RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MED1 (Homo sapiens)

Ensembl gene IDs: ENSG00000125686

Ensembl transcript IDs: ENST00000300651.11, ENST00000394287.7, ENST00000577831.5, ENST00000581334.1, ENST00000584308.1

Found 929 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCATCGGGTGGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGGGGTCGGACTCGAGCCAATGGTAGA +
Preference number: 1 (lower is better)
Translates to: EHRVVLGVAGHRRDR*RRVMRRGRTRANGR
Trigger: TCTACCATTGGCTCGAGTCCGACCCCTCCTCATCACACGCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 90 bp GGGAATGGGTGGTGTGGCAACACCTGGGGGAGTCTGAGATCTTCCTaGACTGCCTGGCGATTTAGATCCACCTGTACTGGTAGGTGGGGT +
Preference number: 1 (lower is better)
Translates to: GNGWCGNTWGSLRSS*TAWRFRSTCTGRWG
Trigger: ACCCCACCTACCAGTACAGGTGGATCTAAATCGCCAGGCAGTGCAGGAAGATCTCAGACTCCCCCAGGTGTTGCCACACCACCCATTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATaGTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTT +
Preference number: 1 (lower is better)
Translates to: PSSGSSPPGPLVTTP*FSLSMTAVKDGFLF
Trigger: AAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp AGTGGTACCACTCATTGGGTTGTTGCCTGTGGTCATGCCATACCCTaGGCTGCTAGCCGGGGGCAGGTTCTTTTTCACCATGTCTTCAAC +
Preference number: 1 (lower is better)
Translates to: SGTTHWVVACGHAIP*AASRGQVLFHHVFN
Trigger: GTTGAAGACATGGTGAAAAAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp TGGTTGTGGGTAAGTTGTTGGGGGAGTGCTACACTGGCTTGGAGCTaGAGTGATGTGTGGCGTATCCAGCGTGTCAGCTGTCATGTTGAC +
Preference number: 1 (lower is better)
Translates to: WLWVSCWGSATLAWS*SDVWRIQRVSCHVD
Trigger: GTCAACATGACAGCTGACACGCTGGATACGCCACACATCACTCCAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTTACCCACAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp AGGTACTGGTTGTGGGTAAGTTGTTGGGGGAGTGCTACACTGGCTTaGAGCTGGAGTGATGTGTGGCGTATCCAGCGTGTCAGCTGTCAT +
Preference number: 1 (lower is better)
Translates to: RYWLWVSCWGSATLA*SWSDVWRIQRVSCH
Trigger: ATGACAGCTGACACGCTGGATACGCCACACATCACTCCAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTTACCCACAACCAGTACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp TCGGACCATCCTTTGAATACTGGGTTGGGGGTGAGGTACTGGTTGTaGGTAAGTTGTTGGGGGAGTGCTACACTGGCTTGGAGCTGGAGT +
Preference number: 1 (lower is better)
Translates to: SDHPLNTGLGVRYWL*VSCWGSATLAWSWS
Trigger: ACTCCAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTTACCCACAACCAGTACCTCACCCCCAACCCAGTATTCAAAGGATGGTCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp TCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTaGATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGG +
Preference number: 1 (lower is better)
Translates to: SSTVSAMRDSAGVSA*MVSAFLRIALIVTG
Trigger: CCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp AAATCCTGGGCAGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGTGGCGGCGTG +
Preference number: 1 (lower is better)
Translates to: KSWAGLSLRRFMSIG*FLVLPAIEETGGGV
Trigger: CACGCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCTGCCCAGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp GGCCAATGCTGTCTGAACTGGATAGTCGGACCATCCTTTGAATACTaGGTTGGGGGTGAGGTACTGGTTGTGGGTAAGTTGTTGGGGGAG +
Preference number: 1 (lower is better)
Translates to: GQCCLNWIVGPSFEY*VGGEVLVVGKLLGE
Trigger: CTCCCCCAACAACTTACCCACAACCAGTACCTCACCCCCAACCCAGTATTCAAAGGATGGTCCGACTATCCAGTTCAGACAGCATTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp TTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTaGGGGGTATATGCTGGTGACTTACTATGGCTGGGAGAGCCACGC +
Preference number: 1 (lower is better)
Translates to: FSAMEEPDSLSLSRF*GVYAGDLLWLGEPR
Trigger: GCGTGGCTCTCCCAGCCATAGTAAGTCACCAGCATATACCCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp ATAGTGATTTTGGGAATGGGTGGTGTGGCAACACCTGGGGGAGTCTaGGATCTTCCTGCACTGCCTGGCGATTTAGATCCACCTGTACTG +
Preference number: 1 (lower is better)
Translates to: IVILGMGGVATPGGV*DLPALPGDLDPPVL
Trigger: CAGTACAGGTGGATCTAAATCGCCAGGCAGTGCAGGAAGATCTCAGACTCCCCCAGGTGTTGCCACACCACCCATTCCCAAAATCACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp AGTTGTTGGGGGAGTGCTACACTGGCTTGGAGCTGGAGTGATGTGTaGCGTATCCAGCGTGTCAGCTGTCATGTTGACATCAAAGATAGG +
Preference number: 1 (lower is better)
Translates to: SCWGSATLAWSWSDV*RIQRVSCHVDIKDR
Trigger: CCTATCTTTGATGTCAACATGACAGCTGACACGCTGGATACGCCACACATCACTCCAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp GCTGGGAGAGCCACGCTCATGCTTTGGAGTGGAACCACTGATGAGTaGAGAGCCATAGTTTTTAGAAGAAGCCATTTGAGGCCTAAGCCC +
Preference number: 1 (lower is better)
Translates to: AGRATLMLWSGTTDE*RAIVFRRSHLRPKP
Trigger: GGGCTTAGGCCTCAAATGGCTTCTTCTAAAAACTATGGCTCTCCACTCATCAGTGGTTCCACTCCAAAGCATGAGCGTGGCTCTCCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp AGGAATCTGAATAGTGATTTTGGGAATGGGTGGTGTGGCAACACCTaGGGGAGTCTGAGATCTTCCTGCACTGCCTGGCGATTTAGATCC +
Preference number: 1 (lower is better)
Translates to: RNLNSDFGNGWCGNT*GSLRSSCTAWRFRS
Trigger: GGATCTAAATCGCCAGGCAGTGCAGGAAGATCTCAGACTCCCCCAGGTGTTGCCACACCACCCATTCCCAAAATCACTATTCAGATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp CCACACACACCAGGGAGTCATTCACAGGGTGCTGAAAAGATACGCTaGAACGAGACTCTGAGAGAGGACACACTTCAAATTGGAGAAGCC +
Preference number: 1 (lower is better)
Translates to: PHTPGSHSQGAEKIR*NETLREDTLQIGEA
Trigger: GGCTTCTCCAATTTGAAGTGTGTCCTCTCTCAGAGTCTCGTTTCAGCGTATCTTTTCAGCACCCTGTGAATGACTCCCTGGTGTGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp CAGTGCATCCGACAGCCCTTTGTAGAGTTTACAGCTCACATGTGTTaGGTCCTGCACATCCATTACCACACACACCAGGGAGTCATTCAC +
Preference number: 1 (lower is better)
Translates to: QCIRQPFVEFTAHMC*VLHIHYHTHQGVIH
Trigger: GTGAATGACTCCCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACTCTACAAAGGGCTGTCGGATGCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp CTTTTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTaGGGTGTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCT +
Preference number: 1 (lower is better)
Translates to: LFHHVFNCLCNEGQC*GVGLNGFSFPPNSP
Trigger: AGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp GAGGAGGAAGATGCCGTACAGGAATTAGATGATGGGGGAGTTTTCTaGGACAACGAGCCTGAGGATCCTAACCCTGAAGATGACTTCATG +
Preference number: 1 (lower is better)
Translates to: EEEDAVQELDDGGVF*DNEPEDPNPEDDFM
Trigger: CATGAAGTCATCTTCAGGGTTAGGATCCTCAGGCTCGTTGTCCCAGAAAACTCCCCCATCATCTAATTCCTGTACGGCATCTTCCTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp TGCACATCCATTACCACACACACCAGGGAGTCATTCACAGGGTGCTaGAAAGATACGCTGAAACGAGACTCTGAGAGAGGACACACTTCA +
Preference number: 1 (lower is better)
Translates to: CTSITTHTRESFTGC*KDTLKRDSERGHTS
Trigger: TGAAGTGTGTCCTCTCTCAGAGTCTCGTTTCAGCGTATCTTTTCAGCACCCTGTGAATGACTCCCTGGTGTGTGTGGTAATGGATGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp CCACCTGTACTGGTAGGTGGGGTAAAAGGTCTGTTAGAAGAACTATaGGATGGAGACTTTCCCTCAGTGTCTGCCTTCTTCCGCTTTGGA +
Preference number: 1 (lower is better)
Translates to: PPVLVGGVKGLLEEL*DGDFPSVSAFFRFG
Trigger: TCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTTACCCCACCTACCAGTACAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 90 bp GTTCTTTTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTaGTGGGGTGTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGC +
Preference number: 1 (lower is better)
Translates to: VLFHHVFNCLCNEGQ*WGVGLNGFSFPPNS
Trigger: GCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAAAAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp GTTGTGCTGGGGACCATGCCCCATCCCGCTGATACAGATCCTGAATaGAATAATCAGGAATGGCACAGTGCAGGTGTCAATATCAAAGTA +
Preference number: 1 (lower is better)
Translates to: VVLGTMPHPADTDPE*NNQEWHSAGVNIKV
Trigger: TACTTTGATATTGACACCTGCACTGTGCCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCCCAGCACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 90 bp TGTCTGAAAGGATGTCAGTTACATCTGGGCCAATGCTGTCTGAACTaGATAGTCGGACCATCCTTTGAATACTGGGTTGGGGGTGAGGTA +
Preference number: 1 (lower is better)
Translates to: CLKGCQLHLGQCCLN*IVGPSFEYWVGGEV
Trigger: TACCTCACCCCCAACCCAGTATTCAAAGGATGGTCCGACTATCCAGTTCAGACAGCATTGGCCCAGATGTAACTGACATCCTTTCAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp GGAGTCATTCACAGGGTGCTGAAAAGATACGCTGAAACGAGACTCTaGGAGAGGACACACTTCAAATTGGAGAAGCCCAGGAGAATCTTC +
Preference number: 1 (lower is better)
Translates to: GVIHRVLKRYAETRL*ERTHFKLEKPRRIF
Trigger: GAAGATTCTCCTGGGCTTCTCCAATTTGAAGTGTGTCCTCTCTCAGAGTCTCGTTTCAGCGTATCTTTTCAGCACCCTGTGAATGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp TGTACTGGTAGGTGGGGTAAAAGGTCTGTTAGAAGAACTATGAGATaGAGACTTTCCCTCAGTGTCTGCCTTCTTCCGCTTTGGAGGCTT +
Preference number: 1 (lower is better)
Translates to: CTGRWGKRSVRRTMR*RLSLSVCLLPLWRL
Trigger: AAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTTACCCCACCTACCAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp TCTTCCTGCACTGCCTGGCGATTTAGATCCACCTGTACTGGTAGGTaGGGTAAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCC +
Preference number: 1 (lower is better)
Translates to: SSCTAWRFRSTCTGR*GKRSVRRTMRWRLS
Trigger: GGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTTACCCCACCTACCAGTACAGGTGGATCTAAATCGCCAGGCAGTGCAGGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp TCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTaGGACTATTCTGATAAGATTTCTCTGCTATGGAGGAGCCTGACT +
Preference number: 1 (lower is better)
Translates to: SLCCILEVVGYHRLS*DYSDKISLLWRSLT
Trigger: AGTCAGGCTCCTCCATAGCAGAGAAATCTTATCAGAATAGTCCCAGCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp CCTGAAGATGACTTCATGCCAGAGCTTGAACTAGTTCCAGACATATaGGAACCACCAGAACCTGAACTGATAGGGGACTTGGCTTTAGAG +
Preference number: 1 (lower is better)
Translates to: PEDDFMPELELVPDI*EPPEPELIGDLALE
Trigger: CTCTAAAGCCAAGTCCCCTATCAGTTCAGGTTCTGGTGGTTCTCATATGTCTGGAACTAGTTCAAGCTCTGGCATGAAGTCATCTTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp TGGCACAGTGCAGGTGTCAATATCAAAGTAAGGCCGCAGAATTTTTaGGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAAC +
Preference number: 1 (lower is better)
Translates to: WHSAGVNIKVRPQNF*EDPPNTENFCCTRN
Trigger: GTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCTGCGGCCTTACTTTGATATTGACACCTGCACTGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 90 bp CTTCTTCTGCAATGTCTGAAAGGATGTCAGTTACATCTGGGCCAATaGTGTCTGAACTGGATAGTCGGACCATCCTTTGAATACTGGGTT +
Preference number: 1 (lower is better)
Translates to: LLLQCLKGCQLHLGQ*CLNWIVGPSFEYWV
Trigger: AACCCAGTATTCAAAGGATGGTCCGACTATCCAGTTCAGACAGCATTGGCCCAGATGTAACTGACATCCTTTCAGACATTGCAGAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp ATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATaGCACAGTGCAGGTGTCAATATCAAAGTAAGGCCGCAGAATTTT +
Preference number: 1 (lower is better)
Translates to: MPHPADTDPEWNNQE*HSAGVNIKVRPQNF
Trigger: AAAATTCTGCGGCCTTACTTTGATATTGACACCTGCACTGTGCCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 90 bp GCTTTGCCGGCTACTGAAATAATACTGAAATCAACTGTGTCGGCTTaGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGC +
Preference number: 1 (lower is better)
Translates to: ALPATEIILKSTVSA*LLPLNLVSPLSPPS
Trigger: GCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGACACAGTTGATTTCAGTATTATTTCAGTAGCCGGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp ATTTCAAGAAGAAACAGGCAGGAAGATCAACACTGTTGGCACTGGTaGTTGAGGAGAAGGAAGGGGTCCATTTATTGTCAACTGGATGTG +
