RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED17 (Homo sapiens)

Ensembl gene IDs: ENSG00000042429

Ensembl transcript IDs: ENST00000251871.9, ENST00000507258.4, ENST00000525026.6, ENST00000525613.2, ENST00000528786.2, ENST00000530819.1, ENST00000531920.6, ENST00000533133.6, ENST00000533359.5, ENST00000638270.1, ENST00000638294.1, ENST00000638487.1, ENST00000638518.1, ENST00000638790.1, ENST00000639189.1, ENST00000639457.1, ENST00000639523.1, ENST00000639596.1, ENST00000639724.1, ENST00000640027.1, ENST00000640077.1, ENST00000640411.1, ENST00000640451.1, ENST00000640473.1, ENST00000640521.1, ENST00000640583.1, ENST00000640804.1

Found 1004 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGCTGGGTTCAGGTAATGGGAGACAGCAGGATGGCAGGGAAGAGTaGGGTCAGGGTATTTATTCCCCTGGCACCCTCCCTGTGAGGTTG +
Preference number: 1 (lower is better)
Translates to: GLGSGNGRQQDGREE*GQGIYSPGTLPVRL
Trigger: CAACCTCACAGGGAGGGTGCCAGGGGAATAAATACCCTGACCTCACTCTTCCCTGCCATCCTGCTGTCTCCCATTACCTGAACCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CCA 90 bp GGCACCCTCCCTGTGAGGTTGTCTAGGCTGGTTGTATCTCTTGACTaGCTGCTAGGCTTCTCAAGATGGACTGTTCTACACGACTCTCCC +
Preference number: 1 (lower is better)
Translates to: GTLPVRLSRLVVSLD*LLGFSRWTVLHDSP
Trigger: GGGAGAGTCGTGTAGAACAGTCCATCTTGAGAAGCCTAGCAGCCAGTCAAGAGATACAACCAGCCTAGACAACCTCACAGGGAGGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR TCA 90 bp ATGCATTTTGTCACCAGTGCTGAAGGCAGTAGTGCTGGGACAGCATaGGTGCCATTCCTCTGGCCATGGTTCTCATACCTAGCTTTGATC +
Preference number: 1 (lower is better)
Translates to: MHFVTSAEGSSAGTA*VPFLWPWFSYLALI
Trigger: GATCAAAGCTAGGTATGAGAACCATGGCCAGAGGAATGGCACTCATGCTGTCCCAGCACTACTGCCTTCAGCACTGGTGACAAAATGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR TCA 90 bp GGAGGGAATAGGACTCCACCTTCCACTGCCAAAGCTAAAGTTGCCTaGTACTTGCTTCTCCTGCCCACTGGCAGCTTAAGCAAAGACATA +
Preference number: 1 (lower is better)
Translates to: GGNRTPPSTAKAKVA*YLLLLPTGSLSKDI
Trigger: TATGTCTTTGCTTAAGCTGCCAGTGGGCAGGAGAAGCAAGTATCAGGCAACTTTAGCTTTGGCAGTGGAAGGTGGAGTCCTATTCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CCA 90 bp ACACGTGGTTACATTAATACCTTCTTACATCCTCTGGCTTTGGGCTaGGTTCAGGTAATGGGAGACAGCAGGATGGCAGGGAAGAGTGAG +
Preference number: 1 (lower is better)
Translates to: TRGYINTFLHPLALG*VQVMGDSRMAGKSE
Trigger: CTCACTCTTCCCTGCCATCCTGCTGTCTCCCATTACCTGAACCCAGCCCAAAGCCAGAGGATGTAAGAAGGTATTAATGTAACCACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR TCA 90 bp GAGAACACACATCTCTGTCAGGGCACTTCTCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGAAGGCTGAAATTTTACCACTCCTTG +
Preference number: 1 (lower is better)
Translates to: ENTHLCQGTSQIVPH*VPRPKGRLKFYHSL
Trigger: CAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTGAGAAGTGCCCTGACAGAGATGTGTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR TCA 90 bp ATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGT +
Preference number: 1 (lower is better)
Translates to: MADALPMLSIGPSPT*LLKLSTCQPITLAS
Trigger: ACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR GCA 90 bp TCCCACTCTACTCAGATGGGGTTTAAAAGAACAGACGGTAGTATCTaGACATGTATTCTCAGCCATTCTACTCAAGGTGTGGTCCTGGTC +
Preference number: 1 (lower is better)
Translates to: SHSTQMGFKRTDGSI*TCILSHSTQGVVLV
Trigger: GACCAGGACCACACCTTGAGTAGAATGGCTGAGAATACATGTGCAGATACTACCGTCTGTTCTTTTAAACCCCATCTGAGTAGAGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR GCA 90 bp AAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCATCATGATGGAACTCAAGGTCTGTTT +
Preference number: 1 (lower is better)
Translates to: KSLRTRKSHSLVAKR*TCWMRHHDGTQGLF
Trigger: AAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR CCA 90 bp AGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGAACTCAAGGTCTGTTTATGAAACTC +
Preference number: 1 (lower is better)
Translates to: RTRKSHSLVAKRCTC*MRHHDGTQGLFMKL
Trigger: GAGTTTCATAAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639523.1
3UTR TCA 90 bp CTGACAGTCAGCAGAGATATCTGCAGTGACTTAACATCACGACCATaGAGTAAACTTTTGTTGGGGTGCTCACTGACTACTACAGCAACC +
Preference number: 1 (lower is better)
Translates to: LTVSRDICSDLTSRP*SKLLLGCSLTTTAT
Trigger: GGTTGCTGTAGTAGTCAGTGAGCACCCCAACAAAAGTTTACTTCATGGTCGTGATGTTAAGTCACTGCAGATATCTCTGCTGACTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR GCA 90 bp TTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTaGTGGATGAGGCATCATGATGGAACTCAAGGTCTGTTTATGAAA +
Preference number: 1 (lower is better)
Translates to: LRTRKSHSLVAKRCT*WMRHHDGTQGLFMK
Trigger: TTTCATAAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR CCA 90 bp AGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGAACTCAAGGTCTGTTTATGAAACTA +
Preference number: 1 (lower is better)
Translates to: RTRKSHSLVAKRCTC*MRHHDGTQGLFMKL
Trigger: TAGTTTCATAAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640077.1
3UTR CCA 90 bp GGTTACCTGGTTACTACTACTAGCAGCAGGTTACCACACTATCCCTaGTGGCTCACCTACACCCACTTCTTTGTAAATAGATCTTTAGAT +
Preference number: 1 (lower is better)
Translates to: GYLVTTTSSRLPHYP*WLTYTHFFVNRSLD
Trigger: ATCTAAAGATCTATTTACAAAGAAGTGGGTGTAGGTGAGCCACCAGGGATAGTGTGGTAACCTGCTGCTAGTAGTAGTAACCAGGTAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR TCA 90 bp GGGCTGAGAGATAATCTGGTTTTTCACCACAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTCCCGAGAGAGCTGTGCAAAAATTTC +
Preference number: 1 (lower is better)
Translates to: GLRDNLVFHHNVRDL*FNLNSFPRELCKNF
Trigger: GAAATTTTTGCACAGCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGTCCCTCACATTGTGGTGAAAAACCAGATTATCTCTCAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
3UTR CCA 90 bp TTCCCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTaGCTACTCACTACAGCGACGTACCAAACAGGGAAAGTAAGACAT +
Preference number: 1 (lower is better)
Translates to: FPHICFSFYNSLGRY*LLTTATYQTGKVRH
Trigger: ATGTCTTACTTTCCCTGTTTGGTACGTCGCTGTAGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR TCA 90 bp TCTTTAGATCCTCCTGAGTCTGCCACCTATTTCTTGTTAAGACTCTaGCTGATACAATGGGGGCAATTTAGAATGCATTTTGTCACCAGT +
Preference number: 1 (lower is better)
Translates to: SLDPPESATYFLLRL*LIQWGQFRMHFVTS
Trigger: ACTGGTGACAAAATGCATTCTAAATTGCCCCCATTGTATCAGTCAGAGTCTTAACAAGAAATAGGTGGCAGACTCAGGAGGATCTAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR TCA 90 bp AAAACATCACTTTTTGGAAGGTCTTTACATTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCACTTTCAGGTCCATTACGAACTGAG +
Preference number: 1 (lower is better)
Translates to: KTSLFGRSLHWLRGN*TIILLPLSGPLRTE
Trigger: CTCAGTTCGTAATGGACCTGAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCAAAAAGTGATGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639596.1
3UTR TCA 90 bp AAAACATCACTTTTTGGAAGGTCTTTACATTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCACTTTCAGGTCCATTACGAACTGAA +
Preference number: 1 (lower is better)
Translates to: KTSLFGRSLHWLRGN*TIILLPLSGPLRTE
Trigger: TTCAGTTCGTAATGGACCTGAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCAAAAAGTGATGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR TCA 90 bp CCAATTACAATTCCTGATCAACATGAGATAATCAGGTTATCCCTTTaGTTTGATGGTGTTCCAGCAAAGAAATCTGATGAAAAACACTCA +
Preference number: 1 (lower is better)
Translates to: PITIPDQHEIIRLSL*FDGVPAKKSDEKHS
Trigger: TGAGTGTTTTTCATCAGATTTCTTTGCTGGAACACCATCAAATCAAAGGGATAACCTGATTATCTCATGTTGATCAGGAATTGTAATTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR GCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGCTGGGAGGTAGACGTTaGGGTGAGCCGAGACTGCGC +
Preference number: 2 (lower is better)
Translates to: HMITEAQYLPAHNLGELLLGGRR*GEPRLR
Trigger: GCGCAGTCTCGGCTCACCGCAACGTCTACCTCCCAG...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
3UTR-3UTR GCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATCTGGGAGGTAGACGTTaGGGTGAGCCGAGACTGCGC +
Preference number: 2 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHLGGRR*GEPRLR
Trigger: GCGCAGTCTCGGCTCACCGCAACGTCTACCTCCCAG...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
3UTR-3UTR TCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATAGGTGTCTCAACTGGTaGGGTCAATCAAGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHRCLNW*GQSSGR
Trigger: TCTCCCACTTGATTGACCTCACCAGTTGAGACACCT...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR TCA 90 bp GGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTCCAATGTGGGGAACCTaGGGTTGGGTGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: GSSIRLAKLSMVAAALLLPMWGT*GWVFET
Trigger: GGTCTCGAACACCCAACCTCAGGTTCCCCACATTGG...AAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638487.1
3UTR-3UTR CCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 2 (lower is better)
Translates to: HMITEAQYLPAHNLGELLSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CCA 90 bp GGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 2 (lower is better)
Translates to: GSSIRLAKLSMVAAALLLSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...AAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATAGGTCAAGACTGCAGTaGACCATGATCACACCACTG +
Preference number: 2 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNRSRLQ*TMITPL
Trigger: CAGTGGTGTGATCATGGTTCACTGCAGTCTTGACCT...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR TCA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: HRDGRCITNALYRSKSHMLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 2 (lower is better)
Translates to: GGHRDGRCITNALYRSKSQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR CCA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTAGTTCAAGACCAGCCTaGCCAAGATGGCAAAACCCT +
Preference number: 2 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTSSRPA*PRWQNP
Trigger: AGGGTTTTGCCATCTTGGCCAGGCTGGTCTTGAACT...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR CCA 90 bp CCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 2 (lower is better)
Translates to: PQFGLLSCQWLQQLYSLESIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...TTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR CCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 2 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR CAA 90 bp GTCTGCCAATGTGGGGAACCTGGTTTGGATTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGT +
Preference number: 2 (lower is better)
Translates to: VCQCGEPGLDLGKGR*KRLTVPRSPISGAC
Trigger: ACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
3UTR-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: GAVTSETEENPVAPAPDKLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR GCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCTCAGGCAACCCTCCTaGCTCGGCCTCCCTAATAGC +
Preference number: 2 (lower is better)
Translates to: TNALYRSKSHMITEAQYLLRQPS*LGLPNS
Trigger: GCTATTAGGGAGGCCGAGGCAGGAGGGTTGCCTGAG...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR CCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATTGGAAAGGCCTTAATTaGAGAAAGCAATCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHWKGLN*RKQSRA
Trigger: AGCCCTGGATTGCTTTCTCCAATTAAGGCCTTTCCA...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR CAA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCATGTACCTG +
Preference number: 2 (lower is better)
Translates to: ALYRSKSHMITEAQY*PAHNLGELLNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp TTGACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: LTNEPVSEDPQFGLLSCQLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...TTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR GCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 2 (lower is better)
Translates to: EATVMADALPMLSIGPSPHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAAAGTTGTTCTATCGTaGCCCACAAGCTCCATTTTT +
Preference number: 2 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLKVVLS*PTSSIF
Trigger: AAAAATGGAGCTTGTGGGCCACGATAGAACAACTTT...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAATTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: GRCITNALYRSKSHMITELGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCTTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: GLLSCQWLQQLYSLEKYALGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...AGCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp TGCACTTGCTGGATGAGGCATCATGATGGAACTCAAGGTCTGTTTATGAAACTCTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: CTCWMRHHDGTQGLFMKLLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...GAGTTTCATAAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639523.1
3UTR-3UTR TCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGTCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 2 (lower is better)
Translates to: HRDGRCITNALYRSKSHMSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTTCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 2 (lower is better)
Translates to: GSSIRLAKLSMVAAALLLSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...AAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR GCA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTACAGACGGTAGTATCTaGACATGTATTCTCAGCCAT +
Preference number: 2 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTTDGSI*TCILSH
Trigger: ATGGCTGAGAATACATGTGCAGATACTACCGTCTGT...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR GCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCCTGGGAGGTAGACGTTaGGGTGAGCCGAGACTGCGC +
Preference number: 2 (lower is better)
Translates to: TRAKCRHKQLHFINKISTLGGRR*GEPRLR
Trigger: GCGCAGTCTCGGCTCACCGCAACGTCTACCTCCCAG...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000638790.1
3UTR-3UTR CCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCAGTTCGAAACCAGCCTaGGCAACATGGAAAAACCCT +
Preference number: 2 (lower is better)
Translates to: ALYRSKSHMITEAQYLPASSKPA*ATWKNP
Trigger: AGGGTTTTTCCATGTTGCCCAGGCTGGTTTCGAACT...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTCTGCTGGGTGGAGGCTaGAGAATCCCAGGTGGAAGG +
Preference number: 2 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTLLGGG*RIPGGR
Trigger: CCTTCCACCTGGGATTCTCCAGCCTCCACCCAGCAG...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR CCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATCCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 2 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATGAGAGCTTGCCTATATaGTACTACTTTCAGTGTTAC +
Preference number: 2 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNESLPI*YYFQCY
Trigger: GTAACACTGAAAGTAGTATCATATAGGCAAGCTCTC...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR TCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: ITNALYRSKSHMITEAQYLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: HRDGRCITNALYRSKSHMWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 2 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCTAGGTGTCTCAACTGGTaGGGTCAATCAAGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: GLLSCQWLQQLYSLEKYARCLNW*GQSSGR
Trigger: TCTCCCACTTGATTGACCTCACCAGTTGAGACACCT...AGCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638487.1
3UTR-3UTR TCA 90 bp GGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 2 (lower is better)
Translates to: GKGRLKRLTVPRSPISGAAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...GGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
3UTR-3UTR TCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 2 (lower is better)
Translates to: ALYRSKSHMITEAQYLPATCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
3UTR-3UTR TCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: EATVMADALPMLSIGPSPNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
3UTR-3UTR TCA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATAGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 2 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLIGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR GCA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTACTTTTTCCAAGAAGTaGAAACCTGTTCCTTGGAAA +
Preference number: 2 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTTFSKK*KPVPWK
Trigger: TTTCCAAGGAACAGGTTTGCACTTCTTGGAAAAAGT...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR GCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATCTTATAAGGAGAGCTTaGCTATATGATACTACTTTC +
Preference number: 2 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHLIRRA*LYDTTF
Trigger: GAAAGTAGTATCATATAGGCAAGCTCTCCTTATAAG...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR GCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGAG +
Preference number: 2 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHASNFV*QCGEPE
Trigger: CTCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
3UTR-3UTR TCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTGGCATGAGAGTCATTTaGACCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTGMRVI*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAATGACTCTCATGCC...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR TCA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCATCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 2 (lower is better)
Translates to: NALYRSKSHMITEAQYLPSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp ACCTTGATATATGCAGACCCCTCTAAATCACTAGGAATTTGGACATCAAGAGGAGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 2 (lower is better)
Translates to: TLIYADPSKSLGIWTSRGGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...TCCTCTTGATGTCCAAATTCCTAGTGATTTAGAGGGGTCTGCATATATCAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR TCA 90 bp GCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATAGCCCAATGTGGGGAACCTaGGGTTGGGTGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: AQLQYSIAVEWTCIFVHSPMWGT*GWVFET
Trigger: GGTCTCGAACACCCAACCTCAGGTTCCCCACATTGG...GCTATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000638790.1
3UTR-3UTR TCA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATAATTGAACTCCCAACCTaGAGTGATACTCTCGCTTCA +
Preference number: 2 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLIIELPT*SDTLAS
Trigger: TGAAGCGAGAGTATCACTTCAGGTTGGGAGTTCAAT...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR GCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGTTCAGCCTCCCAAAGTaGTGGGATTATAGGCGCAAA +
Preference number: 2 (lower is better)
Translates to: TNALYRSKSHMITEAQYLFSLPK*WDYRRK
Trigger: TTTGCGCCTATAATCCCAGCACTTTGGGAGGCTGAA...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR CCA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 2 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTAGGTGTCTCAACTGGTaGGGTCAATCAAGTGGGAGA +
Preference number: 2 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTRCLNW*GQSSGR
Trigger: TCTCCCACTTGATTGACCTCACCAGTTGAGACACCT...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR TCA 90 bp TTGGGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGATTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LGKGRLKRLTVPRSPISGLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...TCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
3UTR-3UTR TCA 90 bp AGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGTATTGAAACCTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: RLTVPRSPISGACFCIETWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...GGTTTCAATACAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR TCA 90 bp TTAGTCAGTCTTTCTGCCCCCTTCAATAAGATTTGTGCTGCTCCAGCAAGTGACAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 2 (lower is better)
Translates to: LVSLSAPFNKICAAPASDNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...GTCACTTGCTGGAGCAGCACAAATCTTATTGAAGGGGGCAGAAAGACTGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR TCA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATATCTGCAACTGTTACCTaGGACAGAAGAAAATCCTGT +
Preference number: 2 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLISATVT*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGGTAACAGTTGCAGA...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR GCA 90 bp GAGGAAAGAGAGATCCTGCACTTCTGTAGCTCAGATCTCCGAGAATTTTATCTCCGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 2 (lower is better)
Translates to: EEREILHFCSSDLREFYLRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...GAGATAAAATTCTCGGAGATCTGAGCTACAGAAGTGCAGGATCTCTCTTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
3UTR-3UTR GCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 2 (lower is better)
Translates to: TNALYRSKSHMITEAQYLHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CCA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTATTTTGTCTGCCAATGTaGGGAACCTGGTTTGGATTT +
Preference number: 2 (lower is better)
Translates to: AELHVPGAVTSETEENPVFCLPM*GTWFGF
Trigger: AAATCCAAACCAGGTTCCCCACATTGGCAGACAAAA...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR CCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 2 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
3UTR CAA 90 bp CAAAAATTTCTTTACATAAGAGAACATTCTGTGCCGCTTCTAATTTaGTCTGCCAATGTGGGGAACCTGAGGTTGGGTGTTCGAGACCAG +
Preference number: 2 (lower is better)
Translates to: QKFLYIREHSVPLLI*SANVGNLRLGVRDQ
Trigger: CTGGTCTCGAACACCCAACCTCAGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATGTAAAGAAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
3UTR-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 2 (lower is better)
Translates to: GRCITNALYRSKSHMITENGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGTTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 2 (lower is better)
Translates to: GAVTSETEENPVAPAPDKFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 2 (lower is better)
Translates to: GAVTSETEENPVAPAPDKNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGATATTCAATTGCAGTTaGATGGACCTCTCTAATCAG +
Preference number: 2 (lower is better)
Translates to: GAVTSETEENPVAPAPDKIFNCS*MDLSNQ
Trigger: CTGATTAGAGAGGTCCATTCAACTGCAATTGAATAT...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639457.1
3UTR-3UTR GCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCCTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 2 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR GCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGAG +
Preference number: 2 (lower is better)
Translates to: ITNALYRSKSHMITEAQYASNFV*QCGEPE
Trigger: CTCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
3UTR-3UTR CCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCAGTTCGAAACCAGCCTaGGCAACATGGAAAAACCCT +
Preference number: 2 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSSSKPA*ATWKNP
Trigger: AGGGTTTTTCCATGTTGCCCAGGCTGGTTTCGAACT...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGCTTAAAGGAGACAACTaGAGGAAGAGGTTATCAATA +
Preference number: 2 (lower is better)
Translates to: GAVTSETEENPVAPAPDKLKGDN*RKRLSI
Trigger: TATTGATAACCTCTTCCTCCAGTTGTCTCCTTTAAG...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCCAGCCTGGCCAAGATaGCAAAACCCTCTTATCAAA +
Preference number: 2 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSPAWPR*QNPLIK
Trigger: TTTGATAAGAGGGTTTTGCCATCTTGGCCAGGCTGG...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR TCA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACAGGTCAAGACTGCAGTaGACCATGATCACACCACTG +
Preference number: 2 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNRSRLQ*TMITPL
Trigger: CAGTGGTGTGATCATGGTTCACTGCAGTCTTGACCT...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR TCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 2 (lower is better)
Translates to: ITNALYRSKSHMITEAQYNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp CAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 2 (lower is better)
Translates to: QLESAQLQYSIAVEWTCISTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...TATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 2 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR TCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 2 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR GCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAACATCACTTTCTATACTaGCCCTTGGACTTGAGATTA +
Preference number: 2 (lower is better)
Translates to: GRCITNALYRSKSHMITEHHFLY*PLDLRL
Trigger: TAATCTCAAGTCCAAGGGGCAGTATAGAAAGTGATG...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR CCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCTGGAAAGGCCTTAATTaGAGAAAGCAATCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSWKGLN*RKQSRA
Trigger: AGCCCTGGATTGCTTTCTCCAATTAAGGCCTTTCCA...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCAACCAGGTTTTGGGGTaGGGCAAGGGAGGCTGTAAT +
Preference number: 2 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFNQVLG*GKGGCN
Trigger: ATTACAGCCTCCCTTGCCCCACCCCAAAACCTGGTT...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640077.1
3UTR-3UTR TCA 90 bp TTGATATATGCAGACCCCTCTAAATCACTAGGAATTTGGACATCAAGAGGACAGATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 2 (lower is better)
Translates to: LIYADPSKSLGIWTSRGQINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...CTGTCCTCTTGATGTCCAAATTCCTAGTGATTTAGAGGGGTCTGCATATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR GCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 2 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAATCAATTGCAGTTGAATaGACCTCTCTAATCAGTAGA +
Preference number: 2 (lower is better)
Translates to: GRCITNALYRSKSHMITESIAVE*TSLISR
Trigger: TCTACTGATTAGAGAGGTCCATTCAACTGCAATTGA...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639457.1
