Pregenerated sensors for MED21 (Homo sapiens)
Ensembl gene IDs: ENSG00000152944Ensembl transcript IDs: ENST00000282892.4, ENST00000536503.5, ENST00000536711.5, ENST00000544998.1, ENST00000546323.5
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGAACTGTGGAAAAGCTTGATTACAACAAAAATAACAGGCAGAGTGTTCTATTGCTGAAACTTAAACTCTaGATAGCAACAGATTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RTVEKLDYNKNNRQSVLLLKLKL*IATDCS Trigger: GCTGCAATCTGTTGCTATTCAGAGTTTAAGTTTCAG...CAATAGAACACTCTGCCTGTTATTTTTGTTGTAATCAAGCTTTTCCACAGTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| 3UTR TCA 72 bp | GTGGGAGGATCACCTGAACCCAGGGTGAAGCTGCAGTaGGCCATGATCACAGAACTGCACTTCAGCTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: VGGSPEPRVKLQ*AMITELHFSLG Trigger: ACCCAAGCTGAAGTGCAGTTCTGTGATCATGGCTCACTGCAGCTTCACCCTGGGTTCAGGTGATCCTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| 3UTR-3UTR CAA 90 bp | AGAACTGTGGAAAAGCTTGATTACAACAAAAATAACAGGCAGAGTGTTCTATTGGTCTTCTCCTTTGGCTaGAGAGATGTTTTGATTTGT | + |
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Preference number: 3 (lower is better) Translates to: RTVEKLDYNKNNRQSVLLVFSFG*RDVLIC Trigger: ACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGAC...CAATAGAACACTCTGCCTGTTATTTTTGTTGTAATCAAGCTTTTCCACAGTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGACGTCCTGAAGCTGCGTaGGCCGATCCGCCATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGRPEAA*ADPPCS Trigger: GGAACATGGCGGATCGGCTCACGCAGCTTCAGGACG...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR TCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGAGAATTCACAGCGTCCTaGAGCTGCGTGAGCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGEFTAS*SCVSRS Trigger: GGATCGGCTCACGCAGCTTCAGGACGCTGTGAATTC...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR TCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGAAGTGGGAGGATCACCTaGACCCAGGGTGAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGSGRIT*TQGEAA Trigger: TGCAGCTTCACCCTGGGTTCAGGTGATCCTCCCACT...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR TCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGAGCACTTCAGCTTGGGTaGCAGAGACTTCACCACTTC | + |
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Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGALQLG*QRLHHF Trigger: GAAGTGGTGAAGTCTCTGTCACCCAAGCTGAAGTGC...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR CCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGACTGAAGAGGCTGAAGTaGGAGGATCACCTGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGLKRLK*EDHLNP Trigger: TGGGTTCAGGTGATCCTCCCACTTCAGCCTCTTCAG...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR TCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGAAGCTGCAGTGAGCCATaGTCACAGAACTGCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGSCSEP*SQNCTS Trigger: TGAAGTGCAGTTCTGTGATCATGGCTCACTGCAGCT...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR GCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGAGGAGGACCACATTGCTaGAATACTCCAATGGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGGGPHC*NTPMAL Trigger: TAATGCCATTGGAGTATTGCAGCAATGTGGTCCTCC...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR GCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGATGTTCGTGCAATCAGTaGTGCAAAAAGCTGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGCSCNQ*CKKLGI Trigger: TATGCCCAGCTTTTTGCAGCACTGATTGCACGAACA...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR TCA 90 bp | ACATTATGCCTTCTTTATTCCTGCCATTCTAAGTTTCCTTCTGCTATAACTTCCCGTCCTGAAGCTGCGTaGGCCGATCCGCCATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLYSCHSKFPSAITSRPEAA*ADPPCS Trigger: GGAACATGGCGGATCGGCTCACGCAGCTTCAGGACG...GGAAGTTATAGCAGAAGGAAACTTAGAATGGCAGGAATAAAGAAGGCATAATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR GCA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGAATTACAAAACTGATCTaGAAGCGAATTCACAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGITKLI*KRIHSV Trigger: GACGCTGTGAATTCGCTTGCAGATCAGTTTTGTAAT...