Preference number: 1 (lower is better)
Translates to: ISRRNRQEDQHCWHW*LRRRKGSIYCQLDV
Trigger: CACATCCAGTTGACAATAAATGGACCCCTTCCTTCTCCTCAATCACCAGTGCCAACAGTGTTGATCTTCCTGCCTGTTTCTTCTTGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp CCATTATCACCTCCAAGCATTGGCACCCCCAAAGTATTTAGTGCCTaGGATGCAAATCCTTTGAAATCATCATTATCCCCACTTTGGCTG +
Preference number: 1 (lower is better)
Translates to: PLSPPSIGTPKVFSA*DANPLKSSLSPLWL
Trigger: CAGCCAAAGTGGGGATAATGATGATTTCAAAGGATTTGCATCTCAGGCACTAAATACTTTGGGGGTGCCAATGCTTGGAGGTGATAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 90 bp GTCTGGATATGCCTTTCTAATTCACCCAGCTTGATGTCAAAGCCATaGCATTTAGGATTCTTAACCAAATCAGACCTGTCTGACTCACCC +
Preference number: 1 (lower is better)
Translates to: VWICLSNSPSLMSKP*HLGFLTKSDLSDSP
Trigger: GGGTGAGTCAGACAGGTCTGATTTGGTTAAGAATCCTAAATGGCATGGCTTTGACATCAAGCTGGGTGAATTAGAAAGGCATATCCAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 90 bp AAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTCATaGTCACCTAGCATTCCAGGCCCCCATTACTTCAAAAGTGAGCTT +
Preference number: 1 (lower is better)
Translates to: KGPIGLLHSSKGLSS*SPSIPGPHYFKSEL
Trigger: AAGCTCACTTTTGAAGTAATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 90 bp AGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGGCTTATCTTTGCTTTTCCCATCATT +
Preference number: 1 (lower is better)
Translates to: RSVRRTMRWRLSLSV*LLPLWRLIFAFPII
Trigger: AATGATGGGAAAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp GTCCAGCTCTTAGGAATGGCATCAGTTCTCCTGCAAACAAAATGCTaGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTA +
Preference number: 1 (lower is better)
Translates to: VQLLGMASVLLQTKC*DADFWHIVEVGELL
Trigger: TAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAGGAGAACTGATGCCATTCCTAAGAGCTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 90 bp CCAGACTGGGATGAATTTTTGGACTGGCTAGATCCAGAAGACCCCTaGCTAGAATACATACTGCTACTTAACTTGGAACTTGATGAACCT +
Preference number: 1 (lower is better)
Translates to: PDWDEFLDWLDPEDP*LEYILLLNLELDEP
Trigger: AGGTTCATCAAGTTCCAAGTTAAGTAGCAGTATGTATTCTAGCCAGGGGTCTTCTGGATCTAGCCAGTCCAAAAATTCATCCCAGTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp AAACTAGGTGACAAACTCATGAGAAATCCAACCTGGCTGAATGTCTaGGAGGCTGCTACTGTATCAACATCACAAGATAAAGCACTCTGG +
Preference number: 1 (lower is better)
Translates to: KLGDKLMRNPTWLNV*EAATVSTSQDKALW
Trigger: CCAGAGTGCTTTATCTTGTGATGTTGATACAGTAGCAGCCTCTCAGACATTCAGCCAGGTTGGATTTCTCATGAGTTTGTCACCTAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 90 bp GATTCAAAGGTATGGGGTCAGGGTCCTTTGATAGCTCAAACTGAGTaGTCAGTTCATACAGGGGTGCATAAGTTGGTTGAGTTTCAAACA +
Preference number: 1 (lower is better)
Translates to: DSKVWGQGPLIAQTE*SVHTGVHKLVEFQT
Trigger: TGTTTGAAACTCAACCAACTTATGCACCCCTGTATGAACTGATCACTCAGTTTGAGCTATCAAAGGACCCTGACCCCATACCTTTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp TTCATTGGAGAGGCAAGCTTGTCAGAGCCTCCAGGTGGCCTTGAATaGGAAGGGGATATGTTTGGTTTACTTAAAGAAGGATTCATAAGT +
Preference number: 1 (lower is better)
Translates to: FIGEASLSEPPGGLE*EGDMFGLLKEGFIS
Trigger: ACTTATGAATCCTTCTTTAAGTAAACCAAACATATCCCCTTCTCATTCAAGGCCACCTGGAGGCTCTGACAAGCTTGCCTCTCCAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp GTGGAAACCTTTGATTTGTCTTTATCACTTTTCTCACGCTTGCCCTaGAACTCTCCTCCTGACATGTTATGTTTGGAGGACATAGGATGG +
Preference number: 1 (lower is better)
Translates to: VETFDLSLSLFSRLP*NSPPDMLCLEDIGW
Trigger: CCATCCTATGTCCTCCAAACATAACATGTCAGGAGGAGAGTTTCAGGGCAAGCGTGAGAAAAGTGATAAAGACAAATCAAAGGTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 90 bp GCTCTTAGGAATGGCATCAGTTCTCCTGCAAACAAAATGCTGGGATaGAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTAATCCT +
Preference number: 1 (lower is better)
Translates to: ALRNGISSPANKMLG*RLLAHCGSRRTINP
Trigger: AGGATTAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAGGAGAACTGATGCCATTCCTAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 90 bp ACATACTGCTACTTAACTTGGAACTTGATGAACCTTCTGATTTACTaGTTTTCATCTTCCCTGAGGTGGAAGCAGATGAGGAAGAGGAGG +
Preference number: 1 (lower is better)
Translates to: TYCYLTWNLMNLLIY*FSSSLRWKQMRKRR
Trigger: CCTCCTCTTCCTCATCTGCTTCCACCTCAGGGAAGATGAAAAGCAGTAAATCAGAAGGTTCATCAAGTTCCAAGTTAAGTAGCAGTATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp TTCCTGGTAACCAGAATCAAACCCTGTGGTTTCTTTAATAGGGTCTaGATATGCCTTTCTAATTCACCCAGCTTGATGTCAAAGCCATGC +
Preference number: 1 (lower is better)
Translates to: FLVTRIKPCGFFNRV*ICLSNSPSLMSKPC
Trigger: GCATGGCTTTGACATCAAGCTGGGTGAATTAGAAAGGCATATCCAGACCCTATTAAAGAAACCACAGGGTTTGATTCTGGTTACCAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 90 bp TGTGCAGTTCTGCAGTTTCTGAACAAATGCTCTAGATACTGGGATTaGCTGGGGAAATTTCAAGAAGAAACAGGCAGGAAGATCAACACT +
Preference number: 1 (lower is better)
Translates to: CAVLQFLNKCSRYWD*LGKFQEETGRKINT
Trigger: AGTGTTGATCTTCCTGCCTGTTTCTTCTTGAAATTTCCCCAGCCAATCCCAGTATCTAGAGCATTTGTTCAGAAACTGCAGAACTGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 90 bp AATTCCTGTGCAGTTCTGCAGTTTCTGAACAAATGCTCTAGATACTaGGATTGGCTGGGGAAATTTCAAGAAGAAACAGGCAGGAAGATC +
Preference number: 1 (lower is better)
Translates to: NSCAVLQFLNKCSRY*DWLGKFQEETGRKI
Trigger: GATCTTCCTGCCTGTTTCTTCTTGAAATTTCCCCAGCCAATCCCAGTATCTAGAGCATTTGTTCAGAAACTGCAGAACTGCACAGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp GTGATTAAAGTTTGGACTCCTTCTCCTTGTGATGAAGAGAAACAGTaGGTCCAGCTCTTAGGAATGGCATCAGTTCTCCTGCAAACAAAA +
Preference number: 1 (lower is better)
Translates to: VIKVWTPSPCDEEKQ*VQLLGMASVLLQTK
Trigger: TTTTGTTTGCAGGAGAACTGATGCCATTCCTAAGAGCTGGACTCACTGTTTCTCTTCATCACAAGGAGAAGGAGTCCAAACTTTAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 90 bp TTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTaGAGGGCTCTTATTGATGTCCCCCAGAATCCAGACTCAGACCTA +
Preference number: 1 (lower is better)
Translates to: FCCTRNSLLDFYIFM*RALIDVPQNPDSDL
Trigger: TAGGTCTGAGTCTGGATTCTGGGGGACATCAATAAGAGCCCTTCACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 90 bp TTTGTCTTTATCACTTTTCTCACGCTTGCCCTGAAACTCTCCTCCTaGCATGTTATGTTTGGAGGACATAGGATGGCTGGAAGAATTTGT +
Preference number: 1 (lower is better)
Translates to: FVFITFLTLALKLSS*HVMFGGHRMAGRIC
Trigger: ACAAATTCTTCCAGCCATCCTATGTCCTCCAAACATAACATGTCAGGAGGAGAGTTTCAGGGCAAGCGTGAGAAAAGTGATAAAGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 90 bp AGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGTTaGTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTC +
Preference number: 1 (lower is better)
Translates to: RIQTQTYFSKKVQLG*YIVARVYLHAHLAF
Trigger: GAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 90 bp ACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTaGATTTCTATATTTTTATGTGAAGGGCTCTTATTGATGTCCCCC +
Preference number: 1 (lower is better)
Translates to: TLQILRTSVALETVS*ISIFLCEGLLLMSP
Trigger: GGGGGACATCAATAAGAGCCCTTCACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 90 bp TATCAAAGTAAGGCCGCAGAATTTTTGAGAGGACCCTCCAAATACTaGGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATAT +
Preference number: 1 (lower is better)
Translates to: YQSKAAEFLRGPSKY*ELLLHSKQSPGFLY
Trigger: ATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCTGCGGCCTTACTTTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 90 bp GTAACCAGAATCAAACCCTGTGGTTTCTTTAATAGGGTCTGGATATaGCTTTCTAATTCACCCAGCTTGATGTCAAAGCCATGCCATTTA +
Preference number: 1 (lower is better)
Translates to: VTRIKPCGFFNRVWI*LSNSPSLMSKPCHL
Trigger: TAAATGGCATGGCTTTGACATCAAGCTGGGTGAATTAGAAAGGCATATCCAGACCCTATTAAAGAAACCACAGGGTTTGATTCTGGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 90 bp GTCAAAGCCATGCCATTTAGGATTCTTAACCAAATCAGACCTGTCTaGCTCACCCCTTATGGTGGTTTGCCTATAAACTTATCAATAGTT +
Preference number: 1 (lower is better)
Translates to: VKAMPFRILNQIRPV*LTPYGGLPINLSIV
Trigger: AACTATTGATAAGTTTATAGGCAAACCACCATAAGGGGTGAGTCAGACAGGTCTGATTTGGTTAAGAATCCTAAATGGCATGGCTTTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 90 bp TTTCGTATACTGACATCTTTAAGTGACTCAACTGTGGATACTGTATaGCTCACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATT +
Preference number: 1 (lower is better)
Translates to: FRILTSLSDSTVDTV*LTGSLKGLLRIHDI
Trigger: AATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGTGAGTCATACAGTATCCACAGTTGAGTCACTTAAAGATGTCAGTATACGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
3UTR TCA 90 bp TGCAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTaGTGCATTCATGCCCAAAGATCGAGAAACATTATTCTCATGCAA +
Preference number: 1 (lower is better)
Translates to: CNWEFVHSRCSFNCH*CIHAQRSRNIILMQ
Trigger: TTGCATGAGAATAATGTTTCTCGATCTTTGGGCATGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 90 bp TTTCCTACATCTTATTACCTTGGGACACAAAAGTGGCAGAGTTGTTaGGAGCTGATGACAATAAAAAGGAGAACACTAGAGGAAATGAGA +
Preference number: 1 (lower is better)
Translates to: FPTSYYLGTQKWQSC*ELMTIKRRTLEEMR
Trigger: TCTCATTTCCTCTAGTGTTCTCCTTTTTATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGTGTCCCAAGGTAATAAGATGTAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 90 bp TCTTGCTCCACTTTACAATGTTTTGTTTCCTACATCTTATTACCTTaGGACACAAAAGTGGCAGAGTTGTTGAGAGCTGATGACAATAAA +
Preference number: 1 (lower is better)
Translates to: SCSTLQCFVSYILLP*DTKVAELLRADDNK
Trigger: TTTATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGTGTCCCAAGGTAATAAGATGTAGGAAACAAAACATTGTAAAGTGGAGCAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp CCCGGAAAGGTGTTGGTTGGTGTAGTGGTACCACTCATTGGGTTGTaGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: PGKVLVGVVVPLIGL*PVVMPYPGLLAGGR
Trigger: CCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACACCTTTCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTTGCAATGAGGGACAGTaGTGGGGTGTCGGCTTGAAT +
Preference number: 2 (lower is better)
Translates to: VVACGHAIPWAASRGQVLCNEGQ*WGVGLN
Trigger: ATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCA...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTATGACCCCCACTCCTTaGTGTGAGATAGCCAACACT +
Preference number: 2 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSMTPTP*CEIANT
Trigger: AGTGTTGGCTATCTCACACCAAGGAGTGGGGGTCAT...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTGAGGAAGAATGGCTATaGTGGCTTTTGCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSEEEWL*WLLLPE
Trigger: CTCAGGCAGCAAAAGCCACCATAGCCATTCTTCCTC...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCTTGGGTTGTTGCCTGTaGTCATGCCATACCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSLGCCL*SCHTLG
Trigger: GCCCAGGGTATGGCATGACCACAGGCAACAACCCAA...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCCTCCCATGCTGGTTCTaGGAGGATGACATGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSLPCWF*EDDMEE
Trigger: CTCTTCCATGTCATCCTCTCAGAACCAGCATGGGAG...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCTGTGAGAGGAAGGCTTaGCCACCATCACTGTTCCCT +
Preference number: 2 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSCERKA*PPSLFP
Trigger: AGGGAACAGTGATGGTGGGCAAGCCTTCCTCTCACA...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTGGACACACTTCAAATTaGAGAAGCCCAGGAGAATCT +
Preference number: 2 (lower is better)
Translates to: VVACGHAIPWAASRGQVLGHTSN*RSPGES
Trigger: AGATTCTCCTGGGCTTCTCCAATTTGAAGTGTGTCC...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCTTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCC +
