RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED12 (Homo sapiens)

Ensembl gene IDs: ENSG00000184634

Ensembl transcript IDs: ENST00000333646.10, ENST00000374080.8, ENST00000374102.5, ENST00000429213.2, ENST00000444034.1, ENST00000460771.1, ENST00000462984.1, ENST00000471663.5, ENST00000489199.1

Found 188 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TCAGGGGCCGGTGTTCGTAGCTCAAGATCCCGAAGGCCGCCATCTTaGCCAGCCCGTAGCGCCGGAGGCACCAGCAGGGCCAGGCTGACT +
Preference number: 5 (lower is better)
Translates to: SGAGVRSSRSRRPPS*PARSAGGTSRARLT
Trigger: AGTCAGCCTGGCCCTGCTGGTGCCTCCGGCGCTACGGGCTGGGCAAGATGGCGGCCTTCGGGATCTTGAGCTACGAACACCGGCCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp TGCTGCTGCTGCTGTTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTaGTCAGGTAGGATGGCTGTTGAACGGACGCCTGCCTGGACGCCC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*SGRMAVERTPAWTP
Trigger: GGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp GCGGCCGAGAGACAACAAGGGGGCACGTTAGAAACTCTCGACCATTaGCGGAAACTACCGAGGGAAGCCGAGGTACGCCGGGAACCATCG +
Preference number: 5 (lower is better)
Translates to: AAERQQGGTLETLDH*RKLPREAEVRREPS
Trigger: CGATGGTTCCCGGCGTACCTCGGCTTCCCTCGGTAGTTTCCGGCAATGGTCGAGAGTTTCTAACGTGCCCCCTTGTTGTCTCTCGGCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333646.10
CDS GCA 90 bp TGCTGCTGCTGCTGCTGTTGCTGTTGCTGCTGTTGCTGCTGCTGCTaGTGCTCAGGTAGGATGGCTGTTGAACGGACGCCTGCCTGGACG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CSGRMAVERTPAWT
Trigger: CGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAGCAGCAGCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp AACACGGCTCCATCCACGATGCGGTTCTGGGAGGCAGCCAGCAGGTaGCGGTCGCAGGAGGAGCGGATTCCTACTGTAGGCTTGTTTCCA +
Preference number: 5 (lower is better)
Translates to: NTAPSTMRFWEAASR*RSQEERIPTVGLFP
Trigger: TGGAAACAAGCCTACAGTAGGAATCCGCTCCTCCTGCGACCGCCACCTGCTGGCTGCCTCCCAGAACCGCATCGTGGATGGAGCCGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000460771.1
CDS CCA 90 bp GTTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTGCTCAGGTAGGATaGCTGTTGAACGGACGCCTGCCTGGACGCCCTGGGCACTCATTG +
Preference number: 5 (lower is better)
Translates to: VAVAAVAAAAAAQVG*LLNGRLPGRPGHSL
Trigger: CAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp TGCTGTTGCTGCTGCTGCTGCTGTTGCTGTTGCTGCTGTTGCTGCTaGTGCTGCTGCTCAGGTAGGATGGCTGTTGAACGGACGCCTGCC +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCSGRMAVERTPA
Trigger: GGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAGCAGCAGCAACAGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp GTTGGCAGATGCTGCGCAGCACGTACTTGGCATAGACATCCAGACTaGCTGTCTCCACAGAGATGTTGCGGCCACCCTGCCTCCGACCAC +
Preference number: 5 (lower is better)
Translates to: VGRCCAARTWHRHPD*LSPQRCCGHPASDH
Trigger: GTGGTCGGAGGCAGGGTGGCCGCAACATCTCTGTGGAGACAGCCAGTCTGGATGTCTATGCCAAGTACGTGCTGCGCAGCATCTGCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000460771.1
CDS CCA 90 bp TCACACGTGATGACATCTCGGGTCTGCTTGGGCAGTGGCAGCAGCTaGCGAACCTTTTCCAGACTGTCTGACTGGCGCTCCCCCAACTCC +
Preference number: 5 (lower is better)
Translates to: SHVMTSRVCLGSGSS*RTFSRLSDWRSPNS
Trigger: GGAGTTGGGGGAGCGCCAGTCAGACAGTCTGGAAAAGGTTCGCCAGCTGCTGCCACTGCCCAAGCAGACCCGAGATGTCATCACGTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp CGCCAGTCATGGTTGTGGGCAGCACTCCAGGGTAAGTTGGTCGGGTaGGCAGCTTCTGCATTGGTAAGCGCACAGGACGGTATGGGTCCA +
Preference number: 5 (lower is better)
Translates to: RQSWLWAALQGKLVG*AASALVSAQDGMGP
Trigger: TGGACCCATACCGTCCTGTGCGCTTACCAATGCAGAAGCTGCCCACCCGACCAACTTACCCTGGAGTGCTGCCCACAACCATGACTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS TCA 90 bp CTGCTTGGGCAGTGGCAGCAGCTGGCGAACCTTTTCCAGACTGTCTaGCTGGCGCTCCCCCAACTCCTTCTGCAACTTCTTCGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: LLGQWQQLANLFQTV*LALPQLLLQLLRQV
Trigger: AACCTGGCGAAGAAGTTGCAGAAGGAGTTGGGGGAGCGCCAGTCAGACAGTCTGGAAAAGGTTCGCCAGCTGCTGCCACTGCCCAAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 90 bp GGGAAGAGGGTGGGCCCCACAGATATAGGCGGGGAGCAAGCCTGCTaGGGAAGAGGGCCCACTCTTGGTAACACAACAGTATGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: GKRVGPTDIGGEQAC*GRGPTLGNTTVCGG
Trigger: TCCTCCACATACTGTTGTGTTACCAAGAGTGGGCCCTCTTCCTCAGCAGGCTTGCTCCCCGCCTATATCTGTGGGGCCCACCCTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462984.1
CDS CCA 90 bp CCGCAACTTTGCACGGACCTGCTGAGTGAAGGCACTGTTACCCTCTaGCATGGGCAGGTTGGACGGGGCAATAGGCAAGTGGTCAAGTGG +
Preference number: 5 (lower is better)
Translates to: PQLCTDLLSEGTVTL*HGQVGRGNRQVVKW
Trigger: CCACTTGACCACTTGCCTATTGCCCCGTCCAACCTGCCCATGCCAGAGGGTAACAGTGCCTTCACTCAGCAGGTCCGTGCAAAGTTGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp TCGATAAGGGAGCCCTGTGGCTCACACGTGATGACATCTCGGGTCTaGTTGGGCAGTGGCAGCAGCTGGCGAACCTTTTCCAGACTGTCT +
Preference number: 5 (lower is better)
Translates to: SIREPCGSHVMTSRV*LGSGSSWRTFSRLS
Trigger: AGACAGTCTGGAAAAGGTTCGCCAGCTGCTGCCACTGCCCAAGCAGACCCGAGATGTCATCACGTGTGAGCCACAGGGCTCCCTTATCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp TGTTGCTGTTGCTGCTGCTGCTGCTGTTGCTGTTGCTGCTGTTGCTaGTGCTGCTGCTGCTCAGGTAGGATGGCTGTTGAACGGACGCCT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCSGRMAVERTP
Trigger: AGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAGCAGCAGCAACAGCAACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp TGCTGTTGCTGTTGCTGCTGCTGCTGCTGTTGCTGTTGCTGCTGTTaGTGCTGCTGCTGCTGCTCAGGTAGGATGGCTGTTGAACGGACG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCSGRMAVERT
Trigger: CGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAGCAGCAGCAACAGCAACAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp TGGCTGGGTATTAGAGAGCTGTTGTTGAAGTTGCCGGACCAAAGCTaGTGTCTGTTGCTGCTGCTGGGTCTGCTGAAGCCCCTGGCGCTG +
Preference number: 5 (lower is better)
Translates to: WLGIRELLLKLPDQS*CLLLLLGLLKPLAL
Trigger: CAGCGCCAGGGGCTTCAGCAGACCCAGCAGCAGCAACAGACAGCAGCTTTGGTCCGGCAACTTCAACAACAGCTCTCTAATACCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp GTGGCTGGTCGTAAAGAACCCCAAGGGTCCCTTCAATCTTCTCCTTaGGTGGGGGCTTCACCTCCTTCTCGACATCTGGCTTCTCAGGGG +
Preference number: 5 (lower is better)
Translates to: VAGRKEPQGSLQSSP*VGASPPSRHLASQG
Trigger: CCCCTGAGAAGCCAGATGTCGAGAAGGAGGTGAAGCCCCCACCCAAGGAGAAGATTGAAGGGACCCTTGGGGTTCTTTACGACCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp TGCTCAGGTAGGATGGCTGTTGAACGGACGCCTGCCTGGACGCCCTaGGCACTCATTGGAGTCATGGTACTTATCATGGGTGTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CSGRMAVERTPAWTP*ALIGVMVLIMGVCC
Trigger: GCAGCAGACACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS CCA 90 bp TGCTGCTGCTGCTCAGGTAGGATGGCTGTTGAACGGACGCCTGCCTaGACGCCCTGGGCACTCATTGGAGTCATGGTACTTATCATGGGT +
Preference number: 5 (lower is better)
Translates to: CCCCSGRMAVERTPA*TPWALIGVMVLIMG
Trigger: ACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS TCA 90 bp GCTGCACCAGAGGCAAGTGGTATGACATGCCAAGGGCAAAGCTCGTaGTCTGCTCCAGAACATTCCGGGAGACCTGATAAGGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: AAPEASGMTCQGQSS*SAPEHSGRPDKGSG
Trigger: CCCACTGCCCTTATCAGGTCTCCCGGAATGTTCTGGAGCAGATCACGAGCTTTGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471663.5
CDS GCA 90 bp TCACTTCGAGGGTCCGTCAGCATGGGAGCCTGTGTATCCAGAAACTaGAGGAGGACATCCTGGAAAATGGGAGCACTGGGAGCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: SLRGSVSMGACVSRN*RRTSWKMGALGAER
Trigger: CCTTTCTGCTCCCAGTGCTCCCATTTTCCAGGATGTCCTCCTGCAGTTTCTGGATACACAGGCTCCCATGCTGACGGACCCTCGAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp AGCTGCATGAGGCGCTGCGCCTGGGCACTACTCAACACTGGGTCTTaGAGGTCATTGCTGTCCTCACACAGAGACTTAAGGCAACGTTCT +
