RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED14 (Homo sapiens)

Ensembl gene IDs: ENSG00000180182

Ensembl transcript IDs: ENST00000324817.6, ENST00000416199.5, ENST00000433003.1, ENST00000463072.1, ENST00000472736.1, ENST00000482034.5, ENST00000492219.1, ENST00000495865.1, ENST00000496531.2

Found 429 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCACTTGGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATaGAGTTCCTGGAGTTGTGCAGCACAGTGCTGGCTGGCCTCTGCT +
Preference number: 1 (lower is better)
Translates to: PLGSGGNLQKIVSIP*SSWSCAAQCWLASA
Trigger: AGCAGAGGCCAGCCAGCACTGTGCTGCACAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR TCA 90 bp CAAATCACTGGCCACTTGGAAGTGGAGGCAACTTGCAGAAAATTGTaGGCATACCATGGAGTTCCTGGAGTTGTGCAGCACAGTGCTGGC +
Preference number: 1 (lower is better)
Translates to: QITGHLEVEATCRKL*AYHGVPGVVQHSAG
Trigger: GCCAGCACTGTGCTGCACAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CCA 90 bp AGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTaGAGTTGTGCAGCACAGTGCTGGCTGGCCTCTGCTAACTTTGTC +
Preference number: 1 (lower is better)
Translates to: SGGNLQKIVSIPWSS*SCAAQCWLASANFV
Trigger: GACAAAGTTAGCAGAGGCCAGCCAGCACTGTGCTGCACAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR TCA 90 bp CTCCATTTGACCCTGGACAGGCCCAGGATTCGGGATTCTTCACAATaGGGGGAATGGACCAGGTTTCTTCCAAGCAAAACATTCTATCGT +
Preference number: 1 (lower is better)
Translates to: LHLTLDRPRIRDSSQ*GEWTRFLPSKTFYR
Trigger: ACGATAGAATGTTTTGCTTGGAAGAAACCTGGTCCATTCCCCTCATTGTGAAGAATCCCGAATCCTGGGCCTGTCCAGGGTCAAATGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR TCA 90 bp CAAAAAGAAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTaGCCCTGGACAGGCCCAGGATTCGGGATTCTTCACAATGAGGGG +
Preference number: 1 (lower is better)
Translates to: QKETLQRCINTKNSI*PWTGPGFGILHNEG
Trigger: CCCCTCATTGTGAAGAATCCCGAATCCTGGGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTTCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CCA 90 bp ATTGTGAGCATACCATGGAGTTCCTGGAGTTGTGCAGCACAGTGCTaGCTGGCCTCTGCTAACTTTGTCTTAATAACCTCAATGCTAAAT +
Preference number: 1 (lower is better)
Translates to: IVSIPWSSWSCAAQC*LASANFVLITSMLN
Trigger: ATTTAGCATTGAGGTTATTAAGACAAAGTTAGCAGAGGCCAGCCAGCACTGTGCTGCACAACTCCAGGAACTCCATGGTATGCTCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR GCA 90 bp CGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGTaGTATAAATACAAGCTTCTGGCATTAGCAACTGGGTCAGTCCCA +
Preference number: 1 (lower is better)
Translates to: RGKFYHPNLGLCGNV*YKYKLLALATGSVP
Trigger: TGGGACTGACCCAGTTGCTAATGCCAGAAGCTTGTATTTATAGCACACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
3UTR CCA 90 bp TATTCTTGGGCAAGGTATTTTAACAAATCACTGGCCACTTGGAAGTaGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTG +
Preference number: 1 (lower is better)
Translates to: YSWARYFNKSLATWK*RQLAENCEHTMEFL
Trigger: CAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTTGTTAAAATACCTTGCCCAAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CCA 90 bp CAGTTATATTCTTGGGCAAGGTATTTTAACAAATCACTGGCCACTTaGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAG +
Preference number: 1 (lower is better)
Translates to: QLYSWARYFNKSLAT*KWRQLAENCEHTME
Trigger: CTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTTGTTAAAATACCTTGCCCAAGAATATAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR TCA 90 bp CCCACATCCTCAACAGATGAGAATGATTGCATTATTTGGGATCCTTaGTCAATACGAACCACATACTGTCCCTTCTCAAAGACTAAGTTC +
Preference number: 1 (lower is better)
Translates to: PTSSTDENDCIIWDP*SIRTTYCPFSKTKF
Trigger: GAACTTAGTCTTTGAGAAGGGACAGTATGTGGTTCGTATTGATCAAGGATCCCAAATAATGCAATCATTCTCATCTGTTGAGGATGTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR GCA 90 bp GCTCCAAATAGAAAAGGGCTGACCCTTGATAAAGACATCTTAGATTaGCAAACTGATGTGATTACCACTGTAAGAACTAAAAACAGAAGG +
Preference number: 1 (lower is better)
Translates to: APNRKGLTLDKDILD*QTDVITTVRTKNRR
Trigger: CCTTCTGTTTTTAGTTCTTACAGTGGTAATCACATCAGTTTGGCAATCTAAGATGTCTTTATCAAGGGTCAGCCCTTTTCTATTTGGAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CCA 90 bp TCATCAATCAGTTATATTCTTGGGCAAGGTATTTTAACAAATCACTaGCCACTTGGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATA +
Preference number: 1 (lower is better)
Translates to: SSISYILGQGILTNH*PLGSGGNLQKIVSI
Trigger: TATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTTGTTAAAATACCTTGCCCAAGAATATAACTGATTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTACCAAAAACTCCATTTaGCCCTGGACAGGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSTKNSI*PWTGPG
Trigger: TCCTGGGCCTGTCCAGGGTCAAATGGAGTTTTTGGT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCAGCACAGTGCTGGCTaGCCTCTGCTAACTTTGTCT +
Preference number: 2 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSQHSAG*PLLTLS
Trigger: AGACAAAGTTAGCAGAGGCCAGCCAGCACTGTGCTG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGAACCAGTATTACAGTaGCCAGGTAACTCGGCATGG +
Preference number: 2 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSEPVLQ*PGNSAW
Trigger: CCATGCCGAGTTACCTGGTCACTGTAATACTGGTTC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCGGGATTCTTCACAATaGGGGGAATGGACCAGGTTT +
Preference number: 2 (lower is better)
Translates to: KWRQLAENCEHTMEFLELRDSSQ*GEWTRF
Trigger: AAACCTGGTCCATTCCCCTCATTGTGAAGAATCCCG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCAGCAGATGGAAAAATaGAGGTGGCAAATCAGGACC +
Preference number: 2 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSQQMEK*RWQIRT
Trigger: GGTCCTGATTTGCCACCTTCATTTTTCCATCTGCTG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCTTGACACGTTCTGCTaGAGCTCTCACTTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: KWRQLAENCEHTMEFLELLDTFC*SSHFSS
Trigger: AGAAGAAAAGTGAGAGCTTCAGCAGAACGTGTCAAG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGAGTTGGGTGAGAAGTaGGAGATGAAGGCAGAAATA +
Preference number: 2 (lower is better)
Translates to: KWRQLAENCEHTMEFLELELGEK*EMKAEI
Trigger: TATTTCTGCCTTCATCTCCCACTTCTCACCCAACTC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCCACAGTCCAAAGAATaGCTGTTAGTATCCTTTGGC +
Preference number: 2 (lower is better)
Translates to: KWRQLAENCEHTMEFLELPQSKE*LLVSFG
Trigger: GCCAAAGGATACTAACAGCCATTCTTTGGACTGTGG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CAA 90 bp CAAGGTATTTTAACAAATCACTGGCCACTTGGAAGTGGAGGCAACTaGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTGCA +
Preference number: 2 (lower is better)
Translates to: QGILTNHWPLGSGGN*QKIVSIPWSSWSCA
Trigger: TGCACAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTTGTTAAAATACCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCAAATAGAAAAGGGCTaGCCCTTGATAAAGACATCT +
Preference number: 2 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSQIEKG*PLIKTS
Trigger: AGATGTCTTTATCAAGGGTCAGCCCTTTTCTATTTG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp ATGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAAAAAATGAAGAACCAGTaGGAAAGGAAGAAAGCGACA +
Preference number: 2 (lower is better)
Translates to: MYRVAGIDGRAGIHSRGKKMKNQ*ERKKAT
Trigger: TGTCGCTTTCTTCCTTTCTCACTGGTTCTTCATTTT...TTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACAT
44% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433003.1
3UTR-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTTAGAGAAAATCACTTaGGCATCCAGTCCCCTTGAT +
Preference number: 2 (lower is better)
Translates to: KWRQLAENCEHTMEFLELLEKIT*ASSPLD
Trigger: ATCAAGGGGACTGGATGCCCAAGTGATTTTCTCTAA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGCTGTTAGTATCCTTTaGCTGAACAGATTACTGTGT +
Preference number: 2 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSAVSIL*LNRLLC
Trigger: ACACAGTAATCTGTTCAGCCAAAGGATACTAACAGC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGAGAAGGCTTCAACTCTaGTTGAAAATGAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: KWRQLAENCEHTMEFLELRRLQL*LKMSGE
Trigger: TTCTCCACTCATTTTCAATCAGAGTTGAAGCCTTCT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp ATTCACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGAGACCTCTATTGCTATaGTTGGGTGGTAGAGTAGGT +
Preference number: 2 (lower is better)
Translates to: IHSRGKFYHPNLGLCGNVRPLLL*LGGRVG
Trigger: ACCTACTCTACCACCCAATCATAGCAATAGAGGTCT...CACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
3UTR-3UTR GCA 90 bp ATTCACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGCAACCAGACCTCTATTaGTATGATTGGGTGGTAGAG +
Preference number: 2 (lower is better)
Translates to: IHSRGKFYHPNLGLCGNVQPDLY*YDWVVE
Trigger: CTCTACCACCCAATCATAGCAATAGAGGTCTGGTTG...CACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
3UTR-3UTR GCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGAAAGACATCTTAGATTaGCAAACTGATGTGATTACC +
Preference number: 2 (lower is better)
Translates to: KWRQLAENCEHTMEFLELKDILD*QTDVIT
Trigger: GGTAATCACATCAGTTTGGCAATCTAAGATGTCTTT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CAA 90 bp CTCAAACTGCCCCTTCTTAGCAGTTTGATCTTAAGCAACCTTAATTaGATCTCAGGCAAATTACATTTCTCTGGGCCTCCATTTACTCAT +
Preference number: 2 (lower is better)
Translates to: LKLPLLSSLILSNLN*ISGKLHFSGPPFTH
Trigger: ATGAGTAAATGGAGGCCCAGAGAAATGTAATTTGCCTGAGATCAAATTAAGGTTGCTTAAGATCAAACTGCTAAGAAGGGGCAGTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR GCA 90 bp AACATGCATTTCAACTTTGTGATGTACAGAGTGGCAGGTATTGATGGTAGGGCACTTTGTGGCAATGTGTaGTATAAATACAAGCTTCTG +
Preference number: 2 (lower is better)
Translates to: NMHFNFVMYRVAGIDGRALCGNV*YKYKLL
Trigger: CAGAAGCTTGTATTTATAGCACACATTGCCACAAAG...TGCCCTACCATCAATACCTGCCACTCTGTACATCACAAAGTTGAAATGCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
3UTR-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCTGGCAAACGGACACTaGTTTATTTCCTTTGAAATG +
Preference number: 2 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFLANGH*FISFEM
Trigger: CATTTCAAAGGAAATAAATCAGTGTCCGTTTGCCAG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTATTATTTGGGATCCTTaGTCAATACGAACCACATAC +
Preference number: 2 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFIIWDP*SIRTTY
Trigger: GTATGTGGTTCGTATTGATCAAGGATCCCAAATAAT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTCCAAAAAGAAACCCTaGAGAGATGTATTAATACCA +
Preference number: 2 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFSKKKP*RDVLIP
Trigger: TGGTATTAATACATCTCTGCAGGGTTTCTTTTTGGA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR TCA 72 bp ACCCTGGACAGGCCCAGGATTCGGGATTCTTCACAATaGGGGGAATGGACCAGGTTTCTTCCAAGCAAAACA +
Preference number: 3 (lower is better)
Translates to: TLDRPRIRDSSQ*GEWTRFLPSKT
Trigger: TGTTTTGCTTGGAAGAAACCTGGTCCATTCCCCTCATTGTGAAGAATCCCGAATCCTGGGCCTGTCCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR TCA 72 bp GGCCACTTGGAAGTGGAGGCAACTTGCAGAAAATTGTaGGCATACCATGGAGTTCCTGGAGTTGTGCAGCAC +
Preference number: 3 (lower is better)
Translates to: GHLEVEATCRKL*AYHGVPGVVQH
Trigger: GTGCTGCACAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CCA 72 bp AGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATaGAGTTCCTGGAGTTGTGCAGCACAGTGCTGGCTG +
Preference number: 3 (lower is better)
Translates to: SGGNLQKIVSIP*SSWSCAAQCWL
Trigger: CAGCCAGCACTGTGCTGCACAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGAGAACAATCCCAATTTaGGTGGGGAAGGAAAGGAGG +
Preference number: 3 (lower is better)
Translates to: KWRQLAENCEHTMEFLELRTIPI*VGKERR
Trigger: CCTCCTTTCCTTCCCCACCAAAATTGGGATTGTTCT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCCTGTTATTAGCGACTaGACACGTTCTGCTGAAGCT +
Preference number: 3 (lower is better)
Translates to: KWRQLAENCEHTMEFLELPVISD*TRSAEA
Trigger: AGCTTCAGCAGAACGTGTCAAGTCGCTAATAACAGG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR TCA 72 bp ACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTaGCCCTGGACAGGCCCAGGATTCGGGATTCTTCAC +
Preference number: 3 (lower is better)
Translates to: TLQRCINTKNSI*PWTGPGFGILH
Trigger: GTGAAGAATCCCGAATCCTGGGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTAGATGGATGATCATTTaGATGAAAGAAGTGCACCCT +
Preference number: 3 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSRWMII*MKEVHP
Trigger: AGGGTGCACTTCTTTCATCAAAATGATCATCCATCT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CCA 72 bp GCAAGGTATTTTAACAAATCACTGGCCACTTGGAAGTaGAGGCAACTTGCAGAAAATTGTGAGCATACCATG +
Preference number: 3 (lower is better)
Translates to: ARYFNKSLATWK*RQLAENCEHTM
Trigger: CATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTTGTTAAAATACCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR TCA 72 bp TCAACAGATGAGAATGATTGCATTATTTGGGATCCTTaGTCAATACGAACCACATACTGTCCCTTCTCAAAG +
Preference number: 3 (lower is better)
Translates to: STDENDCIIWDP*SIRTTYCPFSK
Trigger: CTTTGAGAAGGGACAGTATGTGGTTCGTATTGATCAAGGATCCCAAATAATGCAATCATTCTCATCTGTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR GCA 72 bp AGAAAAGGGCTGACCCTTGATAAAGACATCTTAGATTaGCAAACTGATGTGATTACCACTGTAAGAACTAAA +
Preference number: 3 (lower is better)
Translates to: RKGLTLDKDILD*QTDVITTVRTK
Trigger: TTTAGTTCTTACAGTGGTAATCACATCAGTTTGGCAATCTAAGATGTCTTTATCAAGGGTCAGCCCTTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GAAGAAAGCGACAGGCAGACATTAAGAGGGCCACGGCAACCAGACCTCTATTGCAGGCGTCCCAGGAGGTaGAATCGGCGGCGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: EESDRQTLRGPRQPDLYCRRPRR*NRRRAG
Trigger: CCCAGCGCGCCGCCGATTGCACCTCCTGGGACGCCT...GCAATAGAGGTCTGGTTGCCGTGGCCCTCTTAATGTCTGCCTGTCGCTTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp GAACCAGTGAGAAAGGAAGAAAGCGACAGGCAGACATTAAGAGGGCCACGGCAACATGCGTGCTGCTGGTaGGGGGCCAGACACTTGAGG +
Preference number: 4 (lower is better)
Translates to: EPVRKEESDRQTLRGPRQHACCW*GARHLR
Trigger: CCTCAAGTGTCTGGCCCCTCACCAGCAGCACGCATG...TTGCCGTGGCCCTCTTAATGTCTGCCTGTCGCTTTCTTCCTTTCTCACTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGCGCAGGACCGGGCTTaGCGCAACGGCACACGATGC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSAQDRA*RNGTRC