Preference number: 2 (lower is better)
Translates to: PELIGDLALEDGGVPGTGFMSIG*FLVLPA
Trigger: GGCCGGCAACACCAAGAACCACCCGATGCTCATGAA...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp GTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTaGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGG +
Preference number: 2 (lower is better)
Translates to: VFNCLCNEGQCWGVG*NGFSFPPNSPHRHR
Trigger: CCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGCTAATTCACCCAGCTTaGTGTCAAAGCCATGCCATT +
Preference number: 2 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKLIHPA*CQSHAI
Trigger: AATGGCATGGCTTTGACATCAAGCTGGGTGAATTAG...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR TCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCGGGTCAGTGTGGGGGTaGGCCCATCGACAATTCAGG +
Preference number: 2 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPGSVWG*AHRQFR
Trigger: CCTGAATTGTCGATGGGCTCACCCCCACACTGACCC...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
3UTR-3UTR TCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCAGAACCACCAGAACCTaGACTGATAGGGGACTTGGC +
Preference number: 2 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSRTTRT*TDRGLG
Trigger: GCCAAGTCCCCTATCAGTTCAGGTTCTGGTGGTTCT...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTCAGTTCATACAGGGGTaGATAAGTTGGTTGAGTTTC +
Preference number: 2 (lower is better)
Translates to: VVACGHAIPWAASRGQVLQFIQG*ISWLSF
Trigger: GAAACTCAACCAACTTATGCACCCCTGTATGAACTG...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGGGTGGTTCTTGGTGTTaGCGGCCATCGAAGAGACAG +
Preference number: 2 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGGGSWC*RPSKRQ
Trigger: CTGTCTCTTCGATGGCCGGCAACACCAAGAACCACC...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACACATTTTGGTATTTGTTaGCCCTGCATGGGGGAGCTG +
Preference number: 2 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTHFGIC*PCMGEL
Trigger: CAGCTCCCCCATGCAGGGCCAACAAATACCAAAATG...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp GACTTTCCCTCAGTGTCTGCCTTCTTCCGCTTTGGAGGCTTATCTTaGCTTTTCCCATCATTAGAAGGGGTCCGACTGCGCTTCCCTGGT +
Preference number: 2 (lower is better)
Translates to: DFPSVSAFFRFGGLS*LFPSLEGVRLRFPG
Trigger: ACCAGGGAAGCGCAGTCGGACCCCTTCTAATGATGGGAAAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACGCTGGGGTGTCGGCTTaGATGGTTTCAGCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNAGVSA*MVSAFL
Trigger: GAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGC...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGGCCTCCAGGTGGCCTTaGATGAGAAGGGGATATGTT +
Preference number: 2 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGASRWP*MRRGYV
Trigger: AACATATCCCCTTCTCATTCAAGGCCACCTGGAGGC...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCCGTACAGGAATTAGATaGTGGGGGAGTTTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSRTGIR*WGSFLG
Trigger: TCCCAGAAAACTCCCCCATCATCTAATTCCTGTACG...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCGCTTCAGTTTATCTATaGCAGCTGTCAAGGACGGCT +
Preference number: 2 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSASVYL*QLSRTA
Trigger: AGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGC...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCGGGTGTCGGCTTGAATaGTTTCAGCTTTCCTCCGAA +
Preference number: 2 (lower is better)
Translates to: MEEFQEQASLERQACQSLGCRLE*FQLSSE
Trigger: TTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCC...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGG +
Preference number: 2 (lower is better)
Translates to: VGLVIALKLGLPIITSKHHRRDR*RRVMRR
Trigger: CCTCCTCATCACACGCCGCCACCTGTCTCTTCGATG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTTCCTTCATTTGCCCATaGCTCAAACGGACAACTACC +
Preference number: 2 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSSFICP*LKRTTT
Trigger: GGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGA...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR TCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCACTGTTGGCACTGGTaGTTGAGGAGAAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: VGLVIALKLGLPIITSKHHCWHW*LRRRKG
Trigger: CCCCTTCCTTCTCCTCAATCACCAGTGCCAACAGTG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCGCTGAAACGAGACTCTaGGAGAGGACACACTTCAAA +
Preference number: 2 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSAETRL*ERTHFK
Trigger: TTTGAAGTGTGTCCTCTCTCAGAGTCTCGTTTCAGC...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGAATCTCGAAGAGGGGTaGCAATGGCTGGGCAATCAT +
Preference number: 2 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGNLEEG*QWLGNH
Trigger: ATGATTGCCCAGCCATTGGCACCCCTCTTCGAGATT...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCATAGCTCAAACTGAGTaGTCAGTTCATACAGGGGTG +
Preference number: 2 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGIAQTE*SVHTGV
Trigger: CACCCCTGTATGAACTGATCACTCAGTTTGAGCTAT...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATACAGCTCACATGTGTTaGGTCCTGCACATCCATTAC +
Preference number: 2 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDTAHMC*VLHIHY
Trigger: GTAATGGATGTGCAGGACTCAACACATGTGAGCTGT...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGCCACCATATAAGCCTTaGTCTTCGGCCTTCCATCAT +
Preference number: 2 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWPPYKP*SSAFHH
Trigger: ATGATGGAAGGCCGAAGAGCAAGGCTTATATGGTGG...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR GCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTAAGGGTTTATCTTCATaGTCACCTAGCATTCCAGGC +
Preference number: 2 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSKGLSS*SPSIPG
Trigger: GCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTT...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR GCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCTTACATCTGGGCCAATaGTGTCTGAACTGGATAGTC +
Preference number: 2 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSLHLGQ*CLNWIV
Trigger: GACTATCCAGTTCAGACAGCATTGGCCCAGATGTAA...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp AGGATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCAAGACACAGAACCACTaGTGGTATACTGACTGTGAG +
Preference number: 2 (lower is better)
Translates to: RMEEFQEQASLERQACQSKTQNH*WYTDCE
Trigger: CTCACAGTCAGTATACCAGCAGTGGTTCTGTGTCTT...GCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCATCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAAAATGCAGTGCTCCCTaGTTCTCAGGCAGGGTGAAG +
Preference number: 2 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPKCSAP*FSGRVK
Trigger: CTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTT...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
3UTR-3UTR CCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCACCTGTACTGGTAGGTaGGGTAAAAGGTCTGTTAGA +
Preference number: 2 (lower is better)
Translates to: PELIGDLALEDGGVPGTGTCTGR*GKRSVR
Trigger: TCTAACAGACCTTTTACCCCACCTACCAGTACAGGT...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGATTTTGGGAATGGGTaGTGTGGCAACACCTGGGGG +
Preference number: 2 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSDFGNG*CGNTWG
Trigger: CCCCCAGGTGTTGCCACACCACCCATTCCCAAAATC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp TCAGTGCATCCGACAGCCCTTTGTAGAGTTTACAGCTCACATGTGTaGAGTCCTGCACATCCATTACCACACACACCAGGGAGTCATTCA +
Preference number: 2 (lower is better)
Translates to: SVHPTALCRVYSSHV*SPAHPLPHTPGSHS
Trigger: TGAATGACTCCCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACTCTACAAAGGGCTGTCGGATGCACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCCCCCACTCCTTGGTGTaGGATAGCCAACACTTCCAT +
Preference number: 2 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSPHSLV*DSQHFH
Trigger: ATGGAAGTGTTGGCTATCTCACACCAAGGAGTGGGG...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCACTCGGCCAGGGTGCTaGAAGGTGATTTTGCTAACA +
Preference number: 2 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGTRPGC*KVILLT
Trigger: TGTTAGCAAAATCACCTTTCAGCACCCTGGCCGAGT...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp AGGATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTGTTAGAAGAACTATaGGATGGAGACTTTCCCTCA +
Preference number: 2 (lower is better)
Translates to: RMEEFQEQASLERQACQSLLEEL*DGDFPS
Trigger: TGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAG...GCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTGCTATGGAGGAGCCTaGCTCACTTTCACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSCYGGA*LTFTVQ
Trigger: CTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACATCTGTGCAGATCAGTaGATCCGACAGCCCTTTGTA +
Preference number: 2 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNICADQ*IRQPFV
Trigger: TACAAAGGGCTGTCGGATGCACTGATCTGCACAGAT...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCGTCTTCAACTGTCTCTaGAATGAGGGACAGTGCTGG +
Preference number: 2 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGVFNCL*NEGQCW
Trigger: CCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGAC...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCCTTTCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGG +
Preference number: 2 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSLSLSV*LLPLWR
Trigger: CCTCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAG...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATTTGGGGGTGAGGTACTaGTTGTGGGTAAGTTGTTGG +
Preference number: 2 (lower is better)
Translates to: VGLVIALKLGLPIITSKHLGVRY*LWVSCW
Trigger: CCAACAACTTACCCACAACCAGTACCTCACCCCCAA...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCTTTGATAGCTCAAACTaGGTGATCAGTTCATACAGG +
Preference number: 2 (lower is better)
Translates to: PELIGDLALEDGGVPGTGFDSSN*VISSYR
Trigger: CCTGTATGAACTGATCACTCAGTTTGAGCTATCAAA...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCCCAGGTGGCCTTGAATaGGAAGGGGATATGTTTGGT +
Preference number: 2 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSPGGLE*EGDMFG
Trigger: ACCAAACATATCCCCTTCTCATTCAAGGCCACCTGG...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCTCACTGATGCATTCATaGCCAAAGATCGAGAAACAT +
Preference number: 2 (lower is better)
Translates to: PELIGDLALEDGGVPGTGSLMHS*PKIEKH
Trigger: ATGTTTCTCGATCTTTGGGCATGAATGCATCAGTGA...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCACAATGGAATTCCTGTaGAGTTCTGCAGTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: MEEFQEQASLERQACQSLTMEFL*SSAVSE
Trigger: TTCAGAAACTGCAGAACTGCACAGGAATTCCATTGT...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCCACTTTTCTCACGCTTaGCCTGAAACTCTCCTCCTG +
Preference number: 2 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSHFSHA*PETLLL
Trigger: CAGGAGGAGAGTTTCAGGGCAAGCGTGAGAAAAGTG...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGGAGTGATTAAAGTTTaGACTCCTTCTCCTTGTGAT +
Preference number: 2 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSGVIKV*TPSPCD
Trigger: ATCACAAGGAGAAGGAGTCCAAACTTTAATCACTCC...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CCA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATTGTGATTCAAAGGTATaGGGTCAGGGTCCTTTGATA +
Preference number: 2 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDCDSKV*GQGPLI
Trigger: TATCAAAGGACCCTGACCCCATACCTTTGAATCACA...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCGGAAAGGTGTTGGTTaGTGTAGTGGTACCACTCAT +
