RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED23 (Homo sapiens)

Ensembl gene IDs: ENSG00000112282

Ensembl transcript IDs: ENST00000354577.8, ENST00000368053.8, ENST00000368058.5, ENST00000368060.7, ENST00000368068.8, ENST00000479213.1, ENST00000484885.1, ENST00000489888.1, ENST00000539158.1

Found 627 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCAGTGCTCTCGACACAAAGATGGAGCTGGTTCTGGTTTGTTTGTaGAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCT +
Preference number: 1 (lower is better)
Translates to: SSALDTKMELVLVCL*NCSQSMKMTQELNS
Trigger: AGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAGCACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
3UTR GCA 90 bp GCTCTCGACACAAAGATGGAGCTGGTTCTGGTTTGTTTGTGCAACTaGAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGTAATG +
Preference number: 1 (lower is better)
Translates to: ALDTKMELVLVCLCN*SQSMKMTQELNSVM
Trigger: CATTACAGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
3UTR CCA 90 bp GAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTaGGCAGCGTTTTGCTTCCTCTTAATTTGGAACCCTTGCTGTGTA +
Preference number: 1 (lower is better)
Translates to: ELKLLRLIFSRFLRI*AAFCFLLIWNPCCV
Trigger: TACACAGCAAGGGTTCCAAATTAAGAGGAAGCAAAACGCTGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
3UTR TCA 90 bp AAACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTaGTCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACG +
Preference number: 1 (lower is better)
Translates to: KQSEYHHCFYYITTV*SHSDLKGLSPLSKT
Trigger: CGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
3UTR CAA 90 bp GAGAGCAGTGCTCTCGACACAAAGATGGAGCTGGTTCTGGTTTGTTaGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAAC +
Preference number: 2 (lower is better)
Translates to: ESSALDTKMELVLVC*CNCSQSMKMTQELN
Trigger: GTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAGCACTGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
3UTR-3UTR GCA 90 bp CCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGAGCTGGGTTTGTTTGTGCAACTaGAGCCAAAGTATGAAGATG +
Preference number: 2 (lower is better)
Translates to: PNAVISLRAVLSTQRWSWVCLCN*SQSMKM
Trigger: CATCTTCATACTTTGGCTGCAGTTGCACAAACAAAC...CCAGCTCCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
3UTR-3UTR CCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAATGCTTCCTCTTAATTTaGAACCCTTGCTGTGTACTC +
Preference number: 2 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQCFLLI*NPCCVL
Trigger: GAGTACACAGCAAGGGTTCCAAATTAAGAGGAAGCA...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
3UTR GCA 72 bp ACAAAGATGGAGCTGGTTCTGGTTTGTTTGTGCAACTaGAGCCAAAGTATGAAGATGACTCAGGAGCTGAAC +
Preference number: 3 (lower is better)
Translates to: TKMELVLVCLCN*SQSMKMTQELN
Trigger: GTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
3UTR CCA 72 bp CTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTaGGCAGCGTTTTGCTTCCTCTTAATTTGGAACCCT +
Preference number: 3 (lower is better)
Translates to: LLRLIFSRFLRI*AAFCFLLIWNP
Trigger: AGGGTTCCAAATTAAGAGGAAGCAAAACGCTGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
3UTR-3UTR CAA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAATTGCTTCCTCTTAATTaGGAACCCTTGCTGTGTACT +
Preference number: 3 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQLLPLN*EPLLCT
Trigger: AGTACACAGCAAGGGTTCCAAATTAAGAGGAAGCAA...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
3UTR-3UTR CAA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACATTGAAACTACTAAGGTaGATTTTCTCCAGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: NGFMKPPDFLTATSCESTLKLLR*IFSRFL
Trigger: GAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAA...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
3UTR-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCAGATTTAAAAGGTTaGAGTCCACTCTCAAAGACG +
Preference number: 3 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSDLKG*SPLSKT
Trigger: CGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000368068.8
3UTR TCA 72 bp GAATATCATCACTGCTTCTACTATATCACTACAGTGTaGTCGCATTCAGATTTAAAAGGTTTGAGTCCACTC +
Preference number: 3 (lower is better)
Translates to: EYHHCFYYITTV*SHSDLKGLSPL
Trigger: GAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
3UTR-3UTR CAA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACAATATGAAGCCTTGTTaGCTCCTACAATGCAACAAA +
Preference number: 3 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNNMKPC*LLQCNK
Trigger: TTTGTTGCATTGTAGGAGCAAACAAGGCTTCATATT...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGTGCTCTCGACACAAAGATGGAGCTGGTTCTGGTTTGTTTGTGCAACTGCAGACCAGATCCACCAACTaGTCCTCCAGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QCSRHKDGAGSGLFVQLQTRSTN*SSSTGQ
Trigger: CTGCCCTGTGCTGGAGGACCAGTTGGTGGATCTGGT...CTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAACCCGCCTTTCCAGGGTaGCCGGCAAGGCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQPAFPG*PARPGS
Trigger: TGATCCGGGCCTTGCCGGGCACCCTGGAAAGGCGGG...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCCGCCTTTCCAGGGTaGCCGGCAAGGCCCGGATCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPAFPG*PARPGS
Trigger: TGATCCGGGCCTTGCCGGGCACCCTGGAAAGGCGGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TGCTCTCGACACAAAGATGGAGCTGGTTCTGGTTTGTTTGTGCAACTGCAGCCATGCTGCCACAGGAGTTaGCTTGTTCCCCCATCGTCA +
Preference number: 4 (lower is better)
Translates to: CSRHKDGAGSGLFVQLQPCCHRS*LVPPSS
Trigger: TGACGATGGGGGAACAAGCCAACTCCTGTGGCAGCA...TGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCCCAGCGCTTTACCTaGAGCGTTCCCTCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPQRFT*SVPSRA
Trigger: GGCTCGGGAGGGAACGCTCCAGGTAAAGCGCTGGGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGAGCTGGAGGAAGCGTGTAAACTaGGGTTGTACCTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: PNAVISLRAVLSTQRWSWRKRVN*GCTSEL
Trigger: TAGCTCAGAGGTACAACCGCAGTTTACACGCTTCCT...CCAGCTCCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGAGAGACCCACTGTTCATaGCTTGTGGAGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRETHCS*LVEALQ
Trigger: CTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTC...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATCCCCAGCGCTTTACCTaGAGCGTTCCCTCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYPQRFT*SVPSRA
Trigger: GGCTCGGGAGGGAACGCTCCAGGTAAAGCGCTGGGG...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR GCA 90 bp GAGCTGGTTCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGCCACCTCTTCGAAAATaGTCTGCAGTTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ELVLVCLCNCSQSMKMTQPPLRK*SAVASP
Trigger: TGGAGACGCAACTGCAGAGCATTTTCGAAGAGGTGG...CTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAGGCTTGTGGAGGCACTaGAGCTGGCTCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQGLWRH*SWLHLA
Trigger: AGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCC...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGCTTGTGGAGGCACTaGAGCTGGCTCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGLWRH*SWLHLA
Trigger: AGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAACAAACCAGCCTGGGTaGAAGGAGACCAGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTTNQPG*KETSLN
Trigger: GTTGAGACTGGTCTCCTTCCACCCAGGCTGGTTTGT...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACCAGATCCACCAACTaGTCCTCCAGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTRSTN*SSSTGQ
Trigger: CTGCCCTGTGCTGGAGGACCAGTTGGTGGATCTGGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAGTAACATGGAGAGCATaGGCAGCTGGGTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTVTWRA*AAGLGN
Trigger: GTTTCCCAACCCAGCTGCCCATGCTCTCCATGTTAC...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACATCCACACAAGTAACATaGAGAGCATGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTSTQVT*RAWAAG
Trigger: CCCAGCTGCCCATGCTCTCCATGTTACTTGTGTGGA...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACATGGAGGCACTGCAGCTaGCTCCATCTTGCTAATGTG +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTWRHCS*LHLANV
Trigger: CACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCA...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCACAGCGCTGCTTGTGCTaGGCAATGTTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAQRCLC*AMFKVC
Trigger: GCAGACCTTGAACATTGCTCAGCACAAGCAGCGCTG...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp AACTGCGGTTGTACCTCTGAGCTACCTAATGCTGTTATAAGCCTGAGAGCAGTGTGCAAAGGCATGGGTTaGCTGGGGTTTGTTAATATC +
Preference number: 4 (lower is better)
Translates to: NCGCTSELPNAVISLRAVCKGMG*LGFVNI
Trigger: GATATTAACAAACCCCAGTCAACCCATGCCTTTGCA...CACTGCTCTCAGGCTTATAACAGCATTAGGTAGCTCAGAGGTACAACCGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR TCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAGCTTCATTTCCTTCGTaGCTACGCATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAASFPS*LRMARQ
Trigger: CTGCCTGGCCATGCGTAGTCACGAAGGAAATGAAGC...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAGCTTCATTTCCTTCGTaGCTACGCATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGASFPS*LRMARQ
Trigger: CTGCCTGGCCATGCGTAGTCACGAAGGAAATGAAGC...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGCTTCATTTCCTTCGTaGCTACGCATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKASFPS*LRMARQ
Trigger: CTGCCTGGCCATGCGTAGTCACGAAGGAAATGAAGC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp GAGCTACCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGACCAGTGTGGAAGTTTaGCTTCAGGATACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ELPNAVISLRAVLSTQRWTSVEV*LQDTVS
Trigger: GGAAACTGTATCCTGAAGGCAAACTTCCACACTGGT...CCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGGTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp TTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGTAATGGGGCAGCGCTGCTTGTaGTGCTTATTTAAACCTAGC +
Preference number: 4 (lower is better)
Translates to: LCNCSQSMKMTQELNSVMGQRCL*CLFKPS
Trigger: GCTAGGTTTAAATAAGCAGCACAAGCAGCGCTGCCC...CATTACAGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CAGGAGCTGAACTCTGTAATGAGGCTGAATATGATGCATCCGGTAGCTAAACATATTCACAAACCAGCCTaGGTGGAAGGAGACCAGTCT +
Preference number: 4 (lower is better)
Translates to: QELNSVMRLNMMHPVAKHIHKPA*VEGDQS
Trigger: AGACTGGTCTCCTTCCACCCAGGCTGGTTTGTGAAT...ATGTTTAGCTACCGGATGCATCATATTCAGCCTCATTACAGAGTTCAGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp GATGACTCAGGAGCTGAACTCTGTAATGAGGCTGAATATGATGCATCCGGTAGCTACAGCGACCACAAATaGAGTTTATCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DDSGAELCNEAEYDASGSYSDHK*SLSLLW
Trigger: CCACAGCAAGGATAAACTCCATTTGTGGTCGCTGTA...GCTACCGGATGCATCATATTCAGCCTCATTACAGAGTTCAGCTCCTGAGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp AACTGCGGTTGTACCTCTGAGCTACCTAATGCTGTTATAAGCCTGAGAGCAGTGTGCAGACCATATCCCTaGAATAAGGCTGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: NCGCTSELPNAVISLRAVCRPYP*NKAAPI
Trigger: TATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCA...CACTGCTCTCAGGCTTATAACAGCATTAGGTAGCTCAGAGGTACAACCGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCACCAGATCCACCAACTaGTCCTCCAGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLTRSTN*SSSTGQ
Trigger: CTGCCCTGTGCTGGAGGACCAGTTGGTGGATCTGGT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAATGCTGCCACAGGAGTTaGCTTGTTCCCCCATCGTCA +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQCCHRS*LVPPSS
Trigger: TGACGATGGGGGAACAAGCCAACTCCTGTGGCAGCA...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGCTGCCACAGGAGTTaGCTTGTTCCCCCATCGTCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKCCHRS*LVPPSS
Trigger: TGACGATGGGGGAACAAGCCAACTCCTGTGGCAGCA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAACTGTTCATGGCTTGTaGAGGCACTGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWATVHGL*RHCSWL
Trigger: GAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACTGTTCATGGCTTGTaGAGGCACTGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTVHGL*RHCSWL
Trigger: GAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGAGACCCACTGTTCATaGCTTGTGGAGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKETHCS*LVEALQ
Trigger: CTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAGAGACCCACTGTTCATaGCTTGTGGAGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGETHCS*LVEALQ
Trigger: CTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTC...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
3UTR CAA 72 bp GCTCTCGACACAAAGATGGAGCTGGTTCTGGTTTGTTaGTGCAACTGCAGCCAAAGTATGAAGATGACTCAG +
Preference number: 4 (lower is better)
Translates to: ALDTKMELVLVC*CNCSQSMKMTQ
Trigger: CTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR TCA 90 bp GAGCTGGTTCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGATCCCCCATGCATGTaGTTTGAAAACAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ELVLVCLCNCSQSMKMTQDPPCM*FENSWQ
Trigger: TTGCCAACTGTTTTCAAATCACATGCATGGGGGATC...CTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR TCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAACCCAACTTCTTTGCCTaGAACTGCCAAGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQPNFFA*NCQGHE
Trigger: CTCATGGCCTTGGCAGTTTCAGGCAAAGAAGTTGGG...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCCAACTTCTTTGCCTaGAACTGCCAAGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPNFFA*NCQGHE
Trigger: CTCATGGCCTTGGCAGTTTCAGGCAAAGAAGTTGGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATACAGCCACGAGCTGTaGATCCACACATGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAYSHEL*IHTCQQ
Trigger: TTGCTGGCATGTGTGGATTCACAGCTCGTGGCTGTA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp ATGACTCAGGAGCTGAACTCTGTAATGAGGCTGAATATGATGCATCCGGTAGCTTCTTCGAAAATGCTCTaGAGTTGCGTCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: MTQELNSVMRLNMMHPVASSKML*SCVSIC
Trigger: ACAGATGGAGACGCAACTGCAGAGCATTTTCGAAGA...AGCTACCGGATGCATCATATTCAGCCTCATTACAGAGTTCAGCTCCTGAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTTGCTGCCAGAAGCTaGTGTACAACAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLAARS*CTTAEL
Trigger: GAGCTCTGCTGTTGTACAGCAGCTTCTGGCAGCAAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGTATGAAGATGACTCAGGAGCTGAACTCTGTAATGAGGCTGAATATGATGCACTTGCTGCCAGAAGCTaGTGTACAACAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KYEDDSGAELCNEAEYDALAARS*CTTAEL
Trigger: GAGCTCTGCTGTTGTACAGCAGCTTCTGGCAGCAAG...TGCATCATATTCAGCCTCATTACAGAGTTCAGCTCCTGAGTCATCTTCATACTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp CTGGTTCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGTATAACCTCTCTTGCTaGCAGAAGCTGCTGTACAAC +
Preference number: 4 (lower is better)
Translates to: LVLVCLCNCSQSMKMTQEYNLSC*QKLLYN
Trigger: GTTGTACAGCAGCTTCTGGCAGCAAGAGAGGTTATA...CTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp CCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGAGCTGGCTTCCAGAAATGAATTaGAGGAGAACCCACATAAGA +
Preference number: 4 (lower is better)
Translates to: PNAVISLRAVLSTQRWSWLPEMN*RRTHIR
Trigger: TCTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAG...CCAGCTCCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp GAGCTACCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGGTTCTGGTTTGTTTGTaGAACTGCAGCCAAAGTATG +
Preference number: 4 (lower is better)
Translates to: ELPNAVISLRAVLSTQRWVLVCL*NCSQSM
Trigger: CATACTTTGGCTGCAGTTGCACAAACAAACCAGAAC...CCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGGTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAAGGAAGCGTGTAAACTaGGGTTGTACCTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTRKRVN*GCTSEL
Trigger: TAGCTCAGAGGTACAACCGCAGTTTACACGCTTCCT...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGAGGAGGGGAGCCCTaGATAGAGAAGTGGGTAATA +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLRGGEP*IEKWVI
Trigger: TATTACCCACTTCTCTATGCAGGGCTCCCCTCCTCT...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATGGCTTGTGGAGGCACTaGAGCTGGCTCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYGLWRH*SWLHLA
Trigger: AGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCC...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp GAGCTACCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGCAGCGCTGCTTGTGCTaGTTATTTAAACCTAGCATA +
Preference number: 4 (lower is better)
Translates to: ELPNAVISLRAVLSTQRWQRCLC*LFKPSI
Trigger: TATGCTAGGTTTAAATAAGCAGCACAAGCAGCGCTG...CCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGGTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp AAGATGGAGCTGGTTCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGAGCACAGGGCAGCGCTaGTTGTGCTGCTTATTTAAA +
Preference number: 4 (lower is better)
Translates to: KMELVLVCLCNCSQSMKMSTGQR*LCCLFK
Trigger: TTTAAATAAGCAGCACAAGCAGCGCTGCCCTGTGCT...CATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAATCAGACTCGAGCTCTaGGAATATAGGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQIRLEL*EYRGRG
Trigger: CCCTCTGCCCCTATATTCCCAGAGCTCGAGTCTGAT...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATCAGACTCGAGCTCTaGGAATATAGGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKIRLEL*EYRGRG
Trigger: CCCTCTGCCCCTATATTCCCAGAGCTCGAGTCTGAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAACAAACCAGCCTGGGTaGAAGGAGACCAGTCTCAAC +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGTNQPG*KETSLN
Trigger: GTTGAGACTGGTCTCCTTCCACCCAGGCTGGTTTGT...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGACCAGATCCACCAACTaGTCCTCCAGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRTRSTN*SSSTGQ
Trigger: CTGCCCTGTGCTGGAGGACCAGTTGGTGGATCTGGT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATACCAGATCCACCAACTaGTCCTCCAGCACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYTRSTN*SSSTGQ
Trigger: CTGCCCTGTGCTGGAGGACCAGTTGGTGGATCTGGT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp GGAGCTGGTTCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCATCTCAGATCGCTCCATaGCATAAACAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: GAGSGLFVQLQPKYEDDSSQIAP*HKQPDP
Trigger: TGGATCTGGTTGTTTATGCCATGGAGCGATCTGAGA...TGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCTGCTGCCACAGGAGTTaGCTTGTTCCCCCATCGTCA +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLCCHRS*LVPPSS
Trigger: TGACGATGGGGGAACAAGCCAACTCCTGTGGCAGCA...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACAGATGGAGCTGGTTCTaGTTTGTTTGTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: LVCLCNCSQSMKMTQELNRWSWF*FVCATA
Trigger: TGCAGTTGCACAAACAAACCAGAACCAGCTCCATCT...GTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CTACCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGAGCACACAAAGATGGAGCTaGTTCTGGTTTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LPNAVISLRAVLSTQRWSTQRWS*FWFVCA
Trigger: TGCACAAACAAACCAGAACCAGCTCCATCTTTGTGT...GCTCCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGTAACATGGAGAGCATaGGCAGCTGGGTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKVTWRA*AAGLGN
