RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED12L (Homo sapiens)

Ensembl gene IDs: ENSG00000144893

Ensembl transcript IDs: ENST00000273432.8, ENST00000309237.8, ENST00000422248.6, ENST00000468305.1, ENST00000469768.1, ENST00000474524.5, ENST00000480026.1, ENST00000488092.1, ENST00000491549.5

Found 819 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTGTCACCAGGACAGGGGCAGCCTTTCAGCTCCACTGTGTGGCCTTaGGAGTTCCCAAGCCAGAAATCACATGGGAGATGCCTGACCACT +
Preference number: 1 (lower is better)
Translates to: LSPGQGQPFSSTVWP*EFPSQKSHGRCLTT
Trigger: AGTGGTCAGGCATCTCCCATGTGATTTCTGGCTTGGGAACTCCCAAGGCCACACAGTGGAGCTGAAAGGCTGCCCCTGTCCTGGTGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR CCA 90 bp GGAGTATTGTCACCAGGACAGGGGCAGCCTTTCAGCTCCACTGTGTaGCCTTGGGAGTTCCCAAGCCAGAAATCACATGGGAGATGCCTG +
Preference number: 1 (lower is better)
Translates to: GVLSPGQGQPFSSTV*PWEFPSQKSHGRCL
Trigger: CAGGCATCTCCCATGTGATTTCTGGCTTGGGAACTCCCAAGGCCACACAGTGGAGCTGAAAGGCTGCCCCTGTCCTGGTGACAATACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR CCA 90 bp CCTGGTTGCAACTTATGTCTGATGTTAGTACCCTGTGGCTGGAAGTaGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAAGAAG +
Preference number: 1 (lower is better)
Translates to: PGCNLCLMLVPCGWK*SKLRIDLLYFQAKK
Trigger: CTTCTTGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGGGTACTAACATCAGACATAAGTTGCAACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR TCA 90 bp CAGTTCACATGGATGTTGCCACAGCAAAGTAAGCTGACATGTATTTaGGGTCATTTGCATGAGTCAAACTTTGCAATGAGTAACTCACCC +
Preference number: 1 (lower is better)
Translates to: QFTWMLPQQSKLTCI*GHLHESNFAMSNSP
Trigger: GGGTGAGTTACTCATTGCAAAGTTTGACTCATGCAAATGACCTCAAATACATGTCAGCTTACTTTGCTGTGGCAACATCCATGTGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR GCA 90 bp ATTTCAAAAGGTCTGCTAGCACACTCTTCCGGGAGTAGGCCTGCCTaGATGATTCACATTTGTAAACCTACTTTAAAGGTGAATTCAACA +
Preference number: 1 (lower is better)
Translates to: ISKGLLAHSSGSRPA*MIHICKPTLKVNST
Trigger: TGTTGAATTCACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGAAGAGTGTGCTAGCAGACCTTTTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR GCA 90 bp ATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATaGAGAATAAACAGGCCATGTTTCTGTCAAGATCTGACATGCCTT +
Preference number: 1 (lower is better)
Translates to: IRAMQINVRFTITGE*RINRPCFCQDLTCL
Trigger: AAGGCATGTCAGATCTTGACAGAAACATGGCCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR CAA 90 bp ATTGTCACCAGGACAGGGGCAGCCTTTCAGCTCCACTGTGTGGCCTaGGGAGTTCCCAAGCCAGAAATCACATGGGAGATGCCTGACCAC +
Preference number: 2 (lower is better)
Translates to: IVTRTGAAFQLHCVA*GVPKPEITWEMPDH
Trigger: GTGGTCAGGCATCTCCCATGTGATTTCTGGCTTGGGAACTCCCAAGGCCACACAGTGGAGCTGAAAGGCTGCCCCTGTCCTGGTGACAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCACATGGGAGATGCCTaGCCACTCCCTTCTCTCAAC +
Preference number: 2 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFHMGDA*PLPSLN
Trigger: GTTGAGAGAAGGGAGTGGTCAGGCATCTCCCATGTG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR CCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAGTCTTTAAGGGGAGCTaGGGTCTCGCTCCATCTTAT +
Preference number: 2 (lower is better)
Translates to: PVAGSGQSYALISSTSRPVFKGS*GLAPSY
Trigger: ATAAGATGGAGCGAGACCCCAGCTCCCCTTAAAGAC...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR CCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCAAAACCAGAGCCTTCTaGACTTTGGGGCCAGATTCT +
Preference number: 2 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFKTRAF*TLGPDS
Trigger: AGAATCTGGCCCCAAAGTCCAGAAGGCTCTGGTTTT...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCTTTCACCATCACAGGTaGATGCAGAATAAACAGGCC +
Preference number: 2 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFFHHHR*MQNKQA
Trigger: GGCCTGTTTATTCTGCATTCACCTGTGATGGTGAAA...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGGGAGTAGGCCTGCCTaGATGATTCACATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGGSRPA*MIHICK
Trigger: TTTACAAATGTGAATCATGCAGGCAGGCCTACTCCC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGTAGGCCTGCCTGCATaGTTCACATTTGTAAACCTA +
Preference number: 2 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATVGLPA*FTFVNL
Trigger: TAGGTTTACAAATGTGAATCATGCAGGCAGGCCTAC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR CCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTGATGTTAGTACCCTGTaGCTGGAAGTGGTCAAAGCT +
Preference number: 2 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRDVSTL*LEVVKA
Trigger: AGCTTTGACCACTTCCAGCCACAGGGTACTAACATC...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGTTTCTGTCAAGATCTaGCATGCCTTTCAAATCAGT +
Preference number: 2 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGVSVKI*HAFQIS
Trigger: ACTGATTTGAAAGGCATGTCAGATCTTGACAGAAAC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTACCATCACAGGTGAATaGAGAATAAACAGGCCATGT +
Preference number: 2 (lower is better)
Translates to: LETMSSVSTGISSQLLDFTITGE*RINRPC
Trigger: ACATGGCCTGTTTATTCTGCATTCACCTGTGATGGT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR CCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTGGATGGGAAAATGCTTaGGAGGGTCTAGGTCTATTA +
Preference number: 2 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRGWENA*EGLGLL
Trigger: TAATAGACCTAGACCCTCCCAAGCATTTTCCCATCC...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR TCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGTAGGCCTGCCTGCATaGTTCACATTTGTAAACCTA +
Preference number: 2 (lower is better)
Translates to: AMQINVRFTITGECRINRVGLPA*FTFVNL
Trigger: TAGGTTTACAAATGTGAATCATGCAGGCAGGCCTAC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTTTCACCATCACAGGTaGATGCAGAATAAACAGGCC +
Preference number: 2 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIFHHHR*MQNKQA
Trigger: GGCCTGTTTATTCTGCATTCACCTGTGATGGTGAAA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTGTTTCAGCACCTTTTaGCCACAACAAAAGCAAAGA +
Preference number: 2 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATCFSTF*PQQKQR
Trigger: TCTTTGCTTTTGTTGTGGTCAAAAGGTGCTGAAACA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTTCCAAGAACTGTGATTaGTTGATAGGTATAGCTGAC +
Preference number: 2 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRSKNCD*LIGIAD
Trigger: GTCAGCTATACCTATCAATCAATCACAGTTCTTGGA...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTACCATCACAGGTGAATaGAGAATAAACAGGCCATGT +
Preference number: 2 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFTITGE*RINRPC
Trigger: ACATGGCCTGTTTATTCTGCATTCACCTGTGATGGT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGGGAGTAGGCCTGCCTaGATGATTCACATTTGTAAA +
Preference number: 2 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIGSRPA*MIHICK
Trigger: TTTACAAATGTGAATCATGCAGGCAGGCCTACTCCC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTTCAAATCAGTAGTTTaGTCCAGCACAGTTTGGAAA +
Preference number: 2 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIFKSVV*SSTVWK
Trigger: TTTCCAAACTGTGCTGGACCAAACTACTGATTTGAA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR GCA 72 bp CCTTGGGAGTTCCCAAGCCAGAAATCACATGGGAGATaGCTGACCACTCCCTTCTCTCAACGGCAAGTAAAG +
Preference number: 3 (lower is better)
Translates to: PWEFPSQKSHGR*LTTPFSQRQVK
Trigger: CTTTACTTGCCGTTGAGAGAAGGGAGTGGTCAGGCATCTCCCATGTGATTTCTGGCTTGGGAACTCCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR CAA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCAGAGCCTTCTGGACTTaGGGGCCAGATTCTCTGGAA +
Preference number: 3 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFRAFWT*GPDSLE
Trigger: TTCCAGAGAATCTGGCCCCAAAGTCCAGAAGGCTCT...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR CAA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAAACCACAACTTCTCCTaGGCTTTTTGTTTAAACACC +
Preference number: 3 (lower is better)
Translates to: PVAGSGQSYALISSTSRPNHNFS*AFCLNT
Trigger: GGTGTTTAAACAAAAAGCCAAGGAGAAGTTGTGGTT...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR CAA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCTTTCAAATCAGTAGTTaGGTCCAGCACAGTTTGGAA +
Preference number: 3 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFFQISS*VQHSLE
Trigger: TTCCAAACTGTGCTGGACCAAACTACTGATTTGAAA...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR TCA 72 bp CTTTGGGGCCAGATTCTCTGGAAACCATGTCAAGTGTaGGCACTGGAATCTCAAGCCAGCTACTGGATTTTT +
Preference number: 3 (lower is better)
Translates to: LWGQILWKPCQV*ALESQASYWIF
Trigger: AAAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCTGGCCCCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR CCA 72 bp GGTTGCAACTTATGTCTGATGTTAGTACCCTGTGGCTaGAAGTGGTCAAAGCTACGCATTGATCTCCTCTAC +
Preference number: 3 (lower is better)
Translates to: GCNLCLMLVPCG*KWSKLRIDLLY
Trigger: GTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGGGTACTAACATCAGACATAAGTTGCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR CCA 72 bp AACTTATGTCTGATGTTAGTACCCTGTGGCTGGAAGTaGTCAAAGCTACGCATTGATCTCCTCTACTTCCAG +
Preference number: 3 (lower is better)
Translates to: NLCLMLVPCGWK*SKLRIDLLYFQ
Trigger: CTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGGGTACTAACATCAGACATAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTGTTTCAGCACCTTTaGACCACAACAAAAGCAAAG +
Preference number: 3 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLFQHL*TTTKAK
Trigger: CTTTGCTTTTGTTGTGGTCAAAAGGTGCTGAAACAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTTTTGATTTCAAGGTCTaGTCTTTAAGGGGAGCTGGG +
Preference number: 3 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRFDFKV*SLRGAG
Trigger: CCCAGCTCCCCTTAAAGACAAGACCTTGAAATCAAA...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTGCCTCAAAACAAATTaGAGTACAGCTACTTCTAAC +
Preference number: 3 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATCLKTN*STATSN
Trigger: GTTAGAAGTAGCTGTACTCAAATTTGTTTTGAGGCA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR TCA 72 bp AGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTaGATGCAGAATAAACAGGCCATGTTTCTGTCAAGA +
Preference number: 3 (lower is better)
Translates to: SDANKCPFHHHR*MQNKQAMFLSR
Trigger: TCTTGACAGAAACATGGCCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
3UTR TCA 72 bp AGCAGTTCACATGGATGTTGCCACAGCAAAGTAAGCTaGCATGTATTTGAGGTCATTTGCATGAGTCAAACT +
Preference number: 3 (lower is better)
Translates to: SSSHGCCHSKVS*HVFEVICMSQT
Trigger: AGTTTGACTCATGCAAATGACCTCAAATACATGTCAGCTTACTTTGCTGTGGCAACATCCATGTGAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAACCACAACTTCTCCTaGGCTTTTTGTTTAAACACC +
Preference number: 3 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFNHNFS*AFCLNT
Trigger: GGTGTTTAAACAAAAAGCCAAGGAGAAGTTGTGGTT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCTGTTCCCACCCGGCATaGGGAGGCTGGACGGGGCCA +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFCSHPA*GGWTGP
Trigger: TGGCCCCGTCCAGCCTCCCCATGCCGGGTGGGAACA...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATGGGGCTGCTGGGGCTaGTGCATCTGGAGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPWGCWG*CIWRSL
Trigger: GAGACTCCTCCAGATGCAGCAGCCCCAGCAGCCCCA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCAAGGCGGCTGCATCATaGCGCCTGAGCGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFKAAAS*RLSAAV
Trigger: TACAGCGGCGCTCAGGCGCCATGATGCAGCCGCCTT...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAGAGTCTGGGCTTGCCTaGGAAGTCGCTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPESGLA*EVAVAA
Trigger: AGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTC...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAGCTTGCCAGACCGTTTaGAGCTCACGGCCCATTCAC +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPACQTV*SSRPIH
Trigger: GTGAATGGGCCGTGAGCTGCAAACGGTCTGGCAAGC...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATGCTGCTGGGTCTGCTaGAAGCCTTGCCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPCCWVC*KPCLGN
Trigger: GTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGAGCCAGTCAGGGGCTaGAGGTACGGCGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATEPVRG*RYGEAC
Trigger: GCAGGCCTCGCCGTACCTGCAGCCCCTGACTGGCTC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCACCAGCATTGAGTAGTTaGTGCTGCGGGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPPALSS*CCGLRD
Trigger: ATCCCTCAGCCCGCAGCATCAACTACTCAATGCTGG...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGTCTCATGGGATCCTaGGGCAGGGGCACGGAGGGA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGLMGS*GRGTEG
Trigger: TCCCTCCGTGCCCCTGCCTCAGGATCCCATGAGACC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTAGGAAAAAGCCGGGCTaGTGGGGCTGGCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATRKKPG*WGWPTR
Trigger: CCTCGTGGGCCAGCCCCAGCAGCCCGGCTTTTTCCT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGAAGGCGGCCGTCTGCTaGTGCTGCTGGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVKAAVC*CCWVCC
Trigger: GCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTT...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATCTGAGAAGGCCAGCTaGACGGGGCTCATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGSEKAS*TGLMPG
Trigger: CCCTGGCATGAGCCCCGTGCAGCTGGCCTTCTCAGA...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTGGACGGGGCCACCTaGAGCAGATCCAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLDGAT*SRSRGE
Trigger: CTCACCCCTGGATCTGCTGCAGGTGGCCCCGTCCAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATGGAGGAGTCTCTGCTaGTGTCGAACTTGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPWRSLC*CRTCGC
Trigger: ACAGCCGCAAGTTCGACAGCAGCAGAGACTCCTCCA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAATCTGGAGGAGTCTCTaGTGCTGTCGAACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPIWRSL*CCRTCG
Trigger: GCCGCAAGTTCGACAGCAGCAGAGACTCCTCCAGAT...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCTGCTGGGGCTGCATTaGTTGGAGACCAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFLLGLH*LETKGL
Trigger: CAGACCCTTGGTCTCCAAGCAATGCAGCCCCAGCAG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCCGGCATGGGGAGGCTaGACGGGGCCACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFPAWGG*TGPPAA
Trigger: TGCTGCAGGTGGCCCCGTCCAGCCTCCCCATGCCGG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATTCAGCTCCACTGTGTaGCCTTGGGAGTTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPFSSTV*PWEFPS
Trigger: GCTTGGGAACTCCCAAGGCCACACAGTGGAGCTGAA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGCCCGAAGGCGGCCATaGTCTCTCATGTTAACCGGC +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGARRRP*SLMLTG
Trigger: GCCGGTTAACATGAGAGATCATGGCCGCCTTCGGGC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCCACTCGGCTGCTGCTaGATCTGTCTGAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFPLGCC*ICLSLS
Trigger: GGAAAGACTCAGACAGATTCAGCAGCAGCCGAGTGG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCGGCTCCCACTTCAATaGTGTTGTGAGCAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFRLPLQ*CCEQRL
Trigger: TAGCCGCTGCTCACAACAGCATTGAAGTGGGAGCCG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTAGGAAAAAGCCGGGCTaGTGGGGCTGGCCCACGAGG +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRRKKPG*WGWPTR
Trigger: CCTCGTGGGCCAGCCCCAGCAGCCCGGCTTTTTCCT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCACACTGCCAGCCTGCTaGTGCGATGTCTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFTLPAC*CDVCCK
Trigger: TTTGCAGCAGACATCGCAGCAGCAGGCTGGCAGTGT...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGGCTGCTGGGGCTGCTaGATCTGGAGGAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVGCWGC*IWRSLC
Trigger: GCAGAGACTCCTCCAGATGCAGCAGCCCCAGCAGCC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTAAAAAGCCGGGCTGCTaGGGCTGGCCCACGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATKKPGC*GWPTRL
Trigger: CAACCTCGTGGGCCAGCCCCAGCAGCCCGGCTTTTT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGCCTGGTCCCCCGGCTaGCCCTGTTGGAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRAWSPG*PCWKGR
Trigger: TCGGCCTTTCCAACAGGGCCAGCCGGGGGACCAGGC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGCCCGAAGGCGGCCATaGTCTCTCATGTTAACCGGC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFARRRP*SLMLTG
Trigger: GCCGGTTAACATGAGAGATCATGGCCGCCTTCGGGC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGTCTCTGCTCATAGCTaGGAAGCCCGAAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFVSAHS*EARRRP
Trigger: TGGCCGCCTTCGGGCTTCTCAGCTATGAGCAGAGAC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCACTTGATCAGCCACGTTaGTCGAACCATTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPLDQPR*SNHWHR
Trigger: TCTGTGCCAATGGTTCGAGCAACGTGGCTGATCAAG...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGAGGGAAGTGCGACATaGTGCACGACGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVEGSAT*CTTSSR
Trigger: CCTGGAGGACGTCGTGCAGCATGTCGCACTTCCCTC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATGGGACAAAGGAGCCTaGAGGGTCCAATCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGWDKGA*RVQSGA
Trigger: GGCTCCAGATTGGACCCTGCAGGCTCCTTTGTCCCA...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGCCGAGTCTGGGCTTaGCTGAGAAGTCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGRVWA*LRSRCC
Trigger: GCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTGCTGCTGCTGGGTCTaGTGCAAGCCTTGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATCCCWV*CKPCLG
Trigger: TCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAAGGCGGCCGTCTGCTaGTGCTGCTGGGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFKAAVC*CCWVCC
Trigger: GCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGACCAAGGCGGCCGTCTaGTGCTGCTGCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRTKAAV*CCCWVC
Trigger: GCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTACCAAGGCGGCCGTCTaGTGCTGCTGCTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRITKAAV*CCCWVC
Trigger: GCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCTGCCAGCCTGCTGCTaGGATGTCTGCTGCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVLPACC*DVCCKG
Trigger: GCCTTTGCAGCAGACATCGCAGCAGCAGGCTGGCAG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAAAGGGCTGCTGGGGCTaGATTGCTTGGAGACCAAGG +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGKGCWG*IAWRPR
Trigger: CCTTGGTCTCCAAGCAATGCAGCCCCAGCAGCCCTT...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGGCTTGCTCCACCTCTaGTGGCACAGGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRGLLHL*WHRDRA
Trigger: GGCCCTGTCCCTGTGCCACCAGAGGTGGAGCAAGCC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCCCGGCTGGCCCTGTTaGAAAGGCCGAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFPGWPC*KGRVWA
Trigger: AGCCCAGACTCGGCCTTTCCAACAGGGCCAGCCGGG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCACATTGTATAGCCCTGTaGCATGGTCTGTGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPHCIAL*HGLCLL
Trigger: CAGCAAGCACAGACCATGCCACAGGGCTATACAATG...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCACGGAGGGAAGGTTTaGATGTGCAGAAGTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFHGGKV*MCRSQH
Trigger: GTGCTGACTTCTGCACATCCAAACCTTCCCTCCGTG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAGAGCCTTCTGGACTTTaGGGCCAGATTCTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPEPSGL*GQILWK
Trigger: TTTCCAGAGAATCTGGCCCCAAAGTCCAGAAGGCTC...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGTTTGCCCGTTGCTTaGGGTAAGAAGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGLPVA*GKKQAW
Trigger: CCAGGCCTGCTTCTTACCTCAAGCAACGGGCAAACC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGAGTCTGGGCTTGCCTaGGAAGTCGCTGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATESGLA*EVAVAA
Trigger: AGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGCTTGCCAGACCGTTTaGAGCTCACGGCCCATTCAC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFACQTV*SSRPIH
Trigger: GTGAATGGGCCGTGAGCTGCAAACGGTCTGGCAAGC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTACAGCCATGGCCCTGTaGTTGCCAGACCGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATTAMAL*LPDRLQ
Trigger: CTGCAAACGGTCTGGCAAGCACAGGGCCATGGCTGT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCGAGGGGTTTACGACATaGTTGACCACACCACACAAC +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFEGFTT*LTTPHN
Trigger: GTTGTGTGGTGTGGTCAAGCATGTCGTAAACCCCTC...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGAAGTGCGACATGCTaGACGACGTCCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGSATC*TTSSRE
Trigger: TTCCCTGGAGGACGTCGTGCAGCATGTCGCACTTCC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAAGTGCGACATGCTaGACGACGTCCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATGSATC*TTSSRE
Trigger: TTCCCTGGAGGACGTCGTGCAGCATGTCGCACTTCC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAAGTTCTAACCAGGATTaGCTCAGTGTCCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPSSNQD*LSVHCS
Trigger: TGAGCAGTGGACACTGAGGCAATCCTGGTTAGAACT...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTGCTGGAGGTAGTAACTaGGGGGCTTGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRAGGSN*GAWAWG
Trigger: ACCCCATGCCCAAGCCCCGCAGTTACTACCTCCAGC...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGCCGTCTGCTGCTGCTaGTGGGTCTGCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIAVCCC*WVCCKP
Trigger: AGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTGGTTGCTGGAAAGCTaGTTCTGGAGCTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFWLLES*FWSCRT
Trigger: GGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTGGGAAACAAGGGCTaGTGGGGCTGCATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLGNKG*WGCIAW
Trigger: CCAAGCAATGCAGCCCCAGCAGCCCTTGTTTCCCAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGCCATCGCCCGTGCTaGAGGCCATGTGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATGHRPC*RPCGKS
Trigger: ACTTTTACCACATGGCCTCCAGCACGGGCGATGGCC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGTTTTGCCACAGCCATaGCCCTGTGCTTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFVLPQP*PCACQT
Trigger: GGTCTGGCAAGCACAGGGCCATGGCTGTGGCAAAAC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATCCTTGCACAGAAGTTaGCAACCTGGCGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGSLHRS*QPGDEG
Trigger: CCCCTCATCGCCAGGTTGCCAACTTCTGTGCAAGGA...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCTGGTTCCTGAGAAACTaGAGATGTGGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFWFLRN*RCGLFL
Trigger: GAGGAAGAGCCCACATCTCCAGTTTCTCAGGAACCA...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTAAAAAGCCGGGCTGCTaGGGCTGGCCCACGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIKKPGC*GWPTRL
Trigger: CAACCTCGTGGGCCAGCCCCAGCAGCCCGGCTTTTT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATATAGCCCTGTGGCATaGTCTGTGCTTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGYSPVA*SVLAAA
Trigger: GGCTGCAGCAAGCACAGACCATGCCACAGGGCTATA...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGTCTCTGCTCATAGCTaGGAAGCCCGAAGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIVSAHS*EARRRP
Trigger: TGGCCGCCTTCGGGCTTCTCAGCTATGAGCAGAGAC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAAGACATCATGGCGGATaGACTCGCAGAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGRHHGG*TRRRAA
Trigger: TGCTGCTCTTCTGCGAGTTCATCCGCCATGATGTCT...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGCCGAGTTGAGGCAGTaGCTGACAAATCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFAELRQ*LTNLLE
Trigger: CTCGAGGAGATTTGTCAGTCACTGCCTCAACTCGGC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCAGGGGAAGAACATTCTaGGGGGTTTACGACATGCTT +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFRGRTF*GVYDML
Trigger: AAGCATGTCGTAAACCCCTCAGAATGTTCTTCCCCT...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGATCTTGCCCAGCATTaGGTAGTTGATGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATDLAQH*VVDAAG
Trigger: GCCCGCAGCATCAACTACTCAATGCTGGGCAAGATC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGGAGCTGGGTTCTTCTaGCCCTCAAACAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVGAGFF*PSNKSH
Trigger: GTGGGACTTGTTTGAGGGTCAGAAGAACCCAGCTCC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCTTGCCCGAACCTGCTaGTTGAAAGCCGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATLARTC*LKAVFP