3UTR-3UTR TCA 90 bp GGACATCAAGAGGACAGTAATCTTCAGGTATCTTTTTATCCAGATCGAGATCTGGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 2 (lower is better)
Translates to: GHQEDSNLQVSFYPDRDLAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...CAGATCTCGATCTGGATAAAAAGATACCTGAAGATTACTGTCCTCTTGATGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
3UTR-3UTR TCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 2 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
3UTR-3UTR GCA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 2 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR GCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 2 (lower is better)
Translates to: AKCRHKQLHFINKISTFHHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR GCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGCCATGGATAGAAAGATaGAAGATCTTGATCAGAAGG +
Preference number: 2 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWPWIER*KILIRR
Trigger: CCTTCTGATCAAGATCTTGCATCTTTCTATCCATGG...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR GCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 2 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
3UTR CAA 90 bp CTCTATCTTCATTTATATATAAGGAAACAAGTTCACAGAGAATCCTaGCCAAGTTCATACAGCAAGCCAGTAGCAGAGCCAAGATTCAAA +
Preference number: 2 (lower is better)
Translates to: LYLHLYIRKQVHRES*PSSYSKPVAEPRFK
Trigger: TTTGAATCTTGGCTCTGCTACTGGCTTGCTGTATGAACTTGGCAAGGATTCTCTGTGAACTTGTTTCCTTATATATAAATGAAGATAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR TCA 90 bp AATTTGGACATCAAGAGGACAGTAATCTTCAGGTATCTTTTTATCCAGATCGAGTTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: NLDIKRTVIFRYLFIQIELVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...CTCGATCTGGATAAAAAGATACCTGAAGATTACTGTCCTCTTGATGTCCAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
3UTR-3UTR TCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 2 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
3UTR-3UTR TCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 2 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATCTTAAAGGAGACAACTaGAGGAAGAGGTTATCAATA +
Preference number: 2 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNLKGDN*RKRLSI
Trigger: TATTGATAACCTCTTCCTCCAGTTGTCTCCTTTAAG...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAAAACAATCCAACCTTaGAGAAAAATGCTAGCAACT +
Preference number: 2 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCKTIQP*RKMLAT
Trigger: AGTTGCTAGCATTTTTCTCCAAGGTTGGATTGTTTT...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640077.1
3UTR-3UTR CAA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGCAACTGAACCAGGTTTaGGGGTGGGGCAAGGGAGGC +
Preference number: 3 (lower is better)
Translates to: HMITEAQYLPAHNLGELLQLNQV*GWGKGG
Trigger: GCCTCCCTTGCCCCACCCCAAAACCTGGTTCAGTTG...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640077.1
3UTR TCA 72 bp GTCACCAGTGCTGAAGGCAGTAGTGCTGGGACAGCATaGGTGCCATTCCTCTGGCCATGGTTCTCATACCTA +
Preference number: 3 (lower is better)
Translates to: VTSAEGSSAGTA*VPFLWPWFSYL
Trigger: TAGGTATGAGAACCATGGCCAGAGGAATGGCACTCATGCTGTCCCAGCACTACTGCCTTCAGCACTGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR TCA 72 bp GAGGTCAGGGTATTTATTCCCCTGGCACCCTCCCTGTaGGGTTGTCTAGGCTGGTTGTATCTCTTGACTGGC +
Preference number: 3 (lower is better)
Translates to: EVRVFIPLAPSL*GCLGWLYLLTG
Trigger: GCCAGTCAAGAGATACAACCAGCCTAGACAACCTCACAGGGAGGGTGCCAGGGGAATAAATACCCTGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CCA 72 bp TACATTAATACCTTCTTACATCCTCTGGCTTTGGGCTaGGTTCAGGTAATGGGAGACAGCAGGATGGCAGGG +
Preference number: 3 (lower is better)
Translates to: YINTFLHPLALG*VQVMGDSRMAG
Trigger: CCCTGCCATCCTGCTGTCTCCCATTACCTGAACCCAGCCCAAAGCCAGAGGATGTAAGAAGGTATTAATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR GCA 72 bp CGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTaGTGGATGAGGCATCATGATGGAACTCAAGGTCTG +
Preference number: 3 (lower is better)
Translates to: RKSHSLVAKRCT*WMRHHDGTQGL
Trigger: CAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
3UTR CCA 72 bp CCCCTTCAAATCCACTGCCTACCTTATTTTCTGCCCTaGGAGGCTGACACACGTGGTTACATTAATACCTTC +
Preference number: 3 (lower is better)
Translates to: PLQIHCLPYFLP*EADTRGYINTF
Trigger: GAAGGTATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGTGGATTTGAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR CAA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGGTGGGGAACCTGAGGTaGGGTGTTCGAGACCAGCCT +
Preference number: 3 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWVGNLR*GVRDQP
Trigger: AGGCTGGTCTCGAACACCCAACCTCAGGTTCCCCAC...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638487.1
3UTR-3UTR CAA 90 bp GACTACTACAGCAACCCTATCTTAGGTCTGAGGAATCCTCCTGTGCGTAACTTAAAAAGAGATGGTATCTaGCTCTGTCACCCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: DYYSNPILGLRNPPVRNLKRDGI*LCHPGL
Trigger: CAGCCCAGGGTGACAGAGCAAGATACCATCTCTTTT...TAAGTTACGCACAGGAGGATTCCTCAGACCTAAGATAGGGTTGCTGTAGTAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR CAA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATCAGTCATCTTACAAATaGTTAAAGCAGGATGTCTGT +
Preference number: 3 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNQSSYK*LKQDVC
Trigger: ACAGACATCCTGCTTTAACAATTTGTAAGATGACTG...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CAA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGTGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 3 (lower is better)
Translates to: HRDGRCITNALYRSKSHMWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR TCA 72 bp GCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACTTGCCAGCCCATAACC +
Preference number: 3 (lower is better)
Translates to: ALPMLSIGPSPT*LLKLSTCQPIT
Trigger: GGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CAA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGTGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 3 (lower is better)
Translates to: GAVTSETEENPVAPAPDKWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
3UTR-3UTR CAA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGTTTCTATACTGCCCCTaGGACTTGAGATTAAACTAC +
Preference number: 3 (lower is better)
Translates to: HMITEAQYLPAHNLGELLFLYCP*DLRLNY
Trigger: GTAGTTTAATCTCAAGTCCAAGGGGCAGTATAGAAA...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR-3UTR CAA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATAATCCATTTGCAAGCCTaGTTCTCTAGACCTCCCATT +
Preference number: 3 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLIIHLQA*FSRPPI
Trigger: AATGGGAGGTCTAGAGAACAAGGCTTGCAAATGGAT...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR GCA 72 bp ATTTGCCCCTTCAAATCCACTGCCTACCTTATTTTCTaGCCTGGGAGGCTGACACACGTGGTTACATTAATA +
Preference number: 3 (lower is better)
Translates to: ICPFKSTAYLIF*PGRLTHVVTLI
Trigger: TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGTGGATTTGAAGGGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CCA 72 bp AAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGAACTCAAGGTCTGTTT +
Preference number: 3 (lower is better)
Translates to: KSHSLVAKRCTC*MRHHDGTQGLF
Trigger: AAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR CCA 72 bp ACTACTACTAGCAGCAGGTTACCACACTATCCCTGGTaGCTCACCTACACCCACTTCTTTGTAAATAGATCT +
Preference number: 3 (lower is better)
Translates to: TTTSSRLPHYPW*LTYTHFFVNRS
Trigger: AGATCTATTTACAAAGAAGTGGGTGTAGGTGAGCCACCAGGGATAGTGTGGTAACCTGCTGCTAGTAGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CCA 72 bp GTTACTACTACTAGCAGCAGGTTACCACACTATCCCTaGTGGCTCACCTACACCCACTTCTTTGTAAATAGA +
Preference number: 3 (lower is better)
Translates to: VTTTSSRLPHYP*WLTYTHFFVNR
Trigger: TCTATTTACAAAGAAGTGGGTGTAGGTGAGCCACCAGGGATAGTGTGGTAACCTGCTGCTAGTAGTAGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CCA 72 bp TCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTCTCTAATCAGTAGATGCAAA +
Preference number: 3 (lower is better)
Translates to: SEDPQFGLLSCQ*LQQLSLISRCK
Trigger: TTTGCATCTACTGATTAGAGAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638790.1
3UTR-3UTR CAA 90 bp CAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 3 (lower is better)
Translates to: QRSFEEVNCAEVTYIWSLFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...CAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
3UTR-3UTR CAA 90 bp TTCAAATGTACCATGATGAGGAAAGAGAGATCCTGCACTTCTGTAGCTCAGATCAGGGCACTTCTCAAATaGTTCCTCACTGAGTCCCAA +
Preference number: 3 (lower is better)
Translates to: FKCTMMRKERSCTSVAQIRALLK*FLTESQ
Trigger: TTGGGACTCAGTGAGGAACAATTTGAGAAGTGCCCT...GATCTGAGCTACAGAAGTGCAGGATCTCTCTTTCCTCATCATGGTACATTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR GCA 72 bp CATAAGAGAACATTCTGTGCCGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGGTTTGGATTTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: HKRTFCAASNFV*QCGEPGLDLGK
Trigger: TTTGCCCAAATCCAAACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR CCA 72 bp TCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCT +
Preference number: 3 (lower is better)
Translates to: SEDPQFGLLSCQ*LQQLYSLEKYA
Trigger: AGCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
3UTR-3UTR CAA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAATGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 3 (lower is better)
Translates to: GRCITNALYRSKSHMITEWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CAA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCATGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 3 (lower is better)
Translates to: NALYRSKSHMITEAQYLPWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CAA 90 bp AGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGTATTGAAACCAAATTTTACCACTCCTaGTCCGGCAGCAACAAAAAG +
Preference number: 3 (lower is better)
Translates to: RLTVPRSPISGACFCIETKFYHS*SGSNKK
Trigger: CTTTTTGTTGCTGCCGGACAAGGAGTGGTAAAATTT...GGTTTCAATACAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR CAA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 3 (lower is better)
Translates to: GAVTSETEENPVAPAPDKIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
3UTR TCA 72 bp GATAATCTGGTTTTTCACCACAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTCCCGAGAGAGCTGTGC +
Preference number: 3 (lower is better)
Translates to: DNLVFHHNVRDL*FNLNSFPRELC
Trigger: GCACAGCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGTCCCTCACATTGTGGTGAAAAACCAGATTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
3UTR TCA 72 bp AGCAGAGATATCTGCAGTGACTTAACATCACGACCATaGAGTAAACTTTTGTTGGGGTGCTCACTGACTACT +
Preference number: 3 (lower is better)
Translates to: SRDICSDLTSRP*SKLLLGCSLTT
Trigger: AGTAGTCAGTGAGCACCCCAACAAAAGTTTACTTCATGGTCGTGATGTTAAGTCACTGCAGATATCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR GCA 72 bp ACTCAGATGGGGTTTAAAAGAACAGACGGTAGTATCTaGACATGTATTCTCAGCCATTCTACTCAAGGTGTG +
Preference number: 3 (lower is better)
Translates to: TQMGFKRTDGSI*TCILSHSTQGV
Trigger: CACACCTTGAGTAGAATGGCTGAGAATACATGTGCAGATACTACCGTCTGTTCTTTTAAACCCCATCTGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR CAA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTATTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 3 (lower is better)
Translates to: AELHVPGAVTSETEENPVFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR CAA 90 bp CATAAGAGAACATTCTGTGCCGCTTCTAATTTTGTCTGCCAATGTGGGGAACCTAACTCCAATATTCAATaGCAGTTGAATGGACCTCTC +
Preference number: 3 (lower is better)
Translates to: HKRTFCAASNFVCQCGEPNSNIQ*QLNGPL
Trigger: GAGAGGTCCATTCAACTGCAATTGAATATTGGAGTT...AGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639457.1
3UTR GCA 72 bp CACCATACCCAGCCTCAAACCCATCACTTTCTATACTaGCCCTTGGACTTGAGATTAAACTACTTCATTTAT +
Preference number: 3 (lower is better)
Translates to: HHTQPQTHHFLY*PLDLRLNYFIY
Trigger: ATAAATGAAGTAGTTTAATCTCAAGTCCAAGGGGCAGTATAGAAAGTGATGGGTTTGAGGCTGGGTATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CCA 72 bp GAACGTAAAGTCTTCAGTTATCCCACTCTACTCAGATaGGGTTTAAAAGAACAGACGGTAGTATCTGCACAT +
Preference number: 3 (lower is better)
Translates to: ERKVFSYPTLLR*GLKEQTVVSAH
Trigger: ATGTGCAGATACTACCGTCTGTTCTTTTAAACCCCATCTGAGTAGAGTGGGATAACTGAAGACTTTACGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR CCA 72 bp ATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTaGCTACTCACTACAGCGACGTACCAAACAGGGAAA +
Preference number: 3 (lower is better)
Translates to: ICFSFYNSLGRY*LLTTATYQTGK
Trigger: TTTCCCTGTTTGGTACGTCGCTGTAGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR CAA 90 bp GAGGAAAGAGAGATCCTGCACTTCTGTAGCTCAGATCTCCGAGAATTTTATCTCCTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 3 (lower is better)
Translates to: EEREILHFCSSDLREFYLLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...GAGATAAAATTCTCGGAGATCTGAGCTACAGAAGTGCAGGATCTCTCTTTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639523.1
3UTR-3UTR CAA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATATAATCTGCCTCCTATaGCCTTCAGCTGTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNIICLL*PSAVLS
Trigger: AGAAAGGACAGCTGAAGGCAATAGGAGGCAGATTAT...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
3UTR TCA 72 bp CTTTTTGGAAGGTCTTTACATTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCACTTTCAGGTCCATTA +
Preference number: 3 (lower is better)
Translates to: LFGRSLHWLRGN*TIILLPLSGPL
Trigger: TAATGGACCTGAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
3UTR-3UTR CAA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATGTGCAGATTAGCCTATaGACCAAGGCAAATTTTGCA +
Preference number: 3 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNVQISL*TKANFA
Trigger: TGCAAAATTTGCCTTGGTCAATAGGCTAATCTGCAC...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
3UTR-3UTR CAA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATTGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 3 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CAA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 3 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
3UTR-3UTR CAA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATATTAGTCAAAACATGGTaGACAGAAACACTGAAAGGA +
Preference number: 3 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFILVKTW*TETLKG
Trigger: TCCTTTCAGTGTTTCTGTCAACCATGTTTTGACTAA...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640077.1
3UTR TCA 72 bp ATTCCTGATCAACATGAGATAATCAGGTTATCCCTTTaGTTTGATGGTGTTCCAGCAAAGAAATCTGATGAA +
Preference number: 3 (lower is better)
Translates to: IPDQHEIIRLSL*FDGVPAKKSDE
Trigger: TTCATCAGATTTCTTTGCTGGAACACCATCAAATCAAAGGGATAACCTGATTATCTCATGTTGATCAGGAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGACTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAGCCCGCAGCCGCGGTaGCTCAGAAGACCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLSPQPR*LRRPSG
Trigger: TCCCGAGGGTCTTCTGAGGCACCGCGGCTGCGGGCT...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCCTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCCCCGGACATGCTGGCTaGGTCGGCCAGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPPGHAG*VGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGG...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACCCCGGACATGCTGGCTaGGTCGGCCAGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHPGHAG*VGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGG...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGCGCGCACCCCGGACATaGTGGCTGCGTCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMRAPRT*WLRRPA
Trigger: CGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCG...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCCCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPPSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGG...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSPSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGG...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR TCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHSPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAAGCCCGCAGCCGCGGTaGCTCAGAAGACCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTSPQPR*LRRPSG
Trigger: TCCCGAGGGTCTTCTGAGGCACCGCGGCTGCGGGCT...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATCGCGCACCCCGGACATaGTGGCTGCGTCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHRAPRT*WLRRPA
Trigger: CGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCG...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATGATGCTGATCCGCACTaGGCGCACCCCGGACATGCT +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHDADPH*AHPGHA
Trigger: AGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATC...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGAAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRRRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp CAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: QKLEDPKVSFSCGQKVHLLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...CAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR CCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGGCACCCCGGACATGCTaGCTGCGTCGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMAPRTC*LRRPAV
Trigger: CACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGC...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCTCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp AAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCCGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: KSLRTRKSHSLVAKRCTCRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...GCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR TCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHSPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNSPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCAGCCCGCAGCCGCGGTaGCTCAGAAGACCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: ALYRSKSHMITEAQYLPASPQPR*LRRPSG
Trigger: TCCCGAGGGTCTTCTGAGGCACCGCGGCTGCGGGCT...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTACGCGCACCCCGGACATaGTGGCTGCGTCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: AELHVPGAVTSETEENPVRAPRT*WLRRPA
Trigger: CGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCG...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
CDS-3UTR GCA 90 bp GACTACTACAGCAACCCTATCTTAGGTCTGAGGAATCCTCCTGTGCGTAACTTACTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: DYYSNPILGLRNPPVRNLLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...TAAGTTACGCACAGGAGGATTCCTCAGACCTAAGATAGGGTTGCTGTAGTAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp TTAGGTCGGTACTGGCTACTCACTACAGCGACGTACCAAACAGGGAAAGTAAGAGCACCCCGGACATGCTaGCTGCGTCGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: LGRYWLLTTATYQTGKVRAPRTC*LRRPAV
Trigger: CACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGC...TCTTACTTTCCCTGTTTGGTACGTCGCTGTAGTGAGTAGCCAGTACCGACCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CCA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTTCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTSRPTS*TCFSQA
Trigger: GGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGA...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GATGCAAATTATGCTCTAGGACATAAAGGTGGTCCTCCGGACATTGCTTCTCAGCGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: DANYALGHKGGPPDIASQRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...CTGAGAAGCAATGTCCGGAGGACCACCTTTATGTCCTAGAGCATAATTTGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR CCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCCTGGAGAATCCCAGGTaGAAGGCTGGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLLENPR*KAGHEP
Trigger: TGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAG...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCCTTTCGGAGCAAAACTaGGCAGGCGCGGAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLLSEQN*AGAEAP
Trigger: TGGAGCTTCCGCGCCTGCCCAGTTTTGCTCCGAAAG...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR TCA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCAGGCCGATTCGATGCTaGTCCGCACTGCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCRPIRC*SALRAP
Trigger: GGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCT...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAGCCCGCAGCCGCGGTaGCTCAGAAGACCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHSPQPR*LRRPSG
Trigger: TCCCGAGGGTCTTCTGAGGCACCGCGGCTGCGGGCT...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCCCCGGACATGCTGGCTaGGTCGGCCAGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RLAKLSMVAAALLLRKICPGHAG*VGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGG...GCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp GGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCTCGCGCACCCCGGACATaGTGGCTGCGTCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GLLSCQWLQQLYSLEKYARAPRT*WLRRPA
Trigger: CGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCG...AGCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp TTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCCGCGCACCCCGGACATaGTGGCTGCGTCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: FIKSLRTRKSHSLVAKRCRAPRT*WLRRPA
Trigger: CGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCG...GCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TTACGAACTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGCTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LRTETEENPVAPAPDKTVLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGTTCGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639596.1
CDS-3UTR CCA 90 bp CGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCGCACCCCGGACATGCTaGCTGCGTCGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: RLAKLSMVAAALLLRKICAPRTC*LRRPAV
Trigger: CACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGC...GCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR CCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAACGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITERPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATCTGCTGGGTGGAGGCTaGAGAATCCCAGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNLLGGG*RIPGGR
Trigger: CCTTCCACCTGGGATTCTCCAGCCTCCACCCAGCAG...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp GAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EPVSEDPQFGLLSCQWLQSPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...CTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR TCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAGTGCTGGGACAGCATaGGTGCCATTCCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHSAGTA*VPFLWP
Trigger: TGGCCAGAGGAATGGCACTCATGCTGTCCCAGCACT...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGGATGCTGATCCGCACTaGGCGCACCCCGGACATGCT +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMDADPH*AHPGHA
Trigger: AGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATC...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGGATGCTGATCCGCACTaGGCGCACCCCGGACATGCT +
Preference number: 4 (lower is better)
Translates to: HMITEAQYLPAHNLGELLDADPH*AHPGHA
Trigger: AGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATC...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp AAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTGGATGCTGATCCGCACTaGGCGCACCCCGGACATGCT +
Preference number: 4 (lower is better)
Translates to: KLEDPKVSFSCGQKVHLLDADPH*AHPGHA
Trigger: AGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATC...CAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ALYRSKSHMITEAQYLPARRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCRRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp AGTTTCCAGTGTTGCCGTAATCGCAAAAGCTCAGAATTGAAGTCTCTTTGTAGCCTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: SFQCCRNRKSSELKSLCSLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...GCTACAAAGAGACTTCAATTCTGAGCTTTTGCGATTACGGCAACACTGGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS-3UTR GCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATGAGCCAAAACAGTGCTaGTGCACTCCAGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNEPKQC*CTPAWG
Trigger: TCCCCAGGCTGGAGTGCAGCAGCACTGTTTTGGCTC...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGTCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMSRPTS*TCFSQA
Trigger: GGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGA...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp AGTTTCCAGTGTTGCCGTAATCGCAAAAGCTCAGAATTGAAGTCTCTTTGTAGCCGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: SFQCCRNRKSSELKSLCSRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...GCTACAAAGAGACTTCAATTCTGAGCTTTTGCGATTACGGCAACACTGGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS-3UTR CCA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTACCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: AELHVPGAVTSETEENPVPSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGG...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
CDS-3UTR CCA 90 bp AAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCACTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: KSLRTRKSHSLVAKRCTCTSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGT...GCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640473.1
CDS-3UTR TCA 90 bp CCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQFGLLSCQWLQQLYSLESPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...TTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGAAGAGGAGGCTTCCCTaGGGAGAGCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMKRRLP*GEPGTQ