Trigger: GCATCGTGTGCCGTTGCGCCAAGCCCGGTCCTGCGC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCAGGCGTCCCAGGAGGTaGAATCGGCGGCGCGCTGGG +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQARRPRR*NRRRAG
Trigger: CCCAGCGCGCCGCCGATTGCACCTCCTGGGACGCCT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCGCTGCACTGGGGCCATaGCGGCGCAGGACCGGGCTT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAAALGP*RRRTGL
Trigger: AAGCCCGGTCCTGCGCCGCCATGGCCCCAGTGCAGC...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCATGCGTGCTGCTGGTaGGGGGCCAGACACTTGAGG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSHACCW*GARHLR
Trigger: CCTCAAGTGTCTGGCCCCTCACCAGCAGCACGCATG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCGCAACGGCACACGATaGGGTCCTCGAGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQARNGTR*GPRASR
Trigger: CCGGGAGGCTCGAGGACCGCATCGTGTGCCGTTGCG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTGGTGGTTCTCCAGCTaGACTGGGGCCATGGCGGCG +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELWWFSS*TGAMAA
Trigger: CGCCGCCATGGCCCCAGTGCAGCTGGAGAACCACCA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCCGGGCGGGACCAGCTaGTGGTTCTCCAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELPGGTS*WFSSCT
Trigger: AGTGCAGCTGGAGAACCACCAGCTGGTCCCGCCCGG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GAACCAGTGAGAAAGGAAGAAAGCGACAGGCAGACATTAAGAGGGCCACGGCAACACTTGAGGAGATCCTaGCCAGTTCCCTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: EPVRKEESDRQTLRGPRQHLRRS*PVPCSS
Trigger: GGACGAGCAGGGAACTGGCCAGGATCTCCTCAAGTG...TTGCCGTGGCCCTCTTAATGTCTGCCTGTCGCTTTCTTCCTTTCTCACTGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCAATCGGCGGCGCGCTaGGAGGGATCGTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELQSAAR*EGSSGK
Trigger: TTTGCCTGACGATCCCTCCCAGCGCGCCGCCGATTG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCCAGCTCGAGGGGAATaGGAAGCATCTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSPARGE*EASGTG
Trigger: TCCGGTTCCAGATGCTTCTCATTCCCCTCGAGCTGG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTGTGATGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGATGGTAGGTATGGATaGCGCCCAAGAGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: FVMYRVAGIDGRAGIHSRDGRYG*RPRALR
Trigger: CCTCAGCGCTCTTGGGCGGCATCCATACCTACCATC...ACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACATCACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTACAAAGGTAACTACCTaGCAGGCCGGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSTKVTT*QAGHKA
Trigger: GGCCTTGTGCCCGGCCTGGCAGGTAGTTACCTTTGT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCTCTCAAAGCCCCACTaGGGGAGCTGGCAGCATGCA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELLSKPH*GSWQHA
Trigger: TGCATGCTGCCAGCTCCCCCAGTGGGGCTTTGAGAG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGGCCCCTGGTCCTATTaGGATTCCATGCGAGGATGG +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELGPWSY*DSMRGW
Trigger: CCATCCTCGCATGGAATCTCAATAGGACCAGGGGCC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCTGCTGCAGCAGCAATaGCATTGCAGGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLLQQQ*HCRAVF
Trigger: GAAGACAGCCCTGCAATGGCATTGCTGCTGCAGCAG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGGGGAGCTGGCAGCATaGAGATTTCCTGGAGACTGT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSGELAA*RFPGDC
Trigger: ACAGTCTCCAGGAAATCTGCATGCTGCCAGCTCCCC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCGTGACATTCCAGGCATaGGTGCTGCTGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAVTFQA*VLLVRG
Trigger: GCCCCTCACCAGCAGCACGCATGCCTGGAATGTCAC...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGATGGTAGGTATGGATaGCGCCCAAGAGCGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELDGRYG*RPRALR
Trigger: CCTCAGCGCTCTTGGGCGGCATCCATACCTACCATC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCTGGGAATGTCTGCCTaGTGGGTTGTACCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLGMSA*WVVPEA
Trigger: GGCTTCAGGTACAACCCAGCAGGCAGACATTCCCAG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGTCCCTAATGCAGGTTaGCAGCCGTGGGTAAGATCC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSVPNAG*QPWVRS
Trigger: GGATCTTACCCACGGCTGCCAACCTGCATTAGGGAC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGCTGCTTTGGAAATaGCTGTTGCTGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSWLLWK*LLLGWW
Trigger: CCACCACCCCAGCAACAGCCATTTCCAAAGCAGCCA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AACTGGGTCAGTCCCAATAGTAAATCACTAACAAAAAGTCCAGGCAGCAGAGAACAATCGGCGGCGCGCTaGGAGGGATCGTCAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NWVSPNSKSLTKSPGSREQSAAR*EGSSGK
Trigger: TTTGCCTGACGATCCCTCCCAGCGCGCCGCCGATTG...TTCTCTGCTGCCTGGACTTTTTGTTAGTGATTTACTATTGGGACTGACCCAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGCAGCAGAAATTCAATaGGGGTGCTCAGCCGGTAGC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELAAEIQ*GCSAGS
Trigger: GCTACCGGCTGAGCACCCTCATTGAATTTCTGCTGC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCTCGTCCACTTGGTaGCACCATAGTGTATGGGGA +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSCSSTW*HHSVWG
Trigger: TCCCCATACACTATGGTGTCACCAAGTGGACGAGCA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCGGCACCATCCCGTATTaGCACAACACCTCGACTCCG +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAGTIPY*HNTSTP
Trigger: CGGAGTCGAGGTGTTGTGGCAATACGGGATGGTGCC...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTTTGGAAATGGCTGTTaGTGGGGTGGTGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELFGNGC*WGGGWS
Trigger: GCTCCAGCCACCACCCCAGCAACAGCCATTTCCAAA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GGAATTCACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGACATTCCAGGCATaGGTGCTGCTGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: GIHSRGKFYHPNLGLCGNVTFQA*VLLVRG
Trigger: GCCCCTCACCAGCAGCACGCATGCCTGGAATGTCAC...ATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTGAATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCACAGGGCTCCAAGATaGGAACAACAAGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSHRAPR*EQQELG
Trigger: TCCCAGCTCTTGTTGTTCCCATCTTGGAGCCCTGTG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGTAAACGTGCCGGGATaGTCCTTGCTCCCTAGTAGA +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSVNVPG*SLLPSR
Trigger: TCTACTAGGGAGCAAGGACCATCCCGGCACGTTTAC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGCAGTATTGGTTCTCTaGGTCAAGCCCAACATCGGC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSAVLVL*VKPNIG
Trigger: GCCGATGTTGGGCTTGACCCAGAGAACCAATACTGC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGTGGGTGGACGACTGTaGCAGAATGGAGAAGCACTG +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELVGGRL*QNGEAL
Trigger: CAGTGCTTCTCCATTCTGCCACAGTCGTCCACCCAC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGAAGGCCAGTCTGATGTaGGTGGACGACTGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELKASLM*VDDCGR
Trigger: TCTGCCACAGTCGTCCACCCACATCAGACTGGCCTT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCTGGCTGTTGCTGGGGTaGTGGCTGGAGCTGCGATAT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAWLLLG*WLELRY
Trigger: ATATCGCAGCTCCAGCCACCACCCCAGCAACAGCCA...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTTCCTGGCTGCTTTaGAAATGGCTGTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSCSWLL*KWLLLG
Trigger: CCCCAGCAACAGCCATTTCCAAAGCAGCCAGGAACA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTAGCGAATTGCATGGCTaGAGCCATCACCTTCCACTT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSSELHG*SHHLPL
Trigger: AAGTGGAAGGTGATGGCTTCAGCCATGCAATTCGCT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AACATGCATTTCAACTTTGTGATGTACAGAGTGGCAGGTATTGATGGTAGGGCACCAGCTCGAGGGGAATaGGAAGCATCTGGAACCGGA +
Preference number: 4 (lower is better)
Translates to: NMHFNFVMYRVAGIDGRAPARGE*EASGTG
Trigger: TCCGGTTCCAGATGCTTCTCATTCCCCTCGAGCTGG...TGCCCTACCATCAATACCTGCCACTCTGTACATCACAAAGTTGAAATGCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp GCTTCTGGCATTAGCAACTGGGTCAGTCCCAATAGTAAATCACTAACAAAAAGTGCCGCCCAAGAGCGCTaGGGTAGTTTACGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ASGISNWVSPNSKSLTKSAAQER*GSLRGG
Trigger: TCCACCTCGTAAACTACCTCAGCGCTCTTGGGCGGC...ACTTTTTGTTAGTGATTTACTATTGGGACTGACCCAGTTGCTAATGCCAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp GAACCAGTGAGAAAGGAAGAAAGCGACAGGCAGACATTAAGAGGGCCACGGCAACTGCTGGGTTGTACCTaGAGCCATGTCATAAATGAT +
Preference number: 4 (lower is better)
Translates to: EPVRKEESDRQTLRGPRQLLGCT*SHVIND
Trigger: ATCATTTATGACATGGCTTCAGGTACAACCCAGCAG...TTGCCGTGGCCCTCTTAATGTCTGCCTGTCGCTTTCTTCCTTTCTCACTGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCGGGATTCTTCACAATaGGGGGAATGGACCAGGTTT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSRDSSQ*GEWTRF
Trigger: AAACCTGGTCCATTCCCCTCATTGTGAAGAATCCCG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCAGCAGCAATGCCATTaGAGGGCTGTCTTCACGATC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELQQQCH*RAVFTI
Trigger: GATCGTGAAGACAGCCCTGCAATGGCATTGCTGCTG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GGAATTCACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATACAAAGGTAACTACCTaGCAGGCCGGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: GIHSRGKFYHPNLGLCGNTKVTT*QAGHKA
Trigger: GGCCTTGTGCCCGGCCTGGCAGGTAGTTACCTTTGT...ATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTGAATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp GAAGAAAGCGACAGGCAGACATTAAGAGGGCCACGGCAACCAGACCTCTATTGCAGGTTTCCACTGTCCTaGATTTTCAGGTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: EESDRQTLRGPRQPDLYCRFPLS*IFRCHF
Trigger: AAAGTGACACCTGAAAATGCAGGACAGTGGAAACCT...GCAATAGAGGTCTGGTTGCCGTGGCCCTCTTAATGTCTGCCTGTCGCTTTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTAATCGAACGAAGAGTTaGCGTGTCCGGCTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSNRTKS*RVRLAN
Trigger: GTTTGCTAGCCGGACACGCCAACTCTTCGTTCGATT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGGGAACAACAAGAGCTaGGAGTGCAGTCTCTATGGA +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSGNNKS*ECSLYG
Trigger: TCCATAGAGACTGCACTCCCAGCTCTTGTTGTTCCC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGACGACTGTGGCAGAATaGAGAAGCACTGGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELTTVAE*RSTGRQ
Trigger: CTGCCTACCAGTGCTTCTCCATTCTGCCACAGTCGT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCTGATTTGCATGCTATaGACCAAAGCTCGCCCATCT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLICML*TKARPS
Trigger: AGATGGGCGAGCTTTGGTTCATAGCATGCAAATCAG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCCTGAATGTTTTCCTTaGACTGCTGCAGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSPECFP*TAAAAM
Trigger: CATTGCTGCTGCAGCAGTTCAAGGAAAACATTCAGG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTCCACTTGCACTCCTTaGTGTGGAATCTCCAGATTG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSSTCTP*CGISRL
Trigger: CAATCTGGAGATTCCACATCAAGGAGTGCAAGTGGA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGCCGCCCAAGAGCGCTaGGGTAGTTTACGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFAAQER*GSLRGG
Trigger: TCCACCTCGTAAACTACCTCAGCGCTCTTGGGCGGC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCACCAAAAACTCCATTTaGCCCTGGACAGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQATKNSI*PWTGPG
Trigger: TCCTGGGCCTGTCCAGGGTCAAATGGAGTTTTTGGT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCTGTTATTAGCGACTTaGCACGTTCTGCTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLLLAT*HVLLKL
Trigger: GAGCTTCAGCAGAACGTGTCAAGTCGCTAATAACAG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GAAGAAAGCGACAGGCAGACATTAAGAGGGCCACGGCAACCAGACCTCTATTGCAAAATGAAGAACCAGTaGGAAAGGAAGAAAGCGACA +
Preference number: 4 (lower is better)
Translates to: EESDRQTLRGPRQPDLYCKMKNQ*ERKKAT
Trigger: TGTCGCTTTCTTCCTTTCTCACTGGTTCTTCATTTT...GCAATAGAGGTCTGGTTGCCGTGGCCCTCTTAATGTCTGCCTGTCGCTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp AACATGCATTTCAACTTTGTGATGTACAGAGTGGCAGGTATTGATGGTAGGGCACTGGGAATGTCTGCCTaGTGGGTTGTACCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: NMHFNFVMYRVAGIDGRALGMSA*WVVPEA
Trigger: GGCTTCAGGTACAACCCAGCAGGCAGACATTCCCAG...TGCCCTACCATCAATACCTGCCACTCTGTACATCACAAAGTTGAAATGCATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGCAACAGAAGAGTTCTaGTGTCTGGGAATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELATEEF*CLGMSA
Trigger: GGCAGACATTCCCAGACAGCAGAACTCTTCTGTTGC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGTTCTCCAGCTGCACTaGGGCCATGGCGGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCVLQLH*GHGGAG
Trigger: TCCTGCGCCGCCATGGCCCCAGTGCAGCTGGAGAAC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCTTGAGAAGACGCCATaGAACATCAGGGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELLEKTP*NIRVIS
Trigger: GGAGATGACCCTGATGTTCCATGGCGTCTTCTCAAG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGACTGGTAGGCAGTATTaGTTCTCTGGGTCAAGCCCA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELTGRQY*FSGSSP
Trigger: TGGGCTTGACCCAGAGAACCAATACTGCCTACCAGT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCCCCACTGGGGGAGCTaGCAGCATGCAGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFPHWGS*QHADFL
Trigger: CAGGAAATCTGCATGCTGCCAGCTCCCCCAGTGGGG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGACTGCTCCTGAACAGTaGCAGAGTTGGGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELTAPEQ*QSWVRS
Trigger: ACTTCTCACCCAACTCTGCCACTGTTCAGGAGCAGT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCAGCACAGTGCTGGCTaGCCTCTGCTAACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAQHSAG*PLLTLS
Trigger: AGACAAAGTTAGCAGAGGCCAGCCAGCACTGTGCTG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCTGTGCAGCACAGTGCTaGCTGGCCTCTGCTAACTTT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQACAAQC*LASANF
Trigger: AAAGTTAGCAGAGGCCAGCCAGCACTGTGCTGCACA...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCAAGAGGATAAGCACCTaGTGTTCCTGGCTGCTTTGG +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAKRIST*CSWLLW