Trigger: TGGGAACACGGCTTTCAATCAGCAGGTTCGGGCAAG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCGGGTTTTCATCACACTaGCTTTCAGTTAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFGFSSH*LSVSPI
Trigger: GATGGGGCTAACTGAAAGTCAGTGTGATGAAAACCC...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCAGGGCCATCGCCCGTaGTGGAGGCCATGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFQGHRP*WRPCGK
Trigger: TTTACCACATGGCCTCCAGCACGGGCGATGGCCCTG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATCCGTTGATGTTCAGTaGTGGCTCCATGAGATCAAA +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPSVDVQ*WLHEIK
Trigger: TTTGATCTCATGGAGCCAGCACTGAACATCAACGGA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGAGGGAAGTGCGACATaGTGCACGACGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINREGSAT*CTTSSR
Trigger: CCTGGAGGACGTCGTGCAGCATGTCGCACTTCCCTC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCGGCTCCCACTTCAATaGTGTTGTGAGCAGCGGCTA +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATRLPLQ*CCEQRL
Trigger: TAGCCGCTGCTCACAACAGCATTGAAGTGGGAGCCG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACCAACCATACACCCCTaGGTTCGGAGGAACTTAGGA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGPTIHP*VRRNLG
Trigger: TCCTAAGTTCCTCCGAACGCAGGGGTGTATGGTTGG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGCTGGAGGTAGTAACTaGGGGGCTTGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFAGGSN*GAWAWG
Trigger: ACCCCATGCCCAAGCCCCGCAGTTACTACCTCCAGC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTGAGAAGTCGCTGTTaGTGCTGCTGCTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLRSRC*CCCCRS
Trigger: GCTTCTGCAGCAGCAGCAGCAACAGCGACTTCTCAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATACGGAGTCACTCCTTaGTGTGGCTGGTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGYGVTP*CGWLLE
Trigger: TTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTA...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCTGTGGCATGGTCTGTaGTTGCTGCAGCCCTGGATA +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVLWHGL*LLQPWI
Trigger: TATCCAGGGCTGCAGCAAGCACAGACCATGCCACAG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGAGACAGGACCACACTaGCAGCCTGCTGCTGCGATG +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIETGPH*QPAAAM
Trigger: CATCGCAGCAGCAGGCTGGCAGTGTGGTCCTGTCTC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCACGGGGTTGGAATGTaGGGCCGGATAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFHGVGM*GRIGSG
Trigger: TCCAGAGCCTATCCGGCCGCACATTCCAACCCCGTG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGTTGCTCCACCTCTGGTaGCACAGGGACAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRLLHLW*HRDRAI
Trigger: GATGGCCCTGTCCCTGTGCCACCAGAGGTGGAGCAA...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTGCCTGGGAAACTGTTaGAAAGGCCGAGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFCLGNC*KGRVWA
Trigger: AGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGTCTGCTGCTGCTGCTaGGTCTGCTGCAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRVCCCC*VCCKPC
Trigger: GCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGAC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAACTCCTTGCTGTGGCTaGTTGCTGGAAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGTPCCG*LLESCF
Trigger: GAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGT...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGTCCTATCATCATGTaGGGTGAGTGGGCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATGPIIM*GEWAAR
Trigger: CCTTGCTGCCCACTCACCCCACATGATGATAGGACC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACTCTGGAGTTATAGCTaGGAGACAGGACCACACTGC +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGLWSYS*ETGPHC
Trigger: GCAGTGTGGTCCTGTCTCCCAGCTATAACTCCAGAG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCGGCCGGATAGGCTCTaGAGTTATAGCTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVRPDRL*SYSWET
Trigger: TGTCTCCCAGCTATAACTCCAGAGCCTATCCGGCCG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTAACTGTGATAGCGCCTaGGAACAGCCACGATGCAGA +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATNCDSA*EQPRCR
Trigger: TCTGCATCGTGGCTGTTCTCAGGCGCTATCACAGTT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGCAGGTAAGTACCAGTaGGAGGAAGGGTTGTTGACT +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGAGKYQ*EEGLLT
Trigger: AGTCAACAACCCTTCCTCTCACTGGTACTTACCTGC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCCTGAAGTAATGATCTaGAGGAGTAGCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATPEVMI*RSSRAQ
Trigger: CTGGGCCCTGCTACTCCTTCAGATCATTACTTCAGG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTGCTGCTCCTCGTACTTaGTCACTCTTCGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRAAPRT*SLFGPL
Trigger: GAGTGGACCGAAGAGTGATCAAGTACGAGGAGCAGC...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGTTTTTCCCTGATCTaGCAGCTCAGCGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGFSLI*QLSGLP
Trigger: AGGAAGTCCGCTGAGCTGTCAGATCAGGGAAAAACC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGTTGTGGTTTTTCCCTaGTCTGACAGCTCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATVVVFP*SDSSAD
Trigger: GTCCGCTGAGCTGTCAGATCAGGGAAAAACCACAAC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTACTGCTGCTGCGATGTaGTTGCATGAAGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFTAAAM*LHEEKA
Trigger: CGCCTTCTCTTCATGCAATCACATCGCAGCAGCAGT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGCAGATTCAGAAGTGTaGAGGATGCCCATACGGAGT +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGADSEV*RMPIRS
Trigger: ACTCCGTATGGGCATCCTTCACACTTCTGAATCTGC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCCCCTGCCAATCATTTaGGACATGTGGAATAGCGCC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVPLPII*DMWNSA
Trigger: GGCGCTATTCCACATGTCTCAAATGATTGGCAGGGG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGAGGACACATGGAAGTaGGCAGCTTCACTTACAAGG +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGEDTWK*AASLTR
Trigger: CCTTGTAAGTGAAGCTGCTCACTTCCATGTGTCCTC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCATTGCTTCATGGCTTaGTCCACCTCTGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFHCFMA*STSGGT
Trigger: TGTGCCACCAGAGGTGGAGCAAGCCATGAAGCAATG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCGTGTCTCCATGGAATTaGTGGAATCAGTTCGGTCAA +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFVSPWN*WNQFGQ
Trigger: TTGACCGAACTGATTCCAGCAATTCCATGGAGACAC...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGCCATGGCCCTGTGCTTaGCAGACCGTTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRPWPCA*QTVCSS
Trigger: TGAGCTGCAAACGGTCTGGCAAGCACAGGGCCATGG...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCCATGGCCCTGTGCTTaGCAGACCGTTTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFPWPCA*QTVCSS
Trigger: TGAGCTGCAAACGGTCTGGCAAGCACAGGGCCATGG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCACATAGAGAAGGATTGTaGGCTGGTTACATTCATGAC +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPHREGL*AGYIHD
Trigger: GTCATGAATGTAACCAGCGCACAATCCTTCTCTATG...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTGGGACAAAGGAGCCTaGAGGGTCCAATCTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIWDKGA*RVQSGA
Trigger: GGCTCCAGATTGGACCCTGCAGGCTCCTTTGTCCCA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGAGTCGCTGTTGCTGCTaGTGCTGCAGAAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVSRCCC*CCRSFI
Trigger: GATGAAGCTTCTGCAGCAGCAGCAGCAACAGCGACT...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTAGAAGTCGCTGTTGCTaGTGCTGCTGCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFRSRCC*CCCRSF
Trigger: GAAGCTTCTGCAGCAGCAGCAGCAACAGCGACTTCT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTGGTTGCTGGAAAGCTaGTTCTGGAGCTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFWLLES*FWSCRT
Trigger: GGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTTGCTGTGGCTGGTTaGTGGAAAGCTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLAVAG*WKAASG
Trigger: TCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGGGGAGGGCCGTGCTTaGGCAGCAAAGAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEGEGRA*AAKRAA
Trigger: GGCTGCTCTCTTTGCTGCGCAAGCACGGCCCTCCCC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACTGAGGGGAGGGCCGTaGTTGCGCAGCAAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILRGGP*LRSKES
Trigger: GCTCTCTTTGCTGCGCAAGCACGGCCCTCCCCTCAG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTTGCTGCTGTCGAACTTaGGGCTGTCTGGGTCTCATG +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRCCCRT*GCLGLM
Trigger: CATGAGACCCAGACAGCCGCAAGTTCGACAGCAGCA...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATTCTTTCCCGTGTCCTaGAAAGTGTTAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPFFPVS*KVLSFS
Trigger: ACTGAAGCTTAACACTTTCCAGGACACGGGAAAGAA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGGCCATCGCCCGTGCTaGAGGCCATGTGGTAAAAGT +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRGHRPC*RPCGKS
Trigger: ACTTTTACCACATGGCCTCCAGCACGGGCGATGGCC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGTGCGGGGCTTGGGCATaGGGTGTGTGTGATACAGCA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRCGAWA*GVCDTA
Trigger: TGCTGTATCACACACACCCCATGCCCAAGCCCCGCA...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTGGAAAGGCCGAGTCTaGGCTTGCCTGAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIWKGRV*ACLRSR
Trigger: GCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCCACACCAAGGCACTTaGGCAACAGAGAGTGACAGT +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVPHQGT*ATESDS
Trigger: ACTGTCACTCTCTGTTGCCCAAGTGCCTTGGTGTGG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
3UTR CAA 72 bp CCCTGCCAATCATTTGAGACATGTGGAATAGCGCCCTaGGGTTTTCATCACACTGACTTTCAGTTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PCQSFETCGIAP*GFHHTDFQLAP
Trigger: TGGGGCTAACTGAAAGTCAGTGTGATGAAAACCCAAGGGCGCTATTCCACATGTCTCAAATGATTGGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTTGGCACTTGTCAAATaGCCACCGAACTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVLALVK*PPNFHC
Trigger: GCAGTGGAAGTTCGGTGGTCATTTGACAAGTGCCAA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGGTTTACGACATGCTTaGCCACACCACACAACCCTT +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVGLRHA*PHHTTL
Trigger: AAGGGTTGTGTGGTGTGGTCAAGCATGTCGTAAACC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAAGGGGAAGAACATTCTaGGGGGTTTACGACATGCTT +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGRGRTF*GVYDML
Trigger: AAGCATGTCGTAAACCCCTCAGAATGTTCTTCCCCT...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCTCCAAATTTACTTCTaGGGTGGCTACATGACACAT +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFLQIYF*GGYMTH
Trigger: ATGTGTCATGTAGCCACCTCAGAAGTAAATTTGGAG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCGGTTTGCTTTACTTTTaGACAGGCACTACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFGLLYF*TGTTEE
Trigger: CTCTTCAGTAGTGCCTGTTCAAAAGTAAAGCAAACC...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGTTGATGCTGCGGGCTaGGGGATTCTCAATAAAATC +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGVDAAG*GILNKI
Trigger: GATTTTATTGAGAATCCCTCAGCCCGCAGCATCAAC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTGGCCGCATTGTCACTaGGGATCTTGCCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFWPHCH*GSCPAL
Trigger: CAATGCTGGGCAAGATCCTCAGTGACAATGCGGCCA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTAACCCCCAGCCATTCTaGACTAAGAACAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFNPQPF*TKNSAA
Trigger: TGCTGCACTGTTCTTAGTTCAGAATGGCTGGGGGTT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACCCCCACACGTGATTTaGAGAACAACAAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGPPHVI*RTTKSL
Trigger: AAGGCTCTTTGTTGTTCTTCAAATCACGTGTGGGGG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGGAGCTCGGAAGAGATaGAGCAAGAGTCGGCATGTC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIGARKR*SKSRHV
Trigger: GACATGCCGACTCTTGCTTCATCTCTTCCGAGCTCC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCGAGAGGAAGGGTTGTTaGCTCAAAAGAGACATACTT +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFERKGC*LKRDIL
Trigger: AAGTATGTCTCTTTTGAGTCAACAACCCTTCCTCTC...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGCTGCTCCTCGTACTTaGTCACTCTTCGGTCCACTC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIAAPRT*SLFGPL
Trigger: GAGTGGACCGAAGAGTGATCAAGTACGAGGAGCAGC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATTGAGGTCATTTGCATaGGTCAAACTTTGCAATGAG +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPLRSFA*VKLCNE
Trigger: CTCATTGCAAAGTTTGACTCATGCAAATGACCTCAA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACCACCGAACTTCCACTaGACGGCCTCTTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGPPNFH*TASLFY
Trigger: ATAAAACAAAGAGGCCGTGCAGTGGAAGTTCGGTGG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACTTCATCACGCTCTTTaGCGACTCCATAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGLHHAL*RLHREG
Trigger: TCCTTCTCTATGGAGTCGGCAAAGAGCGTGATGAAG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCTTCAGCTGATGCCTTaGTTCATCACGCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVLQLMP*FITLFA
Trigger: GGCAAAGAGCGTGATGAAGCAAGGCATCAGCTGAAG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTTCAGCTGATGCCTTaGTTCATCACGCTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLQLMP*FITLFA
Trigger: GGCAAAGAGCGTGATGAAGCAAGGCATCAGCTGAAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGAAGAAGAACCCAAGTaGTGTCCCTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFEEEPK*CPFSSS
Trigger: AGAGCTGGAGAAGGGACAGCACTTGGGTTCTTCTTC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCACGGGGACACCTTCTaGTTCGTAGAGACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFHGDTF*FVETWR
Trigger: TCTCCAGGTCTCTACGAAGCAGAAGGTGTCCCCGTG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTCACGGGGACACCTTCTaGTTCGTAGAGACCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIHGDTF*FVETWR
Trigger: TCTCCAGGTCTCTACGAAGCAGAAGGTGTCCCCGTG...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGGCCGAGTCTGGGCTTaGCTGAGAAGTCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIGRVWA*LRSRCC
Trigger: GCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGCCGTCTGCTGCTGCTaGTGGGTCTGCTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEAVCCC*WVCCKP
Trigger: AGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCAGAAGTGTGAAGGATaGCCATACGGAGTCACTCCT +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVQKCEG*PYGVTP
Trigger: AGGAGTGACTCCGTATGGGCATCCTTCACACTTCTG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAACCACACTGCCAGCCTaGTGCTGCGATGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKITTLPA*CCDVCC
Trigger: GCAGCAGACATCGCAGCAGCAGGCTGGCAGTGTGGT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGGAAGGTTTGGATGTaGAGAAGTCAGCACAGCATC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGKVWM*RSQHSI
Trigger: GATGCTGTGCTGACTTCTGCACATCCAAACCTTCCC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATCTGGGATATACAAATaGACAGCAAAGAACCCACTT +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPSGIYK*TAKNPL
Trigger: AAGTGGGTTCTTTGCTGTGCATTTGTATATCCCAGA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGGCTTGCTCCACCTCTaGTGGCACAGGGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFGLLHL*WHRDRA
Trigger: GGCCCTGTCCCTGTGCCACCAGAGGTGGAGCAAGCC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTTCACATTCACTGTTTaGGTCCGACAAAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFFTFTV*VRQRGG
Trigger: GCCCCCTCTTTGTCGGACCCAAACAGTGAATGTGAA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCACATGTATGCGTCATaGGAGAAGACATCATGGCGG +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVHMYAS*EKTSWR
Trigger: CCGCCATGATGTCTTCTCCCATGACGCATACATGTG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCAACCCCTGTCTCTGTaGTGCTCTTCTTATTTAGAA +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFQPLSL*CSSYLE
Trigger: TTCTAAATAAGAAGAGCACCACAGAGACAGGGGTTG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCCAGGACAAAGGAGCTaGGTTCTTCTGACCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVPGQRS*VLLTLK
Trigger: TTTGAGGGTCAGAAGAACCCAGCTCCTTTGTCCTGG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCCACAAGGTGGACTGTaGATGGTGCATCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVPQGGL*MVHHLG
Trigger: TCCCAAATGATGCACCATCCACAGTCCACCTTGTGG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGAGCTTGTTTGGTGTTaGTTGGGACAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATELVWC*LGQRSL
Trigger: CAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGCTGTGGCTGGTTGCTaGAAAGCTGCTTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFAVAGC*KAASGA
Trigger: AGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCTGGCAATAAATAGTTaGACGATTCCACTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFLAINS*TIPLQF
Trigger: GAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGGGCAGCAAGGAGGTTaGGGCTATCGCTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIGQQGG*GYRSAA
Trigger: TGCTGCTGAGCGATAGCCCCAACCTCCTTGCTGCCC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGTCTTTAAGGGGAGCTaGGGTCTCGCTCCATCTTAT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFVFKGS*GLAPSY
Trigger: ATAAGATGGAGCGAGACCCCAGCTCCCCTTAAAGAC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTTAGTACCCTGTGGCTaGAAGTGGTCAAAGCTACGC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLVPCG*KWSKLR
Trigger: GCGTAGCTTTGACCACTTCCAGCCACAGGGTACTAA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGATGTTAGTACCCTGTaGCTGGAAGTGGTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGDVSTL*LEVVKA
Trigger: AGCTTTGACCACTTCCAGCCACAGGGTACTAACATC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTAGGCACAAGTCATCTTaGTCAGCCACGTTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRRHKSS*SATLLE
Trigger: TTCGAGCAACGTGGCTGATCAAGATGACTTGTGCCT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTTTGGCACTTGTCAAATaGCCACCGAACTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRLALVK*PPNFHC
Trigger: GCAGTGGAAGTTCGGTGGTCATTTGACAAGTGCCAA...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGTTCGGTCAAAACAGTaGCGATCCAAAACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGVRSKQ*RSKTSN
Trigger: GTTGGAAGTTTTGGATCGTCACTGTTTTGACCGAAC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAGACATCATGGCGGATaGACTCGCAGAAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRRHHGG*TRRRAA
Trigger: TGCTGCTCTTCTGCGAGTTCATCCGCCATGATGTCT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGTAATCTTCTTCAGCTaGTGCCTTGCTTCATCACGC +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATVIFFS*CLASSR
Trigger: GCGTGATGAAGCAAGGCATCAGCTGAAGAAGATTAC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAACTGTGATAGCGCCTaGGAACAGCCACGATGCAGA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRNCDSA*EQPRCR
Trigger: TCTGCATCGTGGCTGTTCTCAGGCGCTATCACAGTT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAAACACCTGGGCTGTCTaGTCAGGATTCAAGATTAGA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGNTWAV*SGFKIR
Trigger: TCTAATCTTGAATCCTGATCAGACAGCCCAGGTGTT...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGTTGATGCTGCGGGCTaGGGGATTCTCAATAAAATC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFVDAAG*GILNKI
Trigger: GATTTTATTGAGAATCCCTCAGCCCGCAGCATCAAC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCCTACCCATTCCTGTTaGCAGATAGTCCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATPTHSC*QIVLST
Trigger: TGTACTGAGGACTATCTGTCAACAGGAATGGGTAGG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCCTGAAGTAATGATCTaGAGGAGTAGCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFPEVMI*RSSRAQ
Trigger: CTGGGCCCTGCTACTCCTTCAGATCATTACTTCAGG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGGTTTTTCCCTGATCTaGCAGCTCAGCGGACTTCCT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFGFSLI*QLSGLP
Trigger: AGGAAGTCCGCTGAGCTGTCAGATCAGGGAAAAACC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGTTGTGGTTTTTCCCTaGTCTGACAGCTCAGCGGAC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIVVVFP*SDSSAD
Trigger: GTCCGCTGAGCTGTCAGATCAGGGAAAAACCACAAC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTGCGATGTGATTGCATaGAGAGAAGGCGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRICDVIA*REGGCI
Trigger: GATGCAGCCGCCTTCTCTTCATGCAATCACATCGCA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGTAGGCCTGCCTGCATaGTTCACATTTGTAAACCTA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGVGLPA*FTFVNL
Trigger: TAGGTTTACAAATGTGAATCATGCAGGCAGGCCTAC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTAAACCATGTCAAGTGTaGGCACTGGAATCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFKPCQV*ALESQA
Trigger: GGCTTGAGATTCCAGTGCTCACACTTGACATGGTTT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTACAGGAAAGAAAATCTaGGAAGGCCAGCTGCACGGG +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFTGKKI*EGQLHG
Trigger: CCCGTGCAGCTGGCCTTCTCAGATTTTCTTTCCTGT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACCCGAACCTGCTGATTaGAAGCCGTGTTCCCACCCG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEPEPAD*KPCSHP
Trigger: CGGGTGGGAACACGGCTTTCAATCAGCAGGTTCGGG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCCCCTGTCTCTGTGGTaGTCTTCTTATTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFPLSLW*SSYLEF
Trigger: AAATTCTAAATAAGAAGAGCACCACAGAGACAGGGG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATCGCAAGTTCGAATTTaGAGGCATCACGTTATTATA +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPSQVRI*RHHVII
Trigger: TATAATAACGTGATGCCTGCAAATTCGAACTTGCGA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTTCAGCACTCTTCCTTaGACAGAAGTTGGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFFSTLP*TEVGNL
Trigger: CAGGTTGCCAACTTCTGTGCAAGGAAGAGTGCTGAA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTAGTTGCAATGCTTCGTaGATCATCTGCCGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFSCNAS*IICRAF
Trigger: AAAAGCGCGGCAGATGATGCACGAAGCATTGCAACT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGTGGACTGTGGATGGTaGATCATTTGGGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVVDCGW*IIWEEI
Trigger: TATCTCCTCCCAAATGATGCACCATCCACAGTCCAC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTCGCTGTTGCTGCTGCTaGTGCAGAAGCTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIRCCCC*CRSFIC
Trigger: ACAGATGAAGCTTCTGCAGCAGCAGCAGCAACAGCG...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGTCGCTGTTGCTGCTaGTGCTGCAGAAGCTTCATC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFSRCCC*CCRSFI
Trigger: GATGAAGCTTCTGCAGCAGCAGCAGCAACAGCGACT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTAGAAGTCGCTGTTGCTaGTGCTGCTGCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIRSRCC*CCCRSF
Trigger: GAAGCTTCTGCAGCAGCAGCAGCAACAGCGACTTCT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTCTTGCTGTGGCTGGTTaGTGGAAAGCTGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRILAVAG*WKAASG
Trigger: TCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAG...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTACGGAGTCACTCCTTaGTGTGGCTGGTTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFYGVTP*CGWLLE
Trigger: TTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTGCTGCGATGTCTGCTaGAAAGGCATCTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFCCDVC*KGICVP
Trigger: TGGGACACAGATGCCTTTGCAGCAGACATCGCAGCA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGTTTTGCCACAGCCATaGCCCTGTGCTTGCCAGACC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIVLPQP*PCACQT
Trigger: GGTCTGGCAAGCACAGGGCCATGGCTGTGGCAAAAC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGAAAACAGGCAAACTaGATCCAGCAAGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGKQAN*IQQERM
Trigger: CATCCTCTCTTGCTGGATCCAGTTTGCCTGTTTTCC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTTGGGAGAAGACATCATaGCGGATGAACTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRWEKTS*RMNSQK
Trigger: CTTCTGCGAGTTCATCCGCCATGATGTCTTCTCCCA...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTGCCCAACGAAGTGTTaGCATTCTCACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVCPTKC*HSHRIL
