGCATCCATCGTCTaGAGGATGTTTGTGACAGTG +
Preference number: 5 (lower is better)
Translates to: ILQNTHKHTHTHTHTHIHSASIV*RMFVTV
Trigger: CACTGTCACAAACATCCTCAAGACGATGGATGCAGA...GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGTATTTTGTAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
CDS-3UTR CAA 90 bp CACACACACACACACATACACACTTTGCATCTAGAAAGTTCCTCAGAGGTAAGAACACACATACACACTTaGCATCTAGAAAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HTHTHIHTLHLESSSEVRTHIHT*HLESSS
Trigger: TGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGT...TCTTACCTCTGAGGAACTTTCTAGATGCAAAGTGTGTATGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000491466.5
ENST00000535508.6
CDS GCA 72 bp GGAGGGCGCGGCGCCTGCCAGCGCTGGACCTGGGGCTaGACTGTTTCCCGCCAGGCTGCTGCTCCAGCCCAG +
Preference number: 6 (lower is better)
Translates to: GGRGACQRWTWG*TVSRQAAAPAQ
Trigger: CTGGGCTGGAGCAGCAGCCTGGCGGGAAACAGTGCAGCCCCAGGTCCAGCGCTGGCAGGCGCCGCGCCCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CCA 72 bp CCAGCCGAGTGGGGAGGGCGCGGCGCCTGCCAGCGCTaGACCTGGGGCTGCACTGTTTCCCGCCAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: PAEWGGRGACQR*TWGCTVSRQAA
Trigger: AGCAGCCTGGCGGGAAACAGTGCAGCCCCAGGTCCAGCGCTGGCAGGCGCCGCGCCCTCCCCACTCGGCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CCA 72 bp GAGTGGGGAGGGCGCGGCGCCTGCCAGCGCTGGACCTaGGGCTGCACTGTTTCCCGCCAGGCTGCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: EWGGRGACQRWT*GCTVSRQAAAP
Trigger: TGGAGCAGCAGCCTGGCGGGAAACAGTGCAGCCCCAGGTCCAGCGCTGGCAGGCGCCGCGCCCTCCCCACTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CAA 72 bp CACAGGGGAGCAAGGAACGGGCTCAGGGAGCGGGTCTaGACCCTGCCCCCACCGCCACCCTTGGAGTGGGCG +
Preference number: 6 (lower is better)
Translates to: HRGARNGLRERV*TLPPPPPLEWA
Trigger: CGCCCACTCCAAGGGTGGCGGTGGGGGCAGGGTCAAGACCCGCTCCCTGAGCCCGTTCCTTGCTCCCCTGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CAA 90 bp AGAAGTCAGCACAGGGGAGCAAGGAACGGGCTCAGGGAGCGGGTCTaGACCCTGCCCCCACCGCCACCCTTGGAGTGGGCGCCCGGGCCA +
Preference number: 6 (lower is better)
Translates to: RSQHRGARNGLRERV*TLPPPPPLEWAPGP
Trigger: TGGCCCGGGCGCCCACTCCAAGGGTGGCGGTGGGGGCAGGGTCAAGACCCGCTCCCTGAGCCCGTTCCTTGCTCCCCTGTGCTGACTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CAA 90 bp AACGGGCTCAGGGAGCGGGTCTTGACCCTGCCCCCACCGCCACCCTaGGAGTGGGCGCCCGGGCCACTGACACTAGCTTCATCTCCGAGG +
Preference number: 6 (lower is better)
Translates to: NGLRERVLTLPPPPP*EWAPGPLTLASSPR
Trigger: CCTCGGAGATGAAGCTAGTGTCAGTGGCCCGGGCGCCCACTCCAAGGGTGGCGGTGGGGGCAGGGTCAAGACCCGCTCCCTGAGCCCGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CAA 72 bp AGGGAGCGGGTCTTGACCCTGCCCCCACCGCCACCCTaGGAGTGGGCGCCCGGGCCACTGACACTAGCTTCA +
Preference number: 6 (lower is better)
Translates to: RERVLTLPPPPP*EWAPGPLTLAS