Preference number: 2 (lower is better)
Translates to: VGLVIALKLGLPIITSKHRKGVG*CSGTTH
Trigger: ATGAGTGGTACCACTACACCAACCAACACCTTTCCG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCAGGGTTGAGAAATCCTaGGCAGGATTATCTTTAAGA +
Preference number: 2 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSRVEKS*AGLSLR
Trigger: TCTTAAAGATAATCCTGCCCAGGATTTCTCAACCCT...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTACACTGGCTTGGAGCTaGAGTGATGTGTGGCGTATC +
Preference number: 2 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSTLAWS*SDVWRI
Trigger: GATACGCCACACATCACTCCAGCTCCAAGCCAGTGT...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTTCCCTAAGTCCCCAGTaGTCAGTAAAGGACCCTGAC +
Preference number: 2 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSSLSPQ*SVKDPD
Trigger: GTCAGGGTCCTTTACTGACCACTGGGGACTTAGGGA...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp GGAGCTGGAGTGATGTGTGGCGTATCCAGCGTGTCAGCTGTCATGTaGACATCAAAGATAGGGTTCTGTGAGTCAACATCCATTGAAAAT +
Preference number: 2 (lower is better)
Translates to: GAGVMCGVSSVSAVM*TSKIGFCESTSIEN
Trigger: ATTTTCAATGGATGTTGACTCACAGAACCCTATCTTTGATGTCAACATGACAGCTGACACGCTGGATACGCCACACATCACTCCAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp CAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCCAGGTGGCCTaGAATGAGAAGGGGATATGTTTGGTTTACTTAAAGAAGGATTCA +
Preference number: 2 (lower is better)
Translates to: QASLERQACQSLQVA*NEKGICLVYLKKDS
Trigger: TGAATCCTTCTTTAAGTAAACCAAACATATCCCCTTCTCATTCAAGGCCACCTGGAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp ACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTaGTTTCTGCTGGGAGATTTTCCTTTAGAACTCCCATGCTGGTTC +
Preference number: 2 (lower is better)
Translates to: TPCFSLSMTAVKDGF*FLLGDFPLELPCWF
Trigger: GAACCAGCATGGGAGTTCTAAAGGAAAATCTCCCAGCAGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGAACAAAATGCTGGGATaGAGACTTTTGGCACATTGT +
Preference number: 2 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWNKMLG*RLLAHC
Trigger: ACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR GCA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTACTGAGAACTTCTGTTaGACTCGAAACAGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: FWYLLALHGGAEPMILFSTENFC*TRNSLL
Trigger: CAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAGT...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR GCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCGAATGTCTGAGAGGCTaGTACTGTATCAACATCACA +
Preference number: 2 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSECLRG*YCINIT
Trigger: TGTGATGTTGATACAGTAGCAGCCTCTCAGACATTC...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR GCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGACATGTGTTGAGTCCTaGACATCCATTACCACACAC +
Preference number: 2 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKTCVES*TSITTH
Trigger: GTGTGTGGTAATGGATGTGCAGGACTCAACACATGT...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTTGGCCCACCGACTCATaGCGATCTTTGATGCTCATG +
Preference number: 2 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLWPTDS*RSLMLM
Trigger: CATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCA...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTAAGTTGTTGGGGGAGTaGTACACTGGCTTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLKLLGE*YTGLEL
Trigger: CAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTT...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACAAGATAAAGCACTCTaGTATCACCTGCCCATATCC +
Preference number: 2 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPQDKAL*YHLPIS
Trigger: GGATATGGGCAGGTGATACCAGAGTGCTTTATCTTG...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATATGACTTCTTTTTCTTaGTCTTGTTGCTCCCCGAGC +
Preference number: 2 (lower is better)
Translates to: VGLVIALKLGLPIITSKHMTSFS*SCCSPS
Trigger: GCTCGGGGAGCAACAAGACCAAGAAAAAGAAGTCAT...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTCCATCCTTTGAATACTaGGTTGGGGGTGAGGTACTG +
Preference number: 2 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSPSFEY*VGGEVL
Trigger: CAGTACCTCACCCCCAACCCAGTATTCAAAGGATGG...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTTCTTCCTGCACTGCCTaGCGATTTAGATCCACCTGT +
Preference number: 2 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSSSCTA*RFRSTC
Trigger: ACAGGTGGATCTAAATCGCCAGGCAGTGCAGGAAGA...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGAAGAGGAGGAAGAATaGCTATGGTGGCTTTTGCTG +
Preference number: 2 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSEEEEE*LWWLLL
Trigger: CAGCAAAAGCCACCATAGCCATTCTTCCTCCTCTTC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp CCGGCTACTGAAATAATACTGAAATCAACTGTGTCGGCTTGGTTATaGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATTGGC +
Preference number: 2 (lower is better)
Translates to: PATEIILKSTVSAWL*PLNLVSPLSPPSIG
Trigger: GCCAATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGACACAGTTGATTTCAGTATTATTTCAGTAGCCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATTCCTTCAATTGTCACTaGTGCATTCATGCCCAAAGA +
Preference number: 2 (lower is better)
Translates to: VGLVIALKLGLPIITSKHSFNCH*CIHAQR
Trigger: TCTTTGGGCATGAATGCATCAGTGACAATTGAAGGA...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCACAAGGCCCTTAAGGTaGTTAGAAAATTCATCAAAA +
Preference number: 2 (lower is better)
Translates to: PELIGDLALEDGGVPGTGTRPLR*LENSSK
Trigger: TTTTGATGAATTTTCTAAGCACCTTAAGGGCCTTGT...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp ATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGTTGGGATGCAGACTTTTaGCACATTGTGGAAGTAGGA +
Preference number: 2 (lower is better)
Translates to: MSPRIQTQTYFSKKVQLGWDADF*HIVEVG
Trigger: TCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCA...ACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCAGGGGTGCATAAGTTaGTTGAGTTTCAAACAATGG +
Preference number: 2 (lower is better)
Translates to: VGLVIALKLGLPIITSKHQGCIS*LSFKQW
Trigger: CCATTGTTTGAAACTCAACCAACTTATGCACCCCTG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp TCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATaGGGTTGCTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTA +
Preference number: 2 (lower is better)
Translates to: SPRIQTQTYFSKKVQ*GCYIVARVYLHAHL
Trigger: TAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp ATAATACTGAAATCAACTGTGTCGGCTTGGTTATTGCCCTTAAACTaGGTCTCCCCATTATCACCTCCAAGCATTGGCACCCCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: IILKSTVSAWLLPLN*VSPLSPPSIGTPKV
Trigger: TACTTTGGGGGTGCCAATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGACACAGTTGATTTCAGTATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTTCTAAAGGCGGGCTCTaGCTAATTTGCTTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSSKGGL*LICLGL
Trigger: CAAGCCCAAGCAAATTAGTCAGAGCCCGCCTTTAGA...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR TCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTGTAAGAATTGGGTTCTaGGACACCTTGCTGAAGTCC +
Preference number: 2 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLVRIGF*DTLLKS
Trigger: GGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTAC...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGTGGCATCAGTTCTCCTaGAAACAAAATGCTGGGATG +
Preference number: 2 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLWHQFS*KQNAGM
Trigger: CATCCCAGCATTTTGTTTGCAGGAGAACTGATGCCA...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CCA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGCAGTTTGTTGTCCCCTaGAAGGTTATACAGATTAAC +
Preference number: 2 (lower is better)
Translates to: SLQLTCVESCTSITTHTRQFVVP*KVIQIN
Trigger: GTTAATCTGTATAACCTTCCAGGGGACAACAAACTG...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATGATACTGGGATTGGCTaGGGAAATTTCAAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: VGLVIALKLGLPIITSKHDTGIG*GNFKKK
Trigger: TTTCTTCTTGAAATTTCCCCAGCCAATCCCAGTATC...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGTCTAGATACTGGGATTaGCTGGGGAAATTTCAAGAA +
Preference number: 2 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKSRYWD*LGKFQE
Trigger: TTCTTGAAATTTCCCCAGCCAATCCCAGTATCTAGA...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTAGTGGTACCACTCATTaGGTTGTTGCCTGTGGTCAT +
Preference number: 2 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLSGTTH*VVACGH
Trigger: ATGACCACAGGCAACAACCCAATGAGTGGTACCACT...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTCAACTGTGTCGGCTTaGTTATTGCCCTTAAACTTG +
Preference number: 2 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSSTVSA*LLPLNL
Trigger: CAAGTTTAAGGGCAATAACCAAGCCGACACAGTTGA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR TCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCATTCAGGTTCATTAAATaGCCCCCACTCCTTGGTGTG +
Preference number: 2 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSFRFIK*PPLLGV
Trigger: CACACCAAGGAGTGGGGGTCATTTAATGAACCTGAA...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp CAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGTaGCTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATT +
Preference number: 2 (lower is better)
Translates to: QNPDSDLFLQKGPIG*LHSSKGLSSCSPSI
Trigger: AATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CCA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAAACTCACCCCTTATGGTaGTTTGCCTATAAACTTATC +
Preference number: 2 (lower is better)
Translates to: LQTKCWDADFWHIVEVGETHPLW*FAYKLI
Trigger: GATAAGTTTATAGGCAAACCACCATAAGGGGTGAGT...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp GCTCCCTACCACCATATAAGCCTTGCTCTTCGGCCTTCCATCATTTaGAACCCTAAACCTCATAGATTTAGAACGAAACACTGTATAAAA +
Preference number: 2 (lower is better)
Translates to: APYHHISLALRPSII*NPKPHRFRTKHCIK
Trigger: TTTTATACAGTGTTTCGTTCTAAATCTATGAGGTTTAGGGTTCAAAATGATGGAAGGCCGAAGAGCAAGGCTTATATGGTGGTAGGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp AATGGCATCAGTTCTCCTGCAAACAAAATGCTGGGATGCAGACTTTaGGCACATTGTGGAAGTAGGAGAACTATTAATCCTGTAATGGTT +
Preference number: 2 (lower is better)
Translates to: NGISSPANKMLGCRL*AHCGSRRTINPVMV
Trigger: AACCATTACAGGATTAATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAGGAGAACTGATGCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp TTGTCAACTGGATGTGACCCCATAATTAATGGTGCAATTGGGAGTTaGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCATG +
Preference number: 2 (lower is better)
Translates to: LSTGCDPIINGAIGS*YTADVPSIVTDAFM
Trigger: CATGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTGCACCATTAATTATGGGGTCACATCCAGTTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp CTAGATCCAGAAGACCCCTGGCTAGAATACATACTGCTACTTAACTaGGAACTTGATGAACCTTCTGATTTACTGCTTTTCATCTTCCCT +
Preference number: 2 (lower is better)
Translates to: LDPEDPWLEYILLLN*ELDEPSDLLLFIFP
Trigger: AGGGAAGATGAAAAGCAGTAAATCAGAAGGTTCATCAAGTTCCAAGTTAAGTAGCAGTATGTATTCTAGCCAGGGGTCTTCTGGATCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCAGGGACCAGCATTAGTTaGTTTCCAGTACATAATTGC +
Preference number: 2 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSGTSIS*FPVHNC
Trigger: GCAATTATGTACTGGAAAGCAACTAATGCTGGTCCC...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTCTGACTCACCCCTTATaGTGGTTTGCCTATAAACTT +