Trigger: GAGAATCCTGTGAGAATGCCAACACTTCGTTGGGCA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTAACTTCCTGCCAGGCTaGAGGATTTTAGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATNFLPG*RILGAV
Trigger: AACTGCTCCTAAAATCCTCCAGCCTGGCAGGAAGTT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTAGCGGACTTCCTTTCTaGTTCCTGAGAAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATSGLPF*FLRNWR
Trigger: TCTCCAGTTTCTCAGGAACCAGAAAGGAAGTCCGCT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTCCACAAGGTGGACTGTaGATGGTGCATCATTTGGGA +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRPQGGL*MVHHLG
Trigger: TCCCAAATGATGCACCATCCACAGTCCACCTTGTGG...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCAATCTGGAGCCACCTaGAGTAAGAGATTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATQSGAT*SKRLVL
Trigger: CAGAACCAATCTCTTACTCCAGGTGGCTCCAGATTG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCAATCTGGAGCCACCTaGAGTAAGAGATTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFQSGAT*SKRLVL
Trigger: CAGAACCAATCTCTTACTCCAGGTGGCTCCAGATTG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAAAGGCGGCTGCATCATaGCGCCTGAGCGCCGCTGTA +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLKAAAS*RLSAAV
Trigger: TACAGCGGCGCTCAGGCGCCATGATGCAGCCGCCTT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATGGAAAGGCCGAGTCTaGGCTTGCCTGAGAAGTCGC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIWKGRV*ACLRSR
Trigger: GCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATTCAAATCAGTAGTTTaGTCCAGCACAGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPFKSVV*SSTVWK
Trigger: TTTCCAAACTGTGCTGGACCAAACTACTGATTTGAA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGTCCACTGTGTGGCCTTaGGAGTTCCCAAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRSTVWP*EFPSQK
Trigger: TTTCTGGCTTGGGAACTCCCAAGGCCACACAGTGGA...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCCTTCCTGGAACATGTaGAATGCTAGCTTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVPSWNM*NASFSL
Trigger: CAACGAAAAGCTAGCATTTCACATGTTCCAGGAAGG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCCTTCCTGGAACATGTaGAATGCTAGCTTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFPSWNM*NASFSL
Trigger: CAACGAAAAGCTAGCATTTCACATGTTCCAGGAAGG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTCCAGCAAGAGAGGATaGAGAAATAGACTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVSSKRG*RNRLLL
Trigger: GAGAAGGAGTCTATTTCTTCATCCTCTCTTGCTGGA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGAATCTCCTCGAGATATaGGGGTACACATGTATGCGT +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVNLLEI*GYTCMR
Trigger: ACGCATACATGTGTACCCTCATATCTCGAGGAGATT...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACGCTGGTTACATTCATaGCTTGAAGATTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGRWLHS*LEDSSR
Trigger: TCTGGATGAATCTTCAAGTCATGAATGTAACCAGCG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTAGTCAATTAGTCCGTTaGTGTTCAGTGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRSQLVR*CSVLAP
Trigger: TGGAGCCAGCACTGAACATCAACGGACTAATTGACT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACCAGCATTGAGTAGTTaGTGCTGCGGGCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIPALSS*CCGLRD
Trigger: ATCCCTCAGCCCGCAGCATCAACTACTCAATGCTGG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTACTTCAATGCTGTTGTaGGCAGCGGCTAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRITSMLL*AAAKRC
Trigger: ACACCTCTTAGCCGCTGCTCACAACAGCATTGAAGT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTACTTCAATGCTGTTGTaGGCAGCGGCTAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFTSMLL*AAAKRC
Trigger: ACACCTCTTAGCCGCTGCTCACAACAGCATTGAAGT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGCAGGTAAGTACCAGTaGGAGGAAGGGTTGTTGACT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFAGKYQ*EEGLLT
Trigger: AGTCAACAACCCTTCCTCTCACTGGTACTTACCTGC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGTAAGAGATTGGTTCTaGAGGAAAAAGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFVRDWF*RKKPGC
Trigger: GCAGCCCGGCTTTTTCCTTCAGAACCAATCTCTTAC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTTTCACCATCACAGGTaGATGCAGAATAAACAGGCC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVFHHHR*MQNKQA
Trigger: GGCCTGTTTATTCTGCATTCACCTGTGATGGTGAAA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTAAACCATGTCAAGTGTaGGCACTGGAATCTCAAGCC +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRKPCQV*ALESQA
Trigger: GGCTTGAGATTCCAGTGCTCACACTTGACATGGTTT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCATAAGGAAATTTTTCTaGGCAGGAATCGTTGCTCTA +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFIRKFF*AGIVAL
Trigger: TAGAGCAACGATTCCTGCTCAGAAAAATTTCCTTAT...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGAAATCTTGGCCAACTaGTCTCGAAGATATCTGGTA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGEILAN*SRRYLV
Trigger: TACCAGATATCTTCGAGAGCAGTTGGCCAAGATTTC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTACAGGGCCATCGCCCGTaGTGGAGGCCATGTGGTAAA +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLQGHRP*WRPCGK
Trigger: TTTACCACATGGCCTCCAGCACGGGCGATGGCCCTG...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAACAGCCATGGCCCTGTaGTTGCCAGACCGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGETAMAL*LPDRLQ
Trigger: CTGCAAACGGTCTGGCAAGCACAGGGCCATGGCTGT...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACTTCTCCAGGAGTTTTaGCACAGCCATGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILLQEF*HSHGPV
Trigger: CACAGGGCCATGGCTGTGGCAAAACTCCTGGAGAAG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGAGGGGTTTACGACATaGTTGACCACACCACACAAC +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINREGFTT*LTTPHN
Trigger: GTTGTGTGGTGTGGTCAAGCATGTCGTAAACCCCTC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCGAATACCTCTATTGTTaGCTTTGCAATATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFEYLYC*LCNIVQ
Trigger: CTGGACAATATTGCAAAGGCAACAATAGAGGTATTC...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACTGAGAAGTCGCTGTTaGTGCTGCTGCTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILRSRC*CCCCRS
Trigger: GCTTCTGCAGCAGCAGCAGCAACAGCGACTTCTCAG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCTGCTGGGTCTGCTaGAAGCCTTGCCTGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGECCWVC*KPCLGN
Trigger: GTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGGGAGTAGGCCTGCCTaGATGATTCACATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVGSRPA*MIHICK
Trigger: TTTACAAATGTGAATCATGCAGGCAGGCCTACTCCC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGATCTCCAGTGAAGGCTaGCTGATTATTGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVISSEG*LIIEAL
Trigger: CAAGGCTTCAATAATCAGCCAGCCTTCACTGGAGAT...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATTGCTCCACCTCTGGTaGCACAGGGACAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLLLHLW*HRDRAI
Trigger: GATGGCCCTGTCCCTGTGCCACCAGAGGTGGAGCAA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTATTCCCATTGCTTCATaGCTTGCTCCACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIIPIAS*LAPPLV
Trigger: CACCAGAGGTGGAGCAAGCCATGAAGCAATGGGAAT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTCCACAGCTTCATCGTTaGGCGCAACCTCTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIPQLHR*AQPLGY
Trigger: ATAACCAAGAGGTTGCGCCCAACGATGAAGCTGTGG...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTTCACATTCACTGTTTaGGTCCGACAAAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFFTFTV*VRQRGG
Trigger: GCCCCCTCTTTGTCGGACCCAAACAGTGAATGTGAA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACACAGTCTCCAGTGTTaGAAATGTCTCCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGHSLQC*KCLLFV
Trigger: AACAAACAGGAGACATTTCCAACACTGGAGACTGTG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTATCCATCATGAAGTCTaGATCCCATCGCAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFIHHEV*IPSQVR
Trigger: TCGAACTTGCGATGGGATCCAGACTTCATGATGGAT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCACGTATTCTCTTAAATTaGCAGTTTCTATGGAAATGC +
Preference number: 4 (lower is better)
Translates to: PVAGSGQSYALISSTSRPRILLN*QFLWKC
Trigger: GCATTTCCATAGAAACTGCCAATTTAAGAGAATACG...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTACTTCCAATACTGTTTaGGTTGAAGAGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATTSNTV*VEEAHA
Trigger: GGCATGAGCCTCTTCAACCCAAACAGTATTGGAAGT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACAGTCTGTAGTCCACTaGGTGCTCCTCTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEQSVVH*VLLCTV
Trigger: CACGGTGCAGAGGAGCACCCAGTGGACTACAGACTG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGCCAGGACAAAGGAGCTaGGTTCTTCTGACCCTCAAA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRPGQRS*VLLTLK
Trigger: TTTGAGGGTCAGAAGAACCCAGCTCCTTTGTCCTGG...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGAGAAACTGGAGATGTaGGCTCTTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFEKLEM*ALPLPP
Trigger: AGGAGGAAGAGGAAGAGCCCACATCTCCAGTTTCTC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGAGAAACTGGAGATGTaGGCTCTTCCTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINREKLEM*ALPLPP
Trigger: AGGAGGAAGAGGAAGAGCCCACATCTCCAGTTTCTC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAAGGTGGACTGTGGATaGTGCATCATTTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRKVDCG*CIIWEE
Trigger: CTCCTCCCAAATGATGCACCATCCACAGTCCACCTT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTGTAACCCCACAAGGTaGACTGTGGATGGTGCATCA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRICNPTR*TVDGAS
Trigger: TGATGCACCATCCACAGTCCACCTTGTGGGGTTACA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTTGTTTGGTGTTGGTTaGGACAAAGGAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRILFGVG*DKGACR
Trigger: CCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGAGCTTGTTTGGTGTTaGTTGGGACAAAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFELVWC*LGQRSL
Trigger: CAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGTCTGCTGCTGCTGCTaGGTCTGCTGCAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLVCCCC*VCCKPC
Trigger: GCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGAC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGGGGCTGCTGCATCTaGAGGAGTCTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEWGCCI*RSLCCC
Trigger: ACAGCAGCAGAGACTCCTCCAGATGCAGCAGCCCCA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGCCCTGTGGCTGGAAGTaGTCAAAGCTACGCATTGAT +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRPCGWK*SKLRID
Trigger: ATCAATGCGTAGCTTTGACCACTTCCAGCCACAGGG...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCCAAACCTCCGATTCTaGGATATACAAATGCACAGC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFPNLRF*DIQMHS
Trigger: GCTGTGCATTTGTATATCCCAGAATCGGAGGTTTGG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCTTCTCACAATTAACTaGCATTCTTCTGCCCAACGA +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVLLTIN*HSSAQR
Trigger: TCGTTGGGCAGAAGAATGTCAGTTAATTGTGAGAAG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCTGACGCAAAGCTTGTaGTTTGTTCTAGCACATTGT +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATLTQSL*FVLAHC
Trigger: ACAATGTGCTAGAACAAATCACAAGCTTTGCGTCAG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTATGATAGGATGTTCCTaGCGCAAAGCTTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATMIGCS*RKACDL
Trigger: CAAATCACAAGCTTTGCGTCAGGAACATCCTATCAT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTTGAACAGGCACTACTaGAGAGGTCTCCAAATTTAC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVLNRHY*RGLQIY
Trigger: GTAAATTTGGAGACCTCTTCAGTAGTGCCTGTTCAA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGATCTTGCCCAGCATTaGGTAGTTGATGCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEDLAQH*VVDAAG
Trigger: GCCCGCAGCATCAACTACTCAATGCTGGGCAAGATC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGATTTTGGATTTTGTaGGGCAGTCCAGATATCATC +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGFWIL*GSPDII
Trigger: GATGATATCTGGACTGCCTCACAAAATCCAAAATCC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGGAGCTGGGTTCTTCTaGCCCTCAAACAAGTCCCAC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEGAGFF*PSNKSH
Trigger: GTGGGACTTGTTTGAGGGTCAGAAGAACCCAGCTCC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTCGTTGTATTCCCATTaGTTCATGGCTTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRISLYSH*FMACST
Trigger: GGTGGAGCAAGCCATGAAGCAATGGGAATACAACGA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACTTCTCCAGGAGTTTTaGCACAGCCATGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGELLQEF*HSHGPV
Trigger: CACAGGGCCATGGCTGTGGCAAAACTCCTGGAGAAG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGAGGGTACACATGTATaGGTCATGGGAGAAGACATC +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINREGTHV*VMGEDI
Trigger: GATGTCTTCTCCCATGACGCATACATGTGTACCCTC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGTTCTTTTAAGCAATaGTCTCCTACCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGSFKQ*SPTHSC
Trigger: ACAGGAATGGGTAGGAGAGCATTGCTTAAAAGAACC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTTCAGCACTCTTCCTTaGACAGAAGTTGGCAACCTG +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIFSTLP*TEVGNL
Trigger: CAGGTTGCCAACTTCTGTGCAAGGAAGAGTGCTGAA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGCTTCGTGCATCATCTaGCGCGCTTTTATGTCATCT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFASCII*RAFMSS
Trigger: AGATGACATAAAAGCGCGGCAGATGATGCACGAAGC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTAGTTGCAATGCTTCGTaGATCATCTGCCGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRISCNAS*IICRAF
Trigger: AAAAGCGCGGCAGATGATGCACGAAGCATTGCAACT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGTGGACTGTGGATGGTaGATCATTTGGGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIVDCGW*IIWEEI
Trigger: TATCTCCTCCCAAATGATGCACCATCCACAGTCCAC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTCTCCATGGAATTGCTaGAATCAGTTCGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATSPWNC*NQFGQN
Trigger: GTTTTGACCGAACTGATTCCAGCAATTCCATGGAGA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGATAAAGTGTCTCCATaGAATTGCTGGAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGDKVSP*NCWNQF
Trigger: GAACTGATTCCAGCAATTCCATGGAGACACTTTATC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTGGGCGCAACCTCTTaGTTATCTTTGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGLGATS*LSLFWF
Trigger: AAACCAAAACAAAGATAACCAAGAGGTTGCGCCCAA...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCAACCCCTGTCTCTGTaGTGCTCTTCTTATTTAGAA +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVQPLSL*CSSYLE
Trigger: TTCTAAATAAGAAGAGCACCACAGAGACAGGGGTTG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGTTGATGTTCAGTGCTaGCTCCATGAGATCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATVDVQC*LHEIKD
Trigger: ATCTTTGATCTCATGGAGCCAGCACTGAACATCAAC...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAACTTCCTGCCAGGCTaGAGGATTTTAGGAGCAGTT +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRNFLPG*RILGAV
Trigger: AACTGCTCCTAAAATCCTCCAGCCTGGCAGGAAGTT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGTCTGCAGACTGCTaGAATACCTCTATTGTTGCC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFRSADC*NTSIVA
Trigger: GGCAACAATAGAGGTATTCCAGCAGTCTGCAGACCT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATCCTTGCACAGAAGTTaGCAACCTGGCGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGESLHRS*QPGDEG
Trigger: CCCCTCATCGCCAGGTTGCCAACTTCTGTGCAAGGA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCAGTCTGTAGTCCACTaGGTGCTCCTCTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFQSVVH*VLLCTV
Trigger: CACGGTGCAGAGGAGCACCCAGTGGACTACAGACTG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGCTGTGGCTGGTTGCTaGAAAGCTGCTTCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEAVAGC*KAASGA
Trigger: AGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAACTCCTTGCTGTGGCTaGTTGCTGGAAAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKITPCCG*LLESCF
Trigger: GAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCCATTAGCACGGGGTTaGAATGTGCGGCCGGATAGG +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFPLARG*NVRPDR
Trigger: CCTATCCGGCCGCACATTCCAACCCCGTGCTAATGG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAAGAGTAAACACAAAATaGGCAGGCTGGAGTGAAATA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGRVNTK*AGWSEI
Trigger: TATTTCACTCCAGCCTGCCCATTTTGTGTTTACTCT...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAGGCACAAGTCATCTTaGTCAGCCACGTTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIRHKSS*SATLLE
Trigger: TTCGAGCAACGTGGCTGATCAAGATGACTTGTGCCT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGTTCGGTCAAAACAGTaGCGATCCAAAACTTCCAAC +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIVRSKQ*RSKTSN
Trigger: GTTGGAAGTTTTGGATCGTCACTGTTTTGACCGAAC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGCCGAGTTGAGGCAGTaGCTGACAAATCTCCTCGAG +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFAELRQ*LTNLLE
Trigger: CTCGAGGAGATTTGTCAGTCACTGCCTCAACTCGGC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCACATCATGGTCCTTTaGATAGTGTTCATCTGCATT +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVHIMVL*IVFICI
Trigger: AATGCAGATGAACACTATTCAAAGGACCATGATGTG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTATGATAGGATGTTCCTaGCGCAAAGCTTGTGATTTG +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRMIGCS*RKACDL
Trigger: CAAATCACAAGCTTTGCGTCAGGAACATCCTATCAT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTGGCCGCATTGTCACTaGGGATCTTGCCCAGCATTG +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFWPHCH*GSCPAL
Trigger: CAATGCTGGGCAAGATCCTCAGTGACAATGCGGCCA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCCATACATACATTCATaGGTGTATTGCAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATPYIHS*VYCRQS
Trigger: GCTTTGTCTGCAATACACTCATGAATGTATGTATGG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTTAAACCCCCACACGTaGTTTGAAGAACAACAAAGA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLNPHT*FEEQQR
Trigger: TCTTTGTTGTTCTTCAAATCACGTGTGGGGGTTTAA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGGAGCTCGGAAGAGATaGAGCAAGAGTCGGCATGTC +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFGARKR*SKSRHV
Trigger: GACATGCCGACTCTTGCTTCATCTCTTCCGAGCTCC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTCTGTGCTTGCATATTTaGAAGCACAGGGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRLCLHI*KHRVQY
Trigger: ATATTGGACCCTGTGCTTTCAAATATGCAAGCACAG...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGCAATACTGTTTGGGTTaGAGAGGCTCATGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRQYCLG*RGSCQN
Trigger: ATTCTGGCATGAGCCTCTTCAACCCAAACAGTATTG...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTCATGTCAACAGTTCCTaGAGTAATGATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRHVNSS*SNDLKE
Trigger: CTCCTTCAGATCATTACTTCAGGAACTGTTGACATG...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTATATTCATCAACTCTTaGGCTAGATTTCGTCTTGCG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATIFINS*ARFRLA
Trigger: CGCAAGACGAAATCTAGCTCAAGAGTTGATGAATAT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGTTTCTGTCAAGATCTaGCATGCCTTTCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVVSVKI*HAFQIS
Trigger: ACTGATTTGAAAGGCATGTCAGATCTTGACAGAAAC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCACAGCAAAGTAAGCTaGCATGTATTTGAGGTCATT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFHSKVS*HVFEVI
Trigger: AATGACCTCAAATACATGTCAGCTTACTTTGCTGTG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTTCTCAGCCTAAAATGTaGCCTGGTTGCAACTTATGT +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRSQPKM*PGCNLC
Trigger: ACATAAGTTGCAACCAGGTCACATTTTAGGCTGAGA...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCACATGGGAGATGCCTaGCCACTCCCTTCTCTCAAC +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFHMGDA*PLPSLN
Trigger: GTTGAGAGAAGGGAGTGGTCAGGCATCTCCCATGTG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAATCCTTGCCCGAACCTaGAGCATTAGTGGTAGCAAG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIILART*SISGSK
Trigger: CTTGCTACCACTAATGCTGCAGGTTCGGGCAAGGAT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTCCGTTGATGTTCAGTaGTGGCTCCATGAGATCAAA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRISVDVQ*WLHEIK
Trigger: TTTGATCTCATGGAGCCAGCACTGAACATCAACGGA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGGAAAAACACTGTCGTaGTATCAGAATAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGGKTLS*YQNSNE
Trigger: TTCATTGCTATTCTGATAGCACGACAGTGTTTTTCC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGTTAATGTGCTGTCTTTaGAGATTGTCCCCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRLMCCL*RLSPSV
Trigger: TACCGAGGGGGACAATCTGCAAAGACAGCACATTAA...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACCAACCATACACCCCTaGGTTCGGAGGAACTTAGGA +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEPTIHP*VRRNLG
Trigger: TCCTAAGTTCCTCCGAACGCAGGGGTGTATGGTTGG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTAAATTTAGGCGGAGTTaGAATGCTTCGTGCATCATC +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRKFRRS*NASCII
Trigger: GATGATGCACGAAGCATTGCAACTCCGCCTAAATTT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGCACTCGGTATATGTTaGTCTGTGGATATTCATCAA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFALGIC*SVDIHQ
Trigger: TTGATGAATATCCACAGAGCAACATATACCGAGTGC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACTGCTGCGATGTGATTaGATGAAGAGAAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGELLRCD*MKRRRL
Trigger: CAGCCGCCTTCTCTTCATGCAATCACATCGCAGCAG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGGGAGTAGGCCTGCCTaGATGATTCACATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFGSRPA*MIHICK
Trigger: TTTACAAATGTGAATCATGCAGGCAGGCCTACTCCC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTACCATCACAGGTGAATaGAGAATAAACAGGCCATGT +
Preference number: 4 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRTITGE*RINRPC
Trigger: ACATGGCCTGTTTATTCTGCATTCACCTGTGATGGT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGTTGGACGATTCCACTaGAGTTCTTTCAGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFVGRFH*SSFRPL
Trigger: TAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAAC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGTTGGACGATTCCACTaGAGTTCTTTCAGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRVGRFH*SSFRPL
Trigger: TAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAAC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGAAAAGTCAGAAATCTTaGCCAACTGCTCTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVKSQKS*PTALED
Trigger: ATCTTCGAGAGCAGTTGGCCAAGATTTCTGACTTTT...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTAAAAGTCAGAAATCTTaGCCAACTGCTCTCGAAGAT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFKSQKS*PTALED
Trigger: ATCTTCGAGAGCAGTTGGCCAAGATTTCTGACTTTT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCTTAACAGCACATTCTaGAAAACAGGCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATLNSTF*KTGKLD
Trigger: ATCCAGTTTGCCTGTTTTCCAGAATGTGCTGTTAAG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTAATTGGCAGTTTCTATaGAAATGCTTTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATNWQFL*KCFSHR
Trigger: CCTGTGGGAAAAGCATTTCCATAGAAACTGCCAATT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTAATTGGCAGTTTCTATaGAAATGCTTTTCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFNWQFL*KCFSHR
Trigger: CCTGTGGGAAAAGCATTTCCATAGAAACTGCCAATT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTGTTTGATCATTAGCTaGAGTTCTAACCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVCLIIS*SSNQDC
Trigger: GCAATCCTGGTTAGAACTCCAGCTAATGATCAAACA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATGGTTCCTGAGAAACTaGAGATGTGGGCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIWFLRN*RCGLFL
Trigger: GAGGAAGAGCCCACATCTCCAGTTTCTCAGGAACCA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATGTAACCCCACAAGGTaGACTGTGGATGGTGCATCA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKICNPTR*TVDGAS