Preference number: 5 (lower is better)
Translates to: SCMRRCAWALLNTGS*RSLLSSHRDLRQRS
Trigger: AGAACGTTGCCTTAAGTCTCTGTGTGAGGACAGCAATGACCTGCAAGACCCAGTGTTGAGTAGTGCCCAGGCGCAGCGCCTCATGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp GTTCTCCTACCCATTCCTGTTGGCAGATGCTGCGCAGCACGTACTTaGCATAGACATCCAGACTGGCTGTCTCCACAGAGATGTTGCGGC +
Preference number: 5 (lower is better)
Translates to: VLLPIPVGRCCAART*HRHPDWLSPQRCCG
Trigger: GCCGCAACATCTCTGTGGAGACAGCCAGTCTGGATGTCTATGCCAAGTACGTGCTGCGCAGCATCTGCCAACAGGAATGGGTAGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp TTGAACGGACGCCTGCCTGGACGCCCTGGGCACTCATTGGAGTCATaGTACTTATCATGGGTGTCTGCTGCAGTGTCTGGTGTGAAAACC +
Preference number: 5 (lower is better)
Translates to: LNGRLPGRPGHSLES*YLSWVSAAVSGVKT
Trigger: GGTTTTCACACCAGACACTGCAGCAGACACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS TCA 90 bp ATTTATCGAAAGACCAGCGAACTTCAACTGCCTGTCCCCGCTCCTTaGTCTGCTGCTCGATCTCCCGCAACTTTGCACGGACCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: IYRKTSELQLPVPAP*SAARSPATLHGPAE
Trigger: CTCAGCAGGTCCGTGCAAAGTTGCGGGAGATCGAGCAGCAGATCAAGGAGCGGGGACAGGCAGTTGAAGTTCGCTGGTCTTTCGATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 90 bp GCTGCCGGTACACAGAGGTCTTATAAGAGGAGGGTTCTAAACCCATaGCGCCAGTCATGGTTGTGGGCAGCACTCCAGGGTAAGTTGGTC +
Preference number: 5 (lower is better)
Translates to: AAGTQRSYKRRVLNP*RQSWLWAALQGKLV
Trigger: GACCAACTTACCCTGGAGTGCTGCCCACAACCATGACTGGCGTCATGGGTTTAGAACCCTCCTCTTATAAGACCTCTGTGTACCGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS GCA 90 bp AAACATGAACATGGCCAGCTTCTCGGTGTAATCCCACTGCCGGATTaGCACCTCTACATCATGGGGCAAGGGCCCTATCGTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: KHEHGQLLGVIPLPD*HLYIMGQGPYRGTT
Trigger: TGTGGTTCCACGATAGGGCCCTTGCCCCATGATGTAGAGGTGGCAATCCGGCAGTGGGATTACACCGAGAAGCTGGCCATGTTCATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp ACAGGAGGTGTACAGATCATAGAGATAAGCAAGGATACAGCGCTCTaGAGAGGAGCCATCGGACCGGTTCATCCCATGCTTCACGACGCC +
Preference number: 5 (lower is better)
Translates to: TGGVQIIEISKDTAL*RGAIGPVHPMLHDA
Trigger: GGCGTCGTGAAGCATGGGATGAACCGGTCCGATGGCTCCTCTGCAGAGCGCTGTATCCTTGCTTATCTCTATGATCTGTACACCTCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
CDS CCA 90 bp CTGTTACCCTCTGGCATGGGCAGGTTGGACGGGGCAATAGGCAAGTaGTCAAGTGGTGAGCCGGTCTTAATTCTGCTATCAGTCAGTGAG +
Preference number: 5 (lower is better)
Translates to: LLPSGMGRLDGAIGK*SSGEPVLILLSVSE
Trigger: CTCACTGACTGATAGCAGAATTAAGACCGGCTCACCACTTGACCACTTGCCTATTGCCCCGTCCAACCTGCCCATGCCAGAGGGTAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp TATGGAGCCTTGCCTGTAGTTAAGGTGTGTTATAGAACCAGGGTTTaGGTGGTGCAGGAGGTCCGGAGGCACTGTCACACCATAAGGGCC +
Preference number: 5 (lower is better)
Translates to: YGALPVVKVCYRTRV*VVQEVRRHCHTIRA
Trigger: GGCCCTTATGGTGTGACAGTGCCTCCGGACCTCCTGCACCACCCAAACCCTGGTTCTATAACACACCTTAACTACAGGCAAGGCTCCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS TCA 90 bp GAGGTCGAAGATGAACTGCACATGCTGCACCAGAGGCAAGTGGTATaGCATGCCAAGGGCAAAGCTCGTGATCTGCTCCAGAACATTCCG +
Preference number: 5 (lower is better)
Translates to: EVEDELHMLHQRQVV*HAKGKARDLLQNIP
Trigger: CGGAATGTTCTGGAGCAGATCACGAGCTTTGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000471663.5
CDS GCA 90 bp TGCAGTAGCTTCCTGGCATTTATCGAAAGACCAGCGAACTTCAACTaGCTGTCCCCGCTCCTTGATCTGCTGCTCGATCTCCCGCAACTT +
Preference number: 5 (lower is better)
Translates to: CSSFLAFIERPANFN*LSPLLDLLLDLPQL
Trigger: AAGTTGCGGGAGATCGAGCAGCAGATCAAGGAGCGGGGACAGGCAGTTGAAGTTCGCTGGTCTTTCGATAAATGCCAGGAAGCTACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp ATATCCTTGGTGATTTTCTTGATGGCATGGCGGGCATCATCTCGCTaGTTTCCCACCCCAAACAGTACGACCAACCGCTGGTTGCACTCA +
Preference number: 5 (lower is better)
Translates to: ISLVIFLMAWRASSR*FPTPNSTTNRWLHS
Trigger: TGAGTGCAACCAGCGGTTGGTCGTACTGTTTGGGGTGGGAAAGCAGCGAGATGATGCCCGCCATGCCATCAAGAAAATCACCAAGGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp AAGAGGGAGTTCATCTCATTGTTAGGGGTCTGCTTGATCATGAGCTaGAGCTCCAAGGAAGACTGGCGCATGGTCCACTGGTCCAAGTTC +
Preference number: 5 (lower is better)
Translates to: KREFISLLGVCLIMS*SSKEDWRMVHWSKF
Trigger: GAACTTGGACCAGTGGACCATGCGCCAGTCTTCCTTGGAGCTGCAGCTCATGATCAAGCAGACCCCTAACAATGAGATGAACTCCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp GCGCTCCCCCAACTCCTTCTGCAACTTCTTCGCCAGGTTCATGTATaGACGCTTGTTTTCCTCCATGCTACCTTGCGAGATGCTAGACAT +
Preference number: 5 (lower is better)
Translates to: ALPQLLLQLLRQVHV*TLVFLHATLRDARH
Trigger: ATGTCTAGCATCTCGCAAGGTAGCATGGAGGAAAACAAGCGTGCATACATGAACCTGGCGAAGAAGTTGCAGAAGGAGTTGGGGGAGCGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp GGCTTGGTGCCAGCCAAGTCAGTGAACCAAGTGTTAATGGCACTCTaGGATCGTGCAGTCACCAGCCAGAAGTTATCCTTCTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: GLVPAKSVNQVLMAL*DRAVTSQKLSFWFT
Trigger: AGTGAACCAGAAGGATAACTTCTGGCTGGTGACTGCACGATCCCAGAGTGCCATTAACACTTGGTTCACTGACTTGGCTGGCACCAAGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS CCA 90 bp TCCATGAGGTCGAAGATGAACTGCACATGCTGCACCAGAGGCAAGTaGTATGACATGCCAAGGGCAAAGCTCGTGATCTGCTCCAGAACA +
Preference number: 5 (lower is better)
Translates to: SMRSKMNCTCCTRGK*YDMPRAKLVICSRT
Trigger: TGTTCTGGAGCAGATCACGAGCTTTGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGACCTCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000471663.5
CDS GCA 90 bp AGGCCACTGATGCTGAGTGAATATTCCATGAGGTCGAAGATGAACTaGACATGCTGCACCAGAGGCAAGTGGTATGACATGCCAAGGGCA +
Preference number: 5 (lower is better)
Translates to: RPLMLSEYSMRSKMN*TCCTRGKWYDMPRA
Trigger: TGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGACCTCATGGAATATTCACTCAGCATCAGTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
ENST00000471663.5
CDS GCA 90 bp GGCTCAATAGGGACATGCTCTTCTGCTTTTGTCGATCACGTTCTTTaGGTGAAGAGGAACCCAGGTGCTGACCCTTCTCCAATTCTTCCC +
Preference number: 5 (lower is better)
Translates to: GSIGTCSSAFVDHVL*VKRNPGADPSPILP
Trigger: GGGAAGAATTGGAGAAGGGTCAGCACCTGGGTTCCTCTTCACGCAAAGAACGTGATCGACAAAAGCAGAAGAGCATGTCCCTATTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp ACGCTTGTTTTCCTCCATGCTACCTTGCGAGATGCTAGACATGTCTaGAGCCAATGTCCCATTGATGAGCACGCTCAGCATGTCCAACAC +
Preference number: 5 (lower is better)
Translates to: TLVFLHATLRDARHV*SQCPIDEHAQHVQH
Trigger: GTGTTGGACATGCTGAGCGTGCTCATCAATGGGACATTGGCTGCAGACATGTCTAGCATCTCGCAAGGTAGCATGGAGGAAAACAAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp TTGCTTGCAGTACTTCCAGAAGATGACCCTGTCTCTGCTGACTGTTaGAAAACCTCGATTGTGGCCTTGGCGATGTTCTCCAAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LLAVLPEDDPVSADC*KTSIVALAMFSKRE
Trigger: CTCCCTCTTGGAGAACATCGCCAAGGCCACAATCGAGGTTTTCCAACAGTCAGCAGAGACAGGGTCATCTTCTGGAAGTACTGCAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp ATGCTGAGTGAATATTCCATGAGGTCGAAGATGAACTGCACATGCTaGACCAGAGGCAAGTGGTATGACATGCCAAGGGCAAAGCTCGTG +
Preference number: 5 (lower is better)
Translates to: MLSEYSMRSKMNCTC*TRGKWYDMPRAKLV
Trigger: CACGAGCTTTGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGACCTCATGGAATATTCACTCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000471663.5
CDS GCA 90 bp CTGATGCTGAGTGAATATTCCATGAGGTCGAAGATGAACTGCACATaGTGCACCAGAGGCAAGTGGTATGACATGCCAAGGGCAAAGCTC +
Preference number: 5 (lower is better)
Translates to: LMLSEYSMRSKMNCT*CTRGKWYDMPRAKL
Trigger: GAGCTTTGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGACCTCATGGAATATTCACTCAGCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000471663.5