Preference number: 2 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSLTHPL*WFAYKL
Trigger: AAGTTTATAGGCAAACCACCATAAGGGGTGAGTCAG...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTTCATCGTCACAGGGATaGACATACATCTTTGAACAA +
Preference number: 2 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLSSSQG*TYIFEQ
Trigger: TTGTTCAAAGATGTATGTCCATCCCTGTGACGATGA...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp GTTTCCTACATCTTATTACCTTGGGACACAAAAGTGGCAGAGTTGTaGAGAGCTGATGACAATAAAAAGGAGAACACTAGAGGAAATGAG +
Preference number: 2 (lower is better)
Translates to: VSYILLPWDTKVAEL*RADDNKKENTRGNE
Trigger: CTCATTTCCTCTAGTGTTCTCCTTTTTATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGTGTCCCAAGGTAATAAGATGTAGGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR TCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCATATTCTCATGCAAAATaGTGGGAGATGCAGTCTTGT +
Preference number: 2 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSYSHAK*WEMQSC
Trigger: ACAAGACTGCATCTCCCATCATTTTGCATGAGAATA...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp CCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGTaGAACAACCTTCATGCAAATGCATCAAGGAATGTATTGCTTTTT +
Preference number: 2 (lower is better)
Translates to: PSFAHDSNGQLPQTK*NNLHANASRNVLLF
Trigger: AAAAAGCAATACATTCCTTGATGCATTTGCATGAAGGTTGTTCAACTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp TTAATGGTGCAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATaGTCACTGATGCATTCATGCCCAAAGATCGAGAAACATTATTCT +
Preference number: 2 (lower is better)
Translates to: LMVQLGVCTQQMFLQ*SLMHSCPKIEKHYS
Trigger: AGAATAATGTTTCTCGATCTTTGGGCATGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTGCACCATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR GCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACATTGATGTCAAAGCCATaGCATTTAGGATTCTTAACC +
Preference number: 2 (lower is better)
Translates to: RIFERTLQILRTSVALETLMSKP*HLGFLT
Trigger: GGTTAAGAATCCTAAATGGCATGGCTTTGACATCAA...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR GCA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTAATAGGGTCTGGATATaGCTTTCTAATTCACCCAGC +
Preference number: 2 (lower is better)
Translates to: LRTSVALETVSWISIFLCNRVWI*LSNSPS
Trigger: GCTGGGTGAATTAGAAAGGCATATCCAGACCCTATT...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp TTTGTTTCCTACATCTTATTACCTTGGGACACAAAAGTGGCAGAGTaGTTGAGAGCTGATGACAATAAAAAGGAGAACACTAGAGGAAAT +
Preference number: 2 (lower is better)
Translates to: FVSYILLPWDTKVAE*LRADDNKKENTRGN
Trigger: ATTTCCTCTAGTGTTCTCCTTTTTATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGTGTCCCAAGGTAATAAGATGTAGGAAACAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 90 bp AATAAGATCAGCTGGATCAGTGTATGGATTTTCATTATTGTTAGTTaGAAAGACATCAGAGTCAAACAGGGTACTCTGAGAATGCCCAGA +
Preference number: 2 (lower is better)
Translates to: NKISWISVWIFIIVS*KDIRVKQGTLRMPR
Trigger: TCTGGGCATTCTCAGAGTACCCTGTTTGACTCTGATGTCTTTCAAACTAACAATAATGAAAATCCATACACTGATCCAGCTGATCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 90 bp CAAACAAAGTTGAACAACCTTCATGCAAATGCATCAAGGAATGTATaGCTTTTTCATTTTCTGCCCAGCCCTTCATATACATGCACTAAA +
Preference number: 2 (lower is better)
Translates to: QTKLNNLHANASRNV*LFHFLPSPSYTCTK
Trigger: TTTAGTGCATGTATATGAAGGGCTGGGCAGAAAATGAAAAAGCAATACATTCCTTGATGCATTTGCATGAAGGTTGTTCAACTTTGTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 72 bp GTGGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGGGGTCGGACTCGAGCC +
Preference number: 3 (lower is better)
Translates to: VVLGVAGHRRDR*RRVMRRGRTRA
Trigger: GGCTCGAGTCCGACCCCTCCTCATCACACGCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 72 bp GGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATaGTTCAGTTTATCTATGACAGCTGTCAAGGACGGC +
Preference number: 3 (lower is better)
Translates to: GSSPPGPLVTTP*FSLSMTAVKDG
Trigger: GCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp AGGATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCAGCATCGGGTGGTTCTaGGTGTTGCCGGCCATCGAA +
Preference number: 3 (lower is better)
Translates to: RMEEFQEQASLERQACQSSIGWF*VLPAIE
Trigger: TTCGATGGCCGGCAACACCAAGAACCACCCGATGCT...GCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTTTTCTTGGTCTTGTaGCTCCCCGAGCATATTTCC +
Preference number: 3 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSFFLVL*LPEHIS
Trigger: GGAAATATGCTCGGGGAGCAACAAGACCAAGAAAAA...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp TTGTTGGGGGAGTGCTACACTGGCTTGGAGCTGGAGTaGTGTGTGGCGTATCCAGCGTGTCAGCTGTCATGT +
Preference number: 3 (lower is better)
Translates to: LLGECYTGLELE*CVAYPACQLSC
Trigger: ACATGACAGCTGACACGCTGGATACGCCACACATCACTCCAGCTCCAAGCCAGTGTAGCACTCCCCCAACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 72 bp CAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATaGTGGGTCAGTGTGGGGGTGAGCCCATCGACAATT +
Preference number: 3 (lower is better)
Translates to: QFSPGSLLSKFR*WVSVGVSPSTI
Trigger: AATTGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
3UTR GCA 72 bp GCTGGTGACTTACTATGGCTGGGAGAGCCACGCTCATaGTTTGGAGTGGAACCACTGATGAGTGGAGAGCCA +
Preference number: 3 (lower is better)
Translates to: AGDLLWLGEPRS*FGVEPLMSGEP
Trigger: TGGCTCTCCACTCATCAGTGGTTCCACTCCAAAGCATGAGCGTGGCTCTCCCAGCCATAGTAAGTCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp TTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTaGGTCAGTGTGGGGGTGAGCCCATCGACAATTCAG +
Preference number: 3 (lower is better)
Translates to: FSPGSLLSKFRC*VSVGVSPSTIQ
Trigger: CTGAATTGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
3UTR CCA 72 bp ACTCATTGGGTTGTTGCCTGTGGTCATGCCATACCCTaGGCTGCTAGCCGGGGGCAGGTTCTTTTTCACCAT +
Preference number: 3 (lower is better)
Translates to: THWVVACGHAIP*AASRGQVLFHH
Trigger: ATGGTGAAAAAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GGGAGTGCTACACTGGCTTGGAGCTGGAGTGATGTGTaGCGTATCCAGCGTGTCAGCTGTCATGTTGACATC +
Preference number: 3 (lower is better)
Translates to: GSATLAWSWSDV*RIQRVSCHVDI
Trigger: GATGTCAACATGACAGCTGACACGCTGGATACGCCACACATCACTCCAGCTCCAAGCCAGTGTAGCACTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GTAAGTTGTTGGGGGAGTGCTACACTGGCTTGGAGCTaGAGTGATGTGTGGCGTATCCAGCGTGTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: VSCWGSATLAWS*SDVWRIQRVSC
Trigger: ACAGCTGACACGCTGGATACGCCACACATCACTCCAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp TTGTGGGTAAGTTGTTGGGGGAGTGCTACACTGGCTTaGAGCTGGAGTGATGTGTGGCGTATCCAGCGTGTC +
Preference number: 3 (lower is better)
Translates to: LWVSCWGSATLA*SWSDVWRIQRV
Trigger: GACACGCTGGATACGCCACACATCACTCCAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTTACCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp AACACCTGGGGGAGTCTGAGATCTTCCTGCACTGCCTaGCGATTTAGATCCACCTGTACTGGTAGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: NTWGSLRSSCTA*RFRSTCTGRWG
Trigger: ACCCCACCTACCAGTACAGGTGGATCTAAATCGCCAGGCAGTGCAGGAAGATCTCAGACTCCCCCAGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTACTCATTTTGGTATTaGTTGGCCCTGCATGGGGGA +
Preference number: 3 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKYSFWY*LALHGG
Trigger: TCCCCCATGCAGGGCCAACAAATACCAAAATGAGTA...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CAA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGGTACCACTCATTGGGTaGTTGCCTGTGGTCATGCCA +
Preference number: 3 (lower is better)
Translates to: FLVLLLPEHISMRGEPEEVPLIG*LPVVMP
Trigger: TGGCATGACCACAGGCAACAACCCAATGAGTGGTAC...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGGGGTGGTTCTTGGTGTaGCCGGCCATCGAAGAGACA +
Preference number: 3 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGGWFLV*PAIEET
Trigger: TGTCTCTTCGATGGCCGGCAACACCAAGAACCACCC...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
54% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCGAGAATGCCCAGAGCTaGAAGAATCTCGAAGAGGGG +
Preference number: 3 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSENAQS*KNLEEG
Trigger: CCCCTCTTCGAGATTCTTCAAGCTCTGGGCATTCTC...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCCTGCTCAGTCCATGCTaGGTTATGGGAGAGGAGCCT +
Preference number: 3 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSLLSPC*VMGEEP
Trigger: AGGCTCCTCTCCCATAACCAAGCATGGACTGAGCAG...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp GTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTaGATGGTTTCAGCTTTCCTCCGAATAGCCCTCATC +
Preference number: 3 (lower is better)
Translates to: VSAMRDSAGVSA*MVSAFLRIALI
Trigger: GATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp CGGAAAGGTGTTGGTTGGTGTAGTGGTACCACTCATTaGGTTGTTGCCTGTGGTCATGCCATACCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: RKGVGWCSGTTH*VVACGHAIPWA
Trigger: AGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACACCTTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp CCTTTGAATACTGGGTTGGGGGTGAGGTACTGGTTGTaGGTAAGTTGTTGGGGGAGTGCTACACTGGCTTGG +
Preference number: 3 (lower is better)
Translates to: PLNTGLGVRYWL*VSCWGSATLAW
Trigger: CCAAGCCAGTGTAGCACTCCCCCAACAACTTACCCACAACCAGTACCTCACCCCCAACCCAGTATTCAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp AATAGTGATTTTGGGAATGGGTGGTGTGGCAACACCTaGGGGAGTCTGAGATCTTCCTGCACTGCCTGGCGA +
Preference number: 3 (lower is better)
Translates to: NSDFGNGWCGNT*GSLRSSCTAWR
Trigger: TCGCCAGGCAGTGCAGGAAGATCTCAGACTCCCCCAGGTGTTGCCACACCACCCATTCCCAAAATCACTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GGCTTTTGCTGCCTGAGGAAGACACAGAACCACTGCTaGTATACTGACTGTGAGAGGAAGGCTTGCCCACCA +
Preference number: 3 (lower is better)
Translates to: GFCCLRKTQNHC*YTDCERKACPP
Trigger: TGGTGGGCAAGCCTTCCTCTCACAGTCAGTATACCAGCAGTGGTTCTGTGTCTTCCTCAGGCAGCAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTCAGATGTTCCTTCAATaGTCACTGATGCATTCATGC +
Preference number: 3 (lower is better)
Translates to: VVACGHAIPWAASRGQVLQMFLQ*SLMHSC
Trigger: GCATGAATGCATCAGTGACAATTGAAGGAACATCTG...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTGGGTGCATAAGTTGGTaGAGTTTCAAACAATGGAAT +
Preference number: 3 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSGCISW*SFKQWN
Trigger: ATTCCATTGTTTGAAACTCAACCAACTTATGCACCC...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp AGAGTCAAACAGGGTACTCTGAGAATGCCCAGAGCTTaGAGAATCTCGAAGAGGGGTGCCAATGGCTGGGCA +
Preference number: 3 (lower is better)
Translates to: RVKQGTLRMPRA*RISKRGANGWA
Trigger: TGCCCAGCCATTGGCACCCCTCTTCGAGATTCTTCAAGCTCTGGGCATTCTCAGAGTACCCTGTTTGACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp CATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTaGGGTGTCGGCTTGAATGGTTTCAGCTTTCCTCCG +
Preference number: 3 (lower is better)
Translates to: HVFNCLCNEGQC*GVGLNGFSFPP
Trigger: CGGAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GACCATCCTTTGAATACTGGGTTGGGGGTGAGGTACTaGTTGTGGGTAAGTTGTTGGGGGAGTGCTACACTG +
Preference number: 3 (lower is better)
Translates to: DHPLNTGLGVRY*LWVSCWGSATL
Trigger: CAGTGTAGCACTCCCCCAACAACTTACCCACAACCAGTACCTCACCCCCAACCCAGTATTCAAAGGATGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGCCACTCATTGGGTTGTaGCCTGTGGTCATGCCATAC +
Preference number: 3 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGPLIGL*PVVMPY
Trigger: GTATGGCATGACCACAGGCAACAACCCAATGAGTGG...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTGGTGCAATTGGGAGTTaGTACACAGCAGATGTTCCT +