Trigger: TGATGCACCATCCACAGTCCACCTTGTGGGGTTACA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATTGTTTGGTGTTGGTTaGGACAAAGGAGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILFGVG*DKGACR
Trigger: CCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGCTGCAAGCCTTGCCTaGGAAACTGTTGGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLAASLA*ETVGKA
Trigger: GGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGAACTTGCGGCTGTCTaGGTCTCATGGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLELAAV*VSWDPE
Trigger: CTCAGGATCCCATGAGACCCAGACAGCCGCAAGTTC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGGAAACAAGGGCTGCTaGGGCTGCATTGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLGNKGC*GCIAWR
Trigger: TCTCCAAGCAATGCAGCCCCAGCAGCCCTTGTTTCC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGGATGGGAAAATGCTTaGGAGGGTCTAGGTCTATTA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIGWENA*EGLGLL
Trigger: TAATAGACCTAGACCCTCCCAAGCATTTTCCCATCC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACCAGTGAAGGCTGGCTaGTTATTGAAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIPVKAG*LLKPCF
Trigger: AAAGCAAGGCTTCAATAATCAGCCAGCCTTCACTGG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTACAATATTTCTGGCTaGGCCATGTTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIYNISG*AMFISS
Trigger: ACTGGAGATGAACATGGCTCAGCCAGAAATATTGTA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTTCGGATCAGGAGCCTaGCGTTTCTTAATTTTAGCT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFFGSGA*RFLILA
Trigger: AGCTAAAATTAAGAAACGTCAGGCTCCTGATCCGAA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCATCATCCATTGGTCTaGTCTTTTCTAAAACATCCA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFHHPLV*SFLKHP
Trigger: TGGATGTTTTAGAAAAGATCAGACCAATGGATGATG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGTTACATTCATGACTTaGAGATTCATCCAGAGGTAT +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFVTFMT*RFIQRY
Trigger: ATACCTCTGGATGAATCTTCAAGTCATGAATGTAAC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGGTTTGCTTTACTTTTaGACAGGCACTACTGAAGAG +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFGLLYF*TGTTEE
Trigger: CTCTTCAGTAGTGCCTGTTCAAAAGTAAAGCAAACC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGTGTCTATCACAAGATaGTCTTATTCCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFVSITR*SYSRER
Trigger: CCTTTCCCTGGAATAAGATCATCTTGTGATAGACAC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGGATTTTGGATTTTGTaGGGCAGTCCAGATATCATC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFGFWIL*GSPDII
Trigger: GATGATATCTGGACTGCCTCACAAAATCCAAAATCC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACCTACCCATTCCTGTTaGCAGATAGTCCTCAGTACA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIPTHSC*QIVLST
Trigger: TGTACTGAGGACTATCTGTCAACAGGAATGGGTAGG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCCTTCAAGCACTGTTTaGTCATTAGCTGGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFPSSTV*SLAGVL
Trigger: TAGAACTCCAGCTAATGATCAAACAGTGCTTGAAGG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCATGTCAACAGTTCCTaGAGTAATGATCTGAAGGAG +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFHVNSS*SNDLKE
Trigger: CTCCTTCAGATCATTACTTCAGGAACTGTTGACATG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTAGGCTAACGTTCCATTaGTTAAAACACCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIRLTFH*LKHPAC
Trigger: ACATGCTGGGTGTTTTAATCAATGGAACGTTAGCCT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAGGCTAACGTTCCATTaGTTAAAACACCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRRLTFH*LKHPAC
Trigger: ACATGCTGGGTGTTTTAATCAATGGAACGTTAGCCT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGTAAGAGATTGGTTCTaGAGGAAAAAGCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEVRDWF*RKKPGC
Trigger: GCAGCCCGGCTTTTTCCTTCAGAACCAATCTCTTAC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATGCGATGTGATTGCATaGAGAGAAGGCGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLCDVIA*REGGCI
Trigger: GATGCAGCCGCCTTCTCTTCATGCAATCACATCGCA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAACTGCTGCTGCGATGTaGTTGCATGAAGAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLTAAAM*LHEEKA
Trigger: CGCCTTCTCTTCATGCAATCACATCGCAGCAGCAGT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGCAGATTCAGAAGTGTaGAGGATGCCCATACGGAGT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEADSEV*RMPIRS
Trigger: ACTCCGTATGGGCATCCTTCACACTTCTGAATCTGC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATATCATCATGTGGGGTaGGTGGGCAGCAAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLYHHVG*VGSKEV
Trigger: AACCTCCTTGCTGCCCACTCACCCCACATGATGATA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGTCAAACTTTGCAATaGGTAACTCACCCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFSQTLQ*VTHPGR
Trigger: TCTTCCTGGGTGAGTTACTCATTGCAAAGTTTGACT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTATTGATAGGTATAGCTaGCTCCATTTGATTTCAAGG +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATIDRYS*LHLISR
Trigger: CCTTGAAATCAAATGGAGTCAGCTATACCTATCAAT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTAAACCAACTATGAATTaGACTCTGGGATCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIKPTMN*TLGSSS
Trigger: ACTGCTCGATCCCAGAGTGCAATTCATAGTTGGTTT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAAACCAACTATGAATTaGACTCTGGGATCGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRKPTMN*TLGSSS
Trigger: ACTGCTCGATCCCAGAGTGCAATTCATAGTTGGTTT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACTTGATCAGCCACGTTaGTCGAACCATTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGELDQPR*SNHWHR
Trigger: TCTGTGCCAATGGTTCGAGCAACGTGGCTGATCAAG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCATTGCTTCATGGCTTaGTCCACCTCTGGTGGCACA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFHCFMA*STSGGT
Trigger: TGTGCCACCAGAGGTGGAGCAAGCCATGAAGCAATG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATCGTTGTATTCCCATTaGTTCATGGCTTGCTCCACC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKISLYSH*FMACST
Trigger: GGTGGAGCAAGCCATGAAGCAATGGGAATACAACGA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGAGGGTACACATGTATaGGTCATGGGAGAAGACATC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIEGTHV*VMGEDI
Trigger: GATGTCTTCTCCCATGACGCATACATGTGTACCCTC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGAAGAAGAACCCAAGTaGTGTCCCTTCTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEEEEPK*CPFSSS
Trigger: AGAGCTGGAGAAGGGACAGCACTTGGGTTCTTCTTC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGCTTCGTGCATCATCTaGCGCGCTTTTATGTCATCT +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIASCII*RAFMSS
Trigger: AGATGACATAAAAGCGCGGCAGATGATGCACGAAGC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTACTGCTGCGATGTGATTaGATGAAGAGAAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLLLRCD*MKRRRL
Trigger: CAGCCGCCTTCTCTTCATGCAATCACATCGCAGCAG...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCAGAGAGTGACAGTCTaGAACATACAACTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFQRVTV*NIQLSP
Trigger: TGGACTTAGTTGTATGTTGCAGACTGTCACTCTCTG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTGCTGCTGCGATGTCTaGTGCAAAGGCATCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFCCCDV*CKGICV
Trigger: GACACAGATGCCTTTGCAGCAGACATCGCAGCAGCA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTTCTTTCCCGTGTCCTaGAAAGTGTTAAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFFFPVS*KVLSFS
Trigger: ACTGAAGCTTAACACTTTCCAGGACACGGGAAAGAA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTCTCCATGGAATTGCTaGAATCAGTTCGGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFSPWNC*NQFGQN
Trigger: GTTTTGACCGAACTGATTCCAGCAATTCCATGGAGA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACCACAGCTTCATCGTTaGGCGCAACCTCTTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEPQLHR*AQPLGY
Trigger: ATAACCAAGAGGTTGCGCCCAACGATGAAGCTGTGG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGGGAGAAGACATCATaGCGGATGAACTCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEWEKTS*RMNSQK
Trigger: CTTCTGCGAGTTCATCCGCCATGATGTCTTCTCCCA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCACAGTCTCCAGTGTTaGAAATGTCTCCTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFHSLQC*KCLLFV
Trigger: AACAAACAGGAGACATTTCCAACACTGGAGACTGTG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGTTGATGTTCAGTGCTaGCTCCATGAGATCAAAGAT +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIVDVQC*LHEIKD
Trigger: ATCTTTGATCTCATGGAGCCAGCACTGAACATCAAC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGTAGCTAATGAATCATaGAATGAAAGGTCACTCACA +
Preference number: 4 (lower is better)
Translates to: LETMSSVSTGISSQLLDFVANES*NERSLT
Trigger: TGTGAGTGACCTTTCATTCCATGATTCATTAGCTAC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAAAGGTGGACTGTGGATaGTGCATCATTTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEKVDCG*CIIWEE
Trigger: CTCCTCCCAAATGATGCACCATCCACAGTCCACCTT...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATCCAGCAAGAGAGGATaGAGAAATAGACTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKISSKRG*RNRLLL
Trigger: GAGAAGGAGTCTATTTCTTCATCCTCTCTTGCTGGA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGGTTTACGACATGCTTaGCCACACCACACAACCCTT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFGLRHA*PHHTTL
Trigger: AAGGGTTGTGTGGTGTGGTCAAGCATGTCGTAAACC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGCAAACCTCTCATGGTaGAGTCATCATTCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIANLSW*SHHSLK
Trigger: CTTTAAAGAATGATGACTTCACCATGAGAGGTTTGC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGTAGGCCTGCCTGCATaGTTCACATTTGTAAACCTA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIVGLPA*FTFVNL
Trigger: TAGGTTTACAAATGTGAATCATGCAGGCAGGCCTAC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTGTTTCAGCACCTTTTaGCCACAACAAAAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRICFSTF*PQQKQR
Trigger: TCTTTGCTTTTGTTGTGGTCAAAAGGTGCTGAAACA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAACTAATAGTCACCCCTaGTGTGGATTCTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKITNSHP*CGFLAL
Trigger: AAGTGCCAAGAATCCACAGCAGGGGTGACTATTAGT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGAATACGCTTAATGTaGTGTCTTTGCAGATTGTCC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFRIRLM*CLCRLS
Trigger: GGACAATCTGCAAAGACAGCACATTAAGCGTATTCT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTACTTCATAAATCCTTaGCCGAACCTGCTGATTGAA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFYFINP*PNLLIE
Trigger: TTCAATCAGCAGGTTCGGGCAAGGATTTATGAAGTA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAATTCCCATTGCTTCATaGCTTGCTCCACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLIPIAS*LAPPLV
Trigger: CACCAGAGGTGGAGCAAGCCATGAAGCAATGGGAAT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTTGGGCGCAACCTCTTaGTTATCTTTGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFLGATS*LSLFWF
Trigger: AAACCAAAACAAAGATAACCAAGAGGTTGCGCCCAA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCTTAACAGCACATTCTaGAAAACAGGCAAACTGGAT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFLNSTF*KTGKLD
Trigger: ATCCAGTTTGCCTGTTTTCCAGAATGTGCTGTTAAG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCACATGTATGCGTCATaGGAGAAGACATCATGGCGG +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFHMYAS*EKTSWR
Trigger: CCGCCATGATGTCTTCTCCCATGACGCATACATGTG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCGTATTCTCTTAAATTaGCAGTTTCTATGGAAATGC +
Preference number: 4 (lower is better)
Translates to: SGSRPACMIHICKPTLKVRILLN*QFLWKC
Trigger: GCATTTCCATAGAAACTGCCAATTTAAGAGAATACG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTGTTTGATCATTAGCTaGAGTTCTAACCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFCLIIS*SSNQDC
Trigger: GCAATCCTGGTTAGAACTCCAGCTAATGATCAAACA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAACTTCCAATACTGTTTaGGTTGAAGAGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKITSNTV*VEEAHA
Trigger: GGCATGAGCCTCTTCAACCCAAACAGTATTGGAAGT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGCTTTTATGTCATCTTaGTATCGTTCTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFAFMSS*YRSSLQ
Trigger: CTGGAGAGAAGAACGATACCAAGATGACATAAAAGC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATTGACAGAGCTTGTTTaGTGTTGGTTGGGACAAAGG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILTELV*CWLGQR
Trigger: CCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAAAAACCAGAGCCTTCTaGACTTTGGGGCCAGATTCT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEKTRAF*TLGPDS
Trigger: AGAATCTGGCCCCAAAGTCCAGAAGGCTCTGGTTTT...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTAAACAAGAGAGTCTATaGGCTTCTTATATCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATKQESL*ASYIQE
Trigger: TTCTTGGATATAAGAAGCCCATAGACTCTCTTGTTT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCCAGTGAAGGCTGGCTaGTTATTGAAGCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFPVKAG*LLKPCF
Trigger: AAAGCAAGGCTTCAATAATCAGCCAGCCTTCACTGG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATTCGGATCAGGAGCCTaGCGTTTCTTAATTTTAGCT +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIFGSGA*RFLILA
Trigger: AGCTAAAATTAAGAAACGTCAGGCTCCTGATCCGAA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTCATCATCCATTGGTCTaGTCTTTTCTAAAACATCCA +
Preference number: 4 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIHHPLV*SFLKHP
Trigger: TGGATGTTTTAGAAAAGATCAGACCAATGGATGATG...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACTTCTCACAATTAACTaGCATTCTTCTGCCCAACGA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILLTIN*HSSAQR
Trigger: TCGTTGGGCAGAAGAATGTCAGTTAATTGTGAGAAG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGTAATCTTCTTCAGCTaGTGCCTTGCTTCATCACGC +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFVIFFS*CLASSR
Trigger: GCGTGATGAAGCAAGGCATCAGCTGAAGAAGATTAC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTAGTCAATTAGTCCGTTaGTGTTCAGTGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFSQLVR*CSVLAP
Trigger: TGGAGCCAGCACTGAACATCAACGGACTAATTGACT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCCCCCACACGTGATTTaGAGAACAACAAAGAGCCTT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFPPHVI*RTTKSL
Trigger: AAGGCTCTTTGTTGTTCTTCAAATCACGTGTGGGGG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGTGTCTATCACAAGATaGTCTTATTCCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIVSITR*SYSRER
Trigger: CCTTTCCCTGGAATAAGATCATCTTGTGATAGACAC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACTGTGCTTGCATATTTaGAAGCACAGGGTCCAATAT +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILCLHI*KHRVQY
Trigger: ATATTGGACCCTGTGCTTTCAAATATGCAAGCACAG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATTGGGCAACAGAGAGTaGCAGTCTGCAACATACAAC +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLLGNRE*QSATYN
Trigger: GTTGTATGTTGCAGACTGTCACTCTCTGTTGCCCAA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCCACCGAACTTCCACTaGACGGCCTCTTTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFPPNFH*TASLFY
Trigger: ATAAAACAAAGAGGCCGTGCAGTGGAAGTTCGGTGG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGTGTCTCCATGGAATTaGTGGAATCAGTTCGGTCAA +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEVSPWN*WNQFGQ
Trigger: TTGACCGAACTGATTCCAGCAATTCCATGGAGACAC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCTTCATCACGCTCTTTaGCGACTCCATAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFLHHAL*RLHREG
Trigger: TCCTTCTCTATGGAGTCGGCAAAGAGCGTGATGAAG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTCGCAAGTTCGAATTTaGAGGCATCACGTTATTATA +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFSQVRI*RHHVII
Trigger: TATAATAACGTGATGCCTGCAAATTCGAACTTGCGA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTAGTTCTAACCAGGATTaGCTCAGTGTCCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFSSNQD*LSVHCS
Trigger: TGAGCAGTGGACACTGAGGCAATCCTGGTTAGAACT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACATGTCTTCTCCTCTTaGAGATTCAGAAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIHVFSS*RFRSVK
Trigger: CTTCACACTTCTGAATCTGCAAGAGGAGAAGACATG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCTGAGCAGGAATCGTTaGTCTATAAGCATTTCATTT +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFLSRNR*SISISF
Trigger: AAATGAAATGCTTATAGAGCAACGATTCCTGCTCAG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAAAATCACATGGGAGATaGCTGACCACTCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLKSHGR*LTTPFS
Trigger: AGAGAAGGGAGTGGTCAGGCATCTCCCATGTGATTT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTTTAGCATTAACTTGTaGTTTCTTCTTTCCCGTGTC +
Preference number: 4 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFFSINL*FLLSRV
Trigger: GACACGGGAAAGAAGAAACCACAAGTTAATGCTAAA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGGAAAACAGGCAAACTaGATCCAGCAAGAGAGGATG +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLGKQAN*IQQERM
Trigger: CATCCTCTCTTGCTGGATCCAGTTTGCCTGTTTTCC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTGCCCAACGAAGTGTTaGCATTCTCACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFCPTKC*HSHRIL
Trigger: GAGAATCCTGTGAGAATGCCAACACTTCGTTGGGCA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTAGGTCTGCAGACTGCTaGAATACCTCTATTGTTGCC +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFRSADC*NTSIVA
Trigger: GGCAACAATAGAGGTATTCCAGCAGTCTGCAGACCT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATTGACAGAGCTTGTTTaGTGTTGGTTGGGACAAAGG +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGELTELV*CWLGQR
Trigger: CCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATCAGAAAACCAACTATaGATTGCACTCTGGGATCGA +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGESENQL*IALWDR
Trigger: TCGATCCCAGAGTGCAATTCATAGTTGGTTTTCTGA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTAATCTCCTCGAGATATaGGGGTACACATGTATGCGT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFNLLEI*GYTCMR
Trigger: ACGCATACATGTGTACCCTCATATCTCGAGGAGATT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACACATCATGGTCCTTTaGATAGTGTTCATCTGCATT +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIHIMVL*IVFICI
Trigger: AATGCAGATGAACACTATTCAAAGGACCATGATGTG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACGCTGGTTACATTCATaGCTTGAAGATTCATCCAGA +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGERWLHS*LEDSSR
Trigger: TCTGGATGAATCTTCAAGTCATGAATGTAACCAGCG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAAACACCTGGGCTGTCTaGTCAGGATTCAAGATTAGA +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLNTWAV*SGFKIR
Trigger: TCTAATCTTGAATCCTGATCAGACAGCCCAGGTGTT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATTGAACAGGCACTACTaGAGAGGTCTCCAAATTTAC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGELNRHY*RGLQIY
Trigger: GTAAATTTGGAGACCTCTTCAGTAGTGCCTGTTCAA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACCATACATACATTCATaGGTGTATTGCAGACAAAGC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIPYIHS*VYCRQS
Trigger: GCTTTGTCTGCAATACACTCATGAATGTATGTATGG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGCAAACCTCTCATGGTaGAGTCATCATTCTTTAAAG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIANLSW*SHHSLK
Trigger: CTTTAAAGAATGATGACTTCACCATGAGAGGTTTGC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTACAATACTGTTTGGGTTaGAGAGGCTCATGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLQYCLG*RGSCQN
Trigger: ATTCTGGCATGAGCCTCTTCAACCCAAACAGTATTG...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATGTTTCAGCACCTTTTaGCCACAACAAAAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKICFSTF*PQQKQR
Trigger: TCTTTGCTTTTGTTGTGGTCAAAAGGTGCTGAAACA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTACTAATAGTCACCCCTaGTGTGGATTCTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFTNSHP*CGFLAL
Trigger: AAGTGCCAAGAATCCACAGCAGGGGTGACTATTAGT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAAACTTCCAACGTGTaGAAAACCCGACTAATAGTC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIKTSNV*KTRLIV
Trigger: GACTATTAGTCGGGTTTTGCACACGTTGGAAGTTTT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACATAGAGAAGGATTGTaGGCTGGTTACATTCATGAC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEHREGL*AGYIHD
Trigger: GTCATGAATGTAACCAGCGCACAATCCTTCTCTATG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTTAATGTGCTGTCTTTaGAGATTGTCCCCCTCGGTA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFLMCCL*RLSPSV
Trigger: TACCGAGGGGGACAATCTGCAAAGACAGCACATTAA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAGAATACGCTTAATGTaGTGTCTTTGCAGATTGTCC +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIRIRLM*CLCRLS
Trigger: GGACAATCTGCAAAGACAGCACATTAAGCGTATTCT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATTTAGGTCTGCAGACTaGTGGAATACCTCTATTGTT +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIFRSAD*WNTSIV
Trigger: AACAATAGAGGTATTCCAGCAGTCTGCAGACCTAAA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATTCCATTCTGTCTCGTaGTACTTGTATCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEFHSVS*YLYQHF
Trigger: GAAGTGCTGATACAAGTAGCACGAGACAGAATGGAA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAAAATTTAGGCGGAGTTaGAATGCTTCGTGCATCATC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEKFRRS*NASCII
Trigger: GATGATGCACGAAGCATTGCAACTCCGCCTAAATTT...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGTATTTGAGGTCATTTaGATGAGTCAAACTTTGCAA +
Preference number: 4 (lower is better)
Translates to: AMQINVRFTITGECRINRVFEVI*MSQTLQ
Trigger: TTGCAAAGTTTGACTCATGCAAATGACCTCAAATAC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTATCTCCAGTGAAGGCTaGCTGATTATTGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFISSEG*LIIEAL
Trigger: CAAGGCTTCAATAATCAGCCAGCCTTCACTGGAGAT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTATCCATCATGAAGTCTaGATCCCATCGCAAGTTCGA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFIHHEV*IPSQVR
Trigger: TCGAACTTGCGATGGGATCCAGACTTCATGATGGAT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGCTTTTATGTCATCTTaGTATCGTTCTTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIAFMSS*YRSSLQ
Trigger: CTGGAGAGAAGAACGATACCAAGATGACATAAAAGC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACTGGCAATAAATAGTTaGACGATTCCACTGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGELAINS*TIPLQF
Trigger: GAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGATACTCGAGTTGTTTaGTCCTATCATCATGTGGGG +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLDTRVV*SYHHVG
Trigger: CCCCACATGATGATAGGACCAAACAACTCGAGTATC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAAGGCTGGCTGATTATTaGAGCCTTGCTTTACATTCA +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLRLADY*SLALHS
Trigger: TGAATGTAAAGCAAGGCTTCAATAATCAGCCAGCCT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTACAATATTTCTGGCTaGGCCATGTTCATCTCCAGT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFYNISG*AMFISS
Trigger: ACTGGAGATGAACATGGCTCAGCCAGAAATATTGTA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCTGACGCAAAGCTTGTaGTTTGTTCTAGCACATTGT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFLTQSL*FVLAHC
Trigger: ACAATGTGCTAGAACAAATCACAAGCTTTGCGTCAG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTACTCCAAATTTACTTCTaGGGTGGCTACATGACACAT +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLLQIYF*GGYMTH
Trigger: ATGTGTCATGTAGCCACCTCAGAAGTAAATTTGGAG...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGAGAGGAAGGGTTGTTaGCTCAAAAGAGACATACTT +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLERKGC*LKRDIL
Trigger: AAGTATGTCTCTTTTGAGTCAACAACCCTTCCTCTC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACCCCTGTCTCTGTGGTaGTCTTCTTATTTAGAATTT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEPLSLW*SSYLEF
Trigger: AAATTCTAAATAAGAAGAGCACCACAGAGACAGGGG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGGAAAAACACTGTCGTaGTATCAGAATAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIGKTLS*YQNSNE
Trigger: TTCATTGCTATTCTGATAGCACGACAGTGTTTTTCC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGGTTCTTTTAAGCAATaGTCTCCTACCCATTCCTGT +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLGSFKQ*SPTHSC