Trigger: GTTTCCCAACCCAGCTGCCCATGCTCTCCATGTTAC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCCACACAAGTAACATaGAGAGCATGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSTQVT*RAWAAG
Trigger: CCCAGCTGCCCATGCTCTCCATGTTACTTGTGTGGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGAATCAAAGAGGCGGAATaGATAGCCAACCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRIKEAE*IANPLC
Trigger: ACAGAGTGGGTTGGCTATCCATTCCGCCTCTTTGAT...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGGAGGCACTGCAGCTaGCTCCATCTTGCTAATGTG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKWRHCS*LHLANV
Trigger: CACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CGTGTAAACTGCGGTTGTACCTCTGAGCTACCTAATGCTGTTATAAGCCTGAGAGAATACTTCCAGAAATaGATTGCAGGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: RVNCGCTSELPNAVISLREYFQK*IAGEPT
Trigger: TGTGGGTTCTCCTGCAATTCATTTCTGGAAGTATTC...TCTCAGGCTTATAACAGCATTAGGTAGCTCAGAGGTACAACCGCAGTTTACACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR TCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAGGCATGAACTGTCAGTaGATCCAGGAGGTTCATAGG +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQGMNCQ*IQEVHR
Trigger: CCTATGAACCTCCTGGATTCACTGACAGTTCATGCC...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGCATGAACTGTCAGTaGATCCAGGAGGTTCATAGG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGMNCQ*IQEVHR
Trigger: CCTATGAACCTCCTGGATTCACTGACAGTTCATGCC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CGTGTAAACTGCGGTTGTACCTCTGAGCTACCTAATGCTGTTATAAGCCTGAGACCCATGCATGTGATTTaGAAACAGTTGGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: RVNCGCTSELPNAVISLRPMHVI*KQLAKA
Trigger: AGCTTTTGCCAACTGTTTTCAAATCACATGCATGGG...TCTCAGGCTTATAACAGCATTAGGTAGCTCAGAGGTACAACCGCAGTTTACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR TCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAACAGCTCAGGGTGTGTaGAGCCCAATTATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQTAQGV*SPIMRS
Trigger: ACTCCTCATAATTGGGCTTCACACACCCTGAGCTGT...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACAGCTCAGGGTGTGTaGAGCCCAATTATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTAQGV*SPIMRS
Trigger: ACTCCTCATAATTGGGCTTCACACACCCTGAGCTGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACATTTATTGAGTTGCTaGCCCCCTGCTGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRHLLSC*PPADVE
Trigger: TTCTACATCAGCAGGGGGTCAGCAACTCAATAAATG...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATGCTTCATTTCCTTCGTaGCTACGCATGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYASFPS*LRMARQ
Trigger: CTGCCTGGCCATGCGTAGTCACGAAGGAAATGAAGC...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGACGAGTTTTCGTTTaGGAAATGCGCGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGRVFV*EMRGLS
Trigger: TGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAACCTTCAGAGAGCCAATaGTCGCATGGACGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQPSESQ*SHGRVF
Trigger: GAAAACTCGTCCATGCGATCATTGGCTCTCTGAAGG...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCTTCAGAGAGCCAATaGTCGCATGGACGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPSESQ*SHGRVF
Trigger: GAAAACTCGTCCATGCGATCATTGGCTCTCTGAAGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTACTGATGACAGGCAGTaGAATCAAAGAGGCGGAATG +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLTDDRQ*NQRGGM
Trigger: CATTCCGCCTCTTTGATTTCACTGCCTGTCATCAGT...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCACCTCTTCGAAAATaGTCTGCAGTTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPPLRK*SAVASP
Trigger: TGGAGACGCAACTGCAGAGCATTTTCGAAGAGGTGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGATGGAGCTGGTTCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGAATGGAGTTTATCCTTaGTGTGGGCCTGAAGGTATC +
Preference number: 4 (lower is better)
Translates to: KMELVLVCLCNCSQSMKMNGVYP*CGPEGI
Trigger: GATACCTTCAGGCCCACAGCAAGGATAAACTCCATT...CATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGAGGAGGGGAGCCCTaGATAGAGAAGTGGGTAATA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRGGEP*IEKWVI
Trigger: TATTACCCACTTCTCTATGCAGGGCTCCCCTCCTCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAACTTAGACACCAGCCCTaGGGTCGATTATCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQLRHQP*GRLSFR
Trigger: TCTGAAGGATAATCGACCGCAGGGCTGGTGTCTAAG...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTTAGACACCAGCCCTaGGGTCGATTATCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLRHQP*GRLSFR
Trigger: TCTGAAGGATAATCGACCGCAGGGCTGGTGTCTAAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAAGGGACCAGGAGATTTaGCAGCCATCGTATCGACTA +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWARDQEI*QPSYRL
Trigger: TAGTCGATACGATGGCTGGCAAATCTCCTGGTCCCT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGGGACCAGGAGATTTaGCAGCCATCGTATCGACTA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRDQEI*QPSYRL
Trigger: TAGTCGATACGATGGCTGGCAAATCTCCTGGTCCCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAAGGGACCAGGAGATTTaGCAGCCATCGTATCGACTA +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGRDQEI*QPSYRL
Trigger: TAGTCGATACGATGGCTGGCAAATCTCCTGGTCCCT...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCGATGCTAGAATGGTaGCACACAGCATGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPMLEW*HTACAR
Trigger: TCTTGCACATGCTGTGTGGCACCATTCTAGCATCGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAGGCTTGTGGAGGCACTaGAGCTGGCTCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQGLWRH*SWLHLA
Trigger: AGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCC...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGGCAGCGCTGCTTGTaGTGCTTATTTAAACCTAGC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGQRCL*CLFKPS
Trigger: GCTAGGTTTAAATAAGCAGCACAAGCAGCGCTGCCC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAGGGCAGCGCTGCTTGTaGTGCTTATTTAAACCTAGC +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGGQRCL*CLFKPS
Trigger: GCTAGGTTTAAATAAGCAGCACAAGCAGCGCTGCCC...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATTCACAAACCAGCCTaGGTGGAAGGAGACCAGTCT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKIHKPA*VEGDQS
Trigger: AGACTGGTCTCCTTCCACCCAGGCTGGTTTGTGAAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGATGCAGACCATATCCCTaGAATAAGGCTGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRCRPYP*NKAAPI
Trigger: TATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCA...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGATGCTGCCACAGGAGTTaGCTTGTTCCCCCATCGTCA +
Preference number: 4 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRCCHRS*LVPPSS
Trigger: TGACGATGGGGGAACAAGCCAACTCCTGTGGCAGCA...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp TCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAAGTCATTGCAAAGGCATaGGTTGACTGGGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: SGLFVQLQPKYEDDSGAEVIAKA*VDWGLL
Trigger: TAACAAACCCCAGTCAACCCATGCCTTTGCAATGAC...TTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGAGCCAAGGCCACACTaGACTTTGCATGAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKEPRPH*TLHEQV
Trigger: AACTTGCTCATGCAAAGTCCAGTGTGGCCTTGGCTC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAGAGCCAAGGCCACACTaGACTTTGCATGAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGEPRPH*TLHEQV
Trigger: AACTTGCTCATGCAAAGTCCAGTGTGGCCTTGGCTC...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGTACTCTCGACACAAAGATaGAGCTGGTTCTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: CLCNCSQSMKMTQELNSVLSTQR*SWFWFV
Trigger: AACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAG...TACAGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGGCTACCAAGGCCCTaGCTCCAATTCTCTCTAATA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGLPRP*LQFSLI
Trigger: TATTAGAGAGAATTGGAGCCAGGGCCTTGGTAGCCC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAGAGTCTCCAGTGATTTaGATACCGGAAGCAACTCTA +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTESPVI*IPEATL
Trigger: TAGAGTTGCTTCCGGTATCCAAATCACTGGAGACTC...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAGAGCCAATGATCGCATaGACGAGTTTTCGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTEPMIA*TSFRLR
Trigger: TCTCAAACGAAAACTCGTCCATGCGATCATTGGCTC...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGAGAGCATGGGCAGCTaGGTTGGGAAACTCATTGAA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKESMGS*VGKLIE
Trigger: TTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGACTGTTCATGGCTTGTaGAGGCACTGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRTVHGL*RHCSWL
Trigger: GAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGT...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATACTGTTCATGGCTTGTaGAGGCACTGCAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYTVHGL*RHCSWL
Trigger: GAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATGAGACCCACTGTTCATaGCTTGTGGAGGCACTGCAG +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYETHCS*LVEALQ
Trigger: CTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTC...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATTAGACTGAGGTGCTaGAGACCCACTGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKIRLRC*RPTVHG
Trigger: GCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAAGGTTTCTCAGGATCTaGGCAGCGTTTTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWARFLRI*AAFCFL
Trigger: GAGGAAGCAAAACGCTGCCCAGATCCTGAGAAACCT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACAGCGCTGCTTGTGCTaGGCAATGTTCAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQQRCLC*AMFKVC
Trigger: GCAGACCTTGAACATTGCTCAGCACAAGCAGCGCTG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368058.5
CDS-3UTR TCA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGAGAATACTTCCAGAAATaGATTGCAGGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: LPGHTYSSKESVMTEHLREYFQK*IAGEPT
Trigger: TGTGGGTTCTCCTGCAATTCATTTCTGGAAGTATTC...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAGGGGGTAATAGATCCTaGAGCCATACAGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAGGNRS*SHTVCS
Trigger: GGAACAAACTGTATGGCTTCAGGATCTATTACCCCC...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGGGGTAATAGATCCTaGAGCCATACAGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGGNRS*SHTVCS
Trigger: GGAACAAACTGTATGGCTTCAGGATCTATTACCCCC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCGGCATGAACTGTCAGTaGATCCAGGAGGTTCATAGG +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLGMNCQ*IQEVHR
Trigger: CCTATGAACCTCCTGGATTCACTGACAGTTCATGCC...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAAGGCTCATTTTGGCATaGACTGTCAGTGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGRLILA*TVSESR
Trigger: CCTGGATTCACTGACAGTTCATGCCAAAATGAGCCT...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGGCTCATTTTGGCATaGACTGTCAGTGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRLILA*TVSESR
Trigger: CCTGGATTCACTGACAGTTCATGCCAAAATGAGCCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTTTCTTCAGATTCTGCTaGGAGCACTGTTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLFFRFC*EHCFGI
Trigger: GATCCCAAAACAGTGCTCTCAGCAGAATCTGAAGAA...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACATTACACCAAGTTCCCTaGATTGAATCAGAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTLHQVP*IESEPV
Trigger: TACAGGCTCTGATTCAATTCAGGGAACTTGGTGTAA...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCACAGCTCAGGGTGTGTaGAGCCCAATTATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLTAQGV*SPIMRS
Trigger: ACTCCTCATAATTGGGCTTCACACACCCTGAGCTGT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGAGTTTTCGTTGCTCATTaGCTTCCACTTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRVFVAH*LPLPIL
Trigger: GAGTATAGGAAGTGGAAGTCAATGAGCAACGAAAAC...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTTTGCTGACCCCCTGCTaGTGTAGAAAACTCATATAC +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLLLTPC*CRKLIY
Trigger: GTATATGAGTTTTCTACATCAGCAGGGGGTCAGCAA...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTTATAAGCCTCCTAGATaGTCCAGTAGAGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLYKPPR*SSRVSS
Trigger: ACTGGAGACTCTACTGGATCATCTAGGAGGCTTATA...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGGACGAGTTTTCGTTTaGGAAATGCGCGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWGRVFV*EMRGLS
Trigger: TGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCC...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCGGACGAGTTTTCGTTTaGGAAATGCGCGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLGRVFV*EMRGLS
Trigger: TGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCC...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACTGATGACAGGCAGTaGAATCAAAGAGGCGGAATG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTDDRQ*NQRGGM
Trigger: CATTCCGCCTCTTTGATTTCACTGCCTGTCATCAGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGCTTGCTGCCAGAAGCTaGTGTACAACAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRLAARS*CTTAEL
Trigger: GAGCTCTGCTGTTGTACAGCAGCTTCTGGCAGCAAG...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAATGGAGTTTATCCTTaGTGTGGGCCTGAAGGTATC +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLNGVYP*CGPEGI
Trigger: GATACCTTCAGGCCCACAGCAAGGATAAACTCCATT...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGGAAGCGTGTAAACTaGGGTTGTACCTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRKRVN*GCTSEL
Trigger: TAGCTCAGAGGTACAACCGCAGTTTACACGCTTCCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAAGGATTTTCCTCTCGTaGATTCATAGCGCATTTCAG +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTRIFLS*IHSAFQ
Trigger: CTGAAATGCGCTATGAATGCACGAGAGGAAAATCCT...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACATTCCCAACTTCTTTaGCTGAAACTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKHSQLL*LKLPRP
Trigger: TGGCCTTGGCAGTTTCAGGCAAAGAAGTTGGGAATG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGCCGATGCTAGAATGGTaGCACACAGCATGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWPMLEW*HTACAR
Trigger: TCTTGCACATGCTGTGTGGCACCATTCTAGCATCGG...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTGATTAGACTGAGGTaGTGGAGACCCACTGTTCAT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLIRLR*WRPTVH
Trigger: ATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGCACAGGGCAGCGCTaGTTGTGCTGCTTATTTAAA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSTGQR*LCCLFK
Trigger: TTTAAATAAGCAGCACAAGCAGCGCTGCCCTGTGCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CTGGTTCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCAGATCCTTATCATATaGCAAAAGGCCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LVLVCLCNCSQSMKMTQEQILII*QKAFQR
Trigger: CCTTTGAAAGGCCTTTTGCCATATGATAAGGATCTG...CTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGATGGAGCTGGTTCTaGTTTGTTTGTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLRWSWF*FVCATA
Trigger: TGCAGTTGCACAAACAAACCAGAACCAGCTCCATCT...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACACCCTGCATAGAGAAGTaGGTAATAATGTCGTTTTCG +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTPCIEK*VIMSFS
Trigger: CGAAAACGACATTATTACCCACTTCTCTATGCAGGG...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGGGCTACCAAGGCCCTaGCTCCAATTCTCTCTAATA +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWGLPRP*LQFSLI
Trigger: TATTAGAGAGAATTGGAGCCAGGGCCTTGGTAGCCC...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCGGGCTACCAAGGCCCTaGCTCCAATTCTCTCTAATA +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLGLPRP*LQFSLI
Trigger: TATTAGAGAGAATTGGAGCCAGGGCCTTGGTAGCCC...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACACAAGTAACATaGAGAGCATGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFESTQVT*RAWAAG
Trigger: CCCAGCTGCCCATGCTCTCCATGTTACTTGTGTGGA...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATTCCACACAAGTAACATaGAGAGCATGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYSTQVT*RAWAAG
Trigger: CCCAGCTGCCCATGCTCTCCATGTTACTTGTGTGGA...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATCAAAGAGGCGGAATaGATAGCCAACCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKIKEAE*IANPLC
Trigger: ACAGAGTGGGTTGGCTATCCATTCCGCCTCTTTGAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATTGGAGGCACTGCAGCTaGCTCCATCTTGCTAATGTG +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYWRHCS*LHLANV
Trigger: CACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCA...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATGCAAAGGCATGGGTTaGCTGGGGTTTGTTAATATC +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWACKGMG*LGFVNI
Trigger: GATATTAACAAACCCCAGTCAACCCATGCCTTTGCA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATGCAAAGGCATGGGTTaGCTGGGGTTTGTTAATATC +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGCKGMG*LGFVNI
Trigger: GATATTAACAAACCCCAGTCAACCCATGCCTTTGCA...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGCAAAGGCATGGGTTaGCTGGGGTTTGTTAATATC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKCKGMG*LGFVNI
Trigger: GATATTAACAAACCCCAGTCAACCCATGCCTTTGCA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGAGGCTCATTTTGGCATaGACTGTCAGTGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWRLILA*TVSESR
Trigger: CCTGGATTCACTGACAGTTCATGCCAAAATGAGCCT...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTGGTTGCAATGCTGTaGATAAGGCTCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLVAML*IRLILA
Trigger: TGCCAAAATGAGCCTTATTCACAGCATTGCAACCAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAACACTGGACTTTGCATaGGCAAGTTTTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQTLDFA*ASFITL
Trigger: CAGGGTGATAAAACTTGCTCATGCAAAGTCCAGTGT...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACACTGGACTTTGCATaGGCAAGTTTTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTLDFA*ASFITL
Trigger: CAGGGTGATAAAACTTGCTCATGCAAAGTCCAGTGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTCCCATGCATGTGATTTaGAAACAGTTGGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLPMHVI*KQLAKA
Trigger: AGCTTTTGCCAACTGTTTTCAAATCACATGCATGGG...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGATCCCCCATGCATGTaGTTTGAAAACAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKDPPCM*FENSWQ
Trigger: TTGCCAACTGTTTTCAAATCACATGCATGGGGGATC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTCTTCAGATTCTGCTaGGAGCACTGTTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKFFRFC*EHCFGI
Trigger: GATCCCAAAACAGTGCTCTCAGCAGAATCTGAAGAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTGCACATTATTTTGTTTaGAGAATGCCTGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLAHYFV*RMPVVG
Trigger: GCCCACTACAGGCATTCTTCAAACAAAATAATGTGC...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTGCTGACCCCCTGCTaGTGTAGAAAACTCATATAC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLLTPC*CRKLIY