Trigger: TGAAGCTAGTGTCAGTGGCCCGGGCGCCCACTCCAAGGGTGGCGGTGGGGGCAGGGTCAAGACCCGCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS CCA 72 bp CTGCCACGGACAGACAGATGCTGCTTGCGGGACGGCTaGTGGTGGGTGTGCTGTCCCAGGGGGAAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: LPRTDRCCLRDG*WWVCCPRGKEA
Trigger: GGCCTCCTTCCCCCTGGGACAGCACACCCACCACCAGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS CCA 72 bp CAAACAGCAGGGCCCGGACGGAGGCCGGTTTGGCTGTaGAAGGACGGGAAGGCTGAGCTCCCAGACGAGGGC +
Preference number: 6 (lower is better)
Translates to: QTAGPGRRPVWL*KDGKAELPDEG
Trigger: GCCCTCGTCTGGGAGCTCAGCCTTCCCGTCCTTCCACAGCCAAACCGGCCTCCGTCCGGGCCCTGCTGTTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580921.5
CDS CAA 90 bp TGGCGGCCCAGGGGCAGGCTGAGGTCCGTGATGGCCAGAACCACCTaGGGGCTGGACATGGCTGACACCTTCACCAGTTCCGACACCTGC +
Preference number: 6 (lower is better)
Translates to: WRPRGRLRSVMARTT*GLDMADTFTSSDTC
Trigger: GCAGGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCATCACGGACCTCAGCCTGCCCCTGGGCCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS GCA 72 bp GGGAAGGTGGTACTCACGGTGGTGAAGGGCATGAACTaGAGGACGCTGCCACGGCCACCCTGCTCCAGGCAG +
Preference number: 6 (lower is better)
Translates to: GKVVLTVVKGMN*RTLPRPPCSRQ
Trigger: CTGCCTGGAGCAGGGTGGCCGTGGCAGCGTCCTGCAGTTCATGCCCTTCACCACCGTGAGTACCACCTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS GCA 72 bp AGTTCCGACACCTGCCACGGACAGACAGATGCTGCTTaGGGGACGGCTGGTGGTGGGTGTGCTGTCCCAGGG +
Preference number: 6 (lower is better)
Translates to: SSDTCHGQTDAA*GTAGGGCAVPG
Trigger: CCCTGGGACAGCACACCCACCACCAGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAGGTGTCGGAACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS GCA 72 bp CACCAGTTCCGACACCTGCCACGGACAGACAGATGCTaGTTGCGGGACGGCTGGTGGTGGGTGTGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: HQFRHLPRTDRC*LRDGWWWVCCP
Trigger: GGGACAGCACACCCACCACCAGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAGGTGTCGGAACTGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS CAA 72 bp CAGTTCCGACACCTGCCACGGACAGACAGATGCTGCTaGCGGGACGGCTGGTGGTGGGTGTGCTGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: QFRHLPRTDRCC*RDGWWWVCCPR
Trigger: CCTGGGACAGCACACCCACCACCAGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAGGTGTCGGAACTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS CAA 90 bp CACCTTCACCAGTTCCGACACCTGCCACGGACAGACAGATGCTGCTaGCGGGACGGCTGGTGGTGGGTGTGCTGTCCCAGGGGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: HLHQFRHLPRTDRCC*RDGWWWVCCPRGKE
Trigger: CTCCTTCCCCCTGGGACAGCACACCCACCACCAGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAGGTGTCGGAACTGGTGAAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS GCA 72 bp GGTGGCGGCCAGCCTGAGCACTACATACTGCAGCCTTaGTCCCCAGGGTTCCGGCCAAACCTGATCACCGAG +
Preference number: 6 (lower is better)
Translates to: GGGQPEHYILQP*SPGFRPNLITE