Trigger: ACAGGAATGGGTAGGAGAGCATTGCTTAAAAGAACC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGAATACCTCTATTGTTaGCTTTGCAATATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIEYLYC*LCNIVQ
Trigger: CTGGACAATATTGCAAAGGCAACAATAGAGGTATTC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATTTAGGTCTGCAGACTaGTGGAATACCTCTATTGTT +
Preference number: 4 (lower is better)
Translates to: TFQIRAMQINVRFTITGEFRSAD*WNTSIV
Trigger: AACAATAGAGGTATTCCAGCAGTCTGCAGACCTAAA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTACATGTCTTCTCCTCTTaGAGATTCAGAAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLHVFSS*RFRSVK
Trigger: CTTCACACTTCTGAATCTGCAAGAGGAGAAGACATG...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAACTTCTAATACCAGTTaGCTAGTGTCCACCTCCTAT +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLTSNTS*LVSTSY
Trigger: ATAGGAGGTGGACACTAGGCAACTGGTATTAGAAGT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAGTAGCTAATGAATCATaGAATGAAAGGTCACTCACA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIVANES*NERSLT
Trigger: TGTGAGTGACCTTTCATTCCATGATTCATTAGCTAC...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTTAAACCCCCACACGTaGTTTGAAGAACAACAAAGA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFLNPHT*FEEQQR
Trigger: TCTTTGTTGTTCTTCAAATCACGTGTGGGGGTTTAA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTATATTCATCAACTCTTaGGCTAGATTTCGTCTTGCG +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFIFINS*ARFRLA
Trigger: CGCAAGACGAAATCTAGCTCAAGAGTTGATGAATAT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGTTTCTGTCAAGATCTaGCATGCCTTTCAAATCAGT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFVSVKI*HAFQIS
Trigger: ACTGATTTGAAAGGCATGTCAGATCTTGACAGAAAC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTACAAATACACCTTTTATaGAAACCAGAGCCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLQIHLL*KPEPSG
Trigger: TCCAGAAGGCTCTGGTTTTCATAAAAGGTGTATTTG...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCATTCACATTTCGGTTaGTTTGCCAATGCAGTCATT +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFHSHFG*FANAVI
Trigger: AATGACTGCATTGGCAAATCAACCGAAATGTGAATG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATCCAAGAACTGTGATTaGTTGATAGGTATAGCTGAC +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLSKNCD*LIGIAD
Trigger: GTCAGCTATACCTATCAATCAATCACAGTTCTTGGA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR GCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAAAAACTTCCAACGTGTaGAAAACCCGACTAATAGTC +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLKTSNV*KTRLIV
Trigger: GACTATTAGTCGGGTTTTGCACACGTTGGAAGTTTT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAATTCATTGTTAGTGTaGATGTCAACAGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKINSLLV*MSTVPE
Trigger: TTCAGGAACTGTTGACATGCACACTAACAATGAATT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGATAAAGTGTCTCCATaGAATTGCTGGAATCAGTTC +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLDKVSP*NCWNQF
Trigger: GAACTGATTCCAGCAATTCCATGGAGACACTTTATC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR TCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGTTACATTCATGACTTaGAGATTCATCCAGAGGTAT +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLVTFMT*RFIQRY
Trigger: ATACCTCTGGATGAATCTTCAAGTCATGAATGTAAC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTTCAAATCAGTAGTTTaGTCCAGCACAGTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFFKSVV*SSTVWK
Trigger: TTTCCAAACTGTGCTGGACCAAACTACTGATTTGAA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTAATTCATTGTTAGTGTaGATGTCAACAGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFNSLLV*MSTVPE
Trigger: TTCAGGAACTGTTGACATGCACACTAACAATGAATT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR GCA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGCAATGACTGACAAATaGAACCCTATTAAGAAAAAG +
Preference number: 4 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLAMTDK*NPIKKK
Trigger: CTTTTTCTTAATAGGGTTGCATTTGTCAGTCATTGC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp CGGTATCTGCCTCGCCCGGACGAGCTCCGGGAACGCCGCGAAGTTTaGCACTGTCTGGGGGCGGCGAGCGACGCCGGCTCGCCGCCGGCG +
Preference number: 5 (lower is better)
Translates to: RYLPRPDELRERREV*HCLGAASDAGSPPA
Trigger: CGCCGGCGGCGAGCCGGCGTCGCTCGCCGCCCCCAGACAGTGGCAAACTTCGCGGCGTTCCCGGAGCTCGTCCGGGCGAGGCAGATACCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469768.1
CDS GCA 90 bp CAGCAGACACGCACTGATGGGGACAGCCTTCGGCGGGTACTCGGCTaGGCTCGAGCCCCGGGACGCACCGCTCCGGTGGCGGCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: QQTRTDGDSLRRVLG*ARAPGRTAPVAAAE
Trigger: CTCCGCCGCCGCCACCGGAGCGGTGCGTCCCGGGGCTCGAGCGCAGCCGAGTACCCGCCGAAGGCTGTCCCCATCAGTGCGTGTCTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309237.8
ENST00000422248.6
CDS TCA 90 bp ATAAAGCAGGTTGGATGCTGCCGCTGCCCGGCAGCAGACACGCACTaGTGGGGACAGCCTTCGGCGGGTACTCGGCTGCGCTCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: IKQVGCCRCPAADTH*WGQPSAGTRLRSSP
Trigger: GGGGCTCGAGCGCAGCCGAGTACCCGCCGAAGGCTGTCCCCATCAGTGCGTGTCTGCTGCCGGGCAGCGGCAGCATCCAACCTGCTTTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309237.8
ENST00000422248.6
CDS CCA 90 bp TGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTGCTGCTaGGTCTGCTGCAAGCCTTGCCTGGGAAACAAGGGCTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: CFWSCRTKAAVCCCC*VCCKPCLGNKGCWG
Trigger: GCCCCAGCAGCCCTTGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp TGGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTGCTGCTGGGTCTaGTGCAAGCCTTGCCTGGGAAACAAGGGCTGCTGGGGCTGCATT +
Preference number: 5 (lower is better)
Translates to: WSCRTKAAVCCCCWV*CKPCLGNKGCWGCI
Trigger: AATGCAGCCCCAGCAGCCCTTGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp TGGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTGCTGCTGGGTCTaGTGCAAGCCTTGCCTGGGAAACTGTTGGAAAGGCCGAGTCTGG +
Preference number: 5 (lower is better)
Translates to: WSCRTKAAVCCCCWV*CKPCLGNCWKGRVW
Trigger: CCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS GCA 90 bp GTCACTCCTTGCTGTGGCTGGTTGCTGGAAAGCTGCTTCTGGAGCTaGCGCACCAAGGCGGCCGTCTGCTGCTGCTGCTGGGTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VTPCCGWLLESCFWS*RTKAAVCCCCWVCC
Trigger: GCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 90 bp GAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTaGTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACAAGGGCTGC +
Preference number: 5 (lower is better)
Translates to: ESCFWSCRTKAAVCC*CWVCCKPCLGNKGC
Trigger: GCAGCCCTTGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp CTGGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTaGTGCTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACAAGGGC +
Preference number: 5 (lower is better)
Translates to: LESCFWSCRTKAAVC*CCWVCCKPCLGNKG
Trigger: GCCCTTGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CCA 90 bp AGGCGGCCGTCTGCTGCTGCTGCTGGGTCTGCTGCAAGCCTTGCCTaGGAAACAAGGGCTGCTGGGGCTGCATTGCTTGGAGACCAAGGG +
Preference number: 5 (lower is better)
Translates to: RRPSAAAAGSAASLA*ETRAAGAALLGDQG
Trigger: CCCTTGGTCTCCAAGCAATGCAGCCCCAGCAGCCCTTGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp CTGGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTaGTGCTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACTGTTGG +
Preference number: 5 (lower is better)
Translates to: LESCFWSCRTKAAVC*CCWVCCKPCLGNCW
Trigger: CCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS GCA 90 bp TGCCCATACGGAGTCACTCCTTGCTGTGGCTGGTTGCTGGAAAGCTaGTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CPYGVTPCCGWLLES*FWSCRTKAAVCCCC
Trigger: GCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp TGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTGCTGCTaGGTCTGCTGCAAGCCTTGCCTGGGAAACTGTTGGAAAGGCCGA +
Preference number: 5 (lower is better)
Translates to: CFWSCRTKAAVCCCC*VCCKPCLGNCWKGR
Trigger: TCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS GCA 90 bp ACCAAGGCGGCCGTCTGCTGCTGCTGCTGGGTCTGCTGCAAGCCTTaGCTGGGAAACTGTTGGAAAGGCCGAGTCTGGGCTTGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: TKAAVCCCCWVCCKP*LGNCWKGRVWACLR
Trigger: TCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS GCA 90 bp TTGCTGGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTaGTGCTGCTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACTGT +
Preference number: 5 (lower is better)
Translates to: LLESCFWSCRTKAAV*CCCWVCCKPCLGNC
Trigger: ACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS GCA 90 bp TTGCTGGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTaGTGCTGCTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACAAG +
Preference number: 5 (lower is better)
Translates to: LLESCFWSCRTKAAV*CCCWVCCKPCLGNK
Trigger: CTTGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp GAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTaGTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: ESCFWSCRTKAAVCC*CWVCCKPCLGNCWK
Trigger: TTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CCA 90 bp GTGAAGGATGCCCATACGGAGTCACTCCTTGCTGTGGCTGGTTGCTaGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCT +
Preference number: 5 (lower is better)
Translates to: VKDAHTESLLAVAGC*KAASGAAAPRRPSA
Trigger: AGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp GGAGGAGTCTCTGCTGCTGTCGAACTTGCGGCTGTCTGGGTCTCATaGGATCCTGAGGCAGGGGCACGGAGGGAAGGTTTGGATGTGCAG +
Preference number: 5 (lower is better)
Translates to: GGVSAAVELAAVWVS*DPEAGARREGLDVQ
Trigger: CTGCACATCCAAACCTTCCCTCCGTGCCCCTGCCTCAGGATCCCATGAGACCCAGACAGCCGCAAGTTCGACAGCAGCAGAGACTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CCA 90 bp GCTGCATCTGGAGGAGTCTCTGCTGCTGTCGAACTTGCGGCTGTCTaGGTCTCATGGGATCCTGAGGCAGGGGCACGGAGGGAAGGTTTG +
Preference number: 5 (lower is better)
Translates to: AASGGVSAAVELAAV*VSWDPEAGARREGL
Trigger: CAAACCTTCCCTCCGTGCCCCTGCCTCAGGATCCCATGAGACCCAGACAGCCGCAAGTTCGACAGCAGCAGAGACTCCTCCAGATGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS TCA 90 bp CCGCCGCAGCCTCCATCATTCGGGTTGGGATGGGGGACTTGGATTTaGTTTTATTTGTGCGGTATCTGCCTCGCCCGGACGAGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: PPQPPSFGLGWGTWI*FYLCGICLARTSSG
Trigger: CCCGGAGCTCGTCCGGGCGAGGCAGATACCGCACAAATAAAATCAAATCCAAGTCCCCCATCCCAACCCGAATGATGGAGGCTGCGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469768.1
CDS TCA 90 bp CTCTGCTGCTGTCGAACTTGCGGCTGTCTGGGTCTCATGGGATCCTaGGGCAGGGGCACGGAGGGAAGGTTTGGATGTGCAGAAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LCCCRTCGCLGLMGS*GRGTEGRFGCAEVS
Trigger: GCTGACTTCTGCACATCCAAACCTTCCCTCCGTGCCCCTGCCTCAGGATCCCATGAGACCCAGACAGCCGCAAGTTCGACAGCAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp AGTGTGAAGGATGCCCATACGGAGTCACTCCTTGCTGTGGCTGGTTaGTGGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: SVKDAHTESLLAVAG*WKAASGAAAPRRPS
Trigger: AGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 90 bp CGGCCGGATAGGCTCTGGAGTTATAGCTGGGAGACAGGACCACACTaGCAGCCTGCTGCTGCGATGTCTGCTGCAAAGGCATCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: RPDRLWSYSWETGPH*QPAAAMSAAKASVS
Trigger: GGACACAGATGCCTTTGCAGCAGACATCGCAGCAGCAGGCTGGCAGTGTGGTCCTGTCTCCCAGCTATAACTCCAGAGCCTATCCGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp TCTCATGGGATCCTGAGGCAGGGGCACGGAGGGAAGGTTTGGATGTaGAGAAGTCAGCACAGCATCAATTCCCCCGCCCACCAGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SHGILRQGHGGKVWM*RSQHSINSPAHQRA
Trigger: AGCCCTCTGGTGGGCGGGGGAATTGATGCTGTGCTGACTTCTGCACATCCAAACCTTCCCTCCGTGCCCCTGCCTCAGGATCCCATGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CCA 90 bp TGCTGCTGCTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACTGTTaGAAAGGCCGAGTCTGGGCTTGCCTGAGAAGTCGCTGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: CCCCWVCCKPCLGNC*KGRVWACLRSRCCC
Trigger: GCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CCA 90 bp CAGAAGTGTGAAGGATGCCCATACGGAGTCACTCCTTGCTGTGGCTaGTTGCTGGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCC +
Preference number: 5 (lower is better)
Translates to: QKCEGCPYGVTPCCG*LLESCFWSCRTKAA
Trigger: GGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCACACTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 90 bp TGGCTTGCTCCACCTCTGGTGGCACAGGGACAGGGCCATCGCCCGTaGTGGAGGCCATGTGGTAAAAGTCAGAAATCTTGGCCAACTGCT +
Preference number: 5 (lower is better)
Translates to: WLAPPLVAQGQGHRP*WRPCGKSQKSWPTA
Trigger: AGCAGTTGGCCAAGATTTCTGACTTTTACCACATGGCCTCCAGCACGGGCGATGGCCCTGTCCCTGTGCCACCAGAGGTGGAGCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CCA 90 bp CTTGCTCCACCTCTGGTGGCACAGGGACAGGGCCATCGCCCGTGCTaGAGGCCATGTGGTAAAAGTCAGAAATCTTGGCCAACTGCTCTC +
Preference number: 5 (lower is better)
Translates to: LAPPLVAQGQGHRPC*RPCGKSQKSWPTAL
Trigger: GAGAGCAGTTGGCCAAGATTTCTGACTTTTACCACATGGCCTCCAGCACGGGCGATGGCCCTGTCCCTGTGCCACCAGAGGTGGAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CCA 90 bp GTCTGCTGCAAGCCTTGCCTGGGAAACTGTTGGAAAGGCCGAGTCTaGGCTTGCCTGAGAAGTCGCTGTTGCTGCTGCTGCTGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: VCCKPCLGNCWKGRV*ACLRSRCCCCCCRS
Trigger: GCTTCTGCAGCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS TCA 90 bp CGGACTGTCCCAAACCAGGCCCAGGACAAAGGAGCTGGGTTCTTCTaGCCCTCAAACAAGTCCCACGGGGACACCTTCTGCTTCGTAGAG +
Preference number: 5 (lower is better)
Translates to: RTVPNQAQDKGAGFF*PSNKSHGDTFCFVE
Trigger: CTCTACGAAGCAGAAGGTGTCCCCGTGGGACTTGTTTGAGGGTCAGAAGAACCCAGCTCCTTTGTCCTGGGCCTGGTTTGGGACAGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp CGCCTGAGCGCCGCTGTAGCATGTTTGACAGAGCTTGTTTGGTGTTaGTTGGGACAAAGGAGCCTGCAGGGTCCAATCTGGAGCCACCTG +
Preference number: 5 (lower is better)
Translates to: RLSAAVACLTELVWC*LGQRSLQGPIWSHL
Trigger: CAGGTGGCTCCAGATTGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp CTGCTGGGGCTGGCCCACGAGGTTGTAACCCCACAAGGTGGACTGTaGATGGTGCATCATTTGGGAGGAGATAGGCGAGTAATTAGGAGG +
Preference number: 5 (lower is better)
Translates to: LLGLAHEVVTPQGGL*MVHHLGGDRRVIRR
Trigger: CCTCCTAATTACTCGCCTATCTCCTCCCAAATGATGCACCATCCACAGTCCACCTTGTGGGGTTACAACCTCGTGGGCCAGCCCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp TCATGGCGCCTGAGCGCCGCTGTAGCATGTTTGACAGAGCTTGTTTaGTGTTGGTTGGGACAAAGGAGCCTGCAGGGTCCAATCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SWRLSAAVACLTELV*CWLGQRSLQGPIWS
Trigger: GCTCCAGATTGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAGGCGCCATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 90 bp TGCAGAAGCTTCATCTGTATCAACTGCTGCTGCGATGTGATTGCATaGAGAGAAGGCGGCTGCATCATGGCGCCTGAGCGCCGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: CRSFICINCCCDVIA*REGGCIMAPERRCS
Trigger: GCTACAGCGGCGCTCAGGCGCCATGATGCAGCCGCCTTCTCTTCATGCAATCACATCGCAGCAGCAGTTGATACAGATGAAGCTTCTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS GCA 90 bp TCCGCATCCCCACAAGCTGCTGCTAGAAGAGAGGGAAGTGCGACATaGTGCACGACGTCCTCCAGGGAAAAACACTGTCGTGCTATCAGA +
Preference number: 5 (lower is better)
Translates to: SASPQAAARREGSAT*CTTSSREKHCRAIR
Trigger: TCTGATAGCACGACAGTGTTTTTCCCTGGAGGACGTCGTGCAGCATGTCGCACTTCCCTCTCTTCTAGCAGCAGCTTGTGGGGATGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 90 bp TTGCAGATTCAGAAGTGTGAAGGATGCCCATACGGAGTCACTCCTTaGTGTGGCTGGTTGCTGGAAAGCTGCTTCTGGAGCTGCCGCACC +
Preference number: 5 (lower is better)
Translates to: LQIQKCEGCPYGVTP*CGWLLESCFWSCRT
Trigger: GGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCACACTTCTGAATCTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp TGTTTGGTCCTATCATCATGTGGGGTGAGTGGGCAGCAAGGAGGTTaGGGCTATCGCTCAGCAGCAAGGAAAGACGCCGGGCACAAAAGT +
Preference number: 5 (lower is better)
Translates to: CLVLSSCGVSGQQGG*GYRSAARKDAGHKS
Trigger: ACTTTTGTGCCCGGCGTCTTTCCTTGCTGCTGAGCGATAGCCCCAACCTCCTTGCTGCCCACTCACCCCACATGATGATAGGACCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS-3UTR CAA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATCTTCTCCAGGAGTTTaGCCACAGCCATGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: PVAGSGQSYALISSTSRPSSPGV*PQPWPC
Trigger: ACAGGGCCATGGCTGTGGCAAAACTCCTGGAGAAGA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCCTTGCTGTGGCTGGTaGCTGGAAAGCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFPCCGW*LESCFW
Trigger: CCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGCCCCGGCTGGCCCTGTaGGAAAGGCCGAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRPRLAL*ERPSLG
Trigger: GCCCAGACTCGGCCTTTCCAACAGGGCCAGCCGGGG...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGAGGGGAGGGCCGTGCTaGCGCAGCAAAGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVRGGPC*RSKESS
Trigger: GCTGCTCTCTTTGCTGCGCAAGCACGGCCCTCCCCT...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCTGGGGCTGCATTGCTaGGAGACCAAGGGTCTGACT +
Preference number: 5 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFLGLHC*ETKGLT
Trigger: AGTCAGACCCTTGGTCTCCAAGCAATGCAGCCCCAG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp GCATCCCCACAAGCTGCTGCTAGAAGAGAGGGAAGTGCGACATGCTaGACGACGTCCTCCAGGGAAAAACACTGTCGTGCTATCAGAATA +
Preference number: 5 (lower is better)
Translates to: ASPQAAARREGSATC*TTSSREKHCRAIRI
Trigger: TATTCTGATAGCACGACAGTGTTTTTCCCTGGAGGACGTCGTGCAGCATGTCGCACTTCCCTCTCTTCTAGCAGCAGCTTGTGGGGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 90 bp AAAGGCCGAGTCTGGGCTTGCCTGAGAAGTCGCTGTTGCTGCTGCTaGTGCAGAAGCTTCATCTGTATCAACTGCTGCTGCGATGTGATT +
Preference number: 5 (lower is better)
Translates to: KGRVWACLRSRCCCC*CRSFICINCCCDVI
Trigger: AATCACATCGCAGCAGCAGTTGATACAGATGAAGCTTCTGCAGCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGCCATGGCCCTGTGCTaGCCAGACCGTTTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVAMALC*PDRLQL
Trigger: GAGCTGCAAACGGTCTGGCAAGCACAGGGCCATGGC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGGTCTGCTGCAAGCCTaGCCTGGGAAACAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGGLLQA*PGKQGL
Trigger: CAGCCCTTGTTTCCCAGGCAAGGCTTGCAGCAGACC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACCATTGCTTCATGGCTaGCTCCACCTCTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGPLLHG*LHLWWH
Trigger: GTGCCACCAGAGGTGGAGCAAGCCATGAAGCAATGG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACCTGAGAAGTCGCTGTaGCTGCTGCTGCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGPEKSL*LLLLQK
Trigger: CTTCTGCAGCAGCAGCAGCAACAGCGACTTCTCAGG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTGCTTGCCAGACCGTTaGCAGCTCACGGCCCATTCA +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFCLPDR*QLTAHS
Trigger: TGAATGGGCCGTGAGCTGCAAACGGTCTGGCAAGCA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTTGCCTGGGAAACTGTaGGAAAGGCCGAGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLPGKL*ERPSLG
Trigger: GCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGTGGGCAGCAAGGAGGTaGGGGCTATCGCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRWAARR*GLSLSS
Trigger: GCTGCTGAGCGATAGCCCCAACCTCCTTGCTGCCCA...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTGGCATGGTCTGTGCTaGCTGCAGCCCTGGATACTG +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATWHGLC*LQPWIL
Trigger: CAGTATCCAGGGCTGCAGCAAGCACAGACCATGCCA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTGCTGCTGTCGAACTaGCGGCTGTCTGGGTCTCAT +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLLLSN*RLSGSH
Trigger: ATGAGACCCAGACAGCCGCAAGTTCGACAGCAGCAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCGGGATGGGAAAATGCTaGGGAGGGTCTAGGTCTATT +
Preference number: 5 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFGMGKC*GGSRSI
Trigger: AATAGACCTAGACCCTCCCAAGCATTTTCCCATCCC...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp AAAACGTCATGTCTTCTCCTCTTGCAGATTCAGAAGTGTGAAGGATaGCCATACGGAGTCACTCCTTGCTGTGGCTGGTTGCTGGAAAGC +
Preference number: 5 (lower is better)
Translates to: KTSCLLLLQIQKCEG*PYGVTPCCGWLLES
Trigger: GCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCACACTTCTGAATCTGCAAGAGGAGAAGACATGACGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp CGAGATATGAGGGTACACATGTATGCGTCATGGGAGAAGACATCATaGCGGATGAACTCGCAGAAGAGCAGCACCAGGTTCACAAATTCC +
Preference number: 5 (lower is better)
Translates to: RDMRVHMYASWEKTS*RMNSQKSSTRFTNS
Trigger: GGAATTTGTGAACCTGGTGCTGCTCTTCTGCGAGTTCATCCGCCATGATGTCTTCTCCCATGACGCATACATGTGTACCCTCATATCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CCA 90 bp ACTGACAAATCTCCTCGAGATATGAGGGTACACATGTATGCGTCATaGGAGAAGACATCATGGCGGATGAACTCGCAGAAGAGCAGCACC +
Preference number: 5 (lower is better)
Translates to: TDKSPRDMRVHMYAS*EKTSWRMNSQKSST
Trigger: GGTGCTGCTCTTCTGCGAGTTCATCCGCCATGATGTCTTCTCCCATGACGCATACATGTGTACCCTCATATCTCGAGGAGATTTGTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCCCCAGGGGATGCATTaGATAGGTCAGAGGCTAACG +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVPQGMH*IGQRLT
Trigger: CGTTAGCCTCTGACCTATCAAATGCATCCCCTGGGG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACTTGTTTGGTGTTGGTaGGGACAAAGGAGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGLVWCW*GQRSLQ
Trigger: CTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTATACGGAGTCACTCCTaGCTGTGGCTGGTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATIRSHS*LWLVAG
Trigger: TCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTAT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 90 bp CCGACTAATAGTCACCCCTGCTGTGGATTCTTGGCACTTGTCAAATaGCCACCGAACTTCCACTGCACGGCCTCTTTGTTTTATCTGTTG +
Preference number: 5 (lower is better)
Translates to: PTNSHPCCGFLALVK*PPNFHCTASLFYLL
Trigger: CAACAGATAAAACAAAGAGGCCGTGCAGTGGAAGTTCGGTGGTCATTTGACAAGTGCCAAGAATCCACAGCAGGGGTGACTATTAGTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGACCACAGCTTCATCGTaGGGCGCAACCTCTTGGTTA +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVTTASS*GATSWL
Trigger: TAACCAAGAGGTTGCGCCCAACGATGAAGCTGTGGT...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGTGCTTGCCAGACCGTTaGCAGCTCACGGCCCATTCA +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRCLPDR*QLTAHS
Trigger: TGAATGGGCCGTGAGCTGCAAACGGTCTGGCAAGCA...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGGTTTACGACATGCTaGACCACACCACACAACCCT +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGFTTC*TTPHNP
Trigger: AGGGTTGTGTGGTGTGGTCAAGCATGTCGTAAACCC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCTTCCCTTTGTTCATCTaGTCCCTTAAGGCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFFPLFI*SLKAGK
Trigger: CTTACCTGCCTTAAGGGACAAGATGAACAAAGGGAA...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTGCTGCTCCTCGTACTaGATCACTCTTCGGTCCACT +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVCCSSY*ITLRST
Trigger: AGTGGACCGAAGAGTGATCAAGTACGAGGAGCAGCA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCCTGAGAAGTCGCTGTaGCTGCTGCTGCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFPEKSL*LLLLQK
Trigger: CTTCTGCAGCAGCAGCAGCAACAGCGACTTCTCAGG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATCTGTGTCCCATACATaGTATAGCCCTGTGGCATGG +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGSVSHT*YSPVAW
Trigger: CCATGCCACAGGGCTATACAATGTATGGGACACAGA...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTGCACGGAGGGAAGGTTaGGATGTGCAGAAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRARREG*DVQKSA
Trigger: TGCTGACTTCTGCACATCCAAACCTTCCCTCCGTGC...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCTCCACTGTGTGGCCTaGGGAGTTCCCAAGCCAGAA +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFLHCVA*GVPKPE
Trigger: TTCTGGCTTGGGAACTCCCAAGGCCACACAGTGGAG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS TCA 90 bp GGGCTGTCTGATCAGGATTCAAGATTAGACAACTGTGATAGCGCCTaGGAACAGCCACGATGCAGACACACAGTCCTGTTGTATAACTTC +
Preference number: 5 (lower is better)
Translates to: GLSDQDSRLDNCDSA*EQPRCRHTVLLYNF
Trigger: GAAGTTATACAACAGGACTGTGTGTCTGCATCGTGGCTGTTCTCAGGCGCTATCACAGTTGTCTAATCTTGAATCCTGATCAGACAGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTTTCACATTCACTGTTaGGGTCCGACAAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVFHIHC*GPTKRG
Trigger: CCCCCTCTTTGTCGGACCCAAACAGTGAATGTGAAA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTCTTCAGCTGATGCCTaGCTTCATCACGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVSSADA*LHHALC