CDS GCA 90 bp TCATCCTGCCCTTTCAGACATGTTAGCACCAGCGATAAGAAGGGCTaGTGGCTCAATAGGGACATGCTCTTCTGCTTTTGTCGATCACGT +
Preference number: 5 (lower is better)
Translates to: SSCPFRHVSTSDKKG*WLNRDMLFCFCRSR
Trigger: ACGTGATCGACAAAAGCAGAAGAGCATGTCCCTATTGAGCCAGCAGCCCTTCTTATCGCTGGTGCTAACATGTCTGAAAGGGCAGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 90 bp CTGACGTTCTTGGCACTGCCATGCTCATCCCCAGAGACAGCAGGCTaGTTATTGAAACCTTGTTTTACATTCAAGGCCGTCAGTTCATCC +
Preference number: 5 (lower is better)
Translates to: LTFLALPCSSPETAG*LLKPCFTFKAVSSS
Trigger: GGATGAACTGACGGCCTTGAATGTAAAACAAGGTTTCAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCAGTGCCAAGAACGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS TCA 90 bp TCTTGGCACTGCCATGCTCATCCCCAGAGACAGCAGGCTGGTTATTaGAACCTTGTTTTACATTCAAGGCCGTCAGTTCATCCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: SWHCHAHPQRQQAGY*NLVLHSRPSVHPPS
Trigger: AGAAGGAGGATGAACTGACGGCCTTGAATGTAAAACAAGGTTTCAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCAGTGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 90 bp AAGTCAGAGCGTTCAAAACTATGGCTGTCCAGCACTTCCAAAGTATaGAGTACCCGTCCAATGGTGAAGCCTGCAGTAGCTTCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: KSERSKLWLSSTSKV*STRPMVKPAVASWH
Trigger: ATGCCAGGAAGCTACTGCAGGCTTCACCATTGGACGGGTACTTCATACTTTGGAAGTGCTGGACAGCCATAGTTTTGAACGCTCTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 90 bp AACATTCCGGGAGACCTGAGCCGTGACCTGGTGTTGGTCATAATGTaGAAGGTGCTGGAACTTAGCAAAGATATCTTCAGCAGTGGGGAA +
Preference number: 5 (lower is better)
Translates to: NIPGDLSRDLVLVIM*KVLELSKDIFSSGE
Trigger: TTCCCCACTGCTGAAGATATCTTTGCTAAGTTCCAGCACCTTTCACATTATGACCAACACCAGGTCACGGCTCAGGTCTCCCGGAATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 90 bp ATTCAGCAGCTGAATGGCAAAGTCGATGAGGCCACTGATGCTGAGTaGATATTCCATGAGGTCGAAGATGAACTGCACATGCTGCACCAG +
Preference number: 5 (lower is better)
Translates to: IQQLNGKVDEATDAE*IFHEVEDELHMLHQ
Trigger: CTGGTGCAGCATGTGCAGTTCATCTTCGACCTCATGGAATATTCACTCAGCATCAGTGGCCTCATCGACTTTGCCATTCAGCTGCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
ENST00000471663.5
CDS GCA 90 bp GAACTGATCTTGGCAGGATTGAAGCTGACGTTCTTGGCACTGCCATaGTCATCCCCAGAGACAGCAGGCTGGTTATTGAAACCTTGTTTT +
Preference number: 5 (lower is better)
Translates to: ELILAGLKLTFLALP*SSPETAGWLLKPCF
Trigger: AAAACAAGGTTTCAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCAGTGCCAAGAACGTCAGCTTCAATCCTGCCAAGATCAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS GCA 90 bp CAGTCACCAGCCAGAAGTTATCCTTCTGGTTCACTTGGGGCTTCCTaGGACCAGTGTCAGGAAGGGTATTACAACGTAATTTCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: QSPARSYPSGSLGAS*DQCQEGYYNVISLQ
Trigger: TTGCAGAGAAATTACGTTGTAATACCCTTCCTGACACTGGTCGCAGGAAGCCCCAAGTGAACCAGAAGGATAACTTCTGGCTGGTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS GCA 90 bp GAAAGGGTCAACATGTCTCTTCTTAACCTTGGTCTCAGAGATTGCTaGATAGTAGGCACAGGTCATCTTAATGAGCCAGGCAGCCCGCAT +
Preference number: 5 (lower is better)
Translates to: ERVNMSLLNLGLRDC*IVGTGHLNEPGSPH
Trigger: ATGCGGGCTGCCTGGCTCATTAAGATGACCTGTGCCTACTATGCAGCAATCTCTGAGACCAAGGTTAAGAAGAGACATGTTGACCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 90 bp CATGAAAGGGTCAACATGTCTCTTCTTAACCTTGGTCTCAGAGATTaGTGCATAGTAGGCACAGGTCATCTTAATGAGCCAGGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: HERVNMSLLNLGLRD*CIVGTGHLNEPGSP
Trigger: CGGGCTGCCTGGCTCATTAAGATGACCTGTGCCTACTATGCAGCAATCTCTGAGACCAAGGTTAAGAAGAGACATGTTGACCCTTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 90 bp GTCCCAATCCAAAGATTCGGTTACAAAGGGAGTCAAGAGAGTTGCTaGAGTCAGAGCGTTCAAAACTATGGCTGTCCAGCACTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: VPIQRFGYKGSQESC*SQSVQNYGCPALPK
Trigger: CTTTGGAAGTGCTGGACAGCCATAGTTTTGAACGCTCTGACTTCAGCAACTCTCTTGACTCCCTTTGTAACCGAATCTTTGGATTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp GGTGTTCGTAGCTCAAGATCCCGAAGGCCGCCATCTTaGCCAGCCCGTAGCGCCGGAGGCACCAGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: GVRSSRSRRPPS*PARSAGGTSRA
Trigger: GGCCCTGCTGGTGCCTCCGGCGCTACGGGCTGGGCAAGATGGCGGCCTTCGGGATCTTGAGCTACGAACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp GCTGCTGTTGCTGCTGCTGCTGCTGCTCAGGTAGGATaGCTGTTGAACGGACGCCTGCCTGGACGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: AAVAAAAAAQVG*LLNGRLPGRPG
Trigger: CCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp GCCCTGACTCTGGAGCTGTTGGCGAAGGCGCTGTCCTaGGGGCACCGCAGGTTGCTGCTGCCGGTACACAGA +
Preference number: 6 (lower is better)
Translates to: ALTLELLAKALS*GHRRLLLPVHR
Trigger: TCTGTGTACCGGCAGCAGCAACCTGCGGTGCCCCAAGGACAGCGCCTTCGCCAACAGCTCCAGAGTCAGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374102.5
CDS CAA 72 bp GTTGCTGCTGCTGCTGCTGCTCAGGTAGGATGGCTGTaGAACGGACGCCTGCCTGGACGCCCTGGGCACTCA +
Preference number: 6 (lower is better)
Translates to: VAAAAAAQVGWL*NGRLPGRPGHS
Trigger: TGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp CTGACTCTGCTGGAGCTGTTGGCGAAGGCGCTGTCCTaGGGGCACCGCAGGTTGCTGCTGCCGGTACACAGA +
Preference number: 6 (lower is better)
Translates to: LTLLELLAKALS*GHRRLLLPVHR
Trigger: TCTGTGTACCGGCAGCAGCAACCTGCGGTGCCCCAAGGACAGCGCCTTCGCCAACAGCTCCAGCAGAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374080.8
ENST00000444034.1
CDS CAA 90 bp TGGGCAGCACTCCAGGGTAAGTTGGTCGGGTGGGCAGCTTCTGCATaGGTAAGCGCACAGGACGGTATGGGTCCACACGAGGGCCACCTG +
Preference number: 6 (lower is better)
Translates to: WAALQGKLVGWAASA*VSAQDGMGPHEGHL
Trigger: CAGGTGGCCCTCGTGTGGACCCATACCGTCCTGTGCGCTTACCAATGCAGAAGCTGCCCACCCGACCAACTTACCCTGGAGTGCTGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS GCA 72 bp GTGGGGAAGGCTTCAGGCCGGTTGCGTCGCCGCTTCTaGCCATCCTCCCCACCTAAGAATGTCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: VGKASGRLRRRF*PSSPPKNVRSP
Trigger: TGGAGACCTGACATTCTTAGGTGGGGAGGATGGGCAGAAGCGGCGACGCAACCGGCCTGAAGCCTTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp GGCTGGGGTTGGGGAGGAGCCGCCTGTTGCTGCTGTTaGTGCTGGTGTTGCTGTTGTTGCTGTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GWGWGGAACCCC*CWCCCCCCCCC
Trigger: GCAGCAGCAACAGCAACAACAGCAACACCAGCAGCAACAGCAGCAACAGGCGGCTCCTCCCCAACCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp ATCTTTGCCTGGAGCTGTTGGCGAAGGCGCTGTCCTTaGGGCACCGCAGGTTGCTGCTGCCGGTACACAGAG +
Preference number: 6 (lower is better)
Translates to: IFAWSCWRRRCP*GTAGCCCRYTE
Trigger: CTCTGTGTACCGGCAGCAGCAACCTGCGGTGCCCCAAGGACAGCGCCTTCGCCAACAGCTCCAGGCAAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333646.10
CDS CAA 90 bp GGCGGCCGAGAGACAACAAGGGGGCACGTTAGAAACTCTCGACCATaGCCGGAAACTACCGAGGGAAGCCGAGGTACGCCGGGAACCATC +
Preference number: 6 (lower is better)
Translates to: GGRETTRGHVRNSRP*PETTEGSRGTPGTI
Trigger: GATGGTTCCCGGCGTACCTCGGCTTCCCTCGGTAGTTTCCGGCAATGGTCGAGAGTTTCTAACGTGCCCCCTTGTTGTCTCTCGGCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333646.10
CDS CAA 90 bp GTTGCTGCTGTTGCTGCTGCTGCTGCTGCTCAGGTAGGATGGCTGTaGAACGGACGCCTGCCTGGACGCCCTGGGCACTCATTGGAGTCA +
Preference number: 6 (lower is better)
Translates to: VAAVAAAAAAQVGWL*NGRLPGRPGHSLES
Trigger: TGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp CGCTCTGCAGAGGAGCCATCGGACCGGTTCATCCCATaGTTCACGACGCCACACAGCCCCTCAAAGACCTGT +
Preference number: 6 (lower is better)
Translates to: RSAEEPSDRFIP*FTTPHSPSKTC
Trigger: ACAGGTCTTTGAGGGGCTGTGTGGCGTCGTGAAGCATGGGATGAACCGGTCCGATGGCTCCTCTGCAGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