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR TCA 90 bp | CCTTATGTCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGAGTGGGAGGATCACCTaGACCCAGGGTGAAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PYVCSYCLLLWLERCFDLSGRIT*TQGEAA Trigger: TGCAGCTTCACCCTGGGTTCAGGTGATCCTCCCACT...CAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGACATAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | TCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGTAAAAGTGAATTCACAGCGTCCTaGAGCTGCGTGAGCCGATCC | + |
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Preference number: 4 (lower is better) Translates to: SVLTVFSFGLRDVLICKSEFTAS*SCVSRS Trigger: GGATCGGCTCACGCAGCTTCAGGACGCTGTGAATTC...ACTTTTACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR CCA 90 bp | CCTTATGTCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGCTGAAGAGGCTGAAGTaGGAGGATCACCTGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYVCSYCLLLWLERCFDLLKRLK*EDHLNP Trigger: TGGGTTCAGGTGATCCTCCCACTTCAGCCTCTTCAG...CAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGACATAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR GCA 90 bp | CCACCTCTAAGAGGCAGGACACTAGCCCAAACTAAAATGTCCCTTATGTCTGTTATTACAAAACTGATCTaGAAGCGAATTCACAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLRGRTLAQTKMSLMSVITKLI*KRIHSV Trigger: GACGCTGTGAATTCGCTTGCAGATCAGTTTTGTAAT...AACAGACATAAGGGACATTTTAGTTTGGGCTAGTGTCCTGCCTCTTAGAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | ACATTATGCCTTCTTTATTCCTGCCATTCTAAGTTTCCTTCTGCTATAACTTCCAGCTGCAGTGAGCCATaGTCACAGAACTGCACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLCLLYSCHSKFPSAITSSCSEP*SQNCTS Trigger: TGAAGTGCAGTTCTGTGATCATGGCTCACTGCAGCT...GGAAGTTATAGCAGAAGGAAACTTAGAATGGCAGGAATAAAGAAGGCATAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR GCA 90 bp | AGAACTGTGGAAAAGCTTGATTACAACAAAAATAACAGGCAGAGTGTTCTATTGGCAGGAGGACCACATTaGTGCAATACTCCAATGGCA | + |
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Preference number: 4 (lower is better) Translates to: RTVEKLDYNKNNRQSVLLAGGPH*CNTPMA Trigger: TGCCATTGGAGTATTGCAGCAATGTGGTCCTCCTGC...CAATAGAACACTCTGCCTGTTATTTTTGTTGTAATCAAGCTTTTCCACAGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | TCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGTAAAAGTGCACTTCAGCTTGGGTaGCAGAGACTTCACCTTAAA | + |
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Preference number: 4 (lower is better) Translates to: SVLTVFSFGLRDVLICKSALQLG*QRLHLK Trigger: TTTAAGGTGAAGTCTCTGTCACCCAAGCTGAAGTGC...ACTTTTACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR GCA 90 bp | TCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGTAAAAGTGGAGGACCACATTGCTaGAATACTCCAATGGCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLTVFSFGLRDVLICKSGGPHC*NTPMAL Trigger: TAATGCCATTGGAGTATTGCAGCAATGTGGTCCTCC...ACTTTTACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR GCA 90 bp | TCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGTAAAAGTTGTTCGTGCAATCAGTaGTGCAAAAAGCTGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SVLTVFSFGLRDVLICKSCSCNQ*CKKLGI Trigger: TATGCCCAGCTTTTTGCAGCACTGATTGCACGAACA...ACTTTTACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | ACATTATGCCTTCTTTATTCCTGCCATTCTAAGTTTCCTTCTGCTATAACTTCCATGGCATTACAAAACTaGTCTGCAAGCGAATTCACA | + |