Preference number: 3 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSAGAIGS*YTADVP
Trigger: AGGAACATCTGCTGTGTACAAACTCCCAATTGCACC...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp CCTGTGATTTGCAACAAACTGGTAAGAATTGGGTTCTaGGACACCTTGCTGAAGTCCTCCCCATGGCCCACC +
Preference number: 3 (lower is better)
Translates to: PVICNKLVRIGF*DTLLKSSPWPT
Trigger: GGTGGGCCATGGGGAGGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTACCAGTTTGTTGCAAATCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 72 bp CACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTaGTGGGGTGTCGGCTTGAATGGTTTCAGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: HHVFNCLCNEGQ*WGVGLNGFSFP
Trigger: AGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATaGAATAATCAGGAATGGCACAGTGCAGGTGTCAAT +
Preference number: 3 (lower is better)
Translates to: GTMPHPADTDPE*NNQEWHSAGVN
Trigger: ATTGACACCTGCACTGTGCCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 72 bp ATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTaGGGGGTATATGCTGGTGACTTACTATGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: MEEPDSLSLSRF*GVYAGDLLWLG
Trigger: TCCCAGCCATAGTAAGTCACCAGCATATACCCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAACAAAAGTGGCAGAGTaGTTGAGAGCTGATGACAAT +
Preference number: 3 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTTKVAE*LRADDN
Trigger: ATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGT...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CAA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGTTAGTCTTCAGTTTGTaGTCCCCTGGAAGGTTATAC +
Preference number: 3 (lower is better)
Translates to: FLVLLLPEHISMRGEPEELVFSL*SPGRLY
Trigger: GTATAACCTTCCAGGGGACAACAAACTGAAGACTAA...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACGAAGGGGTCCATTTATaGTCAACTGGATGTGACCCC +
Preference number: 3 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNEGVHL*STGCDP
Trigger: GGGGTCACATCCAGTTGACAATAAATGGACCCCTTC...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACGGAAGATCAACACTGTaGGCACTGGTGATTGAGGAG +
Preference number: 3 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNGRSTL*ALVIEE
Trigger: CTCCTCAATCACCAGTGCCAACAGTGTTGATCTTCC...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp CACAGGGTGCTGAAAAGATACGCTGAAACGAGACTCTaGGAGAGGACACACTTCAAATTGGAGAAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: HRVLKRYAETRL*ERTHFKLEKPR
Trigger: CCTGGGCTTCTCCAATTTGAAGTGTGTCCTCTCTCAGAGTCTCGTTTCAGCGTATCTTTTCAGCACCCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp AGAGGAGGAAGAATGGCTATGGTGGCTTTTGCTGCCTaGGGAAGACACAGAACCACTGCTGGTATACTGACT +
Preference number: 3 (lower is better)
Translates to: RGGRMAMVAFAA*GRHRTTAGILT
Trigger: AGTCAGTATACCAGCAGTGGTTCTGTGTCTTCCTCAGGCAGCAAAAGCCACCATAGCCATTCTTCCTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp GCCTTCTGCAATGTCTCCAAACAGCTGACCAAATGTTaGTGCCCTCCAGAACTCATCACAACCCTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: AFCNVSKQLTKC*CPPELITTLFS
Trigger: GGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTGTTTGGAGACATTGCAGAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
3UTR GCA 72 bp AGGAAGAGGAGGAAGAATGGCTATGGTGGCTTTTGCTaGCTGAGGAAGACACAGAACCACTGCTGGTATACT +
Preference number: 3 (lower is better)
Translates to: RKRRKNGYGGFC*LRKTQNHCWYT
Trigger: AGTATACCAGCAGTGGTTCTGTGTCTTCCTCAGGCAGCAAAAGCCACCATAGCCATTCTTCCTCCTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp CCCGTTCCCTGTGATTTGCAACAAACTGGTAAGAATTaGGTTCTGAGACACCTTGCTGAAGTCCTCCCCATG +
Preference number: 3 (lower is better)
Translates to: PVPCDLQQTGKN*VLRHLAEVLPM
Trigger: CATGGGGAGGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTACCAGTTTGTTGCAAATCACAGGGAACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GCAGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGT +
Preference number: 3 (lower is better)
Translates to: AGLSLRRFMSIG*FLVLPAIEETG
Trigger: ACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GGATGTCAGTTACATCTGGGCCAATGCTGTCTGAACTaGATAGTCGGACCATCCTTTGAATACTGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: GCQLHLGQCCLN*IVGPSFEYWVG
Trigger: CCCAACCCAGTATTCAAAGGATGGTCCGACTATCCAGTTCAGACAGCATTGGCCCAGATGTAACTGACATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp TGCTGTCTAATCCGGGCCCCGAGAGAGTACTATTACTaGTGCCATTGCCTTCCTTTACCCTCTTTTGAGTCT +
Preference number: 3 (lower is better)
Translates to: CCLIRAPREYYY*CHCLPLPSFES
Trigger: AGACTCAAAAGAGGGTAAAGGAAGGCAATGGCACCAGTAATAGTACTCTCTCGGGGCCCGGATTAGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GATGCCGTACAGGAATTAGATGATGGGGGAGTTTTCTaGGACAACGAGCCTGAGGATCCTAACCCTGAAGAT +
Preference number: 3 (lower is better)
Translates to: DAVQELDDGGVF*DNEPEDPNPED
Trigger: ATCTTCAGGGTTAGGATCCTCAGGCTCGTTGTCCCAGAAAACTCCCCCATCATCTAATTCCTGTACGGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCACCAAAGTCCTTCATTaGCCCATGACTCAAACGGAC +
Preference number: 3 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSTKVLH*PMTQTD
Trigger: GTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGT...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CAA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTTGTGAAGGGCTCTTATaGATGTCCCCCAGAATCCAG +
Preference number: 3 (lower is better)
Translates to: FWYLLALHGGAEPMILFSCEGLL*MSPRIQ
Trigger: CTGGATTCTGGGGGACATCAATAAGAGCCCTTCACA...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTGCTGGGGTGTCGGCTaGAATGGTTTCAGCTTTCCT +
Preference number: 3 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSCWGVG*NGFSFP
Trigger: AGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp ACAGGCAGGAAGATCAACACTGTTGGCACTGGTGATTaGGGAGAAGGAAGGGGTCCATTTATTGTCAACTGG +
Preference number: 3 (lower is better)
Translates to: TGRKINTVGTGD*GEGRGPFIVNW
Trigger: CCAGTTGACAATAAATGGACCCCTTCCTTCTCCTCAATCACCAGTGCCAACAGTGTTGATCTTCCTGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp ATTACCACACACACCAGGGAGTCATTCACAGGGTGCTaGAAAGATACGCTGAAACGAGACTCTGAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: ITTHTRESFTGC*KDTLKRDSERG
Trigger: TCCTCTCTCAGAGTCTCGTTTCAGCGTATCTTTTCAGCACCCTGTGAATGACTCCCTGGTGTGTGTGGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GCCACGCTCATGCTTTGGAGTGGAACCACTGATGAGTaGAGAGCCATAGTTTTTAGAAGAAGCCATTTGAGG +
Preference number: 3 (lower is better)
Translates to: ATLMLWSGTTDE*RAIVFRRSHLR
Trigger: CCTCAAATGGCTTCTTCTAAAAACTATGGCTCTCCACTCATCAGTGGTTCCACTCCAAAGCATGAGCGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGTTATTGCCCTTAAACTaGGTCTCCCCATTATCACCT +
Preference number: 3 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGLLPLN*VSPLSP
Trigger: AGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAA...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGATCAACTGTGTCGGCTaGGTTATTGCCCTTAAACTT +
Preference number: 3 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGINCVG*VIALKL
Trigger: AAGTTTAAGGGCAATAACCAAGCCGACACAGTTGAT...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTGCTTCCATAAAGGGTaGAGAAATCCTGGGCAGGAT +
Preference number: 3 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSCFHKG*RNPGQD
Trigger: ATCCTGCCCAGGATTTCTCAACCCTTTATGGAAGCA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp GTTTGGACTCCTTCTCCTTGTGATGAAGAGAAACAGTaGGTCCAGCTCTTAGGAATGGCATCAGTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: VWTPSPCDEEKQ*VQLLGMASVLL
Trigger: CAGGAGAACTGATGCCATTCCTAAGAGCTGGACTCACTGTTTCTCTTCATCACAAGGAGAAGGAGTCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp AAGGCCGCAGAATTTTTGAGAGGACCCTCCAAATACTaGGAACTTCTGTTGCACTCGAAACAGTCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: KAAEFLRGPSKY*ELLLHSKQSPG
Trigger: TCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCTGCGGCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp GTATGGGGTCAGGGTCCTTTGATAGCTCAAACTGAGTaGTCAGTTCATACAGGGGTGCATAAGTTGGTTGAG +
Preference number: 3 (lower is better)
Translates to: VWGQGPLIAQTE*SVHTGVHKLVE
Trigger: CTCAACCAACTTATGCACCCCTGTATGAACTGATCACTCAGTTTGAGCTATCAAAGGACCCTGACCCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp CAGGGATGGACATACATCTTTGAACAACTTTGGCAATaGAGTCATCTGTGCAGATCAGTGCATCCGACAGCC +
Preference number: 3 (lower is better)
Translates to: QGWTYIFEQLWQ*SHLCRSVHPTA
Trigger: GGCTGTCGGATGCACTGATCTGCACAGATGACTTCATTGCCAAAGTTGTTCAAAGATGTATGTCCATCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp CTGGTAGGTGGGGTAAAAGGTCTGTTAGAAGAACTATaGGATGGAGACTTTCCCTCAGTGTCTGCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LVGGVKGLLEEL*DGDFPSVSAFF
Trigger: GAAGAAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTTACCCCACCTACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp GAGGCAAGCTTGTCAGAGCCTCCAGGTGGCCTTGAATaGGAAGGGGATATGTTTGGTTTACTTAAAGAAGGA +
Preference number: 3 (lower is better)
Translates to: EASLSEPPGGLE*EGDMFGLLKEG
Trigger: TCCTTCTTTAAGTAAACCAAACATATCCCCTTCTCATTCAAGGCCACCTGGAGGCTCTGACAAGCTTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp GACTTCATGCCAGAGCTTGAACTAGTTCCAGACATATaGGAACCACCAGAACCTGAACTGATAGGGGACTTG +
Preference number: 3 (lower is better)
Translates to: DFMPELELVPDI*EPPEPELIGDL
Trigger: CAAGTCCCCTATCAGTTCAGGTTCTGGTGGTTCTCATATGTCTGGAACTAGTTCAAGCTCTGGCATGAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp ATCACTTTTCTCACGCTTGCCCTGAAACTCTCCTCCTaGCATGTTATGTTTGGAGGACATAGGATGGCTGGA +
Preference number: 3 (lower is better)
Translates to: ITFLTLALKLSS*HVMFGGHRMAG
Trigger: TCCAGCCATCCTATGTCCTCCAAACATAACATGTCAGGAGGAGAGTTTCAGGGCAAGCGTGAGAAAAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp CCCGCTGATACAGATCCTGAATGGAATAATCAGGAATaGCACAGTGCAGGTGTCAATATCAAAGTAAGGCCG +
Preference number: 3 (lower is better)
Translates to: PADTDPEWNNQE*HSAGVNIKVRP
Trigger: CGGCCTTACTTTGATATTGACACCTGCACTGTGCCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 72 bp GCTGCTACTGTATCAACATCACAAGATAAAGCACTCTaGTATCACCTGCCCATATCCTCCTTAGTGTCACCC +
Preference number: 3 (lower is better)
Translates to: AATVSTSQDKAL*YHLPISSLVSP
Trigger: GGGTGACACTAAGGAGGATATGGGCAGGTGATACCAGAGTGCTTTATCTTGTGATGTTGATACAGTAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 72 bp TGGAGACTTTCCCTCAGTGTCTGCCTTCTTCCGCTTTaGAGGCTTATCTTTGCTTTTCCCATCATTAGAAGG +
Preference number: 3 (lower is better)
Translates to: WRLSLSVCLLPL*RLIFAFPIIRR
Trigger: CCTTCTAATGATGGGAAAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAGTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp AGGTGGGGTAAAAGGTCTGTTAGAAGAACTATGAGATaGAGACTTTCCCTCAGTGTCTGCCTTCTTCCGCTT +
Preference number: 3 (lower is better)
Translates to: RWGKRSVRRTMR*RLSLSVCLLPL
Trigger: AAGCGGAAGAAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTTACCCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp ACTGCCTGGCGATTTAGATCCACCTGTACTGGTAGGTaGGGTAAAAGGTCTGTTAGAAGAACTATGAGATGG +
Preference number: 3 (lower is better)
Translates to: TAWRFRSTCTGR*GKRSVRRTMRW
Trigger: CCATCTCATAGTTCTTCTAACAGACCTTTTACCCCACCTACCAGTACAGGTGGATCTAAATCGCCAGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATACAGGGGTGCATAAGTaGGTTGAGTTTCAAACAATG +
Preference number: 3 (lower is better)
Translates to: VGLVIALKLGLPIITSKHTGVHK*VEFQTM