Trigger: GTATATGAGTTTTCTACATCAGCAGGGGGTCAGCAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACATTTATTGAGTTGCTaGCCCCCTGCTGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKHLLSC*PPADVE
Trigger: TTCTACATCAGCAGGGGGTCAGCAACTCAATAAATG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTTCAATGCATTTATTaGGTTGCTGACCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKFQCIY*VADPLL
Trigger: CAGCAGGGGGTCAGCAACTCAATAAATGCATTGAAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATATAAGCCTCCTAGATaGTCCAGTAGAGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKYKPPR*SSRVSS
Trigger: ACTGGAGACTCTACTGGATCATCTAGGAGGCTTATA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACGGACGAGTTTTCGTTTaGGAAATGCGCGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNGRVFV*EMRGLS
Trigger: TGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCC...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR TCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGCCTTCAGAGAGCCAATaGTCGCATGGACGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEPSESQ*SHGRVF
Trigger: GAAAACTCGTCCATGCGATCATTGGCTCTCTGAAGG...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATCCTTCAGAGAGCCAATaGTCGCATGGACGAGTTTTC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYPSESQ*SHGRVF
Trigger: GAAAACTCGTCCATGCGATCATTGGCTCTCTGAAGG...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAGGTTGGGAAACTCATTaGATCTCCAGTCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQGWETH*ISSHSL
Trigger: CAAACTGTGACTGGAGATTCAATGAGTTTCCCAACC...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGTTGGGAAACTCATTaGATCTCCAGTCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGWETH*ISSHSL
Trigger: CAAACTGTGACTGGAGATTCAATGAGTTTCCCAACC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACACCCAACTTCTTTGCCTaGAACTGCCAAGGCCATGAG +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTPNFFA*NCQGHE
Trigger: CTCATGGCCTTGGCAGTTTCAGGCAAAGAAGTTGGG...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACACTTGGCACTAAAGGCTaGCTTTTTAGGACAACATTT +
Preference number: 4 (lower is better)
Translates to: NGFMKPPDFLTATSCESTLGTKG*LFRTTF
Trigger: AAATGTTGTCCTAAAAAGTCAGCCTTTAGTGCCAAG...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCACAGTCTGGCTTCACTaGGTTACTGGTAAAGACACG +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLTVWLH*VTGKDT
Trigger: CGTGTCTTTACCAGTAACTCAGTGAAGCCAGACTGT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCTTCGAAAATGCTCTaGAGTTGCGTCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSSKML*SCVSIC
Trigger: ACAGATGGAGACGCAACTGCAGAGCATTTTCGAAGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGCCACCTCTTCGAAAATaGTCTGCAGTTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRPPLRK*SAVASP
Trigger: TGGAGACGCAACTGCAGAGCATTTTCGAAGAGGTGG...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGCCACCTCTTCGAAAATaGTCTGCAGTTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRPPLRK*SAVASP
Trigger: TGGAGACGCAACTGCAGAGCATTTTCGAAGAGGTGG...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGACCACCTCTTCGAAAATaGTCTGCAGTTGCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRPPLRK*SAVASP
Trigger: TGGAGACGCAACTGCAGAGCATTTTCGAAGAGGTGG...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACTTGCTGCCAGAAGCTaGTGTACAACAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQLAARS*CTTAEL
Trigger: GAGCTCTGCTGTTGTACAGCAGCTTCTGGCAGCAAG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACACTTGCTGCCAGAAGCTaGTGTACAACAGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTLAARS*CTTAEL
Trigger: GAGCTCTGCTGTTGTACAGCAGCTTCTGGCAGCAAG...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAATATAACCTCTCTTGCTaGCAGAAGCTGCTGTACAAC +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQYNLSC*QKLLYN
Trigger: GTTGTACAGCAGCTTCTGGCAGCAAGAGAGGTTATA...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATATAACCTCTCTTGCTaGCAGAAGCTGCTGTACAAC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKYNLSC*QKLLYN
Trigger: GTTGTACAGCAGCTTCTGGCAGCAAGAGAGGTTATA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATAACCTCTCTTGCTaGCAGAAGCTGCTGTACAAC +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGYNLSC*QKLLYN
Trigger: GTTGTACAGCAGCTTCTGGCAGCAAGAGAGGTTATA...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAACCAGTGTGGAAGTTTaGCTTCAGGATACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQTSVEV*LQDTVS
Trigger: GGAAACTGTATCCTGAAGGCAAACTTCCACACTGGT...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACCAGTGTGGAAGTTTaGCTTCAGGATACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTSVEV*LQDTVS
Trigger: GGAAACTGTATCCTGAAGGCAAACTTCCACACTGGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAATGGAGTTTATCCTTaGTGTGGGCCTGAAGGTATC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKNGVYP*CGPEGI
Trigger: GATACCTTCAGGCCCACAGCAAGGATAAACTCCATT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp GCTGGTTCTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGATTAAACCTAGCATATTaGAGACCATATCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: AGSGLFVQLQPKYEDDSGLNLAY*RPYPWN
Trigger: ATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAA...TCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp GAGCTACCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGCATATGTGGAAAACTTaGAAACTGGAAAAGCACAAA +
Preference number: 4 (lower is better)
Translates to: ELPNAVISLRAVLSTQRWHMWKT*KLEKHK
Trigger: TTTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATG...CCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAGGCCACACTGGACTTTaGATGAGCAAGTTTTATCAC +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQGHTGL*MSKFYH
Trigger: GTGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCC...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGCCACACTGGACTTTaGATGAGCAAGTTTTATCAC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGHTGL*MSKFYH
Trigger: GTGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp ATGAAGATGACTCAGGAGCTGAACTCTGTAATGAGGCTGAATATGATGCATCCGGTTTGTTTGTGCAACTaGAGCCAAAGTATGAAGATG +
Preference number: 4 (lower is better)
Translates to: MKMTQELNSVMRLNMMHPVCLCN*SQSMKM
Trigger: CATCTTCATACTTTGGCTGCAGTTGCACAAACAAAC...CGGATGCATCATATTCAGCCTCATTACAGAGTTCAGCTCCTGAGTCATCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTGTTCTGGTTTGTTTGTaGAACTGCAGCCAAAGTATG +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLVLVCL*NCSQSM
Trigger: CATACTTTGGCTGCAGTTGCACAAACAAACCAGAAC...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAGAGGAGGGGAGCCCTaGATAGAGAAGTGGGTAATA +
Preference number: 4 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRRGGEP*IEKWVI
Trigger: TATTACCCACTTCTCTATGCAGGGCTCCCCTCCTCT...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTCATGTGCTTGGTGTaGCAGTCATTCTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKFMCLV*QSFCNQ
Trigger: CTGGTTACAGAATGACTGGCACACCAAGCACATGAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTTTCGTTTGAGAAATaGGCGGTCTCTCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKFSFEK*AVSQVH
Trigger: ATGCACCTGAGAGACCGCGCATTTCTCAAACGAAAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATCTTAGACACCAGCCCTaGGGTCGATTATCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYLRHQP*GRLSFR
Trigger: TCTGAAGGATAATCGACCGCAGGGCTGGTGTCTAAG...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCCTTAGACACCAGCCCTaGGGTCGATTATCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESLRHQP*GRLSFR
Trigger: TCTGAAGGATAATCGACCGCAGGGCTGGTGTCTAAG...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGCCGATGCTAGAATGGTaGCACACAGCATGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEPMLEW*HTACAR
Trigger: TCTTGCACATGCTGTGTGGCACCATTCTAGCATCGG...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGCTGATTAGACTGAGGTaGTGGAGACCCACTGTTCAT +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWLIRLR*WRPTVH
Trigger: ATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAG...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTATCAGACTCGAGCTCTaGGAATATAGGGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIIRLEL*EYRGRG
Trigger: CCCTCTGCCCCTATATTCCCAGAGCTCGAGTCTGAT...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATTCACAAACCAGCCTaGGTGGAAGGAGACCAGTCT +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRIHKPA*VEGDQS
Trigger: AGACTGGTCTCCTTCCACCCAGGCTGGTTTGTGAAT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCATTCACAAACCAGCCTaGGTGGAAGGAGACCAGTCT +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESIHKPA*VEGDQS
Trigger: AGACTGGTCTCCTTCCACCCAGGCTGGTTTGTGAAT...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACATTCACAAACCAGCCTaGGTGGAAGGAGACCAGTCT +
Preference number: 4 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNIHKPA*VEGDQS
Trigger: AGACTGGTCTCCTTCCACCCAGGCTGGTTTGTGAAT...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAATACAGCGACCACAAATaGAGTTTATCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQYSDHK*SLSLLW
Trigger: CCACAGCAAGGATAAACTCCATTTGTGGTCGCTGTA...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATACAGCGACCACAAATaGAGTTTATCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKYSDHK*SLSLLW
Trigger: CCACAGCAAGGATAAACTCCATTTGTGGTCGCTGTA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGCAGACCATATCCCTaGAATAAGGCTGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKCRPYP*NKAAPI
Trigger: TATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATCTCAGATCGCTCCATaGCATAAACAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWASQIAP*HKQPDP
Trigger: TGGATCTGGTTGTTTATGCCATGGAGCGATCTGAGA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCTCAGATCGCTCCATaGCATAAACAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSQIAP*HKQPDP
Trigger: TGGATCTGGTTGTTTATGCCATGGAGCGATCTGAGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGTCATTGCAAAGGCATaGGTTGACTGGGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKVIAKA*VDWGLL
Trigger: TAACAAACCCCAGTCAACCCATGCCTTTGCAATGAC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGGAGCCAAGGCCACACTaGACTTTGCATGAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLREPRPH*TLHEQV
Trigger: AACTTGCTCATGCAAAGTCCAGTGTGGCCTTGGCTC...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGATGGAGCTGGTTCTaGTTTGTTTGTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRWSWF*FVCATA
Trigger: TGCAGTTGCACAAACAAACCAGAACCAGCTCCATCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTCTCGACACAAAGATaGAGCTGGTTCTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLSTQR*SWFWFV
Trigger: AACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAGGGCTACCAAGGCCCTaGCTCCAATTCTCTCTAATA +
Preference number: 4 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRGLPRP*LQFSLI
Trigger: TATTAGAGAGAATTGGAGCCAGGGCCTTGGTAGCCC...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGAGTCTCCAGTGATTTaGATACCGGAAGCAACTCTA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKESPVI*IPEATL
Trigger: TAGAGTTGCTTCCGGTATCCAAATCACTGGAGACTC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGAGCCAATGATCGCATaGACGAGTTTTCGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKEPMIA*TSFRLR
Trigger: TCTCAAACGAAAACTCGTCCATGCGATCATTGGCTC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAGAGCCAATGATCGCATaGACGAGTTTTCGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGEPMIA*TSFRLR
Trigger: TCTCAAACGAAAACTCGTCCATGCGATCATTGGCTC...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTATAGTAGGTGTCATCTaGAACCCAAGGATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLIVGVI*NPRIFL
Trigger: GAGGAAAATCCTTGGGTTCCAGATGACACCTACTAT...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAATCTCCAGTCACAGTTTaGAAAGGGACCAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQSPVTV*KGTRRF
Trigger: AAATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGA...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCTCCAGTCACAGTTTaGAAAGGGACCAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSPVTV*KGTRRF
Trigger: AAATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGGAGAGCATGGGCAGCTaGGTTGGGAAACTCATTGAA +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRESMGS*VGKLIE
Trigger: TTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTC...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGGAGAGCATGGGCAGCTaGGTTGGGAAACTCATTGAA +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEESMGS*VGKLIE
Trigger: TTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTC...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAGTAACATGGAGAGCATaGGCAGCTGGGTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQVTWRA*AAGLGN
Trigger: GTTTCCCAACCCAGCTGCCCATGCTCTCCATGTTAC...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTGTAACATGGAGAGCATaGGCAGCTGGGTTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIVTWRA*AAGLGN
Trigger: GTTTCCCAACCCAGCTGCCCATGCTCTCCATGTTAC...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATGGAGGCACTGCAGCTaGCTCCATCTTGCTAATGTG +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQWRHCS*LHLANV
Trigger: CACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATTAGACTGAGGTGCTaGAGACCCACTGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRIRLRC*RPTVHG
Trigger: GCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAAT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATATTAGACTGAGGTGCTaGAGACCCACTGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYIRLRC*RPTVHG
Trigger: GCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAAT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACATTAGACTGAGGTGCTaGAGACCCACTGTTCATGGC +
Preference number: 4 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNIRLRC*RPTVHG
Trigger: GCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAAT...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR TCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAGAATACTTCCAGAAATaGATTGCAGGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGEYFQK*IAGEPT
Trigger: TGTGGGTTCTCCTGCAATTCATTTCTGGAAGTATTC...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGAATACTTCCAGAAATaGATTGCAGGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKEYFQK*IAGEPT
Trigger: TGTGGGTTCTCCTGCAATTCATTTCTGGAAGTATTC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGGGGGGTAATAGATCCTaGAGCCATACAGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEGGNRS*SHTVCS
Trigger: GGAACAAACTGTATGGCTTCAGGATCTATTACCCCC...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGGGGGTAATAGATCCTaGAGCCATACAGTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRGGNRS*SHTVCS
Trigger: GGAACAAACTGTATGGCTTCAGGATCTATTACCCCC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCCTGGTTGCAATGCTGTaGATAAGGCTCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLLVAML*IRLILA
Trigger: TGCCAAAATGAGCCTTATTCACAGCATTGCAACCAG...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGACCCATGCATGTGATTTaGAAACAGTTGGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGPMHVI*KQLAKA
Trigger: AGCTTTTGCCAACTGTTTTCAAATCACATGCATGGG...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCCATGCATGTGATTTaGAAACAGTTGGCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPMHVI*KQLAKA
Trigger: AGCTTTTGCCAACTGTTTTCAAATCACATGCATGGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGATCCCCCATGCATGTaGTTTGAAAACAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWDPPCM*FENSWQ
Trigger: TTGCCAACTGTTTTCAAATCACATGCATGGGGGATC...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTACACCAAGTTCCCTaGATTGAATCAGAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLHQVP*IESEPV
Trigger: TACAGGCTCTGATTCAATTCAGGGAACTTGGTGTAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATGTGAAGCCCAATTATaGGGAGTGAAACTCATGATG +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWACEAQL*GVKLMM
Trigger: CATCATGAGTTTCACTCCTCATAATTGGGCTTCACA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGTGAAGCCCAATTATaGGGAGTGAAACTCATGATG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKCEAQL*GVKLMM
Trigger: CATCATGAGTTTCACTCCTCATAATTGGGCTTCACA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTACAGCTCAGGGTGTGTaGAGCCCAATTATGAGGAGT +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRITAQGV*SPIMRS
Trigger: ACTCCTCATAATTGGGCTTCACACACCCTGAGCTGT...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGCACATTATTTTGTTTaGAGAATGCCTGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKAHYFV*RMPVVG
Trigger: GCCCACTACAGGCATTCTTCAAACAAAATAATGTGC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGTTTTCGTTGCTCATTaGCTTCCACTTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKVFVAH*LPLPIL
Trigger: GAGTATAGGAAGTGGAAGTCAATGAGCAACGAAAAC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCTTTCAATGCATTTATTaGGTTGCTGACCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLFQCIY*VADPLL
Trigger: CAGCAGGGGGTCAGCAACTCAATAAATGCATTGAAA...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTGATGACAGGCAGTaGAATCAAAGAGGCGGAATG +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESTDDRQ*NQRGGM
Trigger: CATTCCGCCTCTTTGATTTCACTGCCTGTCATCAGT...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAACTGATGACAGGCAGTaGAATCAAAGAGGCGGAATG +
Preference number: 4 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRTDDRQ*NQRGGM
Trigger: CATTCCGCCTCTTTGATTTCACTGCCTGTCATCAGT...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGACAGTCTGGCTTCACTaGGTTACTGGTAAAGACACG +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRTVWLH*VTGKDT
Trigger: CGTGTCTTTACCAGTAACTCAGTGAAGCCAGACTGT...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAAAAATGCTCTGCAGTTaGGTCTCCATCTGTACTATC +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAKMLCS*VSICTI
Trigger: GATAGTACAGATGGAGACGCAACTGCAGAGCATTTT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAAAATGCTCTGCAGTTaGGTCTCCATCTGTACTATC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKKMLCS*VSICTI
Trigger: GATAGTACAGATGGAGACGCAACTGCAGAGCATTTT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGTATCTTTCCAAGATATATaGTATAACCTCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: CLCNCSQSMKMTQELNSVSFQDI*YNLSCC
Trigger: GCAGCAAGAGAGGTTATAGCATATATCTTGGAAAGA...TACAGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR GCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCACCAGTGTGGAAGTTTaGCTTCAGGATACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLTSVEV*LQDTVS
Trigger: GGAAACTGTATCCTGAAGGCAAACTTCCACACTGGT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTGTTTGTTTGTGCAACTaGAGCCAAAGTATGAAGATG +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLVCLCN*SQSMKM
Trigger: CATCTTCATACTTTGGCTGCAGTTGCACAAACAAAC...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGTTCTGGTTTGTTTGTaGAACTGCAGCCAAAGTATG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKVLVCL*NCSQSM