Trigger: CTGAGTTCCCGGCTCTCCGCAGGGAAGCCTCCTCTT...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACCCCGGACATGCTGGCTaGGTCGGCCAGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYPGHAG*VGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGG...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMAGTSR*HPGPPH
Trigger: ATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGC...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TTGGGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LGKGRLKRLTVPRSPISGRRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...TCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS-3UTR GCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTCTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACGCAACGCTCAGACTaGAAACAAAGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPTQRSD*KQRSWP
Trigger: GGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGT...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACACGCAACGCTCAGACTaGAAACAAAGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHTQRSD*KQRSWP
Trigger: GGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGT...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCTCCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: GLLSCQWLQQLYSLEKYAPSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGG...AGCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR CCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAACCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITEPSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGG...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCCCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000639189.1
CDS-3UTR CCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAGTTCAAGACCAGCCTaGCCAAGATGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLSSRPA*PRWQNP
Trigger: AGGGTTTTGCCATCTTGGCCAGGCTGGTCTTGAACT...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CCA 90 bp TCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGTCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: SFEEVNCAEVTYIWSLFLSSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGA...CAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAAGGCCGATTCGATGCTaGTCCGCACTGCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITERPIRC*SALRAP
Trigger: GGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCT...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR TCA 90 bp TGCACTTGCTGGATGAGGCATCATGATGGAACTCAAGGTCTGTTTATGAAACTCAGGCCGATTCGATGCTaGTCCGCACTGCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: CTCWMRHHDGTQGLFMKLRPIRC*SALRAP
Trigger: GGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCT...GAGTTTCATAAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR TCA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VTSETEENPVAPAPDKTVSPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
CDS-3UTR TCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATAGGTCAAGACTGCAGTaGACCATGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHRSRLQ*TMITPL
Trigger: CAGTGGTGTGATCATGGTTCACTGCAGTCTTGACCT...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGCCAATGTGGGGAACCTaGGGTTGGGTGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMPMWGT*GWVFET
Trigger: GGTCTCGAACACCCAACCTCAGGTTCCCCACATTGG...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR GCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAAGAGGAGGCTTCCCTaGGGAGAGCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHKRRLP*GEPGTQ
Trigger: CTGAGTTCCCGGCTCTCCGCAGGGAAGCCTCCTCTT...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGCGCGCACCCCGGACATaGTGGCTGCGTCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWRAPRT*WLRRPA
Trigger: CGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCG...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGCGCGCACCCCGGACATaGTGGCTGCGTCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLRAPRT*WLRRPA
Trigger: CGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCG...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp ACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: TNEPVSEDPQFGLLSCQWPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...CCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATCTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCCTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCCTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCGCACCCCGGACATGCTaGCTGCGTCGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFAPRTC*LRRPAV
Trigger: CACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGC...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp TTGACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LTNEPVSEDPQFGLLSCQSRPTS*TCFSQA
Trigger: GGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGA...TTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR CCA 90 bp CAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: QKLEDPKVSFSCGQKVHLPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...CAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR CCA 90 bp TTGGGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGATCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGKGRLKRLTVPRSPISGSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...TCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS-3UTR CCA 90 bp CCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAATCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PQFGLLSCQWLQQLYSLESEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...TTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR CCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATCGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCCGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATTCTTTAGGTCGGTACTaGCTACTCACTACAGCGACG +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHSLGRY*LLTTAT
Trigger: CGTCGCTGTAGTGAGTAGCCAGTACCGACCTAAAGA...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCAACCAGGTTTTGGGGTaGGGCAAGGGAGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPNQVLG*GKGGCN
Trigger: ATTACAGCCTCCCTTGCCCCACCCCAAAACCTGGTT...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640077.1
3UTR CAA 72 bp GGAATAGGACTCCACCTTCCACTGCCAAAGCTAAAGTaGCCTGATACTTGCTTCTCCTGCCCACTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: GIGLHLPLPKLK*PDTCFSCPLAA
Trigger: AGCTGCCAGTGGGCAGGAGAAGCAAGTATCAGGCAACTTTAGCTTTGGCAGTGGAAGGTGGAGTCCTATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGCCAATGTGGGGAACCTaGGGTTGGGTGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: GAVTSETEENPVAPAPDKPMWGT*GWVFET
Trigger: GGTCTCGAACACCCAACCTCAGGTTCCCCACATTGG...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR TCA 90 bp ACACCCAGGCTCAGGCAACCCTCCTGCCTCGGCCTCCCTAATAGCTATGACTATCAGAGATATCTGCAGTaGCTTAACATCACGACCATG +
Preference number: 4 (lower is better)
Translates to: TPRLRQPSCLGLPNSYDYQRYLQ*LNITTM
Trigger: CATGGTCGTGATGTTAAGTCACTGCAGATATCTCTG...ATAGTCATAGCTATTAGGGAGGCCGAGGCAGGAGGGTTGCCTGAGCCTGGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCAGCCCGCAGCCGCGGTaGCTCAGAAGACCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFSPQPR*LRRPSG
Trigger: TCCCGAGGGTCTTCTGAGGCACCGCGGCTGCGGGCT...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp GATGCAAATTATGCTCTAGGACATAAAGGTGGTCCTCCGGACATTGCTTCTCAGAAGAGGAGGCTTCCCTaGGGAGAGCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: DANYALGHKGGPPDIASQKRRLP*GEPGTQ
Trigger: CTGAGTTCCCGGCTCTCCGCAGGGAAGCCTCCTCTT...CTGAGAAGCAATGTCCGGAGGACCACCTTTATGTCCTAGAGCATAATTTGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639457.1
CDS-3UTR GCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCCCCGGACATGCTGGCTaGGTCGGCCAGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLPGHAG*VGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGG...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCCCCGGACATGCTGGCTaGGTCGGCCAGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTPGHAG*VGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGG...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACGCGCACCCCGGACATaGTGGCTGCGTCGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGRAPRT*WLRRPA
Trigger: CGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCG...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp TTGACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAAGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: LTNEPVSEDPQFGLLSCQAGTSR*HPGPPH
Trigger: ATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGC...TTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLASNFV*QCGEPE
Trigger: CTCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR CCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGGCACCCCGGACATGCTaGCTGCGTCGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWAPRTC*LRRPAV
Trigger: CACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGC...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATGCACCCCGGACATGCTaGCTGCGTCGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNAPRTC*LRRPAV
Trigger: CACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGC...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGGCACCCCGGACATGCTaGCTGCGTCGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQAPRTC*LRRPAV
Trigger: CACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGC...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp GTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCCGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: VITLPSLCTTRICSTPIFRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...GAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATGTGGGGAACCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNVGNLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGTTCCCCAC...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000639189.1
CDS-3UTR CCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACCCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAGTCTCATTCTCTTGTaGCCAAAAGGTGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLSLILL*PKGALA
Trigger: AGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACT...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000638487.1
CDS-3UTR CCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATAGTTCGAAACCAGCCTaGGCAACATGGAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHSSKPA*ATWKNP
Trigger: AGGGTTTTTCCATGTTGCCCAGGCTGGTTTCGAACT...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGCTGCTGGGTGGAGGCTaGAGAATCCCAGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VTSETEENPVAPAPDKTVLLGGG*RIPGGR
Trigger: CCTTCCACCTGGGATTCTCCAGCCTCCACCCAGCAG...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CCTCAAACCCATCACTTTCTATACTGCCCCTTGGACTTGAGATTAAACTACTTCAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PQTHHFLYCPLDLRLNYFSPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...GAAGTAGTTTAATCTCAAGTCCAAGGGGCAGTATAGAAAGTGATGGGTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR TCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACACAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: ALYRSKSHMITEAQYLPAGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGAAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp AAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTGGGTGCACTTGCTGGATaGGGCATCATGATGGAACTC +
Preference number: 4 (lower is better)
Translates to: KLEDPKVSFSCGQKVHLLGALAG*GIMMEL
Trigger: GAGTTCCATCATGATGCCTCATCCAGCAAGTGCACC...CAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR TCA 90 bp GAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGGGTGCACTTGCTGGATaGGGCATCATGATGGAACTC +
Preference number: 4 (lower is better)
Translates to: EPVSEDPQFGLLSCQWLQGALAG*GIMMEL
Trigger: GAGTTCCATCATGATGCCTCATCCAGCAAGTGCACC...CTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TTAGGTCGGTACTGGCTACTCACTACAGCGACGTACCAAACAGGGAAAGTAAGATTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: LGRYWLLTTATYQTGKVRLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...TCTTACTTTCCCTGTTTGGTACGTCGCTGTAGTGAGTAGCCAGTACCGACCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCTCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATGAAAAAGCAGAGAGCTaGTGGAAAGGCCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHEKAES*WKGLNW
Trigger: CCAATTAAGGCCTTTCCATCAGCTCTCTGCTTTTTC...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATCCCGGACATGCTGGCTaGGTCGGCCAGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNPGHAG*VGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGG...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTCCCGGACATGCTGGCTaGGTCGGCCAGCGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVPGHAG*VGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGG...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACTCGTCGTCCTGGTCTaGGCTGGACCCGGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLVVLV*AGPGAR
Trigger: CCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGGACTCGGGCAGCGGATaGAGGCCTTACCTTCCTCGT +
Preference number: 4 (lower is better)
Translates to: TNALYRSKSHMITEAQYLDSGSG*RPYLPR
Trigger: ACGAGGAAGGTAAGGCCTGCATCCGCTGCCCGAGTC...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR CCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGGAAACAAAGGAGCTaGCCCAGCAACTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTWKQRS*PSNFPR
Trigger: TCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCA...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATACGCAACGCTCAGACTaGAAACAAAGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHTQRSD*KQRSWP
Trigger: GGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGT...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATGCACCCCGGACATGCTaGCTGCGTCGGCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHAPRTC*LRRPAV
Trigger: CACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGC...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGTCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSSRPTS*TCFSQA
Trigger: GGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGA...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CATAAGAGAACATTCTGTGCCGCTTCTAATTTTGTCTGCCAATGTGGGGAACCTCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: HKRTFCAASNFVCQCGEPPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...AGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639457.1
CDS-3UTR CCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACGTCCTGGTCTGCGCTaGACCCGGCGCCCGGCCACT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQRPGLR*TRRPAT
Trigger: AGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNLLSCQ*LQQLYS
Trigger: GGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAA...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000638487.1
CDS-3UTR CCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATAGTTCGAAACCAGCCTaGGCAACATGGAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNSSKPA*ATWKNP
Trigger: AGGGTTTTTCCATGTTGCCCAGGCTGGTTTCGAACT...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGATGGAAAGGCCTTAATTaGAGAAAGCAATCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRWKGLN*RKQSRA
Trigger: AGCCCTGGATTGCTTTCTCCAATTAAGGCCTTTCCA...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTCTAGCCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSHSSLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGCTAGAGTG...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR CCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCCATTGCACTCTAGCCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPHCTLA*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGCTAGAGTGCAATG...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
3UTR CAA 72 bp AGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGC +
Preference number: 4 (lower is better)
Translates to: RSKSHMITEAQY*PAHNLGELLNC
Trigger: GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGAGGCCGATTCGATGCTaGTCCGCACTGCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWRPIRC*SALRAP
Trigger: GGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCT...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: HMITEAQYLPAHNLGELLQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGAACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRTCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCTGGTGCTGTGACATCTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPWCCDI*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCA...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATGAAAAAGCAGAGAGCTaGTGGAAAGGCCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNEKAES*WKGLNW
Trigger: CCAATTAAGGCCTTTCCATCAGCTCTCTGCTTTTTC...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCGAGAGCTTGCCTATATaGTACTACTTTCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLESLPI*YYFQCY
Trigger: GTAACACTGAAAGTAGTATCATATAGGCAAGCTCTC...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSASNFV*QCGEPG
Trigger: ACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGAACAGACGGTAGTATCTaGACATGTATTCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRTDGSI*TCILSH
Trigger: ATGGCTGAGAATACATGTGCAGATACTACCGTCTGT...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSASNFV*QCGEPE
Trigger: CTCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR CCA 90 bp TTCAAATGTACCATGATGAGGAAAGAGAGATCCTGCACTTCTGTAGCTCAGATCCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: FKCTMMRKERSCTSVAQIPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...GATCTGAGCTACAGAAGTGCAGGATCTCTCTTTCCTCATCATGGTACATTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS-3UTR CCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTPSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp CATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAACCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: HLYVQLESAQLQYSIAVEPSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGG...TTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTCCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCG +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVPSSSS*SALDPA
Trigger: CGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGG...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGGTGGGGAACCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMVGNLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGTTCCCCAC...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGCCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HMITEAQYLPAHNLGELLPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGA +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPKRCTC*MRHHDG
Trigger: TCCATCATGATGCCTCATCCAGCAAGTGCACCTTTT...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: TNALYRSKSHMITEAQYLSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPLLSCQ*LQQLSL
Trigger: TAGAGAGAGCTGCTGCAACCATTGACAGCTTAGCAA...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638790.1
ENST00000639189.1
3UTR CAA 72 bp ACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: TNEPVSEDPQFG*LSCQWLQQLYS
Trigger: GGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR TCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR TCA 90 bp CGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: RLAKLSMVAAALLLRKICGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...GCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGATGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATTTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPTCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSTCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp GATGCAAATTATGCTCTAGGACATAAAGGTGGTCCTCCGGACATTGCTTCTCAGGGTGCACTTGCTGGATaGGGCATCATGATGGAACTC +
Preference number: 4 (lower is better)
Translates to: DANYALGHKGGPPDIASQGALAG*GIMMEL
Trigger: GAGTTCCATCATGATGCCTCATCCAGCAAGTGCACC...CTGAGAAGCAATGTCCGGAGGACCACCTTTATGTCCTAGAGCATAATTTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639523.1
CDS-3UTR TCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: HMITEAQYLPAHNLGELLGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCATTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: NALYRSKSHMITEAQYLPLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCTCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGAGGTGTCTCAACTGGTaGGGTCAATCAAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: GAVTSETEENPVAPAPDKRCLNW*GQSSGR
Trigger: TCTCCCACTTGATTGACCTCACCAGTTGAGACACCT...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGACCTGTTAATACTTGTTaGGGGGCTAATTGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRPVNTC*GANWFS
Trigger: AGAAAACCAATTAGCCCCTCAACAAGTATTAACAGG...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGCCAATGTGGGGAACCTaGGGTTGGGTGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSPMWGT*GWVFET
Trigger: GGTCTCGAACACCCAACCTCAGGTTCCCCACATTGG...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR TCA 90 bp GGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTCTCAAGGTCTGTTTATaGAACTTCCTCGTCGTCCTG +
Preference number: 4 (lower is better)
Translates to: GSSIRLAKLSMVAAALLLLKVCL*NFLVVL
Trigger: CAGGACGACGAGGAAGTTTCATAAACAGACCTTGAG...AAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640473.1
CDS-3UTR TCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCTCTGCAACTGTTACCTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSSATVT*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGGTAACAGTTGCAGA...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCATCTTTAGATCCTCCTaGGTCTGCCACCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: EATVMADALPMLSIGPSPIFRSS*VCHLFL
Trigger: AAGAAATAGGTGGCAGACTCAGGAGGATCTAAAGAT...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp ACACCCAGGCTCAGGCAACCCTCCTGCCTCGGCCTCCCTAATAGCTATGACTATTCTCATCTAGATCACTaGATATGGTGTAACATTTGC +
Preference number: 4 (lower is better)
Translates to: TPRLRQPSCLGLPNSYDYSHLDH*IWCNIC
Trigger: GCAAATGTTACACCATATTCAGTGATCTAGATGAGA...ATAGTCATAGCTATTAGGGAGGCCGAGGCAGGAGGGTTGCCTGAGCCTGGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCAAGAGGAGGCTTCCCTaGGGAGAGCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFKRRLP*GEPGTQ
Trigger: CTGAGTTCCCGGCTCTCCGCAGGGAAGCCTCCTCTT...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCGATGCTGATCCGCACTaGGCGCACCCCGGACATGCT +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLDADPH*AHPGHA
Trigger: AGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATC...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGGATGCTGATCCGCACTaGGCGCACCCCGGACATGCT +
Preference number: 4 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWDADPH*AHPGHA
Trigger: AGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATC...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTRRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCRRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp AATTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: NFIFIKSLRTRKSHSLVARRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...GGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp ACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGCTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: TNEPVSEDPQFGLLSCQWLVAKR*TCWMRH
Trigger: ATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAG...CCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR GCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCCTGGGAGGTAGACGTTaGGGTGAGCCGAGACTGCGC +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLLGGRR*GEPRLR
Trigger: GCGCAGTCTCGGCTCACCGCAACGTCTACCTCCCAG...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR GCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAGGGGGCAATTTAGAATaGATTTTGTCACCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTGGNLE*ILSPVL
Trigger: CAGCACTGGTGACAAAATGCATTCTAAATTGCCCCC...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTSRPTS*TCFSQA
Trigger: GGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGA...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACCTCTCTAATCTCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LESAQLQYSIAVEWTSLISEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...GATTAGAGAGGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639457.1
CDS-3UTR CCA 90 bp TTGGGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGACCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGKGRLKRLTVPRSPISGPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...TCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CCA 90 bp GAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: EPVSEDPQFGLLSCQWLQLLSCQ*LQQLYS
Trigger: GGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAA...CTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR CCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGCATTGCACTCTAGCCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HMITEAQYLPAHNLGELLHCTLA*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGCTAGAGTGCAATG...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR CCA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCATGGGAGACAGCAGGATaGCAGGGAAGAGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: NALYRSKSHMITEAQYLPWETAG*QGRVRS