Trigger: CTCGGTGATCAGGTTTGGCCGGAACCCTGGGGAGCAAGGCTGCAGTATGTAGTGCTCAGGCTGGCCGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585306.5
CDS CCA 72 bp AGATGTCAAACAGCAGGGCCCGGACGGAGGCCGGTTTaGCTGTGGAAGGACGGGAAGGCTGAGCTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: RCQTAGPGRRPV*LWKDGKAELPD
Trigger: GTCTGGGAGCTCAGCCTTCCCGTCCTTCCACAGCCAAACCGGCCTCCGTCCGGGCCCTGCTGTTTGACATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580921.5
CDS TCA 72 bp GTGCATCTCCTAATGAGGGTGCCACACTGCTCGGCCTaGCTCCGGAGCTGCGGGTTGCTGAGATTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: VHLLMRVPHCSA*LRSCGLLRLAR
Trigger: CCTGGCCAATCTCAGCAACCCGCAGCTCCGGAGTCAGGCCGAGCAGTGTGGCACCCTCATTAGGAGATGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585249.1
CDS GCA 72 bp CTTCACCAGTTCCGACACCTGCCACGGACAGACAGATaGTGCTTGCGGGACGGCTGGTGGTGGGTGTGCTGT +
Preference number: 6 (lower is better)
Translates to: LHQFRHLPRTDR*CLRDGWWWVCC
Trigger: ACAGCACACCCACCACCAGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAGGTGTCGGAACTGGTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS CCA 72 bp GGATCGGTCTGCTGTGGGACGGAGCAGATGGAGCGCTaGGAAACAGCCTGCCGAGTGCAAAAGTGGTGCTCC +
Preference number: 6 (lower is better)
Translates to: GSVCCGTEQMER*ETACRVQKWCS
Trigger: GGAGCACCACTTTTGCACTCGGCAGGCTGTTTCCCAGCGCTCCATCTGCTCCGTCCCACAGCAGACCGATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422942.6
ENST00000579364.1
CDS TCA 72 bp CGTGATGGCCAGAACCACCTTGGGGCTGGACATGGCTaGCACCTTCACCAGTTCCGACACCTGCCACGGACA +
Preference number: 6 (lower is better)
Translates to: RDGQNHLGAGHG*HLHQFRHLPRT
Trigger: TGTCCGTGGCAGGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAGCCCCAAGGTGGTTCTGGCCATCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS TCA 72 bp CTGAGCAGGTGGCAGCGGTGGCGGCCAGCTTTGAGGTaGAAGAAATGGAGCTTTGCCTGCTCCCCTGCTGTC +
Preference number: 6 (lower is better)
Translates to: LSRWQRWRPALR*KKWSFACSPAV
Trigger: GACAGCAGGGGAGCAGGCAAAGCTCCATTTCTTTCACCTCAAAGCTGGCCGCCACCGCTGCCACCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582023.5
CDS GCA 72 bp AGACAGGCCTCATGCCACTTCATCTGCCTGCGGGTGTaGAGAGAAGTCAGCACAGGGGAGCAAGGAACGGGC +
Preference number: 6 (lower is better)
Translates to: RQASCHFICLRV*REVSTGEQGTG
Trigger: GCCCGTTCCTTGCTCCCCTGTGCTGACTTCTCTGCACACCCGCAGGCAGATGAAGTGGCATGAGGCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS GCA 72 bp CTGGACATGGCTGACACCTTCACCAGTTCCGACACCTaGCACGGACAGACAGATGCTGCTTGCGGGACGGCT +
Preference number: 6 (lower is better)
Translates to: LDMADTFTSSDT*HGQTDAACGTA
Trigger: AGCCGTCCCGCAAGCAGCATCTGTCTGTCCGTGGCAGGTGTCGGAACTGGTGAAGGTGTCAGCCATGTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579364.1
CDS GCA 72 bp GGAAGTCCAGCAATGCCAGCCAGAGGCATCATGTGCTaGCTATCCAGCCTCACGGGTCACAGCATCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GSPAMPARGIMC*LSSLTGHSIRA