Trigger: CCAAAGCAGCCAGGAACATCAGGTGCTTATCCTCTT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp CACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGTGCATGTTCAAGGCACTGTaGGTGAGGATGGTAGGTATG +
Preference number: 4 (lower is better)
Translates to: HSRGKFYHPNLGLCGNVCMFKAL*VRMVGM
Trigger: CATACCTACCATCCTCACTCACAGTGCCTTGAACAT...GCACACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTCTTCAGAATGTTGCTaGCCATCATGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELSSECC*PSWEQQ
Trigger: TTGCTGCTCCCATGATGGTCAGCAACATTCTGAAGA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATAGACCTCTATTGCTATaGTTGGGTGGTAGAGTAGGT +
Preference number: 4 (lower is better)
Translates to: CTEWQVLMVGQEFTAVENRPLLL*LGGRVG
Trigger: ACCTACTCTACCACCCAATCATAGCAATAGAGGTCT...ATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCTTCTGATGAGCTCTTaGATGGACACTGTCAATCAG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLLMSS*MDTVNQ
Trigger: CTGATTGACAGTGTCCATGCAAGAGCTCATCAGAAG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTAACAAGAGCTGGGAGTaGAGTCTCTATGGAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSNKSWE*SLYGRV
Trigger: AACTCTTCCATAGAGACTGCACTCCCAGCTCTTGTT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGAGTTCCTGGAGTTGTaGAGCACAGTGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFEFLEL*STVLAG
Trigger: GCCAGCCAGCACTGTGCTGCACAACTCCAGGAACTC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGTTGTGTGGGTTTATTaGGAACCTCCAACATCTCCA +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSVVWVY*EPPTSP
Trigger: TGGAGATGTTGGAGGTTCCCAATAAACCCACACAAC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTACGACAGTTGTGTaGGTTTATTGGGAACCTCCA +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSCTTVV*VYWEPP
Trigger: TGGAGGTTCCCAATAAACCCACACAACTGTCGTACA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCAGACAACTTGCGCTTaGCATTGGTTCTGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELQTTCA*HWFWSV
Trigger: AACAGACCAGAACCAATGCCAAGCGCAAGTTGTCTG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCGGTCCAGAGCCTTTTaGGTTTCCTCAGTTATACCC +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQARSRAF*VSSVIP
Trigger: GGGTATAACTGAGGAAACCCAAAAGGCTCTGGACCG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCACTTGAGGAGATCCTaGCCAGTTCCCTGCTCGTCC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFHLRRS*PVPCSS
Trigger: GGACGAGCAGGGAACTGGCCAGGATCTCCTCAAGTG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCTTTAGCTGTGTTGCTTaGTCAGGGAACAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAFSCVA*SGNSSS
Trigger: GCTGGAGCTGTTCCCTGACCAAGCAACACAGCTAAA...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATTGTACCTTGTCGTGGTaGATTCATCTCTGCAAACCT +
Preference number: 4 (lower is better)
Translates to: CTEWQVLMVGQEFTAVENCTLSW*IHLCKP
Trigger: AGGTTTGCAGAGATGAATCCACCACGACAAGGTACA...ATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGGCAAAGGAGGATCGTaGAAAATCTGTAAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELGKGGS*KICKGL
Trigger: CAAGCCTTTACAGATTTTTCACGATCCTCCTTTGCC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCAATGTGCAGACACTCTaGATTACCACAGGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQANVQTL*ITTGLQ
Trigger: TTGGAGCCCTGTGGTAATTCAGAGTGTCTGCACATT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTTGAGGGAGACTGATTaGCTGTGCTATGATAAGATG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLRETD*LCYDKM
Trigger: CATCTTATCATAGCACAGTCAATCAGTCTCCCTCAA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGGTGTCACTTTTAGCTaGAGCGTTTGGTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELGVTFS*SVWLVL
Trigger: CAAAACCAACCAAACGCTTCAGCTAAAAGTGACACC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTACTTGCAGAAAATTGTaGGCATACCATGGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSTCRKL*AYHGVP
Trigger: AGGAACTCCATGGTATGCTCACAATTTTCTGCAAGT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATTCTGCATTTCAACTTTGTaGTGTACAGAGTGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: YRVAGIDGRAGIHSRGKFCISTL*CTEWQV
Trigger: TACCTGCCACTCTGTACATCACAAAGTTGAAATGCA...GAATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTTTTCCTTGAACTGCTaGAGCAGCAATGCCATTGCA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELFSLNC*SSNAIA
Trigger: TGCAATGGCATTGCTGCTGCAGCAGTTCAAGGAAAA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCGGTGGTGGCTGGAGCTaGGATATTAAAGAATCCATC +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAGGGWS*DIKESI
Trigger: GATGGATTCTTTAATATCGCAGCTCCAGCCACCACC...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGAAGCTGATGGAGAATaGTATTGTGACAGTTACTGC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSEADGE*YCDSYC
Trigger: GCAGTAACTGTCACAATACCATTCTCCATCAGCTTC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGGAAATGGCTGTTGCTaGGGTGGTGGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCGNGCC*GGGWSC
Trigger: GCAGCTCCAGCCACCACCCCAGCAACAGCCATTTCC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp CAGACATTAAGAGGGCCACGGCAACCAGACCTCTATTGCTATGATTGGGTGGTAAAGGAATCTCTCAAGTaGAGAACAAAGGTAACTACC +
Preference number: 4 (lower is better)
Translates to: QTLRGPRQPDLYCYDWVVKESLK*RTKVTT
Trigger: GGTAGTTACCTTTGTTCTCCACTTGAGAGATTCCTT...TACCACCCAATCATAGCAATAGAGGTCTGGTTGCCGTGGCCCTCTTAATGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp CAGACATTAAGAGGGCCACGGCAACCAGACCTCTATTGCTATGATTGGGTGGTACGTATTAGCTTTAAATaGTGGTCCTGCAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: QTLRGPRQPDLYCYDWVVRISFK*WSCNSC
Trigger: ACAAGAGTTGCAGGACCACCATTTAAAGCTAATACG...TACCACCCAATCATAGCAATAGAGGTCTGGTTGCCGTGGCCCTCTTAATGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGATACTAACAGGTTCTTaGGGAGGGACCGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELILTGS*GGTDVF
Trigger: GAAAACATCGGTCCCTCCCCAAGAACCTGTTAGTAT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AACCTAGGTCTTTGTGGCAATGTGTGCTATAAATACAAGCTTCTGGCATTAGCAGGAATGTCTGCCTGCTaGGTTGTACCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: NLGLCGNVCYKYKLLALAGMSAC*VVPEAM
Trigger: CATGGCTTCAGGTACAACCCAGCAGGCAGACATTCC...TGCTAATGCCAGAAGCTTGTATTTATAGCACACATTGCCACAAAGACCTAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp AACCTAGGTCTTTGTGGCAATGTGTGCTATAAATACAAGCTTCTGGCATTAGCAAAGAGTTCTGCTGTCTaGGAATGTCTGCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: NLGLCGNVCYKYKLLALAKSSAV*ECLPAG
Trigger: CCCAGCAGGCAGACATTCCCAGACAGCAGAACTCTT...TGCTAATGCCAGAAGCTTGTATTTATAGCACACATTGCCACAAAGACCTAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCCCCTTGATCGAACCTaGGTAACAAAAGAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELPLDRT*VTKEAK
Trigger: TTTTGCCTCTTTTGTTACCCAGGTTCGATCAAGGGG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGATTGTGAGCATACCATaGAGTTCCTGGAGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELIVSIP*SSWSCA
Trigger: TGCACAACTCCAGGAACTCCATGGTATGCTCACAAT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCTGGCCACTTGGAAGTaGAGGCAACTTGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQALATWK*RQLAEN
Trigger: ATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCCAG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGAAACCTTCCCGACTGTaGTTCACAGCAAAAATGTCC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELKPSRL*FTAKMS
Trigger: GGACATTTTTGCTGTGAACCACAGTCGGGAAGGTTT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CAA 72 bp TTAACAAATCACTGGCCACTTGGAAGTGGAGGCAACTaGCAGAAAATTGTGAGCATACCATGGAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: LTNHWPLGSGGN*QKIVSIPWSSW
Trigger: CCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCAAAACTTAAGTTGCTaGATCCAGGGTATGATTCGT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSQNLSC*IQGMIR
Trigger: ACGAATCATACCCTGGATTCAGCAACTTAAGTTTTG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCATAAGATGTAGGGGGTaGAGTAAGAGGATAAGCACC +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAIRCRG*SKRIST
Trigger: GGTGCTTATCCTCTTACTTCACCCCCTACATCTTAT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATTCTATCATCCTAACCGGTGTCACTTTTAGCTaGAGCGTTTGGTTGGTTTTG +
Preference number: 4 (lower is better)
Translates to: VLMVGQEFTAVENSIILTGVTFS*SVWLVL
Trigger: CAAAACCAACCAAACGCTTCAGCTAAAAGTGACACC...GGTTAGGATGATAGAATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTATCGTCAGGCAAAACTaGACATTCCATTTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSIVRQN*TFHFSC
Trigger: ACAGCTAAAATGGAATGTTCAGTTTTGCCTGACGAT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCTGGCAAACGGACACTaGTTTATTTCCTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLANGH*FISFEM
Trigger: CATTTCAAAGGAAATAAATCAGTGTCCGTTTGCCAG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGGCATCCAGTCCCCTTaGTCGAACCTGGGTAACAAA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFGIQSP*SNLGNK
Trigger: TTTGTTACCCAGGTTCGATCAAGGGGACTGGATGCC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCTTGACACGTTCTGCTaGAGCTCTCACTTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQALDTFC*SSHFSS
Trigger: AGAAGAAAAGTGAGAGCTTCAGCAGAACGTGTCAAG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATTCTATCATCCTAACCTCCAGCTTCATAATGTaGACACAATCCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VLMVGQEFTAVENSIILTSSFIM*TQSLRM
Trigger: CATCCTCAGGGATTGTGTGCACATTATGAAGCTGGA...GGTTAGGATGATAGAATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp AACCTAGGTCTTTGTGGCAATGTGTGCTATAAATACAAGCTTCTGGCATTAGCAGCAACAGAAGAGTTCTaGTGTCTGGGAATGTCTGCC +
Preference number: 4 (lower is better)
Translates to: NLGLCGNVCYKYKLLALAATEEF*CLGMSA
Trigger: GGCAGACATTCCCAGACAGCAGAACTCTTCTGTTGC...TGCTAATGCCAGAAGCTTGTATTTATAGCACACATTGCCACAAAGACCTAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGTGGATTCATCTCTaGAAACCTCTTCAGAATGTT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSWWIHL*KPLQNV
Trigger: AACATTCTGAAGAGGTTTGCAGAGATGAATCCACCA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTGTCCACAAACAGGATaGCTTGCTGATCTAAAAAGC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELCPQTG*LADLKS
Trigger: GCTTTTTAGATCAGCAAGCCATCCTGTTTGTGGACA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCGGATTCTACTGGACATaGATCATCAGACAACTTGCG +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAGFYWT*IIRQLA
Trigger: CGCAAGTTGTCTGATGATCCATGTCCAGTAGAATCC...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCAGCATGCAGATTTCCTaGAGACTGTGTGTGCATCAT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQASMQIS*RLCVHH
Trigger: ATGATGCACACACAGTCTCCAGGAAATCTGCATGCT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGAGGCATGTTTGTTaGCATTGTTTGAGAACTTGT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSWRHVC*HCLRTC
Trigger: ACAAGTTCTCAAACAATGCCAACAAACATGCCTCCA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATTGGAGGCATGTTTGTTaGCATTGTTTGAGAACTTGT +
Preference number: 4 (lower is better)
Translates to: CTEWQVLMVGQEFTAVENWRHVC*HCLRTC
Trigger: ACAAGTTCTCAAACAATGCCAACAAACATGCCTCCA...ATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGGAATGTCTGCCTGCTaGGTTGTACCTGAAGCCATG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFGMSAC*VVPEAM
Trigger: CATGGCTTCAGGTACAACCCAGCAGGCAGACATTCC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAAGAGTTCTGCTGTCTaGGAATGTCTGCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFKSSAV*ECLPAG
Trigger: CCCAGCAGGCAGACATTCCCAGACAGCAGAACTCTT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGCATTTCAGCAGATaGAAAAATGAAGGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSWHFSR*KNEGGK
Trigger: TTTGCCACCTTCATTTTTCCATCTGCTGAAATGCCA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp CACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGTGCTCTGGCATTAGCAACTaGGTCAGTCCCAATAGTAAA +
Preference number: 4 (lower is better)
Translates to: HSRGKFYHPNLGLCGNVCSGISN*VSPNSK
Trigger: TTTACTATTGGGACTGACCCAGTTGCTAATGCCAGA...GCACACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGAACAGGATGGCTTGCTaGTCTAAAAAGCTTGAAATC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELNRMAC*SKKLEI
Trigger: GATTTCAAGCTTTTTAGATCAGCAAGCCATCCTGTT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGAAATGTGGAATTTTTaGTGGATCGAATTCCATTGG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSEMWNF*WIEFHW
Trigger: CCAATGGAATTCGATCCATCAAAAATTCCACATTTC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTACAGTTACTGCAACCTaGGTTTGGGCCAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFTVTAT*VWANSS
Trigger: GGAACTGTTGGCCCAAACTCAGGTTGCAGTAACTGT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCTTCTTCGAGCATCCTaGTTGCTGTCAACAAACATA +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQALLRAS*LLSTNI
Trigger: TATGTTTGTTGACAGCAATCAGGATGCTCGAAGAAG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GCTTCTGGCATTAGCAACTGGGTCAGTCCCAATAGTAAATCACTAACAAAAAGTTCTTCAGAATGTTGCTaGCCATCATGGGAGCAGCAA +
Preference number: 4 (lower is better)
Translates to: ASGISNWVSPNSKSLTKSSSECC*PSWEQQ
Trigger: TTGCTGCTCCCATGATGGTCAGCAACATTCTGAAGA...ACTTTTTGTTAGTGATTTACTATTGGGACTGACCCAGTTGCTAATGCCAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGAACCAGTATTACAGTaGCCAGGTAACTCGGCATGG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFEPVLQ*PGNSAW
Trigger: CCATGCCGAGTTACCTGGTCACTGTAATACTGGTTC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGTAGTTAAAAGCCTCTaGGGAAAGAGTCTAAACATT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSVVKSL*GKSLNI
Trigger: AATGTTTAGACTCTTTCCTCAGAGGCTTTTAACTAC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCATGTTTTCCTTGAACTaGTGCAGCAGCAATGCCATT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAMFSLN*CSSNAI
Trigger: AATGGCATTGCTGCTGCAGCAGTTCAAGGAAAACAT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTGCCGGGATGGTCCTTaGTCCCTAGTAGAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCCRDGP*SLVEVP