Trigger: TGACCTCACTCTTCCCTGCCATCCTGCTGTCTCCCA...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CAA 72 bp CGTGGTTACATTAATACCTTCTTACATCCTCTGGCTTaGGGCTGGGTTCAGGTAATGGGAGACAGCAGGATG +
Preference number: 4 (lower is better)
Translates to: RGYINTFLHPLA*GWVQVMGDSRM
Trigger: CATCCTGCTGTCTCCCATTACCTGAACCCAGCCCAAAGCCAGAGGATGTAAGAAGGTATTAATGTAACCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CAA 72 bp ACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTGCAGCAGCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: TNEPVSEDPQFG*LSCQWLQQLSL
Trigger: TAGAGAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638790.1
CDS-3UTR TCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATAGGCCGATTCGATGCTaGTCCGCACTGCGCGCACCC +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNRPIRC*SALRAP
Trigger: GGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCT...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR TCA 90 bp AATTTGGACATCAAGAGGACAGTAATCTTCAGGTATCTTTTTATCCAGATCGAGAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NLDIKRTVIFRYLFIQIESPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...CTCGATCTGGATAAAAAGATACCTGAAGATTACTGTCCTCTTGATGTCCAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS-3UTR TCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGAAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGSPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR TCA 90 bp GATGCAAATTATGCTCTAGGACATAAAGGTGGTCCTCCGGACATTGCTTCTCAGCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: DANYALGHKGGPPDIASQQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...CTGAGAAGCAATGTCCGGAGGACCACCTTTATGTCCTAGAGCATAATTTGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
CDS-3UTR TCA 90 bp TTAGTCAGTCTTTCTGCCCCCTTCAATAAGATTTGTGCTGCTCCAGCAAGTGACCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LVSLSAPFNKICAAPASDQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...GTCACTTGCTGGAGCAGCACAAATCTTATTGAAGGGGGCAGAAAGACTGACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCTGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCTTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: HMITEAQYLPAHNLGELLKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATTTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000638487.1
CDS-3UTR TCA 90 bp GAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGTGGTGCTGTGACATCTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: EPVSEDPQFGLLSCQWLQWCCDI*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCA...CTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCTGGTGCTGTGACATCTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: ALYRSKSHMITEAQYLPAWCCDI*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCA...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QRSFEEVNCAEVTYIWSLWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...CAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp GGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: GKGRLKRLTVPRSPISGANGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...GGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGTCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: GAVTSETEENPVAPAPDKSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATTCCATGATTTGTTACTaGTTCATGACAAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHSMICY*FMTSRE
Trigger: TTCTCTGCTTGTCATGAATCAGTAACAAATCATGGA...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGTTATCCCTTTGATTTaGTGGTGTTCCAGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTVIPLI*WCSSKE
Trigger: TTCTTTGCTGGAACACCATCAAATCAAAGGGATAAC...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCCTGGCACCCTCCCTGTaGGGTTGTCTAGGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTLAPSL*GCLGWL
Trigger: CAACCAGCCTAGACAACCTCACAGGGAGGGTGCCAG...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATAGATGGCAGGGAAGAGTaGGGTCAGGGTATTTATTCC +
Preference number: 4 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLIDGREE*GQGIYS
Trigger: GGAATAAATACCCTGACCTCACTCTTCCCTGCCATC...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTTAACATCACGACCATaGAGTAAACTTTTGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHLTSRP*SKLLLG
Trigger: CCCCAACAAAAGTTTACTTCATGGTCGTGATGTTAA...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGAAGAGGAGGCTTCCCTaGGGAGAGCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWKRRLP*GEPGTQ
Trigger: CTGAGTTCCCGGCTCTCCGCAGGGAAGCCTCCTCTT...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCAAGAGGAGGCTTCCCTaGGGAGAGCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTKRRLP*GEPGTQ
Trigger: CTGAGTTCCCGGCTCTCCGCAGGGAAGCCTCCTCTT...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp AATTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAGAGGAGGCTTCCCTaGGGAGAGCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: NFIFIKSLRTRKSHSLVAKRRLP*GEPGTQ
Trigger: CTGAGTTCCCGGCTCTCCGCAGGGAAGCCTCCTCTT...GGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000640473.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGATGCTGATCCGCACTaGGCGCACCCCGGACATGCT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTDADPH*AHPGHA
Trigger: AGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGATGCTGATCCGCACTaGGCGCACCCCGGACATGCT +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVDADPH*AHPGHA
Trigger: AGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATC...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp CATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAAAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: HLYVQLESAQLQYSIAVERRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...TTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp GTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: VITLPSLCTTRICSTPIFRRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...GAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTRRARF*DMDSGG
Trigger: GCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATCTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGCTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: GAVTSETEENPVAPAPDKLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMASNFV*QCGEPG
Trigger: ACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: HMITEAQYLPAHNLGELLHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCCTTATAAGGAGAGCTTaGCTATATGATACTACTTTC +
Preference number: 4 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLLIRRA*LYDTTF
Trigger: GAAAGTAGTATCATATAGGCAAGCTCTCCTTATAAG...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATTCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHSRPTS*TCFSQA
Trigger: GGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGA...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCTCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VITLPSLCTTRICSTPIFSRPTS*TCFSQA
Trigger: GGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGA...GAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTSRPTS*TCFSQA
Trigger: GGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp TCAATTGCAGTTGAATGGACCTCTCTAATCAGTAGATGCAAATTATGCTCTAGGCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: SIAVEWTSLISRCKLCSRPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...CCTAGAGCATAATTTGCATCTACTGATTAGAGAGGTCCATTCAACTGCAATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639457.1
CDS-3UTR CCA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCTCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATTCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATTTTGTCTGCCAATGTaGGGAACCTGGTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTFCLPM*GTWFGF
Trigger: AAATCCAAACCAGGTTCCCCACATTGGCAGACAAAA...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGAGTCTCATTCTCTTGTaGCCAAAAGGTGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMSLILL*PKGALA
Trigger: AGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACT...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp CCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAGTTCGAAACCAGCCTaGGCAACATGGAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: PQFGLLSCQWLQQLYSLESSKPA*ATWKNP
Trigger: AGGGTTTTTCCATGTTGCCCAGGCTGGTTTCGAACT...TTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR TCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSISPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAAGCCCGAACCCTGGCTaGAGTCTATCCGCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQSPNPG*SLSAGP
Trigger: TGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAACAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITEQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMTCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATCTCAAGGTCTGTTTATaGAACTCTCTAATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNLKVCL*NSLISR
Trigger: TCTACTGATTAGAGAGTTTCATAAACAGACCTTGAG...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000638487.1
CDS-3UTR TCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCTTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: NALYRSKSHMITEAQYLPVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CATAAGAGAACATTCTGTGCCGCTTCTAATTTTGTCTGCCAATGTGGGGAACCTGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HKRTFCAASNFVCQCGEPVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...AGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
CDS-3UTR TCA 90 bp TCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: SFEEVNCAEVTYIWSLFLGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...CAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GACTACTACAGCAACCCTATCTTAGGTCTGAGGAATCCTCCTGTGCGTAACTTATCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: DYYSNPILGLRNPPVRNLSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...TAAGTTACGCACAGGAGGATTCCTCAGACCTAAGATAGGGTTGCTGTAGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGGGTGGGCGGATCAATTaGGGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWGGRIN*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAATTGATCCGCCCACC...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAATGTACCTGGTGCTGTaGCATTTGCATATTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTMYLVL*HLHICS
Trigger: TGAACAAATATGCAAATGTCACAGCACCAGGTACAT...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533133.6
CDS-3UTR TCA 90 bp CCTCAAACCCATCACTTTCTATACTGCCCCTTGGACTTGAGATTAAACTACTTCTCTGTCACCCTGGGCTaGAGTACAGTGGGACCAATT +
Preference number: 4 (lower is better)
Translates to: PQTHHFLYCPLDLRLNYFSVTLG*STVGPI
Trigger: AATTGGTCCCACTGTACTTCAGCCCAGGGTGACAGA...GAAGTAGTTTAATCTCAAGTCCAAGGGGCAGTATAGAAAGTGATGGGTTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHAGTSR*HPGPPH
Trigger: ATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGC...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTAGTSR*HPGPPH
Trigger: ATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGC...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
CDS-3UTR GCA 90 bp CATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAAGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: HLYVQLESAQLQYSIAVEAGTSR*HPGPPH
Trigger: ATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGC...TTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp CGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCCTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: RLAKLSMVAAALLLRKICLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...GCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTACTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: AELHVPGAVTSETEENPVLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp TTAGGTCGGTACTGGCTACTCACTACAGCGACGTACCAAACAGGGAAAGTAAGACGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGRYWLLTTATYQTGKVRRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...TCTTACTTTCCCTGTTTGGTACGTCGCTGTAGTGAGTAGCCAGTACCGACCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: ALYRSKSHMITEAQYLPAWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGATCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: PATRKAETEGSPKPGRSRSLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GAGGAAAGAGAGATCCTGCACTTCTGTAGCTCAGATCTCCGAGAATTTTATCTCCTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EEREILHFCSSDLREFYLLVAKR*TCWMRH
Trigger: ATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAG...GAGATAAAATTCTCGGAGATCTGAGCTACAGAAGTGCAGGATCTCTCTTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR GCA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGCAGTTGAATGGACTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTAVEWT*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAGTCCATTCAACTGC...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGCTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCAGTGAGCCAAAACAGTaGTGCTGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSSEPKQ*CCTPAW
Trigger: CCAGGCTGGAGTGCAGCAGCACTGTTTTGGCTCACT...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACTGGGAGGTAGACGTTaGGGTGAGCCGAGACTGCGC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLGGRR*GEPRLR
Trigger: GCGCAGTCTCGGCTCACCGCAACGTCTACCTCCCAG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR GCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTCTGGGAGGTAGACGTTaGGGTGAGCCGAGACTGCGC +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSILGGRR*GEPRLR
Trigger: GCGCAGTCTCGGCTCACCGCAACGTCTACCTCCCAG...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR GCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTGGTGCTGTGACATTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHWCCDI*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAATGTCACAGCACCA...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533133.6
CDS-3UTR GCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACACATCACTTTCTATACTaGCCCTTGGACTTGAGATTA +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTHHFLY*PLDLRL
Trigger: TAATCTCAAGTCCAAGGGGCAGTATAGAAAGTGATG...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATCTCAGGCAACCCTCCTaGCTCGGCCTCCCTAATAGC +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHLRQPS*LGLPNS
Trigger: GCTATTAGGGAGGCCGAGGCAGGAGGGTTGCCTGAG...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAAAGTTGCCTGATACTTaGTTCTCCTGCCCACTGGCA +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITEKLPDT*FSCPLA
Trigger: TGCCAGTGGGCAGGAGAAGCAAGTATCAGGCAACTT...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp GGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCTTGGAAACAAAGGAGCTaGCCCAGCAACTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: GLLSCQWLQQLYSLEKYAWKQRS*PSNFPR
Trigger: TCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCA...AGCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR CCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGTGGAAACAAAGGAGCTaGCCCAGCAACTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: TNALYRSKSHMITEAQYLWKQRS*PSNFPR
Trigger: TCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCA...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGTTTTGTCTGCCAATGTaGGGAACCTGGTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: HMITEAQYLPAHNLGELLFCLPM*GTWFGF
Trigger: AAATCCAAACCAGGTTCCCCACATTGGCAGACAAAA...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGA +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHKRCTC*MRHHDG
Trigger: TCCATCATGATGCCTCATCCAGCAAGTGCACCTTTT...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATCTTAAAGGAGACAACTaGAGGAAGAGGTTATCAATA +
Preference number: 4 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNLKGDN*RKRLSI
Trigger: TATTGATAACCTCTTCCTCCAGTTGTCTCCTTTAAG...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGCACTCTAGCCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: VTSETEENPVAPAPDKTVHSSLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGCTAGAGTG...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR CCA 90 bp TTGACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAACACTCTAGCCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: LTNEPVSEDPQFGLLSCQHSSLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGCTAGAGTG...TTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000638790.1
3UTR CAA 72 bp GTGCCATTCCTCTGGCCATGGTTCTCATACCTAGCTTaGATCCCTATCCATTTGCAAGCCTTGTTCTCTAGA +
Preference number: 4 (lower is better)
Translates to: VPFLWPWFSYLA*IPIHLQALFSR
Trigger: TCTAGAGAACAAGGCTTGCAAATGGATAGGGATCAAAGCTAGGTATGAGAACCATGGCCAGAGGAATGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PQFGLLSCQWLQQLYSLEINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...TTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KSLRTRKSHSLVAKRCTCINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...GCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGTTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: HRDGRCITNALYRSKSHMLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...CATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: TNALYRSKSHMITEAQYLGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AATTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: NFIFIKSLRTRKSHSLVALGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...GGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VTSETEENPVAPAPDKTVWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GACTACTACAGCAACCCTATCTTAGGTCTGAGGAATCCTCCTGTGCGTAACTTATGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: DYYSNPILGLRNPPVRNLWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...TAAGTTACGCACAGGAGGATTCCTCAGACCTAAGATAGGGTTGCTGTAGTAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: QKLEDPKVSFSCGQKVHLNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...CAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAATCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITESTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATAAGAGGAGGCTTCCCTaGGGAGAGCCGGGAACTCAG +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNKRRLP*GEPGTQ
Trigger: CTGAGTTCCCGGCTCTCCGCAGGGAAGCCTCCTCTT...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSIPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCG +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQPTSWT*FSQADS
Trigger: CGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQAGTSR*HPGPPH
Trigger: ATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGC...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNAGTSR*HPGPPH
Trigger: ATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGC...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSIAGTSR*HPGPPH
Trigger: ATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGC...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR GCA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: GHRDGRCITNALYRSKSHSLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR GCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACCTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYLVAKR*TCWMRH
Trigger: ATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAG...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCTGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: GGHRDGRCITNALYRSKSCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCCTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GATGCAAATTATGCTCTAGGACATAAAGGTGGTCCTCCGGACATTGCTTCTCAGGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: DANYALGHKGGPPDIASQASNFV*QCGEPE
Trigger: CTCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...CTGAGAAGCAATGTCCGGAGGACCACCTTTATGTCCTAGAGCATAATTTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR CCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATACGCAACGCTCAGACTaGAAACAAAGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNTQRSD*KQRSWP
Trigger: GGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGT...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACG +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSIPDSAT*TAGAGT
Trigger: CGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGG...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCTCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639596.1
CDS-3UTR CCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATCGGAGCCCGAACCCTaGCTGAAGTCTATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQSEPEP*LKSIRW
Trigger: CCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp AAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGTATTGAAGTGGGGAACCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: KRLTVPRSPISGACFCIEVGNLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGTTCCCCAC...TTCAATACAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CCA 90 bp TCTCCAACTTTTCGAAGTTTCCAGTGTTGCCGTAATCGCAAAAGCTCAGAATTGGTGGGGAACCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: SPTFRSFQCCRNRKSSELVGNLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGTTCCCCAC...CAATTCTGAGCTTTTGCGATTACGGCAACACTGGAAACTTCGAAAAGTTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CCA 90 bp TTGGGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGATTTTGTCTGCCAATGTaGGGAACCTGGTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: LGKGRLKRLTVPRSPISGFCLPM*GTWFGF
Trigger: AAATCCAAACCAGGTTCCCCACATTGGCAGACAAAA...TCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CCA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGA +
Preference number: 4 (lower is better)
Translates to: AELHVPGAVTSETEENPVKRCTC*MRHHDG
Trigger: TCCATCATGATGCCTCATCCAGCAAGTGCACCTTTT...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CCA 90 bp TTGACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAAAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGA +
Preference number: 4 (lower is better)
Translates to: LTNEPVSEDPQFGLLSCQKRCTC*MRHHDG
Trigger: TCCATCATGATGCCTCATCCAGCAAGTGCACCTTTT...TTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGTCAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR CCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGAAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTGGAGAATCCCAGGTaGAAGGCTGGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGLENPR*KAGHEP
Trigger: TGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAG...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATCTGGAGAATCCCAGGTaGAAGGCTGGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNLENPR*KAGHEP
Trigger: TGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAG...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACTGCTGGGTGGAGGCTaGAGAATCCCAGGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLLGGG*RIPGGR
Trigger: CCTTCCACCTGGGATTCTCCAGCCTCCACCCAGCAG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp CATAAGAGAACATTCTGTGCCGCTTCTAATTTTGTCTGCCAATGTGGGGAACCTCATTGCACTCTAGCCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HKRTFCAASNFVCQCGEPHCTLA*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGCTAGAGTGCAATG...AGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR TCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGTGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: GAVTSETEENPVAPAPDKCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGTTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GAVTSETEENPVAPAPDKLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGTTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QKLEDPKVSFSCGQKVHLLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...CAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QKLEDPKVSFSCGQKVHLAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...CAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: GRLKRLTVPRSPISGACFAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...AAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR TCA 90 bp GAACCTGGTTTGGATTTGGGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: EPGLDLGKGRLKRLTVPRFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...CCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR TCA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATAACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLITCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ALYRSKSHMITEAQYLPANVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp CAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGCTCAAGGTCTGTTTATaGAACTCTCTAATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: QRSFEEVNCAEVTYIWSLLKVCL*NSLISR
Trigger: TCTACTGATTAGAGAGTTTCATAAACAGACCTTGAG...CAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATGGTGCACTTGCTGGATaGGGCATCATGATGGAACTC +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNGALAG*GIMMEL
Trigger: GAGTTCCATCATGATGCCTCATCCAGCAAGTGCACC...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGGGTGCACTTGCTGGATaGGGCATCATGATGGAACTC +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLGALAG*GIMMEL
Trigger: GAGTTCCATCATGATGCCTCATCCAGCAAGTGCACC...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGTTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: EPVSEDPQFGLLSCQWLQFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...CTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR TCA 90 bp CATAAGAGAACATTCTGTGCCGCTTCTAATTTTGTCTGCCAATGTGGGGAACCTTGGTGCTGTGACATCTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: HKRTFCAASNFVCQCGEPWCCDI*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCA...AGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