Trigger: GGCCCTGATGCTGTGACCCGTGAGGCTGGATAGGCAGCACATGATGCCTCTGGCTGGCATTGCTGGACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS CCA 72 bp AGCCACAGCCTAAGGCCCTCCACCTGGAGCCATTCCTaGATCATCCTGGAGCCCCTGTCGCATACCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SHSLRPSTWSHS*IILEPLSHTSE
Trigger: CTCTGAGGTATGCGACAGGGGCTCCAGGATGATCCAGGAATGGCTCCAGGTGGAGGGCCTTAGGCTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582023.5
CDS CCA 72 bp TTCTGTGCCTGTAGCCACAGCCTAAGGCCCTCCACCTaGAGCCATTCCTGGATCATCCTGGAGCCCCTGTCG +
Preference number: 6 (lower is better)
Translates to: FCACSHSLRPST*SHSWIILEPLS
Trigger: CGACAGGGGCTCCAGGATGATCCAGGAATGGCTCCAGGTGGAGGGCCTTAGGCTGTGGCTACAGGCACAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582023.5
CDS GCA 72 bp ACACTGGACATTGGCTCCCAAGCACCAGCCCCTACTTaGCAGGATCCCCCTCCCATGGAAGTCCAGCAATGC +
Preference number: 6 (lower is better)
Translates to: TLDIGSQAPAPT*QDPPPMEVQQC
Trigger: GCATTGCTGGACTTCCATGGGAGGGGGATCCTGGCAAGTAGGGGCTGGTGCTTGGGAGCCAATGTCCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS CCA 72 bp CTGCTCATGGATCGGTCTGCTGTGGGACGGAGCAGATaGAGCGCTGGGAAACAGCCTGCCGAGTGCAAAAGT +
Preference number: 6 (lower is better)
Translates to: LLMDRSAVGRSR*SAGKQPAECKS
Trigger: ACTTTTGCACTCGGCAGGCTGTTTCCCAGCGCTCCATCTGCTCCGTCCCACAGCAGACCGATCCATGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422942.6
ENST00000579364.1
CDS CCA 72 bp TCATGGTGCCCTCGAGCAGGATCACGGCGTGGACAGTaGGGAAGCCGGTCTTGTGCATCTCCTAATGAGGGT +
Preference number: 6 (lower is better)
Translates to: SWCPRAGSRRGQ*GSRSCASPNEG
Trigger: ACCCTCATTAGGAGATGCACAAGACCGGCTTCCCCACTGTCCACGCCGTGATCCTGCTCGAGGGCACCATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585249.1
CDS CAA 72 bp AGTCCCTGGGATGTGTGCAATGAGGCCTCCTCTAGTTaGGCGATGTGCAGCAGGGCCCGGTTCTTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: SPWDVCNEASSS*AMCSRARFLVL
Trigger: CAGCACCAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTCATTGCACACATCCCAGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479829.5
ENST00000501516.7
ENST00000580008.5
CDS CAA 72 bp GGGTCACAGCATCAGGGCCGTCAAGGAGGCGGGGCCTaGTCTGTCATCCCCAATCTAGCTCCTGAGTGTCTA +
Preference number: 6 (lower is better)
Translates to: GSQHQGRQGGGA*SVIPNLAPECL
Trigger: TAGACACTCAGGAGCTAGATTGGGGATGACAGACAAGGCCCCGCCTCCTTGACGGCCCTGATGCTGTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS CAA 90 bp CAGCCTCACGGGTCACAGCATCAGGGCCGTCAAGGAGGCGGGGCCTaGTCTGTCATCCCCAATCTAGCTCCTGAGTGTCTATGGTCATAC +
Preference number: 6 (lower is better)
Translates to: QPHGSQHQGRQGGGA*SVIPNLAPECLWSY
Trigger: GTATGACCATAGACACTCAGGAGCTAGATTGGGGATGACAGACAAGGCCCCGCCTCCTTGACGGCCCTGATGCTGTGACCCGTGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS CAA 90 bp AGCATCCTCAACACTGGACATTGGCTCCCAAGCACCAGCCCCTACTaGCCAGGATCCCCCTCCCATGGAAGTCCAGCAATGCCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: SILNTGHWLPSTSPY*PGSPSHGSPAMPAR