CDS GCA 72 bp GAGCCCTGTGGCTCACACGTGATGACATCTCGGGTCTaGTTGGGCAGTGGCAGCAGCTGGCGAACCTTTTCC +
Preference number: 6 (lower is better)
Translates to: EPCGSHVMTSRV*LGSGSSWRTFS
Trigger: GGAAAAGGTTCGCCAGCTGCTGCCACTGCCCAAGCAGACCCGAGATGTCATCACGTGTGAGCCACAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp TGGGGTTGGGGAGGAGCCGCCTGTTGCTGCTGTTGCTaGTGGTGTTGCTGTTGTTGCTGTTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: WGWGGAACCCCC*WCCCCCCCCCC
Trigger: GCAGCAGCAGCAACAGCAACAACAGCAACACCAGCAGCAACAGCAGCAACAGGCGGCTCCTCCCCAACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp CGCTGCTTTCCCACCCCAAACAGTACGACCAACCGCTaGTTGCACTCATGGCTGCATGACTCCTCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: RCFPTPNSTTNR*LHSWLHDSSWG
Trigger: CCCCCAGGAGGAGTCATGCAGCCATGAGTGCAACCAGCGGTTGGTCGTACTGTTTGGGGTGGGAAAGCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp GGCTGGCTGCGTTTCTTGCCCTTGGTGGACTTCTTCTaGCGTTCCTCAGTACTGGGTGGAGCAGCCCCCGGT +
Preference number: 6 (lower is better)
Translates to: GWLRFLPLVDFF*RSSVLGGAAPG
Trigger: ACCGGGGGCTGCTCCACCCAGTACTGAGGAACGCAAGAAGAAGTCCACCAAGGGCAAGAAACGCAGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp TATCTTTGCCTGGAGCTGTTGGCGAAGGCGCTGTCCTaGGGGCACCGCAGGTTGCTGCTGCCGGTACACAGA +
Preference number: 6 (lower is better)
Translates to: YLCLELLAKALS*GHRRLLLPVHR
Trigger: TCTGTGTACCGGCAGCAGCAACCTGCGGTGCCCCAAGGACAGCGCCTTCGCCAACAGCTCCAGGCAAAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333646.10
CDS CAA 90 bp CTGGGGTTGGGGAGGAGCCGCCTGTTGCTGCTGTTGCTGCTGGTGTaGCTGTTGTTGCTGTTGCTGCTGCTGCTGTTGCTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LGLGRSRLLLLLLLV*LLLLLLLLLLLLLL
Trigger: CAGCAGCAACAGCAACAGCAGCAGCAGCAACAGCAACAACAGCAACACCAGCAGCAACAGCAGCAACAGGCGGCTCCTCCCCAACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp CAACATGCCCTGACTCTGCTGGAGCTGTTGGCGAAGGCGCTGTCCTaGGGGCACCGCAGGTTGCTGCTGCCGGTACACAGAGGTCTTATA +
Preference number: 6 (lower is better)
Translates to: QHALTLLELLAKALS*GHRRLLLPVHRGLI
Trigger: TATAAGACCTCTGTGTACCGGCAGCAGCAACCTGCGGTGCCCCAAGGACAGCGCCTTCGCCAACAGCTCCAGCAGAGTCAGGGCATGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374080.8
ENST00000444034.1
CDS CAA 90 bp TCCCAACATGCCCTGACTCTGGAGCTGTTGGCGAAGGCGCTGTCCTaGGGGCACCGCAGGTTGCTGCTGCCGGTACACAGAGGTCTTATA +
Preference number: 6 (lower is better)
Translates to: SQHALTLELLAKALS*GHRRLLLPVHRGLI
Trigger: TATAAGACCTCTGTGTACCGGCAGCAGCAACCTGCGGTGCCCCAAGGACAGCGCCTTCGCCAACAGCTCCAGAGTCAGGGCATGTTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374102.5
CDS GCA 72 bp CAGCGAACTTCAACTGCCTGTCCCCGCTCCTTGATCTaGTGCTCGATCTCCCGCAACTTTGCACGGACCTGC +
Preference number: 6 (lower is better)
Translates to: QRTSTACPRSLI*CSISRNFARTC
Trigger: GCAGGTCCGTGCAAAGTTGCGGGAGATCGAGCAGCAGATCAAGGAGCGGGGACAGGCAGTTGAAGTTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp AGATATCTTCAGCAGTGGGGAAGGCTTCAGGCCGGTTaGGTCGCCGCTTCTGCCCATCCTCCCCACCTAAGA +
Preference number: 6 (lower is better)
Translates to: RYLQQWGRLQAG*VAASAHPPHLR
Trigger: TCTTAGGTGGGGAGGATGGGCAGAAGCGGCGACGCAACCGGCCTGAAGCCTTCCCCACTGCTGAAGATATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp TGCTGTTGCTGTTGCTGCTGTTGCTGCTGCTGCTGCTaGTCAGGTAGGATGGCTGTTGAACGGACGCCTGCC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*SGRMAVERTPA
Trigger: GGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TGCACGGACCTGCTGAGTGAAGGCACTGTTACCCTCTaGCATGGGCAGGTTGGACGGGGCAATAGGCAAGTG +
Preference number: 6 (lower is better)
Translates to: CTDLLSEGTVTL*HGQVGRGNRQV
Trigger: CACTTGCCTATTGCCCCGTCCAACCTGCCCATGCCAGAGGGTAACAGTGCCTTCACTCAGCAGGTCCGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TGCTGCGCAGCACGTACTTGGCATAGACATCCAGACTaGCTGTCTCCACAGAGATGTTGCGGCCACCCTGCC +
Preference number: 6 (lower is better)
Translates to: CCAARTWHRHPD*LSPQRCCGHPA
Trigger: GGCAGGGTGGCCGCAACATCTCTGTGGAGACAGCCAGTCTGGATGTCTATGCCAAGTACGTGCTGCGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000460771.1
CDS CCA 72 bp GGCAGCAGCTGGCGAACCTTTTCCAGACTGTCTGACTaGCGCTCCCCCAACTCCTTCTGCAACTTCTTCGCC +
Preference number: 6 (lower is better)
Translates to: GSSWRTFSRLSD*RSPNSFCNFFA
Trigger: GGCGAAGAAGTTGCAGAAGGAGTTGGGGGAGCGCCAGTCAGACAGTCTGGAAAAGGTTCGCCAGCTGCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp ATGACATCTCGGGTCTGCTTGGGCAGTGGCAGCAGCTaGCGAACCTTTTCCAGACTGTCTGACTGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: MTSRVCLGSGSS*RTFSRLSDWRS
Trigger: GGAGCGCCAGTCAGACAGTCTGGAAAAGGTTCGCCAGCTGCTGCCACTGCCCAAGCAGACCCGAGATGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TGGTTGTGGGCAGCACTCCAGGGTAAGTTGGTCGGGTaGGCAGCTTCTGCATTGGTAAGCGCACAGGACGGT +
Preference number: 6 (lower is better)
Translates to: WLWAALQGKLVG*AASALVSAQDG
Trigger: ACCGTCCTGTGCGCTTACCAATGCAGAAGCTGCCCACCCGACCAACTTACCCTGGAGTGCTGCCCACAACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS CAA 72 bp AAGATATCTTCAGCAGTGGGGAAGGCTTCAGGCCGGTaGCGTCGCCGCTTCTGCCCATCCTCCCCACCTAAG +
Preference number: 6 (lower is better)
Translates to: KISSAVGKASGR*RRRFCPSSPPK
Trigger: CTTAGGTGGGGAGGATGGGCAGAAGCGGCGACGCAACCGGCCTGAAGCCTTCCCCACTGCTGAAGATATCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp CTGACTCTGTATCTTTGCCTGGAGCTGTTGGCGAAGGCGCTGTCCTaGGGGCACCGCAGGTTGCTGCTGCCGGTACACAGAGGTCTTATA +
Preference number: 6 (lower is better)
Translates to: LTLYLCLELLAKALS*GHRRLLLPVHRGLI
Trigger: TATAAGACCTCTGTGTACCGGCAGCAGCAACCTGCGGTGCCCCAAGGACAGCGCCTTCGCCAACAGCTCCAGGCAAAGATACAGAGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333646.10
CDS CAA 90 bp GGATGGCTGTTGAACGGACGCCTGCCTGGACGCCCTGGGCACTCATaGGAGTCATGGTACTTATCATGGGTGTCTGCTGCAGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: GWLLNGRLPGRPGHS*ESWYLSWVSAAVSG
Trigger: ACCAGACACTGCAGCAGACACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS TCA 72 bp GTGGGCCCCACAGATATAGGCGGGGAGCAAGCCTGCTaGGGAAGAGGGCCCACTCTTGGTAACACAACAGTA +
Preference number: 6 (lower is better)
Translates to: VGPTDIGGEQAC*GRGPTLGNTTV
Trigger: TACTGTTGTGTTACCAAGAGTGGGCCCTCTTCCTCAGCAGGCTTGCTCCCCGCCTATATCTGTGGGGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462984.1
CDS GCA 72 bp AGACAACAAGGGGGCACGTTAGAAACTCTCGACCATTaGCGGAAACTACCGAGGGAAGCCGAGGTACGCCGG +
Preference number: 6 (lower is better)
Translates to: RQQGGTLETLDH*RKLPREAEVRR
Trigger: CCGGCGTACCTCGGCTTCCCTCGGTAGTTTCCGGCAATGGTCGAGAGTTTCTAACGTGCCCCCTTGTTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333646.10
CDS GCA 72 bp ATGCTTCACGACGCCACACAGCCCCTCAAAGACCTGTaGCATCTGGTCCTGGTTGAGGATGAGGCAGGCATG +
Preference number: 6 (lower is better)
Translates to: MLHDATQPLKDL*HLVLVEDEAGM
Trigger: CATGCCTGCCTCATCCTCAACCAGGACCAGATGGCACAGGTCTTTGAGGGGCTGTGTGGCGTCGTGAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
ENST00000471663.5
CDS GCA 72 bp TGCTGCTGTTGCTGTTGCTGCTGTTGCTGCTGCTGCTaGTGCTCAGGTAGGATGGCTGTTGAACGGACGCCT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CSGRMAVERTP
Trigger: AGGCGTCCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp TGCTGCTGCTGCTGTTGCTGTTGCTGCTGTTGCTGCTaGTGCTGCTGCTCAGGTAGGATGGCTGTTGAACGG +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCSGRMAVER
Trigger: CCGTTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAGCAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TGCCCTTGGTGGACTTCTTCTTGCGTTCCTCAGTACTaGGTGGAGCAGCCCCCGGTTTGTCAGTTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: CPWWTSSCVPQY*VEQPPVCQFWG