Trigger: TGGCACTTCTACTAGGGAGCAAGGACCATCCCGGCA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp ACATTAAGAGGGCCACGGCAACCAGACCTCTATTGCTATGATTGGGTGGTAGAGTACTCTGCATTTCAGTaGATCAGTCTTAAACATGAT +
Preference number: 4 (lower is better)
Translates to: TLRGPRQPDLYCYDWVVEYSAFQ*ISLKHD
Trigger: ATCATGTTTAAGACTGATGCACTGAAATGCAGAGTA...CTCTACCACCCAATCATAGCAATAGAGGTCTGGTTGCCGTGGCCCTCTTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTAGTTGTGCAGCACAGTaGTGGCTGGCCTCTGCTAAC +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCSCAAQ*WLASAN
Trigger: GTTAGCAGAGGCCAGCCAGCACTGTGCTGCACAACT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCCATCACAGTCAAGGTaGCTTCAAATTCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAPSQSR*LQILLQ
Trigger: TTGAAGGAGAATTTGAAGCCACCTTGACTGTGATGG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCTCTTTCTACTAATTTaGAATCAGAAGCTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLFLLI*NQKLAK
Trigger: CTTTGCCAGCTTCTGATTCCAAATTAGTAGAAAGAG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCGGAGTGCAGTCTCTATaGAAGAGTTTTCATTGGCAT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAGVQSL*KSFHWH
Trigger: ATGCCAATGAAAACTCTTCCATAGAGACTGCACTCC...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGATGAGTTGAGTAATTaGAAAGCTGCAATGTTTCAC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSDELSN*KAAMFH
Trigger: GTGAAACATTGCAGCTTTCCAATTACTCAACTCATC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGATTCCATGCGAGGATaGGGGAGGAGTTGGAACAAA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFDSMRG*GRSWNK
Trigger: TTTGTTCCAACTCCTCCCCCATCCTCGCATGGAATC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGTCAAGAGTTCCATGTaGACTAGCAAAACTGGCCCC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFVKSSM*TSKTGP
Trigger: GGGGCCAGTTTTGCTAGTCCACATGGAACTCTTGAC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGAAGGAATCTCTCAAGTaGAGAACAAAGGTAACTACC +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELKESLK*RTKVTT
Trigger: GGTAGTTACCTTTGTTCTCCACTTGAGAGATTCCTT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp CGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGTGCTATAAATTTAGCTGTGTTGCTTaGTCAGGGAACAGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RGKFYHPNLGLCGNVCYKFSCVA*SGNSSS
Trigger: GCTGGAGCTGTTCCCTGACCAAGCAACACAGCTAAA...TTTATAGCACACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp ATTCACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGATACTAACAGGTTCTTaGGGAGGGACCGATGTTTTC +
Preference number: 4 (lower is better)
Translates to: IHSRGKFYHPNLGLCGNVILTGS*GGTDVF
Trigger: GAAAACATCGGTCCCTCCCCAAGAACCTGTTAGTAT...CACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTATCTGTCAGCCTTCCTaGTTTAAAAACAATAGTGTC +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSICQPS*FKNNSV
Trigger: GACACTATTGTTTTTAAACCAGGAAGGCTGACAGAT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTATACCATGGAGTTCCTaGAGTTGTGCAGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFIPWSS*SCAAQC
Trigger: GCACTGTGCTGCACAACTCCAGGAACTCCATGGTAT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCTAGACTGCACCAGTTaGTGGATGAAGCTGATTTGC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFLDCTS*WMKLIC
Trigger: GCAAATCAGCTTCATCCATCAACTGGTGCAGTCTAG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCTCCCAAGAACCTGTTaGTTCCAAACTGAAAGGGAG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFLPRTC*FQTERE
Trigger: CTCCCTTTCAGTTTGGAATCAACAGGTTCTTGGGAG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCTCCAATAGGATGAGTTaGGTAATTGGAAAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQASNRMS*VIGKLQ
Trigger: TTGCAGCTTTCCAATTACTCAACTCATCCTATTGGA...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCAGTGGGGAGTTTGTTaGTGGCATTTAATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFQWGVC*WHLMEP
Trigger: AGGCTCCATTAAATGCCATCAACAAACTCCCCACTG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AACCTAGGTCTTTGTGGCAATGTGTGCTATAAATACAAGCTTCTGGCATTAGCATCGTCTCATGATGACTaGTCCAAGGAATCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: NLGLCGNVCYKYKLLALASSHDD*SKESLK
Trigger: CTTGAGAGATTCCTTGGATCAGTCATCATGAGACGA...TGCTAATGCCAGAAGCTTGTATTTATAGCACACATTGCCACAAAGACCTAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCCAAATCCTATATATTaGAAGACAACCAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELPNPIY*KTTKVL
Trigger: TAGCACCTTGGTTGTCTTTCAATATATAGGATTTGG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCTTAGATTGCCAAACTaGTGTGATTACCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQALRLPN*CDYHCK
Trigger: CTTACAGTGGTAATCACATCAGTTTGGCAATCTAAG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCAGCAGATGGAAAAATaGAGGTGGCAAATCAGGACC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFQQMEK*RWQIRT
Trigger: GGTCCTGATTTGCCACCTTCATTTTTCCATCTGCTG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGATCATCAGACAACTTaGGCTTGGCATTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFDHQTT*AWHWFW
Trigger: CCAGAACCAATGCCAAGCGCAAGTTGTCTGATGATC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTACTCTGCATTTCAGTaGATCAGTCTTAAACATGAT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSYSAFQ*ISLKHD
Trigger: ATCATGTTTAAGACTGATGCACTGAAATGCAGAGTA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTTTGGTAATTGGGTCTaGAGGAATAATTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELFGNWV*RNNFVP
Trigger: AGGGACAAAATTATTCCTCCAGACCCAATTACCAAA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCCATGTCATCCAGAGTaGCCTGGTCAAGTCCATAAA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFPCHPE*PGQVHK
Trigger: TTTATGGACTTGACCAGGCCACTCTGGATGACATGG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTACTTGCGCTTGGCATTaGTTCTGGTCTGTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCTCAWH*FWSVSR
Trigger: CCGGGAAACAGACCAGAACCAATGCCAAGCGCAAGT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTTTCTTGGATTCTACTaGACATGGATCATCAGACAA +
Preference number: 4 (lower is better)
Translates to: KWRQLAENCEHTMEFLELFLGFY*TWIIRQ
Trigger: TTGTCTGATGATCCATGTCCAGTAGAATCCAAGAAA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCACATAGCGACGAAGTaGGCTAAAACTTTATTGAAG +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAHIATK*AKTLLK
Trigger: CTTCAATAAAGTTTTAGCCCACTTCGTCGCTATGTG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGTGGAATCTCCAGATTaGACAACTCCAACCGAAGTC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFVESPD*TTPTEV
Trigger: GACTTCGGTTGGAGTTGTCCAATCTGGAGATTCCAC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCCAGGTAACTCGGCATaGTATTATCACTTAAAAATT +
Preference number: 4 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSPGNSA*YYHLKI
Trigger: AATTTTTAAGTGATAATACCATGCCGAGTTACCTGG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAAATCACTGGCCACTTaGAAGTGGAGGCAACTTGCA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFKSLAT*KWRQLA
Trigger: TGCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TGGGTCAGTCCCAATAGTAAATCACTAACAAAAAGTCCAGGCAGCAGAGAAATGTCATGTACCTTGTCGTaGTGGATTCATCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: WVSPNSKSLTKSPGSREMSCTLS*WIHLCK
Trigger: TTTGCAGAGATGAATCCACCACGACAAGGTACATGA...CATTTCTCTGCTGCCTGGACTTTTTGTTAGTGATTTACTATTGGGACTGACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433003.1
3UTR CAA 72 bp CCCCTTCTTAGCAGTTTGATCTTAAGCAACCTTAATTaGATCTCAGGCAAATTACATTTCTCTGGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PLLSSLILSNLN*ISGKLHFSGPP
Trigger: TGGAGGCCCAGAGAAATGTAATTTGCCTGAGATCAAATTAAGGTTGCTTAAGATCAAACTGCTAAGAAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTAGGCACTTTCCAGCATaGTACCTTTCCACCTGCACA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCRHFPA*YLSTCT
Trigger: TGTGCAGGTGGAAAGGTATCATGCTGGAAAGTGCCT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTGGAGAATGGTATTGTaGCAGTTACTGCAACCTGAG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFWRMVL*QLLQPE
Trigger: CTCAGGTTGCAGTAACTGTCACAATACCATTCTCCA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCAGTACCTGTAATAACTaGACCACATTTGGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQASTCNN*TTFGVL
Trigger: CAAAACACCAAATGTGGTTCAGTTATTACAGGTACT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp AACATGCATTTCAACTTTGTGATGTACAGAGTGGCAGGTATTGATGGTAGGGCAATCGTCAGGCAAAACTaGACATTCCATTTTAGCTGT +
Preference number: 4 (lower is better)
Translates to: NMHFNFVMYRVAGIDGRAIVRQN*TFHFSC
Trigger: ACAGCTAAAATGGAATGTTCAGTTTTGCCTGACGAT...TGCCCTACCATCAATACCTGCCACTCTGTACATCACAAAGTTGAAATGCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCTGCTGGGTTGTACCTaGAGCCATGTCATAAATGAT +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFLLGCT*SHVIND
Trigger: ATCATTTATGACATGGCTTCAGGTACAACCCAGCAG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTTAGTCAACTGCTCCTaGACAGTGGCAGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCLVNCS*TVAELG
Trigger: ACCCAACTCTGCCACTGTTCAGGAGCAGTTGACTAA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTCCTGATGTTCCTGGCTaGTTTGGAAATGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCPDVPG*FGNGCC
Trigger: GCAACAGCCATTTCCAAAGCAGCCAGGAACATCAGG...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTCCAGCTTCATAATGTaGACACAATCCCTGAGGATG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFSSFIM*TQSLRM
Trigger: CATCCTCAGGGATTGTGTGCACATTATGAAGCTGGA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp ATTCACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGTGGTGGATTCATCTCTaGAAACCTCTTCAGAATGTT +
Preference number: 4 (lower is better)
Translates to: IHSRGKFYHPNLGLCGNVWWIHL*KPLQNV
Trigger: AACATTCTGAAGAGGTTTGCAGAGATGAATCCACCA...CACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCAGCTGCAAATATTGTaGATTCACCTTGTCGTGGTG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFQLQIL*IHLVVV
Trigger: CACCACGACAAGGTGAATGCACAATATTTGCAGCTG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTGCTGGGGTGGTGGCTaGAGCTGCGATATTAAAGAA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCCWGGG*SCDIKE
Trigger: TTCTTTAATATCGCAGCTCCAGCCACCACCCCAGCA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCATTAGCTTTAAATGGTaGTCCTGCAACTCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAISFKW*SCNSCF
Trigger: GAAACAAGAGTTGCAGGACCACCATTTAAAGCTAAT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTTCACCTTGTCGTGGTaGATTCATCTCTGCAAACCT +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFFTLSW*IHLCKP
Trigger: AGGTTTGCAGAGATGAATCCACCACGACAAGGTGAA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGTAAGATTTGCTAACTaGGGAGGAAGATCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFVRFAN*GGRSVV
Trigger: AACCACAGATCTTCCTCCTCAGTTAGCAAATCTTAC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTATGTTCAAGGCACTGTaGGTGAGGATGGTAGGTATG +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCMFKAL*VRMVGM
Trigger: CATACCTACCATCCTCACTCACAGTGCCTTGAACAT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGCTGTCTTCACGATCTaGAGCATTCACAGACATAAA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFAVFTI*SIHRHK
Trigger: TTTATGTCTGTGAATGCTGCAGATCGTGAAGACAGC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTACTCTGCTACCCAAGTaGGGTTATTTCTACCTTGTA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFTLLPK*GYFYLV
Trigger: TACAAGGTAGAAATAACCGCACTTGGGTAGCAGAGT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAGGTTTCCACTGTCCTaGATTTTCAGGTGTCACTTT +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFRFPLS*IFRCHF
Trigger: AAAGTGACACCTGAAAATGCAGGACAGTGGAAACCT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTCGGTAGAAGACCTTTaGATCAGACCATGTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFSVEDL*IRPCSL
Trigger: CAAAGAACATGGTCTGATGCAAAGGTCTTCTACCGA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp GGAATTCACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATCTTTGTGGCAATGTGTaGTATAAATACAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GIHSRGKFYHPNLGLCGNLCGNV*YKYKLL
Trigger: CAGAAGCTTGTATTTATAGCACACATTGCCACAAAG...ATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTGAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGCTTGGCATTGGTTCTaGTCTGTTTCCCGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCAWHWF*SVSRFL
Trigger: CAAAAACCGGGAAACAGACCAGAACCAATGCCAAGC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCAAATTACATTTCTCTaGGCCTCCATTTACTCATTT +
Preference number: 4 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAQITFL*ASIYSF
Trigger: AAATGAGTAAATGGAGGCCCAGAGAAATGTAATTTG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTCGTCTCATGATGACTaGTCCAAGGAATCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCSSHDD*SKESLK
Trigger: CTTGAGAGATTCCTTGGATCAGTCATCATGAGACGA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAGAAGGCTTCAACTCTaGTTGAAAATGAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFRRLQL*LKMSGE
Trigger: TTCTCCACTCATTTTCAATCAGAGTTGAAGCCTTCT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGTCCGGCTAGCAAACTaGACTATTTCTATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFVRLAN*TISIFL
Trigger: AAGGAAAATAGAAATAGTGCAGTTTGCTAGCCGGAC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTCAGCTGATGGAGTGTaGCTTGTTTTTCAATTTTGG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFSADGV*LVFQFW
Trigger: CCAAAATTGAAAAACAAGCCACACTCCATCAGCTGA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAGTGGTCGATCTTCATaGCTCTTTCTACTAATTTGG +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFSGRSS*LFLLIW
Trigger: CCAAATTAGTAGAAAGAGCCATGAAGATCGACCACT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGCATTCACCTTGTCGTaGTGGATTCATCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCAFTLS*WIHLCK
Trigger: TTTGCAGAGATGAATCCACCACGACAAGGTGAATGC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR TCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTCAGTTGTACATATCCTaGAGAGGTTTCTCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCQLYIS*RGFSSA