Trigger: GCAAAGAGCGTGATGAAGCAAGGCATCAGCTGAAGA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTCTTCAGCTGATGCCTaGCTTCATCACGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATSSADA*LHHALC
Trigger: GCAAAGAGCGTGATGAAGCAAGGCATCAGCTGAAGA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGGTTCTTCCTGGCTTTTaGTCCTTCGTCCCCAACCCC +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRVLPGF*SFVPNP
Trigger: GGGGTTGGGGACGAAGGACAAAAAGCCAGGAAGAAC...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAAAGTCAATTAGTCCGTaGATGTTCAGTGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGKSISP*MFSAGS
Trigger: GGAGCCAGCACTGAACATCAACGGACTAATTGACTT...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCAATCGCAAGTTCGAATTaGCAGGCATCACGTTATTAT +
Preference number: 5 (lower is better)
Translates to: PVAGSGQSYALISSTSRPIASSN*QASRYY
Trigger: ATAATAACGTGATGCCTGCAAATTCGAACTTGCGAT...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTTAATGTGCTGTCTTaGCAGATTGTCCCCCTCGGT +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLNVLS*QIVPLG
Trigger: ACCGAGGGGGACAATCTGCAAAGACAGCACATTAAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTCATGTATGCACGCTaGTTCTCTTCAGATCCCCCA +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGFMYAR*FSSDPP
Trigger: TGGGGGATCTGAAGAGAACAAGCGTGCATACATGAA...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGCCGCTGTAGCATGTTaGACAGAGCTTGTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVAAVAC*TELVWC
Trigger: ACACCAAACAAGCTCTGTCAAACATGCTACAGCGGC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGGTCTGCTGCAAGCCTaGCCTGGGAAACTGTTGGAA +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFGLLQA*PGKLLE
Trigger: TTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTATACGGAGTCACTCCTaGCTGTGGCTGGTTGCTGGA +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFIRSHS*LWLVAG
Trigger: TCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTAT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCTGTGGCTGGAAGTGGTCAAAGCTACGCATTGATCTCCTCTACTTCCAGGCCATCTGAGCAGGAATCGTaGCTCTATAAGCATTTCATT +
Preference number: 5 (lower is better)
Translates to: PVAGSGQSYALISSTSRPSEQES*LYKHFI
Trigger: AATGAAATGCTTATAGAGCAACGATTCCTGCTCAGA...TGGCCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACCACTTCCAGCCACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp CCTCCTACCAAATTTAGGCGGAGTTGCAATGCTTCGTGCATCATCTaGCGCGCTTTTATGTCATCTTGGTATCGTTCTTCTCTCCAGTTA +
Preference number: 5 (lower is better)
Translates to: PPTKFRRSCNASCII*RAFMSSWYRSSLQL
Trigger: TAACTGGAGAGAAGAACGATACCAAGATGACATAAAAGCGCGGCAGATGATGCACGAAGCATTGCAACTCCGCCTAAATTTGGTAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 90 bp GCCTTGCTTCATCACGCTCTTTGCCGACTCCATAGAGAAGGATTGTaGGCTGGTTACATTCATGACTTGAAGATTCATCCTTGTCTGGTA +
Preference number: 5 (lower is better)
Translates to: ALLHHALCRLHREGL*AGYIHDLKIHPCLV
Trigger: TACCAGACAAGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCAAAGAGCGTGATGAAGCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468305.1
CDS GCA 90 bp GCCTTGCTTCATCACGCTCTTTGCCGACTCCATAGAGAAGGATTGTaGGCTGGTTACATTCATGACTTGAAGATTCATCCTCAGATGGAA +
Preference number: 5 (lower is better)
Translates to: ALLHHALCRLHREGL*AGYIHDLKIHPQME
Trigger: TTCCATCTGAGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCAAAGAGCGTGATGAAGCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491549.5
CDS-3UTR CAA 90 bp GAATTACAAATCGTCCACCCAGGAGTATTGTCACCAGGACAGGGGCAGCCTTTCCTGATTATTGAAGCCTaGCTTTACATTCACAGCAGT +
Preference number: 5 (lower is better)
Translates to: ELQIVHPGVLSPGQGQPFLIIEA*LYIHSS
Trigger: ACTGCTGTGAATGTAAAGCAAGGCTTCAATAATCAG...GAAAGGCTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGACGATTTGTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGTGGATTCTTGGCACTaGTCAAATGACCACCGAACT +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFVDSWH*SNDHRT
Trigger: AGTTCGGTGGTCATTTGACAAGTGCCAAGAATCCAC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTAGTGTCTCCATGGAATaGCTGGAATCAGTTCGGTCA +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATSVSME*LESVRS
Trigger: TGACCGAACTGATTCCAGCAATTCCATGGAGACACT...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTACCACAGCTTCATCGTaGGGCGCAACCTCTTGGTTA +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFTTASS*GATSWL
Trigger: TAACCAAGAGGTTGCGCCCAACGATGAAGCTGTGGT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGCCATGGCCCTGTGCTaGCCAGACCGTTTGCAGCTC +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLAMALC*PDRLQL
Trigger: GAGCTGCAAACGGTCTGGCAAGCACAGGGCCATGGC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTTTTCACATTCACTGTTaGGGTCCGACAAAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRFHIHC*GPTKRG
Trigger: CCCCCTCTTTGTCGGACCCAAACAGTGAATGTGAAA...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTAGACACACAGTCCTGTaGTATAACTTCCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRRHTVL*YNFLPG
Trigger: GCCTGGCAGGAAGTTATACAACAGGACTGTGTGTCT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGGGTTTACGACATGCTaGACCACACCACACAACCCT +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFGFTTC*TTPHNP
Trigger: AGGGTTGTGTGGTGTGGTCAAGCATGTCGTAAACCC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGGAAAGGTTTGCCCGTaGCTTGAGGTAAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFGKVCP*LEVRSR
Trigger: CCTGCTTCTTACCTCAAGCAACGGGCAAACCTTTCC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCCAATACTGTTTGGGTaGAAGAGGCTCATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVPILFG*KRLMPE
Trigger: TTCTGGCATGAGCCTCTTCAACCCAAACAGTATTGG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTGCTGCTCCTCGTACTaGATCACTCTTCGGTCCACT +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRICCSSY*ITLRST
Trigger: AGTGGACCGAAGAGTGATCAAGTACGAGGAGCAGCA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGCTTGTTTGGTGTTGGTaGGGACAAAGGAGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRLVWCW*GQRSLQ
Trigger: CTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAG...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTTGTGGAATAGCGCCCTaGGGTTTTCATCACACTGAC +
Preference number: 5 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRCGIAP*GFHHTD
Trigger: GTCAGTGTGATGAAAACCCAAGGGCGCTATTCCACA...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTTCAGGCACCCCTGGTTaGGAGCTGTTTATAAGGAAA +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFSGTPG*ELFIRK
Trigger: TTTCCTTATAAACAGCTCCAAACCAGGGGTGCCTGA...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCTACTTCATAAATCCTaGCCCGAACCTGCAGCATTA +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATLLHKS*PEPAAL
Trigger: TAATGCTGCAGGTTCGGGCAAGGATTTATGAAGTAG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCACTGCACGGCCTCTTaGTTTTATCTGTTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFHCTAS*FYLLFY
Trigger: GTAGAACAACAGATAAAACAAAGAGGCCGTGCAGTG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCACTGCACGGCCTCTTaGTTTTATCTGTTGTTCTAC +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATHCTAS*FYLLFY
Trigger: GTAGAACAACAGATAAAACAAAGAGGCCGTGCAGTG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATCTTCTCCAGGAGTTTaGCCACAGCCATGGCCCTGT +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKISSPGV*PQPWPC
Trigger: ACAGGGCCATGGCTGTGGCAAAACTCCTGGAGAAGA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCTCCATAGAGAAGGATaGTGCGCTGGTTACATTCAT +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFLHREG*CAGYIH
Trigger: ATGAATGTAACCAGCGCACAATCCTTCTCTATGGAG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTAAGTCAATTAGTCCGTaGATGTTCAGTGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRKSISP*MFSAGS
Trigger: GGAGCCAGCACTGAACATCAACGGACTAATTGACTT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAGACACACAGTCCTGTaGTATAACTTCCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRRHTVL*YNFLPG
Trigger: GCCTGGCAGGAAGTTATACAACAGGACTGTGTGTCT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTACCCCCACACGTGATTaGAAGAACAACAAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRTPTRD*KNNKEP
Trigger: AGGCTCTTTGTTGTTCTTCAAATCACGTGTGGGGGT...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTGCTGTCTTTGCAGATaGTCCCCCTCGGTACATTCT +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRICCLCR*SPSVHS
Trigger: AGAATGTACCGAGGGGGACAATCTGCAAAGACAGCA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTCTGTCTCGTGCTACTaGTATCAGCACTTCCAATAC +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATSVSCY*YQHFQY
Trigger: GTATTGGAAGTGCTGATACAAGTAGCACGAGACAGA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGTCTGTCTCGTGCTACTaGTATCAGCACTTCCAATAC +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVSVSCY*YQHFQY
Trigger: GTATTGGAAGTGCTGATACAAGTAGCACGAGACAGA...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACGCTTTTATGTCATCTaGGTATCGTTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGRFYVI*VSFFSP
Trigger: TGGAGAGAAGAACGATACCAAGATGACATAAAAGCG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGGAGGCTAACGTTCCATaGATTAAAACACCCAGCATG +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVEANVP*IKTPSM
Trigger: CATGCTGGGTGTTTTAATCAATGGAACGTTAGCCTC...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGGCACTCGGTATATGTaGCTCTGTGGATATTCATCA +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFGTRYM*LCGYSS
Trigger: TGATGAATATCCACAGAGCAACATATACCGAGTGCC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAGAGCTTGTTTGGTGTaGGTTGGGACAAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRRACLV*VGTKEP
Trigger: AGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGAGCTTGTTTGGTGTaGGTTGGGACAAAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFRACLV*VGTKEP
Trigger: AGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGCCGCTGTAGCATGTTaGACAGAGCTTGTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIAAVAC*TELVWC
Trigger: ACACCAAACAAGCTCTGTCAAACATGCTACAGCGGC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACCTTGCTGTGGCTGGTaGCTGGAAAGCTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: TFQIRAMQINVRFTITGEPCCGW*LESCFW
Trigger: CCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGCCCCGATACTCGAGTaGTTTGGTCCTATCATCATG +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFAPILE*FGPIIM
Trigger: CATGATGATAGGACCAAACAACTCGAGTATCGGGGC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGGGGTGAGCCTGGGTTaGCGCTCTTATTTTCATTTG +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFGVSLG*RSYFHL
Trigger: CAAATGAAAATAAGAGCGCAAACCCAGGCTCACCCC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCAGCAAAGAACCCACTaGGTAGTGATTATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVQQRTH*VVIMQQ
Trigger: TTGCTGCATAATCACTACCAAGTGGGTTCTTTGCTG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGTCCACCCAGGAGTATaGTCACCAGGACAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFVHPGV*SPGQGQ
Trigger: CTGCCCCTGTCCTGGTGACAATACTCCTGGGTGGAC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS TCA 90 bp TCACTCACATCTACAGTGCAAAGTACATCATTAAACCCCCACACGTaGTTTGAAGAACAACAAAGAGCCTTCAGAACCCCCAGCCATTCT +
Preference number: 5 (lower is better)
Translates to: SLTSTVQSTSLNPHT*FEEQQRAFRTPSHS
Trigger: AGAATGGCTGGGGGTTCTGAAGGCTCTTTGTTGTTCTTCAAATCACGTGTGGGGGTTTAATGATGTACTTTGCACTGTAGATGTGAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 90 bp ATTGCTTTTAAGACAGCAAACACGGCTCCCACTTCAATGCTGTTGTaGGCAGCGGCTAAGAGGTGTCTATCACAAGATGATCTTATTCCA +
Preference number: 5 (lower is better)
Translates to: IAFKTANTAPTSMLL*AAAKRCLSQDDLIP
Trigger: TGGAATAAGATCATCTTGTGATAGACACCTCTTAGCCGCTGCTCACAACAGCATTGAAGTGGGAGCCGTGTTTGCTGTCTTAAAAGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 90 bp TCAAACATTCCTCCTACCAAATTTAGGCGGAGTTGCAATGCTTCGTaGATCATCTGCCGCGCTTTTATGTCATCTTGGTATCGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SNIPPTKFRRSCNAS*IICRAFMSSWYRSS
Trigger: AGAAGAACGATACCAAGATGACATAAAAGCGCGGCAGATGATGCACGAAGCATTGCAACTCCGCCTAAATTTGGTAGGAGGAATGTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCCATTGCTTCATGGCTaGCTCCACCTCTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFPLLHG*LHLWWH
Trigger: GTGCCACCAGAGGTGGAGCAAGCCATGAAGCAATGG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTAGTGTCTCCATGGAATaGCTGGAATCAGTTCGGTCA +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRISVSME*LESVRS
Trigger: TGACCGAACTGATTCCAGCAATTCCATGGAGACACT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTGTTGGGCGCAACCTCTaGGTTATCTTTGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRVGRNL*VIFVLV
Trigger: AACCAAAACAAAGATAACCAAGAGGTTGCGCCCAAC...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGAGAAAAATTAATTCCCTaGGCTTTTCCCTCTTCACCA +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGEKLIP*AFPSSP
Trigger: TGGTGAAGAGGGAAAAGCCAAGGGAATTAATTTTTC...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAGTTCTTCCTGGCTTTTaGTCCTTCGTCCCCAACCCC +
Preference number: 5 (lower is better)
Translates to: TFQIRAMQINVRFTITGEVLPGF*SFVPNP
Trigger: GGGGTTGGGGACGAAGGACAAAAAGCCAGGAAGAAC...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGACTGTTATTGCCAATTTaGGCATCTCCAAGCATCATA +
Preference number: 5 (lower is better)
Translates to: FSGNHVKCEHWNLKPATGLLLPI*ASPSII
Trigger: TATGATGCTTGGAGATGCCAAAATTGGCAATAACAG...TCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGGCACCCCTGGTTTGGAGCTGTTTATAAGGAAATTTTTCTGAGCAGGAATCGTGAGCTGACACTGTTATaGCCAATTTTGGCATCTCCA +
Preference number: 5 (lower is better)
Translates to: RHPWFGAVYKEIFLSRNRELTLL*PILASP
Trigger: TGGAGATGCCAAAATTGGCAATAACAGTGTCAGCTC...ACGATTCCTGCTCAGAAAAATTTCCTTATAAACAGCTCCAAACCAGGGGTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTTTTCAGCACTCTTCCTaGCACAGAAGTTGGCAACCT +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIFQHSS*HRSWQP
Trigger: AGGTTGCCAACTTCTGTGCAAGGAAGAGTGCTGAAA...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTTTCAGCACTCTTCCTaGCACAGAAGTTGGCAACCT +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFFQHSS*HRSWQP
Trigger: AGGTTGCCAACTTCTGTGCAAGGAAGAGTGCTGAAA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCGCTTTTATGTCATCTaGGTATCGTTCTTCTCTCCA +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATRFYVI*VSFFSP
Trigger: TGGAGAGAAGAACGATACCAAGATGACATAAAAGCG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTTTCATGTATGCACGCTaGTTCTCTTCAGATCCCCCA +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFFMYAR*FSSDPP
Trigger: TGGGGGATCTGAAGAGAACAAGCGTGCATACATGAA...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTCATGTCTTCTCCTCTaGCAGATTCAGAAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATSCLLL*QIQKCE
Trigger: TTCACACTTCTGAATCTGCAAGAGGAGAAGACATGA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTCGATACTCGAGTTGTTaGGTCCTATCATCATGTGGG +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFRYSSC*VLSSCG
Trigger: CCCACATGATGATAGGACCAAACAACTCGAGTATCG...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS TCA 90 bp ACAATATTTCTGGCTGAGCCATGTTCATCTCCAGTGAAGGCTGGCTaGTTATTGAAGCCTTGCTTTACATTCACAGCAGTAAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: TIFLAEPCSSPVKAG*LLKPCFTFTAVSSS
Trigger: GGATGAACTTACTGCTGTGAATGTAAAGCAAGGCTTCAATAATCAGCCAGCCTTCACTGGAGATGAACATGGCTCAGCCAGAAATATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000469768.1
ENST00000474524.5
CDS TCA 90 bp GCCTTCCCTTTGTTCATCTTGTCCCTTAAGGCAGGTAAGTACCAGTaGGAGGAAGGGTTGTTGACTCAAAAGAGACATACTTTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: AFPLFILSLKAGKYQ*EEGLLTQKRHTFLF
Trigger: AAACAGAAAAGTATGTCTCTTTTGAGTCAACAACCCTTCCTCTCACTGGTACTTACCTGCCTTAAGGGACAAGATGAACAAAGGGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGTTGGGCGCAACCTCTaGGTTATCTTTGTTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIVGRNL*VIFVLV
Trigger: AACCAAAACAAAGATAACCAAGAGGTTGCGCCCAAC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACTGCCCAACGAAGTGTaGGCATTCTCACAGGATTCT +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILPNEV*AFSQDS
Trigger: AGAATCCTGTGAGAATGCCAACACTTCGTTGGGCAG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGACACAGTCTCCAGTGTaGGAAATGTCTCCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRTQSPV*EMSPVC
Trigger: ACAAACAGGAGACATTTCCAACACTGGAGACTGTGT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTACACAGTCTCCAGTGTaGGAAATGTCTCCTGTTTGT +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRITQSPV*EMSPVC
Trigger: ACAAACAGGAGACATTTCCAACACTGGAGACTGTGT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGCTCAGAGGAGAAATaGGCTATGTCGTTAATCCTG +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFSSEEK*AMSLIL
Trigger: CAGGATTAACGACATAGCCAATTTCTCCTCTGAGCT...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGAGCTGACACTGTTATaGCCAATTTTGGCATCTCCA +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFELTLL*PILASP
Trigger: TGGAGATGCCAAAATTGGCAATAACAGTGTCAGCTC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTATATTGTCCAGTAAGTaGTTCATTTCGGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFILSSK*FISATE
Trigger: TTCTGTGGCCGAAATGAACAACTTACTGGACAATAT...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCCTCTATTGTTGCCTTaGCAATATTGTCCAGTAAGT +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATPLLLP*QYCPVS
Trigger: ACTTACTGGACAATATTGCAAAGGCAACAATAGAGG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTCCTCTATTGTTGCCTTaGCAATATTGTCCAGTAAGT +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFPLLLP*QYCPVS
Trigger: ACTTACTGGACAATATTGCAAAGGCAACAATAGAGG...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGTTCCCTTTGTTCATCTaGTCCCTTAAGGCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRFPLFI*SLKAGK
Trigger: CTTACCTGCCTTAAGGGACAAGATGAACAAAGGGAA...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGAGGCTAACGTTCCATaGATTAAAACACCCAGCATG +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFEANVP*IKTPSM
Trigger: CATGCTGGGTGTTTTAATCAATGGAACGTTAGCCTC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTACCCCAGGGGATGCATTaGATAGGTCAGAGGCTAACG +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLPQGMH*IGQRLT
Trigger: CGTTAGCCTCTGACCTATCAAATGCATCCCCTGGGG...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CCAAAACTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTGAGCTAGATTTCGTCTaGCGCTTCCTTCCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: PKLAINSWTIPLQFFQAFELDFV*RFLPFV
Trigger: AACAAAAGGAAGGAAGCGCAAGACGAAATCTAGCTC...AAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAGTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGAGCTAGATTTCGTCTaGCGCTTCCTTCCTTTTGTT +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIELDFV*RFLPFV
Trigger: AACAAAAGGAAGGAAGCGCAAGACGAAATCTAGCTC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTTTTCAAATCAGTAGTTaGGTCCAGCACAGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATFQISS*VQHSLE
Trigger: TTCCAAACTGTGCTGGACCAAACTACTGATTTGAAA...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 90 bp AGCTTCATCGTTGGGCGCAACCTCTTGGTTATCTTTGTTTTGGTTTaGCCAGAAAATCTTATGATAAAGTGTCTCCATGGAATTGCTGGA +
Preference number: 5 (lower is better)
Translates to: SFIVGRNLLVIFVLV*PENLMIKCLHGIAG
Trigger: TCCAGCAATTCCATGGAGACACTTTATCATAAGATTTTCTGGGCAAACCAAAACAAAGATAACCAAGAGGTTGCGCCCAACGATGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS GCA 90 bp TTTCTGTTTTTCAGTGCAAACATAAAACGTCATGTCTTCTCCTCTTaGAGATTCAGAAGTGTGAAGGATGCCCATACGGAGTCACTCCTT +
Preference number: 5 (lower is better)
Translates to: FLFFSANIKRHVFSS*RFRSVKDAHTESLL
Trigger: AAGGAGTGACTCCGTATGGGCATCCTTCACACTTCTGAATCTGCAAGAGGAGAAGACATGACGTTTTATGTTTGCACTGAAAAACAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp TGCGCTCTTATTTTCATTTGTGGAATAATTCCACACCAAGGCACTTaGGCAACAGAGAGTGACAGTCTGCAACATACAACTAAGTCCATA +
Preference number: 5 (lower is better)
Translates to: CALIFICGIIPHQGT*ATESDSLQHTTKSI
Trigger: TATGGACTTAGTTGTATGTTGCAGACTGTCACTCTCTGTTGCCCAAGTGCCTTGGTGTGGAATTATTCCACAAATGAAAATAAGAGCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATTCGTTGTATTCCCATaGCTTCATGGCTTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIFVVFP*LHGLLH
Trigger: GTGGAGCAAGCCATGAAGCAATGGGAATACAACGAA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAACTGCCCAACGAAGTGTaGGCATTCTCACAGGATTCT +
Preference number: 5 (lower is better)
Translates to: TFQIRAMQINVRFTITGELPNEV*AFSQDS
Trigger: AGAATCCTGTGAGAATGCCAACACTTCGTTGGGCAG...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGGAAAGGTTTGCCCGTaGCTTGAGGTAAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLGKVCP*LEVRSR
Trigger: CCTGCTTCTTACCTCAAGCAACGGGCAAACCTTTCC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATCCTACCCATTCCTGTaGACAGATAGTCCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKISYPFL*TDSPQY
Trigger: GTACTGAGGACTATCTGTCAACAGGAATGGGTAGGA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGTCCTTCAAGCACTGTTaGATCATTAGCTGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRSFKHC*IISWSS
Trigger: AGAACTCCAGCTAATGATCAAACAGTGCTTGAAGGA...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTGGATTTTGTTGCCTTTGCAATATaGTCCAGTAAGTTGTTCATT +
Preference number: 5 (lower is better)
Translates to: LETMSSVSTGISSQLLDFVAFAI*SSKLFI
Trigger: AATGAACAACTTACTGGACAATATTGCAAAGGCAAC...AAAATCCAGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp TCCGGGAGTAGGCCTGCCTGCATGATTCACATTTGTAAACCTACTTTAAAGGTGCAATTTTGTTTCCTTTaGTGTCAATCAAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: SGSRPACMIHICKPTLKVQFCFL*CQSRNP
Trigger: TGGGTTCCTTGATTGACACAAAAGGAAACAAAATTG...CACCTTTAAAGTAGGTTTACAAATGTGAATCATGCAGGCAGGCCTACTCCCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATTCTCTGGAAACCATGTCAAGTGTGAGCACTGGAATCTCAAGCCAGCTACTCAATTTTGTTTCCTTTaGTGTCAATCAAGGAACCCA +
Preference number: 5 (lower is better)
Translates to: RFSGNHVKCEHWNLKPATQFCFL*CQSRNP
Trigger: TGGGTTCCTTGATTGACACAAAAGGAAACAAAATTG...AGTAGCTGGCTTGAGATTCCAGTGCTCACACTTGACATGGTTTCCAGAGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTCTGTTTCAGCACCTTTaGACCACAACAAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRILFQHL*TTTKAK
Trigger: CTTTGCTTTTGTTGTGGTCAAAAGGTGCTGAAACAG...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAACCCCCACACGTGATTaGAAGAACAACAAAGAGCCT +
Preference number: 5 (lower is better)
Translates to: TFQIRAMQINVRFTITGETPTRD*KNNKEP
Trigger: AGGCTCTTTGTTGTTCTTCAAATCACGTGTGGGGGT...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTCTGTTATTGCCAATTTaGGCATCTCCAAGCATCATA +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRILLLPI*ASPSII
Trigger: TATGATGCTTGGAGATGCCAAAATTGGCAATAACAG...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATGCTGTCTTTGCAGATaGTCCCCCTCGGTACATTCT +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLCCLCR*SPSVHS
Trigger: AGAATGTACCGAGGGGGACAATCTGCAAAGACAGCA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCTTAATGTGCTGTCTTaGCAGATTGTCCCCCTCGGT +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFLNVLS*QIVPLG
Trigger: ACCGAGGGGGACAATCTGCAAAGACAGCACATTAAG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTATATTGTCCAGTAAGTaGTTCATTTCGGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIILSSK*FISATE
Trigger: TTCTGTGGCCGAAATGAACAACTTACTGGACAATAT...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATTTGACAGAGCTTGTTaGGTGTTGGTTGGGACAAAG +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIFDRAC*VLVGTK
Trigger: CTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGAACCACAACTTCTCCTaGGCTTTTTGTTTAAACACC +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRNHNFS*AFCLNT
Trigger: GGTGTTTAAACAAAAAGCCAAGGAGAAGTTGTGGTT...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGGTCAAAGCTACGCATaGATCTCCTCTACTTCCAGG +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFGQSYA*ISSTSR
Trigger: CCTGGAAGTAGAGGAGATCAATGCGTAGCTTTGACC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 90 bp AAGAGGCTCATGCCAGAATTAGAAGAATTATTTAGGTCTGCAGACTaGTGGAATACCTCTATTGTTGCCTTTGCAATATTGTCCAGTAAG +
Preference number: 5 (lower is better)
Translates to: KRLMPELEELFRSAD*WNTSIVAFAILSSK
Trigger: CTTACTGGACAATATTGCAAAGGCAACAATAGAGGTATTCCAGCAGTCTGCAGACCTAAATAATTCTTCTAATTCTGGCATGAGCCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 90 bp GGATCGAGCAGTAACCAGCCAATAATTATCTTTAGCATTAACTTGTaGTTTCTTCTTTCCCGTGTCCTGGAAAGTGTTAAGCTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: GSSSNQPIIIFSINL*FLLSRVLESVKLQF