Trigger: CATACTTTGGCTGCAGTTGCACAAACAAACCAGAAC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAGTTCTGGTTTGTTTGTaGAACTGCAGCCAAAGTATG +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGVLVCL*NCSQSM
Trigger: CATACTTTGGCTGCAGTTGCACAAACAAACCAGAAC...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGAGGAAGCGTGTAAACTaGGGTTGTACCTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFERKRVN*GCTSEL
Trigger: TAGCTCAGAGGTACAACCGCAGTTTACACGCTTCCT...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACAGGAAGCGTGTAAACTaGGGTTGTACCTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNRKRVN*GCTSEL
Trigger: TAGCTCAGAGGTACAACCGCAGTTTACACGCTTCCT...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTAGAGGAGGGGAGCCCTaGATAGAGAAGTGGGTAATA +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIRGGEP*IEKWVI
Trigger: TATTACCCACTTCTCTATGCAGGGCTCCCCTCCTCT...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATATACCAGGAAATCTaGAAATGTCCTCACATGGGC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKIYQEI*KCPHMG
Trigger: GCCCATGTGAGGACATTTGCAGATTTCCTGGTATAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAATATACCAGGAAATCTaGAAATGTCCTCACATGGGC +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGIYQEI*KCPHMG
Trigger: GCCCATGTGAGGACATTTGCAGATTTCCTGGTATAT...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCATTCTGTAACCAGTaGTCTGGGGAATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSFCNQ*SGEFSF
Trigger: GAAGGAAAATTCCCCAGAGCACTGGTTACAGAATGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGTTCATGTGCTTGGTGTaGCAGTCATTCTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWFMCLV*QSFCNQ
Trigger: CTGGTTACAGAATGACTGGCACACCAAGCACATGAA...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGGATTTTCCTCTCGTaGATTCATAGCGCATTTCAG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRIFLS*IHSAFQ
Trigger: CTGAAATGCGCTATGAATGCACGAGAGGAAAATCCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGTCTGCCAATCAATCTaGAATAGTAGGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKVCQSI*NSRCHL
Trigger: CAGATGACACCTACTATTGCAGATTGATTGGCAGAC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTAGGGACCAGGAGATTTaGCAGCCATCGTATCGACTA +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIRDQEI*QPSYRL
Trigger: TAGTCGATACGATGGCTGGCAAATCTCCTGGTCCCT...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGCATTCCCAACTTCTTTaGCTGAAACTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRHSQLL*LKLPRP
Trigger: TGGCCTTGGCAGTTTCAGGCAAAGAAGTTGGGAATG...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATCATTCCCAACTTCTTTaGCTGAAACTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYHSQLL*LKLPRP
Trigger: TGGCCTTGGCAGTTTCAGGCAAAGAAGTTGGGAATG...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGCATTCCCAACTTCTTTaGCTGAAACTGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRHSQLL*LKLPRP
Trigger: TGGCCTTGGCAGTTTCAGGCAAAGAAGTTGGGAATG...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACCGATGCTAGAATGGTaGCACACAGCATGTGCAAGA +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQPMLEW*HTACAR
Trigger: TCTTGCACATGCTGTGTGGCACCATTCTAGCATCGG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCCTGATTAGACTGAGGTaGTGGAGACCCACTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESLIRLR*WRPTVH
Trigger: ATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAG...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATCTGATTAGACTGAGGTaGTGGAGACCCACTGTTCAT +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYLIRLR*WRPTVH
Trigger: ATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAG...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAATCTGGGCAGCGTTTTaGTTCCTCTTAATTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQIWAAF*FLLIWN
Trigger: GTTCCAAATTAAGAGGAAGCAAAACGCTGCCCAGAT...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACAGCGCTGCTTGTGCTaGTTATTTAAACCTAGCATA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKQRCLC*LFKPSI
Trigger: TATGCTAGGTTTAAATAAGCAGCACAAGCAGCGCTG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAACGAATTATTTACAACTaGCAGAAGACTACAGCGACC +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQRIIYN*QKTTAT
Trigger: GGTCGCTGTAGTCTTCTGCCAGTTGTAAATAATTCG...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACGAATTATTTACAACTaGCAGAAGACTACAGCGACC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRIIYN*QKTTAT
Trigger: GGTCGCTGTAGTCTTCTGCCAGTTGTAAATAATTCG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGTATGAAGATGACTCAGGAGCTGAACTCTGTAATGAGGCTGAATATGATGCACGAATTATTTACAACTaGCAGAAGACTACAGCGACC +
Preference number: 4 (lower is better)
Translates to: KYEDDSGAELCNEAEYDARIIYN*QKTTAT
Trigger: GGTCGCTGTAGTCTTCTGCCAGTTGTAAATAATTCG...TGCATCATATTCAGCCTCATTACAGAGTTCAGCTCCTGAGTCATCTTCATACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp TGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGTAAGAAAGCACCATATGTaGAAAACTTGCAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: CLCNCSQSMKMTQELNSVRKHHM*KTCKLE
Trigger: TTCCAGTTTGCAAGTTTTCCACATATGGTGCTTTCT...TACAGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAGAGCCAAGGCCACACTaGACTTTGCATGAGCAAGTT +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQEPRPH*TLHEQV
Trigger: AACTTGCTCATGCAAAGTCCAGTGTGGCCTTGGCTC...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAACACAAAGATGGAGCTaGTTCTGGTTTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWATQRWS*FWFVCA
Trigger: TGCACAAACAAACCAGAACCAGCTCCATCTTTGTGT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACACAAAGATGGAGCTaGTTCTGGTTTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTQRWS*FWFVCA
Trigger: TGCACAAACAAACCAGAACCAGCTCCATCTTTGTGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGCTCTCGACACAAAGATaGAGCTGGTTCTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWLSTQR*SWFWFV
Trigger: AACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAG...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGACCCTGCATAGAGAAGTaGGTAATAATGTCGTTTTCG +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGPCIEK*VIMSFS
Trigger: CGAAAACGACATTATTACCCACTTCTCTATGCAGGG...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCCTGCATAGAGAAGTaGGTAATAATGTCGTTTTCG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPCIEK*VIMSFS
Trigger: CGAAAACGACATTATTACCCACTTCTCTATGCAGGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATAGTAGGTGTCATCTaGAACCCAAGGATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKIVGVI*NPRIFL
Trigger: GAGGAAAATCCTTGGGTTCCAGATGACACCTACTAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAGAGAGCATGGGCAGCTaGGTTGGGAAACTCATTGAA +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTESMGS*VGKLIE
Trigger: TTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTC...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCATCAAAGAGGCGGAATaGATAGCCAACCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESIKEAE*IANPLC
Trigger: ACAGAGTGGGTTGGCTATCCATTCCGCCTCTTTGAT...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATGCTTCCTCTTAATTTaGAACCCTTGCTGTGTACTC +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWACFLLI*NPCCVL
Trigger: GAGTACACAGCAAGGGTTCCAAATTAAGAGGAAGCA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAAGAACCCACATAAGATaGTCTCTGCCTTTAATCAGT +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWARTHIR*SLPLIS
Trigger: ACTGATTAAAGGCAGAGATCATCTTATGTGGGTTCT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGAACCCACATAAGATaGTCTCTGCCTTTAATCAGT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRTHIR*SLPLIS
Trigger: ACTGATTAAAGGCAGAGATCATCTTATGTGGGTTCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGCTGGTTGCAATGCTGTaGATAAGGCTCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRLVAML*IRLILA
Trigger: TGCCAAAATGAGCCTTATTCACAGCATTGCAACCAG...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGCTGGTTGCAATGCTGTaGATAAGGCTCATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRLVAML*IRLILA
Trigger: TGCCAAAATGAGCCTTATTCACAGCATTGCAACCAG...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGACACTGGACTTTGCATaGGCAAGTTTTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFETLDFA*ASFITL
Trigger: CAGGGTGATAAAACTTGCTCATGCAAAGTCCAGTGT...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGATCCCCCATGCATGTaGTTTGAAAACAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRDPPCM*FENSWQ
Trigger: TTGCCAACTGTTTTCAAATCACATGCATGGGGGATC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCGATCCCCCATGCATGTaGTTTGAAAACAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESDPPCM*FENSWQ
Trigger: TTGCCAACTGTTTTCAAATCACATGCATGGGGGATC...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTTCTTCAGATTCTGCTaGGAGCACTGTTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEFFRFC*EHCFGI
Trigger: GATCCCAAAACAGTGCTCTCAGCAGAATCTGAAGAA...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCTGTGAAGCCCAATTATaGGGAGTGAAACTCATGATG +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLCEAQL*GVKLMM
Trigger: CATCATGAGTTTCACTCCTCATAATTGGGCTTCACA...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCTTGCTGACCCCCTGCTaGTGTAGAAAACTCATATAC +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESLLTPC*CRKLIY
Trigger: GTATATGAGTTTTCTACATCAGCAGGGGGTCAGCAA...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGTTTCAATGCATTTATTaGGTTGCTGACCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRFQCIY*VADPLL
Trigger: CAGCAGGGGGTCAGCAACTCAATAAATGCATTGAAA...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTATAAGCCTCCTAGATaGTCCAGTAGAGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRYKPPR*SSRVSS
Trigger: ACTGGAGACTCTACTGGATCATCTAGGAGGCTTATA...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGGTTGGGAAACTCATTaGATCTCCAGTCACAGTTTG +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRGWETH*ISSHSL
Trigger: CAAACTGTGACTGGAGATTCAATGAGTTTCCCAACC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTTGGCACTAAAGGCTaGCTTTTTAGGACAACATTT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLGTKG*LFRTTF
Trigger: AAATGTTGTCCTAAAAAGTCAGCCTTTAGTGCCAAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATACATCATCTGTCAGGTaGGAGTGTCAACCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYTSSVR*ECQPAK
Trigger: TTTTGCAGGTTGACACTCTCACCTGACAGATGATGT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGTCTTCGAAAATGCTCTaGAGTTGCGTCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRSSKML*SCVSIC
Trigger: ACAGATGGAGACGCAACTGCAGAGCATTTTCGAAGA...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTCTTCGAAAATGCTCTaGAGTTGCGTCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRSSKML*SCVSIC
Trigger: ACAGATGGAGACGCAACTGCAGAGCATTTTCGAAGA...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCTTCGAAAATGCTCTaGAGTTGCGTCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFESSKML*SCVSIC
Trigger: ACAGATGGAGACGCAACTGCAGAGCATTTTCGAAGA...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATACCAGTGTGGAAGTTTaGCTTCAGGATACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYTSVEV*LQDTVS
Trigger: GGAAACTGTATCCTGAAGGCAAACTTCCACACTGGT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCAATGGAGTTTATCCTTaGTGTGGGCCTGAAGGTATC +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESNGVYP*CGPEGI
Trigger: GATACCTTCAGGCCCACAGCAAGGATAAACTCCATT...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGAATGGAGTTTATCCTTaGTGTGGGCCTGAAGGTATC +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRNGVYP*CGPEGI
Trigger: GATACCTTCAGGCCCACAGCAAGGATAAACTCCATT...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTTCCAGAAATGAATTaGAGGAGAACCCACATAAGA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLPEMN*RRTHIR
Trigger: TCTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTTTATCACCCTGGTTaGAATGCTGTGAATAAGGCT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKFYHPG*NAVNKA
Trigger: AGCCTTATTCACAGCATTGCAACCAGGGTGATAAAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGGGCCACACTGGACTTTaGATGAGCAAGTTTTATCAC +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEGHTGL*MSKFYH
Trigger: GTGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCC...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGTTTGTTTGTGCAACTaGAGCCAAAGTATGAAGATG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKVCLCN*SQSMKM
Trigger: CATCTTCATACTTTGGCTGCAGTTGCACAAACAAAC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCATATACCAGGAAATCTaGAAATGTCCTCACATGGGC +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLIYQEI*KCPHMG
Trigger: GCCCATGTGAGGACATTTGCAGATTTCCTGGTATAT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGTCATTCTGTAACCAGTaGTCTGGGGAATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWSFCNQ*SGEFSF
Trigger: GAAGGAAAATTCCCCAGAGCACTGGTTACAGAATGA...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCTTCATGTGCTTGGTGTaGCAGTCATTCTGTAACCAG +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESFMCLV*QSFCNQ
Trigger: CTGGTTACAGAATGACTGGCACACCAAGCACATGAA...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGTTTTCGTTTGAGAAATaGGCGGTCTCTCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRFSFEK*AVSQVH
Trigger: ATGCACCTGAGAGACCGCGCATTTCTCAAACGAAAA...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCGTATCGACTAGTCTaGCAATCAATCTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSYRLV*QSICNS
Trigger: ACTATTGCAGATTGATTGGCAGACTAGTCGATACGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGAGATGATCAAACCAATTaGATTCATCCATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRDDQTN*IHPCCN
Trigger: ATTACAGCATGGATGAATGCAATTGGTTTGATCATC...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATAATCTTCTCTACTTaGTCTTTCACGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKIIFST*SFTLSP
Trigger: TGGTGACAGCGTGAAAGAGCAAGTAGAGAAGATTAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAATAATCTTCTCTACTTaGTCTTTCACGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGIIFST*SFTLSP
Trigger: TGGTGACAGCGTGAAAGAGCAAGTAGAGAAGATTAT...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAAGCACAGGGCAGCGCTaGTTGTGCTGCTTATTTAAA +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTSTGQR*LCCLFK
Trigger: TTTAAATAAGCAGCACAAGCAGCGCTGCCCTGTGCT...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACTACAGCGACCACAAATaGAGTTTATCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNYSDHK*SLSLLW
Trigger: CCACAGCAAGGATAAACTCCATTTGTGGTCGCTGTA...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCCGAATTATTTACAACTaGCAGAAGACTACAGCGACC +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLRIIYN*QKTTAT
Trigger: GGTCGCTGTAGTCTTCTGCCAGTTGTAAATAATTCG...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACAGATCCTTATCATATaGCAAAAGGCCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKQILII*QKAFQR
Trigger: CCTTTGAAAGGCCTTTTGCCATATGATAAGGATCTG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTGCAGACCATATCCCTaGAATAAGGCTGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRCRPYP*NKAAPI
Trigger: TATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCA...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGGTCATTGCAAAGGCATaGGTTGACTGGGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRVIAKA*VDWGLL
Trigger: TAACAAACCCCAGTCAACCCATGCCTTTGCAATGAC...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAGTCATTGCAAAGGCATaGGTTGACTGGGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRVIAKA*VDWGLL
Trigger: TAACAAACCCCAGTCAACCCATGCCTTTGCAATGAC...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGAGATGGAGCTGGTTCTaGTTTGTTTGTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRRWSWF*FVCATA
Trigger: TGCAGTTGCACAAACAAACCAGAACCAGCTCCATCT...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATAGATGGAGCTGGTTCTaGTTTGTTTGTGCAACTGCA +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYRWSWF*FVCATA
Trigger: TGCAGTTGCACAAACAAACCAGAACCAGCTCCATCT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGGAGTCTCCAGTGATTTaGATACCGGAAGCAACTCTA +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEESPVI*IPEATL
Trigger: TAGAGTTGCTTCCGGTATCCAAATCACTGGAGACTC...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTCTCCAGTCACAGTTTaGAAAGGGACCAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRSPVTV*KGTRRF
Trigger: AAATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGA...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCTCCAGTCACAGTTTaGAAAGGGACCAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFESPVTV*KGTRRF
Trigger: AAATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGA...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAATCAAAGAGGCGGAATaGATAGCCAACCCACTCTGT +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTIKEAE*IANPLC
Trigger: ACAGAGTGGGTTGGCTATCCATTCCGCCTCTTTGAT...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGAAGAGGAAGTCACAGATaGGATCCATGTAATTTAAAT +
Preference number: 4 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRRGSHR*DPCNLN
Trigger: ATTTAAATTACATGGATCCCATCTGTGACTTCCTCT...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAGAACCCACATAAGATaGTCTCTGCCTTTAATCAGT +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLRTHIR*SLPLIS
Trigger: ACTGATTAAAGGCAGAGATCATCTTATGTGGGTTCT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGGAATACTTCCAGAAATaGATTGCAGGAGAACCCACA +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEEYFQK*IAGEPT
Trigger: TGTGGGTTCTCCTGCAATTCATTTCTGGAAGTATTC...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACATGCAAAGGCATGGGTTaGCTGGGGTTTGTTAATATC +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTCKGMG*LGFVNI
Trigger: GATATTAACAAACCCCAGTCAACCCATGCCTTTGCA...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTACACTGGACTTTGCATaGGCAAGTTTTATCACCCTG +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRITLDFA*ASFITL
Trigger: CAGGGTGATAAAACTTGCTCATGCAAAGTCCAGTGT...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAAACTCATGATGGTCTaGAGTATGTCTTTACACCAA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKKLMMV*SMSLHQ
Trigger: TTGGTGTAAAGACATACTTCAGACCATCATGAGTTT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCTGTGAAGCCCAATTATaGGGAGTGAAACTCATGATG +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESCEAQL*GVKLMM
Trigger: CATCATGAGTTTCACTCCTCATAATTGGGCTTCACA...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGCACATTATTTTGTTTaGAGAATGCCTGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRAHYFV*RMPVVG
Trigger: GCCCACTACAGGCATTCTTCAAACAAAATAATGTGC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTAAAACGGCTTTCCTaGGGCACATTATTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLKRLS*GTLFCL
Trigger: CAAACAAAATAATGTGCCTCAGGAAAGCCGTTTTAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAGTTTTCGTTGCTCATTaGCTTCCACTTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRVFVAH*LPLPIL