Trigger: TGCTGATGAGAAACCTCTTCAGGATATGTACAACTG...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTCTTGTAATCGGAAAGTaGAATCAAGAAGAGAGCGGT +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCLVIGK*NQEESG
Trigger: ACCGCTCTCTTCTTGATTGCACTTTCCGATTACAAG...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTATTGTGACAGTTACTaGAACCTGAGTTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCYCDSY*NLSLGQ
Trigger: TTGGCCCAAACTCAGGTTGCAGTAACTGTCACAATA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAGAGTGTCCACTGAATaGATCATGTGTAAAAATGCA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFRVSTE*IMCKNA
Trigger: TGCATTTTTACACATGATGCATTCAGTGGACACTCT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTTTGGAATCAGAAGCTaGCAAAGGAGGATCGTGAAA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCFGIRS*QRRIVK
Trigger: TTTCACGATCCTCCTTTGCCAGCTTCTGATTCCAAA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTTGCACTCCTTGATGTaGAATCTCCAGATTGGACAA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCLHSLM*NLQIGQ
Trigger: TTGTCCAATCTGGAGATTCCACATCAAGGAGTGCAA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp CGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGTGCTATAAAATTAGCTTTAAATGGTaGTCCTGCAACTCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RGKFYHPNLGLCGNVCYKISFKW*SCNSCF
Trigger: GAAACAAGAGTTGCAGGACCACCATTTAAAGCTAAT...TTTATAGCACACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR TCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTCAAATAGAAAAGGGCTaGCCCTTGATAAAGACATCT +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCQIEKG*PLIKTS
Trigger: AGATGTCTTTATCAAGGGTCAGCCCTTTTCTATTTG...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTAACTTTGTGAACAGATaGTGTTCCAGTTTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCNFVNR*CSSFSP
Trigger: GGGAGAAAAACTGGAACAGCATCTGTTCACAAAGTT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTAGATGTTTTATAGACTaGTTGCAACGCTGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCRCFID*LQRCCP
Trigger: TGGACAACAGCGTTGCAAGCAGTCTATAAAACATCT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAAAGACATCTTAGATTaGCAAACTGATGTGATTACC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFKDILD*QTDVIT
Trigger: GGTAATCACATCAGTTTGGCAATCTAAGATGTCTTT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGAAATATTAAGAAAATaGCTAGCACACAGTAAGCTC +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFEILRK*LAHSKL
Trigger: GAGCTTACTGTGTGCTAGGCATTTTCTTAATATTTC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAACAATGTAGTATTGTaGAAGGCGGGTAAGTTTAAT +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFNNVVL*KAGKFN
Trigger: ATTAAACTTACCCGCCTTCCACAATACTACATTGTT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTCGTATTAGCTTTAAATaGTGGTCCTGCAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCRISFK*WSCNSC
Trigger: ACAAGAGTTGCAGGACCACCATTTAAAGCTAATACG...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGCTGTTAGTATCCTTTaGCTGAACAGATTACTGTGT +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCAVSIL*LNRLLC
Trigger: ACACAGTAATCTGTTCAGCCAAAGGATACTAACAGC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAATAACCTACCACATTaGGTTGTTGTGAGGATTAAA +
Preference number: 4 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFNNLPH*VVVRIK
Trigger: TTTAATCCTCACAACAACCCAATGTGGTAGGTTATT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR GCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTTCGAGCATCCTGATTaGTGTCAACAAACATATTCA +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCFEHPD*CQQTYS
Trigger: TGAATATGTTTGTTGACAGCAATCAGGATGCTCGAA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
3UTR CAA 72 bp AAAAGCAAATTTTGCGCACTGAATCCTATCTTACTCTaGATTGGCACAATGCATTCAGAGATGAGTTATAAT +
Preference number: 4 (lower is better)
Translates to: KSKFCALNPILL*IGTMHSEMSYN
Trigger: ATTATAACTCATCTCTGAATGCATTGTGCCAATCAAGAGTAAGATAGGATTCAGTGCGCAAAATTTGCTTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CCA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTATCTTACTCTTGATTaGCACAATGCATTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LNIASLGCVYNNSQNISCYLTLD*HNAFRD
Trigger: ATCTCTGAATGCATTGTGCCAATCAAGAGTAAGATA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 90 bp GGGGCCATGGCGGCGCAGGACCGGGCTTGGCGCAACGGCACACGATaGGGTCCTCGAGCCTCCCGGGCGCTCGGTCACCGCGCCGAAACG +
Preference number: 5 (lower is better)
Translates to: GAMAAQDRAWRNGTR*GPRASRALGHRAET
Trigger: CGTTTCGGCGCGGTGACCGAGCGCCCGGGAGGCTCGAGGACCGCATCGTGTGCCGTTGCGCCAAGCCCGGTCCTGCGCCGCCATGGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 90 bp GCCGCCGCCTCCGGGCGGGACCAGCTGGTGGTTCTCCAGCTGCACTaGGGCCATGGCGGCGCAGGACCGGGCTTGGCGCAACGGCACACG +
Preference number: 5 (lower is better)
Translates to: AAASGRDQLVVLQLH*GHGGAGPGLAQRHT
Trigger: CGTGTGCCGTTGCGCCAAGCCCGGTCCTGCGCCGCCATGGCCCCAGTGCAGCTGGAGAACCACCAGCTGGTCCCGCCCGGAGGCGGCGGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 90 bp CTCCGGGCGGGACCAGCTGGTGGTTCTCCAGCTGCACTGGGGCCATaGCGGCGCAGGACCGGGCTTGGCGCAACGGCACACGATGCGGTC +
Preference number: 5 (lower is better)
Translates to: LRAGPAGGSPAALGP*RRRTGLGATAHDAV
Trigger: GACCGCATCGTGTGCCGTTGCGCCAAGCCCGGTCCTGCGCCGCCATGGCCCCAGTGCAGCTGGAGAACCACCAGCTGGTCCCGCCCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 90 bp TCAGCACCACAGCAGGCGTCCCAGGAGGTGCAATCGGCGGCGCGCTaGGAGGGATCGTCAGGCAAAACTGAACATTCCATTTTAGCTGTG +
Preference number: 5 (lower is better)
Translates to: SAPQQASQEVQSAAR*EGSSGKTEHSILAV
Trigger: CACAGCTAAAATGGAATGTTCAGTTTTGCCTGACGATCCCTCCCAGCGCGCCGCCGATTGCACCTCCTGGGACGCCTGCTGTGGTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
CDS TCA 90 bp GGAGGTGCAATCGGCGGCGCGCTGGGAGGGATCGTCAGGCAAAACTaGACATTCCATTTTAGCTGTGTTGCTTGGTCAGGGAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: GGAIGGALGGIVRQN*TFHFSCVAWSGNSS
Trigger: GGAGCTGTTCCCTGACCAAGCAACACAGCTAAAATGGAATGTTCAGTTTTGCCTGACGATCCCTCCCAGCGCGCCGCCGATTGCACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGGCGCAGGACCGGGCTaGGCGCAACGGCACACGATG +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELGAGPG*AQRHTM
Trigger: CATCGTGTGCCGTTGCGCCAAGCCCGGTCCTGCGCC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 90 bp GGGTGGACGACTGTGGCAGAATGGAGAAGCACTGGTAGGCAGTATTaGTTCTCTGGGTCAAGCCCAACATCGGCACAGTGGGGAGTTTGT +
Preference number: 5 (lower is better)
Translates to: GWTTVAEWRSTGRQY*FSGSSPTSAQWGVC
Trigger: ACAAACTCCCCACTGTGCCGATGTTGGGCTTGACCCAGAGAACCAATACTGCCTACCAGTGCTTCTCCATTCTGCCACAGTCGTCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 90 bp AGACACTTGAGGAGATCCTGGCCAGTTCCCTGCTCGTCCACTTGGTaGCACCATAGTGTATGGGGAACTAGGGTCAAGAGTTCCATGTGG +
Preference number: 5 (lower is better)
Translates to: RHLRRSWPVPCSSTW*HHSVWGTRVKSSMW
Trigger: CCACATGGAACTCTTGACCCTAGTTCCCCATACACTATGGTGTCACCAAGTGGACGAGCAGGGAACTGGCCAGGATCTCCTCAAGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 90 bp GCAATACATGTTCCTGAAGGCCAGTCTGATGTGGGTGGACGACTGTaGCAGAATGGAGAAGCACTGGTAGGCAGTATTGGTTCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: AIHVPEGQSDVGGRL*QNGEALVGSIGSLG
Trigger: ACCCAGAGAACCAATACTGCCTACCAGTGCTTCTCCATTCTGCCACAGTCGTCCACCCACATCAGACTGGCCTTCAGGAACATGTATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTAGGCACCATCCCGTATaGCCACAACACCTCGACTCC +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSRHHPV*PQHLDS
Trigger: GGAGTCGAGGTGTTGTGGCAATACGGGATGGTGCCT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 90 bp TTCAGAATGTTGCTGACCATCATGGGAGCAGCAACAGAAGAGTTCTaGTGTCTGGGAATGTCTGCCTGCTGGGTTGTACCTGAAGCCATG +
Preference number: 5 (lower is better)
Translates to: FRMLLTIMGAATEEF*CLGMSACWVVPEAM
Trigger: CATGGCTTCAGGTACAACCCAGCAGGCAGACATTCCCAGACAGCAGAACTCTTCTGTTGCTGCTCCCATGATGGTCAGCAACATTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGCAGCAGCAATGCCATaGCAGGGCTGTCTTCACGAT +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSAAAMP*QGCLHD
Trigger: ATCGTGAAGACAGCCCTGCAATGGCATTGCTGCTGC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCTTTGGAAATGGCTGTaGCTGGGGTGGTGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELLWKWL*LGWWLE
Trigger: CTCCAGCCACCACCCCAGCAACAGCCATTTCCAAAG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTATGGAGTTCCTGGAGTaGTGCAGCACAGTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSMEFLE*CSTVLA
Trigger: AGCCAGCACTGTGCTGCACAACTCCAGGAACTCCAT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGAATGTAGTGAGGGGTaGGCTGGTGACATTCCAGGC +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELECSEG*AGDIPG
Trigger: GCCTGGAATGTCACCAGCCAACCCCTCACTACATTC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp ATGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATGTCTGCCTGCTGGGTaGTACCTGAAGCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: MYRVAGIDGRAGIHSRGKCLPAG*YLKPCH
Trigger: ATGACATGGCTTCAGGTACAACCCAGCAGGCAGACA...TTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS TCA 90 bp AAGCGAATTGCATGGCTGAAGCCATCACCTTCCACTTGCACTCCTTaGTGTGGAATCTCCAGATTGGACAACTCCAACCGAAGTCCTACA +
Preference number: 5 (lower is better)
Translates to: KRIAWLKPSPSTCTP*CGISRLDNSNRSPT
Trigger: TGTAGGACTTCGGTTGGAGTTGTCCAATCTGGAGATTCCACATCAAGGAGTGCAAGTGGAAGGTGATGGCTTCAGCCATGCAATTCGCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCCACATCAGATTTCCTaGGCAGTAGGTCCGTCAACA +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSPHQIS*AVGPST
Trigger: TGTTGACGGACCTACTGCCAAGGAAATCTGATGTGG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGGATCATCAGACAACTaGCGCTTGGCATTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSGSSDN*RLALVL
Trigger: CAGAACCAATGCCAAGCGCAAGTTGTCTGATGATCC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTACTGCAACCTGAGTTaGGGCCAACAGTTCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSYCNLS*GQQFPK
Trigger: CTTTGGGAACTGTTGGCCCAAACTCAGGTTGCAGTA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCTGGCCCCTGGTCCTATaGAGATTCCATGCGAGGATG +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAWPLVL*RFHARM
Trigger: CATCCTCGCATGGAATCTCAATAGGACCAGGGGCCA...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp CAGACATTAAGAGGGCCACGGCAACCAGACCTCTATTGCTATGATTGGGTGGTATCCATTTTAGCTGTGTaGCTTGGTCAGGGAACAGCT +
Preference number: 5 (lower is better)
Translates to: QTLRGPRQPDLYCYDWVVSILAV*LGQGTA
Trigger: AGCTGTTCCCTGACCAAGCAACACAGCTAAAATGGA...TACCACCCAATCATAGCAATAGAGGTCTGGTTGCCGTGGCCCTCTTAATGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS GCA 90 bp GAACTGCTGCAGCAGCAATGCCATTGCAGGGCTGTCTTCACGATCTaGAGCATTCACAGACATAAAGTAGTACTTGTACGACAGTTGTGT +
Preference number: 5 (lower is better)
Translates to: ELLQQQCHCRAVFTI*SIHRHKVVLVRQLC
Trigger: ACACAACTGTCGTACAAGTACTACTTTATGTCTGTGAATGCTGCAGATCGTGAAGACAGCCCTGCAATGGCATTGCTGCTGCAGCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 90 bp ACTCTGCTACCCAAGTGCGGTTATTTCTACCTTGTAATCGGAAAGTaGAATCAAGAAGAGAGCGGTCCAGAGCCTTTTGGGTTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: TLLPKCGYFYLVIGK*NQEESGPEPFGFPQ
Trigger: CTGAGGAAACCCAAAAGGCTCTGGACCGCTCTCTTCTTGATTGCACTTTCCGATTACAAGGTAGAAATAACCGCACTTGGGTAGCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 90 bp AATTGCATGGCTGAAGCCATCACCTTCCACTTGCACTCCTTGATGTaGAATCTCCAGATTGGACAACTCCAACCGAAGTCCTACAAATGG +
Preference number: 5 (lower is better)
Translates to: NCMAEAITFHLHSLM*NLQIGQLQPKSYKW
Trigger: CCATTTGTAGGACTTCGGTTGGAGTTGTCCAATCTGGAGATTCCACATCAAGGAGTGCAAGTGGAAGGTGATGGCTTCAGCCATGCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTAATGGCCTTCAGTTCTaGGAGCTTCTGATGAGCTCT +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSNGLQF*ELLMSS
Trigger: AGAGCTCATCAGAAGCTCCAAGAACTGAAGGCCATT...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTCTGCTTGCAACGCTGTaGTCCAAGCCAAAACTTAAG +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSLLATL*SKPKLK
Trigger: CTTAAGTTTTGGCTTGGACAACAGCGTTGCAAGCAG...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAATTCACAGCCGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGAATGTAGTGAGGGGTaGGCTGGTGACATTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GIHSRGKFYHPNLGLCGNECSEG*AGDIPG
Trigger: GCCTGGAATGTCACCAGCCAACCCCTCACTACATTC...ATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACGGCTGTGAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp TGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATGCATTGTTTGAGAACTaGTTCCAGCTCGAGGGGAAT +
Preference number: 5 (lower is better)
Translates to: CTEWQVLMVGQEFTAVENALFEN*FQLEGN
Trigger: ATTCCCCTCGAGCTGGAACAAGTTCTCAAACAATGC...ATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp TGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATAGCGTTTGGTTGGTTTaGGGACTAAGAGCTACTCTG +
Preference number: 5 (lower is better)
Translates to: CTEWQVLMVGQEFTAVENSVWLV*GLRATL
Trigger: CAGAGTAGCTCTTAGTCCCAAAACCAACCAAACGCT...ATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTCCATTTTAGCTGTGTaGCTTGGTCAGGGAACAGCT +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSSILAV*LGQGTA
Trigger: AGCTGTTCCCTGACCAAGCAACACAGCTAAAATGGA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATAACCTCTTCAGAATGTaGCTGACCATCATGGGAGCA +
Preference number: 5 (lower is better)
Translates to: CTEWQVLMVGQEFTAVENNLFRM*LTIMGA
Trigger: TGCTCCCATGATGGTCAGCAACATTCTGAAGAGGTT...ATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp TGTACAGAGTGGCAGGTATTGATGGTAGGGCAGGAATTCACAGCCGTGGAAAATTACTGGTCATGTACCTaGTCGTGGTGGATTCATCTC +
Preference number: 5 (lower is better)
Translates to: CTEWQVLMVGQEFTAVENYWSCT*SWWIHL
Trigger: GAGATGAATCCACCACGACAAGGTACATGACCAGTA...ATTTTCCACGGCTGTGAATTCCTGCCCTACCATCAATACCTGCCACTCTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS TCA 90 bp TGGTTCTCTGGGTCAAGCCCAACATCGGCACAGTGGGGAGTTTGTTaGTGGCATTTAATGGAGCCTGAGTATCAAACAGTACCTGTAATA +
Preference number: 5 (lower is better)
Translates to: WFSGSSPTSAQWGVC*WHLMEPEYQTVPVI