Trigger: AAACTGAAGCTTAACACTTTCCAGGACACGGGAAAGAAGAAACCACAAGTTAATGCTAAAGATAATTATTGGCTGGTTACTGCTCGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000469768.1
ENST00000474524.5
CDS CCA 90 bp AGGCTCATGCCAGAATTAGAAGAATTATTTAGGTCTGCAGACTGCTaGAATACCTCTATTGTTGCCTTTGCAATATTGTCCAGTAAGTTG +
Preference number: 5 (lower is better)
Translates to: RLMPELEELFRSADC*NTSIVAFAILSSKL
Trigger: CAACTTACTGGACAATATTGCAAAGGCAACAATAGAGGTATTCCAGCAGTCTGCAGACCTAAATAATTCTTCTAATTCTGGCATGAGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCAGAATAAACAGGCATTTAGTAACTGTATaGCGAAGTCAATTAGTCCGT +
Preference number: 5 (lower is better)
Translates to: AMQINVRFTITGECRINRHLVTV*RSQLVR
Trigger: ACGGACTAATTGACTTCGCAATACAGTTACTAAATG...CCTGTTTATTCTGCATTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATTTTCCCACAGGATTTaGGATTTTGTGAGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: TFQIRAMQINVRFTITGEFSHRI*DFVRQS
Trigger: GGACTGCCTCACAAAATCCAAAATCCTGTGGGAAAA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp CTGGCAATAAATAGTTGGACGATTCCACTGCAGTTCTTTCAGGCCTTTAGGATTGCGTATTCTCTTAAATaGGCAGTTTCTATGGAAATG +
Preference number: 5 (lower is better)
Translates to: LAINSWTIPLQFFQAFRIAYSLK*AVSMEM
Trigger: CATTTCCATAGAAACTGCCAATTTAAGAGAATACGC...AATCCTAAAGGCCTGAAAGAACTGCAGTGGAATCGTCCAACTATTTATTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATCCTACCCATTCCTGTaGACAGATAGTCCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLSYPFL*TDSPQY
Trigger: GTACTGAGGACTATCTGTCAACAGGAATGGGTAGGA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACTGATTATTGAAGCCTaGCTTTACATTCACAGCAGT +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKILIIEA*LYIHSS
Trigger: ACTGCTGTGAATGTAAAGCAAGGCTTCAATAATCAG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTACTCCATAGAGAAGGATaGTGCGCTGGTTACATTCAT +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLLHREG*CAGYIH
Trigger: ATGAATGTAACCAGCGCACAATCCTTCTCTATGGAG...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAATCGCAAGTTCGAATTaGCAGGCATCACGTTATTAT +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIIASSN*QASRYY
Trigger: ATAATAACGTGATGCCTGCAAATTCGAACTTGCGAT...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTAGCTCAGAGGAGAAATaGGCTATGTCGTTAATCCTG +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFSSEEK*AMSLIL
Trigger: CAGGATTAACGACATAGCCAATTTCTCCTCTGAGCT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTTTTCCCACAGGATTTaGGATTTTGTGAGGCAGTCC +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFFSHRI*DFVRQS
Trigger: GGACTGCCTCACAAAATCCAAAATCCTGTGGGAAAA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGGCACTCGGTATATGTaGCTCTGTGGATATTCATCA +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLGTRYM*LCGYSS
Trigger: TGATGAATATCCACAGAGCAACATATACCGAGTGCC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTACCTGGAGTAAGAGATaGGTTCTGAAGGAAAAAGCC +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFTWSKR*VLKEKA
Trigger: GGCTTTTTCCTTCAGAACCAATCTCTTACTCCAGGT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAACCTGGAGTAAGAGATaGGTTCTGAAGGAAAAAGCC +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLTWSKR*VLKEKA
Trigger: GGCTTTTTCCTTCAGAACCAATCTCTTACTCCAGGT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATTTGACAGAGCTTGTTaGGTGTTGGTTGGGACAAAG +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLFDRAC*VLVGTK
Trigger: CTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATTTGATTTCAAGGTCTaGTCTTTAAGGGGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLFDFKV*SLRGAG
Trigger: CCCAGCTCCCCTTAAAGACAAGACCTTGAAATCAAA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS TCA 90 bp CACATTGTTAGAAATCTGAGATGTCACTTGATGTTGATCAAAATATaGAAGGAGCTGGAGTTTAGTGAACACAGTCTCCAGTGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: HIVRNLRCHLMLIKI*KELEFSEHSLQCWK
Trigger: TTTCCAACACTGGAGACTGTGTTCACTAAACTCCAGCTCCTTTCATATTTTGATCAACATCAAGTGACATCTCAGATTTCTAACAATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000491549.5
CDS TCA 90 bp TTTAAAGTCACTCTTGTCTACTTCATCAAAAATGTTAGTGGTTCCTaGGTCAATGCCCATATGCGCCATAATACTCTGTTCCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: FKVTLVYFIKNVSGS*VNAHMRHNTLFLHF
Trigger: AAAATGGAGGAACAGAGTATTATGGCGCATATGGGCATTGACTCAGGAACCACTAACATTTTTGATGAAGTAGACAAGAGTGACTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309237.8
CDS GCA 90 bp CATCGCAAGTTCGAATTTGCAGGCATCACGTTATTATATATGGTTTaGTTTACTTTTGAACAGGCACTACTGAAGAGGTCTCCAAATTTA +
Preference number: 5 (lower is better)
Translates to: HRKFEFAGITLLYMV*FTFEQALLKRSPNL
Trigger: TAAATTTGGAGACCTCTTCAGTAGTGCCTGTTCAAAAGTAAAGCAAACCATATATAATAACGTGATGCCTGCAAATTCGAACTTGCGATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAAAATGCTAGCTTTTCGTaGTATTCCCATTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: TFQIRAMQINVRFTITGENASFS*YSHCFM
Trigger: CATGAAGCAATGGGAATACAACGAAAAGCTAGCATT...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATCCTTCAAGCACTGTTaGATCATTAGCTGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLSFKHC*IISWSS
Trigger: AGAACTCCAGCTAATGATCAAACAGTGCTTGAAGGA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATCATGTCTTCTCCTCTaGCAGATTCAGAAGTGTGAA +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLSCLLL*QIQKCE
Trigger: TTCACACTTCTGAATCTGCAAGAGGAGAAGACATGA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCTGTTTCAGCACCTTTaGACCACAACAAAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFLFQHL*TTTKAK
Trigger: CTTTGCTTTTGTTGTGGTCAAAAGGTGCTGAAACAG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATATGCCTCAAAACAAATTaGAGTACAGCTACTTCTAAC +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKICLKTN*STATSN
Trigger: GTTAGAAGTAGCTGTACTCAAATTTGTTTTGAGGCA...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp AGATCTGACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATACGCTCTTATTTTCATTaGTGGAATAATTCCACACCA +
Preference number: 5 (lower is better)
Translates to: RSDMPFKSVVWSSTVWKIRSYFH*WNNSTP
Trigger: TGGTGTGGAATTATTCCACAAATGAAAATAAGAGCG...TATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTCAGATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAAATGCTAGCTTTTCGTaGTATTCCCATTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLNASFS*YSHCFM
Trigger: CATGAAGCAATGGGAATACAACGAAAAGCTAGCATT...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATCTTTTCTTCATCTGTaGTGGTTTTTCCCTGATCTG +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLSFLHL*WFFPDL
Trigger: CAGATCAGGGAAAAACCACAACAGATGAAGAAAAGA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTTCTTTTCTTCATCTGTaGTGGTTTTTCCCTGATCTG +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFSFLHL*WFFPDL
Trigger: CAGATCAGGGAAAAACCACAACAGATGAAGAAAAGA...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTATTTCAAATCAGTAGTTaGGTCCAGCACAGTTTGGAA +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLFQISS*VQHSLE
Trigger: TTCCAAACTGTGCTGGACCAAACTACTGATTTGAAA...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp ACATTTCAAATTAGAGCGATGCAAATAAATGTCCGTTTCACCATCACAGGTGAATGCCTCAAAACAAATTaGAGTACAGCTACTTCTAAC +
Preference number: 5 (lower is better)
Translates to: TFQIRAMQINVRFTITGECLKTN*STATSN
Trigger: GTTAGAAGTAGCTGTACTCAAATTTGTTTTGAGGCA...TTCACCTGTGATGGTGAAACGGACATTTATTTGCATCGCTCTAATTTGAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTACATTCACATTTCGGTaGATTTGCCAATGCAGTCAT +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFTFTFR*ICQCSH
Trigger: ATGACTGCATTGGCAAATCAACCGAAATGTGAATGT...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS-3UTR CAA 90 bp GACATGCCTTTCAAATCAGTAGTTTGGTCCAGCACAGTTTGGAAAATAAAATTAGCGTATTCTCTTAAATaGGCAGTTTCTATGGAAATG +
Preference number: 5 (lower is better)
Translates to: DMPFKSVVWSSTVWKIKLAYSLK*AVSMEM
Trigger: CATTTCCATAGAAACTGCCAATTTAAGAGAATACGC...TAATTTTATTTTCCAAACTGTGCTGGACCAAACTACTGATTTGAAAGGCATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTGTTGCCTTTGCAATATaGTCCAGTAAGTTGTTCATT +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFVAFAI*SSKLFI
Trigger: AATGAACAACTTACTGGACAATATTGCAAAGGCAAC...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS-3UTR CAA 90 bp GTTCTTGGTTTAAGAAGTTTAAGTACGAAGCAACAATCTGTTTCAGCACCTTTTCACATTTCGGTTGATTaGCCAATGCAGTCATTATAT +
Preference number: 5 (lower is better)
Translates to: VLGLRSLSTKQQSVSAPFHISVD*PMQSLY
Trigger: ATATAATGACTGCATTGGCAAATCAACCGAAATGTG...AAAAGGTGCTGAAACAGATTGTTGCTTCGTACTTAAACTTCTTAAACCAAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CAA 90 bp GCGGTATCTGCCTCGCCCGGACGAGCTCCGGGAACGCCGCGAAGTTaGCCACTGTCTGGGGGCGGCGAGCGACGCCGGCTCGCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: AVSASPGRAPGTPRS*PLSGGGERRRLAAG
Trigger: GCCGGCGGCGAGCCGGCGTCGCTCGCCGCCCCCAGACAGTGGCAAACTTCGCGGCGTTCCCGGAGCTCGTCCGGGCGAGGCAGATACCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469768.1
CDS GCA 72 bp CGCACTGATGGGGACAGCCTTCGGCGGGTACTCGGCTaGGCTCGAGCCCCGGGACGCACCGCTCCGGTGGCG +
Preference number: 6 (lower is better)
Translates to: RTDGDSLRRVLG*ARAPGRTAPVA
Trigger: CGCCACCGGAGCGGTGCGTCCCGGGGCTCGAGCGCAGCCGAGTACCCGCCGAAGGCTGTCCCCATCAGTGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309237.8
ENST00000422248.6
CDS CCA 72 bp ACGAGCTCCGGGAACGCCGCGAAGTTTGCCACTGTCTaGGGGCGGCGAGCGACGCCGGCTCGCCGCCGGCGT +
Preference number: 6 (lower is better)
Translates to: TSSGNAAKFATV*GRRATPARRRR
Trigger: ACGCCGGCGGCGAGCCGGCGTCGCTCGCCGCCCCCAGACAGTGGCAAACTTCGCGGCGTTCCCGGAGCTCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469768.1
CDS TCA 72 bp GTTGGATGCTGCCGCTGCCCGGCAGCAGACACGCACTaGTGGGGACAGCCTTCGGCGGGTACTCGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: VGCCRCPAADTH*WGQPSAGTRLR
Trigger: GCGCAGCCGAGTACCCGCCGAAGGCTGTCCCCATCAGTGCGTGTCTGCTGCCGGGCAGCGGCAGCATCCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309237.8
ENST00000422248.6
CDS GCA 72 bp TGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTaGTGCTGCTGGGTCTGCTGCAAGCCTTGCCTGGGA +
Preference number: 6 (lower is better)
Translates to: CFWSCRTKAAVC*CCWVCCKPCLG
Trigger: TCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp AGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTaGTGCTGCTGCTGGGTCTGCTGCAAGCCTTGCCTG +
Preference number: 6 (lower is better)
Translates to: SCFWSCRTKAAV*CCCWVCCKPCL
Trigger: CAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp AGCTGCCGCACCAAGGCGGCCGTCTGCTGCTGCTGCTaGGTCTGCTGCAAGCCTTGCCTGGGAAACAAGGGC +
Preference number: 6 (lower is better)
Translates to: SCRTKAAVCCCC*VCCKPCLGNKG
Trigger: GCCCTTGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 72 bp TTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTaGTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAAC +
Preference number: 6 (lower is better)
Translates to: FWSCRTKAAVCC*CWVCCKPCLGN
Trigger: GTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp AGCTGCCGCACCAAGGCGGCCGTCTGCTGCTGCTGCTaGGTCTGCTGCAAGCCTTGCCTGGGAAACTGTTGG +
Preference number: 6 (lower is better)
Translates to: SCRTKAAVCCCC*VCCKPCLGNCW
Trigger: CCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CCA 72 bp TGGTCCCCCGGCTGGCCCTGTTGGAAAGGCCGAGTCTaGGCTTGCCTGAGAAGTCGCTGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: WSPGWPCWKGRV*ACLRSRCCCCC
Trigger: GCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGGGCCAGCCGGGGGACCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CAA 90 bp CACCAAGGCGGCCGTCTGCTGCTGCTGCTGGGTCTGCTGCAAGCCTaGCCTGGGAAACAAGGGCTGCTGGGGCTGCATTGCTTGGAGACC +
Preference number: 6 (lower is better)
Translates to: HQGGRLLLLLGLLQA*PGKQGLLGLHCLET
Trigger: GGTCTCCAAGCAATGCAGCCCCAGCAGCCCTTGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 72 bp GGAGTCACTCCTTGCTGTGGCTGGTTGCTGGAAAGCTaGTTCTGGAGCTGCCGCACCAAGGCGGCCGTCTGC +
Preference number: 6 (lower is better)
Translates to: GVTPCCGWLLES*FWSCRTKAAVC
Trigger: GCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp CCCGGCTGGCCCTGTTGGAAAGGCCGAGTCTGGGCTTaGCTGAGAAGTCGCTGTTGCTGCTGCTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: PGWPCWKGRVWA*LRSRCCCCCCR
Trigger: TCTGCAGCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGGGCCAGCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CCA 72 bp ACTCCTTGCTGTGGCTGGTTGCTGGAAAGCTGCTTCTaGAGCTGCCGCACCAAGGCGGCCGTCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: TPCCGWLLESCF*SCRTKAAVCCC
Trigger: GCAGCAGCAGACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp GGAGGAGTCTCTGCTGCTGTCGAACTTGCGGCTGTCTaGGTCTCATGGGATCCTGAGGCAGGGGCACGGAGG +
Preference number: 6 (lower is better)
Translates to: GGVSAAVELAAV*VSWDPEAGARR
Trigger: CCTCCGTGCCCCTGCCTCAGGATCCCATGAGACCCAGACAGCCGCAAGTTCGACAGCAGCAGAGACTCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CAA 72 bp GGCCGTCTGCTGCTGCTGCTGGGTCTGCTGCAAGCCTaGCCTGGGAAACTGTTGGAAAGGCCGAGTCTGGGC +
Preference number: 6 (lower is better)
Translates to: GRLLLLLGLLQA*PGKLLERPSLG
Trigger: GCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CAA 90 bp CACCAAGGCGGCCGTCTGCTGCTGCTGCTGGGTCTGCTGCAAGCCTaGCCTGGGAAACTGTTGGAAAGGCCGAGTCTGGGCTTGCCTGAG +
Preference number: 6 (lower is better)
Translates to: HQGGRLLLLLGLLQA*PGKLLERPSLGLPE
Trigger: CTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGCCGCCTTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CAA 90 bp CTGCTGGGGCTGCTGCATCTGGAGGAGTCTCTGCTGCTGTCGAACTaGCGGCTGTCTGGGTCTCATGGGATCCTGAGGCAGGGGCACGGA +
Preference number: 6 (lower is better)
Translates to: LLGLLHLEESLLLSN*RLSGSHGILRQGHG
Trigger: TCCGTGCCCCTGCCTCAGGATCCCATGAGACCCAGACAGCCGCAAGTTCGACAGCAGCAGAGACTCCTCCAGATGCAGCAGCCCCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 72 bp GCCGTCTGCTGCTGCTGCTGGGTCTGCTGCAAGCCTTaGCTGGGAAACTGTTGGAAAGGCCGAGTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: AVCCCCWVCCKP*LGNCWKGRVWA
Trigger: AGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAGACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CCA 72 bp GTATTCCCATTGCTTCATGGCTTGCTCCACCTCTGGTaGCACAGGGACAGGGCCATCGCCCGTGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: VFPLLHGLLHLW*HRDRAIARAGG
Trigger: GCCTCCAGCACGGGCGATGGCCCTGTCCCTGTGCCACCAGAGGTGGAGCAAGCCATGAAGCAATGGGAATAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CCA 72 bp GCCCATACGGAGTCACTCCTTGCTGTGGCTGGTTGCTaGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGG +
Preference number: 6 (lower is better)
Translates to: AHTESLLAVAGC*KAASGAAAPRR
Trigger: CCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp GCCTTGCCTGGGAAACAAGGGCTGCTGGGGCTGCATTaGTTGGAGACCAAGGGTCTGACTCTGGGACTGCGA +
Preference number: 6 (lower is better)
Translates to: ALPGKQGLLGLH*LETKGLTLGLR
Trigger: TCGCAGTCCCAGAGTCAGACCCTTGGTCTCCAAGCAATGCAGCCCCAGCAGCCCTTGTTTCCCAGGCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CCA 72 bp TGCTGGGGCTGCTGCATCTGTTGGAAAGGCCGAGTCTaGGCTTGCCTGAGAAGTCGCTGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CWGCCICWKGRV*ACLRSRCCCCC
Trigger: GCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGATGCAGCAGCCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488092.1
CDS CAA 90 bp CTGCTGCTGCTGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACTGTaGGAAAGGCCGAGTCTGGGCTTGCCTGAGAAGTCGCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: LLLLLGLLQALPGKL*ERPSLGLPEKSLLL
Trigger: CAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCAGCAGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CAA 90 bp AAGTGTGAAGGATGCCCATACGGAGTCACTCCTTGCTGTGGCTGGTaGCTGGAAAGCTGCTTCTGGAGCTGCCGCACCAAGGCGGCCGTC +
Preference number: 6 (lower is better)
Translates to: KCEGCPYGVTPCCGW*LESCFWSCRTKAAV
Trigger: GACGGCCGCCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCACACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp GCCGCCGCAGCCTCCATCATTCGGGTTGGGATGGGGGACTTGGATTaGATTTTATTTGTGCGGTATCTGCCTCGCCCGGACGAGCTCCGG +
Preference number: 6 (lower is better)
Translates to: AAAASIIRVGMGDLD*ILFVRYLPRPDELR
Trigger: CCGGAGCTCGTCCGGGCGAGGCAGATACCGCACAAATAAAATCAAATCCAAGTCCCCCATCCCAACCCGAATGATGGAGGCTGCGGCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469768.1
CDS GCA 72 bp CCACCTCTGGTGGCACAGGGACAGGGCCATCGCCCGTaGTGGAGGCCATGTGGTAAAAGTCAGAAATCTTGG +
Preference number: 6 (lower is better)
Translates to: PPLVAQGQGHRP*WRPCGKSQKSW
Trigger: CCAAGATTTCTGACTTTTACCACATGGCCTCCAGCACGGGCGATGGCCCTGTCCCTGTGCCACCAGAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS GCA 72 bp GATGCCCATACGGAGTCACTCCTTGCTGTGGCTGGTTaGTGGAAAGCTGCTTCTGGAGCTGCCGCACCAAGG +
Preference number: 6 (lower is better)
Translates to: DAHTESLLAVAG*WKAASGAAAPR
Trigger: CCTTGGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp GGCTGCTGCATCTGTTGGAAAGGCCGAGTCTGGGCTTaGCTGAGAAGTCGCTGTTGCTGCTGCTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: GCCICWKGRVWA*LRSRCCCCCCR
Trigger: TCTGCAGCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGATGCAGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488092.1
CDS CCA 72 bp CCTCTGGTGGCACAGGGACAGGGCCATCGCCCGTGCTaGAGGCCATGTGGTAAAAGTCAGAAATCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: PLVAQGQGHRPC*RPCGKSQKSWP
Trigger: TGGCCAAGATTTCTGACTTTTACCACATGGCCTCCAGCACGGGCGATGGCCCTGTCCCTGTGCCACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CCA 72 bp GCAGTGGCTGGAGGTAGTAACTGCGGGGCTTGGGCATaGGGTGTGTGTGATACAGCAGGAGGTGATGCTGCT +
Preference number: 6 (lower is better)
Translates to: AVAGGSNCGAWA*GVCDTAGGDAA
Trigger: AGCAGCATCACCTCCTGCTGTATCACACACACCCCATGCCCAAGCCCCGCAGTTACTACCTCCAGCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp TGCTGGGTCTGCTGCAAGCCTTGCCTGGGAAACTGTTaGAAAGGCCGAGTCTGGGCTTGCCTGAGAAGTCGC +
Preference number: 6 (lower is better)
Translates to: CWVCCKPCLGNC*KGRVWACLRSR
Trigger: GCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTTGCAGCAGACCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CCA 72 bp GAAGGATGCCCATACGGAGTCACTCCTTGCTGTGGCTaGTTGCTGGAAAGCTGCTTCTGGAGCTGCCGCACC +
Preference number: 6 (lower is better)
Translates to: EGCPYGVTPCCG*LLESCFWSCRT
Trigger: GGTGCGGCAGCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp CTATCATCATGTGGGGTGAGTGGGCAGCAAGGAGGTTaGGGCTATCGCTCAGCAGCAAGGAAAGACGCCGGG +
Preference number: 6 (lower is better)
Translates to: LSSCGVSGQQGG*GYRSAARKDAG
Trigger: CCCGGCGTCTTTCCTTGCTGCTGAGCGATAGCCCCAACCTCCTTGCTGCCCACTCACCCCACATGATGATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CAA 72 bp CCTATCATCATGTGGGGTGAGTGGGCAGCAAGGAGGTaGGGGCTATCGCTCAGCAGCAAGGAAAGACGCCGG +
Preference number: 6 (lower is better)
Translates to: PIIMWGEWAARR*GLSLSSKERRR
Trigger: CCGGCGTCTTTCCTTGCTGCTGAGCGATAGCCCCAACCTCCTTGCTGCCCACTCACCCCACATGATGATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CAA 72 bp CTGCTGCATCTGGAGGAGTCTCTGCTGCTGTCGAACTaGCGGCTGTCTGGGTCTCATGGGATCCTGAGGCAG +
Preference number: 6 (lower is better)
Translates to: LLHLEESLLLSN*RLSGSHGILRQ
Trigger: CTGCCTCAGGATCCCATGAGACCCAGACAGCCGCAAGTTCGACAGCAGCAGAGACTCCTCCAGATGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CAA 72 bp TTGCCTGGGAAACAAGGGCTGCTGGGGCTGCATTGCTaGGAGACCAAGGGTCTGACTCTGGGACTGCGAGGA +
Preference number: 6 (lower is better)
Translates to: LPGKQGLLGLHC*ETKGLTLGLRG
Trigger: TCCTCGCAGTCCCAGAGTCAGACCCTTGGTCTCCAAGCAATGCAGCCCCAGCAGCCCTTGTTTCCCAGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CAA 90 bp ACTCCGGCCGCCGCAGCCTCCATCATTCGGGTTGGGATGGGGGACTaGGATTTGATTTTATTTGTGCGGTATCTGCCTCGCCCGGACGAG +
Preference number: 6 (lower is better)
Translates to: TPAAAASIIRVGMGD*DLILFVRYLPRPDE
Trigger: CTCGTCCGGGCGAGGCAGATACCGCACAAATAAAATCAAATCCAAGTCCCCCATCCCAACCCGAATGATGGAGGCTGCGGCGGCCGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469768.1
CDS CAA 90 bp GCGCCTGAGCGCCGCTGTAGCATGTTTGACAGAGCTTGTTTGGTGTaGGTTGGGACAAAGGAGCCTGCAGGGTCCAATCTGGAGCCACCT +
Preference number: 6 (lower is better)
Translates to: APERRCSMFDRACLV*VGTKEPAGSNLEPP
Trigger: AGGTGGCTCCAGATTGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAGGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp GAGAAGGCGGCTGCATCATGGCGCCTGAGCGCCGCTGTAGCATGTTaGACAGAGCTTGTTTGGTGTTGGTTGGGACAAAGGAGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: EKAAASWRLSAAVAC*TELVWCWLGQRSLQ
Trigger: CTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAGGCGCCATGATGCAGCCGCCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS GCA 72 bp TGCCTGGGAAACTGTTGGAAAGGCCGAGTCTGGGCTTaGCTGAGAAGTCGCTGTTGCTGCTGCTGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: CLGNCWKGRVWA*LRSRCCCCCCR
Trigger: TCTGCAGCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CCA 72 bp TCGGACTGTCCCAAACCAGGCCCAGGACAAAGGAGCTaGGTTCTTCTGACCCTCAAACAAGTCCCACGGGGA +
Preference number: 6 (lower is better)
Translates to: SDCPKPGPGQRS*VLLTLKQVPRG
Trigger: TCCCCGTGGGACTTGTTTGAGGGTCAGAAGAACCCAGCTCCTTTGTCCTGGGCCTGGTTTGGGACAGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp AAGCCTTGCCTGGGAAACTGTTGGAAAGGCCGAGTCTaGGCTTGCCTGAGAAGTCGCTGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: KPCLGNCWKGRV*ACLRSRCCCCC
Trigger: GCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGACTCGGCCTTTCCAACAGTTTCCCAGGCAAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273432.8
CDS CCA 72 bp TTAGCACGGGGTTGGAATGTGCGGCCGGATAGGCTCTaGAGTTATAGCTGGGAGACAGGACCACACTGCCAG +
Preference number: 6 (lower is better)
Translates to: LARGWNVRPDRL*SYSWETGPHCQ
Trigger: CTGGCAGTGTGGTCCTGTCTCCCAGCTATAACTCCAGAGCCTATCCGGCCGCACATTCCAACCCCGTGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CCA 72 bp CATGGGATCCTGAGGCAGGGGCACGGAGGGAAGGTTTaGATGTGCAGAAGTCAGCACAGCATCAATTCCCCC +
Preference number: 6 (lower is better)
Translates to: HGILRQGHGGKV*MCRSQHSINSP
Trigger: GGGGGAATTGATGCTGTGCTGACTTCTGCACATCCAAACCTTCCCTCCGTGCCCCTGCCTCAGGATCCCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS CAA 90 bp CTGAGCGCCGCTGTAGCATGTTTGACAGAGCTTGTTTGGTGTTGGTaGGGACAAAGGAGCCTGCAGGGTCCAATCTGGAGCCACCTGGAG +
Preference number: 6 (lower is better)
Translates to: LSAAVACLTELVWCW*GQRSLQGPIWSHLE
Trigger: CTCCAGGTGGCTCCAGATTGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 72 bp GCGGCCATGATCTCTCATGTTAACCGGCGAAATGAATaGGAGTTGGAGCTGGAGCAGCCGCCTCTGAGCACC +
Preference number: 6 (lower is better)
Translates to: AAMISHVNRRNE*ELELEQPPLST
Trigger: GGTGCTCAGAGGCGGCTGCTCCAGCTCCAACTCTCATTCATTTCGCCGGTTAACATGAGAGATCATGGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309237.8
ENST00000422248.6
CDS CCA 72 bp GCCCCGATACTCGAGTTGTTTGGTCCTATCATCATGTaGGGTGAGTGGGCAGCAAGGAGGTTGGGGCTATCG +
Preference number: 6 (lower is better)
Translates to: APILELFGPIIM*GEWAARRLGLS
Trigger: CGATAGCCCCAACCTCCTTGCTGCCCACTCACCCCACATGATGATAGGACCAAACAACTCGAGTATCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CAA 72 bp CCTGAGCGCCGCTGTAGCATGTTTGACAGAGCTTGTTaGGTGTTGGTTGGGACAAAGGAGCCTGCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: PERRCSMFDRAC*VLVGTKEPAGS
Trigger: GGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS CAA 90 bp ATCATGGCGCCTGAGCGCCGCTGTAGCATGTTTGACAGAGCTTGTTaGGTGTTGGTTGGGACAAAGGAGCCTGCAGGGTCCAATCTGGAG +
Preference number: 6 (lower is better)
Translates to: IMAPERRCSMFDRAC*VLVGTKEPAGSNLE
Trigger: CTCCAGATTGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAGGCGCCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp CCTGCTGCTGCGATGTCTGCTGCAAAGGCATCTGTGTCCCATACATaGTATAGCCCTGTGGCATGGTCTGTGCTTGCTGCAGCCCTGGAT +
Preference number: 6 (lower is better)
Translates to: PAAAMSAAKASVSHT*YSPVAWSVLAAALD
Trigger: ATCCAGGGCTGCAGCAAGCACAGACCATGCCACAGGGCTATACAATGTATGGGACACAGATGCCTTTGCAGCAGACATCGCAGCAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS GCA 72 bp CAAGCTGCTGCTAGAAGAGAGGGAAGTGCGACATGCTaGACGACGTCCTCCAGGGAAAAACACTGTCGTGCT +
Preference number: 6 (lower is better)
Translates to: QAAARREGSATC*TTSSREKHCRA
Trigger: AGCACGACAGTGTTTTTCCCTGGAGGACGTCGTGCAGCATGTCGCACTTCCCTCTCTTCTAGCAGCAGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp CCACAAGCTGCTGCTAGAAGAGAGGGAAGTGCGACATaGTGCACGACGTCCTCCAGGGAAAAACACTGTCGT +
Preference number: 6 (lower is better)
Translates to: PQAAARREGSAT*CTTSSREKHCR