CDS-3UTR TCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATAGCTTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: AQLQYSIAVEWTCIFVHSLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...GCTATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGATTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAATGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITEWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCATATTCAATTGCAGTTaGATGGACCTCTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: ALYRSKSHMITEAQYLPAIFNCS*MDLSNQ
Trigger: CTGATTAGAGAGGTCCATTCAACTGCAATTGAATAT...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639457.1
CDS-3UTR TCA 90 bp AGGAAAGAGAGATCCTGCACTTCTGTAGCTCAGATCTCCGAGAATTTTATCTCCGCAGCAACAAAAAGATaGCGACCAAGTATCCTTACG +
Preference number: 4 (lower is better)
Translates to: RKERSCTSVAQISENFISAATKR*RPSILT
Trigger: CGTAAGGATACTTGGTCGTCATCTTTTTGTTGCTGC...GGAGATAAAATTCTCGGAGATCTGAGCTACAGAAGTGCAGGATCTCTCTTTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR GCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGCTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACCTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAACGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITERSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: ATVMADALPMLSIGPSPTSLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR GCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSLVAKR*TCWMRH
Trigger: ATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAG...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000638487.1
CDS-3UTR GCA 90 bp TTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAACTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: FHFYQKLEDPKVSFSCGQLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...TTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAACACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITEHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGCCTAAAGAGATAATCTaGCTCCTATTGCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: VTSETEENPVAPAPDKTVPKEII*LLLPSA
Trigger: AGCTGAAGGCAATAGGAGGCAGATTATCTCTTTAGG...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATAGTCAGCAGAGATATCTaGAGTGACTTAACATCACGA +
Preference number: 4 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLIVSRDI*SDLTSR
Trigger: TCGTGATGTTAAGTCACTGCAGATATCTCTGCTGAC...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAACGCAACGCTCAGACTaGAAACAAAGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTTQRSD*KQRSWP
Trigger: GGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTCCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CCA 90 bp TTAGTCAGTCTTTCTGCCCCCTTCAATAAGATTTGTGCTGCTCCAGCAAGTGACTTTTGTCTGCCAATGTaGGGAACCTGGTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: LVSLSAPFNKICAAPASDFCLPM*GTWFGF
Trigger: AAATCCAAACCAGGTTCCCCACATTGGCAGACAAAA...GTCACTTGCTGGAGCAGCACAAATCTTATTGAAGGGGGCAGAAAGACTGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CCA 90 bp CAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAAAGTCTCATTCTCTTGTaGCCAAAAGGTGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: QFGLLSCQWLQQLYSLEKSLILL*PKGALA
Trigger: AGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACT...TTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR CCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCAGCATAGTCACCACTTaGGGAGGCCACCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFSIVTT*GGHRDG
Trigger: GCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCT...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGTGGAAAGGCCTTAATTaGAGAAAGCAATCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TNALYRSKSHMITEAQYLWKGLN*RKQSRA
Trigger: AGCCCTGGATTGCTTTCTCCAATTAAGGCCTTTCCA...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATCCACACTATCCCTGGTaGCTCACCTACACCCACTTC +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHPHYPW*LTYTHF
Trigger: GAAGTGGGTGTAGGTGAGCCACCAGGGATAGTGTGG...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
3UTR CAA 72 bp CTTTACATAAGAGAACATTCTGTGCCGCTTCTAATTTaGTCTGCCAATGTGGGGAACCTGAGGTTGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LYIREHSVPLLI*SANVGNLRLGV
Trigger: AACACCCAACCTCAGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR TCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR TCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR TCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR TCA 90 bp GTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: VITLPSLCTTRICSTPIFGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...GAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NALYRSKSHMITEAQYLPINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGTGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: VTSETEENPVAPAPDKTVCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTATGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: AELHVPGAVTSETEENPVCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GAVTSETEENPVAPAPDKFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATGGTGCACTTGCTGGATaGGGCATCATGATGGAACTC +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNGALAG*GIMMEL
Trigger: GAGTTCCATCATGATGCCTCATCCAGCAAGTGCACC...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000638487.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGGTGCACTTGCTGGATaGGGCATCATGATGGAACTC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTGALAG*GIMMEL
Trigger: GAGTTCCATCATGATGCCTCATCCAGCAAGTGCACC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: QKLEDPKVSFSCGQKVHLNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...CAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATTGGGGAGGCCACCGTaGTGGCAGATGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLGRPP*WQMHYQ
Trigger: TTGGTAATGCATCTGCCATCACGGTGGCCTCCCCAA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCTCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAGGTCAAGACTGCAGTaGACCATGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLRSRLQ*TMITPL
Trigger: CAGTGGTGTGATCATGGTTCACTGCAGTCTTGACCT...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp TTATCTCCAACTTTTCGAAGTTTCCAGTGTTGCCGTAATCGCAAAAGCTCAGAAATCAATTGCAACGTCTaGGGATTCTTCCTCGTCGTC +
Preference number: 4 (lower is better)
Translates to: LSPTFRSFQCCRNRKSSEINCNV*GFFLVV
Trigger: GACGACGAGGAAGAATCCTCAGACGTTGCAATTGAT...TTCTGAGCTTTTGCGATTACGGCAACACTGGAAACTTCGAAAAGTTGGAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS-3UTR TCA 90 bp GGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGCACAGGATATTCTTTTaGAATTACCCTGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: GAVTSETEENPVAPAPDKHRIFF*NYPGLD
Trigger: ATCCAAACCAGGGTAATTTCAAAAGAATATCCTGTG...CTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCACAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS-3UTR TCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACATTGAACTCCCAACCTaGAGTGATACTCTCGCTTCA +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYIELPT*SDTLAS
Trigger: TGAAGCGAGAGTATCACTTCAGGTTGGGAGTTCAAT...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACCGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp AAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGTATTGAAGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: KRLTVPRSPISGACFCIEASNFV*QCGEPG
Trigger: ACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...TTCAATACAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR GCA 90 bp TTACGAACTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: LRTETEENPVAPAPDKTVWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGTTCGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639596.1
CDS-3UTR GCA 90 bp GGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTTGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: GSSIRLAKLSMVAAALLLCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...AAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGTGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: EPVSEDPQFGLLSCQWLQCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...CTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACCTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATCTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCCTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: VITLPSLCTTRICSTPIFLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...GAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTCTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR GCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGATATGGTGTAACATTTaGCCCTTCAAATCCACTGCC +
Preference number: 4 (lower is better)
Translates to: TNALYRSKSHMITEAQYLIWCNI*PFKSTA
Trigger: GGCAGTGGATTTGAAGGGGCAAATGTTACACCATAT...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATTGGAAACAAAGGAGCTaGCCCAGCAACTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNWKQRS*PSNFPR
Trigger: TCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCA...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTACGCAACGCTCAGACTaGAAACAAAGGAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSITQRSD*KQRSWP
Trigger: GGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGT...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR CCA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGGTGGGGAACCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQVGNLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGTTCCCCAC...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR CCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCGTGGGGAACCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTVGNLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGTTCCCCAC...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGCCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR CCA 90 bp AAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGTATTGAAAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGA +
Preference number: 4 (lower is better)
Translates to: KRLTVPRSPISGACFCIEKRCTC*MRHHDG
Trigger: TCCATCATGATGCCTCATCCAGCAAGTGCACCTTTT...TTCAATACAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR CCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFLLSCQ*LQQLYS
Trigger: GGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAA...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp CCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTGGATGAGGCATCAAAAACAATCCAACCTTaGAGAAAAATGCTAGCAACT +
Preference number: 4 (lower is better)
Translates to: PKVSFSCGQKVHLLDEASKTIQP*RKMLAT
Trigger: AGTTGCTAGCATTTTTCTCCAAGGTTGGATTGTTTT...TGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACCTTATTTTCTGCCCTaGGAGGCTGACACACGTGGT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTPYFLP*EADTRG
Trigger: ACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATGCTTCTCCTGCCCACTaGCAGCTTAAGCAAAGACAT +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNASPAH*QLKQRH
Trigger: ATGTCTTTGCTTAAGCTGCCAGTGGGCAGGAGAAGC...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TNALYRSKSHMITEAQYLLLSCQ*LQQLCF
Trigger: AAAACAGAGCTGCTGCAACCATTGACAGCTTAGCAA...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638518.1
3UTR CAA 72 bp CTTTACATAAGAGAACATTCTGTGCCGCTTCTAATTTaGTCTGCCAATGTGGGGAACCTGGTTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LYIREHSVPLLI*SANVGNLVWIW
Trigger: CCAAATCCAAACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
CDS-3UTR TCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR TCA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR TCA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATAGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFIGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGGAGGAAGTGCATCCTaGGAGACAGGATCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSIGGSAS*ETGSRV
Trigger: GACTCTTGATCCTGTCTCTCAGGATGCACTTCCTCC...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGTATTGAAACCTTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLTVPRSPISGACFCIETLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...GGTTTCAATACAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR TCA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCATTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: NALYRSKSHMITEAQYLPLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GAAAGAGAGATCCTGCACTTCTGTAGCTCAGATCTCCGAGAATTTTATCTCCAAACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: EREILHFCSSDLREFYLQTCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...TTGGAGATAAAATTCTCGGAGATCTGAGCTACAGAAGTGCAGGATCTCTCTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp TTGACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAAAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: LTNEPVSEDPQFGLLSCQNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...TTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639523.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAGGTGCACTTGCTGGATaGGGCATCATGATGGAACTC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQGALAG*GIMMEL
Trigger: GAGTTCCATCATGATGCCTCATCCAGCAAGTGCACC...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTAGGTCAAGACTGCAGTaGACCATGATCACACCACTG +
Preference number: 4 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTRSRLQ*TMITPL
Trigger: CAGTGGTGTGATCATGGTTCACTGCAGTCTTGACCT...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACAGGTGTCTCAACTGGTaGGGTCAATCAAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNRCLNW*GQSSGR
Trigger: TCTCCCACTTGATTGACCTCACCAGTTGAGACACCT...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAGGTCCATTACGAACTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSRSITN*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGTTCGTAATGGACCT...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639596.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTGQREG*NFTTPC
Trigger: ACAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATGTTGGGGTGCTCACTaGCTACTACAGCAACCCTAT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTCWGAH*LLQQPY
Trigger: ATAGGGTTGCTGTAGTAGTCAGTGAGCACCCCAACA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR GCA 90 bp TTGATATATGCAGACCCCTCTAAATCACTAGGAATTTGGACATCAAGAGGACAGCGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LIYADPSKSLGIWTSRGQRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...CTGTCCTCTTGATGTCCAAATTCCTAGTGATTTAGAGGGGTCTGCATATATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR GCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTASNFV*QCGEPG
Trigger: ACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFASNFV*QCGEPG
Trigger: ACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTLVAKR*TCWMRH
Trigger: ATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR GCA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGCAGTTGAATGGACTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: AELHVPGAVTSETEENPVAVEWT*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAGTCCATTCAACTGC...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAATGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: PQFGLLSCQWLQQLYSLECTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...TTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCTGAAGCTCAGTACTTaGCAGCCCATAACCTTGGCG +
Preference number: 4 (lower is better)
Translates to: ESAQLQYSIAVEWTCIFVLKLST*QPITLA
Trigger: CGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAG...AACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CCTCAAACCCATCACTTTCTATACTGCCCCTTGGACTTGAGATTAAACTACTTCAAACTTTTGTTGGGGTaGTCACTGACTACTACAGCA +
Preference number: 4 (lower is better)
Translates to: PQTHHFLYCPLDLRLNYFKLLLG*SLTTTA
Trigger: TGCTGTAGTAGTCAGTGAGCACCCCAACAAAAGTTT...GAAGTAGTTTAATCTCAAGTCCAAGGGGCAGTATAGAAAGTGATGGGTTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGAAACAAAGGAGCTaGCCCAGCAACTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNWKQRS*PSNFPR
Trigger: TCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCA...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATGTGGGGAACCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHVGNLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGTTCCCCAC...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGTGGGGAACCTGGTTTaGATTTGGGCAAAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTVGNLV*IWAKVV
Trigger: AACGACCTTTGCCCAAATCCAAACCAGGTTCCCCAC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLLLSCQ*LQQLYS
Trigger: GGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAA...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp AATTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: NFIFIKSLRTRKSHSLVALLSCQ*LQQLYS
Trigger: GGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAA...GGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR CCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCCCACTCTACTCAGATaGGGTTTAAAAGAACAGACG +
Preference number: 4 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSPTLLR*GLKEQT
Trigger: CGTCTGTTCTTTTAAACCCCATCTGAGTAGAGTGGG...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATAGGCCAAAGGGAAGGCTaGAATTTTACCACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFIGQREG*NFTTPS
Trigger: GGAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCC...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639596.1
CDS-3UTR TCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQQIVPH*VPRPKG
Trigger: TCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CCGAGGTCACCTATATCTGGAGCCTGTTTTTGTATTGAAACCTTGATATATGCAATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRSPISGACFCIETLIYAINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...TGCATATATCAAGGTTTCAATACAAAAACAGGCTCCAGATATAGGTGACCTCGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp CCTCAAACCCATCACTTTCTATACTGCCCCTTGGACTTGAGATTAAACTACTTCGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: PQTHHFLYCPLDLRLNYFAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...GAAGTAGTTTAATCTCAAGTCCAAGGGGCAGTATAGAAAGTGATGGGTTTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAATTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITEFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAACTCAAGGTCTGTTTATaGAACTCTCTAATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITELKVCL*NSLISR
Trigger: TCTACTGATTAGAGAGTTTCATAAACAGACCTTGAG...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR TCA 90 bp AGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGTTTTTGTATTGAAACCTTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: RLTVPRSPISGACFCIETFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...GGTTTCAATACAAAAACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCATTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: NALYRSKSHMITEAQYLPFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAATTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: SIRLAKLSMVAAALLLRKFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...TTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR TCA 90 bp ACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: TNALYRSKSHMITEAQYLNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...CAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITENIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATTGGTGCTGTGACATCTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNWCCDI*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCA...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATGTCCCACATGATTACTaGAGCTCAGTACTTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNVPHDY*SSVLAS
Trigger: GCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGAC...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAAGGTGTCTCAACTGGTaGGGTCAATCAAGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQRCLNW*GQSSGR
Trigger: TCTCCCACTTGATTGACCTCACCAGTTGAGACACCT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGGAAAAAGCAGAGAGCTaGTGGAAAGGCCTTAATTGG +
Preference number: 4 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWEKAES*WKGLNW
Trigger: CCAATTAAGGCCTTTCCATCAGCTCTCTGCTTTTTC...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp TCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAGATTTGAACCACATATaGAAACAATCCAACCTTGGA +
Preference number: 4 (lower is better)
Translates to: SIRLAKLSMVAAALLLRKDLNHI*KQSNLG
Trigger: TCCAAGGTTGGATTGTTTTCATATGTGGTTCAAATC...TTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS-3UTR GCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTCTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGCGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATACGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QLESAQLQYSIAVEWTCIRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...TATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATCGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp CTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACCTCTCTAATCTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: LESAQLQYSIAVEWTSLIWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...GATTAGAGAGGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639457.1
CDS-3UTR GCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCCTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFLVAKR*TCWMRH
Trigger: ATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAG...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATCTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNLVAKR*TCWMRH
Trigger: ATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAG...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACTTGTGGCCAAAAGGTaGACTTGCTGGATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLVAKR*TCWMRH
Trigger: ATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR GCA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCAGTTGAATGGACTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: GRCITNALYRSKSHMITEAVEWT*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAGTCCATTCAACTGC...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp AGGAAAGAGAGATCCTGCACTTCTGTAGCTCAGATCTCCGAGAATTTTATCTCCGCAGTTGAATGGACTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: RKERSCTSVAQISENFISAVEWT*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAGTCCATTCAACTGC...GGAGATAAAATTCTCGGAGATCTGAGCTACAGAAGTGCAGGATCTCTCTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR GCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTCCTAAAGAGATAATCTaGCTCCTATTGCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTPKEII*LLLPSA
Trigger: AGCTGAAGGCAATAGGAGGCAGATTATCTCTTTAGG...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp GGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCTACTTTTTCCAAGAAGTaGAAACCTGTTCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GLLSCQWLQQLYSLEKYATFSKK*KPVPWK
Trigger: TTTCCAAGGAACAGGTTTGCACTTCTTGGAAAAAGT...AGCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR GCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATTTCAGCCTCCCAAAGTaGTGGGATTATAGGCGCAAA +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHFSLPK*WDYRRK
Trigger: TTTGCGCCTATAATCCCAGCACTTTGGGAGGCTGAA...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp AAGTCTCTTTGTAGCTTGTTTTCTTGGTTTTCGGTAACTGATTTAGTCAGTCTTCCAATGTGGGGAACCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KSLCSLFSWFSVTDLVSLPMWGT*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGTTCCCCACATTGG...AAGACTGACTAAATCAGTTACCGAAAACCAAGAAAACAAGCTACAAAGAGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGATTGCTAAGCTGTCAATaGTTGCAGCAGCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGLLSCQ*LQQLYS
Trigger: GGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAA...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATTGCTAAGCTGTCAATaGTTGCAGCAGCTCTACTCC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTLLSCQ*LQQLYS
Trigger: GGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATATCAATTGCAGTTGAATaGACCTTTATAGACACACAT +
Preference number: 4 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLISIAVE*TFIDTH
Trigger: ATGTGTGTCTATAAAGGTCCATTCAACTGCAATTGA...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACCTTTTGAAATTACCCTaGTTTGGATTTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYLLKLP*FGFGQR
Trigger: CCTTTGCCCAAATCCAAACCAGGGTAATTTCAAAAG...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS-3UTR CCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATTTGCTAAGCTGTCAATaGTTGCAGCAGCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNLLSCQ*LQQLSL
Trigger: TAGAGAGAGCTGCTGCAACCATTGACAGCTTAGCAA...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638790.1
ENST00000639189.1
ENST00000639596.1
CDS-3UTR TCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ACCTTGATATATGCAGACCCCTCTAAATCACTAGGAATTTGGACATCAAGAGGATGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: TLIYADPSKSLGIWTSRGCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...TCCTCTTGATGTCCAAATTCCTAGTGATTTAGAGGGGTCTGCATATATCAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR TCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCTGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TCAATTGCAGTTGAATGGACCTCTCTAATCAGTAGATGCAAATTATGCTCTAGGACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SIAVEWTSLISRCKLCSRTCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...CCTAGAGCATAATTTGCATCTACTGATTAGAGAGGTCCATTCAACTGCAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639457.1