Trigger: TATTACAGGTACTGTTTGATACTCAGGCTCCATTAAATGCCATCAACAAACTCCCCACTGTGCCGATGTTGGGCTTGACCCAGAGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 90 bp CAAGTCCTGAATGTTTTCCTTGAACTGCTGCAGCAGCAATGCCATTaGAGGGCTGTCTTCACGATCTGCAGCATTCACAGACATAAAGTA +
Preference number: 5 (lower is better)
Translates to: QVLNVFLELLQQQCH*RAVFTICSIHRHKV
Trigger: TACTTTATGTCTGTGAATGCTGCAGATCGTGAAGACAGCCCTGCAATGGCATTGCTGCTGCAGCAGTTCAAGGAAAACATTCAGGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 90 bp AAAAACCAAGTCCTGAATGTTTTCCTTGAACTGCTGCAGCAGCAATaGCATTGCAGGGCTGTCTTCACGATCTGCAGCATTCACAGACAT +
Preference number: 5 (lower is better)
Translates to: KNQVLNVFLELLQQQ*HCRAVFTICSIHRH
Trigger: ATGTCTGTGAATGCTGCAGATCGTGAAGACAGCCCTGCAATGGCATTGCTGCTGCAGCAGTTCAAGGAAAACATTCAGGACTTGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCCTAGACTGCACCAGTaGATGGATGAAGCTGATTTG +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELPRLHQ*MDEADL
Trigger: CAAATCAGCTTCATCCATCAACTGGTGCAGTCTAGG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGTGTGGAATCTCCAGATaGGACAACTCCAACCGAAGT +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELCGISR*DNSNRS
Trigger: ACTTCGGTTGGAGTTGTCCAATCTGGAGATTCCACA...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGACAGTGGGGAGTTTGTaGATGGCATTTAATGGAGCC +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELTVGSL*MAFNGA
Trigger: GGCTCCATTAAATGCCATCAACAAACTCCCCACTGT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGGCACAGTGGGGAGTTaGTTGATGGCATTTAATGGA +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELGTVGS*LMAFNG
Trigger: TCCATTAAATGCCATCAACAAACTCCCCACTGTGCC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGTTTGTTGGCATTGTTaGAGAACTTGTTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSVCWHC*RTCSSS
Trigger: CGAGCTGGAACAAGTTCTCAAACAATGCCAACAAAC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp ACATTAAGAGGGCCACGGCAACCAGACCTCTATTGCTATGATTGGGTGGTAGAGGTGGTCCTGCAACTCTaGTTTCAAAGAATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: TLRGPRQPDLYCYDWVVEVVLQL*FQRISP
Trigger: TGGAGAAATTCTTTGAAACAAGAGTTGCAGGACCAC...CTCTACCACCCAATCATAGCAATAGAGGTCTGGTTGCCGTGGCCCTCTTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTGTCGGTAGAAGACCTTaGCATCAGACCATGTTCTTT +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSVGRRP*HQTMFF
Trigger: AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGAC...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 90 bp GGGGATTATCGTCCTCATTTACAGACCTTCTTCGAGCATCCTGATTaGTGTCAACAAACATATTCAGGAACGTCTTTAGTCCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GDYRPHLQTFFEHPD*CQQTYSGTSLVLVQ
Trigger: CTGCACCAGGACTAAAGACGTTCCTGAATATGTTTGTTGACAGCAATCAGGATGCTCGAAGAAGGTCTGTAAATGAGGACGATAATCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 90 bp AATATTGTCTACTGGTCATGTACCTTGTCGTGGTGGATTCATCTCTaGAAACCTCTTCAGAATGTTGCTGACCATCATGGGAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: NIVYWSCTLSWWIHL*KPLQNVADHHGSSN
Trigger: GTTGCTGCTCCCATGATGGTCAGCAACATTCTGAAGAGGTTTGCAGAGATGAATCCACCACGACAAGGTACATGACCAGTAGACAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS CCA 90 bp CTACAAAAATGTGCAGACACTCTGAATTACCACAGGGCTCCAAGATaGGAACAACAAGAGCTGGGAGTGCAGTCTCTATGGAAGAGTTTT +
Preference number: 5 (lower is better)
Translates to: LQKCADTLNYHRAPR*EQQELGVQSLWKSF
Trigger: AAAACTCTTCCATAGAGACTGCACTCCCAGCTCTTGTTGTTCCCATCTTGGAGCCCTGTGGTAATTCAGAGTGTCTGCACATTTTTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGAGTTTTCATTGGCATaGAAGCCTCTAAGAATGGCC +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELEFSLA*KPLRMA
Trigger: GGCCATTCTTAGAGGCTTCAATGCCAATGAAAACTC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGTACTTGTACGACAGTaGTGTGGGTTTATTGGGAAC +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELVLVRQ*CGFIGN
Trigger: GTTCCCAATAAACCCACACAACTGTCGTACAAGTAC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGTGCCGGGATGGTCCTaGCTCCCTAGTAGAAGTGCC +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCVPGWS*LPSRSA
Trigger: GGCACTTCTACTAGGGAGCAAGGACCATCCCGGCAC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAGGATGGGGGAGGAGTaGGAACAAATGACGCTGGTG +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFRMGEE*EQMTLV
Trigger: CACCAGCGTCATTTGTTCCAACTCCTCCCCCATCCT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCGAGGTGGAGGCATGTTaGTTGGCATTGTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAEVEAC*LALFEN
Trigger: GTTCTCAAACAATGCCAACAAACATGCCTCCACCTC...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCAGCGTTTGGTTGGTTTaGGGACTAAGAGCTACTCTG +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQASVWLV*GLRATL
Trigger: CAGAGTAGCTCTTAGTCCCAAAACCAACCAAACGCT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGAACAGCTGCAAATATaGTGCATTCACCTTGTCGTG +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELEQLQI*CIHLVV
Trigger: CACGACAAGGTGAATGCACAATATTTGCAGCTGTTC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCAGAACAATCCCAATTTaGGTGGGGAAGGAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQARTIPI*VGKERR
Trigger: CCTCCTTTCCTTCCCCACCAAAATTGGGATTGTTCT...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 90 bp GAAGGGGGATTATCGTCCTCATTTACAGACCTTCTTCGAGCATCCTaGTTGCTGTCAACAAACATATTCAGGAACGTCTTTAGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: EGGLSSSFTDLLRAS*LLSTNIFRNVFSPG
Trigger: ACCAGGACTAAAGACGTTCCTGAATATGTTTGTTGACAGCAATCAGGATGCTCGAAGAAGGTCTGTAAATGAGGACGATAATCCCCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGCACATTTTTCCACTTaGCCAGCATTATTAGCCCAT +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELAHFST*PALLAH
Trigger: ATGGGCTAATAATGCTGGCAAAGTGGAAAAATGTGC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGATGGATGAAGCTGATTaGCATGCTATGAACCAAAGC +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELMDEAD*HAMNQS
Trigger: GCTTTGGTTCATAGCATGCAAATCAGCTTCATCCAT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGCATGTTTGTTGGCATaGTTTGAGAACTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELACLLA*FENLFQ
Trigger: CTGGAACAAGTTCTCAAACAATGCCAACAAACATGC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTGTCTGCCTGCTGGGTaGTACCTGAAGCCATGTCAT +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFCLPAG*YLKPCH
Trigger: ATGACATGGCTTCAGGTACAACCCAGCAGGCAGACA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCTATTGTGCATTCACCTaGTCGTGGTGGATTCATCTC +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAYCAFT*SWWIHL
Trigger: GAGATGAATCCACCACGACAAGGTGAATGCACAATA...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTACCAAAAACTCCATTaGACCCTGGACAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFYQKLH*TLDRPR
Trigger: CCTGGGCCTGTCCAGGGTCAAATGGAGTTTTTGGTA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCAAATCACTGGCCACTaGGAAGTGGAGGCAACTTGC +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFQITGH*EVEATC
Trigger: GCAAGTTGCCTCCACTTCCAAGTGGCCAGTGATTTG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 90 bp TTATACCCTTACAGGGAGGAATTTTTAATAAGCGAATTGCATGGCTaGAGCCATCACCTTCCACTTGCACTCCTTGATGTGGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: LYPYREEFLISELHG*SHHLPLALLDVESP
Trigger: TGGAGATTCCACATCAAGGAGTGCAAGTGGAAGGTGATGGCTTCAGCCATGCAATTCGCTTATTAAAAATTCCTCCCTGTAAGGGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 90 bp AGAAGAGTTCTGCTGTCTGGGAATGTCTGCCTGCTGGGTTGTACCTaGAGCCATGTCATAAATGATTGGAACTATAATACTAACAGGTTC +
Preference number: 5 (lower is better)
Translates to: RRVLLSGNVCLLGCT*SHVINDWNYNTNRF
Trigger: GAACCTGTTAGTATTATAGTTCCAATCATTTATGACATGGCTTCAGGTACAACCCAGCAGGCAGACATTCCCAGACAGCAGAACTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGGCTTGTTTTTCAATTTaGGTAATTGGGTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELACFSI*VIGSGG
Trigger: TCCTCCAGACCCAATTACCAAAATTGAAAAACAAGC...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GGAAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTCAGGAGTTTTTCTATaGATAAGTGGTCGATCTTCA +
Preference number: 5 (lower is better)
Translates to: GSGGNLQKIVSIPWSSWSSGVFL*ISGRSS
Trigger: TGAAGATCGACCACTTATCAATAGAAAAACTCCTGA...ACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCACAACAATGTAGTATaGTGGAAGGCGGGTAAGTTT +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAHNNVV*WKAGKF
Trigger: AAACTTACCCGCCTTCCACAATACTACATTGTTGTG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTCAGACAACTTGCGCTaGGCATTGGTTCTGGTCTGT +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFSDNLR*ALVLVC
Trigger: ACAGACCAGAACCAATGCCAAGCGCAAGTTGTCTGA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GCTTCTGGCATTAGCAACTGGGTCAGTCCCAATAGTAAATCACTAACAAAAAGTGAGGTGGAGGCATGTTaGTTGGCATTGTTTGAGAAC +
Preference number: 5 (lower is better)
Translates to: ASGISNWVSPNSKSLTKSEVEAC*LALFEN
Trigger: GTTCTCAAACAATGCCAACAAACATGCCTCCACCTC...ACTTTTTGTTAGTGATTTACTATTGGGACTGACCCAGTTGCTAATGCCAGAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCAGCTGCAGCGTTTCTaGTTGAATAATTCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELQLQRF*LNNSLK
Trigger: CTTCAAAGAATTATTCAACAAGAAACGCTGCAGCTG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGAGATGGATGATCATTTaGATGAAAGAAGTGCACCCT +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELRWMII*MKEVHP
Trigger: AGGGTGCACTTCTTTCATCAAAATGATCATCCATCT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGCCCCTTCTTAGCAGTTaGATCTTAAGCAACCTTAAT +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELPLLSS*ILSNLN
Trigger: ATTAAGGTTGCTTAAGATCAAACTGCTAAGAAGGGG...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TATCATCCTAACCTAGGTCTTTGTGGCAATGTGTGCTATAAATACAAGCTTCTGACAGAGTGGCAGGTATaGATGGTAGGGCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: YHPNLGLCGNVCYKYKLLTEWQV*MVGQEF
Trigger: GAATTCCTGCCCTACCATCAATACCTGCCACTCTGT...CAGAAGCTTGTATTTATAGCACACATTGCCACAAAGACCTAGGTTAGGATGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS TCA 90 bp CAACCTGAGTTTGGGCCAACAGTTCCCAAAGAAATGTGGAATTTTTaGTGGATCGAATTCCATTGGATACTAATTGAGCTTCCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: QPEFGPTVPKEMWNF*WIEFHWILIELPLV
Trigger: CACCAAGGGAAGCTCAATTAGTATCCAATGGAATTCGATCCATCAAAAATTCCACATTTCTTTGGGAACTGTTGGCCCAAACTCAGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 90 bp AACGAGGCCAGGCGATCAGCAGTGTCCACAAACAGGATGGCTTGCTaGTCTAAAAAGCTTGAAATCATCTTTAAAGTAAAGGGTAAATGT +
Preference number: 5 (lower is better)
Translates to: NEARRSAVSTNRMAC*SKKLEIIFKVKGKC
Trigger: ACATTTACCCTTTACTTTAAAGATGATTTCAAGCTTTTTAGATCAGCAAGCCATCCTGTTTGTGGACACTGCTGATCGCCTGGCCTCGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492219.1
CDS GCA 90 bp GGGGATTATCGTCCTCATTTACAGACCTTCTTCGAGCATCCTGATTaGTGTCAACAAACATATTCAGGAACGTCTGTAATAACTGAACCA +
Preference number: 5 (lower is better)
Translates to: GDYRPHLQTFFEHPD*CQQTYSGTSVITEP
Trigger: TGGTTCAGTTATTACAGACGTTCCTGAATATGTTTGTTGACAGCAATCAGGATGCTCGAAGAAGGTCTGTAAATGAGGACGATAATCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496531.2
CDS CCA 90 bp TGTAATCGGAAAGTGCAATCAAGAAGAGAGCGGTCCAGAGCCTTTTaGGTTTCCTCAGTTATACCCTTACAGGGAGGAATTTTTAATAAG +
Preference number: 5 (lower is better)
Translates to: CNRKVQSRRERSRAF*VSSVIPLQGGIFNK
Trigger: CTTATTAAAAATTCCTCCCTGTAAGGGTATAACTGAGGAAACCCAAAAGGCTCTGGACCGCTCTCTTCTTGATTGCACTTTCCGATTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAGTTGTGTGGGTTTATaGGGAACCTCCAACATCTCC +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFSCVGL*GTSNIS
Trigger: GGAGATGTTGGAGGTTCCCAATAAACCCACACAACT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTAACTTGCGCTTGGCATaGGTTCTGGTCTGTTTCCCG +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCNLRLA*VLVCFP
Trigger: CGGGAAACAGACCAGAACCAATGCCAAGCGCAAGTT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCTTTCTCCTGCTCGTTTaGTTTTCTTGGATTCTACTG +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAFLLLV*FSWILL
Trigger: CAGTAGAATCCAAGAAAACAAAACGAGCAGGAGAAA...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGCGGTCCAGAGCCTTTaGGGTTTCCTCAGTTATACC +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCAVQSL*GFLSYT
Trigger: GGTATAACTGAGGAAACCCAAAAGGCTCTGGACCGC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp GCTTCTGGCATTAGCAACTGGGTCAGTCCCAATAGTAAATCACTAACAAAAAGTAATACTAACAGGTTCTaGGGGAGGGACCGATGTTTT +
Preference number: 5 (lower is better)
Translates to: ASGISNWVSPNSKSLTKSNTNRF*GRDRCF
Trigger: AAAACATCGGTCCCTCCCCAAGAACCTGTTAGTATT...ACTTTTTGTTAGTGATTTACTATTGGGACTGACCCAGTTGCTAATGCCAGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp AAGTGGAGGCAACTTGCAGAAAATTGTGAGCATACCATGGAGTTCCTGGAGTTGATGAGCTTTCTGAGCTaGGAAAACATGTCAAAATTG +
Preference number: 5 (lower is better)
Translates to: KWRQLAENCEHTMEFLELMSFLS*ENMSKL
Trigger: CAATTTTGACATGTTTTCCAAGCTCAGAAAGCTCAT...CAACTCCAGGAACTCCATGGTATGCTCACAATTTTCTGCAAGTTGCCTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 90 bp CGAAGTCCTACAAATGGCATATTTGTATCACACATAGCGACGAAGTaGGCTAAAACTTTATTGAAGGCACACATTTCTCCTGCTCGTTTT +
Preference number: 5 (lower is better)
Translates to: RSPTNGIFVSHIATK*AKTLLKAHISPARF
Trigger: AAAACGAGCAGGAGAAATGTGTGCCTTCAATAAAGTTTTAGCCCACTTCGTCGCTATGTGTGATACAAATATGCCATTTGTAGGACTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCCTGATGGAGTGTGGCTaGTTTTTCAATTTTGGTAAT +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQALMECG*FFNFGN
Trigger: ATTACCAAAATTGAAAAACAAGCCACACTCCATCAG...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGCCATCACCTTCCACTaGCACTCCTTGATGTGGAAT +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCAITFH*HSLMWN
Trigger: ATTCCACATCAAGGAGTGCAAGTGGAAGGTGATGGC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp CGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGTGCTATAAAGTTTGTTGGCATTGTTaGAGAACTTGTTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: RGKFYHPNLGLCGNVCYKVCWHC*RTCSSS
Trigger: CGAGCTGGAACAAGTTCTCAAACAATGCCAACAAAC...TTTATAGCACACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp AACCTAGGTCTTTGTGGCAATGTGTGCTATAAATACAAGCTTCTGGCATTAGCAGCATGTTTGTTGGCATaGTTTGAGAACTTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: NLGLCGNVCYKYKLLALAACLLA*FENLFQ