Trigger: TCTGGCTGGCATTGCTGGACTTCCATGGGAGGGGGATCCTGGCAAGTAGGGGCTGGTGCTTGGGAGCCAATGTCCAGTGTTGAGGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS TCA 72 bp CCAGCCTTGGCAACTAGCGAGACCTCATCTATGTGGTaGGCACACAGGGCCAGGGGCCGATCTTGGTACTTC +
Preference number: 6 (lower is better)
Translates to: PALATSETSSMW*AHRARGRSWYF
Trigger: GAAGTACCAAGATCGGCCCCTGGCCCTGTGTGCTCACCACATAGATGAGGTCTCGCTAGTTGCCAAGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470126.1
CDS TCA 72 bp GGAATGGAGACAGGCTGCATTGACCAGGGCATGAGCTaGGCAGTAGCTGGGCGCTGGGGCTACACATGTTCA +
Preference number: 6 (lower is better)
Translates to: GMETGCIDQGMS*AVAGRWGYTCS
Trigger: TGAACATGTGTAGCCCCAGCGCCCAGCTACTGCTCAGCTCATGCCCTGGTCAATGCAGCCTGTCTCCATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584782.5
CDS GCA 72 bp GATGTGTGCAATGAGGCCTCCTCTAGTTTGGCGATGTaGAGCAGGGCCCGGTTCTTGGTGCTGCTGAGGGTT +
Preference number: 6 (lower is better)
Translates to: DVCNEASSSLAM*SRARFLVLLRV
Trigger: AACCCTCAGCAGCACCAAGAACCGGGCCCTGCTGCACATCGCCAAACTAGAGGAGGCCTCATTGCACACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479829.5
ENST00000501516.7
ENST00000580008.5
CDS GCA 72 bp TCCAAGATGGCGGCTGAGATGCTGAGACAGGCCTCATaGCACTTCATCTGCCTGCGGGTGTGCAGAGAAGTC +
Preference number: 6 (lower is better)
Translates to: SKMAAEMLRQAS*HFICLRVCREV
Trigger: GACTTCTCTGCACACCCGCAGGCAGATGAAGTGGCATGAGGCCTGTCTCAGCATCTCAGCCGCCATCTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495586.1
CDS GCA 72 bp CATGGAAGTCCAGCAATGCCAGCCAGAGGCATCATGTaGTGCCTATCCAGCCTCACGGGTCACAGCATCAGG +
Preference number: 6 (lower is better)
Translates to: HGSPAMPARGIM*CLSSLTGHSIR
Trigger: CCTGATGCTGTGACCCGTGAGGCTGGATAGGCAGCACATGATGCCTCTGGCTGGCATTGCTGGACTTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS CCA 72 bp CTGGGTTCCAGACTCAGCATCCTCAACACTGGACATTaGCTCCCAAGCACCAGCCCCTACTTGCCAGGATCC +
Preference number: 6 (lower is better)
Translates to: LGSRLSILNTGH*LPSTSPYLPGS
Trigger: GGATCCTGGCAAGTAGGGGCTGGTGCTTGGGAGCCAATGTCCAGTGTTGAGGATGCTGAGTCTGGAACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581054.1
CDS CAA 90 bp TCTGCGCCGGCGAGGAAACTAAGGGACTCGTCTAGTCGGCCCGCATaGTTCTTCTCCTTTAAGGGAGGACATCCAGGAGCTGAGGCACTA +
Preference number: 6 (lower is better)
Translates to: SAPARKLRDSSSRPA*FFSFKGGHPGAEAL
Trigger: TAGTGCCTCAGCTCCTGGATGTCCTCCCTTAAAGGAGAAGAACAATGCGGGCCGACTAGACGAGTCCCTTAGTTTCCTCGCCGGCGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580302.1
CDS TCA 72 bp GCTTGCTTCAGGTTGACCACCTTCATTATTTCACTCTaGGCAGGTGGCAGCGGTGGCGGCCAGCGCACAATC +
Preference number: 6 (lower is better)
Translates to: ACFRLTTFIISL*AGGSGGGQRTI
Trigger: GATTGTGCGCTGGCCGCCACCGCTGCCACCTGCTCAGAGTGAAATAATGAAGGTGGTCAACCTGAAGCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356271.7