CDS-3UTR TCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR TCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGAAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR TCA 90 bp CCTCAAACCCATCACTTTCTATACTGCCCCTTGGACTTGAGATTAAACTACTTCCTCAAGGTCTGTTTATaGAACTCTCTAATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: PQTHHFLYCPLDLRLNYFLKVCL*NSLISR
Trigger: TCTACTGATTAGAGAGTTTCATAAACAGACCTTGAG...GAAGTAGTTTAATCTCAAGTCCAAGGGGCAGTATAGAAAGTGATGGGTTTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR TCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSIGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAGGTCCAAGTCCCACATaGTTACTGAAGCTCAGTACT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQGPSPT*LLKLST
Trigger: AGTACTGAGCTTCAGTAATCATGTGGGACTTGGACC...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp GCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATAGCTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: AQLQYSIAVEWTCIFVHSWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...GCTATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATATCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFISTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTTCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSISTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATCCACTGAACTTCTTTaGATGGCCCACGAAGATGAC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQSTELL*MAHEDD
Trigger: GTCATCTTCGTGGGCCATTCAAAGAAGTTCAGTGGA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCGAGAGCTTGCCTATATaGTACTACTTTCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFESLPI*YYFQCY
Trigger: GTAACACTGAAAGTAGTATCATATAGGCAAGCTCTC...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR GCA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATACTGTTTTGGAGGAAGTaGATCCTGAGAGACAGGATC +
Preference number: 4 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFILFWRK*ILRDRI
Trigger: GATCCTGTCTCTCAGGATGCACTTCCTCCAAAACAG...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATCGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCCGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: VITLPSLCTTRICSTPIFRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...GAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTASNFV*QCGEPG
Trigger: ACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR GCA 90 bp TGCACTTGCTGGATGAGGCATCATGATGGAACTCAAGGTCTGTTTATGAAACTCTCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: CTCWMRHHDGTQGLFMKLSLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...GAGTTTCATAAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639523.1
CDS-3UTR GCA 90 bp GTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: VITLPSLCTTRICSTPIFHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...GAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTAC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGA +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTKRCTC*MRHHDG
Trigger: TCCATCATGATGCCTCATCCAGCAAGTGCACCTTTT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAAGTCTCATTCTCTTGTaGCCAAAAGGTGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTSLILL*PKGALA
Trigger: AGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATAGTCTCATTCTCTTGTaGCCAAAAGGTGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHSLILL*PKGALA
Trigger: AGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACT...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CCA 90 bp CATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAAAGTCTCATTCTCTTGTaGCCAAAAGGTGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: HLYVQLESAQLQYSIAVESLILL*PKGALA
Trigger: AGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACT...TTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTTGGAAAGGCCTTAATTaGAGAAAGCAATCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVWKGLN*RKQSRA
Trigger: AGCCCTGGATTGCTTTCTCCAATTAAGGCCTTTCCA...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp CATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATTGCTAAGCTGTCAATaGTTGCAGCAGCTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: HLYVQLESAQLQYSIAVELLSCQ*LQQLSL
Trigger: TAGAGAGAGCTGCTGCAACCATTGACAGCTTAGCAA...TTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638790.1
ENST00000639189.1
ENST00000639596.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATTGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp GGACATCAAGAGGACAGTAATCTTCAGGTATCTTTTTATCCAGATCGAGATCTGAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: GHQEDSNLQVSFYPDRDLNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...CAGATCTCGATCTGGATAAAAAGATACCTGAAGATTACTGTCCTCTTGATGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR TCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR TCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAAAGCTCGGAAAGGGCTaGGAGATAATCTGGTTTTTC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQKLGKG*EIIWFF
Trigger: GAAAAACCAGATTATCTCTCAGCCCTTTCCGAGCTT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR TCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATGGTGCTGTGACATCTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQWCCDI*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATATGGTGCTGTGACATCTaGGACAGAAGAAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFIWCCDI*DRRKSC
Trigger: ACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCA...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSIWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATGGTTACGAGGAAACTaGACCATAATCTTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQWLRGN*TIILLP
Trigger: TGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTNGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATGCAGATTAGCCTATTaGCCAAGGCAAATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTCRLAY*PRQILQ
Trigger: CTGCAAAATTTGCCTTGGTCAATAGGCTAATCTGCA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATCGAAGTTTCCAGTGTTaGCGTAATCGCAAAAGCTCA +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNRSFQC*RNRKSS
Trigger: TGAGCTTTTGCGATTACGGCAACACTGGAAACTTCG...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAGCTTCTAATTTTGTCTaGCAATGTGGGGAACCTGGT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQASNFV*QCGEPG
Trigger: ACCAGGTTCCCCACATTGGCAGACAAAATTAGAAGC...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCGCAGTTGAATGGACTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSAVEWT*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAGTCCATTCAACTGC...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: ITNALYRSKSHMITEAQYCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCACCGTGATGGCAGATaGATTACCAATGCTCTCTAT +
Preference number: 4 (lower is better)
Translates to: ESAQLQYSIAVEWTCIFVHRDGR*ITNALY
Trigger: ATAGAGAGCATTGGTAATGCATCTGCCATCACGGTG...AACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACCTAAAGAGATAATCTaGCTCCTATTGCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTPKEII*LLLPSA
Trigger: AGCTGAAGGCAATAGGAGGCAGATTATCTCTTTAGG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATTTTGTCTGCCAATGTaGGGAACCTGGTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTFCLPM*GTWFGF
Trigger: AAATCCAAACCAGGTTCCCCACATTGGCAGACAAAA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTTTTTGTCTGCCAATGTaGGGAACCTGGTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVFCLPM*GTWFGF
Trigger: AAATCCAAACCAGGTTCCCCACATTGGCAGACAAAA...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR CCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQKRCTC*MRHHDG
Trigger: TCCATCATGATGCCTCATCCAGCAAGTGCACCTTTT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAAGTCTCATTCTCTTGTaGCCAAAAGGTGCACTTGCT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQSLILL*PKGALA
Trigger: AGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAATCAATTGCAACGTCTaGGGATTCTGTTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQINCNV*GFCFGG
Trigger: TCCTCCAAAACAGAATCCTCAGACGTTGCAATTGAT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTTGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATGCTGCTCCAGCAAGTaGCTTCTTTTTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTCCSSK*LLFRYQ
Trigger: TTGATATCTAAAAAGAAGTCACTTGCTGGAGCAGCA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGATTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTTTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTLVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAAGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: HLYVQLESAQLQYSIAVEAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...TTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AATTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: NFIFIKSLRTRKSHSLVAFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...GGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQTCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR TCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCACTTGTGATTTAATTTaGACAGCTTCCCGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFTCDLI*TASRES
Trigger: GCTCTCTCGGGAAGCTGTTCAAATTAAATCACAAGT...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AATTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: NFIFIKSLRTRKSHSLVANIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...GGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR TCA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR TCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTAATGGCCCACGAAGATaGCTCCATTTGTTATCTTGT +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSINGPRR*LHLLSC
Trigger: ACAAGATAACAAATGGAGTCATCTTCGTGGGCCATT...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTTGGTCCTCCGGACATTaGTTCTCAGTAGCAAATTTT +
Preference number: 4 (lower is better)
Translates to: ESAQLQYSIAVEWTCIFVWSSGH*FSVANF
Trigger: AAAATTTGCTACTGAGAAGCAATGTCCGGAGGACCA...AACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR GCA 90 bp TTATCTCCAACTTTTCGAAGTTTCCAGTGTTGCCGTAATCGCAAAAGCTCAGAATCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: LSPTFRSFQCCRNRKSSESLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...TTCTGAGCTTTTGCGATTACGGCAACACTGGAAACTTCGAAAAGTTGGAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR GCA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATGCAGTTGAATGGACTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNAVEWT*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAGTCCATTCAACTGC...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTTGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCACTTTTTCCAAGAAGTaGAAACCTGTTCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: TRAKCRHKQLHFINKISTTFSKK*KPVPWK
Trigger: TTTCCAAGGAACAGGTTTGCACTTCTTGGAAAAAGT...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATTCACAGAGAATCCTTaGCAAGTTCATACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQFTENP*QVHTAS
Trigger: GCTTGCTGTATGAACTTGGCAAGGATTCTCTGTGAA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAACTGCATGTACCTGGTaGTGTGACATTTGCATATTT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTTACTW*CDICIF
Trigger: AAATATGCAAATGTCACAGCACCAGGTACATGCAGT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533133.6
CDS-3UTR CCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATTTTGTCTGCCAATGTaGGGAACCTGGTTTGGATTT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQFCLPM*GTWFGF
Trigger: AAATCCAAACCAGGTTCCCCACATTGGCAGACAAAA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAAAAGTTGTTCTATCGTaGCCCACAAGCTCCATTTTT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTKVVLS*PTSSIF
Trigger: AAAAATGGAGCTTGTGGGCCACGATAGAACAACTTT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCTCAATTGCAGTTGAATaGACCTCTCTAATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCSIAVE*TSLISR
Trigger: TCTACTGATTAGAGAGGTCCATTCAACTGCAATTGA...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639457.1
CDS-3UTR TCA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATATTGGTTTTCGGTAACTaGTTTAGTCAGTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFILVFGN*FSQSFC
Trigger: GCAGAAAGACTGACTAAATCAGTTACCGAAAACCAA...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAGCAAAAGCTCAGAATTaGAGTCTCTTTGTAGCTTGT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQAKAQN*SLFVAC
Trigger: ACAAGCTACAAAGAGACTTCAATTCTGAGCTTTTGC...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR TCA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: AKCRHKQLHFINKISTFHNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR TCA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACCTCAAGGTCTGTTTATaGAACTCTCTAATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNLKVCL*NSLISR
Trigger: TCTACTGATTAGAGAGTTTCATAAACAGACCTTGAG...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000638487.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACTCAAGGTCTGTTTATaGAACTCTCTAATCAGTAGA +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTLKVCL*NSLISR
Trigger: TCTACTGATTAGAGAGTTTCATAAACAGACCTTGAG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATTTTTATCAAAAGCTTaGGGACCCGAAAGTCTCATT +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTFLSKA*GPESLI
Trigger: AATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGAAACATCATTGATATTTaGCCAATGAGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGNIIDI*PMSLYL
Trigger: CAGATACAGGCTCATTGGTCAAATATCAATGATGTT...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAGAGAGCTTGCCTATATaGTACTACTTTCAGTGTTAC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQESLPI*YYFQCY
Trigger: GTAACACTGAAAGTAGTATCATATAGGCAAGCTCTC...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR TCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAATATTCAATTGCAGTTaGATGGACCTACTCCTTAGA +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTIFNCS*MDLLLR
Trigger: TCTAAGGAGTAGGTCCATTCAACTGCAATTGAATAT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640521.1
CDS-3UTR GCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGTCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLSLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR GCA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGCAGTTGAATGGACTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVAVEWT*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAGTCCATTCAACTGC...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCTGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGTGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp TTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAATGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: FHFYQKLEDPKVSFSCGQCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...TTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR GCA 90 bp ATGTTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACACTTTTTCCAAGAAGTaGAAACCTGTTCCTTGGAAA +
Preference number: 4 (lower is better)
Translates to: MFLNYLCRLDPGKLKGDNTFSKK*KPVPWK
Trigger: TTTCCAAGGAACAGGTTTGCACTTCTTGGAAAAAGT...GTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAACAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATCAAACACAGCTCCTTaGCAACCTGTTAATACTTGT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQSNTAP*QPVNTC
Trigger: ACAAGTATTAACAGGTTGGCAAGGAGCTGTGTTTGA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR TCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATTTGTATTGAAACCTTaGTATATGCAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQFVLKP*YMQTPL
Trigger: TAGAGGGGTCTGCATATATCAAGGTTTCAATACAAA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR TCA 90 bp GAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ESAQLQYSIAVEWTCIFVNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...AACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR TCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAAATGTGAGGGACTTGTaGTTTAATTTGAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQNVRDL*FNLNSF
Trigger: GAAGCTGTTCAAATTAAATCACAAGTCCCTCACATT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTSLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR GCA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATGCAGTTGAATGGACTTaGATATTTGTTCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNAVEWT*IFVHSL
Trigger: AAGGCTATGAACAAATATGCAAGTCCATTCAACTGC...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR GCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATTGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR GCA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATCTTATAAGGAGAGCTTaGCTATATGATACTACTTTC +
Preference number: 4 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNLIRRA*LYDTTF
Trigger: GAAAGTAGTATCATATAGGCAAGCTCTCCTTATAAG...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACTTAAAGGAGACAACTaGAGGAAGAGGTTATCAATA +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLKGDN*RKRLSI
Trigger: TATTGATAACCTCTTCCTCCAGTTGTCTCCTTTAAG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATACTTAAAGGAGACAACTaGAGGAAGAGGTTATCAATA +
Preference number: 4 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFILKGDN*RKRLSI
Trigger: TATTGATAACCTCTTCCTCCAGTTGTCTCCTTTAAG...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CCA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATCAATTGCAGTTGAATaGACCTACTCCTTAGAAAAA +
Preference number: 4 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTSIAVE*TYSLEK
Trigger: TTTTTCTAAGGAGTAGGTCCATTCAACTGCAATTGA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640521.1
CDS-3UTR GCA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTTCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: LLFHLYVQLESAQLQYSISLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR GCA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCTCTCTAATCAGTAGATaGAAATTATGCTCTAGGACA +
Preference number: 4 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFSLISR*KLCSRT
Trigger: TGTCCTAGAGCATAATTTGCATCTACTGATTAGAGA...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR GCA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATGTACAACTCGAATCTaGTCAACTCCAATATTCAAT +
Preference number: 4 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQCTTRI*STPIFN
Trigger: ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS TCA 90 bp CCAGGCCCACCTCATGGACCTGCTTCTCGCAGGCCGATTCGATGCTaGTCCGCACTGCGCGCACCCCGGACATGCTGGCTGCGTCGGCCA +
Preference number: 5 (lower is better)
Translates to: PGPPHGPASRRPIRC*SALRAPRTCWLRRP
Trigger: TGGCCGACGCAGCCAGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640583.1
ENST00000640804.1
CDS GCA 90 bp CTCATGGACCTGCTTCTCGCAGGCCGATTCGATGCTGATCCGCACTaGGCGCACCCCGGACATGCTGGCTGCGTCGGCCAGCGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: LMDLLLAGRFDADPH*AHPGHAGCVGQRWE
Trigger: CTCCCACCGCTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCTGCGAGAAGCAGGTCCATGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 90 bp GCCTCCTCCTCCTCGGAGCCCGAACCCTGGCTGAAGTCTATCCGCTaGGCCAGACGCGCCAGATTCTGCGACATGGACAGCGGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ASSSSEPEPWLKSIR*ARRARFCDMDSGGR
Trigger: CCTGCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCTGGCCCAGCGGATAGACTTCAGCCAGGGTTCGGGCTCCGAGGAGGAGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000528786.2
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS GCA 90 bp GGCTTCCCTGCGGAGAGCCGGGAACTCAGAAGCCCGCAGCCGCGGTaGCTCAGAAGACCCTCGGGAAACCGAACGCAACGCTCAGACTGG +
Preference number: 5 (lower is better)
Translates to: GFPAESRELRSPQPR*LRRPSGNRTQRSDW
Trigger: CCAGTCTGAGCGTTGCGTTCGGTTTCCCGAGGGTCTTCTGAGGCACCGCGGCTGCGGGCTTCTGAGTTCCCGGCTCTCCGCAGGGAAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000251871.9
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640473.1
ENST00000640583.1
ENST00000640804.1
CDS GCA 90 bp GGGGGCAGGTACGTCTCGGTGCCATCCAGGCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCGATGCTGATCCGCACTGCGCGCACC +
Preference number: 5 (lower is better)
Translates to: GGRYVSVPSRPTSWT*FSQADSMLIRTART
Trigger: GGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 90 bp GACAGCGGGGGCAGGTACGTCTCGGTGCCATCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCCGATTCGATGCTGATCCGCACTGCG +
Preference number: 5 (lower is better)
Translates to: DSGGRYVSVPSRPTS*TCFSQADSMLIRTA
Trigger: CGCAGTGCGGATCAGCATCGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGCCCCCGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS GCA 90 bp GCGCCAGATTCTGCGACATGGACAGCGGGGGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCATGGACCTGCTTCTCGCAGGCCGATT +
Preference number: 5 (lower is better)
Translates to: APDSATWTAGAGTSR*HPGPPHGPASRRPI
Trigger: AATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS GCA 90 bp GAACCCTGGCTGAAGTCTATCCGCTGGGCCAGACGCGCCAGATTCTaGGACATGGACAGCGGGGGCAGGTACGTCTCGGTGCCATCCAGG +
Preference number: 5 (lower is better)
Translates to: EPWLKSIRWARRARF*DMDSGGRYVSVPSR
Trigger: CCTGGATGGCACCGAGACGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCTGGCCCAGCGGATAGACTTCAGCCAGGGTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000528786.2
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 90 bp AACGCACCGCAAGCTCCCTCCTCGGTAAGTCTTTCGGAGCAAAACTaGGCAGGCGCGGAAGCTCCAGGGTTCCCTAGAGCGCTTCCGGTG +
Preference number: 5 (lower is better)
Translates to: NAPQAPSSVSLSEQN*AGAEAPGFPRALPV
Trigger: CACCGGAAGCGCTCTAGGGAACCCTGGAGCTTCCGCGCCTGCCCAGTTTTGCTCCGAAAGACTTACCGAGGAGGGAGCTTGCGGTGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640583.1
ENST00000640804.1
CDS CCA 90 bp CCCTCGGGAAACCGAACGCAACGCTCAGACTGGAAACAAAGGAGCTaGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTCCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: PSGNRTQRSDWKQRS*PSNFPRTHRKLPPR
Trigger: CCGAGGAGGGAGCTTGCGGTGCGTTCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGTTCGGTTTCCCGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000251871.9
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639596.1
ENST00000640027.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 90 bp CGGTGCCTCAGAAGACCCTCGGGAAACCGAACGCAACGCTCAGACTaGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGAACGCACCGC +
Preference number: 5 (lower is better)
Translates to: RCLRRPSGNRTQRSD*KQRSWPSNFPRTHR
Trigger: GCGGTGCGTTCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGTTCGGTTTCCCGAGGGTCTTCTGAGGCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000251871.9
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640583.1
ENST00000640804.1
CDS-3UTR CAA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACGTGGGGAACCTGAGGTaGGGTGTTCGAGACCAGCCT +
Preference number: 5 (lower is better)
Translates to: GHRDGRCITNALYRSKSHVGNLR*GVRDQP
Trigger: AGGCTGGTCTCGAACACCCAACCTCAGGTTCCCCAC...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR CAA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCCATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGATTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: PATRKAETEGSPKPGRSRLGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTTGTGGGGAACCTGGTTaGGATTTGGGCAAAGGTCGT +
Preference number: 5 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTCGEPG*DLGKGR
Trigger: ACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACA...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000639189.1
CDS-3UTR CAA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: GHRDGRCITNALYRSKSHTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGAAGGGCACTTCTCAAATaGTTCCTCACTGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: PATRKAETEGSPKPGRSRRALLK*FLTESQ
Trigger: TTGGGACTCAGTGAGGAACAATTTGAGAAGTGCCCT...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACCATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: GHRDGRCITNALYRSKSHHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCCATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: EATVMADALPMLSIGPSPHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACAACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: ATVMADALPMLSIGPSPTTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AGGCTGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCATAATCTGCCTCCTATaGCCTTCAGCTGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: RLENPRWKAGHEPYTRCLIICLL*PSAVLS
Trigger: AGAAAGGACAGCTGAAGGCAATAGGAGGCAGATTAT...GAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCAGGGCACTTCTCAAATaGTTCCTCACTGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: GGHRDGRCITNALYRSKSRALLK*FLTESQ
Trigger: TTGGGACTCAGTGAGGAACAATTTGAGAAGTGCCCT...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CAA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTTCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTSEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp GGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: GKGRLKRLTVPRSPISGALGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...GGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CAA 90 bp GAACCTGGTTTGGATTTGGGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTGTGGGGAACCTGGTTaGGATTTGGGCAAAGGTCGT +
Preference number: 5 (lower is better)
Translates to: EPGLDLGKGRLKRLTVPRCGEPG*DLGKGR