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Preference number: 4 (lower is better) Translates to: TLCLLYSCHSKFPSAITSMALQN*SASEFT Trigger: TGTGAATTCGCTTGCAGATCAGTTTTGTAATGCCAT...GGAAGTTATAGCAGAAGGAAACTTAGAATGGCAGGAATAAAGAAGGCATAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | TCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGTAAAAGTGAACTAGAACAGGTATaGGGTTCTAGCAGAAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: SVLTVFSFGLRDVLICKSELEQV*GSSRRN Trigger: GTTTCTTCTGCTAGAACCTCATACCTGTTCTAGTTC...ACTTTTACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR CCA 90 bp | ACATTATGCCTTCTTTATTCCTGCCATTCTAAGTTTCCTTCTGCTATAACTTCCATTCCACCTTTCCAGTaGAGATTATCAGTAGACTCA | + |
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Preference number: 4 (lower is better) Translates to: TLCLLYSCHSKFPSAITSIPPFQ*RLSVDS Trigger: TGAGTCTACTGATAATCTCCACTGGAAAGGTGGAAT...GGAAGTTATAGCAGAAGGAAACTTAGAATGGCAGGAATAAAGAAGGCATAATGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | AGAACTGTGGAAAAGCTTGATTACAACAAAAATAACAGGCAGAGTGTTCTATTGATGATGCCAAGTAACTaGTGTAGTGGAAGTATGTTC | + |
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Preference number: 4 (lower is better) Translates to: RTVEKLDYNKNNRQSVLLMMPSN*CSGSMF Trigger: GAACATACTTCCACTACATCAGTTACTTGGCATCAT...CAATAGAACACTCTGCCTGTTATTTTTGTTGTAATCAAGCTTTTCCACAGTTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | ACATTATGCCTTCTTTATTCCTGCCATTCTAAGTTTCCTTCTGCTATAACTTCCTTGGCAATAATAAACTaGGGTGAAATGATGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: TLCLLYSCHSKFPSAITSLAIIN*GEMMPS Trigger: ACTTGGCATCATTTCACCTCAGTTTATTATTGCCAA...GGAAGTTATAGCAGAAGGAAACTTAGAATGGCAGGAATAAAGAAGGCATAATGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | ACATTATGCCTTCTTTATTCCTGCCATTCTAAGTTTCCTTCTGCTATAACTTCCGATCCAAGGGTTGGATaGATAACCATAGTTGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: TLCLLYSCHSKFPSAITSDPRVG*ITIVEN Trigger: ATTTTCAACTATGGTTATTCATCCAACCCTTGGATC...GGAAGTTATAGCAGAAGGAAACTTAGAATGGCAGGAATAAAGAAGGCATAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR TCA 90 bp | TCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGTAAAAGTCTGAAACTTAAACTCTaGATAGCAACAGATTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SVLTVFSFGLRDVLICKSLKLKL*IATDCS Trigger: GCTGCAATCTGTTGCTATTCAGAGTTTAAGTTTCAG...ACTTTTACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR GCA 90 bp | AGAACTGTGGAAAAGCTTGATTACAACAAAAATAACAGGCAGAGTGTTCTATTGTTACCCTATACATTATaGCTTCTTTATTCCTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RTVEKLDYNKNNRQSVLLLPYTL*LLYSCH Trigger: ATGGCAGGAATAAAGAAGGCATAATGTATAGGGTAA...CAATAGAACACTCTGCCTGTTATTTTTGTTGTAATCAAGCTTTTCCACAGTTCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS CCA 90 bp | TTCAAGCACCGCCCGGCAGCCGGCCTCAAACCTCCGAGTTCGCGGTaGCGCCTCCCGAGAGAGCGCTTTATGCCGAAGCCCTGTCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: FKHRPAAGLKPPSSR*RLPRERFMPKPCLS Trigger: TGAGAGACAGGGCTTCGGCATAAAGCGCTCTCTCGGGAGGCGCCACCGCGAACTCGGAGGTTTGAGGCCGGCTGCCGGGCGGTGCTTGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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| CDS GCA 90 bp | AGCCGGACAAGAACGATCTTCCCGGTCTCCTCAAGCGAAAGAGTCTaGTCCCTCCCGCACCTTCAAGCACCGCCCGGCAGCCGGCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: SRTRTIFPVSSSERV*SLPHLQAPPGSRPQ Trigger: TTGAGGCCGGCTGCCGGGCGGTGCTTGAAGGTGCGGGAGGGAGCAGACTCTTTCGCTTGAGGAGACCGGGAAGATCGTTCTTGTCCGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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| CDS GCA 90 bp | TCAAACCTCCGAGTTCGCGGTGGCGCCTCCCGAGAGAGCGCTTTATaGCGAAGCCCTGTCTCTCAGTCCGCTCCCCACTTTCAAGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: SNLRVRGGASRESAL*RSPVSQSAPHFQVL Trigger: CAAAACTTGAAAGTGGGGAGCGGACTGAGAGACAGGGCTTCGGCATAAAGCGCTCTCTCGGGAGGCGCCACCGCGAACTCGGAGGTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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| CDS TCA 90 bp | GCAAAAAGCTGGGCATACTCGAATTCACAGCGTCCTGAAGCTGCGTaGGCCGATCCGCCATGTTCCTACCGCAGCAAACAGACGCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: AKSWAYSNSQRPEAA*ADPPCSYRSKQTPK Trigger: TTTTGGCGTCTGTTTGCTGCGGTAGGAACATGGCGGATCGGCTCACGCAGCTTCAGGACGCTGTGAATTCGAGTATGCCCAGCTTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536503.5 |