Trigger: CATTGTTTGAAACTCAACCAACTTATGCACCCCTGT...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTACAGCTCACATGTGTaGAGTCCTGCACATCCATTA +
Preference number: 3 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSYSSHV*SPAHPL
Trigger: TAATGGATGTGCAGGACTCAACACATGTGAGCTGTA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp AGAAACAGGCAGGAAGATCAACACTGTTGGCACTGGTaGTTGAGGAGAAGGAAGGGGTCCATTTATTGTCAA +
Preference number: 3 (lower is better)
Translates to: RNRQEDQHCWHW*LRRRKGSIYCQ
Trigger: TTGACAATAAATGGACCCCTTCCTTCTCCTCAATCACCAGTGCCAACAGTGTTGATCTTCCTGCCTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 72 bp AACAACTTTGGCAATGAAGTCATCTGTGCAGATCAGTaGATCCGACAGCCCTTTGTAGAGTTTACAGCTCAC +
Preference number: 3 (lower is better)
Translates to: NNFGNEVICADQ*IRQPFVEFTAH
Trigger: GTGAGCTGTAAACTCTACAAAGGGCTGTCGGATGCACTGATCTGCACAGATGACTTCATTGCCAAAGTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 72 bp CAATGTCTGAAAGGATGTCAGTTACATCTGGGCCAATaGTGTCTGAACTGGATAGTCGGACCATCCTTTGAA +
Preference number: 3 (lower is better)
Translates to: QCLKGCQLHLGQ*CLNWIVGPSFE
Trigger: TTCAAAGGATGGTCCGACTATCCAGTTCAGACAGCATTGGCCCAGATGTAACTGACATCCTTTCAGACATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp CTGAGCTGGGACTATTCTGATAAGATTTCTCTGCTATaGAGGAGCCTGACTCACTTTCACTGTCCAGATTCT +
Preference number: 3 (lower is better)
Translates to: LSWDYSDKISLL*RSLTHFHCPDS
Trigger: AGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATCTTATCAGAATAGTCCCAGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp TGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTaGGACTATTCTGATAAGATTTCTCTGCTATGGAGG +
Preference number: 3 (lower is better)
Translates to: CILEVVGYHRLS*DYSDKISLLWR
Trigger: CCTCCATAGCAGAGAAATCTTATCAGAATAGTCCCAGCTCAGACGATGGTATCCGACCACTTCCAGAATACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATATTTTAGTCTTCAGTTaGTTGTCCCCTGGAAGGTTA +
Preference number: 3 (lower is better)
Translates to: VGLVIALKLGLPIITSKHILVFS*LSPGRL
Trigger: TAACCTTCCAGGGGACAACAAACTGAAGACTAAAAT...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTTCTTTTTCTTGGTCTaGTTGCTCCCCGAGCATATT +
Preference number: 3 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSFFFLV*LLPEHI
Trigger: AATATGCTCGGGGAGCAACAAGACCAAGAAAAAGAA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTGATGACTTCTTTTTCTaGGTCTTGTTGCTCCCCGAG +
Preference number: 3 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLDDFFF*VLLLPE
Trigger: CTCGGGGAGCAACAAGACCAAGAAAAAGAAGTCATC...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp TCAGGAAGGCTGTCCTACACTAAACCTTACTGCATCTaGAAACATGTTTACATCCCAACAAGCCACCTTAGC +
Preference number: 3 (lower is better)
Translates to: SGRLSYTKPYCI*KHVYIPTSHLS
Trigger: GCTAAGGTGGCTTGTTGGGATGTAAACATGTTTTCAGATGCAGTAAGGTTTAGTGTAGGACAGCCTTCCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp GCAGGTGTCAATATCAAAGTAAGGCCGCAGAATTTTTaGGAGGACCCTCCAAATACTGAGAACTTCTGTTGC +
Preference number: 3 (lower is better)
Translates to: AGVNIKVRPQNF*EDPPNTENFCC
Trigger: GCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCTGCGGCCTTACTTTGATATTGACACCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp CCTGCAGAAACCAACGGGATAGGATTCAAAACTAGGTaGCAAACTCATGAGAAATCCAACCTGGCTGAATGT +
Preference number: 3 (lower is better)
Translates to: PAETNGIGFKTR*QTHEKSNLAEC
Trigger: ACATTCAGCCAGGTTGGATTTCTCATGAGTTTGTCACCTAGTTTTGAATCCTATCCCGTTGGTTTCTGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp CCTCCAAGCATTGGCACCCCCAAAGTATTTAGTGCCTaGGATGCAAATCCTTTGAAATCATCATTATCCCCA +
Preference number: 3 (lower is better)
Translates to: PPSIGTPKVFSA*DANPLKSSLSP
Trigger: TGGGGATAATGATGATTTCAAAGGATTTGCATCTCAGGCACTAAATACTTTGGGGGTGCCAATGCTTGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp CTTAAAGAAGGATTCATAAGTGATGATGGCTTTCCTTaGGGTTTCATCTTGGTGCTGCTAGAGCCACTGCTC +
Preference number: 3 (lower is better)
Translates to: LKEGFISDDGFP*GFILVLLEPLL
Trigger: GAGCAGTGGCTCTAGCAGCACCAAGATGAAACCTCAAGGAAAGCCATCATCACTTATGAATCCTTCTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 72 bp AATGGCATCAGTTCTCCTGCAAACAAAATGCTGGGATaGAGACTTTTGGCACATTGTGGAAGTAGGAGAACT +
Preference number: 3 (lower is better)
Translates to: NGISSPANKMLG*RLLAHCGSRRT
Trigger: AGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAGGAGAACTGATGCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 72 bp CTCTTAGGAATGGCATCAGTTCTCCTGCAAACAAAATaGTGGGATGCAGACTTTTGGCACATTGTGGAAGTA +
Preference number: 3 (lower is better)
Translates to: LLGMASVLLQTK*WDADFWHIVEV
Trigger: TACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAGGAGAACTGATGCCATTCCTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 72 bp ATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTCATaGTCACCTAGCATTCCAGGCCCCCATTACTTCAAA +
Preference number: 3 (lower is better)
Translates to: IGLLHSSKGLSS*SPSIPGPHYFK
Trigger: TTTGAAGTAATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAGCAACCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 72 bp AGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGGCTTATCTTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: RRTMRWRLSLSV*LLPLWRLIFAF
Trigger: AAAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GCAGTTCTGCAGTTTCTGAACAAATGCTCTAGATACTaGGATTGGCTGGGGAAATTTCAAGAAGAAACAGGC +
Preference number: 3 (lower is better)
Translates to: AVLQFLNKCSRY*DWLGKFQEETG
Trigger: GCCTGTTTCTTCTTGAAATTTCCCCAGCCAATCCCAGTATCTAGAGCATTTGTTCAGAAACTGCAGAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGCTAACTCGGGATTCTTaGATCTGGGATGAAGACAGA +
Preference number: 3 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRLTRDS*IWDEDR
Trigger: TCTGTCTTCATCCCAGATCAAAGAATCCCGAGTTAG...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CAA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCAATGGGAGATGCAGTCTaGTCATCCAGTAGGTCAGAA +
Preference number: 3 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSMGDAV*SSSRSE
Trigger: TTCTGACCTACTGGATGACAAGACTGCATCTCCCAT...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp ACTTCAGGTTCATTAAATGACCCCCACTCCTTGGTGTaGGATAGCCAACACTTCCATGAAGAATCTTATCCA +
Preference number: 3 (lower is better)
Translates to: TSGSLNDPHSLV*DSQHFHEESYP
Trigger: TGGATAAGATTCTTCATGGAAGTGTTGGCTATCTCACACCAAGGAGTGGGGGTCATTTAATGAACCTGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp GAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTaGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCC +
Preference number: 3 (lower is better)
Translates to: ERKSFKSHQPQA*FWQLYPALFVP
Trigger: GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
3UTR TCA 72 bp ACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTaGAGGGCTCTTATTGATGTCCCCCAGAATCCAGAC +
Preference number: 3 (lower is better)
Translates to: TRNSLLDFYIFM*RALIDVPQNPD
Trigger: GTCTGGATTCTGGGGGACATCAATAAGAGCCCTTCACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp GACAAACTCATGAGAAATCCAACCTGGCTGAATGTCTaGGAGGCTGCTACTGTATCAACATCACAAGATAAA +
Preference number: 3 (lower is better)
Translates to: DKLMRNPTWLNV*EAATVSTSQDK
Trigger: TTTATCTTGTGATGTTGATACAGTAGCAGCCTCTCAGACATTCAGCCAGGTTGGATTTCTCATGAGTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp CCCCCAAAGTATTTAGTGCCTGAGATGCAAATCCTTTaGAATCATCATTATCCCCACTTTGGCTGCTTTCAT +
Preference number: 3 (lower is better)
Translates to: PPKYLVPEMQIL*NHHYPHFGCFH
Trigger: ATGAAAGCAGCCAAAGTGGGGATAATGATGATTTCAAAGGATTTGCATCTCAGGCACTAAATACTTTGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp TTTGATTTGTCTTTATCACTTTTCTCACGCTTGCCCTaGAACTCTCCTCCTGACATGTTATGTTTGGAGGAC +
Preference number: 3 (lower is better)
Translates to: FDLSLSLFSRLP*NSPPDMLCLED
Trigger: GTCCTCCAAACATAACATGTCAGGAGGAGAGTTTCAGGGCAAGCGTGAGAAAAGTGATAAAGACAAATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR GCA 72 bp TGCCTTTCTAATTCACCCAGCTTGATGTCAAAGCCATaGCATTTAGGATTCTTAACCAAATCAGACCTGTCT +
Preference number: 3 (lower is better)
Translates to: CLSNSPSLMSKP*HLGFLTKSDLS
Trigger: AGACAGGTCTGATTTGGTTAAGAATCCTAAATGGCATGGCTTTGACATCAAGCTGGGTGAATTAGAAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 72 bp ACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGTTaGTACATAGTAGCAAGGGTTTATCTTCATGCTCAC +
Preference number: 3 (lower is better)
Translates to: TQTYFSKKVQLG*YIVARVYLHAH
Trigger: GTGAGCATGAAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 72 bp TACTTAACTTGGAACTTGATGAACCTTCTGATTTACTaGTTTTCATCTTCCCTGAGGTGGAAGCAGATGAGG +
Preference number: 3 (lower is better)
Translates to: YLTWNLMNLLIY*FSSSLRWKQMR
Trigger: CCTCATCTGCTTCCACCTCAGGGAAGATGAAAAGCAGTAAATCAGAAGGTTCATCAAGTTCCAAGTTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp ACCAGAATCAAACCCTGTGGTTTCTTTAATAGGGTCTaGATATGCCTTTCTAATTCACCCAGCTTGATGTCA +
Preference number: 3 (lower is better)
Translates to: TRIKPCGFFNRV*ICLSNSPSLMS
Trigger: TGACATCAAGCTGGGTGAATTAGAAAGGCATATCCAGACCCTATTAAAGAAACCACAGGGTTTGATTCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 72 bp GATGAATTTTTGGACTGGCTAGATCCAGAAGACCCCTaGCTAGAATACATACTGCTACTTAACTTGGAACTT +
Preference number: 3 (lower is better)
Translates to: DEFLDWLDPEDP*LEYILLLNLEL
Trigger: AAGTTCCAAGTTAAGTAGCAGTATGTATTCTAGCCAGGGGTCTTCTGGATCTAGCCAGTCCAAAAATTCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTGATGGACATACATCTTaGAACAACTTTGGCAATGAA +
Preference number: 3 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLDGHTS*NNFGNE
Trigger: TTCATTGCCAAAGTTGTTCAAAGATGTATGTCCATC...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp CCCATGACTCAAACGGACAACTACCTCAAACAAAGTTaGACAACCTTCATGCAAATGCATCAAGGAATGTAT +
Preference number: 3 (lower is better)
Translates to: PMTQTDNYLKQS*TTFMQMHQGMY
Trigger: ATACATTCCTTGATGCATTTGCATGAAGGTTGTTCAACTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp TCTTATTACCTTGGGACACAAAAGTGGCAGAGTTGTTaGGAGCTGATGACAATAAAAAGGAGAACACTAGAG +
Preference number: 3 (lower is better)
Translates to: SYYLGTQKWQSC*ELMTIKRRTLE
Trigger: CTCTAGTGTTCTCCTTTTTATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGTGTCCCAAGGTAATAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR GCA 72 bp AAACCTTTGATTTGTCTTTATCACTTTTCTCACGCTTaGCCTGAAACTCTCCTCCTGACATGTTATGTTTGG +
Preference number: 3 (lower is better)
Translates to: KPLICLYHFSHA*PETLLLTCYVW
Trigger: CCAAACATAACATGTCAGGAGGAGAGTTTCAGGGCAAGCGTGAGAAAAGTGATAAAGACAAATCAAAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CCA 72 bp AAACTGAGTGATCAGTTCATACAGGGGTGCATAAGTTaGTTGAGTTTCAAACAATGGAATTCCTGTGCAGTT +
Preference number: 3 (lower is better)
Translates to: KLSDQFIQGCIS*LSFKQWNSCAV
Trigger: AACTGCACAGGAATTCCATTGTTTGAAACTCAACCAACTTATGCACCCCTGTATGAACTGATCACTCAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR TCA 72 bp TTTTTACTGTTTTATCTCAGGGAGCATACAGTGGAGTaGTTAAAGTTTGGACTCCTTCTCCTTGTGATGAAG +
Preference number: 3 (lower is better)
Translates to: FLLFYLREHTVE*LKFGLLLLVMK
Trigger: CTTCATCACAAGGAGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR TCA 72 bp GAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTaGTGCATTCATGCCCAAAGATCGAGAAACATTATT +
Preference number: 3 (lower is better)
Translates to: EFVHSRCSFNCH*CIHAQRSRNII