Trigger: GAGTATAGGAAGTGGAAGTCAATGAGCAACGAAAAC...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR TCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTTTGCTGACCCCCTGCTaGTGTAGAAAACTCATATAC +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRILLTPC*CRKLIY
Trigger: GTATATGAGTTTTCTACATCAGCAGGGGGTCAGCAA...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACACATTTATTGAGTTGCTaGCCCCCTGCTGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTHLLSC*PPADVE
Trigger: TTCTACATCAGCAGGGGGTCAGCAACTCAATAAATG...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACATTTATTGAGTTGCTaGCCCCCTGCTGATGTAGAA +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQHLLSC*PPADVE
Trigger: TTCTACATCAGCAGGGGGTCAGCAACTCAATAAATG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTTTTCAATGCATTTATTaGGTTGCTGACCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIFQCIY*VADPLL
Trigger: CAGCAGGGGGTCAGCAACTCAATAAATGCATTGAAA...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACAGCAACTGAATTATaGAATAACAAACCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTATEL*NNKPGL
Trigger: AAGCCCAGGTTTGTTATTTCATAATTCAGTTGCTGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATATAAGCCTCCTAGATaGTCCAGTAGAGTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQYKPPR*SSRVSS
Trigger: ACTGGAGACTCTACTGGATCATCTAGGAGGCTTATA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCCTTGGCACTAAAGGCTaGCTTTTTAGGACAACATTT +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLLGTKG*LFRTTF
Trigger: AAATGTTGTCCTAAAAAGTCAGCCTTTAGTGCCAAG...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATAAAATGCTCTGCAGTTaGGTCTCCATCTGTACTATC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYKMLCS*VSICTI
Trigger: GATAGTACAGATGGAGACGCAACTGCAGAGCATTTT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTTATAACCTCTCTTGCTaGCAGAAGCTGCTGTACAAC +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIYNLSC*QKLLYN
Trigger: GTTGTACAGCAGCTTCTGGCAGCAAGAGAGGTTATA...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCTTTCCAAGATATATaGTATAACCTCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSFQDI*YNLSCC
Trigger: GCAGCAAGAGAGGTTATAGCATATATCTTGGAAAGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATTAAACCTAGCATATTaGAGACCATATCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWALNLAY*RPYPWN
Trigger: ATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTAAACCTAGCATATTaGAGACCATATCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLNLAY*RPYPWN
Trigger: ATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCTTTTATCACCCTGGTTaGAATGCTGTGAATAAGGCT +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLFYHPG*NAVNKA
Trigger: AGCCTTATTCACAGCATTGCAACCAGGGTGATAAAA...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAATCTGTTACATGAGTTaGTCTAGCCAAGGTCAATAT +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAICYMS*SSQGQY
Trigger: ATATTGACCTTGGCTAGAGCAACTCATGTAACAGAT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATCTGTTACATGAGTTaGTCTAGCCAAGGTCAATAT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKICYMS*SSQGQY
Trigger: ATATTGACCTTGGCTAGAGCAACTCATGTAACAGAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATATACCAGGAAATCTaGAAATGTCCTCACATGGGC +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRIYQEI*KCPHMG
Trigger: GCCCATGTGAGGACATTTGCAGATTTCCTGGTATAT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATTCATTCTGTAACCAGTaGTCTGGGGAATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYSFCNQ*SGEFSF
Trigger: GAAGGAAAATTCCCCAGAGCACTGGTTACAGAATGA...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATTTTCGTTTGAGAAATaGGCGGTCTCTCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQFSFEK*AVSQVH
Trigger: ATGCACCTGAGAGACCGCGCATTTCTCAAACGAAAA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACATTTTCGTTTGAGAAATaGGCGGTCTCTCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTFSFEK*AVSQVH
Trigger: ATGCACCTGAGAGACCGCGCATTTCTCAAACGAAAA...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGGTCTGCCAATCAATCTaGAATAGTAGGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRVCQSI*NSRCHL
Trigger: CAGATGACACCTACTATTGCAGATTGATTGGCAGAC...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGTCTGCCAATCAATCTaGAATAGTAGGTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRVCQSI*NSRCHL
Trigger: CAGATGACACCTACTATTGCAGATTGATTGGCAGAC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAATTGCATTCATCCATaGTGTAATGTTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKNCIHP*CNVLSW
Trigger: CCAAGAGAGAACATTACAGCATGGATGAATGCAATT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTTGTAATTTAAATGGGTaGTACACTGGTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLCNLNG*YTGQHS
Trigger: TGAATGTTGACCAGTGTAGCACCCATTTAAATTACA...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATACAGCGACCACAAATaGAGTTTATCCTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQYSDHK*SLSLLW
Trigger: CCACAGCAAGGATAAACTCCATTTGTGGTCGCTGTA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGCAGATCCTTATCATATaGCAAAAGGCCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWQILII*QKAFQR
Trigger: CCTTTGAAAGGCCTTTTGCCATATGATAAGGATCTG...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACATCTCAGATCGCTCCATaGCATAAACAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTSQIAP*HKQPDP
Trigger: TGGATCTGGTTGTTTATGCCATGGAGCGATCTGAGA...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTTCTCAGATCGCTCCATaGCATAAACAACCAGATCCA +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRISQIAP*HKQPDP
Trigger: TGGATCTGGTTGTTTATGCCATGGAGCGATCTGAGA...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAAGAAAGCACCATATGTaGAAAACTTGCAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWARKHHM*KTCKLE
Trigger: TTCCAGTTTGCAAGTTTTCCACATATGGTGCTTTCT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAAGAAAGCACCATATGTaGAAAACTTGCAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGRKHHM*KTCKLE
Trigger: TTCCAGTTTGCAAGTTTTCCACATATGGTGCTTTCT...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGAAAGCACCATATGTaGAAAACTTGCAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRKHHM*KTCKLE
Trigger: TTCCAGTTTGCAAGTTTTCCACATATGGTGCTTTCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAGTCATTGCAAAGGCATaGGTTGACTGGGGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQVIAKA*VDWGLL
Trigger: TAACAAACCCCAGTCAACCCATGCCTTTGCAATGAC...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATACACAAAGATGGAGCTaGTTCTGGTTTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYTQRWS*FWFVCA
Trigger: TGCACAAACAAACCAGAACCAGCTCCATCTTTGTGT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACTCTCGACACAAAGATaGAGCTGGTTCTGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQLSTQR*SWFWFV
Trigger: AACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCCCCTGCATAGAGAAGTaGGTAATAATGTCGTTTTCG +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESPCIEK*VIMSFS
Trigger: CGAAAACGACATTATTACCCACTTCTCTATGCAGGG...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAGAGTCTCCAGTGATTTaGATACCGGAAGCAACTCTA +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTESPVI*IPEATL
Trigger: TAGAGTTGCTTCCGGTATCCAAATCACTGGAGACTC...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAGAGCCAATGATCGCATaGACGAGTTTTCGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQEPMIA*TSFRLR
Trigger: TCTCAAACGAAAACTCGTCCATGCGATCATTGGCTC...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATATAGTAGGTGTCATCTaGAACCCAAGGATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYIVGVI*NPRIFL
Trigger: GAGGAAAATCCTTGGGTTCCAGATGACACCTACTAT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACATTACACCAAGTTCCCTaGATTGAATCAGAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTLHQVP*IESEPV
Trigger: TACAGGCTCTGATTCAATTCAGGGAACTTGGTGTAA...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATTACACCAAGTTCCCTaGATTGAATCAGAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQLHQVP*IESEPV
Trigger: TACAGGCTCTGATTCAATTCAGGGAACTTGGTGTAA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAGCACATTATTTTGTTTaGAGAATGCCTGTAGTGGGC +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQAHYFV*RMPVVG
Trigger: GCCCACTACAGGCATTCTTCAAACAAAATAATGTGC...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTGTTTTCGTTGCTCATTaGCTTCCACTTCCTATACTC +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIVFVAH*LPLPIL
Trigger: GAGTATAGGAAGTGGAAGTCAATGAGCAACGAAAAC...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGACAGCAACTGAATTATaGAATAACAAACCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWTATEL*NNKPGL
Trigger: AAGCCCAGGTTTGTTATTTCATAATTCAGTTGCTGT...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCACAGCAACTGAATTATaGAATAACAAACCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLTATEL*NNKPGL
Trigger: AAGCCCAGGTTTGTTATTTCATAATTCAGTTGCTGT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGCTTGGCACTAAAGGCTaGCTTTTTAGGACAACATTT +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRLGTKG*LFRTTF
Trigger: AAATGTTGTCCTAAAAAGTCAGCCTTTAGTGCCAAG...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGTCTTTCCAAGATATATaGTATAACCTCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWSFQDI*YNLSCC
Trigger: GCAGCAAGAGAGGTTATAGCATATATCTTGGAAAGA...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAACATATGTGGAAAACTTaGAAACTGGAAAAGCACAAA +
Preference number: 4 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQHMWKT*KLEKHK
Trigger: TTTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATG...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGACATATGTGGAAAACTTaGAAACTGGAAAAGCACAAA +
Preference number: 4 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGHMWKT*KLEKHK
Trigger: TTTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATG...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACATATGTGGAAAACTTaGAAACTGGAAAAGCACAAA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKHMWKT*KLEKHK
Trigger: TTTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGCTTCCAGAAATGAATTaGAGGAGAACCCACATAAGA +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRLPEMN*RRTHIR
Trigger: TCTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAG...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATCTTCCAGAAATGAATTaGAGGAGAACCCACATAAGA +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYLPEMN*RRTHIR
Trigger: TCTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAG...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGTTTTATCACCCTGGTTaGAATGCTGTGAATAAGGCT +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRFYHPG*NAVNKA
Trigger: AGCCTTATTCACAGCATTGCAACCAGGGTGATAAAA...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATTTTTATCACCCTGGTTaGAATGCTGTGAATAAGGCT +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYFYHPG*NAVNKA
Trigger: AGCCTTATTCACAGCATTGCAACCAGGGTGATAAAA...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATGTTTGTTTGTGCAACTaGAGCCAAAGTATGAAGATG +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYVCLCN*SQSMKM
Trigger: CATCTTCATACTTTGGCTGCAGTTGCACAAACAAAC...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTGTTCTGGTTTGTTTGTaGAACTGCAGCCAAAGTATG +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIVLVCL*NCSQSM
Trigger: CATACTTTGGCTGCAGTTGCACAAACAAACCAGAAC...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTTCATTCTGTAACCAGTaGTCTGGGGAATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRISFCNQ*SGEFSF
Trigger: GAAGGAAAATTCCCCAGAGCACTGGTTACAGAATGA...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAAGGATTTTCCTCTCGTaGATTCATAGCGCATTTCAG +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTRIFLS*IHSAFQ
Trigger: CTGAAATGCGCTATGAATGCACGAGAGGAAAATCCT...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTAGGATTTTCCTCTCGTaGATTCATAGCGCATTTCAG +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIRIFLS*IHSAFQ
Trigger: CTGAAATGCGCTATGAATGCACGAGAGGAAAATCCT...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGTCGTATCGACTAGTCTaGCAATCAATCTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRSYRLV*QSICNS
Trigger: ACTATTGCAGATTGATTGGCAGACTAGTCGATACGA...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACTCGTATCGACTAGTCTaGCAATCAATCTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNSYRLV*QSICNS
Trigger: ACTATTGCAGATTGATTGGCAGACTAGTCGATACGA...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR GCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGAATTGCATTCATCCATaGTGTAATGTTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWNCIHP*CNVLSW
Trigger: CCAAGAGAGAACATTACAGCATGGATGAATGCAATT...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGATGATCAAACCAATTaGATTCATCCATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKDDQTN*IHPCCN
Trigger: ATTACAGCATGGATGAATGCAATTGGTTTGATCATC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGTAATTTAAATGGGTaGTACACTGGTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKCNLNG*YTGQHS
Trigger: TGAATGTTGACCAGTGTAGCACCCATTTAAATTACA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR GCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATAATCTTCTCTACTTaGTCTTTCACGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRIIFST*SFTLSP
Trigger: TGGTGACAGCGTGAAAGAGCAAGTAGAGAAGATTAT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACAGCGCTGCTTGTGCTaGTTATTTAAACCTAGCATA +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQQRCLC*LFKPSI
Trigger: TATGCTAGGTTTAAATAAGCAGCACAAGCAGCGCTG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACACGAATTATTTACAACTaGCAGAAGACTACAGCGACC +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTRIIYN*QKTTAT
Trigger: GGTCGCTGTAGTCTTCTGCCAGTTGTAAATAATTCG...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGACAGATCCTTATCATATaGCAAAAGGCCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRQILII*QKAFQR
Trigger: CCTTTGAAAGGCCTTTTGCCATATGATAAGGATCTG...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAACACAAAGATGGAGCTaGTTCTGGTTTGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQTQRWS*FWFVCA
Trigger: TGCACAAACAAACCAGAACCAGCTCCATCTTTGTGT...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATACTATATCAAATACTaGAAGGAATCGAAGACACAC +
Preference number: 4 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAYYIKY*KESKTH
Trigger: GTGTGTCTTCGATTCCTTCCAGTATTTGATATAGTA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATACTATATCAAATACTaGAAGGAATCGAAGACACAC +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKYYIKY*KESKTH
Trigger: GTGTGTCTTCGATTCCTTCCAGTATTTGATATAGTA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTATAGTAGGTGTCATCTaGAACCCAAGGATTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIIVGVI*NPRIFL
Trigger: GAGGAAAATCCTTGGGTTCCAGATGACACCTACTAT...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGAGGAAGTCACAGATaGGATCCATGTAATTTAAAT +
Preference number: 4 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRGSHR*DPCNLN
Trigger: ATTTAAATTACATGGATCCCATCTGTGACTTCCTCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR TCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGAAACTCATGATGGTCTaGAGTATGTCTTTACACCAA +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRKLMMV*SMSLHQ
Trigger: TTGGTGTAAAGACATACTTCAGACCATCATGAGTTT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGAAACTCATGATGGTCTaGAGTATGTCTTTACACCAA +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEKLMMV*SMSLHQ
Trigger: TTGGTGTAAAGACATACTTCAGACCATCATGAGTTT...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATAAACTCATGATGGTCTaGAGTATGTCTTTACACCAA +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYKLMMV*SMSLHQ
Trigger: TTGGTGTAAAGACATACTTCAGACCATCATGAGTTT...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGTTAAAACGGCTTTCCTaGGGCACATTATTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRLKRLS*GTLFCL
Trigger: CAAACAAAATAATGTGCCTCAGGAAAGCCGTTTTAA...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR TCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTAAAACGGCTTTCCTaGGGCACATTATTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRLKRLS*GTLFCL
Trigger: CAAACAAAATAATGTGCCTCAGGAAAGCCGTTTTAA...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGACAGCAACTGAATTATaGAATAACAAACCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFETATEL*NNKPGL
Trigger: AAGCCCAGGTTTGTTATTTCATAATTCAGTTGCTGT...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATTCTTTCCAAGATATATaGTATAACCTCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IGKTESANDKSFDHRYLYSFQDI*YNLSCC
Trigger: GCAGCAAGAGAGGTTATAGCATATATCTTGGAAAGA...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAATGTTCAAGGTCTaGTTATTTAAACCTAGCATA +
Preference number: 4 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWAMFKV*LFKPSI
Trigger: TATGCTAGGTTTAAATAAGCAGACCTTGAACATTGC...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR GCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCCATATGTGGAAAACTTaGAAACTGGAAAAGCACAAA +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLHMWKT*KLEKHK
Trigger: TTTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATG...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACACTTCCAGAAATGAATTaGAGGAGAACCCACATAAGA +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTLPEMN*RRTHIR
Trigger: TCTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAG...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAGTTTGTTTGTGCAACTaGAGCCAAAGTATGAAGATG +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTVCLCN*SQSMKM
Trigger: CATCTTCATACTTTGGCTGCAGTTGCACAAACAAAC...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATCGTATCGACTAGTCTaGCAATCAATCTGCAATAGT +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQSYRLV*QSICNS
Trigger: ACTATTGCAGATTGATTGGCAGACTAGTCGATACGA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCAATTGCATTCATCCATaGTGTAATGTTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESNCIHP*CNVLSW
Trigger: CCAAGAGAGAACATTACAGCATGGATGAATGCAATT...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGAATTGCATTCATCCATaGTGTAATGTTCTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFENCIHP*CNVLSW
Trigger: CCAAGAGAGAACATTACAGCATGGATGAATGCAATT...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGATAATCTTCTTTACTTaGTCTTTCACGCTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEIIFFT*SFTLSP
Trigger: TGGTGACAGCGTGAAAGAGCAAGTAAAGAAGATTAT...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368058.5
CDS-3UTR CCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACACAGATCCTTATCATATaGCAAAAGGCCTTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTQILII*QKAFQR
Trigger: CCTTTGAAAGGCCTTTTGCCATATGATAAGGATCTG...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCTACTATATCAAATACTaGAAGGAATCGAAGACACAC +
Preference number: 4 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLYYIKY*KESKTH