Trigger: CCCCCAAAACTGACAAACCGGGGGCTGCTCCACCCAGTACTGAGGAACGCAAGAAGAAGTCCACCAAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp CGCCTGCCTGGACGCCCTGGGCACTCATTGGAGTCATaGTACTTATCATGGGTGTCTGCTGCAGTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: RLPGRPGHSLES*YLSWVSAAVSG
Trigger: ACCAGACACTGCAGCAGACACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS CCA 72 bp TGCTCAGGTAGGATGGCTGTTGAACGGACGCCTGCCTaGACGCCCTGGGCACTCATTGGAGTCATGGTACTT +
Preference number: 6 (lower is better)
Translates to: CSGRMAVERTPA*TPWALIGVMVL
Trigger: AAGTACCATGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCTACCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS CAA 72 bp GAGACAACAAGGGGGCACGTTAGAAACTCTCGACCATaGCCGGAAACTACCGAGGGAAGCCGAGGTACGCCG +
Preference number: 6 (lower is better)
Translates to: ETTRGHVRNSRP*PETTEGSRGTP
Trigger: CGGCGTACCTCGGCTTCCCTCGGTAGTTTCCGGCAATGGTCGAGAGTTTCTAACGTGCCCCCTTGTTGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333646.10
CDS CAA 72 bp GCGGGGAGCAAGCCTGCTGAGGAAGAGGGCCCACTCTaGGTAACACAACAGTATGTGGAGGACACAGTCCAC +
Preference number: 6 (lower is better)
Translates to: AGSKPAEEEGPL*VTQQYVEDTVH
Trigger: GTGGACTGTGTCCTCCACATACTGTTGTGTTACCAAGAGTGGGCCCTCTTCCTCAGCAGGCTTGCTCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462984.1
CDS CAA 90 bp GAGCTGCATGAGGCGCTGCGCCTGGGCACTACTCAACACTGGGTCTaGCAGGTCATTGCTGTCCTCACACAGAGACTTAAGGCAACGTTC +
Preference number: 6 (lower is better)
Translates to: ELHEALRLGTTQHWV*QVIAVLTQRLKATF
Trigger: GAACGTTGCCTTAAGTCTCTGTGTGAGGACAGCAATGACCTGCAAGACCCAGTGTTGAGTAGTGCCCAGGCGCAGCGCCTCATGCAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp TTGGTAGCTGGCTGGCTGCGTTTCTTGCCCTTGGTGGACTTCTTCTaGCGTTCCTCAGTACTGGGTGGAGCAGCCCCCGGTTTGTCAGTT +
Preference number: 6 (lower is better)
Translates to: LVAGWLRFLPLVDFF*RSSVLGGAAPGLSV
Trigger: AACTGACAAACCGGGGGCTGCTCCACCCAGTACTGAGGAACGCAAGAAGAAGTCCACCAAGGGCAAGAAACGCAGCCAGCCAGCTACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp AAGACCAGCGAACTTCAACTGCCTGTCCCCGCTCCTTaGTCTGCTGCTCGATCTCCCGCAACTTTGCACGGA +
Preference number: 6 (lower is better)
Translates to: KTSELQLPVPAP*SAARSPATLHG
Trigger: TCCGTGCAAAGTTGCGGGAGATCGAGCAGCAGATCAAGGAGCGGGGACAGGCAGTTGAAGTTCGCTGGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp GAGGCAAGTGGTATGACATGCCAAGGGCAAAGCTCGTaGTCTGCTCCAGAACATTCCGGGAGACCTGAGCCG +
Preference number: 6 (lower is better)
Translates to: EASGMTCQGQSS*SAPEHSGRPEP
Trigger: CGGCTCAGGTCTCCCGGAATGTTCTGGAGCAGATCACGAGCTTTGCCCTTGGCATGTCATACCACTTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp CAGTGGCAGCAGCTGGCGAACCTTTTCCAGACTGTCTaGCTGGCGCTCCCCCAACTCCTTCTGCAACTTCTT +
Preference number: 6 (lower is better)
Translates to: QWQQLANLFQTV*LALPQLLLQLL
Trigger: AAGAAGTTGCAGAAGGAGTTGGGGGAGCGCCAGTCAGACAGTCTGGAAAAGGTTCGCCAGCTGCTGCCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp TGCTGCTGCTGCTGCTGTTGCTGTTGCTGCTGTTGCTaGTGCTGCTGCTGCTCAGGTAGGATGGCTGTTGAA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCSGRMAVE
Trigger: TTCAACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAGCAGCAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp TGTTGCTGCTGCTGCTGCTGTTGCTGTTGCTGCTGTTaGTGCTGCTGCTGCTGCTCAGGTAGGATGGCTGTT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCCSGRMAV
Trigger: AACAGCCATCCTACCTGAGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACAGCAGCAGCAGCAGCAACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp TGGGAGTCATCTGATGGACAGATGACTGTCCCAACATaGCCTGACTCTGCTGGAGCTGTTGGCGAAGGCGCT +
Preference number: 6 (lower is better)
Translates to: WESSDGQMTVPT*PDSAGAVGEGA
Trigger: AGCGCCTTCGCCAACAGCTCCAGCAGAGTCAGGGCATGTTGGGACAGTCATCTGTCCATCAGATGACTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374080.8
ENST00000444034.1
CDS CCA 72 bp AGGATGGCTGTTGAACGGACGCCTGCCTGGACGCCCTaGGCACTCATTGGAGTCATGGTACTTATCATGGGT +
Preference number: 6 (lower is better)
Translates to: RMAVERTPAWTP*ALIGVMVLIMG
Trigger: ACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAACAGCCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS CAA 72 bp AAAGACCAGCGAACTTCAACTGCCTGTCCCCGCTCCTaGATCTGCTGCTCGATCTCCCGCAACTTTGCACGG +
Preference number: 6 (lower is better)
Translates to: KDQRTSTACPRS*ICCSISRNFAR
Trigger: CCGTGCAAAGTTGCGGGAGATCGAGCAGCAGATCAAGGAGCGGGGACAGGCAGTTGAAGTTCGCTGGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp GAGGCGCTGCGCCTGGGCACTACTCAACACTGGGTCTaGCAGGTCATTGCTGTCCTCACACAGAGACTTAAG +
Preference number: 6 (lower is better)
Translates to: EALRLGTTQHWV*QVIAVLTQRLK
Trigger: CTTAAGTCTCTGTGTGAGGACAGCAATGACCTGCAAGACCCAGTGTTGAGTAGTGCCCAGGCGCAGCGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp TTGAACGGACGCCTGCCTGGACGCCCTGGGCACTCATaGGAGTCATGGTACTTATCATGGGTGTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LNGRLPGRPGHS*ESWYLSWVSAA
Trigger: TGCAGCAGACACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCGTCCAGGCAGGCGTCCGTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS CAA 90 bp AACTTAGCAAAGATATCTTCAGCAGTGGGGAAGGCTTCAGGCCGGTaGCGTCGCCGCTTCTGCCCATCCTCCCCACCTAAGAATGTCAGG +
Preference number: 6 (lower is better)
Translates to: NLAKISSAVGKASGR*RRRFCPSSPPKNVR
Trigger: CCTGACATTCTTAGGTGGGGAGGATGGGCAGAAGCGGCGACGCAACCGGCCTGAAGCCTTCCCCACTGCTGAAGATATCTTTGCTAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp AGGCGCTGCGCCTGGGCACTACTCAACACTGGGTCTTGCAGGTCATaGCTGTCCTCACACAGAGACTTAAGGCAACGTTCTCCTACCCAT +
Preference number: 6 (lower is better)
Translates to: RRCAWALLNTGSCRS*LSSHRDLRQRSPTH
Trigger: ATGGGTAGGAGAACGTTGCCTTAAGTCTCTGTGTGAGGACAGCAATGACCTGCAAGACCCAGTGTTGAGTAGTGCCCAGGCGCAGCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp GTGATTTTCTTGATGGCATGGCGGGCATCATCTCGCTaGTTTCCCACCCCAAACAGTACGACCAACCGCTGG +
Preference number: 6 (lower is better)
Translates to: VIFLMAWRASSR*FPTPNSTTNRW
Trigger: CCAGCGGTTGGTCGTACTGTTTGGGGTGGGAAAGCAGCGAGATGATGCCCGCCATGCCATCAAGAAAATCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp AAGAACCCCAAGGGTCCCTTCAATCTTCTCCTTGGGTaGGGGCTTCACCTCCTTCTCGACATCTGGCTTCTC +
Preference number: 6 (lower is better)
Translates to: KNPKGPFNLLLG*GLHLLLDIWLL
Trigger: GAGAAGCCAGATGTCGAGAAGGAGGTGAAGCCCCCACCCAAGGAGAAGATTGAAGGGACCCTTGGGGTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp CGTAAAGAACCCCAAGGGTCCCTTCAATCTTCTCCTTaGGTGGGGGCTTCACCTCCTTCTCGACATCTGGCT +
Preference number: 6 (lower is better)
Translates to: RKEPQGSLQSSP*VGASPPSRHLA
Trigger: AGCCAGATGTCGAGAAGGAGGTGAAGCCCCCACCCAAGGAGAAGATTGAAGGGACCCTTGGGGTTCTTTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp CCCATTCCTGTTGGCAGATGCTGCGCAGCACGTACTTaGCATAGACATCCAGACTGGCTGTCTCCACAGAGA +
Preference number: 6 (lower is better)
Translates to: PIPVGRCCAART*HRHPDWLSPQR
Trigger: TCTCTGTGGAGACAGCCAGTCTGGATGTCTATGCCAAGTACGTGCTGCGCAGCATCTGCCAACAGGAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp GCACAGGCTTGGTCTTGCTGCTGCTGGGCATGTTGCTaGCAGTACTTCCAGAAGATGACCCTGTCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: AQAWSCCCWACC*QYFQKMTLSLL
Trigger: CAGCAGAGACAGGGTCATCTTCTGGAAGTACTGCAAGCAACATGCCCAGCAGCAGCAAGACCAAGCCTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp GGGCTGTGGCTGGGTATTAGAGAGCTGTTGTTGAAGTaGCCGGACCAAAGCTGCTGTCTGTTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: GLWLGIRELLLK*PDQSCCLLLLL