Trigger: ACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACA...CCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CAA 90 bp GGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTGGTGAGGTCAATGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: GGRLGMSHTLGVSTGEVNVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...ATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: GGHRDGRCITNALYRSKSVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CAA 90 bp GGAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: GGHRDGRCITNALYRSKSDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...GGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTCC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTGACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: KLEDPKVSFSCGQKVHLLTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...CAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTACCCTGGTTTGGATTaGGGCAAAGGTCGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GHRDGRCITNALYRSKSHYPGLD*GKGRLK
Trigger: CTTCAAACGACCTTTGCCCAAATCCAAACCAGGGTA...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS TCA 90 bp CAAACTCCCAATGGTCCCTTCTCATTCAAAGCAGCAGAAAGTACCTaGAATAGCATAGTCACCACTTGGGGAGGCCACCGTGATGGCAGA +
Preference number: 5 (lower is better)
Translates to: QTPNGPFSFKAAEST*NSIVTTWGGHRDGR
Trigger: TCTGCCATCACGGTGGCCTCCCCAAGTGGTGACTATGCTATTTCAGGTACTTTCTGCTGCTTTGAATGAGAAGGGACCATTGGGAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640411.1
CDS-3UTR CAA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: HMITEAQYLPAHNLGELLLGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GGCAAAGGTCGTTTGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCGAACCTGGTTTGGATTaGGGCAAAGGTCGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GKGRLKRLTVPRSPISGAEPGLD*GKGRLK
Trigger: CTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTC...GGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CAA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATTGTGGGGAACCTGGTTaGGATTTGGGCAAAGGTCGT +
Preference number: 5 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHCGEPG*DLGKGR
Trigger: ACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACA...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CAA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCCATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGCATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: HMITEAQYLPAHNLGELLHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: KSLRTRKSHSLVAKRCTCTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...GCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AGGCAGAGGCAGGTAGATCACTTGAGCCGAGTTCGAAACCAGCCTGGGCAACATGTGCAGATTAGCCTATaGACCAAGGCAAATTTTGCA +
Preference number: 5 (lower is better)
Translates to: RQRQVDHLSRVRNQPGQHVQISL*TKANFA
Trigger: TGCAAAATTTGCCTTGGTCAATAGGCTAATCTGCAC...ATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CAA 90 bp CCAGCTACTCGGAAGGCTGAGACAGAAGGATCACCTAAGCCTGGGAGGTCAAGAGGTTATCCCTTTGATTaGATGGTGTTCCAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: PATRKAETEGSPKPGRSRGYPFD*MVFQQR
Trigger: TCTTTGCTGGAACACCATCAAATCAAAGGGATAACC...TCTTGACCTCCCAGGCTTAGGTGATCCTTCTGTCTCAGCCTTCCGAGTAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CAA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: VTSETEENPVAPAPDKTVTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: AELHVPGAVTSETEENPVTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGCTAAGCTGTCAATGGTaGCAGCAGCTCTCTCTAATC +
Preference number: 5 (lower is better)
Translates to: HMITEAQYLPAHNLGELLLSCQW*QQLSLI
Trigger: GATTAGAGAGAGCTGCTGCAACCATTGACAGCTTAG...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638790.1
ENST00000639189.1
CDS-3UTR CAA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCTCTCTAGACCTCCCATaGATTCTGGGACCTACTCAA +
Preference number: 5 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCSLDLP*ILGPTQ
Trigger: TTGAGTAGGTCCCAGAATCAATGGGAGGTCTAGAGA...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CAA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCTGCCAAAGCTAAAGTaGCCTGATACTTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ALYRSKSHMITEAQYLPALPKLK*PDTCFS
Trigger: GGAGAAGCAAGTATCAGGCAACTTTAGCTTTGGCAG...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS TCA 90 bp GAGAACACACATCTCTGTCAGGGCACTTCTCAAATTGTTCCTCACTaGGTCCCAAGGCCAAAGGGAAGGCTGAAATTTTACCACTCCTTC +
Preference number: 5 (lower is better)
Translates to: ENTHLCQGTSQIVPH*VPRPKGRLKFYHSF
Trigger: GAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCCTTGGGACTCAGTGAGGAACAATTTGAGAAGTGCCCTGACAGAGATGTGTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS-3UTR CAA 90 bp CCTCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAATCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: PQFGLLSCQWLQQLYSLESEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...TTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TTGACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: LTNEPVSEDPQFGLLSCQLGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...TTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: GRCITNALYRSKSHMITETEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGGTGGGGAACCTGAGGTaGGGTGTTCGAGACCAGCCT +
Preference number: 5 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQVGNLR*GVRDQP
Trigger: AGGCTGGTCTCGAACACCCAACCTCAGGTTCCCCAC...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
CDS-3UTR CAA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCATCCATTTGCAAGCCTaGTTCTCTAGACCTCCCATT +
Preference number: 5 (lower is better)
Translates to: ALYRSKSHMITEAQYLPAIHLQA*FSRPPI
Trigger: AATGGGAGGTCTAGAGAACAAGGCTTGCAAATGGAT...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS GCA 90 bp TCTACCCAGAAGCATTTGAAGCGACCACAGCTTGCCAGCAGACCATaGAACTGTCTATATAGCAGCAGAATACCTTTGTTGCAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: STQKHLKRPQLASRP*NCLYSSRIPLLQGD
Trigger: ATCTCCTTGCAACAAAGGTATTCTGCTGCTATATAGACAGTTGCATGGTCTGCTGGCAAGCTGTGGTCGCTTCAAATGCTTCTGGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS-3UTR CAA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGAGGGCACTTCTCAAATaGTTCCTCACTGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: VTSETEENPVAPAPDKTVRALLK*FLTESQ
Trigger: TTGGGACTCAGTGAGGAACAATTTGAGAAGTGCCCT...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
CDS-3UTR CAA 90 bp GGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: GHRDGRCITNALYRSKSHFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...GTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCATTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: NALYRSKSHMITEAQYLPLGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GAGGCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: EATVMADALPMLSIGPSPIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...GGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GCTGAACTGCATGTACCTGGTGCTGTGACATCTGAGACAGAAGAAAATCCTGTAGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: AELHVPGAVTSETEENPVDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...TACAGGATTTTCTTCTGTCTCAGATGTCACAGCACCAGGTACATGCAGTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TTGACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAAGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: LTNEPVSEDPQFGLLSCQDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...TTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGTCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR CAA 90 bp CACATGATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGTGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 5 (lower is better)
Translates to: HMITEAQYLPAHNLGELLWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...CAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp ACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTTGCTAAGCTGTCAATGGATAATCTGCCTCCTATaGCCTTCAGCTGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: TNEPVSEDPQFGLLSCQWIICLL*PSAVLS
Trigger: AGAAAGGACAGCTGAAGGCAATAGGAGGCAGATTAT...CCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638487.1
CDS-3UTR CAA 90 bp TGGAGAATCCCAGGTGGAAGGCTGGGCATGAGCCATACACTAGGTGTCTCAACTCAGTCATCTTACAAATaGTTAAAGCAGGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: WRIPGGRLGMSHTLGVSTQSSYK*LKQDVC
Trigger: ACAGACATCCTGCTTTAACAATTTGTAAGATGACTG...AGTTGAGACACCTAGTGTATGGCTCATGCCCAGCCTTCCACCTGGGATTCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS CCA 90 bp AGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCACTTGCTaGATGAGGCATCATGATGGAACTCAAGGTCTGTTTATGAAACTT +
Preference number: 5 (lower is better)
Translates to: RTRKSHSLVAKRCTC*MRHHDGTQGLFMKL
Trigger: AAGTTTCATAAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640473.1
CDS CCA 90 bp TATATAGCAGCAGAATACCTTTGTTGCAAGGAGATGAGATCCAATTaGGTATATGTGGGCCCTGCCCTAACAGGAGCCATAAGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: YIAAEYLCCKEMRSN*VYVGPALTGAISFC
Trigger: ACAGAAGCTTATGGCTCCTGTTAGGGCAGGGCCCACATATACCCAATTGGATCTCATCTCCTTGCAACAAAGGTATTCTGCTGCTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS-3UTR CAA 90 bp GGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAAGGGCACTTCTCAAATaGTTCCTCACTGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: GRCITNALYRSKSHMITERALLK*FLTESQ
Trigger: TTGGGACTCAGTGAGGAACAATTTGAGAAGTGCCCT...TTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CAA 90 bp GCCACCGTGATGGCAGATGCATTACCAATGCTCTCTATAGGTCCAAGTCCCACATTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: ATVMADALPMLSIGPSPTFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...TGTGGGACTTGGACCTATAGAGAGCATTGGTAATGCATCTGCCATCACGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CCCAAGGCCAAAGGGAAGGCTGAAATTTTACCACTCCTTGTCCGGCAGCAACAATTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: PKAKGKAEILPLLVRQQQFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...TTGTTGCTGCCGGACAAGGAGTGGTAAAATTTCAGCCTTCCCTTTGGCCTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR CAA 90 bp GGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATATGCTGAACCTGGTTTGGATTaGGGCAAAGGTCGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: GLLSCQWLQQLYSLEKYAEPGLD*GKGRLK
Trigger: CTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTC...AGCATATTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR CAA 90 bp CCTATATCTGGAGCCTGTTTTTGTATTGAAACCTTGATATATGCAGACCCCTCTTGTGGGGAACCTGGTTaGGATTTGGGCAAAGGTCGT +
Preference number: 5 (lower is better)
Translates to: PISGACFCIETLIYADPSCGEPG*DLGKGR
Trigger: ACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACA...AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAAACAGGCTCCAGATATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CAA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCTGTGGGGAACCTGGTTaGGATTTGGGCAAAGGTCGT +
Preference number: 5 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFCGEPG*DLGKGR
Trigger: ACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACA...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CAA 90 bp TGCACTTGCTGGATGAGGCATCATGATGGAACTCAAGGTCTGTTTATGAAACTCGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: CTCWMRHHDGTQGLFMKLVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...GAGTTTCATAAACAGACCTTGAGTTCCATCATGATGCCTCATCCAGCAAGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639523.1
CDS-3UTR CAA 90 bp TCAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: SIRLAKLSMVAAALLLRKDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...TTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR CAA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACCATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: ITNALYRSKSHMITEAQYHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp TTAGGTCGGTACTGGCTACTCACTACAGCGACGTACCAAACAGGGAAAGTAAGATGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 5 (lower is better)
Translates to: LGRYWLLTTATYQTGKVRWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...TCTTACTTTCCCTGTTTGGTACGTCGCTGTAGTGAGTAGCCAGTACCGACCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CAA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATAGTGGGGAACCTGAGGTaGGGTGTTCGAGACCAGCCT +
Preference number: 5 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFIVGNLR*GVRDQP
Trigger: AGGCTGGTCTCGAACACCCAACCTCAGGTTCCCCAC...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000638790.1
CDS-3UTR CAA 90 bp GAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCAACTGAACCAGGTTTaGGGGTGGGGCAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: ESAQLQYSIAVEWTCIFVQLNQV*GWGKGG
Trigger: GCCTCCCTTGCCCCACCCCAAAACCTGGTTCAGTTG...AACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS-3UTR CAA 90 bp GCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: ALYRSKSHMITEAQYLPAFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...GGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp ATTACTGAAGCTCAGTACTTGCCAGCCCATAACCTTGGCGAGTTGCTGAACTGCTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: ITEAQYLPAHNLGELLNCFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...GCAGTTCAGCAACTCGCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFLGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: ITNALYRSKSHMITEAQYVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
CDS-3UTR CAA 90 bp CTCCTGCTCCTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: LLLLIRQCNYSSISMYNSDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...CGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAGGAGCAGGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AGGAGAGCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: RRACLYDTTFSVTKRLMSHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...GCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: TRAKCRHKQLHFINKISTTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TTAGGTCGGTACTGGCTACTCACTACAGCGACGTACCAAACAGGGAAAGTAAGACTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: LGRYWLLTTATYQTGKVRLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...TCTTACTTTCCCTGTTTGGTACGTCGCTGTAGTGAGTAGCCAGTACCGACCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CAA 90 bp CTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAGCCCATCTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: LYRSKSHMITEAQYLPAHLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...ATGGGCTGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCLGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNLGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATGTGGGGAACCTGGTTaGGATTTGGGCAAAGGTCGT +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTCGEPG*DLGKGR
Trigger: ACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CAA 90 bp CCTATATCTGGAGCCTGTTTTTGTATTGAAACCTTGATATATGCAGACCCCTCTGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: PISGACFCIETLIYADPSDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAAACAGGCTCCAGATATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR CAA 90 bp GCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATAGCACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: AQLQYSIAVEWTCIFVHSTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...GCTATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAACTGAAGCTCAGTACTaGCCAGCCCATAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTTEAQY*PAHNLG
Trigger: GCCAAGGTTATGGGCTGGCAAGTACTGAGCTTCAGT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp CAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 5 (lower is better)
Translates to: QFGLLSCQWLQQLYSLEKWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...TTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCAGCAGCTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTCSSSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAGCTGCTGCA...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638518.1
CDS-3UTR CAA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: TRAKCRHKQLHFINKISTSEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQSEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GTGACATCTGAGACAGAAGAAAATCCTGTAGCTCCTGCTCCTGATAAGACAGTGCTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: VTSETEENPVAPAPDKTVLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...CACTGTCTTATCAGGAGCAGGAGCTACAGGATTTTCTTCTGTCTCAGATGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp ACTGCCTACCTTATTTTCTGCCCTGGGAGGCTGACACACGTGGTTACATTAATACTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: TAYLIFCPGRLTHVVTLILFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...TATTAATGTAACCACGTGTGTCAGCCTCCCAGGGCAGAAAATAAGGTAGGCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CAA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCGAACCTGGTTTGGATTaGGGCAAAGGTCGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: TRAKCRHKQLHFINKISTEPGLD*GKGRLK
Trigger: CTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTC...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CAA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATATGTGGGGAACCTGGTTaGGATTTGGGCAAAGGTCGT +
Preference number: 5 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFICGEPG*DLGKGR
Trigger: ACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACA...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR CAA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGTGGGGAACCTGGTTaGGATTTGGGCAAAGGTCGT +
Preference number: 5 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNCGEPG*DLGKGR
Trigger: ACGACCTTTGCCCAAATCCAAACCAGGTTCCCCACA...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR CAA 90 bp CAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATAGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: QLESAQLQYSIAVEWTCIVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...TATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR CAA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR CAA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CAA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTCATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CCACACATTTGCTTTAGTTTCTACAATTCTTTAGGTCGGTACTGGCTACTCACTATAATCTGCCTCCTATaGCCTTCAGCTGTCCTTTCT +
Preference number: 5 (lower is better)
Translates to: PHICFSFYNSLGRYWLLTIICLL*PSAVLS
Trigger: AGAAAGGACAGCTGAAGGCAATAGGAGGCAGATTAT...AGTGAGTAGCCAGTACCGACCTAAAGAATTGTAGAAACTAAAGCAAATGTGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251871.9
CDS-3UTR CAA 90 bp TTCTTAAATTACCTATGTAGGTTAGACCCAGGAAAGCTTAAAGGAGACAACTGGCTAAGCTGTCAATGGTaGCAGCAGCTCTCTCTAATC +
Preference number: 5 (lower is better)
Translates to: FLNYLCRLDPGKLKGDNWLSCQW*QQLSLI
Trigger: GATTAGAGAGAGCTGCTGCAACCATTGACAGCTTAG...CCAGTTGTCTCCTTTAAGCTTTCCTGGGTCTAACCTACATAGGTAATTTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639189.1
CDS-3UTR CAA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCCTAAGCTGTCAATGGTaGCAGCAGCTCTCTCTAATC +
Preference number: 5 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLLSCQW*QQLSLI
Trigger: GATTAGAGAGAGCTGCTGCAACCATTGACAGCTTAG...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000638790.1
ENST00000639189.1
ENST00000639596.1
CDS-3UTR CAA 90 bp AATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTGCCAAATTTAGAATGCATTTaGTCACCAGTGCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: NALYRSKSHMITEAQYLPNLECI*SPVLKA
Trigger: TGCCTTCAGCACTGGTGACAAAATGCATTCTAAATT...TGGCAAGTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS GCA 90 bp CCTAGATGTGCATGTAGTAGGCTGTACCATCTAGGGCTGTGTAAGTaGACTCTATTATCATACGATGAAATCCTCTTAACAACACATTTC +
Preference number: 5 (lower is better)
Translates to: PRCACSRLYHLGLCK*TLLSYDEILLTTHF
Trigger: GAAATGTGTTGTTAAGAGGATTTCATCGTATGATAATAGAGTGCACTTACACAGCCCTAGATGGTACAGCCTACTACATGCACATCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640411.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAAGGGCACTTCTCAAATaGTTCCTCACTGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTRALLK*FLTESQ
Trigger: TTGGGACTCAGTGAGGAACAATTTGAGAAGTGCCCT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CAA 90 bp TTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTTCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: FHLYVQLESAQLQYSIAVSEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...AACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCTCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: VITLPSLCTTRICSTPIFSEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...GAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: HLYVQLESAQLQYSIAVESEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...TTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CATAAGAGAACATTCTGTGCCGCTTCTAATTTTGTCTGCCAATGTGGGGAACCTCTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: HKRTFCAASNFVCQCGEPLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...AGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
CDS-3UTR CAA 90 bp CATAAGAGAACATTCTGTGCCGCTTCTAATTTTGTCTGCCAATGTGGGGAACCTTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: HKRTFCAASNFVCQCGEPFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...AGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639457.1
ENST00000639523.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp TTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCG +
Preference number: 5 (lower is better)
Translates to: LLFHLYVQLESAQLQYSILGKGR*KRLTVP
Trigger: CGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAA...AATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGAACCTGGTTTGGATTaGGGCAAAGGTCGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTEPGLD*GKGRLK
Trigger: CTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CAA 90 bp GCTTGCCTATATGATACTACTTTCAGTGTTACCAAAAGGCTTATGAGCCTAAATGAACCTGGTTTGGATTaGGGCAAAGGTCGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: ACLYDTTFSVTKRLMSLNEPGLD*GKGRLK
Trigger: CTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTC...ATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATATAGGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000251871.9
ENST00000639189.1
CDS-3UTR CAA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: AKCRHKQLHFINKISTFHVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CAA 90 bp TTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAAAGGTGCATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: FIKSLRTRKSHSLVAKRCIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...GCACCTTTTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATAGCGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: AQLQYSIAVEWTCIFVHSDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...GCTATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTG +
Preference number: 5 (lower is better)
Translates to: YVQLESAQLQYSIAVEWTDPQFG*LSCQWL
Trigger: CAACCATTGACAGCTTAGCAAGCCGAATTGAGGATC...AGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCATACATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: LLNSNIQLQLNGLAYLFIHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...TATGAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638518.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACATAACCTTGGCGAGTaGCTGAACTGCATGTACCTG +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQHNLGE*LNCMYL
Trigger: CAGGTACATGCAGTTCAGCAACTCGCCAAGGTTATG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp TTGATATATGCAGACCCCTCTAAATCACTAGGAATTTGGACATCAAGAGGACAGTGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 5 (lower is better)
Translates to: LIYADPSKSLGIWTSRGQWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...CTGTCCTCTTGATGTCCAAATTCCTAGTGATTTAGAGGGGTCTGCATATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR CAA 90 bp CAATTCGGCTTGCTAAGCTGTCAATGGTTGCAGCAGCTCTACTCCTTAGAAAAATTAGTCAAAACATGGTaGACAGAAACACTGAAAGGA +
Preference number: 5 (lower is better)
Translates to: QFGLLSCQWLQQLYSLEKLVKTW*TETLKG
Trigger: TCCTTTCAGTGTTTCTGTCAACCATGTTTTGACTAA...TTTTTCTAAGGAGTAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAAAAAGAGATGGTATCTaGCTCTGTCACCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQKRDGI*LCHPGL
Trigger: CAGCCCAGGGTGACAGAGCAAGATACCATCTCTTTT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATTACATCCTCTGGCTTaGGGCTGGGTTCAGGTAATG +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLHPLA*GWVQVM
Trigger: CATTACCTGAACCCAGCCCAAAGCCAGAGGATGTAA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS TCA 90 bp AAAACATCACTTTTTGGAAGGTCTTTACATTGGTTACGAGGAAACTaGACCATAATCTTGCTGCCACTTTCAGGTCCATTACGAACTGTG +
Preference number: 5 (lower is better)
Translates to: KTSLFGRSLHWLRGN*TIILLPLSGPLRTV
Trigger: CACAGTTCGTAATGGACCTGAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCAAAAAGTGATGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640411.1
CDS-3UTR CAA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCTCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFSEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATCTGAGGATTCTGTTTaGGAGGAAGTGCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQSEDSV*EEVHPE