Trigger: GTGTGTCTTCGATTCCTTCCAGTATTTGATATAGTA...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR TCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATTAAAACGGCTTTCCTaGGGCACATTATTTTGTTTG +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQLKRLS*GTLFCL
Trigger: CAAACAAAATAATGTGCCTCAGGAAAGCCGTTTTAA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTTCTTTCCAAGATATATaGTATAACCTCTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRISFQDI*YNLSCC
Trigger: GCAGCAAGAGAGGTTATAGCATATATCTTGGAAAGA...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATTAAACCTAGCATATTaGAGACCATATCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQLNLAY*RPYPWN
Trigger: ATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACATTAAACCTAGCATATTaGAGACCATATCCCTGGAAT +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTLNLAY*RPYPWN
Trigger: ATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAA...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCGCAATGTTCAAGGTCTaGTTATTTAAACCTAGCATA +
Preference number: 4 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESAMFKV*LFKPSI
Trigger: TATGCTAGGTTTAAATAAGCAGACCTTGAACATTGC...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368058.5
CDS-3UTR GCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAATCTGTTACATGAGTTaGTCTAGCCAAGGTCAATAT +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQICYMS*SSQGQY
Trigger: ATATTGACCTTGGCTAGAGCAACTCATGTAACAGAT...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAATCTGTTACATGAGTTaGTCTAGCCAAGGTCAATAT +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTICYMS*SSQGQY
Trigger: ATATTGACCTTGGCTAGAGCAACTCATGTAACAGAT...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGATGATCAAACCAATTaGATTCATCCATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRDDQTN*IHPCCN
Trigger: ATTACAGCATGGATGAATGCAATTGGTTTGATCATC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAAGAAAGCACCATATGTaGAAAACTTGCAAACTGGAA +
Preference number: 4 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQRKHHM*KTCKLE
Trigger: TTCCAGTTTGCAAGTTTTCCACATATGGTGCTTTCT...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTGATGATCAAACCAATTaGATTCATCCATGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIDDQTN*IHPCCN
Trigger: ATTACAGCATGGATGAATGCAATTGGTTTGATCATC...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTTGTAATTTAAATGGGTaGTACACTGGTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRICNLNG*YTGQHS
Trigger: TGAATGTTGACCAGTGTAGCACCCATTTAAATTACA...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR GCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACATGTAATTTAAATGGGTaGTACACTGGTCAACATTCA +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTCNLNG*YTGQHS
Trigger: TGAATGTTGACCAGTGTAGCACCCATTTAAATTACA...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTTACTATATCAAATACTaGAAGGAATCGAAGACACAC +
Preference number: 4 (lower is better)
Translates to: NNLNIITASTISLQCDRIYYIKY*KESKTH
Trigger: GTGTGTCTTCGATTCCTTCCAGTATTTGATATAGTA...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CCA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAAGAGGAAGTCACAGATaGGATCCATGTAATTTAAAT +
Preference number: 4 (lower is better)
Translates to: FKRFESTLKDGYISTFSTRGSHR*DPCNLN
Trigger: ATTTAAATTACATGGATCCCATCTGTGACTTCCTCT...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS CCA 90 bp CGCCTTTCCAGGGTGCCCGGCAAGGCCCGGATCAGACTCGAGCTCTaGGAATATAGGGGCAGAGGGGCGGAGACCTCTGGAGGAAACCGT +
Preference number: 5 (lower is better)
Translates to: RLSRVPGKARIRLEL*EYRGRGAETSGGNR
Trigger: ACGGTTTCCTCCAGAGGTCTCCGCCCCTCTGCCCCTATATTCCCAGAGCTCGAGTCTGATCCGGGCCTTGCCGGGCACCCTGGAAAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368060.7
ENST00000368068.8
ENST00000489888.1
CDS GCA 90 bp TGCAGTTGCGTCTCCATCTGTACTATCACCCCCGCCTTTCCAGGGTaGCCGGCAAGGCCCGGATCAGACTCGAGCTCTGGGAATATAGGG +
Preference number: 5 (lower is better)
Translates to: CSCVSICTITPAFPG*PARPGSDSSSGNIG
Trigger: CCCTATATTCCCAGAGCTCGAGTCTGATCCGGGCCTTGCCGGGCACCCTGGAAAGGCGGGGGTGATAGTACAGATGGAGACGCAACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368060.7
ENST00000368068.8
ENST00000489888.1
CDS CCA 90 bp TTGTTCCCCCATCGTCAAACTTCTCCTCGGTCTCAGATCGCTCCATaGCATAAACAACCAGATCCACCAACTGGTCCTCCAGCACAGGGC +
Preference number: 5 (lower is better)
Translates to: LFPHRQTSPRSQIAP*HKQPDPPTGPPAQG
Trigger: GCCCTGTGCTGGAGGACCAGTTGGTGGATCTGGTTGTTTATGCCATGGAGCGATCTGAGACCGAGGAGAAGTTTGACGATGGGGGAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS CCA 90 bp CACCAGCCCTGCGGTCGATTATCCTTCAGAGAGCCAATGATCGCATaGACGAGTTTTCGTTTGAGAAATGCGCGGTCTCTCAGGTGCATT +
Preference number: 5 (lower is better)
Translates to: HQPCGRLSFREPMIA*TSFRLRNARSLRCI
Trigger: AATGCACCTGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCATGCGATCATTGGCTCTCTGAAGGATAATCGACCGCAGGGCTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CCA 90 bp CTCAGAGTAGGACTGATGACAGGCAGTGAAATCAAAGAGGCGGAATaGATAGCCAACCCACTCTGTTTCAGACGTCAAGCTGGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: LRVGLMTGSEIKEAE*IANPLCFRRQAGAA
Trigger: AGCAGCCCCAGCTTGACGTCTGAAACAGAGTGGGTTGGCTATCCATTCCGCCTCTTTGATTTCACTGCCTGTCATCAGTCCTACTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
ENST00000484885.1
CDS CCA 90 bp CACCTGATTAGACTGAGGTGCTGGAGACCCACTGTTCATGGCTTGTaGAGGCACTGCAGCTGGCTCCATCTTGCTAATGTGTGTGATGAA +
Preference number: 5 (lower is better)
Translates to: HLIRLRCWRPTVHGL*RHCSWLHLANVCDE
Trigger: TTCATCACACACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368058.5
ENST00000368068.8
ENST00000479213.1
CDS-3UTR CAA 90 bp AACTGCGGTTGTACCTCTGAGCTACCTAATGCTGTTATAAGCCTGAGAGCAGTGATGCTGCCACAGGAGTaGGCTTGTTCCCCCATCGTC +
Preference number: 5 (lower is better)
Translates to: NCGCTSELPNAVISLRAVMLPQE*ACSPIV
Trigger: GACGATGGGGGAACAAGCCAACTCCTGTGGCAGCAT...CACTGCTCTCAGGCTTATAACAGCATTAGGTAGCTCAGAGGTACAACCGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS CCA 90 bp AACCTGATTAGACTGAGGTGCTGGAGACCCACTGTTCATGGCTTGTaGAGGCACTGCAGCTGGCTCCATCTTGCTAATGTGTGTGATGAA +
Preference number: 5 (lower is better)
Translates to: NLIRLRCWRPTVHGL*RHCSWLHLANVCDE
Trigger: TTCATCACACACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368060.7
CDS-3UTR CAA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACACCCACTGTTCATGGCTaGTGGAGGCACTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: NGFMKPPDFLTATSCESTPTVHG*WRHCSW
Trigger: CCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGG...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS CCA 90 bp TTACTGATTAGACTGAGGTGCTGGAGACCCACTGTTCATGGCTTGTaGAGGCACTGCAGCTGGCTCCATCTTGCTAATGTGTGTGATGAA +
Preference number: 5 (lower is better)
Translates to: LLIRLRCWRPTVHGL*RHCSWLHLANVCDE
Trigger: TTCATCACACACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAGCCACAGGAGTTGGCTaGTTCCCCCATCGTCAAACT +
Preference number: 5 (lower is better)
Translates to: NGFMKPPDFLTATSCESTATGVG*FPHRQT
Trigger: AGTTTGACGATGGGGGAACAAGCCAACTCCTGTGGC...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp TGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGTAGCCACAGGAGTTGGCTaGTTCCCCCATCGTCAAACT +
Preference number: 5 (lower is better)
Translates to: CLCNCSQSMKMTQELNSVATGVG*FPHRQT
Trigger: AGTTTGACGATGGGGGAACAAGCCAACTCCTGTGGC...TACAGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp CAGTGCTCTCGACACAAAGATGGAGCTGGTTCTGGTTTGTTTGTGCAACTGCAGCTGGTTCTGGTTTGTTaGTGCAACTGCAGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: QCSRHKDGAGSGLFVQLQLVLVC*CNCSQS
Trigger: ACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAG...CTGCAGTTGCACAAACAAACCAGAACCAGCTCCATCTTTGTGTCGAGAGCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCCACTGTTCATGGCTaGTGGAGGCACTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPTVHG*WRHCSW
Trigger: CCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS TCA 90 bp AGCCAAGGTCAATATCAAGGCTCGGTTCAGTTCTTCAGATTCTGCTaGGAGCACTGTTTTGGGATCACTAAGGAAGCGTGTAAACTGCGG +
Preference number: 5 (lower is better)
Translates to: SQGQYQGSVQFFRFC*EHCFGITKEACKLR
Trigger: CCGCAGTTTACACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGCAGAATCTGAAGAACTGAACCGAGCCTTGATATTGACCTTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS GCA 90 bp CAGGAGATTTGCCAGCCATCGTATCGACTAGTCTGCCAATCAATCTaGAATAGTAGGTGTCATCTGGAACCCAAGGATTTTCCTCTCGTG +
Preference number: 5 (lower is better)
Translates to: QEICQPSYRLVCQSI*NSRCHLEPKDFPLV
Trigger: CACGAGAGGAAAATCCTTGGGTTCCAGATGACACCTACTATTGCAGATTGATTGGCAGACTAGTCGATACGATGGCTGGCAAATCTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CCA 90 bp ATAAACGACTGTAAGTTTCCACTAGGGCTGGAGCCAAGGCCACACTaGACTTTGCATGAGCAAGTTTTATCACCCTGGTTGCAATGCTGT +
Preference number: 5 (lower is better)
Translates to: INDCKFPLGLEPRPH*TLHEQVLSPWLQCC
Trigger: ACAGCATTGCAACCAGGGTGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCTTGGCTCCAGCCCTAGTGGAAACTTACAGTCGTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAATGCTGCCACAGGAGTaGGCTTGTTCCCCCATCGTC +
Preference number: 5 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGMLPQE*ACSPIV
Trigger: GACGATGGGGGAACAAGCCAACTCCTGTGGCAGCAT...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATGCTGCCACAGGAGTaGGCTTGTTCCCCCATCGTC +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKMLPQE*ACSPIV
Trigger: GACGATGGGGGAACAAGCCAACTCCTGTGGCAGCAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS TCA 90 bp ACGTATAGCTACAACTCATCTCAGAGTAGGACTGATGACAGGCAGTaGAATCAAAGAGGCGGAATGGATAGCCAACCCACTCTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: TYSYNSSQSRTDDRQ*NQRGGMDSQPTLFQ
Trigger: CTGAAACAGAGTGGGTTGGCTATCCATTCCGCCTCTTTGATTTCACTGCCTGTCATCAGTCCTACTCTGAGATGAGTTGTAGCTATACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
ENST00000484885.1
CDS GCA 90 bp TCTGCTGAGAGCACTGTTTTGGGATCACTAAGGAAGCGTGTAAACTaGGGTTGTACCTCTGAGCTACCTAATGCTGTTATAAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: SAESTVLGSLRKRVN*GCTSELPNAVISLR
Trigger: TCTCAGGCTTATAACAGCATTAGGTAGCTCAGAGGTACAACCGCAGTTTACACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CTACCTAATGCTGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGAGCAACCAGTGTGGAAGTTaGCCTTCAGGATACAGTTTC +
Preference number: 5 (lower is better)
Translates to: LPNAVISLRAVLSTQRWSNQCGS*PSGYSF
Trigger: GAAACTGTATCCTGAAGGCAAACTTCCACACTGGTT...GCTCCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACAGCATTAGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGCCACAGGAGTTGGCTaGTTCCCCCATCGTCAAACT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKATGVG*FPHRQT
Trigger: AGTTTGACGATGGGGGAACAAGCCAACTCCTGTGGC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CTGGTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTGGGTTGACTGGGGTTaGTTAATATCAGGAACTGGG +
Preference number: 5 (lower is better)
Translates to: LVCLCNCSQSMKMTQELNWVDWG*LISGTG
Trigger: CCCAGTTCCTGATATTAACAAACCCCAGTCAACCCA...GTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp TGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGAGCTGGTTCTGGTTTCCAAATACAGGTCATaGCAAAGGCATGGGTTGACT +
Preference number: 5 (lower is better)
Translates to: CYKPESSALDTKMELVLVSKYRS*QRHGLT
Trigger: AGTCAACCCATGCCTTTGCAATGACCTGTATTTGGA...AACCAGAACCAGCTCCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAGCTGAGAGCACTGTTTaGGGATCACTAAGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: NGFMKPPDFLTATSCESTAESTV*GSLRKR
Trigger: ACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGC...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACATGGACGAGTTTTCGTTaGAGAAATGCGCGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: NGFMKPPDFLTATSCESTWTSFR*RNARSL
Trigger: GAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCA...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGCCCACTGTTCATGGCTaGTGGAGGCACTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEPTVHG*WRHCSW
Trigger: CCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGG...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGTAACAGGGCAGCGCTGCTaGTGCTGCTTATTTAAACCT +
Preference number: 5 (lower is better)
Translates to: CLCNCSQSMKMTQELNSVTGQRC*CCLFKP
Trigger: AGGTTTAAATAAGCAGCACAAGCAGCGCTGCCCTGT...TACAGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS TCA 90 bp GAAGACTACAGCGACCACAAATGGAGTTTATCCTTGCTGTGGGCCTaGAGGTATCCACAAAGTCTGATACTAGGTTTCCAAGTAACCAGT +
Preference number: 5 (lower is better)
Translates to: EDYSDHKWSLSLLWA*RYPQSLILGFQVTS
Trigger: ACTGGTTACTTGGAAACCTAGTATCAGACTTTGTGGATACCTTCAGGCCCACAGCAAGGATAAACTCCATTTGTGGTCGCTGTAGTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS-3UTR CAA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATGCTGCCACAGGAGTaGGCTTGTTCCCCCATCGTC +
Preference number: 5 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRMLPQE*ACSPIV
Trigger: GACGATGGGGGAACAAGCCAACTCCTGTGGCAGCAT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp TGTTATAAGCCTGAGAGCAGTGCTCTCGACACAAAGATGGAGCTGGTTCTGGTTACTTCCAGAAATGAATaGCAGGAGAACCCACATAAG +
Preference number: 5 (lower is better)
Translates to: CYKPESSALDTKMELVLVTSRNE*QENPHK
Trigger: CTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAGT...AACCAGAACCAGCTCCATCTTTGTGTCGAGAGCACTGCTCTCAGGCTTATAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACATGGGTTGACTGGGGTTaGTTAATATCAGGAACTGGG +
Preference number: 5 (lower is better)
Translates to: NGFMKPPDFLTATSCESTWVDWG*LISGTG
Trigger: CCCAGTTCCTGATATTAACAAACCCCAGTCAACCCA...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAAGGGACCAGGAGATTaGCCAGCCATCGTATCGACT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKKGPGD*PAIVST
Trigger: AGTCGATACGATGGCTGGCAAATCTCCTGGTCCCTT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAGCATGGGCAGCTGGGTaGGGAAACTCATTGAATCTC +
Preference number: 5 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAAWAAG*GNSLNL
Trigger: GAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGC...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGCATGGGCAGCTGGGTaGGGAAACTCATTGAATCTC +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKAWAAG*GNSLNL
Trigger: GAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACCCACTGTTCATGGCTaGTGGAGGCACTGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQPTVHG*WRHCSW
Trigger: CCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS GCA 90 bp CTTCAGAGAGCCAATGATCGCATGGACGAGTTTTCGTTTGAGAAATaGGCGGTCTCTCAGGTGCATTTCATAATAGTGCAGAGTGTTATA +
Preference number: 5 (lower is better)
Translates to: LQRANDRMDEFSFEK*AVSQVHFIIVQSVI
Trigger: TATAACACTCTGCACTATTATGAAATGCACCTGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCATGCGATCATTGGCTCTCTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS-3UTR CAA 90 bp GTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGAAAATGCTCTGCAGTaGCGTCTCCATCTGTACTAT +
Preference number: 5 (lower is better)
Translates to: VCLCNCSQSMKMTQELNSENALQ*RLHLYY
Trigger: ATAGTACAGATGGAGACGCAACTGCAGAGCATTTTC...AGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCGCCACAGGAGTTGGCTaGTTCCCCCATCGTCAAACT +
Preference number: 5 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESATGVG*FPHRQT
Trigger: AGTTTGACGATGGGGGAACAAGCCAACTCCTGTGGC...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAGCCACAGGAGTTGGCTaGTTCCCCCATCGTCAAACT +
Preference number: 5 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRATGVG*FPHRQT
Trigger: AGTTTGACGATGGGGGAACAAGCCAACTCCTGTGGC...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CAA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAATGCTGCCACAGGAGTaGGCTTGTTCCCCCATCGTC +
Preference number: 5 (lower is better)
Translates to: FKRFESTLKDGYISTFSTMLPQE*ACSPIV
Trigger: GACGATGGGGGAACAAGCCAACTCCTGTGGCAGCAT...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCACTGAAGCCATACAGTTaGTTCCAGGGAGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: YELKLLRLIFSRFLRIWALKPYS*FQGEVS
Trigger: GGATACCTCTCCCTGGAACAAACTGTATGGCTTCAG...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTGAAGCCATACAGTTaGTTCCAGGGAGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLKPYS*FQGEVS
Trigger: GGATACCTCTCCCTGGAACAAACTGTATGGCTTCAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGCTGAGAGCACTGTTTaGGGATCACTAAGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKAESTV*GSLRKR
Trigger: ACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGGACGAGTTTTCGTTaGAGAAATGCGCGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKWTSFR*RNARSL
Trigger: GAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAGGGACCAGGAGATTaGCCAGCCATCGTATCGACT +
Preference number: 5 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLKGPGD*PAIVST
Trigger: AGTCGATACGATGGCTGGCAAATCTCCTGGTCCCTT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGAGGGTTGGGAAACTCATaGAATCTCCAGTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRGLGNS*NLQSQF
Trigger: AAACTGTGACTGGAGATTCAATGAGTTTCCCAACCC...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACAGGGCAGCGCTGCTaGTGCTGCTTATTTAAACCT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTGQRC*CCLFKP
Trigger: AGGTTTAAATAAGCAGCACAAGCAGCGCTGCCCTGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS GCA 90 bp TGTGATAGAGGAAGTCACAGATGGGATCCATGTAATTTAAATGGGTaGTACACTGGTCAACATTCAGCAGCATGTCATAAAACGCCACAC +
Preference number: 5 (lower is better)
Translates to: CDRGSHRWDPCNLNG*YTGQHSAACHKTPH
Trigger: GTGTGGCGTTTTATGACATGCTGCTGAATGTTGACCAGTGTAGCACCCATTTAAATTACATGGATCCCATCTGTGACTTCCTCTATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS-3UTR CAA 90 bp ATGACTCAGGAGCTGAACTCTGTAATGAGGCTGAATATGATGCATCCGGTAGCTCCATATGTGGAAAACTaGCAAACTGGAAAAGCACAA +
Preference number: 5 (lower is better)
Translates to: MTQELNSVMRLNMMHPVAPYVEN*QTGKAQ
Trigger: TTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATGG...AGCTACCGGATGCATCATATTCAGCCTCATTACAGAGTTCAGCTCCTGAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGGGTTGACTGGGGTTaGTTAATATCAGGAACTGGG +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKWVDWG*LISGTG
Trigger: CCCAGTTCCTGATATTAACAAACCCCAGTCAACCCA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCACTGGTTCTGGTTTGTTaGTGCAACTGCAGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: YELKLLRLIFSRFLRIWALVLVC*CNCSQS
Trigger: ACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAG...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTGGTTCTGGTTTGTTaGTGCAACTGCAGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLVLVC*CNCSQS
Trigger: ACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCTGGACGAGTTTTCGTTaGAGAAATGCGCGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLWTSFR*RNARSL
Trigger: GAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCA...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGAAGGGACCAGGAGATTaGCCAGCCATCGTATCGACT +
Preference number: 5 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRKGPGD*PAIVST