ENST00000394128.7
ENST00000479829.5
ENST00000535508.6
CDS GCA 72 bp GATGCCCCCAGGCCTAGGCACAGGACACAAGCACCCTaGACCTCCGCTAGCTCAACAGAAAAAGATGCCATA +
Preference number: 6 (lower is better)
Translates to: DAPRPRHRTQAP*TSASSTEKDAI
Trigger: TATGGCATCTTTTTCTGTTGAGCTAGCGGAGGTGCAGGGTGCTTGTGTCCTGTGCCTAGGCCTGGGGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584077.1
CDS GCA 72 bp GCTAAGAAGGGCTCGGCACAGTCCGATGCATTCCTCTaGTTTGCCGTGACAGCTCAGACGGTCACAAAACAT +
Preference number: 6 (lower is better)
Translates to: AKKGSAQSDAFL*FAVTAQTVTKH
Trigger: ATGTTTTGTGACCGTCTGAGCTGTCACGGCAAAGCAGAGGAATGCATCGGACTGTGCCGAGCCCTTCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000428757.6
ENST00000479829.5
ENST00000501516.7
ENST00000535071.6
ENST00000537674.6
ENST00000543759.6
ENST00000580008.5
ENST00000580517.5
ENST00000580885.5
ENST00000582023.5
ENST00000585306.5
CDS GCA 72 bp CACAGGGCCAGGGGCCGATCTTGGTACTTCCTAAGCTaGTTACTCCTCACAACACCCCATTTACAGATGAGG +
Preference number: 6 (lower is better)
Translates to: HRARGRSWYFLS*LLLTTPHLQMR
Trigger: CCTCATCTGTAAATGGGGTGTTGTGAGGAGTAAGCAGCTTAGGAAGTACCAAGATCGGCCCCTGGCCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470126.1
CDS CAA 72 bp ATCTATGTGGTGAGCACACAGGGCCAGGGGCCGATCTaGGTACTTCCTAAGCTGCTTACTCCTCACAACACC +
Preference number: 6 (lower is better)
Translates to: IYVVSTQGQGPI*VLPKLLTPHNT
Trigger: GGTGTTGTGAGGAGTAAGCAGCTTAGGAAGTACCAAGATCGGCCCCTGGCCCTGTGTGCTCACCACATAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470126.1
CDS CAA 72 bp GCGAGGAAACTAAGGGACTCGTCTAGTCGGCCCGCATaGTTCTTCTCCTTTAAGGGAGGACATCCAGGAGCT +
Preference number: 6 (lower is better)
Translates to: ARKLRDSSSRPA*FFSFKGGHPGA
Trigger: AGCTCCTGGATGTCCTCCCTTAAAGGAGAAGAACAATGCGGGCCGACTAGACGAGTCCCTTAGTTTCCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580302.1
CDS CAA 90 bp CGAGACCTCATCTATGTGGTGAGCACACAGGGCCAGGGGCCGATCTaGGTACTTCCTAAGCTGCTTACTCCTCACAACACCCCATTTACA +
Preference number: 6 (lower is better)
Translates to: RDLIYVVSTQGQGPI*VLPKLLTPHNTPFT
Trigger: TGTAAATGGGGTGTTGTGAGGAGTAAGCAGCTTAGGAAGTACCAAGATCGGCCCCTGGCCCTGTGTGCTCACCACATAGATGAGGTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470126.1
CDS CCA 72 bp CCAGGATCTCTCCAAGTTTCAAGAGAGAATGCTCGATaGCAGTCCAAGAAGCTGTTGGTTGATTGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: PGSLQVSRENAR*QSKKLLVDWLG
Trigger: CCCGAGCCAATCAACCAACAGCTTCTTGGACTGCCATCGAGCATTCTCTCTTGAAACTTGGAGAGATCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000501516.7
CDS GCA 72 bp AAGATGAGAGGATTGGGGGATGGTCCAATCATGGCCTaGTCTAGTAACGCATCTGCCAGGTTGAGAATATCC +
Preference number: 6 (lower is better)
Translates to: KMRGLGDGPIMA*SSNASARLRIS
Trigger: GGATATTCTCAACCTGGCAGATGCGTTACTAGAGCAGGCCATGATTGGACCATCCCCCAATCCTCTCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000428757.6