Trigger: CAGCAGCAGCAACAGACAGCAGCTTTGGTCCGGCAACTTCAACAACAGCTCTCTAATACCCAGCCACAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp GATGAACTGCACATGCTGCACCAGAGGCAAGTGGTATaGCATGCCAAGGGCAAAGCTCGTGATCTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: DELHMLHQRQVV*HAKGKARDLLQ
Trigger: CTGGAGCAGATCACGAGCTTTGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000471663.5
CDS GCA 72 bp GCAGCACAGCGAATCAGATCTTCCAGGAGCAAACACTaGCGAGCGATGAGGATGGCAACAAAAGTAGCCAGC +
Preference number: 6 (lower is better)
Translates to: AAQRIRSSRSKH*RAMRMATKVAS
Trigger: GCTGGCTACTTTTGTTGCCATCCTCATCGCTCGGCAGTGTTTGCTCCTGGAAGATCTGATTCGCTGTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000489199.1
CDS GCA 72 bp ATTAGAGAGCTGTTGTTGAAGTTGCCGGACCAAAGCTaGTGTCTGTTGCTGCTGCTGGGTCTGCTGAAGCCC +
Preference number: 6 (lower is better)
Translates to: IRELLLKLPDQS*CLLLLLGLLKP
Trigger: GGGCTTCAGCAGACCCAGCAGCAGCAACAGACAGCAGCTTTGGTCCGGCAACTTCAACAACAGCTCTCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TCTGGCATGGGCAGGTTGGACGGGGCAATAGGCAAGTaGTCAAGTGGTGAGCCGGTCTTAATTCTGCTATCA +
Preference number: 6 (lower is better)
Translates to: SGMGRLDGAIGK*SSGEPVLILLS
Trigger: TGATAGCAGAATTAAGACCGGCTCACCACTTGACCACTTGCCTATTGCCCCGTCCAACCTGCCCATGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TTGCCTGTAGTTAAGGTGTGTTATAGAACCAGGGTTTaGGTGGTGCAGGAGGTCCGGAGGCACTGTCACACC +
Preference number: 6 (lower is better)
Translates to: LPVVKVCYRTRV*VVQEVRRHCHT
Trigger: GGTGTGACAGTGCCTCCGGACCTCCTGCACCACCCAAACCCTGGTTCTATAACACACCTTAACTACAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS CAA 72 bp TTGGAACTGATCTTGGCAGGATTGAAGCTGACGTTCTaGGCACTGCCATGCTCATCCCCAGAGACAGCAGGC +
Preference number: 6 (lower is better)
Translates to: LELILAGLKLTF*ALPCSSPETAG
Trigger: GCCTGCTGTCTCTGGGGATGAGCATGGCAGTGCCAAGAACGTCAGCTTCAATCCTGCCAAGATCAGTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS CAA 72 bp GTGACTTGCAATAGCCGGTCAGCTCTGCACACAGGATaGCGATGTCATTCACCCTATCGGGATCATGGTGCC +
Preference number: 6 (lower is better)
Translates to: VTCNSRSALHTG*RCHSPYRDHGA
Trigger: GGCACCATGATCCCGATAGGGTGAATGACATCGCAATCCTGTGTGCAGAGCTGACCGGCTATTGCAAGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp CTGAGCACAGGCTTGGTCTTGCTGCTGCTGGGCATGTaGCTTGCAGTACTTCCAGAAGATGACCCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: LSTGLVLLLLGM*LAVLPEDDPVS
Trigger: AGAGACAGGGTCATCTTCTGGAAGTACTGCAAGCAACATGCCCAGCAGCAGCAAGACCAAGCCTGTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp TCTGTCTTGGTAGCTGGCTGGCTGCGTTTCTTGCCCTaGGTGGACTTCTTCTTGCGTTCCTCAGTACTGGGT +
Preference number: 6 (lower is better)
Translates to: SVLVAGWLRFLP*VDFFLRSSVLG
Trigger: ACCCAGTACTGAGGAACGCAAGAAGAAGTCCACCAAGGGCAAGAAACGCAGCCAGCCAGCTACCAAGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp GGTACTGGGCTGTGGCTGGGTATTAGAGAGCTGTTGTaGAAGTTGCCGGACCAAAGCTGCTGTCTGTTGCTG +
Preference number: 6 (lower is better)
Translates to: GTGLWLGIRELL*KLPDQSCCLLL
Trigger: CAGCAACAGACAGCAGCTTTGGTCCGGCAACTTCAACAACAGCTCTCTAATACCCAGCCACAGCCCAGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp TCTAGAGAGCTGAGCACAGGCTTGGTCTTGCTGCTGCTGGGCATGTaGCTTGCAGTACTTCCAGAAGATGACCCTGTCTCTGCTGACTGT +
Preference number: 6 (lower is better)
Translates to: SRELSTGLVLLLLGM*LAVLPEDDPVSADC
Trigger: ACAGTCAGCAGAGACAGGGTCATCTTCTGGAAGTACTGCAAGCAACATGCCCAGCAGCAGCAAGACCAAGCCTGTGCTCAGCTCTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp CTTTCAGTTCCGCATCCCCAAGTACAAACACAGCCTTaGGAACAGCAAACACGGCTCCATCCACGATGCGGT +
Preference number: 6 (lower is better)
Translates to: LSVPHPQVQTQP*EQQTRLHPRCG
Trigger: ACCGCATCGTGGATGGAGCCGTGTTTGCTGTTCTCAAGGCTGTGTTTGTACTTGGGGATGCGGAACTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000460771.1
CDS TCA 72 bp GAGGCAAGTGGTATGACATGCCAAGGGCAAAGCTCGTaGTCTGCTCCAGAACATTCCGGGAGACCTGATAAG +
Preference number: 6 (lower is better)
Translates to: EASGMTCQGQSS*SAPEHSGRPDK
Trigger: CTTATCAGGTCTCCCGGAATGTTCTGGAGCAGATCACGAGCTTTGCCCTTGGCATGTCATACCACTTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471663.5
CDS GCA 72 bp TTCCTGGCATTTATCGAAAGACCAGCGAACTTCAACTaGCTGTCCCCGCTCCTTGATCTGCTGCTCGATCTC +
Preference number: 6 (lower is better)
Translates to: FLAFIERPANFN*LSPLLDLLLDL
Trigger: GAGATCGAGCAGCAGATCAAGGAGCGGGGACAGGCAGTTGAAGTTCGCTGGTCTTTCGATAAATGCCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp AGGATTGCGATGTCATTCACCCTATCGGGATCATGGTaGCCCACACAGACGTGCATAAGGGCATTGCAGACA +
Preference number: 6 (lower is better)
Translates to: RIAMSFTLSGSW*PTQTCIRALQT
Trigger: TGTCTGCAATGCCCTTATGCACGTCTGTGTGGGGCACCATGATCCCGATAGGGTGAATGACATCGCAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TCGAAGATGAACTGCACATGCTGCACCAGAGGCAAGTaGTATGACATGCCAAGGGCAAAGCTCGTGATCTGC +
Preference number: 6 (lower is better)
Translates to: SKMNCTCCTRGK*YDMPRAKLVIC
Trigger: GCAGATCACGAGCTTTGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000471663.5
CDS CAA 72 bp TGCAGTCACCAGCCAGAAGTTATCCTTCTGGTTCACTaGGGGCTTCCTGCGACCAGTGTCAGGAAGGGTATT +
Preference number: 6 (lower is better)
Translates to: CSHQPEVILLVH*GLPATSVRKGI
Trigger: AATACCCTTCCTGACACTGGTCGCAGGAAGCCCCAAGTGAACCAGAAGGATAACTTCTGGCTGGTGACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS CAA 72 bp TCCAAGAGGGAGTTCATCTCATTGTTAGGGGTCTGCTaGATCATGAGCTGCAGCTCCAAGGAAGACTGGCGC +
Preference number: 6 (lower is better)
Translates to: SKREFISLLGVC*IMSCSSKEDWR
Trigger: GCGCCAGTCTTCCTTGGAGCTGCAGCTCATGATCAAGCAGACCCCTAACAATGAGATGAACTCCCTCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp CCCTCCTTCTTGAAGATGGAATCGAAGCCAGCAATCTaGTTGCCCTTGGTATCGATAAGGGAGCCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: PSFLKMESKPAI*LPLVSIREPCG
Trigger: GCCACAGGGCTCCCTTATCGATACCAAGGGCAACAAGATTGCTGGCTTCGATTCCATCTTCAAGAAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp CTGCTGAAGTTGGAACTGATCTTGGCAGGATTGAAGCTGACGTTCTaGGCACTGCCATGCTCATCCCCAGAGACAGCAGGCTGGTTATTG +
Preference number: 6 (lower is better)
Translates to: LLKLELILAGLKLTF*ALPCSSPETAGWLL
Trigger: CAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCAGTGCCAAGAACGTCAGCTTCAATCCTGCCAAGATCAGTTCCAACTTCAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS CAA 90 bp ACCTGTAGACCCTCCTTCTTGAAGATGGAATCGAAGCCAGCAATCTaGTTGCCCTTGGTATCGATAAGGGAGCCCTGTGGCTCACACGTG +
Preference number: 6 (lower is better)
Translates to: TCRPSFLKMESKPAI*LPLVSIREPCGSHV
Trigger: CACGTGTGAGCCACAGGGCTCCCTTATCGATACCAAGGGCAACAAGATTGCTGGCTTCGATTCCATCTTCAAGAAGGAGGGTCTACAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp GTCCCTTTGCGGTTCAGAACCTTCAAGATATCCTTGGTGATTTTCTaGATGGCATGGCGGGCATCATCTCGCTGCTTTCCCACCCCAAAC +
Preference number: 6 (lower is better)
Translates to: VPLRFRTFKISLVIF*MAWRASSRCFPTPN
Trigger: GTTTGGGGTGGGAAAGCAGCGAGATGATGCCCGCCATGCCATCAAGAAAATCACCAAGGATATCTTGAAGGTTCTGAACCGCAAAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp TGTAGACCCTCCTTCTTGAAGATGGAATCGAAGCCAGCAATCTTGTaGCCCTTGGTATCGATAAGGGAGCCCTGTGGCTCACACGTGATG +
Preference number: 6 (lower is better)
Translates to: CRPSFLKMESKPAIL*PLVSIREPCGSHVM
Trigger: CATCACGTGTGAGCCACAGGGCTCCCTTATCGATACCAAGGGCAACAAGATTGCTGGCTTCGATTCCATCTTCAAGAAGGAGGGTCTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp AGGTGTGAGCTGCAGGGTTCTCTAGAGTGTCGATCATaGACTCAGGTGCCCAGCGCATATTTGATTCCGATG +
Preference number: 6 (lower is better)
Translates to: RCELQGSLECRS*TQVPSAYLIPM
Trigger: CATCGGAATCAAATATGCGCTGGGCACCTGAGTTCATGATCGACACTCTAGAGAACCCTGCAGCTCACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp TTGGCAGGATTGAAGCTGACGTTCTTGGCACTGCCATaGTCATCCCCAGAGACAGCAGGCTGGTTATTGAAA +