Trigger: AGTCGATACGATGGCTGGCAAATCTCCTGGTCCCTT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAATCTCCAGTCACAGTTaGGAAAGGGACCAGGAGATT +
Preference number: 5 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAISSHS*ERDQEI
Trigger: AATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGAT...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATCTCCAGTCACAGTTaGGAAAGGGACCAGGAGATT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKISSHS*ERDQEI
Trigger: AATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGCATGGGCAGCTGGGTaGGGAAACTCATTGAATCTC +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRAWAAG*GNSLNL
Trigger: GAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTTGGAATGAGAGAAAGTaGTCCGATGCTAGAATGGTG +
Preference number: 5 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLWNERK*SDARMV
Trigger: CACCATTCTAGCATCGGACAACTTTCTCTCATTCCA...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS CCA 90 bp GCTTGTGCTGCTTATTTAAACCTAGCATATTGCAGACCATATCCCTaGAATAAGGCTGCTCCAATACATATCTCAACAAAGCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: ACAAYLNLAYCRPYP*NKAAPIHISTKQSV
Trigger: CACAGACTGCTTTGTTGAGATATGTATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAATAAGCAGCACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS-3UTR CAA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAGAAAATGCTCTGCAGTaGCGTCTCCATCTGTACTAT +
Preference number: 5 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQENALQ*RLHLYY
Trigger: ATAGTACAGATGGAGACGCAACTGCAGAGCATTTTC...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGAAAATGCTCTGCAGTaGCGTCTCCATCTGTACTAT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKENALQ*RLHLYY
Trigger: ATAGTACAGATGGAGACGCAACTGCAGAGCATTTTC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAAACCAGTGTGGAAGTTaGCCTTCAGGATACAGTTTC +
Preference number: 5 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQNQCGS*PSGYSF
Trigger: GAAACTGTATCCTGAAGGCAAACTTCCACACTGGTT...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAACCAGTGTGGAAGTTaGCCTTCAGGATACAGTTTC +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKNQCGS*PSGYSF
Trigger: GAAACTGTATCCTGAAGGCAAACTTCCACACTGGTT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp GTTTGTTTGTGCAACTGCAGCCAAAGTATGAAGATGACTCAGGAGCTGAACTCTTTTAAACCTAGCATATaGCAGACCATATCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: VCLCNCSQSMKMTQELNSFKPSI*QTISLE
Trigger: TTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAA...AGAGTTCAGCTCCTGAGTCATCTTCATACTTTGGCTGCAGTTGCACAAACAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp CTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACCATATGTGGAAAACTaGCAAACTGGAAAAGCACAA +
Preference number: 5 (lower is better)
Translates to: LPGHTYSSKESVMTEHLRPYVEN*QTGKAQ
Trigger: TTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATGG...TCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATCCAAATACAGGTCATaGCAAAGGCATGGGTTGACT +
Preference number: 5 (lower is better)
Translates to: YELKLLRLIFSRFLRIWASKYRS*QRHGLT
Trigger: AGTCAACCCATGCCTTTGCAATGACCTGTATTTGGA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATCCAAATACAGGTCATaGCAAAGGCATGGGTTGACT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKSKYRS*QRHGLT
Trigger: AGTCAACCCATGCCTTTGCAATGACCTGTATTTGGA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATCCAAATACAGGTCATaGCAAAGGCATGGGTTGACT +
Preference number: 5 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGSKYRS*QRHGLT
Trigger: AGTCAACCCATGCCTTTGCAATGACCTGTATTTGGA...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGCTGAAGCCATACAGTTaGTTCCAGGGAGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRLKPYS*FQGEVS
Trigger: GGATACCTCTCCCTGGAACAAACTGTATGGCTTCAG...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGCTGAAGCCATACAGTTaGTTCCAGGGAGAGGTATCC +
Preference number: 5 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFELKPYS*FQGEVS
Trigger: GGATACCTCTCCCTGGAACAAACTGTATGGCTTCAG...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAAAGGCCACACTGGACTTaGCATGAGCAAGTTTTATCA +
Preference number: 5 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQRPHWT*HEQVLS
Trigger: TGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCT...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAGGCCACACTGGACTTaGCATGAGCAAGTTTTATCA +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRPHWT*HEQVLS
Trigger: TGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGCTGAGAGCACTGTTTaGGGATCACTAAGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRAESTV*GSLRKR
Trigger: ACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp AATGGATTTATGAAACCCCCAGATTTCCTTACAGCCACGAGCTGTGAATCCACAATAATGTCGTTTTCGTaGCTCATTGACTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: NGFMKPPDFLTATSCESTIMSFS*LIDFHF
Trigger: GAAGTGGAAGTCAATGAGCAACGAAAACGACATTAT...TGTGGATTCACAGCTCGTGGCTGTAAGGAAATCTGGGGGTTTCATAAATCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTGGACGAGTTTTCGTTaGAGAAATGCGCGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRWTSFR*RNARSL
Trigger: GAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCA...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAAAGACGGAGGGTTGGGAAACTCATaGAATCTCCAGTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: YSVIAFRFKRFESTLKDGGLGNS*NLQSQF
Trigger: AAACTGTGACTGGAGATTCAATGAGTTTCCCAACCC...TCCGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGGGTTGGGAAACTCATaGAATCTCCAGTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKGLGNS*NLQSQF
Trigger: AAACTGTGACTGGAGATTCAATGAGTTTCCCAACCC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTGCATGGGCAGCTGGGTaGGGAAACTCATTGAATCTC +
Preference number: 5 (lower is better)
Translates to: NNLNIITASTISLQCDRIAWAAG*GNSLNL
Trigger: GAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGC...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATGGAATGAGAGAAAGTaGTCCGATGCTAGAATGGTG +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKWNERK*SDARMV
Trigger: CACCATTCTAGCATCGGACAACTTTCTCTCATTCCA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAGATAATCTTCTCTACTaGCTCTTTCACGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: YELKLLRLIFSRFLRIWADNLLY*LFHAVT
Trigger: GGTGACAGCGTGAAAGAGCAAGTAGAGAAGATTATC...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAGATAATCTTCTCTACTaGCTCTTTCACGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKDNLLY*LFHAVT
Trigger: GGTGACAGCGTGAAAGAGCAAGTAGAGAAGATTATC...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGACAGGGCAGCGCTGCTaGTGCTGCTTATTTAAACCT +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRTGQRC*CCLFKP
Trigger: AGGTTTAAATAAGCAGCACAAGCAGCGCTGCCCTGT...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS GCA 90 bp TGTGCTGAGCAATGTTCAAGGTCTGCTTATTTAAACCTAGCATATTaGAGACCATATCCCTGGAATAAGGCTGCTCCAATACATATCTCA +
Preference number: 5 (lower is better)
Translates to: CAEQCSRSAYLNLAY*RPYPWNKAAPIHIS
Trigger: TGAGATATGTATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAATAAGCAGACCTTGAACATTGCTCAGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
CDS CCA 90 bp TCAAGGTCTGCTTATTTAAACCTAGCATATTGCAGACCATATCCCTaGAATAAGGCTGCTCCAATACATATCTCAACAAAGCAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: SRSAYLNLAYCRPYP*NKAAPIHISTKQSV
Trigger: CACAGACTGCTTTGTTGAGATATGTATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAATAAGCAGACCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
CDS-3UTR CAA 90 bp GGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTAGACTTCAACAGTCTCAACTGCCATaGCTAAGCAGTCATAAAGAA +
Preference number: 5 (lower is better)
Translates to: GHTYSSKESVMTEHLRLQQSQLP*LSSHKE
Trigger: TTCTTTATGACTGCTTAGCAATGGCAGTTGAGACTG...TTGAAGTCTAAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAACTTCCAGAAATGAATaGCAGGAGAACCCACATAAG +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKTSRNE*QENPHK
Trigger: CTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAGT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTGGGTTGACTGGGGTTaGTTAATATCAGGAACTGGG +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRWVDWG*LISGTG
Trigger: CCCAGTTCCTGATATTAACAAACCCCAGTCAACCCA...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCCTGGTTCTGGTTTGTTaGTGCAACTGCAGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESLVLVC*CNCSQS
Trigger: ACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAG...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAGCTGAGAGCACTGTTTaGGGATCACTAAGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQAESTV*GSLRKR
Trigger: ACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGC...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACGTTTTCGTTGCTCATaGACTTCCACTTCCTATACT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKRFRCS*TSTSYT
Trigger: AGTATAGGAAGTGGAAGTCAATGAGCAACGAAAACG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGATCTCCAGTCACAGTTaGGAAAGGGACCAGGAGATT +
Preference number: 5 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEISSHS*ERDQEI
Trigger: AATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGAT...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TTTCTGCCTGGGCACACTTATTCTAGTAAAGAGAGTGTGATGACAGAACACCTTCTTAATTTGGAACCCTaGCTGTGTACTCTGACTTTT +
Preference number: 5 (lower is better)
Translates to: FLPGHTYSSKESVMTEHLLNLEP*LCTLTF
Trigger: AAAAGTCAGAGTACACAGCAAGGGTTCCAAATTAAG...AAGGTGTTCTGTCATCACACTCTCTTTACTAGAATAAGTGTGCCCAGGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGGAAAATGCTCTGCAGTaGCGTCTCCATCTGTACTAT +
Preference number: 5 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFEENALQ*RLHLYY
Trigger: ATAGTACAGATGGAGACGCAACTGCAGAGCATTTTC...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGAACCAGTGTGGAAGTTaGCCTTCAGGATACAGTTTC +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRNQCGS*PSGYSF
Trigger: GAAACTGTATCCTGAAGGCAAACTTCCACACTGGTT...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATTTAAACCTAGCATATaGCAGACCATATCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: YELKLLRLIFSRFLRIWAFKPSI*QTISLE
Trigger: TTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAATTTAAACCTAGCATATaGCAGACCATATCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKFKPSI*QTISLE
Trigger: TTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAA...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACCATATGTGGAAAACTaGCAAACTGGAAAAGCACAA +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKPYVEN*QTGKAQ
Trigger: TTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATGG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATGGGTTGACTGGGGTTaGTTAATATCAGGAACTGGG +
Preference number: 5 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQWVDWG*LISGTG
Trigger: CCCAGTTCCTGATATTAACAAACCCCAGTCAACCCA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCAGGCCACACTGGACTTaGCATGAGCAAGTTTTATCA +
Preference number: 5 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESRPHWT*HEQVLS
Trigger: TGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCT...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACAGGCCACACTGGACTTaGCATGAGCAAGTTTTATCA +
Preference number: 5 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNRPHWT*HEQVLS
Trigger: TGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCT...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CAA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACTGGTTCTGGTTTGTTaGTGCAACTGCAGCCAAAGT +
Preference number: 5 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQLVLVC*CNCSQS
Trigger: ACTTTGGCTGCAGTTGCACAAACAAACCAGAACCAG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAATAATGTCGTTTTCGTaGCTCATTGACTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKIMSFS*LIDFHF
Trigger: GAAGTGGAAGTCAATGAGCAACGAAAACGACATTAT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAATCTCCAGTCACAGTTaGGAAAGGGACCAGGAGATT +
Preference number: 5 (lower is better)
Translates to: FKRFESTLKDGYISTFSTISSHS*ERDQEI
Trigger: AATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGAT...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTGGAATGAGAGAAAGTaGTCCGATGCTAGAATGGTG +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRWNERK*SDARMV
Trigger: CACCATTCTAGCATCGGACAACTTTCTCTCATTCCA...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp AAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGAAACGATAATCTTCTCTACTaGCTCTTTCACGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: KFKSIAKVIKLPVDLDRNDNLLY*LFHAVT
Trigger: GGTGACAGCGTGAAAGAGCAAGTAGAGAAGATTATC...GTTTCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CAA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGTTGCTTCCTCTTAATTaGGAACCCTTGCTGTGTACT +
Preference number: 5 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWLLPLN*EPLLCT
Trigger: AGTACACAGCAAGGGTTCCAAATTAAGAGGAAGCAA...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS TCA 90 bp GTCATTAAGAATTTCAATGCATTTATTGAGTTGCTGACCCCCTGCTaGTGTAGAAAACTCATATACCAGGAAATCTGCAAATGTCCTCAC +
Preference number: 5 (lower is better)
Translates to: VIKNFNAFIELLTPC*CRKLIYQEICKCPH
Trigger: GTGAGGACATTTGCAGATTTCCTGGTATATGAGTTTTCTACATCAGCAGGGGGTCAGCAACTCAATAAATGCATTGAAATTCTTAATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS CCA 90 bp AGAGTCTCCAGTGATTTGGATACCGGAAGCAACTCTAAAAATCTGTaGATTACTATATCAAATACTGGAAGGAATCGAAGACACACATTC +
Preference number: 5 (lower is better)
Translates to: RVSSDLDTGSNSKNL*ITISNTGRNRRHTF
Trigger: GAATGTGTGTCTTCGATTCCTTCCAGTATTTGATATAGTAATCCACAGATTTTTAGAGTTGCTTCCGGTATCCAAATCACTGGAGACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS-3UTR CAA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACAAACCAGTGTGGAAGTTaGCCTTCAGGATACAGTTTC +
Preference number: 5 (lower is better)
Translates to: FKRFESTLKDGYISTFSTNQCGS*PSGYSF
Trigger: GAAACTGTATCCTGAAGGCAAACTTCCACACTGGTT...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGACTTCCAGAAATGAATaGCAGGAGAACCCACATAAG +
Preference number: 5 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRTSRNE*QENPHK
Trigger: CTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAGT...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGACTTCCAGAAATGAATaGCAGGAGAACCCACATAAG +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRTSRNE*QENPHK
Trigger: CTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAGT...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGACTTCCAGAAATGAATaGCAGGAGAACCCACATAAG +
Preference number: 5 (lower is better)
Translates to: LLLLYHYSVIAFRFKRFETSRNE*QENPHK
Trigger: CTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAGT...CTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACATCCAAATACAGGTCATaGCAAAGGCATGGGTTGACT +
Preference number: 5 (lower is better)
Translates to: FKRFESTLKDGYISTFSTSKYRS*QRHGLT
Trigger: AGTCAACCCATGCCTTTGCAATGACCTGTATTTGGA...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAACTTGGAGTTGTCATTTaGAGCTTTTCTATTGAGATG +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKLGVVI*SFSIEM
Trigger: CATCTCAATAGAAAAGCTCAAAATGACAACTCCAAG...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368060.7
ENST00000368068.8
CDS-3UTR CAA 90 bp CCAAAGTATGAAGATGACTCAGGAGCTGAACTCTGTAATGAGGCTGAATATGATCTTGGAGTTGTCATTTaGAGCTTTTCTATTGAGATG +
Preference number: 5 (lower is better)
Translates to: PKYEDDSGAELCNEAEYDLGVVI*SFSIEM
Trigger: CATCTCAATAGAAAAGCTCAAAATGACAACTCCAAG...ATCATATTCAGCCTCATTACAGAGTTCAGCTCCTGAGTCATCTTCATACTTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539158.1
CDS-3UTR CAA 90 bp AAGACAATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGCGTTTTCGTTGCTCATaGACTTCCACTTCCTATACT +
Preference number: 5 (lower is better)
Translates to: KTMYELKLLRLIFSRFLRRFRCS*TSTSYT
Trigger: AGTATAGGAAGTGGAAGTCAATGAGCAACGAAAACG...CCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACATTGTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATCGTTTTCGTTGCTCATaGACTTCCACTTCCTATACT +
Preference number: 5 (lower is better)
Translates to: IGKTESANDKSFDHRYLYRFRCS*TSTSYT
Trigger: AGTATAGGAAGTGGAAGTCAATGAGCAACGAAAACG...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCCGTTTTCGTTGCTCATaGACTTCCACTTCCTATACT +
Preference number: 5 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESRFRCS*TSTSYT
Trigger: AGTATAGGAAGTGGAAGTCAATGAGCAACGAAAACG...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAGGGTTGGGAAACTCATaGAATCTCCAGTCACAGTTT +
Preference number: 5 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQGLGNS*NLQSQF
Trigger: AAACTGTGACTGGAGATTCAATGAGTTTCCCAACCC...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TTTAAAAGGTTTGAGTCCACTCTCAAAGACGGATATATTTCTACTTTCTCCACATGGAATGAGAGAAAGTaGTCCGATGCTAGAATGGTG +
Preference number: 5 (lower is better)
Translates to: FKRFESTLKDGYISTFSTWNERK*SDARMV
Trigger: CACCATTCTAGCATCGGACAACTTTCTCTCATTCCA...TGTGGAGAAAGTAGAAATATATCCGTCTTTGAGAGTGGACTCAAACCTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp TATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCATTGAAACTACTAAGGTaGATTTTCTCCAGGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YELKLLRLIFSRFLRIWALKLLR*IFSRFL
Trigger: GAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAA...TGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp TCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGGATAATCTTCTTTACTaGCTCTTTCACGCTGTCACC +
Preference number: 5 (lower is better)
Translates to: SSLLLLYHYSVIAFRFKRDNLLY*LFHAVT
Trigger: GGTGACAGCGTGAAAGAGCAAGTAAAGAAGATTATC...CCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368058.5
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAAAGAATATGAAGCCTaGTTTGCTCCTACAATGCAA +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKKEYEA*FAPTMQ
Trigger: TTGCATTGTAGGAGCAAACAAGGCTTCATATTCTTT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CAA 90 bp CAGCAGACTTTACTCATTAGTTTTCAAGTCTTTCGCAATGCCAATTCCCCCAAAAACTGCCAGTTGACCTaGATAGAAACTATGGAAATT +
Preference number: 5 (lower is better)
Translates to: QQTLLISFQVFRNANSPKNCQLT*IETMEI
Trigger: AATTTCCATAGTTTCTATCAAGGTCAACTGGCAGTT...TTTGGGGGAATTGGCATTGCGAAAGACTTGAAAACTAATGAGTAAAGTCTGCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS TCA 90 bp TCTATTGAGATGAATCCAAATACAGGTCATTGCAAAGGCATGGGTTaGCTGGGGTTTGTTAATATCAGGAACTGGGATATATTCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SIEMNPNTGHCKGMG*LGFVNIRNWDIFFF
Trigger: GAAAAAGAATATATCCCAGTTCCTGATATTAACAAACCCCAGTCAACCCATGCCTTTGCAATGACCTGTATTTGGATTCATCTCAATAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS-3UTR CAA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATTTTAAACCTAGCATATaGCAGACCATATCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: IGKTESANDKSFDHRYLYFKPSI*QTISLE