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| CDS CCA 90 bp | GATGTTCTGCTGGCAATGATCCTGCGGGAGAAACAGCTGTGCTGCTaGTGTCTGCTGCCTCTGGATGCTAACTCTCAGGCCTCTGAACTT | + |
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Preference number: 5 (lower is better) Translates to: DVLLAMILREKQLCC*CLLPLDANSQASEL Trigger: AAGTTCAGAGGCCTGAGAGTTAGCATCCAGAGGCAGCAGACACCAGCAGCACAGCTGTTTCTCCCGCAGGATCATTGCCAGCAGAACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544998.1 |
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| CDS-3UTR CAA 90 bp | AGTGGTGCCCCTAGAACTGTAGTCCCAGTTACTGAAGAGGCTGAAGTGGGAGGAGGCAGGAGGACCACATaGCTGCAATACTCCAATGGC | + |
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Preference number: 5 (lower is better) Translates to: SGAPRTVVPVTEEAEVGGGRRTT*LQYSNG Trigger: GCCATTGGAGTATTGCAGCAATGTGGTCCTCCTGCC...TCCTCCCACTTCAGCCTCTTCAGTAACTGGGACTACAGTTCTAGGGGCACCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000546323.5 |
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| CDS-3UTR CAA 90 bp | AGAACTGTGGAAAAGCTTGATTACAACAAAAATAACAGGCAGAGTGTTCTATTGGGCAGGAGGACCACATaGCTGCAATACTCCAATGGC | + |
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Preference number: 5 (lower is better) Translates to: RTVEKLDYNKNNRQSVLLGRRTT*LQYSNG Trigger: GCCATTGGAGTATTGCAGCAATGTGGTCCTCCTGCC...CAATAGAACACTCTGCCTGTTATTTTTGTTGTAATCAAGCTTTTCCACAGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR CAA 90 bp | TCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGTAAAAGTCTTGAGGTTAGCAGTTaGGCATTAGCCTGGGCAACA | + |
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Preference number: 5 (lower is better) Translates to: SVLTVFSFGLRDVLICKSLEVSS*ALAWAT Trigger: TGTTGCCCAGGCTAATGCCAAACTGCTAACCTCAAG...ACTTTTACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR CAA 90 bp | ACATTATGCCTTCTTTATTCCTGCCATTCTAAGTTTCCTTCTGCTATAACTTCCGTCTTCTCCTTTGGCTaGAGAGATGTTTTGATTTGT | + |
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Preference number: 5 (lower is better) Translates to: TLCLLYSCHSKFPSAITSVFSFG*RDVLIC Trigger: ACAAATCAAAACATCTCTCAAGCCAAAGGAGAAGAC...GGAAGTTATAGCAGAAGGAAACTTAGAATGGCAGGAATAAAGAAGGCATAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR CAA 90 bp | AGAACTGTGGAAAAGCTTGATTACAACAAAAATAACAGGCAGAGTGTTCTATTGAGGCAGAGTGTTCTATaGTTCCTGTTTTCTCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: RTVEKLDYNKNNRQSVLLRQSVL*FLFSPE Trigger: TTCAGGAGAAAACAGGAACAATAGAACACTCTGCCT...CAATAGAACACTCTGCCTGTTATTTTTGTTGTAATCAAGCTTTTCCACAGTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS-3UTR CAA 90 bp | CCTTATGTCTGTTCTTACTGTCTTCTCCTTTGGCTTGAGAGATGTTTTGATTTGCTTGACCTTTTCTCTTaGTACCTTTTTGACTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: PYVCSYCLLLWLERCFDLLDLFS*YLFDSF Trigger: AAAGGAGTCAAAAAGGTACAAAGAGAAAAGGTCAAG...CAAATCAAAACATCTCTCAAGCCAAAGGAGAAGACAGTAAGAACAGACATAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000282892.4 |
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| CDS CCA 72 bp | CGCCCGGCAGCCGGCCTCAAACCTCCGAGTTCGCGGTaGCGCCTCCCGAGAGAGCGCTTTATGCCGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: RPAAGLKPPSSR*RLPRERFMPKP Trigger: GGGCTTCGGCATAAAGCGCTCTCTCGGGAGGCGCCACCGCGAACTCGGAGGTTTGAGGCCGGCTGCCGGGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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| CDS GCA 72 bp | CGAGTTCGCGGTGGCGCCTCCCGAGAGAGCGCTTTATaGCGAAGCCCTGTCTCTCAGTCCGCTCCCCACTTT | + |