Trigger: CTGGAACAAGTTCTCAAACAATGCCAACAAACATGC...TGCTAATGCCAGAAGCTTGTATTTATAGCACACATTGCCACAAAGACCTAGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp AACTGGGTCAGTCCCAATAGTAAATCACTAACAAAAAGTCCAGGCAGCAGAGAACAGCTGCAGCGTTTCTaGTTGAATAATTCTTTGAAG +
Preference number: 5 (lower is better)
Translates to: NWVSPNSKSLTKSPGSREQLQRF*LNNSLK
Trigger: CTTCAAAGAATTATTCAACAAGAAACGCTGCAGCTG...TTCTCTGCTGCCTGGACTTTTTGTTAGTGATTTACTATTGGGACTGACCCAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCGAATTTCTCCAAAACTaGAAGTTCATCAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAEFLQN*KFIRFP
Trigger: TGGAAACCTGATGAACTTCAAGTTTTGGAGAAATTC...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGGAGCTCCTAATAGCTaGGTGAAGGCTATTAACGTA +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFGAPNS*VKAINV
Trigger: TACGTTAATAGCCTTCACCAAGCTATTAGGAGCTCC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp CGTGGAAAATTCTATCATCCTAACCTAGGTCTTTGTGGCAATGTGTGCTATAAAGGAGCTCCTAATAGCTaGGTGAAGGCTATTAACGTA +
Preference number: 5 (lower is better)
Translates to: RGKFYHPNLGLCGNVCYKGAPNS*VKAINV
Trigger: TACGTTAATAGCCTTCACCAAGCTATTAGGAGCTCC...TTTATAGCACACATTGCCACAAAGACCTAGGTTAGGATGATAGAATTTTCCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAATACTAACAGGTTCTaGGGGAGGGACCGATGTTTT +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFNTNRF*GRDRCF
Trigger: AAAACATCGGTCCCTCCCCAAGAACCTGTTAGTATT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AAACCCTGCAGAGATGTATTAATACCAAAAACTCCATTTGACCCTGGACAGGCCTTCCCTCTATGTCCCTaGAATGTAAGTTCTCTTAAA +
Preference number: 5 (lower is better)
Translates to: KPCRDVLIPKTPFDPGQAFPLCP*NVSSLK
Trigger: TTTAAGAGAACTTACATTCAAGGGACATAGAGGGAA...GGCCTGTCCAGGGTCAAATGGAGTTTTTGGTATTAATACATCTCTGCAGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGGAAGTGGAGGCAACTaGCAGAAAATTGTGAGCATA +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFGSGGN*QKIVSI
Trigger: TATGCTCACAATTTTCTGCAAGTTGCCTCCACTTCC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 90 bp AAGCGTTTGGTTGGTTTTGGGACTAAGAGCTACTCTGCATTTCAGTaGATCAGTCTTAAACATGATCACTCCGGGTTCATTAGAATTTAT +
Preference number: 5 (lower is better)
Translates to: KRLVGFGTKSYSAFQ*ISLKHDHSGFIRIY
Trigger: ATAAATTCTAATGAACCCGGAGTGATCATGTTTAAGACTGATGCACTGAAATGCAGAGTAGCTCTTAGTCCCAAAACCAACCAAACGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000433003.1
ENST00000472736.1
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGCTTCTGATGAGCTCTaGCATGGACACTGTCAATCA +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCASDEL*HGHCQS
Trigger: TGATTGACAGTGTCCATGCAAGAGCTCATCAGAAGC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTCTGTTTCCCGGTTTTaGTACGAAAAACCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFSVSRF*YEKPSP
Trigger: AGGACTTGGTTTTTCGTACAAAAACCGGGAAACAGA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTGCATTGTTTGAGAACTaGTTCCAGCTCGAGGGGAAT +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCALFEN*FQLEGN
Trigger: ATTCCCCTCGAGCTGGAACAAGTTCTCAAACAATGC...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TGGGTCAGTCCCAATAGTAAATCACTAACAAAAAGTCCAGGCAGCAGAGAAATGCTGCAGCGTTTCTTGTaGAATAATTCTTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: WVSPNSKSLTKSPGSREMLQRFL*NNSLKM
Trigger: CATCTTCAAAGAATTATTCAACAAGAAACGCTGCAG...CATTTCTCTGCTGCCTGGACTTTTTGTTAGTGATTTACTATTGGGACTGACCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGTGGTCCTGCAACTCTaGTTTCAAAGAATTTCTCCA +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFVVLQL*FQRISP
Trigger: TGGAGAAATTCTTTGAAACAAGAGTTGCAGGACCAC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTAACCTCTTCAGAATGTaGCTGACCATCATGGGAGCA +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCNLFRM*LTIMGA
Trigger: TGCTCCCATGATGGTCAGCAACATTCTGAAGAGGTT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTCTGGAGGAATAATTTaGTCCCTAATGCAGGTTGGC +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCSGGII*SLMQVG
Trigger: GCCAACCTGCATTAGGGACAAAATTATTCCTCCAGA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTGCTCTTTCTACTAATTaGGAATCAGAAGCTGGCAAA +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFALSTN*ESEAGK
Trigger: TTTGCCAGCTTCTGATTCCAAATTAGTAGAAAGAGC...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAAGCCAAAACTTAAGTaGCTGAATCCAGGGTATGAT +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFKPKLK*LNPGYD
Trigger: ATCATACCCTGGATTCAGCAACTTAAGTTTTGGCTT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTTGTTTTATAGACTGCTaGCAACGCTGTTGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCCFIDC*QRCCPS
Trigger: GCTTGGACAACAGCGTTGCAAGCAGTCTATAAAACA...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp AACCTAGGTCTTTGTGGCAATGTGTGCTATAAATACAAGCTTCTGGCATTAGCAGAATTTCTCCAAAACTaGAAGTTCATCAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: NLGLCGNVCYKYKLLALAEFLQN*KFIRFP
Trigger: TGGAAACCTGATGAACTTCAAGTTTTGGAGAAATTC...TGCTAATGCCAGAAGCTTGTATTTATAGCACACATTGCCACAAAGACCTAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433003.1
CDS TCA 90 bp AAGTCTCCTCACGTAATGATGTCTCCAGCTATCTCCTCTTCTTTCTaGTCAGGTGTCCATAAACAAATACTAAGTTTCTGCAGAAATATA +
Preference number: 5 (lower is better)
Translates to: KSPHVMMSPAISSSF*SGVHKQILSFCRNI
Trigger: TATATTTCTGCAGAAACTTAGTATTTGTTTATGGACACCTGATCAGAAAGAAGAGGAGATAGCTGGAGACATCATTACGTGAGGAGACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495865.1
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTTTTGTTGAACATTTCTaGAAGCTGATGGAGAATGGT +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFFVEHF*KLMENG
Trigger: ACCATTCTCCATCAGCTTCAAGAAATGTTCAACAAA...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCTGCAGCGTTTCTTGTaGAATAATTCTTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFLQRFL*NNSLKM
Trigger: CATCTTCAAAGAATTATTCAACAAGAAACGCTGCAG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTCATTATTTGGGATCCTaGATCAATACGAACCACATA +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFHYLGS*INTNHI
Trigger: TATGTGGTTCGTATTGATCAAGGATCCCAAATAATG...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS-3UTR CAA 90 bp TTTCCTAAATACCATGAAGTCGGTAGAAGACCTTTGCATCAGACCATGTTCTTTAATCCTATCTTACTCTaGATTGGCACAATGCATTCA +
Preference number: 5 (lower is better)
Translates to: FPKYHEVGRRPLHQTMFFNPILL*IGTMHS
Trigger: TGAATGCATTGTGCCAATCAAGAGTAAGATAGGATT...AAAGAACATGGTCTGATGCAAAGGTCTTCTACCGACTTCATGGTATTTAGGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 90 bp TATTCAGGAACGTCTGTAATAACTGAACCACATTTGGTGTTTTGTTaGACATTTCTTGAAGCTGATGGAGAATGGTATTGTGACAGTTAC +
Preference number: 5 (lower is better)
Translates to: YSGTSVITEPHLVFC*TFLEADGEWYCDSY
Trigger: GTAACTGTCACAATACCATTCTCCATCAGCTTCAAGAAATGTTCAACAAAACACCAAATGTGGTTCAGTTATTACAGACGTTCCTGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496531.2
CDS-3UTR CAA 90 bp TTAAATATTGCTTCCTTGGGGTGTGTTTATAACAACTCCCAGAACATTTCATGTATGGAAGAGTTTTCATaGGCATTGAAGCCTCTAAGA +
Preference number: 5 (lower is better)
Translates to: LNIASLGCVYNNSQNISCMEEFS*ALKPLR
Trigger: TCTTAGAGGCTTCAATGCCAATGAAAACTCTTCCAT...ACATGAAATGTTCTGGGAGTTGTTATAAACACACCCCAAGGAAGCAATATTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 90 bp TTTAATGAACAGTTTATTCTTAGAAAGGTTTCCAATAGGATGAGTTaGGTAATTGGAAAGCTGCAATGTTTCACTGCTTATCGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: FNEQFILRKVSNRMS*VIGKLQCFTAYRRQ
Trigger: CTGCCTACGATAAGCAGTGAAACATTGCAGCTTTCCAATTACTCAACTCATCCTATTGGAAACCTTTCTAAGAATAAACTGTTCATTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp GCGGCGCAGGACCGGGCTTGGCGCAACGGCACACGATaGGGTCCTCGAGCCTCCCGGGCGCTCGGTCACCGC +
Preference number: 6 (lower is better)
Translates to: AAQDRAWRNGTR*GPRASRALGHR
Trigger: GCGGTGACCGAGCGCCCGGGAGGCTCGAGGACCGCATCGTGTGCCGTTGCGCCAAGCCCGGTCCTGCGCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp TCCGGGCGGGACCAGCTGGTGGTTCTCCAGCTGCACTaGGGCCATGGCGGCGCAGGACCGGGCTTGGCGCAA +
Preference number: 6 (lower is better)
Translates to: SGRDQLVVLQLH*GHGGAGPGLAQ
Trigger: TTGCGCCAAGCCCGGTCCTGCGCCGCCATGGCCCCAGTGCAGCTGGAGAACCACCAGCTGGTCCCGCCCGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp GGACCAGCTGGTGGTTCTCCAGCTGCACTGGGGCCATaGCGGCGCAGGACCGGGCTTGGCGCAACGGCACAC +
Preference number: 6 (lower is better)
Translates to: GPAGGSPAALGP*RRRTGLGATAH
Trigger: GTGTGCCGTTGCGCCAAGCCCGGTCCTGCGCCGCCATGGCCCCAGTGCAGCTGGAGAACCACCAGCTGGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp TTTGGATTTCAGCACCACAGCAGGCGTCCCAGGAGGTaGAATCGGCGGCGCGCTGGGAGGGATCGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: FGFQHHSRRPRR*NRRRAGRDRQA
Trigger: TGCCTGACGATCCCTCCCAGCGCGCCGCCGATTGCACCTCCTGGGACGCCTGCTGTGGTGCTGAAATCCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
CDS CCA 72 bp CAGCAGGCGTCCCAGGAGGTGCAATCGGCGGCGCGCTaGGAGGGATCGTCAGGCAAAACTGAACATTCCATT +
Preference number: 6 (lower is better)
Translates to: QQASQEVQSAAR*EGSSGKTEHSI
Trigger: AATGGAATGTTCAGTTTTGCCTGACGATCCCTCCCAGCGCGCCGCCGATTGCACCTCCTGGGACGCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
CDS TCA 72 bp GTGAGGATGGTAGGTATGGATGCCGCCCAAGAGCGCTaGGGTAGTTTACGAGGTGGAGGCATGTTTGTTGGC +
Preference number: 6 (lower is better)
Translates to: VRMVGMDAAQER*GSLRGGGMFVG
Trigger: GCCAACAAACATGCCTCCACCTCGTAAACTACCTCAGCGCTCTTGGGCGGCATCCATACCTACCATCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324817.6
ENST00000433003.1
CDS TCA 72 bp ATCGGCGGCGCGCTGGGAGGGATCGTCAGGCAAAACTaGACATTCCATTTTAGCTGTGTTGCTTGGTCAGGG +
Preference number: 6 (lower is better)
Translates to: IGGALGGIVRQN*TFHFSCVAWSG
Trigger: CCCTGACCAAGCAACACAGCTAAAATGGAATGTTCAGTTTTGCCTGACGATCCCTCCCAGCGCGCCGCCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
CDS CCA 72 bp ACTGTGGCAGAATGGAGAAGCACTGGTAGGCAGTATTaGTTCTCTGGGTCAAGCCCAACATCGGCACAGTGG +
Preference number: 6 (lower is better)
Translates to: TVAEWRSTGRQY*FSGSSPTSAQW
Trigger: CCACTGTGCCGATGTTGGGCTTGACCCAGAGAACCAATACTGCCTACCAGTGCTTCTCCATTCTGCCACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp GTTCCTGAAGGCCAGTCTGATGTGGGTGGACGACTGTaGCAGAATGGAGAAGCACTGGTAGGCAGTATTGGT +
Preference number: 6 (lower is better)
Translates to: VPEGQSDVGGRL*QNGEALVGSIG
Trigger: ACCAATACTGCCTACCAGTGCTTCTCCATTCTGCCACAGTCGTCCACCCACATCAGACTGGCCTTCAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp GTCCTATTGAGATTCCATGCGAGGATGGGGGAGGAGTaGGAACAAATGACGCTGGTGATGGGGCTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: VLLRFHARMGEE*EQMTLVMGLSK
Trigger: CTTTGAGAGCCCCATCACCAGCGTCATTTGTTCCAACTCCTCCCCCATCCTCGCATGGAATCTCAATAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 72 bp GCATGGCTGAAGCCATCACCTTCCACTTGCACTCCTTaGTGTGGAATCTCCAGATTGGACAACTCCAACCGA +
Preference number: 6 (lower is better)
Translates to: AWLKPSPSTCTP*CGISRLDNSNR
Trigger: TCGGTTGGAGTTGTCCAATCTGGAGATTCCACATCAAGGAGTGCAAGTGGAAGGTGATGGCTTCAGCCATGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp TGTGCAGACACTCTGAATTACCACAGGGCTCCAAGATaGGAACAACAAGAGCTGGGAGTGCAGTCTCTATGG +
Preference number: 6 (lower is better)
Translates to: CADTLNYHRAPR*EQQELGVQSLW
Trigger: CCATAGAGACTGCACTCCCAGCTCTTGTTGTTCCCATCTTGGAGCCCTGTGGTAATTCAGAGTGTCTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp GCTGAAGCCATCACCTTCCACTTGCACTCCTTGATGTaGAATCTCCAGATTGGACAACTCCAACCGAAGTCC +
Preference number: 6 (lower is better)
Translates to: AEAITFHLHSLM*NLQIGQLQPKS
Trigger: GGACTTCGGTTGGAGTTGTCCAATCTGGAGATTCCACATCAAGGAGTGCAAGTGGAAGGTGATGGCTTCAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp TCAATGCAATACATGTTCCTGAAGGCCAGTCTGATGTaGGTGGACGACTGTGGCAGAATGGAGAAGCACTGG +
Preference number: 6 (lower is better)
Translates to: SMQYMFLKASLM*VDDCGRMEKHW
Trigger: CCAGTGCTTCTCCATTCTGCCACAGTCGTCCACCCACATCAGACTGGCCTTCAGGAACATGTATTGCATTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp ACGAGGCCAGGCGATCAGCAGTGTCCACAAACAGGATaGCTTGCTGATCTAAAAAGCTTGAAATCATCGCAC +
Preference number: 6 (lower is better)
Translates to: TRPGDQQCPQTG*LADLKSLKSSH
Trigger: GTGCGATGATTTCAAGCTTTTTAGATCAGCAAGCCATCCTGTTTGTGGACACTGCTGATCGCCTGGCCTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324817.6
ENST00000482034.5
CDS CCA 72 bp GGCTGCTTTGGAAATGGCTGTTGCTGGGGTGGTGGCTaGAGCTGCGATATTAAAGAATCCATCATATCTCCT +
Preference number: 6 (lower is better)
Translates to: GCFGNGCCWGGG*SCDIKESIISP
Trigger: AGGAGATATGATGGATTCTTTAATATCGCAGCTCCAGCCACCACCCCAGCAACAGCCATTTCCAAAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp GAGCCTAGACTGCACCAGTTGATGGATGAAGCTGATTaGCATGCTATGAACCAAAGCTCGCCCATCTCCTGT +
Preference number: 6 (lower is better)
Translates to: EPRLHQLMDEAD*HAMNQSSPISC
Trigger: ACAGGAGATGGGCGAGCTTTGGTTCATAGCATGCAAATCAGCTTCATCCATCAACTGGTGCAGTCTAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp ATTACCACAGGGCTCCAAGATGGGAACAACAAGAGCTaGGAGTGCAGTCTCTATGGAAGAGTTTTCATTGGC +
Preference number: 6 (lower is better)
Translates to: ITTGLQDGNNKS*ECSLYGRVFIG
Trigger: GCCAATGAAAACTCTTCCATAGAGACTGCACTCCCAGCTCTTGTTGTTCCCATCTTGGAGCCCTGTGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 90 bp ATCCTGAAGAGGTTTCTCATCAGCAAAGAGCCTAGACTGCACCAGTaGATGGATGAAGCTGATTTGCATGCTATGAACCAAAGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: ILKRFLISKEPRLHQ*MDEADLHAMNQSSP
Trigger: GGGCGAGCTTTGGTTCATAGCATGCAAATCAGCTTCATCCATCAACTGGTGCAGTCTAGGCTCTTTGCTGATGAGAAACCTCTTCAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 90 bp ATCAGCAAAGAGCCTAGACTGCACCAGTTGATGGATGAAGCTGATTaGCATGCTATGAACCAAAGCTCGCCCATCTCCTGTTTCCTTATC +
Preference number: 6 (lower is better)
Translates to: ISKEPRLHQLMDEAD*HAMNQSSPISCFLI
Trigger: GATAAGGAAACAGGAGATGGGCGAGCTTTGGTTCATAGCATGCAAATCAGCTTCATCCATCAACTGGTGCAGTCTAGGCTCTTTGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp ACAGGGCTCCAAGATGGGAACAACAAGAGCTGGGAGTaGAGTCTCTATGGAAGAGTTTTCATTGGCATTGAA +
Preference number: 6 (lower is better)
Translates to: TGLQDGNNKSWE*SLYGRVFIGIE