Trigger: TTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAA...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CTTCTACTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCCCATATGTGGAAAACTaGCAAACTGGAAAAGCACAA +
Preference number: 5 (lower is better)
Translates to: LLLYHYSVIAFRFKRFESPYVEN*QTGKAQ
Trigger: TTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATGG...GGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAGTAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp ATGTATGAGTTGAAACTACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGCTTGGAGTTGTCATTTaGAGCTTTTCTATTGAGATG +
Preference number: 5 (lower is better)
Translates to: MYELKLLRLIFSRFLRIWLGVVI*SFSIEM
Trigger: CATCTCAATAGAAAAGCTCAAAATGACAACTCCAAG...CCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGTAGTTTCAACTCATACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS-3UTR CAA 90 bp ATAGGAAAGACTGAAAGTGCCAATGACAAGTCATTTGATCACAGATACCTCTATTCAGATTTAAAAGGTTaGAGTCCACTCTCAAAGACG +
Preference number: 5 (lower is better)
Translates to: IGKTESANDKSFDHRYLYSDLKG*SPLSKT
Trigger: CGTCTTTGAGAGTGGACTCAAACCTTTTAAATCTGA...ATAGAGGTATCTGTGATCAAATGACTTGTCATTGGCACTTTCAGTCTTTCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp CTATATCACTACAGTGTGATCGCATTCAGATTTAAAAGGTTTGAGTCCACTCTCAATATGAAGCCTTGTTaGCTCCTACAATGCAACAAA +
Preference number: 5 (lower is better)
Translates to: LYHYSVIAFRFKRFESTLNMKPC*LLQCNK
Trigger: TTTGTTGCATTGTAGGAGCAAACAAGGCTTCATATT...GAGAGTGGACTCAAACCTTTTAAATCTGAATGCGATCACACTGTAGTGATATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS CCA 90 bp ATTTATATAAGCCTCCTAGATGATCCAGTAGAGTCTCCAGTGATTTaGATACCGGAAGCAACTCTAAAAATCTGTGGATTACTATATCAA +
Preference number: 5 (lower is better)
Translates to: IYISLLDDPVESPVI*IPEATLKICGLLYQ
Trigger: TTGATATAGTAATCCACAGATTTTTAGAGTTGCTTCCGGTATCCAAATCACTGGAGACTCTACTGGATCATCTAGGAGGCTTATATAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS-3UTR CAA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAATTTAAACCTAGCATATaGCAGACCATATCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQFKPSI*QTISLE
Trigger: TTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAA...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAACCATATGTGGAAAACTaGCAAACTGGAAAAGCACAA +
Preference number: 5 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQPYVEN*QTGKAQ
Trigger: TTGTGCTTTTCCAGTTTGCAAGTTTTCCACATATGG...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp AGTAAGTTCAAGTCCATAGCAAAGGTAATAAAACTGCCAGTTGACCTTGATAGACTTGGAGTTGTCATTTaGAGCTTTTCTATTGAGATG +
Preference number: 5 (lower is better)
Translates to: SKFKSIAKVIKLPVDLDRLGVVI*SFSIEM
Trigger: CATCTCAATAGAAAAGCTCAAAATGACAACTCCAAG...TCTATCAAGGTCAACTGGCAGTTTTATTACCTTTGCTATGGACTTGAACTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368068.8
CDS-3UTR CAA 90 bp ATAGATAGGGAGATGGGAGTTATAAGGTGTCAACAGATTCATCATTTGAATCAAATAATGTCGTTTTCGTaGCTCATTGACTTCCACTTC +
Preference number: 5 (lower is better)
Translates to: IDREMGVIRCQQIHHLNQIMSFS*LIDFHF
Trigger: GAAGTGGAAGTCAATGAGCAACGAAAACGACATTAT...TTGATTCAAATGATGAATCTGTTGACACCTTATAACTCCCATCTCCCTATCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS-3UTR CAA 90 bp AACAATCTGAATATCATCACTGCTTCTACTATATCACTACAGTGTGATCGCATTCTTGGAGTTGTCATTTaGAGCTTTTCTATTGAGATG +
Preference number: 5 (lower is better)
Translates to: NNLNIITASTISLQCDRILGVVI*SFSIEM
Trigger: CATCTCAATAGAAAAGCTCAAAATGACAACTCCAAG...AATGCGATCACACTGTAGTGATATAGTAGAAGCAGTGATGATATTCAGATTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368058.5
ENST00000368068.8
CDS CCA 72 bp AGGGTGCCCGGCAAGGCCCGGATCAGACTCGAGCTCTaGGAATATAGGGGCAGAGGGGCGGAGACCTCTGGA +
Preference number: 6 (lower is better)
Translates to: RVPGKARIRLEL*EYRGRGAETSG
Trigger: TCCAGAGGTCTCCGCCCCTCTGCCCCTATATTCCCAGAGCTCGAGTCTGATCCGGGCCTTGCCGGGCACCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368060.7
ENST00000368068.8
ENST00000489888.1
CDS CCA 72 bp AGACTGAGGTGCTGGAGACCCACTGTTCATGGCTTGTaGAGGCACTGCAGCTGGCTCCATCTTGCTAATGTG +
Preference number: 6 (lower is better)
Translates to: RLRCWRPTVHGL*RHCSWLHLANV
Trigger: CACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 90 bp GGGCACCTGATTAGACTGAGGTGCTGGAGACCCACTGTTCATGGCTaGTGGAGGCACTGCAGCTGGCTCCATCTTGCTAATGTGTGTGAT +
Preference number: 6 (lower is better)
Translates to: GHLIRLRCWRPTVHG*WRHCSWLHLANVCD
Trigger: ATCACACACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAGGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368058.5
ENST00000368068.8
ENST00000479213.1
CDS GCA 72 bp CTGTCAGGTGAGAGTGTCAACCTGATTAGACTGAGGTaGTGGAGACCCACTGTTCATGGCTTGTGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: LSGESVNLIRLR*WRPTVHGLWRH
Trigger: GTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAGGTTGACACTCTCACCTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368060.7
CDS TCA 72 bp CATGGAGAGCATGGGCAGCTGGGTTGGGAAACTCATTaGATCTCCAGTCACAGTTTGGAAAGGGACCAGGAG +
Preference number: 6 (lower is better)
Translates to: HGEHGQLGWETH*ISSHSLERDQE
Trigger: CTCCTGGTCCCTTTCCAAACTGTGACTGGAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 72 bp ATTAGACTGAGGTGCTGGAGACCCACTGTTCATGGCTaGTGGAGGCACTGCAGCTGGCTCCATCTTGCTAAT +
Preference number: 6 (lower is better)
Translates to: IRLRCWRPTVHG*WRHCSWLHLAN
Trigger: ATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 90 bp GTCAACCTGATTAGACTGAGGTGCTGGAGACCCACTGTTCATGGCTaGTGGAGGCACTGCAGCTGGCTCCATCTTGCTAATGTGTGTGAT +
Preference number: 6 (lower is better)
Translates to: VNLIRLRCWRPTVHG*WRHCSWLHLANVCD
Trigger: ATCACACACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAGGTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368060.7
CDS CAA 90 bp GCCATGAGCTCCACACAAGTAACATGGAGAGCATGGGCAGCTGGGTaGGGAAACTCATTGAATCTCCAGTCACAGTTTGGAAAGGGACCA +
Preference number: 6 (lower is better)
Translates to: AMSSTQVTWRAWAAG*GNSLNLQSQFGKGP
Trigger: TGGTCCCTTTCCAAACTGTGACTGGAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTCCATGTTACTTGTGTGGAGCTCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS TCA 72 bp AACTGGTCCTCCAGCACAGGGCAGCGCTGCTTGTGCTaGGCAATGTTCAAGGTCTGCTTATTTAAACCTAGC +
Preference number: 6 (lower is better)
Translates to: NWSSSTGQRCLC*AMFKVCLFKPS
Trigger: GCTAGGTTTAAATAAGCAGACCTTGAACATTGCTCAGCACAAGCAGCGCTGCCCTGTGCTGGAGGACCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
CDS CCA 72 bp CATCGTCAAACTTCTCCTCGGTCTCAGATCGCTCCATaGCATAAACAACCAGATCCACCAACTGGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: HRQTSPRSQIAP*HKQPDPPTGPP
Trigger: TGGAGGACCAGTTGGTGGATCTGGTTGTTTATGCCATGGAGCGATCTGAGACCGAGGAGAAGTTTGACGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS CCA 72 bp AGACCCACTGTTCATGGCTTGTGGAGGCACTGCAGCTaGCTCCATCTTGCTAATGTGTGTGATGAATCGAAG +
Preference number: 6 (lower is better)
Translates to: RPTVHGLWRHCS*LHLANVCDESK
Trigger: CTTCGATTCATCACACACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 72 bp TTTCCACTAGGGCTGGAGCCAAGGCCACACTGGACTTaGCATGAGCAAGTTTTATCACCCTGGTTGCAATGC +
Preference number: 6 (lower is better)
Translates to: FPLGLEPRPHWT*HEQVLSPWLQC
Trigger: GCATTGCAACCAGGGTGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCTTGGCTCCAGCCCTAGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS CAA 72 bp ACATGGAGAGCATGGGCAGCTGGGTTGGGAAACTCATaGAATCTCCAGTCACAGTTTGGAAAGGGACCAGGA +
Preference number: 6 (lower is better)
Translates to: TWRAWAAGLGNS*NLQSQFGKGPG
Trigger: TCCTGGTCCCTTTCCAAACTGTGACTGGAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS GCA 72 bp GCTGTGTACTCTGACTTTTTACTGATTAGACTGAGGTaGTGGAGACCCACTGTTCATGGCTTGTGGAGGCAC +
Preference number: 6 (lower is better)
Translates to: AVYSDFLLIRLR*WRPTVHGLWRH
Trigger: GTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAGTAAAAAGTCAGAGTACACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS CCA 72 bp TGTAAGTTTCCACTAGGGCTGGAGCCAAGGCCACACTaGACTTTGCATGAGCAAGTTTTATCACCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: CKFPLGLEPRPH*TLHEQVLSPWL
Trigger: CAACCAGGGTGATAAAACTTGCTCATGCAAAGTCCAGTGTGGCCTTGGCTCCAGCCCTAGTGGAAACTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS CCA 72 bp TGCGGTCGATTATCCTTCAGAGAGCCAATGATCGCATaGACGAGTTTTCGTTTGAGAAATGCGCGGTCTCTC +
Preference number: 6 (lower is better)
Translates to: CGRLSFREPMIA*TSFRLRNARSL
Trigger: GAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCATGCGATCATTGGCTCTCTGAAGGATAATCGACCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CCA 72 bp GGACTGATGACAGGCAGTGAAATCAAAGAGGCGGAATaGATAGCCAACCCACTCTGTTTCAGACGTCAAGCT +
Preference number: 6 (lower is better)
Translates to: GLMTGSEIKEAE*IANPLCFRRQA
Trigger: AGCTTGACGTCTGAAACAGAGTGGGTTGGCTATCCATTCCGCCTCTTTGATTTCACTGCCTGTCATCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
ENST00000484885.1
CDS CAA 90 bp ACACAAGTAACATGGAGAGCATGGGCAGCTGGGTTGGGAAACTCATaGAATCTCCAGTCACAGTTTGGAAAGGGACCAGGAGATTTGCCA +
Preference number: 6 (lower is better)
Translates to: TQVTWRAWAAGLGNS*NLQSQFGKGPGDLP
Trigger: TGGCAAATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTCCATGTTACTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 90 bp GACCCACTGTTCATGGCTTGTGGAGGCACTGCAGCTGGCTCCATCTaGCTAATGTGTGTGATGAATCGAAGACGAAGTTTTAAAGCTGGT +
Preference number: 6 (lower is better)
Translates to: DPLFMACGGTAAGSI*LMCVMNRRRSFKAG
Trigger: ACCAGCTTTAAAACTTCGTCTTCGATTCATCACACACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 90 bp TTTTTACTGATTAGACTGAGGTGCTGGAGACCCACTGTTCATGGCTaGTGGAGGCACTGCAGCTGGCTCCATCTTGCTAATGTGTGTGAT +
Preference number: 6 (lower is better)
Translates to: FLLIRLRCWRPTVHG*WRHCSWLHLANVCD
Trigger: ATCACACACATTAGCAAGATGGAGCCAGCTGCAGTGCCTCCACAAGCCATGAACAGTGGGTCTCCAGCACCTCAGTCTAATCAGTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS TCA 72 bp TGCAAACTGGAAAAGCACAAAGAAAATGAGCTGACTTaGGAGATGCTGCCACAGGAGTTGGCTTGTTCCCCC +
Preference number: 6 (lower is better)
Translates to: CKLEKHKENELT*EMLPQELACSP
Trigger: GGGGGAACAAGCCAACTCCTGTGGCAGCATCTCTCAAGTCAGCTCATTTTCTTTGTGCTTTTCCAGTTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS GCA 72 bp ATCTCCAGTCACAGTTTGGAAAGGGACCAGGAGATTTaGCAGCCATCGTATCGACTAGTCTGCCAATCAATC +
Preference number: 6 (lower is better)
Translates to: ISSHSLERDQEI*QPSYRLVCQSI
Trigger: GATTGATTGGCAGACTAGTCGATACGATGGCTGGCAAATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 72 bp TCCACACAAGTAACATGGAGAGCATGGGCAGCTGGGTaGGGAAACTCATTGAATCTCCAGTCACAGTTTGGA +
Preference number: 6 (lower is better)
Translates to: STQVTWRAWAAG*GNSLNLQSQFG
Trigger: TCCAAACTGTGACTGGAGATTCAATGAGTTTCCCAACCCAGCTGCCCATGCTCTCCATGTTACTTGTGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 90 bp ATCAAGGCTCGGTTCAGTTCTTCAGATTCTGCTGAGAGCACTGTTTaGGGATCACTAAGGAAGCGTGTAAACTGCGGTTGTACCTCTGAG +
Preference number: 6 (lower is better)
Translates to: IKARFSSSDSAESTV*GSLRKRVNCGCTSE
Trigger: CTCAGAGGTACAACCGCAGTTTACACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGCAGAATCTGAAGAACTGAACCGAGCCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS TCA 72 bp TACAACTCATCTCAGAGTAGGACTGATGACAGGCAGTaGAATCAAAGAGGCGGAATGGATAGCCAACCCACT +
Preference number: 6 (lower is better)
Translates to: YNSSQSRTDDRQ*NQRGGMDSQPT
Trigger: AGTGGGTTGGCTATCCATTCCGCCTCTTTGATTTCACTGCCTGTCATCAGTCCTACTCTGAGATGAGTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
ENST00000484885.1
CDS GCA 72 bp GCCAATGATCGCATGGACGAGTTTTCGTTTGAGAAATaGGCGGTCTCTCAGGTGCATTTCATAATAGTGCAG +
Preference number: 6 (lower is better)
Translates to: ANDRMDEFSFEK*AVSQVHFIIVQ
Trigger: CTGCACTATTATGAAATGCACCTGAGAGACCGCGCATTTCTCAAACGAAAACTCGTCCATGCGATCATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS GCA 72 bp GACCAGGAGATTTGCCAGCCATCGTATCGACTAGTCTaGCAATCAATCTGCAATAGTAGGTGTCATCTGGAA +
Preference number: 6 (lower is better)
Translates to: DQEICQPSYRLV*QSICNSRCHLE
Trigger: TTCCAGATGACACCTACTATTGCAGATTGATTGGCAGACTAGTCGATACGATGGCTGGCAAATCTCCTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 72 bp CGGTTCAGTTCTTCAGATTCTGCTGAGAGCACTGTTTaGGGATCACTAAGGAAGCGTGTAAACTGCGGTTGT +
Preference number: 6 (lower is better)
Translates to: RFSSSDSAESTV*GSLRKRVNCGC
Trigger: ACAACCGCAGTTTACACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGCAGAATCTGAAGAACTGAACCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS CAA 72 bp AATCTCCAGTCACAGTTTGGAAAGGGACCAGGAGATTaGCCAGCCATCGTATCGACTAGTCTGCCAATCAAT +
Preference number: 6 (lower is better)
Translates to: NLQSQFGKGPGD*PAIVSTSLPIN
Trigger: ATTGATTGGCAGACTAGTCGATACGATGGCTGGCAAATCTCCTGGTCCCTTTCCAAACTGTGACTGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS TCA 72 bp AGCGACCACAAATGGAGTTTATCCTTGCTGTGGGCCTaGAGGTATCCACAAAGTCTGATACTAGGTTTCCAA +
Preference number: 6 (lower is better)
Translates to: SDHKWSLSLLWA*RYPQSLILGFQ
Trigger: TTGGAAACCTAGTATCAGACTTTGTGGATACCTTCAGGCCCACAGCAAGGATAAACTCCATTTGTGGTCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS TCA 72 bp CTTCCAGAAATGAATTGCAGGAGAACCCACATAAGATaGTCTCTGCCTTTAATCAGTCCTCGCCCTGCTAAC +
Preference number: 6 (lower is better)
Translates to: LPEMNCRRTHIR*SLPLISPRPAN
Trigger: GTTAGCAGGGCGAGGACTGATTAAAGGCAGAGATCATCTTATGTGGGTTCTCCTGCAATTCATTTCTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS TCA 72 bp CAATATCAAGGCTCGGTTCAGTTCTTCAGATTCTGCTaGGAGCACTGTTTTGGGATCACTAAGGAAGCGTGT +
Preference number: 6 (lower is better)
Translates to: QYQGSVQFFRFC*EHCFGITKEAC
Trigger: ACACGCTTCCTTAGTGATCCCAAAACAGTGCTCTCAGCAGAATCTGAAGAACTGAACCGAGCCTTGATATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS GCA 72 bp TGCCAGCCATCGTATCGACTAGTCTGCCAATCAATCTaGAATAGTAGGTGTCATCTGGAACCCAAGGATTTT +
Preference number: 6 (lower is better)
Translates to: CQPSYRLVCQSI*NSRCHLEPKDF
Trigger: AAAATCCTTGGGTTCCAGATGACACCTACTATTGCAGATTGATTGGCAGACTAGTCGATACGATGGCTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 72 bp CCCTGCATAGAGAAGTGGGTAATAATGTCGTTTTCGTaGCTCATTGACTTCCACTTCCTATACTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: PCIEKWVIMSFS*LIDFHFLYSSS
Trigger: GGAGGAGGAGTATAGGAAGTGGAAGTCAATGAGCAACGAAAACGACATTATTACCCACTTCTCTATGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS GCA 72 bp AGCACTGTTTTGGGATCACTAAGGAAGCGTGTAAACTaGGGTTGTACCTCTGAGCTACCTAATGCTGTTATA +
Preference number: 6 (lower is better)
Translates to: STVLGSLRKRVN*GCTSELPNAVI
Trigger: TATAACAGCATTAGGTAGCTCAGAGGTACAACCGCAGTTTACACGCTTCCTTAGTGATCCCAAAACAGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS GCA 72 bp AGCGCTGCTTGTGCTGCTTATTTAAACCTAGCATATTaGAGACCATATCCCTGGAATAAGGCTGCTCCAATA +
Preference number: 6 (lower is better)
Translates to: SAACAAYLNLAY*RPYPWNKAAPI
Trigger: TATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAATAAGCAGCACAAGCAGCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS CAA 90 bp ACTAAGGTTGATTTTCTCCAGGTTTCTCAGGATCTGGGCAGCGTTTaGCTTCCTCTTAATTTGGAACCCTTGCTGTGTACTCTGACTTTT +
Preference number: 6 (lower is better)
Translates to: TKVDFLQVSQDLGSV*LPLNLEPLLCTLTF
Trigger: AAAAGTCAGAGTACACAGCAAGGGTTCCAAATTAAGAGGAAGCAAAACGCTGCCCAGATCCTGAGAAACCTGGAGAAAATCAACCTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354577.8
CDS TCA 72 bp AAACTTGCAAACTGGAAAAGCACAAAGAAAATGAGCTaGCTTGAGAGATGCTGCCACAGGAGTTGGCTTGTT +
Preference number: 6 (lower is better)
Translates to: KLANWKSTKKMS*LERCCHRSWLV
Trigger: AACAAGCCAACTCCTGTGGCAGCATCTCTCAAGTCAGCTCATTTTCTTTGTGCTTTTCCAGTTTGCAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS GCA 72 bp ACTGGACTTTGCATGAGCAAGTTTTATCACCCTGGTTaGAATGCTGTGAATAAGGCTCATTTTGGCATGAAC +
Preference number: 6 (lower is better)
Translates to: TGLCMSKFYHPG*NAVNKAHFGMN
Trigger: GTTCATGCCAAAATGAGCCTTATTCACAGCATTGCAACCAGGGTGATAAAACTTGCTCATGCAAAGTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
CDS CCA 72 bp AGCCTCCTAGATGATCCAGTAGAGTCTCCAGTGATTTaGATACCGGAAGCAACTCTAAAAATCTGTGGATTA +
Preference number: 6 (lower is better)
Translates to: SLLDDPVESPVI*IPEATLKICGL
Trigger: TAATCCACAGATTTTTAGAGTTGCTTCCGGTATCCAAATCACTGGAGACTCTACTGGATCATCTAGGAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS CAA 72 bp TCTGATACTAGGTTTCCAAGTAACCAGTGTGGAAGTTaGCCTTCAGGATACAGTTTCCTGATCTCAGTGACT +
Preference number: 6 (lower is better)
Translates to: SDTRFPSNQCGS*PSGYSFLISVT
Trigger: AGTCACTGAGATCAGGAAACTGTATCCTGAAGGCAAACTTCCACACTGGTTACTTGGAAACCTAGTATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS CAA 72 bp AAGTACTTCAGTAAGAAACTTTGGAATGAGAGAAAGTaGTCCGATGCTAGAATGGTGCCACACAGCATGTGC +
Preference number: 6 (lower is better)
Translates to: KYFSKKLWNERK*SDARMVPHSMC
Trigger: GCACATGCTGTGTGGCACCATTCTAGCATCGGACAACTTTCTCTCATTCCAAAGTTTCTTACTGAAGTACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
ENST00000484885.1
CDS GCA 72 bp AAGATATATGCTATAACCTCTCTTGCTGCCAGAAGCTaGTGTACAACAGCAGAGCTCACTGTATTAGGAATT +
Preference number: 6 (lower is better)
Translates to: KIYAITSLAARS*CTTAELTVLGI
Trigger: AATTCCTAATACAGTGAGCTCTGCTGTTGTACAGCAGCTTCTGGCAGCAAGAGAGGTTATAGCATATATCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS GCA 72 bp GGAAGTCACAGATGGGATCCATGTAATTTAAATGGGTaGTACACTGGTCAACATTCAGCAGCATGTCATAAA +
Preference number: 6 (lower is better)
Translates to: GSHRWDPCNLNG*YTGQHSAACHK
Trigger: TTTATGACATGCTGCTGAATGTTGACCAGTGTAGCACCCATTTAAATTACATGGATCCCATCTGTGACTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000479213.1
CDS TCA 72 bp TTCATCACAGGGAGAAAATCAGCTAGTGCATTTTTCTaGATACTTCCAGAAATGAATTGCAGGAGAACCCAC +
Preference number: 6 (lower is better)
Translates to: FITGRKSASAFF*ILPEMNCRRTH
Trigger: GTGGGTTCTCCTGCAATTCATTTCTGGAAGTATTCAGAAAAATGCACTAGCTGATTTTCTCCCTGTGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS GCA 72 bp CAATGTTCAAGGTCTGCTTATTTAAACCTAGCATATTaGAGACCATATCCCTGGAATAAGGCTGCTCCAATA +
Preference number: 6 (lower is better)
Translates to: QCSRSAYLNLAY*RPYPWNKAAPI
Trigger: TATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAATAAGCAGACCTTGAACATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
CDS CCA 72 bp GCTTATTTAAACCTAGCATATTGCAGACCATATCCCTaGAATAAGGCTGCTCCAATACATATCTCAACAAAG +
Preference number: 6 (lower is better)
Translates to: AYLNLAYCRPYP*NKAAPIHISTK
Trigger: CTTTGTTGAGATATGTATTGGAGCAGCCTTATTCCAGGGATATGGTCTGCAATATGCTAGGTTTAAATAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS CAA 72 bp ATACAGGTCATTGCAAAGGCATGGGTTGACTGGGGTTaGTTAATATCAGGAACTGGGATATATTCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: IQVIAKAWVDWG*LISGTGIYSFS
Trigger: AGAAAAAGAATATATCCCAGTTCCTGATATTAACAAACCCCAGTCAACCCATGCCTTTGCAATGACCTGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8
ENST00000539158.1
CDS TCA 72 bp AATTTCAATGCATTTATTGAGTTGCTGACCCCCTGCTaGTGTAGAAAACTCATATACCAGGAAATCTGCAAA +
Preference number: 6 (lower is better)
Translates to: NFNAFIELLTPC*CRKLIYQEICK
Trigger: TTTGCAGATTTCCTGGTATATGAGTTTTCTACATCAGCAGGGGGTCAGCAACTCAATAAATGCATTGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354577.8
ENST00000368053.8
ENST00000368058.5
ENST00000368060.7
ENST00000368068.8