Preference number: 6 (lower is better)
Translates to: LAGLKLTFLALP*SSPETAGWLLK
Trigger: TTTCAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCAGTGCCAAGAACGTCAGCTTCAATCCTGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS GCA 72 bp GTACAGATCATAGAGATAAGCAAGGATACAGCGCTCTaGAGAGGAGCCATCGGACCGGTTCATCCCATGCTT +
Preference number: 6 (lower is better)
Translates to: VQIIEISKDTAL*RGAIGPVHPML
Trigger: AAGCATGGGATGAACCGGTCCGATGGCTCCTCTGCAGAGCGCTGTATCCTTGCTTATCTCTATGATCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
CDS GCA 72 bp TTCCTCCATGCTACCTTGCGAGATGCTAGACATGTCTaGAGCCAATGTCCCATTGATGAGCACGCTCAGCAT +
Preference number: 6 (lower is better)
Translates to: FLHATLRDARHV*SQCPIDEHAQH
Trigger: ATGCTGAGCGTGCTCATCAATGGGACATTGGCTGCAGACATGTCTAGCATCTCGCAAGGTAGCATGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp AGTACCCGTCCAATGGTGAAGCCTGCAGTAGCTTCCTaGCATTTATCGAAAGACCAGCGAACTTCAACTGCC +
Preference number: 6 (lower is better)
Translates to: STRPMVKPAVAS*HLSKDQRTSTA
Trigger: GGCAGTTGAAGTTCGCTGGTCTTTCGATAAATGCCAGGAAGCTACTGCAGGCTTCACCATTGGACGGGTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp GTACTTCCAGAAGATGACCCTGTCTCTGCTGACTGTTaGAAAACCTCGATTGTGGCCTTGGCGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: VLPEDDPVSADC*KTSIVALAMFS
Trigger: GGAGAACATCGCCAAGGCCACAATCGAGGTTTTCCAACAGTCAGCAGAGACAGGGTCATCTTCTGGAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp CGCCCTGGGCACTCATTGGAGTCATGGTACTTATCATaGGTGTCTGCTGCAGTGTCTGGTGTGAAAACCTTT +
Preference number: 6 (lower is better)
Translates to: RPGHSLESWYLS*VSAAVSGVKTF
Trigger: AAAGGTTTTCACACCAGACACTGCAGCAGACACCCATGATAAGTACCATGACTCCAATGAGTGCCCAGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000444034.1
CDS CAA 72 bp TGCGAGATGCTAGACATGTCTGCAGCCAATGTCCCATaGATGAGCACGCTCAGCATGTCCAACACAGTAGTG +
Preference number: 6 (lower is better)
Translates to: CEMLDMSAANVP*MSTLSMSNTVV
Trigger: CACTACTGTGTTGGACATGCTGAGCGTGCTCATCAATGGGACATTGGCTGCAGACATGTCTAGCATCTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp TTGAAGATGGAATCGAAGCCAGCAATCTTGTTGCCCTaGGTATCGATAAGGGAGCCCTGTGGCTCACACGTG +
Preference number: 6 (lower is better)
Translates to: LKMESKPAILLP*VSIREPCGSHV
Trigger: CACGTGTGAGCCACAGGGCTCCCTTATCGATACCAAGGGCAACAAGATTGCTGGCTTCGATTCCATCTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp ATGCTACCTTGCGAGATGCTAGACATGTCTGCAGCCAATGTCCCATaGATGAGCACGCTCAGCATGTCCAACACAGTAGTGAAGAGCTCA +
Preference number: 6 (lower is better)
Translates to: MLPCEMLDMSAANVP*MSTLSMSNTVVKSS
Trigger: TGAGCTCTTCACTACTGTGTTGGACATGCTGAGCGTGCTCATCAATGGGACATTGGCTGCAGACATGTCTAGCATCTCGCAAGGTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp CTTCGCCAGGTTCATGTATGCACGCTTGTTTTCCTCCATGCTACCTaGCGAGATGCTAGACATGTCTGCAGCCAATGTCCCATTGATGAG +
Preference number: 6 (lower is better)
Translates to: LRQVHVCTLVFLHAT*RDARHVCSQCPIDE
Trigger: CTCATCAATGGGACATTGGCTGCAGACATGTCTAGCATCTCGCAAGGTAGCATGGAGGAAAACAAGCGTGCATACATGAACCTGGCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp CCCAACTCCTTCTGCAACTTCTTCGCCAGGTTCATGTATGCACGCTaGTTTTCCTCCATGCTACCTTGCGAGATGCTAGACATGTCTGCA +
Preference number: 6 (lower is better)
Translates to: PNSFCNFFARFMYAR*FSSMLPCEMLDMSA
Trigger: TGCAGACATGTCTAGCATCTCGCAAGGTAGCATGGAGGAAAACAAGCGTGCATACATGAACCTGGCGAAGAAGTTGCAGAAGGAGTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp AGTGTCGATCATGAACTCAGGTGCCCAGCGCATATTTaGTTCCGATGGCTCCACGTTGCAGTAGATGGTGTT +
Preference number: 6 (lower is better)
Translates to: SVDHELRCPAHI*FRWLHVAVDGV
Trigger: AACACCATCTACTGCAACGTGGAGCCATCGGAATCAAATATGCGCTGGGCACCTGAGTTCATGATCGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp CATGCTCTTCTGCTTTTGTCGATCACGTTCTTTGCGTaGAGAGGAACCCAGGTGCTGACCCTTCTCCAATTC +
Preference number: 6 (lower is better)
Translates to: HALLLLSITFFA*RGTQVLTLLQF
Trigger: GAATTGGAGAAGGGTCAGCACCTGGGTTCCTCTTCACGCAAAGAACGTGATCGACAAAAGCAGAAGAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp GAATATTCCATGAGGTCGAAGATGAACTGCACATGCTaGACCAGAGGCAAGTGGTATGACATGCCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: EYSMRSKMNCTC*TRGKWYDMPRA
Trigger: TGCCCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGACCTCATGGAATATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
ENST00000471663.5
CDS GCA 72 bp TTCTCCAAGAGGGAGTTCATCTCATTGTTAGGGGTCTaGTTGATCATGAGCTGCAGCTCCAAGGAAGACTGG +
Preference number: 6 (lower is better)
Translates to: FSKREFISLLGV*LIMSCSSKEDW
Trigger: CCAGTCTTCCTTGGAGCTGCAGCTCATGATCAAGCAGACCCCTAACAATGAGATGAACTCCCTCTTGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp CGGTTCAGAACCTTCAAGATATCCTTGGTGATTTTCTaGATGGCATGGCGGGCATCATCTCGCTGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: RFRTFKISLVIF*MAWRASSRCFP
Trigger: GGGAAAGCAGCGAGATGATGCCCGCCATGCCATCAAGAAAATCACCAAGGATATCTTGAAGGTTCTGAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp TCCTTCTTGAAGATGGAATCGAAGCCAGCAATCTTGTaGCCCTTGGTATCGATAAGGGAGCCCTGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: SFLKMESKPAIL*PLVSIREPCGS
Trigger: TGAGCCACAGGGCTCCCTTATCGATACCAAGGGCAACAAGATTGCTGGCTTCGATTCCATCTTCAAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp ACTGCCATGCTCATCCCCAGAGACAGCAGGCTGGTTATTGAAACCTaGTTTTACATTCAAGGCCGTCAGTTCATCCTCCTTCTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: TAMLIPRDSRLVIET*FYIQGRQFILLLFG
Trigger: CCCAAACAGAAGGAGGATGAACTGACGGCCTTGAATGTAAAACAAGGTTTCAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp TTCTTGGCACTGCCATGCTCATCCCCAGAGACAGCAGGCTGGTTATaGAAACCTTGTTTTACATTCAAGGCCGTCAGTTCATCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: FLALPCSSPETAGWL*KPCFTFKAVSSSSF
Trigger: GAAGGAGGATGAACTGACGGCCTTGAATGTAAAACAAGGTTTCAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCAGTGCCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp TTCCAGAAGATGACCCTGTCTCTGCTGACTGTTGGAAAACCTCGATaGTGGCCTTGGCGATGTTCTCCAAGAGGGAGTTCATCTCATTGT +
Preference number: 6 (lower is better)
Translates to: FQKMTLSLLTVGKPR*WPWRCSPRGSSSHC
Trigger: ACAATGAGATGAACTCCCTCTTGGAGAACATCGCCAAGGCCACAATCGAGGTTTTCCAACAGTCAGCAGAGACAGGGTCATCTTCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp CGTTCAAAACTATGGCTGTCCAGCACTTCCAAAGTATaGAGTACCCGTCCAATGGTGAAGCCTGCAGTAGCT +
Preference number: 6 (lower is better)
Translates to: RSKLWLSSTSKV*STRPMVKPAVA
Trigger: AGCTACTGCAGGCTTCACCATTGGACGGGTACTTCATACTTTGGAAGTGCTGGACAGCCATAGTTTTGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS TCA 72 bp GGAGACCTGAGCCGTGACCTGGTGTTGGTCATAATGTaGAAGGTGCTGGAACTTAGCAAAGATATCTTCAGC +
Preference number: 6 (lower is better)
Translates to: GDLSRDLVLVIM*KVLELSKDIFS
Trigger: GCTGAAGATATCTTTGCTAAGTTCCAGCACCTTTCACATTATGACCAACACCAGGTCACGGCTCAGGTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp AGTGAATATTCCATGAGGTCGAAGATGAACTGCACATaGTGCACCAGAGGCAAGTGGTATGACATGCCAAGG +
Preference number: 6 (lower is better)
Translates to: SEYSMRSKMNCT*CTRGKWYDMPR
Trigger: CCTTGGCATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGACCTCATGGAATATTCACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
ENST00000471663.5
CDS GCA 72 bp GTGCCCAGCGCATATTTGATTCCGATGGCTCCACGTTaGAGTAGATGGTGTTCTTCACCTTTGAGCAAAAGT +
Preference number: 6 (lower is better)
Translates to: VPSAYLIPMAPR*SRWCSSPLSKS
Trigger: ACTTTTGCTCAAAGGTGAAGAACACCATCTACTGCAACGTGGAGCCATCGGAATCAAATATGCGCTGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp CCTTTCAGACATGTTAGCACCAGCGATAAGAAGGGCTaGTGGCTCAATAGGGACATGCTCTTCTGCTTTTGT +