ENST00000479829.5
ENST00000501516.7
ENST00000535508.6
ENST00000537674.6
ENST00000543759.6
ENST00000578161.2
ENST00000580517.5
ENST00000581054.1
ENST00000582023.5
ENST00000585306.5
ENST00000614384.4
CDS GCA 72 bp AAGATGAGAGGATTGGGGGATGGTCCAATCATGGCCTaGTCTAGTAACGCATCGCACAATCCAGTTCTAGGT +
Preference number: 6 (lower is better)
Translates to: KMRGLGDGPIMA*SSNASHNPVLG
Trigger: ACCTAGAACTGGATTGTGCGATGCGTTACTAGAGCAGGCCATGATTGGACCATCCCCCAATCCTCTCATCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535071.6
CDS CCA 72 bp CGGTCACAAAACATGTCCATGATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAAAAGTCATCAAACTGG +
Preference number: 6 (lower is better)
Translates to: RSQNMSMMSSNA*THRSREKSSNW
Trigger: CCAGTTTGATGACTTTTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACATCATGGACATGTTTTGTGACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000356271.7
ENST00000394127.6
ENST00000428757.6
ENST00000543759.6
ENST00000580008.5
ENST00000580517.5
CDS CAA 72 bp GTCACTCCAGCGCTCCTTCCAGGCTTGCAAAATGGCTaGCTTCAGGTTGACCACCTTCATTATTTCACTCTG +
Preference number: 6 (lower is better)
Translates to: VTPALLPGLQNG*LQVDHLHYFTL
Trigger: CAGAGTGAAATAATGAAGGTGGTCAACCTGAAGCAAGCCATTTTGCAAGCCTGGAAGGAGCGCTGGAGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356271.7
ENST00000394126.5
ENST00000394127.6
ENST00000394128.7
ENST00000428757.6
ENST00000479829.5
ENST00000535508.6
ENST00000537674.6
ENST00000543759.6
ENST00000578161.2
ENST00000580302.1
ENST00000580517.5
ENST00000581054.1
ENST00000582023.5
ENST00000585306.5
ENST00000614384.4
CDS CAA 90 bp GGTAGGCATCGCCATTTTGGCACTTGTCAAGAAGCTCACTTTCTATaGGCTGGGAGTAACAAACGCCAACCAATAGAAATGCAGCAAGGA +
Preference number: 6 (lower is better)
Translates to: GRHRHFGTCQEAHFL*AGSNKRQPIEMQQG
Trigger: TCCTTGCTGCATTTCTATTGGTTGGCGTTTGTTACTCCCAGCCAATAGAAAGTGAGCTTCTTGACAAGTGCCAAAATGGCGATGCCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580302.1
CDS CCA 72 bp CGGTCACAAAACATGTCCATGATGTCCAGCAATGCCTaGACACACAGGTCCCGAGAAAAGTCATCAAACTTA +
Preference number: 6 (lower is better)
Translates to: RSQNMSMMSSNA*THRSREKSSNL
Trigger: TAAGTTTGATGACTTTTCTCGGGACCTGTGTGTCCAGGCATTGCTGGACATCATGGACATGTTTTGTGACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000394126.5
ENST00000394128.7
ENST00000479829.5
ENST00000501516.7
ENST00000535071.6
ENST00000537674.6
ENST00000578161.2
ENST00000580885.5
ENST00000582023.5
ENST00000585306.5
CDS CAA 72 bp CGCCATTTTGGCACTTGTCAAGAAGCTCACTTTCTATaGGCTGGGAGTAACAAACGCCAACCAATAGAAATG +
Preference number: 6 (lower is better)
Translates to: RHFGTCQEAHFL*AGSNKRQPIEM
Trigger: CATTTCTATTGGTTGGCGTTTGTTACTCCCAGCCAATAGAAAGTGAGCTTCTTGACAAGTGCCAAAATGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580302.1