Trigger: ACGACAGTGTTTTTCCCTGGAGGACGTCGTGCAGCATGTCGCACTTCCCTCTCTTCTAGCAGCAGCTTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp GTCTGGGCTTGCCTGAGAAGTCGCTGTTGCTGCTGCTaGTGCAGAAGCTTCATCTGTATCAACTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: VWACLRSRCCCC*CRSFICINCCC
Trigger: GCAGCAGCAGTTGATACAGATGAAGCTTCTGCAGCAGCAGCAGCAACAGCGACTTCTCAGGCAAGCCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS GCA 72 bp CAGAAGTGTGAAGGATGCCCATACGGAGTCACTCCTTaGTGTGGCTGGTTGCTGGAAAGCTGCTTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: QKCEGCPYGVTP*CGWLLESCFWS
Trigger: GCTCCAGAAGCAGCTTTCCAGCAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCACACTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp TCATCCTCAGATGGAAATGCAGAAATCACCGTCTTCTaGGTCGCTCACGCTGGGAGCTGTAGACCGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SSSDGNAEITVF*VAHAGSCRPEL
Trigger: CAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGTGATTTCTGCATTTCCATCTGAGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491549.5
CDS CCA 72 bp CTGAGCGCCGCTGTAGCATGTTTGACAGAGCTTGTTTaGTGTTGGTTGGGACAAAGGAGCCTGCAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: LSAAVACLTELV*CWLGQRSLQGP
Trigger: TGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS CAA 72 bp GCTGCATCATGGCGCCTGAGCGCCGCTGTAGCATGTTaGACAGAGCTTGTTTGGTGTTGGTTGGGACAAAGG +
Preference number: 6 (lower is better)
Translates to: AASWRLSAAVAC*TELVWCWLGQR
Trigger: CCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCGCTCAGGCGCCATGATGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS TCA 72 bp TTCATCTGTATCAACTGCTGCTGCGATGTGATTGCATaGAGAGAAGGCGGCTGCATCATGGCGCCTGAGCGC +
Preference number: 6 (lower is better)
Translates to: FICINCCCDVIA*REGGCIMAPER
Trigger: GCGCTCAGGCGCCATGATGCAGCCGCCTTCTCTTCATGCAATCACATCGCAGCAGCAGTTGATACAGATGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS TCA 72 bp CCTCCATCATTCGGGTTGGGATGGGGGACTTGGATTTaGTTTTATTTGTGCGGTATCTGCCTCGCCCGGACG +
Preference number: 6 (lower is better)
Translates to: PPSFGLGWGTWI*FYLCGICLART
Trigger: CGTCCGGGCGAGGCAGATACCGCACAAATAAAATCAAATCCAAGTCCCCCATCCCAACCCGAATGATGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469768.1
CDS CCA 72 bp GCCGCTGTAGCATGTTTGACAGAGCTTGTTTGGTGTTaGTTGGGACAAAGGAGCCTGCAGGGTCCAATCTGG +
Preference number: 6 (lower is better)
Translates to: AAVACLTELVWC*LGQRSLQGPIW
Trigger: CCAGATTGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp CGCCGCTGTAGCATGTTTGACAGAGCTTGTTTGGTGTaGGTTGGGACAAAGGAGCCTGCAGGGTCCAATCTG +
Preference number: 6 (lower is better)
Translates to: RRCSMFDRACLV*VGTKEPAGSNL
Trigger: CAGATTGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGCGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp GCCTCCATCATTCGGGTTGGGATGGGGGACTTGGATTaGATTTTATTTGTGCGGTATCTGCCTCGCCCGGAC +
Preference number: 6 (lower is better)
Translates to: ASIIRVGMGDLD*ILFVRYLPRPD
Trigger: GTCCGGGCGAGGCAGATACCGCACAAATAAAATCAAATCCAAGTCCCCCATCCCAACCCGAATGATGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469768.1
CDS TCA 72 bp CAGGGGAAGAACATTCTGAGGGGTTTACGACATGCTTaGCCACACCACACAACCCTTCAAACACCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: QGKNILRGLRHA*PHHTTLQTPGL
Trigger: CAGCCCAGGTGTTTGAAGGGTTGTGTGGTGTGGTCAAGCATGTCGTAAACCCCTCAGAATGTTCTTCCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 72 bp GCAGAAGCTTCATCTGTATCAACTGCTGCTGCGATGTaGTTGCATGAAGAGAAGGCGGCTGCATCATGGCGC +
Preference number: 6 (lower is better)
Translates to: AEASSVSTAAAM*LHEEKAAASWR
Trigger: GCGCCATGATGCAGCCGCCTTCTCTTCATGCAATCACATCGCAGCAGCAGTTGATACAGATGAAGCTTCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000488092.1
CDS CCA 72 bp GAAATGCTAGCTTTTCGTTGTATTCCCATTGCTTCATaGCTTGCTCCACCTCTGGTGGCACAGGGACAGGGC +
Preference number: 6 (lower is better)
Translates to: EMLAFRCIPIAS*LAPPLVAQGQG
Trigger: GCCCTGTCCCTGTGCCACCAGAGGTGGAGCAAGCCATGAAGCAATGGGAATACAACGAAAAGCTAGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CCA 72 bp AGGGTACACATGTATGCGTCATGGGAGAAGACATCATaGCGGATGAACTCGCAGAAGAGCAGCACCAGGTTC +
Preference number: 6 (lower is better)
Translates to: RVHMYASWEKTS*RMNSQKSSTRF
Trigger: GAACCTGGTGCTGCTCTTCTGCGAGTTCATCCGCCATGATGTCTTCTCCCATGACGCATACATGTGTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CAA 72 bp CGACTAATAGTCACCCCTGCTGTGGATTCTTGGCACTaGTCAAATGACCACCGAACTTCCACTGCACGGCCT +
Preference number: 6 (lower is better)
Translates to: RLIVTPAVDSWH*SNDHRTSTARP
Trigger: AGGCCGTGCAGTGGAAGTTCGGTGGTCATTTGACAAGTGCCAAGAATCCACAGCAGGGGTGACTATTAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CAA 72 bp GCTGTAGCATGTTTGACAGAGCTTGTTTGGTGTTGGTaGGGACAAAGGAGCCTGCAGGGTCCAATCTGGAGC +
Preference number: 6 (lower is better)
Translates to: AVACLTELVWCW*GQRSLQGPIWS
Trigger: GCTCCAGATTGGACCCTGCAGGCTCCTTTGTCCCAACCAACACCAAACAAGCTCTGTCAAACATGCTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp GCGATGTCTGCTGCAAAGGCATCTGTGTCCCATACATaGTATAGCCCTGTGGCATGGTCTGTGCTTGCTGCA +
Preference number: 6 (lower is better)
Translates to: AMSAAKASVSHT*YSPVAWSVLAA
Trigger: TGCAGCAAGCACAGACCATGCCACAGGGCTATACAATGTATGGGACACAGATGCCTTTGCAGCAGACATCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474524.5
CDS TCA 72 bp AGTCACCCCTGCTGTGGATTCTTGGCACTTGTCAAATaGCCACCGAACTTCCACTGCACGGCCTCTTTGTTT +
Preference number: 6 (lower is better)
Translates to: SHPCCGFLALVK*PPNFHCTASLF
Trigger: AAACAAAGAGGCCGTGCAGTGGAAGTTCGGTGGTCATTTGACAAGTGCCAAGAATCCACAGCAGGGGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS GCA 72 bp TGTCTTCTCCTCTTGCAGATTCAGAAGTGTGAAGGATaGCCATACGGAGTCACTCCTTGCTGTGGCTGGTTG +
Preference number: 6 (lower is better)
Translates to: CLLLLQIQKCEG*PYGVTPCCGWL
Trigger: CAACCAGCCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCACACTTCTGAATCTGCAAGAGGAGAAGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp GAGCCAGGGTCCTTCAAGCACTGTTTGATCATTAGCTaGAGTTCTAACCAGGATTGCCTCAGTGTCCACTGC +
Preference number: 6 (lower is better)
Translates to: EPGSFKHCLIIS*SSNQDCLSVHC
Trigger: GCAGTGGACACTGAGGCAATCCTGGTTAGAACTCCAGCTAATGATCAAACAGTGCTTGAAGGACCCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp TCAGGGGAAGAACATTCTGAGGGGTTTACGACATGCTaGACCACACCACACAACCCTTCAAACACCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SGEEHSEGFTTC*TTPHNPSNTWA
Trigger: AGCCCAGGTGTTTGAAGGGTTGTGTGGTGTGGTCAAGCATGTCGTAAACCCCTCAGAATGTTCTTCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp GCCACAGAACCAGAGCCAGGGTCCTTCAAGCACTGTTaGATCATTAGCTGGAGTTCTAACCAGGATTGCCTC +
Preference number: 6 (lower is better)
Translates to: ATEPEPGSFKHC*IISWSSNQDCL
Trigger: GAGGCAATCCTGGTTAGAACTCCAGCTAATGATCAAACAGTGCTTGAAGGACCCTGGCTCTGGTTCTGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 72 bp CCACAGAACCAGAGCCAGGGTCCTTCAAGCACTGTTTaGTCATTAGCTGGAGTTCTAACCAGGATTGCCTCA +
Preference number: 6 (lower is better)
Translates to: PQNQSQGPSSTV*SLAGVLTRIAS
Trigger: TGAGGCAATCCTGGTTAGAACTCCAGCTAATGATCAAACAGTGCTTGAAGGACCCTGGCTCTGGTTCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 72 bp AACGTCATGTCTTCTCCTCTTGCAGATTCAGAAGTGTaGAGGATGCCCATACGGAGTCACTCCTTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: NVMSSPLADSEV*RMPIRSHSLLW
Trigger: CCACAGCAAGGAGTGACTCCGTATGGGCATCCTTCACACTTCTGAATCTGCAAGAGGAGAAGACATGACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp CTTTCAGGGGAAGAACATTCTGAGGGGTTTACGACATaGTTGACCACACCACACAACCCTTCAAACACCTGG +
Preference number: 6 (lower is better)
Translates to: LSGEEHSEGFTT*LTTPHNPSNTW
Trigger: CCAGGTGTTTGAAGGGTTGTGTGGTGTGGTCAAGCATGTCGTAAACCCCTCAGAATGTTCTTCCCCTGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp TCTCCTCGAGATATGAGGGTACACATGTATGCGTCATaGGAGAAGACATCATGGCGGATGAACTCGCAGAAG +
Preference number: 6 (lower is better)
Translates to: SPRDMRVHMYAS*EKTSWRMNSQK
Trigger: CTTCTGCGAGTTCATCCGCCATGATGTCTTCTCCCATGACGCATACATGTGTACCCTCATATCTCGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS TCA 72 bp ACATGTATGCGTCATGGGAGAAGACATCATGGCGGATaGACTCGCAGAAGAGCAGCACCAGGTTCACAAATT +
Preference number: 6 (lower is better)
Translates to: TCMRHGRRHHGG*TRRRAAPGSQI
Trigger: AATTTGTGAACCTGGTGCTGCTCTTCTGCGAGTTCATCCGCCATGATGTCTTCTCCCATGACGCATACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS TCA 72 bp GATCAGGATTCAAGATTAGACAACTGTGATAGCGCCTaGGAACAGCCACGATGCAGACACACAGTCCTGTTG +
Preference number: 6 (lower is better)
Translates to: DQDSRLDNCDSA*EQPRCRHTVLL
Trigger: CAACAGGACTGTGTGTCTGCATCGTGGCTGTTCTCAGGCGCTATCACAGTTGTCTAATCTTGAATCCTGATC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 72 bp AGAACAACAAAGAGCCTTCAGAACCCCCAGCCATTCTaGACTAAGAACAGTGCAGCAAGCCGTAAGCTCAGA +
Preference number: 6 (lower is better)
Translates to: RTTKSLQNPQPF*TKNSAASRKLR
Trigger: TCTGAGCTTACGGCTTGCTGCACTGTTCTTAGTTCAGAATGGCTGGGGGTTCTGAAGGCTCTTTGTTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp TTGCTTTTAAGACAGCAAACACGGCTCCCACTTCAATaGTGTTGTGAGCAGCGGCTAAGAGGTGTCTATCAC +
Preference number: 6 (lower is better)
Translates to: LLLRQQTRLPLQ*CCEQRLRGVYH
Trigger: GTGATAGACACCTCTTAGCCGCTGCTCACAACAGCATTGAAGTGGGAGCCGTGTTTGCTGTCTTAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp AAAACCCGACTAATAGTCACCCCTGCTGTGGATTCTTaGCACTTGTCAAATGACCACCGAACTTCCACTGCA +
Preference number: 6 (lower is better)
Translates to: KTRLIVTPAVDS*HLSNDHRTSTA
Trigger: TGCAGTGGAAGTTCGGTGGTCATTTGACAAGTGCCAAGAATCCACAGCAGGGGTGACTATTAGTCGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CCA 72 bp AGACACACAGTCCTGTTGTATAACTTCCTGCCAGGCTaGAGGATTTTAGGAGCAGTTCAGCTTCCACAACAC +
Preference number: 6 (lower is better)
Translates to: RHTVLLYNFLPG*RILGAVQLPQH
Trigger: GTGTTGTGGAAGCTGAACTGCTCCTAAAATCCTCCAGCCTGGCAGGAAGTTATACAACAGGACTGTGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000491549.5
CDS CAA 90 bp AGGTCTGCAGACTGCTGGAATACCTCTATTGTTGCCTTTGCAATATaGTCCAGTAAGTTGTTCATTTCGGCCACAGAACCAGAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: RSADCWNTSIVAFAI*SSKLFISATEPEPG
Trigger: CCCTGGCTCTGGTTCTGTGGCCGAAATGAACAACTTACTGGACAATATTGCAAAGGCAACAATAGAGGTATTCCAGCAGTCTGCAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp GATGCCTTGCTTCATCACGCTCTTTGCCGACTCCATAGAGAAGGATaGTGCGCTGGTTACATTCATGACTTGAAGATTCATCCAGAGGTA +
Preference number: 6 (lower is better)
Translates to: DALLHHALCRLHREG*CAGYIHDLKIHPEV
Trigger: TACCTCTGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCAAAGAGCGTGATGAAGCAAGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp TGCTGGAATACCTCTATTGTTGCCTTTGCAATATTGTCCAGTAAGTaGTTCATTTCGGCCACAGAACCAGAGCCAGGGTCCTTCAAGCAC +
Preference number: 6 (lower is better)
Translates to: CWNTSIVAFAILSSK*FISATEPEPGSFKH
Trigger: GTGCTTGAAGGACCCTGGCTCTGGTTCTGTGGCCGAAATGAACAACTTACTGGACAATATTGCAAAGGCAACAATAGAGGTATTCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp GATGCCTTGCTTCATCACGCTCTTTGCCGACTCCATAGAGAAGGATaGTGCGCTGGTTACATTCATGACTTGAAGATTCATCCTTGTCTG +
Preference number: 6 (lower is better)
Translates to: DALLHHALCRLHREG*CAGYIHDLKIHPCL
Trigger: CAGACAAGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCAAAGAGCGTGATGAAGCAAGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468305.1
CDS CAA 90 bp GATGCCTTGCTTCATCACGCTCTTTGCCGACTCCATAGAGAAGGATaGTGCGCTGGTTACATTCATGACTTGAAGATTCATCCTCAGATG +
Preference number: 6 (lower is better)
Translates to: DALLHHALCRLHREG*CAGYIHDLKIHPQM
Trigger: CATCTGAGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCAAAGAGCGTGATGAAGCAAGGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491549.5
CDS TCA 72 bp CTGGCTGAGCCATGTTCATCTCCAGTGAAGGCTGGCTaGTTATTGAAGCCTTGCTTTACATTCACAGCAGTA +
Preference number: 6 (lower is better)
Translates to: LAEPCSSPVKAG*LLKPCFTFTAV
Trigger: TACTGCTGTGAATGTAAAGCAAGGCTTCAATAATCAGCCAGCCTTCACTGGAGATGAACATGGCTCAGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000469768.1
ENST00000474524.5
CDS TCA 72 bp GAGACAAGAAACCTGTTTCAACTTGAAGACACCGTATaGGGTGAATGGACAGCCAGCCACCACAATGAAAGG +
Preference number: 6 (lower is better)
Translates to: ETRNLFQLEDTV*GEWTASHHNER
Trigger: CCTTTCATTGTGGTGGCTGGCTGTCCATTCACCTCATACGGTGTCTTCAAGTTGAAACAGGTTTCTTGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468305.1
CDS GCA 72 bp CCTCCTACCAAATTTAGGCGGAGTTGCAATGCTTCGTaGATCATCTGCCGCGCTTTTATGTCATCTTGGTAT +
Preference number: 6 (lower is better)
Translates to: PPTKFRRSCNAS*IICRAFMSSWY
Trigger: ATACCAAGATGACATAAAAGCGCGGCAGATGATGCACGAAGCATTGCAACTCCGCCTAAATTTGGTAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp GTGTCAAACATTCCTCCTACCAAATTTAGGCGGAGTTaGAATGCTTCGTGCATCATCTGCCGCGCTTTTATG +
Preference number: 6 (lower is better)
Translates to: VSNIPPTKFRRS*NASCIICRAFM
Trigger: CATAAAAGCGCGGCAGATGATGCACGAAGCATTGCAACTCCGCCTAAATTTGGTAGGAGGAATGTTTGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp ACCTCTATTGTTGCCTTTGCAATATTGTCCAGTAAGTaGTTCATTTCGGCCACAGAACCAGAGCCAGGGTCC +
Preference number: 6 (lower is better)
Translates to: TSIVAFAILSSK*FISATEPEPGS
Trigger: GGACCCTGGCTCTGGTTCTGTGGCCGAAATGAACAACTTACTGGACAATATTGCAAAGGCAACAATAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 72 bp AGTGCAAAGTACATCATTAAACCCCCACACGTGATTTaGAGAACAACAAAGAGCCTTCAGAACCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: SAKYIIKPPHVI*RTTKSLQNPQP
Trigger: TGGCTGGGGGTTCTGAAGGCTCTTTGTTGTTCTTCAAATCACGTGTGGGGGTTTAATGATGTACTTTGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp CATCACGCTCTTTGCCGACTCCATAGAGAAGGATTGTaGGCTGGTTACATTCATGACTTGAAGATTCATCCA +
Preference number: 6 (lower is better)
Translates to: HHALCRLHREGL*AGYIHDLKIHP
Trigger: TGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCAAAGAGCGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp CATCACGCTCTTTGCCGACTCCATAGAGAAGGATTGTaGGCTGGTTACATTCATGACTTGAAGATTCATCCT +
Preference number: 6 (lower is better)
Translates to: HHALCRLHREGL*AGYIHDLKIHP
Trigger: AGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCAAAGAGCGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000468305.1
ENST00000491549.5
CDS CAA 90 bp TGCCGACTCCATAGAGAAGGATTGTGCGCTGGTTACATTCATGACTaGAAGATTCATCCTCAGATGGAAATGCAGAAATCACCGTCTTCT +
Preference number: 6 (lower is better)
Translates to: CRLHREGLCAGYIHD*KIHPQMEMQKSPSS
Trigger: AGAAGACGGTGATTTCTGCATTTCCATCTGAGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491549.5
CDS TCA 72 bp TGGCTTTTCCCTCTTCACCAACTTCTCACAATTAACTaGCATTCTTCTGCCCAACGAAGTGTTGGCATTCTC +
Preference number: 6 (lower is better)
Translates to: WLFPLHQLLTIN*HSSAQRSVGIL
Trigger: GAGAATGCCAACACTTCGTTGGGCAGAAGAATGTCAGTTAATTGTGAGAAGTTGGTGAAGAGGGAAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
ENST00000480026.1
CDS TCA 72 bp TCTACAGTGCAAAGTACATCATTAAACCCCCACACGTaGTTTGAAGAACAACAAAGAGCCTTCAGAACCCCC +
Preference number: 6 (lower is better)
Translates to: STVQSTSLNPHT*FEEQQRAFRTP
Trigger: GGGGGTTCTGAAGGCTCTTTGTTGTTCTTCAAATCACGTGTGGGGGTTTAATGATGTACTTTGCACTGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp AAATTTAGGCGGAGTTGCAATGCTTCGTGCATCATCTaGCGCGCTTTTATGTCATCTTGGTATCGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: KFRRSCNASCII*RAFMSSWYRSS
Trigger: AGAAGAACGATACCAAGATGACATAAAAGCGCGGCAGATGATGCACGAAGCATTGCAACTCCGCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS GCA 72 bp TTCAGTGCAAACATAAAACGTCATGTCTTCTCCTCTTaGAGATTCAGAAGTGTGAAGGATGCCCATACGGAG +
Preference number: 6 (lower is better)
Translates to: FSANIKRHVFSS*RFRSVKDAHTE
Trigger: CTCCGTATGGGCATCCTTCACACTTCTGAATCTGCAAGAGGAGAAGACATGACGTTTTATGTTTGCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp GCTTCGTGCATCATCTGCCGCGCTTTTATGTCATCTTaGTATCGTTCTTCTCTCCAGTTACTTAAAATCTGG +
Preference number: 6 (lower is better)
Translates to: ASCIICRAFMSS*YRSSLQLLKIW
Trigger: CCAGATTTTAAGTAACTGGAGAGAAGAACGATACCAAGATGACATAAAAGCGCGGCAGATGATGCACGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp TCACAATTAACTGACATTCTTCTGCCCAACGAAGTGTaGGCATTCTCACAGGATTCTCCAGGCATAGGAGAA +
Preference number: 6 (lower is better)
Translates to: SQLTDILLPNEV*AFSQDSPGIGE
Trigger: TTCTCCTATGCCTGGAGAATCCTGTGAGAATGCCAACACTTCGTTGGGCAGAAGAATGTCAGTTAATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
ENST00000480026.1
CDS CAA 72 bp CTTCATCACGCTCTTTGCCGACTCCATAGAGAAGGATaGTGCGCTGGTTACATTCATGACTTGAAGATTCAT +
Preference number: 6 (lower is better)
Translates to: LHHALCRLHREG*CAGYIHDLKIH
Trigger: ATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATGGAGTCGGCAAAGAGCGTGATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000468305.1
ENST00000474524.5
ENST00000491549.5
CDS CAA 72 bp GGTCTGCAGACTGCTGGAATACCTCTATTGTTGCCTTaGCAATATTGTCCAGTAAGTTGTTCATTTCGGCCA +
Preference number: 6 (lower is better)
Translates to: GLQTAGIPLLLP*QYCPVSCSFRP
Trigger: TGGCCGAAATGAACAACTTACTGGACAATATTGCAAAGGCAACAATAGAGGTATTCCAGCAGTCTGCAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp CAGCTTCATCGTTGGGCGCAACCTCTTGGTTATCTTTGTTTTGGTTaGCCCAGAAAATCTTATGATAAAGTGTCTCCATGGAATTGCTGG +
Preference number: 6 (lower is better)
Translates to: QLHRWAQPLGYLCFG*PRKSYDKVSPWNCW
Trigger: CCAGCAATTCCATGGAGACACTTTATCATAAGATTTTCTGGGCAAACCAAAACAAAGATAACCAAGAGGTTGCGCCCAACGATGAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CAA 90 bp TGTCCACTGCTCAAGATTCTGAAGAATACGCTTAATGTGCTGTCTTaGCAGATTGTCCCCCTCGGTACATTCTTTAATGCCATGAGGATA +
Preference number: 6 (lower is better)
Translates to: CPLLKILKNTLNVLS*QIVPLGTFFNAMRI
Trigger: TATCCTCATGGCATTAAAGAATGTACCGAGGGGGACAATCTGCAAAGACAGCACATTAAGCGTATTCTTCAGAATCTTGAGCAGTGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 72 bp AGAATTTTCAGGATATCTTTGGTAATCTTCTTCAGCTaGTGCCTTGCTTCATCACGCTCTTTGCCGACTCCA +
Preference number: 6 (lower is better)
Translates to: RIFRISLVIFFS*CLASSRSLPTP
Trigger: TGGAGTCGGCAAAGAGCGTGATGAAGCAAGGCATCAGCTGAAGAAGATTACCAAAGATATCCTGAAAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000468305.1
ENST00000474524.5
ENST00000491549.5
CDS CAA 72 bp CTCAAGATTCTGAAGAATACGCTTAATGTGCTGTCTTaGCAGATTGTCCCCCTCGGTACATTCTTTAATGCC +
Preference number: 6 (lower is better)
Translates to: LKILKNTLNVLS*QIVPLGTFFNA
Trigger: GGCATTAAAGAATGTACCGAGGGGGACAATCTGCAAAGACAGCACATTAAGCGTATTCTTCAGAATCTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp GACTGCTGGAATACCTCTATTGTTGCCTTTGCAATATaGTCCAGTAAGTTGTTCATTTCGGCCACAGAACCA +
Preference number: 6 (lower is better)
Translates to: DCWNTSIVAFAI*SSKLFISATEP
Trigger: TGGTTCTGTGGCCGAAATGAACAACTTACTGGACAATATTGCAAAGGCAACAATAGAGGTATTCCAGCAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp TTTCAGTGCAAACATAAAACGTCATGTCTTCTCCTCTaGCAGATTCAGAAGTGTGAAGGATGCCCATACGGA +
Preference number: 6 (lower is better)
Translates to: FQCKHKTSCLLL*QIQKCEGCPYG
Trigger: TCCGTATGGGCATCCTTCACACTTCTGAATCTGCAAGAGGAGAAGACATGACGTTTTATGTTTGCACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp CATAGAGAAGGATTGTGCGCTGGTTACATTCATGACTaGAAGATTCATCCTTGTCTGGTAGGGGAGATGTTT +
Preference number: 6 (lower is better)
Translates to: HREGLCAGYIHD*KIHPCLVGEMF
Trigger: AAACATCTCCCCTACCAGACAAGGATGAATCTTCAAGTCATGAATGTAACCAGCGCACAATCCTTCTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468305.1
CDS CCA 72 bp TCTCGTGCTACTTGTATCAGCACTTCCAATACTGTTTaGGTTGAAGAGGCTCATGCCAGAATTAGAAGAATT +
Preference number: 6 (lower is better)
Translates to: SRATCISTSNTV*VEEAHARIRRI
Trigger: AATTCTTCTAATTCTGGCATGAGCCTCTTCAACCCAAACAGTATTGGAAGTGCTGATACAAGTAGCACGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp ATTTTCATTTGTGGAATAATTCCACACCAAGGCACTTaGGCAACAGAGAGTGACAGTCTGCAACATACAACT +
Preference number: 6 (lower is better)
Translates to: IFICGIIPHQGT*ATESDSLQHTT
Trigger: AGTTGTATGTTGCAGACTGTCACTCTCTGTTGCCCAAGTGCCTTGGTGTGGAATTATTCCACAAATGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CAA 90 bp CTCTTAAATTGGCAGTTTCTATGGAAATGCTTTTCCCACAGGATTTaGGATTTTGTGAGGCAGTCCAGATATCATCAGCATTCCCATCAC +
Preference number: 6 (lower is better)
Translates to: LLNWQFLWKCFSHRI*DFVRQSRYHQHSHH
Trigger: GTGATGGGAATGCTGATGATATCTGGACTGCCTCACAAAATCCAAAATCCTGTGGGAAAAGCATTTCCATAGAAACTGCCAATTTAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp AATTATTTAGGTCTGCAGACTGCTGGAATACCTCTATTGTTGCCTTaGCAATATTGTCCAGTAAGTTGTTCATTTCGGCCACAGAACCAG +
Preference number: 6 (lower is better)
Translates to: NYLGLQTAGIPLLLP*QYCPVSCSFRPQNQ
Trigger: CTGGTTCTGTGGCCGAAATGAACAACTTACTGGACAATATTGCAAAGGCAACAATAGAGGTATTCCAGCAGTCTGCAGACCTAAATAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 90 bp TTCTGTCTCGTGCTACTTGTATCAGCACTTCCAATACTGTTTGGGTaGAAGAGGCTCATGCCAGAATTAGAAGAATTATTTAGGTCTGCA +
Preference number: 6 (lower is better)
Translates to: FCLVLLVSALPILFG*KRLMPELEELFRSA
Trigger: TGCAGACCTAAATAATTCTTCTAATTCTGGCATGAGCCTCTTCAACCCAAACAGTATTGGAAGTGCTGATACAAGTAGCACGAGACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS TCA 72 bp GATATCTGTGTCCACTCCAAATTCGGATCAGGAGCCTaGCGTTTCTTAATTTTAGCTTCAGATATAGCAGAA +
Preference number: 6 (lower is better)
Translates to: DICVHSKFGSGA*RFLILASDIAE
Trigger: TTCTGCTATATCTGAAGCTAAAATTAAGAAACGTCAGGCTCCTGATCCGAATTTGGAGTGGACACAGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS TCA 72 bp ACTCTTGTCTACTTCATCAAAAATGTTAGTGGTTCCTaGGTCAATGCCCATATGCGCCATAATACTCTGTTC +
Preference number: 6 (lower is better)
Translates to: TLVYFIKNVSGS*VNAHMRHNTLF
Trigger: GAACAGAGTATTATGGCGCATATGGGCATTGACTCAGGAACCACTAACATTTTTGATGAAGTAGACAAGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000309237.8
CDS CAA 72 bp TCATTTAGTAACTGTATTGCGAAGTCAATTAGTCCGTaGATGTTCAGTGCTGGCTCCATGAGATCAAAGATG +
Preference number: 6 (lower is better)
Translates to: SFSNCIAKSISP*MFSAGSMRSKM
Trigger: CATCTTTGATCTCATGGAGCCAGCACTGAACATCAACGGACTAATTGACTTCGCAATACAGTTACTAAATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000491549.5
CDS TCA 72 bp AGAAATCTGAGATGTCACTTGATGTTGATCAAAATATaGAAGGAGCTGGAGTTTAGTGAACACAGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: RNLRCHLMLIKI*KELEFSEHSLQ
Trigger: CTGGAGACTGTGTTCACTAAACTCCAGCTCCTTTCATATTTTGATCAACATCAAGTGACATCTCAGATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273432.8
ENST00000474524.5
ENST00000491549.5
CDS CCA 72 bp CCAGAATTAGAAGAATTATTTAGGTCTGCAGACTGCTaGAATACCTCTATTGTTGCCTTTGCAATATTGTCC +
Preference number: 6 (lower is better)
Translates to: PELEELFRSADC*NTSIVAFAILS
Trigger: GGACAATATTGCAAAGGCAACAATAGAGGTATTCCAGCAGTCTGCAGACCTAAATAATTCTTCTAATTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp GTGCTACTTGTATCAGCACTTCCAATACTGTTTGGGTaGAAGAGGCTCATGCCAGAATTAGAAGAATTATTT +
Preference number: 6 (lower is better)
Translates to: VLLVSALPILFG*KRLMPELEELF
Trigger: AAATAATTCTTCTAATTCTGGCATGAGCCTCTTCAACCCAAACAGTATTGGAAGTGCTGATACAAGTAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CCA 72 bp AGTAACCAGCCAATAATTATCTTTAGCATTAACTTGTaGTTTCTTCTTTCCCGTGTCCTGGAAAGTGTTAAG +
Preference number: 6 (lower is better)
Translates to: SNQPIIIFSINL*FLLSRVLESVK
Trigger: CTTAACACTTTCCAGGACACGGGAAAGAAGAAACCACAAGTTAATGCTAAAGATAATTATTGGCTGGTTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000469768.1
ENST00000474524.5
CDS CCA 72 bp AGAAAATCTTATGATAAAGTGTCTCCATGGAATTGCTaGAATCAGTTCGGTCAAAACAGTGACGATCCAAAA +
Preference number: 6 (lower is better)
Translates to: RKSYDKVSPWNC*NQFGQNSDDPK
Trigger: TTTTGGATCGTCACTGTTTTGACCGAACTGATTCCAGCAATTCCATGGAGACACTTTATCATAAGATTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000273432.8
ENST00000309237.8
ENST00000422248.6
ENST00000474524.5
CDS CCA 72 bp GCTATCAGAATAGCAATGAAAGTAGCTAATGAATCATaGAATGAAAGGTCACTCACATCTACAGTGCAAAGT +
Preference number: 6 (lower is better)
Translates to: AIRIAMKVANES*NERSLTSTVQS
Trigger: ACTTTGCACTGTAGATGTGAGTGACCTTTCATTCCATGATTCATTAGCTACTTTCATTGCTATTCTGATAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp GTGAAGTCATCATTCTTTAAAGAGCTGACACTGTTATaGCCAATTTTGGCATCTCCAAGCATCATAATTGCT +
Preference number: 6 (lower is better)
Translates to: VKSSFFKELTLL*PILASPSIIIA
Trigger: AGCAATTATGATGCTTGGAGATGCCAAAATTGGCAATAACAGTGTCAGCTCTTTAAAGAATGATGACTTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5
CDS CAA 72 bp ATAGTCCTCAGTACATATCTAGCGTATTCTCTTAAATaGGCAGTTTCTATGGAAATGCTTTTCCCACAGGAT +
Preference number: 6 (lower is better)
Translates to: IVLSTYLAYSLK*AVSMEMLFPQD
Trigger: ATCCTGTGGGAAAAGCATTTCCATAGAAACTGCCAATTTAAGAGAATACGCTAGATATGTACTGAGGACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273432.8
ENST00000474524.5