Trigger: CTCAGGATGCACTTCCTCCAAAACAGAATCCTCAGA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACCTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: ITNALYRSKSHMITEAQYLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CCAACTTTTCGAAGTTTCCAGTGTTGCCGTAATCGCAAAAGCTCAGAATTGAAGTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: PTFRSFQCCRNRKSSELKFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...CTTCAATTCTGAGCTTTTGCGATTACGGCAACACTGGAAACTTCGAAAAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000528786.2
ENST00000639523.1
CDS-3UTR CAA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: ITNALYRSKSHMITEAQYFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATGAACCTGGTTTGGATTaGGGCAAAGGTCGTTTGAAG +
Preference number: 5 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNEPGLD*GKGRLK
Trigger: CTTCAAACGACCTTTGCCCAAATCCAAACCAGGTTC...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAGTGGTCCTCCGGACATaGCTTCTCAGTAGCAAATTT +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQVVLRT*LLSSKF
Trigger: AAATTTGCTACTGAGAAGCAATGTCCGGAGGACCAC...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640521.1
CDS-3UTR CAA 90 bp ATTACCAATGCTCTCTATAGGTCCAAGTCCCACATGATTACTGAAGCTCAGTACATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: ITNALYRSKSHMITEAQYIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...GTACTGAGCTTCAGTAATCATGTGGGACTTGGACCTATAGAGAGCATTGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp ACAAGGGCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCAAATTTTACCACTCCTaGTCCGGCAGCAACAAAAAG +
Preference number: 5 (lower is better)
Translates to: TRAKCRHKQLHFINKISTKFYHS*SGSNKK
Trigger: CTTTTTGTTGCTGCCGGACAAGGAGTGGTAAAATTT...GGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGCCCTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS-3UTR CAA 90 bp AAGGTCTTTACATTGGTTACGAGGAAACTGAACCATAATCTTGCTGCCACTTTCCTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: KVFTLVTRKLNHNLAATFLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...GAAAGTGGCAGCAAGATTATGGTTCAGTTTCCTCGTAACCAATGTAAAGACCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATTGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 5 (lower is better)
Translates to: AKCRHKQLHFINKISTFHWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAACTCCAATATTCAATaGCAGTTGAATGGACCTCTC +
Preference number: 5 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLNSNIQ*QLNGPL
Trigger: GAGAGGTCCATTCAACTGCAATTGAATATTGGAGTT...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639457.1
CDS-3UTR CAA 90 bp CAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATGAAAGGGCTAGAAATTaGTCTGATGTCACAAAGCAA +
Preference number: 5 (lower is better)
Translates to: QCNYSSISMYNSNLLNSNERARN*SDVTKQ
Trigger: TTGCTTTGTGACATCAGACAAATTTCTAGCCCTTTC...ATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS-3UTR CAA 90 bp CTGATAAGACAGTGTAATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCTTCTCATACCTAGCTTaGATCCCTATCCATTTGCAA +
Preference number: 5 (lower is better)
Translates to: LIRQCNYSSISMYNSNLLFSYLA*IPIHLQ
Trigger: TTGCAAATGGATAGGGATCAAAGCTAGGTATGAGAA...GAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAATTACACTGTCTTATCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640027.1
CDS CCA 90 bp AGGACAGAACAGATTCCACAGTATAGTTTGTGTTACATGCTTTACTaGCTGTCACTATGGATAGCACACTATTTCTTTGCTCTCATTATT +
Preference number: 5 (lower is better)
Translates to: RTEQIPQYSLCYMLY*LSLWIAHYFFALII
Trigger: AATAATGAGAGCAAAGAAATAGTGTGCTATCCATAGTGACAGCCAGTAAAGCATGTAACACAAACTATACTGTGGAATCTGTTCTGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507258.4
CDS-3UTR CAA 90 bp ACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCCTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: TLPSLCTTRICSTPIFNCLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...GCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAACTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: FHFYQKLEDPKVSFSCGQLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...TTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: SISMYNSNLLNSNIQLQLIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...CAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp TTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCAAATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: FHFYQKLEDPKVSFSCGQIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...TTGGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
ENST00000640473.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAATGGAAGGTCTTTACATaGGTTACGAGGAAACTGAAC +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQWKVFT*VTRKLN
Trigger: GTTCAGTTTCCTCGTAACCAATGTAAAGACCTTCCA...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp TCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGCAGTCATCTTACAAATaGTTAAAGCAGGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: SSISMYNSNLLNSNIQLQQSSYK*LKQDVC
Trigger: ACAGACATCCTGCTTTAACAATTTGTAAGATGACTG...CTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp AATTTCATTTTTATCAAAAGCTTGAGGACCCGAAAGTCTCATTCTCTTGTGGCCTCACAGGATATTCTTTaGAAATTACCCTGGTTTGGA +
Preference number: 5 (lower is better)
Translates to: NFIFIKSLRTRKSHSLVASQDIL*KLPWFG
Trigger: TCCAAACCAGGGTAATTTCAAAAGAATATCCTGTGA...GGCCACAAGAGAATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAATGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS CCA 90 bp GTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATaGACCTTTATAGACACACATATTGCATATTTGTTCATAGCCTTG +
Preference number: 5 (lower is better)
Translates to: VQLESAQLQYSIAVE*TFIDTHIAYLFIAL
Trigger: CAAGGCTATGAACAAATATGCAATATGTGTGTCTATAAAGGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525026.6
ENST00000640027.1
CDS-3UTR CAA 90 bp GCTAAGTGCAGACATAAGCAGCTCCATTTTATAAACAAAATTTCGACCTTCCATCTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: AKCRHKQLHFINKISTFHLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...ATGGAAGGTCGAAATTTTGTTTATAAAATGGAGCTGCTTATGTCTGCACTTAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000533133.6
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACATTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp TCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGAATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: SMYNSNLLNSNIQLQLNGIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...TCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000639523.1
ENST00000640077.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACACAGTCATCTTACAAATaGTTAAAGCAGGATGTCTGT +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTQSSYK*LKQDVC
Trigger: ACAGACATCCTGCTTTAACAATTTGTAAGATGACTG...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000251871.9
ENST00000638487.1
ENST00000639189.1
CDS-3UTR CAA 90 bp CAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAACAAACTCCAATATTCAATaGCAGTTGAATGGACCTACT +
Preference number: 5 (lower is better)
Translates to: QHSFGSYLFFVLIVDLQTNSNIQ*QLNGPT
Trigger: AGTAGGTCCATTCAACTGCAATTGAATATTGGAGTT...TGTTTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640521.1
CDS TCA 90 bp CTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTaGATGGACCTTTATAGACACACATATTGCATATTTGTTCATAGC +
Preference number: 5 (lower is better)
Translates to: LCTTRICSTPIFNCS*MDLYRHTYCIFVHS
Trigger: GCTATGAACAAATATGCAATATGTGTGTCTATAAAGGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525026.6
ENST00000640027.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAACTTTTTAGATATCAATaGCAACGTCTGAGGATTCTG +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQLFRYQ*QRLRIL
Trigger: CAGAATCCTCAGACGTTGCAATTGATATCTAAAAAG...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS-3UTR CAA 90 bp ATTACTCTTCCATCTCTATGTACAACTCGAATCTGCTCAACTCCAATATTCAATTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: ITLPSLCTTRICSTPIFNFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...ATTGAATATTGGAGTTGAGCAGATTCGAGTTGTACATAGAGATGGAAGAGTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639457.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AATCTGCTCAACTCCAATATTCAATTGCAGTTGAATGGACTTGCATATTTGTTCTTTTGTATTGAAACCTaGATATATGCAGACCCCTCT +
Preference number: 5 (lower is better)
Translates to: NLLNSNIQLQLNGLAYLFFCIET*IYADPS
Trigger: AGAGGGGTCTGCATATATCAAGGTTTCAATACAAAA...GAACAAATATGCAAGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000638487.1
ENST00000638790.1
ENST00000639189.1
ENST00000639523.1
ENST00000639596.1
ENST00000640077.1
CDS-3UTR CAA 90 bp AAACAGCACTCTTTTGGAAGTTATCTCTTCTTTGTGCTTATAGTTGATCTGCAAATTTTTATCAAAAGCTaGAGGACCCGAAAGTCTCAT +
Preference number: 5 (lower is better)
Translates to: KQHSFGSYLFFVLIVDLQIFIKS*RTRKSH
Trigger: ATGAGACTTTCGGGTCCTCAAGCTTTTGATAAAAAT...TTGCAGATCAACTATAAGCACAAAGAAGAGATAACTTCCAAAAGAGTGCTGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000251871.9
ENST00000533133.6
ENST00000638487.1
ENST00000639523.1
ENST00000640027.1
ENST00000640077.1
ENST00000640521.1
CDS GCA 72 bp GCGGAGAGCCGGGAACTCAGAAGCCCGCAGCCGCGGTaGCTCAGAAGACCCTCGGGAAACCGAACGCAACGC +
Preference number: 6 (lower is better)
Translates to: AESRELRSPQPR*LRRPSGNRTQR
Trigger: GCGTTGCGTTCGGTTTCCCGAGGGTCTTCTGAGGCACCGCGGCTGCGGGCTTCTGAGTTCCCGGCTCTCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000251871.9
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640473.1
ENST00000640583.1
ENST00000640804.1
CDS GCA 72 bp CTGCTTCTCGCAGGCCGATTCGATGCTGATCCGCACTaGGCGCACCCCGGACATGCTGGCTGCGTCGGCCAG +
Preference number: 6 (lower is better)
Translates to: LLLAGRFDADPH*AHPGHAGCVGQ
Trigger: CTGGCCGACGCAGCCAGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCTGCGAGAAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640583.1
ENST00000640804.1
CDS TCA 72 bp CCTCATGGACCTGCTTCTCGCAGGCCGATTCGATGCTaGTCCGCACTGCGCGCACCCCGGACATGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: PHGPASRRPIRC*SALRAPRTCWL
Trigger: CAGCCAGCATGTCCGGGGTGCGCGCAGTGCGGATCAGCATCGAATCGGCCTGCGAGAAGCAGGTCCATGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS GCA 72 bp TCTGCGACATGGACAGCGGGGGCAGGTACGTCTCGGTaGCATCCAGGCCCACCTCATGGACCTGCTTCTCGC +
Preference number: 6 (lower is better)
Translates to: SATWTAGAGTSR*HPGPPHGPASR
Trigger: GCGAGAAGCAGGTCCATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGCCCCCGCTGTCCATGTCGCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 72 bp CTATCCGCTGGGCCAGACGCGCCAGATTCTGCGACATaGACAGCGGGGGCAGGTACGTCTCGGTGCCATCCA +
Preference number: 6 (lower is better)
Translates to: LSAGPDAPDSAT*TAGAGTSRCHP
Trigger: TGGATGGCACCGAGACGTACCTGCCCCCGCTGTCCATGTCGCAGAATCTGGCGCGTCTGGCCCAGCGGATAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 20 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000528786.2
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000638518.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 72 bp TCAATTGCAACGTCTGAGGATTCTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCGCCCGGCCACTCCTGC +
Preference number: 6 (lower is better)
Translates to: SIATSEDSSSSS*SALDPAPGHSC
Trigger: GCAGGAGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGAATCCTCAGACGTTGCAATTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528786.2
CDS CCA 72 bp GGCAGGTACGTCTCGGTGCCATCCAGGCCCACCTCATaGACCTGCTTCTCGCAGGCCGATTCGATGCTGATC +
Preference number: 6 (lower is better)
Translates to: GRYVSVPSRPTS*TCFSQADSMLI
Trigger: GATCAGCATCGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGATGGCACCGAGACGTACCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS GCA 72 bp TACGTCTCGGTGCCATCCAGGCCCACCTCATGGACCTaGTTCTCGCAGGCCGATTCGATGCTGATCCGCACT +
Preference number: 6 (lower is better)
Translates to: YVSVPSRPTSWT*FSQADSMLIRT
Trigger: AGTGCGGATCAGCATCGAATCGGCCTGCGAGAAGCAGGTCCATGAGGTGGGCCTGGATGGCACCGAGACGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000251871.9
ENST00000507258.4
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000533359.5
ENST00000638294.1
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640451.1
ENST00000640473.1
ENST00000640521.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 72 bp AACTCAAGGTCTGTTTATGAAACTTCCTCGTCGTCCTaGTCTGCGCTGGACCCGGCGCCCGGCCACTCCTGC +
Preference number: 6 (lower is better)
Translates to: NSRSVYETSSSS*SALDPAPGHSC
Trigger: GCAGGAGTGGCCGGGCGCCGGGTCCAGCGCAGACCAGGACGACGAGGAAGTTTCATAAACAGACCTTGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640473.1
CDS CCA 72 bp CAAGCTCCCTCCTCGGTAAGTCTTTCGGAGCAAAACTaGGCAGGCGCGGAAGCTCCAGGGTTCCCTAGAGCG +
Preference number: 6 (lower is better)
Translates to: QAPSSVSLSEQN*AGAEAPGFPRA
Trigger: CGCTCTAGGGAACCCTGGAGCTTCCGCGCCTGCCCAGTTTTGCTCCGAAAGACTTACCGAGGAGGGAGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000638487.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 72 bp AACCGAACGCAACGCTCAGACTGGAAACAAAGGAGCTaGCCCAGCAACTTTCCCAGAACGCACCGCAAGCTC +
Preference number: 6 (lower is better)
Translates to: NRTQRSDWKQRS*PSNFPRTHRKL
Trigger: GAGCTTGCGGTGCGTTCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGTTCGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000251871.9
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640583.1
ENST00000640804.1
CDS CCA 72 bp AGAAGACCCTCGGGAAACCGAACGCAACGCTCAGACTaGAAACAAAGGAGCTGGCCCAGCAACTTTCCCAGA +
Preference number: 6 (lower is better)
Translates to: RRPSGNRTQRSD*KQRSWPSNFPR
Trigger: TCTGGGAAAGTTGCTGGGCCAGCTCCTTTGTTTCCAGTCTGAGCGTTGCGTTCGGTTTCCCGAGGGTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000251871.9
ENST00000525026.6
ENST00000530819.1
ENST00000533133.6
ENST00000638487.1
ENST00000639189.1
ENST00000639457.1
ENST00000639596.1
ENST00000639724.1
ENST00000640027.1
ENST00000640583.1
ENST00000640804.1
CDS TCA 72 bp GGAAGATCACTTGAACCCAGCAGTTCCAGGTTACAGTaGGCTATGACTCCACCACTGCACTGCACTCCAGTC +
Preference number: 6 (lower is better)
Translates to: GRSLEPSSSRLQ*AMTPPLHCTPV
Trigger: GACTGGAGTGCAGTGCAGTGGTGGAGTCATAGCTCACTGTAACCTGGAACTGCTGGGTTCAAGTGATCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525613.2
CDS TCA 72 bp AATGGTCCCTTCTCATTCAAAGCAGCAGAAAGTACCTaGAATAGCATAGTCACCACTTGGGGAGGCCACCGT +
Preference number: 6 (lower is better)
Translates to: NGPFSFKAAEST*NSIVTTWGGHR
Trigger: ACGGTGGCCTCCCCAAGTGGTGACTATGCTATTTCAGGTACTTTCTGCTGCTTTGAATGAGAAGGGACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640411.1
CDS TCA 72 bp CTAAACAGACTCACCCCAGAATACCATAGACCACACTaGGTACCAGTCTACCCAGAAGCATTTGAAGCGACC +
Preference number: 6 (lower is better)
Translates to: LNRLTPEYHRPH*VPVYPEAFEAT
Trigger: GGTCGCTTCAAATGCTTCTGGGTAGACTGGTACTCAGTGTGGTCTATGGTATTCTGGGGTGAGTCTGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS CAA 72 bp TTGCCTGGGAAAGTCTCAAACTCCTGGCTTCCTGCTTaGGTTCCCCAAAGTGTTGGAATTACAGGCATAAGC +
Preference number: 6 (lower is better)
Translates to: LPGKVSNSWLPA*VPQSVGITGIS
Trigger: GCTTATGCCTGTAATTCCAACACTTTGGGGAACCAAAGCAGGAAGCCAGGAGTTTGAGACTTTCCCAGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530819.1
CDS CAA 72 bp AGCAGAATACCTTTGTTGCAAGGAGATGAGATCCAATaGGGTATATGTGGGCCCTGCCCTAACAGGAGCCAT +
Preference number: 6 (lower is better)
Translates to: SRIPLLQGDEIQ*GICGPCPNRSH
Trigger: ATGGCTCCTGTTAGGGCAGGGCCCACATATACCCAATTGGATCTCATCTCCTTGCAACAAAGGTATTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS CAA 90 bp CTTGCCAGCAGACCATGCAACTGTCTATATAGCAGCAGAATACCTTaGTTGCAAGGAGATGAGATCCAATTGGGTATATGTGGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: LASRPCNCLYSSRIP*LQGDEIQLGICGPC
Trigger: GCAGGGCCCACATATACCCAATTGGATCTCATCTCCTTGCAACAAAGGTATTCTGCTGCTATATAGACAGTTGCATGGTCTGCTGGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS CAA 90 bp CTATATAGCAGCAGAATACCTTTGTTGCAAGGAGATGAGATCCAATaGGGTATATGTGGGCCCTGCCCTAACAGGAGCCATAAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: LYSSRIPLLQGDEIQ*GICGPCPNRSHKLL
Trigger: CAGAAGCTTATGGCTCCTGTTAGGGCAGGGCCCACATATACCCAATTGGATCTCATCTCCTTGCAACAAAGGTATTCTGCTGCTATATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS CAA 90 bp GAAATAGATAACTGCAAGCCTGGTTTGGATTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCGAGGTCACCTATATCTGGAGCCTGT +
Preference number: 6 (lower is better)
Translates to: EIDNCKPGLDLGKGR*KRLTVPRSPISGAC
Trigger: ACAGGCTCCAGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAAATCCAAACCAGGCTTGCAGTTATCTATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640451.1
CDS TCA 72 bp AATTTTACCACTCCTTGTCCGGCAGCAACAAAAAGATaGCGACCAAGTATCCTTACGCTTCCGCTAGAGGGA +
Preference number: 6 (lower is better)
Translates to: NFTTPCPAATKR*RPSILTLPLEG
Trigger: TCCCTCTAGCGGAAGCGTAAGGATACTTGGTCGTCATCTTTTTGTTGCTGCCGGACAAGGAGTGGTAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000639523.1
CDS GCA 72 bp TATGTTGCCTGGGAAAGTCTCAAACTCCTGGCTTCCTaGTTTGGTTCCCCAAAGTGTTGGAATTACAGGCAT +
Preference number: 6 (lower is better)
Translates to: YVAWESLKLLAS*FGSPKCWNYRH
Trigger: ATGCCTGTAATTCCAACACTTTGGGGAACCAAAGCAGGAAGCCAGGAGTTTGAGACTTTCCCAGGCAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530819.1
CDS GCA 72 bp ATACAAGTGCCTATTAAAGTGCCCACTCGTAGAAGGTaGTTAATAAAATACTTCTCCTCGGCCGGGTGCGGT +
Preference number: 6 (lower is better)
Translates to: IQVPIKVPTRRR*LIKYFSSAGCG
Trigger: ACCGCACCCGGCCGAGGAGAAGTATTTTATTAAGCACCTTCTACGAGTGGGCACTTTAATAGGCACTTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640411.1
CDS CAA 72 bp AACTGCAAGCCTGGTTTGGATTTGGGCAAAGGTCGTTaGAAGAGGTTAACTGTGCCGAGGTCACCTATATCT +
Preference number: 6 (lower is better)
Translates to: NCKPGLDLGKGR*KRLTVPRSPIS
Trigger: AGATATAGGTGACCTCGGCACAGTTAACCTCTTCAAACGACCTTTGCCCAAATCCAAACCAGGCTTGCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640451.1
CDS CAA 72 bp ACCAATGAGCCTGTATCTGAGGATCCTCAATTCGGCTaGCTAAGCTGTCAATGGTTGCAGCAGCTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: TNEPVSEDPQFG*LSCQWLQQLCF
Trigger: AAAACAGAGCTGCTGCAACCATTGACAGCTTAGCAAGCCGAATTGAGGATCCTCAGATACAGGCTCATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638518.1
CDS TCA 72 bp CAAAACACTTTGGGAGGACAAGGAGGGACGATCGCTTaGTACCAGGAGTTCAAAACAAACCTGAGCAACATA +
Preference number: 6 (lower is better)
Translates to: QNTLGGQGGTIA*YQEFKTNLSNI
Trigger: TATGTTGCTCAGGTTTGTTTTGAACTCCTGGTATCAAGCGATCGTCCCTCCTTGTCCTCCCAAAGTGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525613.2
CDS GCA 72 bp AAGCATTTGAAGCGACCACAGCTTGCCAGCAGACCATaGAACTGTCTATATAGCAGCAGAATACCTTTGTTG +
Preference number: 6 (lower is better)
Translates to: KHLKRPQLASRP*NCLYSSRIPLL
Trigger: CAACAAAGGTATTCTGCTGCTATATAGACAGTTGCATGGTCTGCTGGCAAGCTGTGGTCGCTTCAAATGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS CAA 72 bp TCAAAACACTTTGGGAGGACAAGGAGGGACGATCGCTaGATACCAGGAGTTCAAAACAAACCTGAGCAACAT +
Preference number: 6 (lower is better)
Translates to: SKHFGRTRRDDR*IPGVQNKPEQH
Trigger: ATGTTGCTCAGGTTTGTTTTGAACTCCTGGTATCAAGCGATCGTCCCTCCTTGTCCTCCCAAAGTGTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525613.2
CDS TCA 72 bp ACTGATGACATCTTTCCTTATCAGGTTTCCAAGGGATaGGAGCCAGCGTTAACCAAGGAGCAAATTCTCGTA +
Preference number: 6 (lower is better)
Translates to: TDDIFPYQVSKG*EPALTKEQILV
Trigger: TACGAGAATTTGCTCCTTGGTTAACGCTGGCTCTCATCCCTTGGAAACCTGATAAGGAAAGATGTCATCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS CCA 72 bp CCAAGGTCACATAGCTATAAACTGGGATACAAAACCTaGGAGTCTAAATCCAGAGCCAAAAACCTGGGAATC +
Preference number: 6 (lower is better)
Translates to: PRSHSYKLGYKT*ESKSRAKNLGI
Trigger: GATTCCCAGGTTTTTGGCTCTGGATTTAGACTCCCAGGTTTTGTATCCCAGTTTATAGCTATGTGACCTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525613.2
CDS GCA 72 bp CATGCAACTGTCTATATAGCAGCAGAATACCTTTGTTaGAAGGAGATGAGATCCAATTGGGTATATGTGGGC +
Preference number: 6 (lower is better)
Translates to: HATVYIAAEYLC*KEMRSNWVYVG
Trigger: GCCCACATATACCCAATTGGATCTCATCTCCTTGCAACAAAGGTATTCTGCTGCTATATAGACAGTTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS CCA 72 bp GTTAAGCAATTTGCCCAAGGTCACATAGCTATAAACTaGGATACAAAACCTGGGAGTCTAAATCCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: VKQFAQGHIAIN*DTKPGSLNPEP
Trigger: TGGCTCTGGATTTAGACTCCCAGGTTTTGTATCCCAGTTTATAGCTATGTGACCTTGGGCAAATTGCTTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525613.2
CDS CAA 72 bp CCATGCAACTGTCTATATAGCAGCAGAATACCTTTGTaGCAAGGAGATGAGATCCAATTGGGTATATGTGGG +
Preference number: 6 (lower is better)
Translates to: PCNCLYSSRIPL*QGDEIQLGICG
Trigger: CCCACATATACCCAATTGGATCTCATCTCCTTGCAACAAAGGTATTCTGCTGCTATATAGACAGTTGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS TCA 72 bp ATTCATAAATGTCAGTACTTGATCCCTGGTAACAAATaGCTTGGGACACACCCACATCTAGACCCATTACTG +
Preference number: 6 (lower is better)
Translates to: IHKCQYLIPGNK*LGTHPHLDPLL
Trigger: CAGTAATGGGTCTAGATGTGGGTGTGTCCCAAGTCATTTGTTACCAGGGATCAAGTACTGACATTTATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525613.2
CDS GCA 72 bp GCATGTAGTAGGCTGTACCATCTAGGGCTGTGTAAGTaGACTCTATTATCATACGATGAAATCCTCTTAACA +
Preference number: 6 (lower is better)
Translates to: ACSRLYHLGLCK*TLLSYDEILLT
Trigger: TGTTAAGAGGATTTCATCGTATGATAATAGAGTGCACTTACACAGCCCTAGATGGTACAGCCTACTACATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640411.1
CDS CCA 72 bp ACAAAACCTGGGAGTCTAAATCCAGAGCCAAAAACCTaGGAATCCAATTCCAAAGCCAGTAATCTTATACAC +
Preference number: 6 (lower is better)
Translates to: TKPGSLNPEPKT*ESNSKASNLIH
Trigger: GTGTATAAGATTACTGGCTTTGGAATTGGATTCCCAGGTTTTTGGCTCTGGATTTAGACTCCCAGGTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525613.2
CDS TCA 72 bp GGACGATCGCTTGATACCAGGAGTTCAAAACAAACCTaGGCAACATATCGACAACCAGTCTCTATAAATAAA +
Preference number: 6 (lower is better)
Translates to: GRSLDTRSSKQT*ATYRQPVSINK
Trigger: TTTATTTATAGAGACTGGTTGTCGATATGTTGCTCAGGTTTGTTTTGAACTCCTGGTATCAAGCGATCGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525613.2
CDS CAA 72 bp CTTTACATAAGAGAACATTCTGTGCCGCTTCTAATTTaGTCTGCCAATGTGGGGAACCTGAAAGACAAGAAA +
Preference number: 6 (lower is better)
Translates to: LYIREHSVPLLI*SANVGNLKDKK
Trigger: TTTCTTGTCTTTCAGGTTCCCCACATTGGCAGACAAAATTAGAAGCGGCACAGAATGTTCTCTTATGTAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531920.6
CDS CAA 72 bp CATTACTTCTTCTCCATGACTAATTTGGTTATGGTCTaGACACTTGTTTTCCTTAAGGACCCAAGTAGCCTC +
Preference number: 6 (lower is better)
Translates to: HYFFSMTNLVMV*TLVFLKDPSSL
Trigger: GAGGCTACTTGGGTCCTTAAGGAAAACAAGTGTCAAGACCATAACCAAATTAGTCATGGAGAAGAAGTAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530819.1
CDS CAA 72 bp AGACCATGCAACTGTCTATATAGCAGCAGAATACCTTaGTTGCAAGGAGATGAGATCCAATTGGGTATATGT +
Preference number: 6 (lower is better)
Translates to: RPCNCLYSSRIP*LQGDEIQLGIC
Trigger: ACATATACCCAATTGGATCTCATCTCCTTGCAACAAAGGTATTCTGCTGCTATATAGACAGTTGCATGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638270.1
CDS CCA 72 bp CAGATTCCACAGTATAGTTTGTGTTACATGCTTTACTaGCTGTCACTATGGATAGCACACTATTTCTTTGCT +
Preference number: 6 (lower is better)
Translates to: QIPQYSLCYMLY*LSLWIAHYFFA
Trigger: AGCAAAGAAATAGTGTGCTATCCATAGTGACAGCCAGTAAAGCATGTAACACAAACTATACTGTGGAATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507258.4
CDS CAA 90 bp TCTAACAGTCATTACTTCTTCTCCATGACTAATTTGGTTATGGTCTaGACACTTGTTTTCCTTAAGGACCCAAGTAGCCTCAATGATTTC +
Preference number: 6 (lower is better)
Translates to: SNSHYFFSMTNLVMV*TLVFLKDPSSLNDF
Trigger: GAAATCATTGAGGCTACTTGGGTCCTTAAGGAAAACAAGTGTCAAGACCATAACCAAATTAGTCATGGAGAAGAAGTAATGACTGTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530819.1
CDS CAA 90 bp TTACAAATGGGTTCTAACAGTCATTACTTCTTCTCCATGACTAATTaGGTTATGGTCTTGACACTTGTTTTCCTTAAGGACCCAAGTAGC +
Preference number: 6 (lower is better)
Translates to: LQMGSNSHYFFSMTN*VMVLTLVFLKDPSS
Trigger: GCTACTTGGGTCCTTAAGGAAAACAAGTGTCAAGACCATAACCAAATTAGTCATGGAGAAGAAGTAATGACTGTTAGAACCCATTTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530819.1
CDS CAA 72 bp GGTTCTAACAGTCATTACTTCTTCTCCATGACTAATTaGGTTATGGTCTTGACACTTGTTTTCCTTAAGGAC +
Preference number: 6 (lower is better)
Translates to: GSNSHYFFSMTN*VMVLTLVFLKD
Trigger: GTCCTTAAGGAAAACAAGTGTCAAGACCATAACCAAATTAGTCATGGAGAAGAAGTAATGACTGTTAGAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530819.1
CDS CAA 90 bp CATGAATATAATAAGCTACCACGTATTTTAACAATTCAAATTCTGTaGACACATAATATGGCTGCTGCCCTTGAACTGGCTAAAGACTGG +
Preference number: 6 (lower is better)
Translates to: HEYNKLPRILTIQIL*THNMAAALELAKDW
Trigger: CCAGTCTTTAGCCAGTTCAAGGGCAGCAGCCATATTATGTGTCAACAGAATTTGAATTGTTAAAATACGTGGTAGCTTATTATATTCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507258.4
CDS CCA 72 bp TATGAAATTTCACAGGATATTCTTTTGAAATTACCCTaGTTTGGATTTGGGCAAAGGTCGTTTGAAGAGGTT +
Preference number: 6 (lower is better)
Translates to: YEISQDILLKLP*FGFGQRSFEEV
Trigger: AACCTCTTCAAACGACCTTTGCCCAAATCCAAACCAGGGTAATTTCAAAAGAATATCCTGTGAAATTTCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640077.1
CDS TCA 72 bp ACTCGAATCTGCTCAACTCCAATATTCAATTGCAGTTaGATGGACCTTTATAGACACACATATTGCATATTT +
Preference number: 6 (lower is better)
Translates to: TRICSTPIFNCS*MDLYRHTYCIF
Trigger: AAATATGCAATATGTGTGTCTATAAAGGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTCGAGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525026.6
ENST00000640027.1
CDS CCA 72 bp GAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATaGACCTTTATAGACACACATATTGCATATTTGTTC +
Preference number: 6 (lower is better)
Translates to: ESAQLQYSIAVE*TFIDTHIAYLF
Trigger: GAACAAATATGCAATATGTGTGTCTATAAAGGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525026.6
ENST00000640027.1
CDS CCA 72 bp GAATCTGCTCAACTCCAATATTCAATTGCAGTTGAATaGACCTTTATAGACACACATACTAAAAATCAGAGA +
Preference number: 6 (lower is better)
Translates to: ESAQLQYSIAVE*TFIDTHTKNQR
Trigger: TCTCTGATTTTTAGTATGTGTGTCTATAAAGGTCCATTCAACTGCAATTGAATATTGGAGTTGAGCAGATTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638270.1