Trigger: TTCAATGCCAATGAAAACTCTTCCATAGAGACTGCACTCCCAGCTCTTGTTGTTCCCATCTTGGAGCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp CAGCAGCAATGCCATTGCAGGGCTGTCTTCACGATCTaGAGCATTCACAGACATAAAGTAGTACTTGTACGA +
Preference number: 6 (lower is better)
Translates to: QQQCHCRAVFTI*SIHRHKVVLVR
Trigger: TCGTACAAGTACTACTTTATGTCTGTGAATGCTGCAGATCGTGAAGACAGCCCTGCAATGGCATTGCTGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp TCCAAAACAAAGGCACCTACAGCATTGAGCATCAGCTaGTGGCAACACTGCAAAAAGAGATGCGATCAGACA +
Preference number: 6 (lower is better)
Translates to: SKTKAPTALSIS*WQHCKKRCDQT
Trigger: TGTCTGATCGCATCTCTTTTTGCAGTGTTGCCAGCAGCTGATGCTCAATGCTGTAGGTGCCTTTGTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472736.1
CDS CCA 72 bp CTCCAGATTGGACAACTCCAACCGAAGTCCTACAAATaGCATATTTGTATCACACATAGCGACGAAGTGGGC +
Preference number: 6 (lower is better)
Translates to: LQIGQLQPKSYK*HICITHSDEVG
Trigger: GCCCACTTCGTCGCTATGTGTGATACAAATATGCCATTTGTAGGACTTCGGTTGGAGTTGTCCAATCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp ATTGGCATTGAAGCCTCTAAGAATGGCCTTCAGTTCTaGGAGCTTCTGATGAGCTCTTGCATGGACACTGTC +
Preference number: 6 (lower is better)
Translates to: IGIEASKNGLQF*ELLMSSCMDTV
Trigger: GACAGTGTCCATGCAAGAGCTCATCAGAAGCTCCAAGAACTGAAGGCCATTCTTAGAGGCTTCAATGCCAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp GGGAGTGCAGTCTCTATGGAAGAGTTTTCATTGGCATaGAAGCCTCTAAGAATGGCCTTCAGTTCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: GSAVSMEEFSLA*KPLRMAFSSWS
Trigger: GCTCCAAGAACTGAAGGCCATTCTTAGAGGCTTCAATGCCAATGAAAACTCTTCCATAGAGACTGCACTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp GAAAGTGCAATCAAGAAGAGAGCGGTCCAGAGCCTTTaGGGTTTCCTCAGTTATACCCTTACAGGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: ESAIKKRAVQSL*GFLSYTLTGRN
Trigger: ATTCCTCCCTGTAAGGGTATAACTGAGGAAACCCAAAAGGCTCTGGACCGCTCTCTTCTTGATTGCACTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 90 bp AGAGTTTTCATTGGCATTGAAGCCTCTAAGAATGGCCTTCAGTTCTaGGAGCTTCTGATGAGCTCTTGCATGGACACTGTCAATCAGGAG +
Preference number: 6 (lower is better)
Translates to: RVFIGIEASKNGLQF*ELLMSSCMDTVNQE
Trigger: CTCCTGATTGACAGTGTCCATGCAAGAGCTCATCAGAAGCTCCAAGAACTGAAGGCCATTCTTAGAGGCTTCAATGCCAATGAAAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 72 bp TTCACCCGGCCATTTGCAACTGTAAGATTTGCTAACTaGGGAGGAAGATCTGTGGTTACAAGCCGATGTCTA +
Preference number: 6 (lower is better)
Translates to: FTRPFATVRFAN*GGRSVVTSRCL
Trigger: TAGACATCGGCTTGTAACCACAGATCTTCCTCCTCAGTTAGCAAATCTTACAGTTGCAAATGGCCGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp CTGGACATGGATCATCAGACAACTTGCGCTTGGCATTaGTTCTGGTCTGTTTCCCGGTTTTTGTACGAAAAA +
Preference number: 6 (lower is better)
Translates to: LDMDHQTTCAWH*FWSVSRFLYEK
Trigger: TTTTTCGTACAAAAACCGGGAAACAGACCAGAACCAATGCCAAGCGCAAGTTGTCTGATGATCCATGTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp AAAGTGCAATCAAGAAGAGAGCGGTCCAGAGCCTTTTaGGTTTCCTCAGTTATACCCTTACAGGGAGGAATT +
Preference number: 6 (lower is better)
Translates to: KVQSRRERSRAF*VSSVIPLQGGI
Trigger: AATTCCTCCCTGTAAGGGTATAACTGAGGAAACCCAAAAGGCTCTGGACCGCTCTCTTCTTGATTGCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp ACGAGGCCAGGCGATCAGCAGTGTCCACAAACAGGATaGCTTGCTGATCTAAAAAGCTTGAAATCATCTTTA +
Preference number: 6 (lower is better)
Translates to: TRPGDQQCPQTG*LADLKSLKSSL
Trigger: TAAAGATGATTTCAAGCTTTTTAGATCAGCAAGCCATCCTGTTTGTGGACACTGCTGATCGCCTGGCCTCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492219.1
CDS CAA 90 bp ATGTGCACACAATCCCTGAGGATGTGTGTAGGAGCTCCTAATAGCTaGGTGAAGGCTATTAACGTATTAGCTTTAAATGGTGGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: MCTQSLRMCVGAPNS*VKAINVLALNGGPA
Trigger: TGCAGGACCACCATTTAAAGCTAATACGTTAATAGCCTTCACCAAGCTATTAGGAGCTCCTACACACATCCTCAGGGATTGTGTGCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
ENST00000472736.1
CDS TCA 72 bp TACAGGGAGGAATTTTTAATAAGCGAATTGCATGGCTaGAGCCATCACCTTCCACTTGCACTCCTTGATGTG +
Preference number: 6 (lower is better)
Translates to: YREEFLISELHG*SHHLPLALLDV
Trigger: CACATCAAGGAGTGCAAGTGGAAGGTGATGGCTTCAGCCATGCAATTCGCTTATTAAAAATTCCTCCCTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 72 bp CTGATGGAGAATGGTATTGTGACAGTTACTGCAACCTaGGTTTGGGCCAACAGTTCCCAAAGAAATGTGGAA +
Preference number: 6 (lower is better)
Translates to: LMENGIVTVTAT*VWANSSQRNVE
Trigger: TTCCACATTTCTTTGGGAACTGTTGGCCCAAACTCAGGTTGCAGTAACTGTCACAATACCATTCTCCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324817.6
ENST00000496531.2
CDS TCA 72 bp AGCATGCAGATTTCCTGGAGACTGTGTGTGCATCATTaGGGGAGACTGATTGACTGTGCTATGATAAGATGT +
Preference number: 6 (lower is better)
Translates to: SMQISWRLCVHH*GRLIDCAMIRC
Trigger: ACATCTTATCATAGCACAGTCAATCAGTCTCCCTCAATGATGCACACACAGTCTCCAGGAAATCTGCATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 72 bp CTGCTGTCTGGGAATGTCTGCCTGCTGGGTTGTACCTaGAGCCATGTCATAAATGATTGGAACTATAATACT +
Preference number: 6 (lower is better)
Translates to: LLSGNVCLLGCT*SHVINDWNYNT
Trigger: AGTATTATAGTTCCAATCATTTATGACATGGCTTCAGGTACAACCCAGCAGGCAGACATTCCCAGACAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000416199.5
ENST00000433003.1
CDS GCA 72 bp CTTGAAGCTGATGGAGAATGGTATTGTGACAGTTACTaGAACCTGAGTTTGGGCCAACAGTTCCCAAAGAAA +
Preference number: 6 (lower is better)
Translates to: LEADGEWYCDSY*NLSLGQQFPKK
Trigger: TTTCTTTGGGAACTGTTGGCCCAAACTCAGGTTGCAGTAACTGTCACAATACCATTCTCCATCAGCTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000324817.6
ENST00000496531.2
CDS GCA 72 bp GCTGTTATCAAAAAGACTATAGGCACCATCCCGTATTaGCACAACACCTCGACTCCGGCAGTATATATCAAT +
Preference number: 6 (lower is better)
Translates to: AVIKKTIGTIPY*HNTSTPAVYIN
Trigger: ATTGATATATACTGCCGGAGTCGAGGTGTTGTGGCAATACGGGATGGTGCCTATAGTCTTTTTGATAACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp TCCTGCTCGTTTTGTTTTCTTGGATTCTACTGGACATaGATCATCAGACAACTTGCGCTTGGCATTGGTTCT +
Preference number: 6 (lower is better)
Translates to: SCSFCFLGFYWT*IIRQLALGIGS
Trigger: AGAACCAATGCCAAGCGCAAGTTGTCTGATGATCCATGTCCAGTAGAATCCAAGAAAACAAAACGAGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp AAAACAAAGGCACCTACAGCATTGAGCATCAGCTGCTaGCAACACTGCAAAAAGAGATGCGATCAGACATTA +
Preference number: 6 (lower is better)
Translates to: KTKAPTALSISC*QHCKKRCDQTL
Trigger: TAATGTCTGATCGCATCTCTTTTTGCAGTGTTGCCAGCAGCTGATGCTCAATGCTGTAGGTGCCTTTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472736.1
CDS CAA 72 bp AGGTTTCTCATCAGCAAAGAGCCTAGACTGCACCAGTaGATGGATGAAGCTGATTTGCATGCTATGAACCAA +
Preference number: 6 (lower is better)
Translates to: RFLISKEPRLHQ*MDEADLHAMNQ
Trigger: TTGGTTCATAGCATGCAAATCAGCTTCATCCATCAACTGGTGCAGTCTAGGCTCTTTGCTGATGAGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp GAATGGCCTTCAGTTCTTGGAGCTTCTGATGAGCTCTaGCATGGACACTGTCAATCAGGAGTTTTTCTATTG +
Preference number: 6 (lower is better)
Translates to: EWPSVLGASDEL*HGHCQSGVFLL
Trigger: CAATAGAAAAACTCCTGATTGACAGTGTCCATGCAAGAGCTCATCAGAAGCTCCAAGAACTGAAGGCCATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp TGCTGTTATCAAAAAGACTATAGGCACCATCCCGTATaGCCACAACACCTCGACTCCGGCAGTATATATCAA +
Preference number: 6 (lower is better)
Translates to: CCYQKDYRHHPV*PQHLDSGSIYQ
Trigger: TTGATATATACTGCCGGAGTCGAGGTGTTGTGGCAATACGGGATGGTGCCTATAGTCTTTTTGATAACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp CGTCCTCATTTACAGACCTTCTTCGAGCATCCTGATTaGTGTCAACAAACATATTCAGGAACGTCTTTAGTC +
Preference number: 6 (lower is better)
Translates to: RPHLQTFFEHPD*CQQTYSGTSLV
Trigger: GACTAAAGACGTTCCTGAATATGTTTGTTGACAGCAATCAGGATGCTCGAAGAAGGTCTGTAAATGAGGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp GTTGGTTTTGGGACTAAGAGCTACTCTGCATTTCAGTaGATCAGTCTTAAACATGATCACTCCGGGTTCATT +
Preference number: 6 (lower is better)
Translates to: VGFGTKSYSAFQ*ISLKHDHSGFI
Trigger: AATGAACCCGGAGTGATCATGTTTAAGACTGATGCACTGAAATGCAGAGTAGCTCTTAGTCCCAAAACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000433003.1
ENST00000472736.1
CDS CCA 72 bp GCCCATTTCACTAAAGCTAATAATCGAACGAAGAGTTaGCGTGTCCGGCTAGCAAACTGCACTATTTCTATT +
Preference number: 6 (lower is better)
Translates to: AHFTKANNRTKS*RVRLANCTISI
Trigger: AATAGAAATAGTGCAGTTTGCTAGCCGGACACGCCAACTCTTCGTTCGATTATTAGCTTTAGTGAAATGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324817.6
ENST00000463072.1
ENST00000482034.5
ENST00000495865.1
CDS CCA 72 bp CATTTCTCCTGCTCGTTTTGTTTTCTTGGATTCTACTaGACATGGATCATCAGACAACTTGCGCTTGGCATT +
Preference number: 6 (lower is better)
Translates to: HFSCSFCFLGFY*TWIIRQLALGI
Trigger: AATGCCAAGCGCAAGTTGTCTGATGATCCATGTCCAGTAGAATCCAAGAAAACAAAACGAGCAGGAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp TCACTGCTTATCGTAGGCAGATGTTTTATAGACTGCTaGCAACGCTGTTGTCCAAGCCAAAACTTAAGTTGC +
Preference number: 6 (lower is better)
Translates to: SLLIVGRCFIDC*QRCCPSQNLSC
Trigger: GCAACTTAAGTTTTGGCTTGGACAACAGCGTTGCAAGCAGTCTATAAAACATCTGCCTACGATAAGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp AGCATTCACAGACATAAAGTAGTACTTGTACGACAGTaGTGTGGGTTTATTGGGAACCTCCAACATCTCCAC +
Preference number: 6 (lower is better)
Translates to: SIHRHKVVLVRQ*CGFIGNLQHLH
Trigger: GTGGAGATGTTGGAGGTTCCCAATAAACCCACACAACTGTCGTACAAGTACTACTTTATGTCTGTGAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 90 bp ACGATCTGCAGCATTCACAGACATAAAGTAGTACTTGTACGACAGTaGTGTGGGTTTATTGGGAACCTCCAACATCTCCACAACAATGTA +
Preference number: 6 (lower is better)
Translates to: TICSIHRHKVVLVRQ*CGFIGNLQHLHNNV
Trigger: TACATTGTTGTGGAGATGTTGGAGGTTCCCAATAAACCCACACAACTGTCGTACAAGTACTACTTTATGTCTGTGAATGCTGCAGATCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 90 bp CAACTAGTTTGCTGTTATCAAAAAGACTATAGGCACCATCCCGTATaGCCACAACACCTCGACTCCGGCAGTATATATCAATGCAATACA +
Preference number: 6 (lower is better)
Translates to: QLVCCYQKDYRHHPV*PQHLDSGSIYQCNT
Trigger: TGTATTGCATTGATATATACTGCCGGAGTCGAGGTGTTGTGGCAATACGGGATGGTGCCTATAGTCTTTTTGATAACAGCAAACTAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 72 bp TTATCGTCCTCATTTACAGACCTTCTTCGAGCATCCTaGTTGCTGTCAACAAACATATTCAGGAACGTCTGT +
Preference number: 6 (lower is better)
Translates to: LSSSFTDLLRAS*LLSTNIFRNVC
Trigger: ACAGACGTTCCTGAATATGTTTGTTGACAGCAATCAGGATGCTCGAAGAAGGTCTGTAAATGAGGACGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496531.2
CDS GCA 72 bp GTTTCACTGCTTATCGTAGGCAGATGTTTTATAGACTaGTTGCAACGCTGTTGTCCAAGCCAAAACTTAAGT +
Preference number: 6 (lower is better)
Translates to: VSLLIVGRCFID*LQRCCPSQNLS
Trigger: ACTTAAGTTTTGGCTTGGACAACAGCGTTGCAAGCAGTCTATAAAACATCTGCCTACGATAAGCAGTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp GTGGACAATTTGCAAACACTAACTCTGCTACCCAAGTaGGGTTATTTCTACCTTGTAATCGGAAAGTGCAAT +
Preference number: 6 (lower is better)
Translates to: VDNLQTLTLLPK*GYFYLVIGKCN
Trigger: ATTGCACTTTCCGATTACAAGGTAGAAATAACCGCACTTGGGTAGCAGAGTTAGTGTTTGCAAATTGTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp CGTCCTCATTTACAGACCTTCTTCGAGCATCCTGATTaGTGTCAACAAACATATTCAGGAACGTCTGTAATA +
Preference number: 6 (lower is better)
Translates to: RPHLQTFFEHPD*CQQTYSGTSVI
Trigger: TATTACAGACGTTCCTGAATATGTTTGTTGACAGCAATCAGGATGCTCGAAGAAGGTCTGTAAATGAGGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496531.2
CDS CAA 72 bp TTGAAGGCACACATTTCTCCTGCTCGTTTTGTTTTCTaGGATTCTACTGGACATGGATCATCAGACAACTTG +
Preference number: 6 (lower is better)
Translates to: LKAHISPARFVF*DSTGHGSSDNL
Trigger: CAAGTTGTCTGATGATCCATGTCCAGTAGAATCCAAGAAAACAAAACGAGCAGGAGAAATGTGTGCCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 90 bp AAATGGTGGTCCTGCAACTCTTGTTTCAAAGAATTTCTCCAAAACTaGAAGTTCATCAGGTTTCCACTGTCCTGCATTTTCAGGTGTCAC +
Preference number: 6 (lower is better)
Translates to: KWWSCNSCFKEFLQN*KFIRFPLSCIFRCH
Trigger: GTGACACCTGAAAATGCAGGACAGTGGAAACCTGATGAACTTCAAGTTTTGGAGAAATTCTTTGAAACAAGAGTTGCAGGACCACCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324817.6
ENST00000433003.1
ENST00000472736.1
CDS TCA 72 bp ACTAATTTGGAATCAGAAGCTGGCAAAGGAGGATCGTaGAAAATCTGTAAAGGCTTGGAGACATCATTCTCA +
Preference number: 6 (lower is better)
Translates to: TNLESEAGKGGS*KICKGLETSFS
Trigger: TGAGAATGATGTCTCCAAGCCTTTACAGATTTTTCACGATCCTCCTTTGCCAGCTTCTGATTCCAAATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS TCA 72 bp TTATCGTCCTCATTTACAGACCTTCTTCGAGCATCCTaGTTGCTGTCAACAAACATATTCAGGAACGTCTTT +
Preference number: 6 (lower is better)
Translates to: LSSSFTDLLRAS*LLSTNIFRNVF
Trigger: AAAGACGTTCCTGAATATGTTTGTTGACAGCAATCAGGATGCTCGAAGAAGGTCTGTAAATGAGGACGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp ATAAGTGGTCGATCTTCATGGCTCTTTCTACTAATTTaGAATCAGAAGCTGGCAAAGGAGGATCGTGAAAAA +
Preference number: 6 (lower is better)
Translates to: ISGRSSWLFLLI*NQKLAKEDREK
Trigger: TTTTTCACGATCCTCCTTTGCCAGCTTCTGATTCCAAATTAGTAGAAAGAGCCATGAAGATCGACCACTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CCA 72 bp GGGAACCTCCAACATCTCCACAACAATGTAGTATTGTaGAAGGCGGGTAAGTTTAATGAACAGTTTATTCTT +
Preference number: 6 (lower is better)
Translates to: GNLQHLHNNVVL*KAGKFNEQFIL
Trigger: AAGAATAAACTGTTCATTAAACTTACCCGCCTTCCACAATACTACATTGTTGTGGAGATGTTGGAGGTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS CAA 72 bp CTCTTGCATGGACACTGTCAATCAGGAGTTTTTCTATaGATAAGTGGTCGATCTTCATGGCTCTTTCTACTA +
Preference number: 6 (lower is better)
Translates to: LLHGHCQSGVFL*ISGRSSWLFLL
Trigger: TAGTAGAAAGAGCCATGAAGATCGACCACTTATCAATAGAAAAACTCCTGATTGACAGTGTCCATGCAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324817.6
CDS GCA 72 bp AACATGATCACTCCGGGTTCATTAGAATTTATCAGCTaGAGCTACAAAACAAGGACACATCAAATTAACATG +
Preference number: 6 (lower is better)
Translates to: NMITPGSLEFIS*SYKTRTHQINM
Trigger: CATGTTAATTTGATGTGTCCTTGTTTTGTAGCTGCAGCTGATAAATTCTAATGAACCCGGAGTGATCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472736.1
CDS TCA 72 bp CAGTTTATTCTTAGAAAGGTTTCCAATAGGATGAGTTaGGTAATTGGAAAGCTGCAATGTTTCACTGCTTAT +
Preference number: 6 (lower is better)
Translates to: QFILRKVSNRMS*VIGKLQCFTAY
Trigger: ATAAGCAGTGAAACATTGCAGCTTTCCAATTACTCAACTCATCCTATTGGAAACCTTTCTAAGAATAAACTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324817.6