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Preference number: 6 (lower is better) Translates to: RVRGGASRESAL*RSPVSQSAPHF Trigger: AAAGTGGGGAGCGGACTGAGAGACAGGGCTTCGGCATAAAGCGCTCTCTCGGGAGGCGCCACCGCGAACTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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| CDS GCA 72 bp | AGAACGATCTTCCCGGTCTCCTCAAGCGAAAGAGTCTaGTCCCTCCCGCACCTTCAAGCACCGCCCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RTIFPVSSSERV*SLPHLQAPPGS Trigger: GCTGCCGGGCGGTGCTTGAAGGTGCGGGAGGGAGCAGACTCTTTCGCTTGAGGAGACCGGGAAGATCGTTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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| CDS CCA 72 bp | CTGGCAATGATCCTGCGGGAGAAACAGCTGTGCTGCTaGTGTCTGCTGCCTCTGGATGCTAACTCTCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LAMILREKQLCC*CLLPLDANSQA Trigger: GGCCTGAGAGTTAGCATCCAGAGGCAGCAGACACCAGCAGCACAGCTGTTTCTCCCGCAGGATCATTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000544998.1 |
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| CDS TCA 72 bp | GATCTGCAAGCGAATTCACAGCGTCCTGAAGCTGCGTaGGCCGATCCGCCATGTTCCTACCGCAGCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: DLQANSQRPEAA*ADPPCSYRSKQ Trigger: CTGTTTGCTGCGGTAGGAACATGGCGGATCGGCTCACGCAGCTTCAGGACGCTGTGAATTCGCTTGCAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000282892.4 ENST00000546323.5 |
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| CDS TCA 72 bp | TGGGCATACTCGAATTCACAGCGTCCTGAAGCTGCGTaGGCCGATCCGCCATGTTCCTACCGCAGCAAACAG | + |
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Preference number: 6 (lower is better) Translates to: WAYSNSQRPEAA*ADPPCSYRSKQ Trigger: CTGTTTGCTGCGGTAGGAACATGGCGGATCGGCTCACGCAGCTTCAGGACGCTGTGAATTCGAGTATGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536503.5 |
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| CDS TCA 72 bp | TGCAAAAAGCTGGGCATACTCGAATTCACAGCGTCCTaGAGCTGCGTGAGCCGATCCGCCATGTTCCTACCG | + |
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Preference number: 6 (lower is better) Translates to: CKKLGILEFTAS*SCVSRSAMFLP Trigger: CGGTAGGAACATGGCGGATCGGCTCACGCAGCTTCAGGACGCTGTGAATTCGAGTATGCCCAGCTTTTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536503.5 |
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| CDS CAA 72 bp | AGCCCTGTCTCTCAGTCCGCTCCCCACTTTCAAGTTTaGCCTCTTGGGCCCCTTTCCTCCCTTGCTTTACCT | + |
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Preference number: 6 (lower is better) Translates to: SPVSQSAPHFQV*PLGPLSSLALP Trigger: AGGTAAAGCAAGGGAGGAAAGGGGCCCAAGAGGCAAAACTTGAAAGTGGGGAGCGGACTGAGAGACAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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| CDS TCA 72 bp | AATCGAATGAAATTCCTCACCGAATTCACAGCGTCCTaGAGCTGCGTGAGCCGATCCGCCATGTTCCTACCG | + |
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Preference number: 6 (lower is better) Translates to: NRMKFLTEFTAS*SCVSRSAMFLP Trigger: CGGTAGGAACATGGCGGATCGGCTCACGCAGCTTCAGGACGCTGTGAATTCGGTGAGGAATTTCATTCGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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| CDS CAA 90 bp | TTATGCCGAAGCCCTGTCTCTCAGTCCGCTCCCCACTTTCAAGTTTaGCCTCTTGGGCCCCTTTCCTCCCTTGCTTTACCTCAAGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LCRSPVSQSAPHFQV*PLGPLSSLALPQER Trigger: TCTTTCTTGAGGTAAAGCAAGGGAGGAAAGGGGCCCAAGAGGCAAAACTTGAAAGTGGGGAGCGGACTGAGAGACAGGGCTTCGGCATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536711.5 |
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