Preference number: 6 (lower is better)
Translates to: PFRHVSTSDKKG*WLNRDMLFCFC
Trigger: ACAAAAGCAGAAGAGCATGTCCCTATTGAGCCAGCAGCCCTTCTTATCGCTGGTGCTAACATGTCTGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp TTCATGTATGCACGCTTGTTTTCCTCCATGCTACCTTaGGAGATGCTAGACATGTCTGCAGCCAATGTCCCA +
Preference number: 6 (lower is better)
Translates to: FMYARLFSSMLP*EMLDMSAANVP
Trigger: TGGGACATTGGCTGCAGACATGTCTAGCATCTCGCAAGGTAGCATGGAGGAAAACAAGCGTGCATACATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp CAACTCCTTCTGCAACTTCTTCGCCAGGTTCATGTATaGACGCTTGTTTTCCTCCATGCTACCTTGCGAGAT +
Preference number: 6 (lower is better)
Translates to: QLLLQLLRQVHV*TLVFLHATLRD
Trigger: ATCTCGCAAGGTAGCATGGAGGAAAACAAGCGTGCATACATGAACCTGGCGAAGAAGTTGCAGAAGGAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TTCAGACATGTTAGCACCAGCGATAAGAAGGGCTGCTaGCTCAATAGGGACATGCTCTTCTGCTTTTGTCGA +
Preference number: 6 (lower is better)
Translates to: FRHVSTSDKKGC*LNRDMLFCFCR
Trigger: TCGACAAAAGCAGAAGAGCATGTCCCTATTGAGCCAGCAGCCCTTCTTATCGCTGGTGCTAACATGTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp CTGCCATGCTCATCCCCAGAGACAGCAGGCTGGTTATaGAAACCTTGTTTTACATTCAAGGCCGTCAGTTCA +
Preference number: 6 (lower is better)
Translates to: LPCSSPETAGWL*KPCFTFKAVSS
Trigger: TGAACTGACGGCCTTGAATGTAAAACAAGGTTTCAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS CAA 72 bp GCTGTCCCTTTGCGGTTCAGAACCTTCAAGATATCCTaGGTGATTTTCTTGATGGCATGGCGGGCATCATCT +
Preference number: 6 (lower is better)
Translates to: AVPLRFRTFKIS*VIFLMAWRASS
Trigger: AGATGATGCCCGCCATGCCATCAAGAAAATCACCAAGGATATCTTGAAGGTTCTGAACCGCAAAGGGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp ACATTGCAGAGGAGATCGTTGAAACCACAAGTGCCATaGTTAGAGGAGCAGCACAAGGCCTTAAGCACTCCT +
Preference number: 6 (lower is better)
Translates to: TLQRRSLKPQVP*LEEQHKALSTP
Trigger: AGGAGTGCTTAAGGCCTTGTGCTGCTCCTCTAACAATGGCACTTGTGGTTTCAACGATCTCCTCTGCAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000489199.1
CDS CAA 72 bp TTCTGCAACTTCTTCGCCAGGTTCATGTATGCACGCTaGTTTTCCTCCATGCTACCTTGCGAGATGCTAGAC +
Preference number: 6 (lower is better)
Translates to: FCNFFARFMYAR*FSSMLPCEMLD
Trigger: GTCTAGCATCTCGCAAGGTAGCATGGAGGAAAACAAGCGTGCATACATGAACCTGGCGAAGAAGTTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp AACCCCTCAAAAAGATCCCAGGGCGAGATCTTCTGTTaGGTGGAAACCTGTAGACCCTCCTTCTTGAAGATG +
Preference number: 6 (lower is better)
Translates to: NPSKRSQGEIFC*VETCRPSFLKM
Trigger: CATCTTCAAGAAGGAGGGTCTACAGGTTTCCACCAAACAGAAGATCTCGCCCTGGGATCTTTTTGAGGGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp CTAGGTCCCAATCCAAAGATTCGGTTACAAAGGGAGTCAAGAGAGTaGCTGAAGTCAGAGCGTTCAAAACTATGGCTGTCCAGCACTTCC +
Preference number: 6 (lower is better)
Translates to: LGPNPKIRLQRESRE*LKSERSKLWLSSTS
Trigger: GGAAGTGCTGGACAGCCATAGTTTTGAACGCTCTGACTTCAGCAACTCTCTTGACTCCCTTTGTAACCGAATCTTTGGATTGGGACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp TCAGTTTCTGCTGTCCCTTTGCGGTTCAGAACCTTCAAGATATCCTaGGTGATTTTCTTGATGGCATGGCGGGCATCATCTCGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: SVSAVPLRFRTFKIS*VIFLMAWRASSRCF
Trigger: AAAGCAGCGAGATGATGCCCGCCATGCCATCAAGAAAATCACCAAGGATATCTTGAAGGTTCTGAACCGCAAAGGGACAGCAGAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp CTGACATCAACATTGCAGAGGAGATCGTTGAAACCACAAGTGCCATaGTTAGAGGAGCAGCACAAGGCCTTAAGCACTCCTAGCCATTCT +
Preference number: 6 (lower is better)
Translates to: LTSTLQRRSLKPQVP*LEEQHKALSTPSHS
Trigger: AGAATGGCTAGGAGTGCTTAAGGCCTTGTGCTGCTCCTCTAACAATGGCACTTGTGGTTTCAACGATCTCCTCTGCAATGTTGATGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000489199.1
CDS TCA 72 bp TGCCATGCTCATCCCCAGAGACAGCAGGCTGGTTATTaGAACCTTGTTTTACATTCAAGGCCGTCAGTTCAT +
Preference number: 6 (lower is better)
Translates to: CHAHPQRQQAGY*NLVLHSRPSVH
Trigger: ATGAACTGACGGCCTTGAATGTAAAACAAGGTTTCAATAACCAGCCTGCTGTCTCTGGGGATGAGCATGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000429213.2
CDS TCA 72 bp GCGATGAGGATGGCAACAAAAGTAGCCAGCGAGTCATaGAAAGATAGGTCACTGACATCAACATTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: AMRMATKVASES*KDRSLTSTLQR
Trigger: CCTCTGCAATGTTGATGTCAGTGACCTATCTTTTCATGACTCGCTGGCTACTTTTGTTGCCATCCTCATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000489199.1
CDS GCA 72 bp ATGCTGAGTGAATATTCCATGAGGTCGAAGATGAACTaGACATGCTGCACCAGAGGCAAGTGGTATGACATG +
Preference number: 6 (lower is better)
Translates to: MLSEYSMRSKMN*TCCTRGKWYDM
Trigger: CATGTCATACCACTTGCCTCTGGTGCAGCATGTGCAGTTCATCTTCGACCTCATGGAATATTCACTCAGCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000462984.1
ENST00000471663.5
CDS CAA 72 bp CTCATCCCCAGAGACAGCAGGCTGGTTATTGAAACCTaGTTTTACATTCAAGGCCGTCAGTTCATCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LIPRDSRLVIET*FYIQGRQFILL
Trigger: AAGGAGGATGAACTGACGGCCTTGAATGTAAAACAAGGTTTCAATAACCAGCCTGCTGTCTCTGGGGATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp GATAGGTCACTGACATCAACATTGCAGAGGAGATCGTaGAAACCACAAGTGCCATTGTTAGAGGAGCAGCAC +
Preference number: 6 (lower is better)
Translates to: DRSLTSTLQRRS*KPQVPLLEEQH
Trigger: GTGCTGCTCCTCTAACAATGGCACTTGTGGTTTCAACGATCTCCTCTGCAATGTTGATGTCAGTGACCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
ENST00000489199.1
CDS TCA 72 bp CAAAGATTCGGTTACAAAGGGAGTCAAGAGAGTTGCTaGAGTCAGAGCGTTCAAAACTATGGCTGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: QRFGYKGSQESC*SQSVQNYGCPA
Trigger: TGCTGGACAGCCATAGTTTTGAACGCTCTGACTTCAGCAACTCTCTTGACTCCCTTTGTAACCGAATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp AGGTTGAGCCGCAGTTTGAGTGCCTCATGCATAAGCTaGTTTGGTTTGCAATCATCTAAGTACTGGTCATCT +
Preference number: 6 (lower is better)
Translates to: RLSRSLSASCIS*FGLQSSKYWSS
Trigger: AGATGACCAGTACTTAGATGATTGCAAACCAAAGCAGCTTATGCATGAGGCACTCAAACTGCGGCTCAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp ACAATAGGAGCAAGCTGGTCAGTTTCTGCTGTCCCTTaGCGGTTCAGAACCTTCAAGATATCCTTGGTGATT +
Preference number: 6 (lower is better)
Translates to: TIGASWSVSAVP*RFRTFKISLVI
Trigger: AATCACCAAGGATATCTTGAAGGTTCTGAACCGCAAAGGGACAGCAGAAACTGACCAGCTTGCTCCTATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 90 bp AGGTTGAGCCGCAGTTTGAGTGCCTCATGCATAAGCTGCTTTGGTTaGCAATCATCTAAGTACTGGTCATCTCGCCAATTATTCACAATC +
Preference number: 6 (lower is better)
Translates to: RLSRSLSASCISCFG*QSSKYWSSRQLFTI
Trigger: GATTGTGAATAATTGGCGAGATGACCAGTACTTAGATGATTGCAAACCAAAGCAGCTTATGCATGAGGCACTCAAACTGCGGCTCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS GCA 72 bp GTCAACATGTCTCTTCTTAACCTTGGTCTCAGAGATTaGTGCATAGTAGGCACAGGTCATCTTAATGAGCCA +
Preference number: 6 (lower is better)
Translates to: VNMSLLNLGLRD*CIVGTGHLNEP
Trigger: TGGCTCATTAAGATGACCTGTGCCTACTATGCAGCAATCTCTGAGACCAAGGTTAAGAAGAGACATGTTGAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CAA 72 bp CGCAGTTTGAGTGCCTCATGCATAAGCTGCTTTGGTTaGCAATCATCTAAGTACTGGTCATCTCGCCAATTA +
Preference number: 6 (lower is better)
Translates to: RSLSASCISCFG*QSSKYWSSRQL
Trigger: TAATTGGCGAGATGACCAGTACTTAGATGATTGCAAACCAAAGCAGCTTATGCATGAGGCACTCAAACTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5
CDS CCA 72 bp TGCATAAGCTGCTTTGGTTTGCAATCATCTAAGTACTaGTCATCTCGCCAATTATTCACAATCTGGTGCACC +
Preference number: 6 (lower is better)
Translates to: CISCFGLQSSKY*SSRQLFTIWCT
Trigger: GGTGCACCAGATTGTGAATAATTGGCGAGATGACCAGTACTTAGATGATTGCAAACCAAAGCAGCTTATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333646.10
ENST00000374080.8
ENST00000374102.5