Trigger: AATAATGTTTCTCGATCTTTGGGCATGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR-3UTR CAA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTGCATCAAGGAATGTATaGCTTTTTCATTTTCTGCCC +
Preference number: 3 (lower is better)
Translates to: LRTSVALETVSWISIFLCASRNV*LFHFLP
Trigger: GGGCAGAAAATGAAAAAGCAATACATTCCTTGATGC...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CCA 72 bp ACTTTACAATGTTTTGTTTCCTACATCTTATTACCTTaGGACACAAAAGTGGCAGAGTTGTTGAGAGCTGAT +
Preference number: 3 (lower is better)
Translates to: TLQCFVSYILLP*DTKVAELLRAD
Trigger: ATCAGCTCTCAACAACTCTGCCACTTTTGTGTCCCAAGGTAATAAGATGTAGGAAACAAAACATTGTAAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR-3UTR CAA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAACCCCTTATGGTGGTTaGCCTATAAACTTATCAATA +
Preference number: 3 (lower is better)
Translates to: RKKIFQESPTSSLVLAIITPYGG*PINLSI
Trigger: TATTGATAAGTTTATAGGCAAACCACCATAAGGGGT...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTCAACTGTCTCTGCAATaGGGGACAGTGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSQLSLQ*GTVLGC
Trigger: ACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTG...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCTGCGCTTCCCTGGTTTaGTGTCTAATCCGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPICASLV*CLIRAP
Trigger: CGGGGCCCGGATTAGACAGCAAACCAGGGAAGCGCA...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCAGTGCCACTGGCACTaGGATGAGAGCCCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSQCHWH*DESPVH
Trigger: ATGGACTGGGCTCTCATCTCAGTGCCAGTGGCACTG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTGTGAGAGGAAGGCTTaGCCACCATCACTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSCERKA*PPSLFP
Trigger: AGGGAACAGTGATGGTGGGCAAGCCTTCCTCTCACA...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCGGTCATGCCATACCCTaGGCTGCTAGCCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: MEEFQEQASLERQACQSLGHAIP*AASRGQ
Trigger: CTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACC...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTTTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: VVACGHAIPWAASRGQVLFMSIG*FLVLPA
Trigger: GGCCGGCAACACCAAGAACCACCCGATGCTCATGAA...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCCATCTGGCCGTCCAGTaGGTCTTCACCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: MEEFQEQASLERQACQSLHLAVQ*VFTPRA
Trigger: GGCCCTGGGGGTGAAGACCCACTGGACGGCCAGATG...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCCACTGGCACTGAGATaGGAGCCCAGTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSPLALR*EPSPFC
Trigger: ACAGAATGGACTGGGCTCTCATCTCAGTGCCAGTGG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTATTTCCATGCGGGGTaGGCCGGAAGAGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGYFHAG*AGRGVL
Trigger: CAGAACTCCTCTTCCGGCTCACCCCGCATGGAAATA...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAGGCTTGGAGCTGGAGTaGTGTGTGGCGTATCCAGCG +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTGLELE*CVAYPA
Trigger: CGCTGGATACGCCACACATCACTCCAGCTCCAAGCC...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTTTCTCACGCTTGCCCTaGAACTCTCCTCCTGACATG +
Preference number: 4 (lower is better)
Translates to: VVACGHAIPWAASRGQVLFSRLP*NSPPDM
Trigger: CATGTCAGGAGGAGAGTTTCAGGGCAAGCGTGAGAA...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTGGGTCAGTGTGGGGGTaGGCCCATCGACAATTCAGG +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFGSVWG*AHRQFR
Trigger: CCTGAATTGTCGATGGGCTCACCCCCACACTGACCC...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGAGCAAGTTCAGATGCTaGGTCAGTGTGGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKSKFRC*VSVGVS
Trigger: GCTCACCCCCACACTGACCCAGCATCTGAACTTGCT...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGCGGGAAGGATCAATCTaGAGTCCCCGGCGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FLVLLLPEHISMRGEPEEREGSI*SPRRQE
Trigger: TTCTTGCCGCCGGGGACTTCAGATTGATCCTTCCCG...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTCAGCTGACCAAATGTTaGTGCCCTCCAGAACTCATC +
Preference number: 4 (lower is better)
Translates to: VVACGHAIPWAASRGQVLQLTKC*CPPELI
Trigger: GATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTG...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCCCCACTCCTTGGTGTaGGATAGCCAACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSPHSLV*DSQHFH
Trigger: ATGGAAGTGTTGGCTATCTCACACCAAGGAGTGGGG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTGCTGAAAAGATACGCTaGAACGAGACTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSAEKIR*NETLRE
Trigger: CTCTCTCAGAGTCTCGTTTCAGCGTATCTTTTCAGC...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCGGCTTGGAGCTGGAGTaGTGTGTGGCGTATCCAGCG +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSGLELE*CVAYPA
Trigger: CGCTGGATACGCCACACATCACTCCAGCTCCAAGCC...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTGGCTGGTCTCGAACTCCTaGCCTCAGGTGATCGACCCG +
Preference number: 4 (lower is better)
Translates to: VDALQNSSQPSSPCWSAWLVSNS*PQVIDP
Trigger: CGGGTCGATCACCTGAGGTCAGGAGTTCGAGACCAG...CCAGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR GCA 90 bp GTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTGGGCAAGAAGAGAAGGGTaGTCGAGGCCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: VDALQNSSQPSSPCWSAWARREG*SRPPPS
Trigger: AGATGGCGGCGGCCTCGAGCACCCTTCTCTTCTTGC...CCAGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR GCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTGCAATGAGGGACAGTaGTGGGGTGTCGGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGCNEGQ*WGVGLN
Trigger: ATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCA...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGTGCAATGAGGGACAGTaGTGGGGTGTCGGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSCNEGQ*WGVGLN
Trigger: ATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCA...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTGCGCTTCCCTGGTTTaGTGTCTAATCCGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSACASLV*CLIRAP
Trigger: CGGGGCCCGGATTAGACAGCAAACCAGGGAAGCGCA...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCAGTGCTACACTGGCTTaGAGCTGGAGTGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGSATLA*SWSDVW
Trigger: CCACACATCACTCCAGCTCCAAGCCAGTGTAGCACT...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCAAATGCAGTGCTCCCTaGTTCTCAGGCAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPIKCSAP*FSGRVK
Trigger: CTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTT...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTTCTCCTCCACCCTGTaGAGAAATGCAGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGFSSTL*RNAVLP
Trigger: AGGGAGCACTGCATTTCTCCACAGGGTGGAGGAGAA...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTCCTCGGTTTCCCCCTaGGCTTTCATCCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGSSVSP*AFILKA
Trigger: CGCCTTCAGGATGAAAGCTCAGGGGGAAACCGAGGA...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGACTCGGCCAGGGTGCTaGAAGGTGATTTTGCTAACA +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKTRPGC*KVILLT
Trigger: TGTTAGCAAAATCACCTTTCAGCACCCTGGCCGAGT...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCCAAATCAGACCTGTCTaGCTCACCCCTTATGGTGGT +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGQIRPV*LTPYGG
Trigger: ACCACCATAAGGGGTGAGTCAGACAGGTCTGATTTG...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCTCTAAAGGCGGGCTCTaGCTAATTTGCTTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPISKGGL*LICLGL
Trigger: CAAGCCCAAGCAAATTAGTCAGAGCCCGCCTTTAGA...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGGGTGGTTCTTGGTGTTaGCGGCCATCGAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: FLVLLLPEHISMRGEPEEGGSWC*RPSKRQ
Trigger: CTGTCTCTTCGATGGCCGGCAACACCAAGAACCACC...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTGAGTACTATTACTGGTaGCATTGCCTTCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSEYYYW*HCLPLP
Trigger: GGGTAAAGGAAGGCAATGGCACCAGTAATAGTACTC...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AGGATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCGCATCGGGTGGTTCTTaGTGTTGCCGGCCATCGAAG +
Preference number: 4 (lower is better)
Translates to: RMEEFQEQASLERQACQSASGGS*CCRPSK
Trigger: CTTCGATGGCCGGCAACACCAAGAACCACCCGATGC...GCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCGAGGAAGAATGGCTATaGTGGCTTTTGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGEEEWL*WLLLPE
Trigger: CTCAGGCAGCAAAAGCCACCATAGCCATTCTTCCTC...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp GTGTTGGTTGGTGTAGTGGTACCACTCATTGGGTTGTaGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCC +
Preference number: 4 (lower is better)
Translates to: VLVGVVVPLIGL*PVVMPYPGLLA
Trigger: GGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTCCTGAGCTTTCATCCTaGAGGCGAGGAGAAGCTAGA +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFPELSS*RRGEAR
Trigger: TCTAGCTTCTCCTCGCCTTCAGGATGAAAGCTCAGG...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGGTTCATTAAATaGCCCCCACTCCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKFRFIK*PPLLGV
Trigger: CACACCAAGGAGTGGGGGTCATTTAATGAACCTGAA...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGGCTGAAAAGATACGCTaGAACGAGACTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKAEKIR*NETLRE
Trigger: CTCTCTCAGAGTCTCGTTTCAGCGTATCTTTTCAGC...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCACAGCTCACATGTGTTaGGTCCTGCACATCCATTAC +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPITAHMC*VLHIHY
Trigger: GTAATGGATGTGCAGGACTCAACACATGTGAGCTGT...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGTCTGAGACACCTTGCTaGAGTCCTCCCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGSETPC*SPPHGP
Trigger: TGGGCCATGGGGAGGACTTCAGCAAGGTGTCTCAGA...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGGCTTCAGTTTATCTATaGCAGCTGTCAAGGACGGCT +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSASVYL*QLSRTA
Trigger: AGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGC...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCCCCAGGGCCACTGGTaGCAACCCCATGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSPQGHW*QPHASV
Trigger: AACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGG...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCTTCATTTGCCCATaGCTCAAACGGACAACTACC +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGSFICP*LKRTTT
Trigger: GGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGA...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTCTGGTGACAACCCCATaGTTCAGTTTATCTATGACA +
Preference number: 4 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSLVTTP*FSLSMT
Trigger: TGTCATAGATAAACTGAAGCATGGGGTTGTCACCAG...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTACGGAGGAAACAAGTTaGCTCGGGATCCCGGGACGC +
Preference number: 4 (lower is better)
Translates to: MLMPSRTHHNPLLLVGQPTEETS*LGIPGR
Trigger: GCGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGT...AGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR CCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAAATGAGGGACAGTGCTaGGGTGTCGGCTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTNEGQC*GVGLNG
Trigger: ACCATTCAAGCCGACACCCCAGCACTGTCCCTCATT...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTGATCCAGAAGACCCCTaGCTAGAATACATACTGCTA +
Preference number: 4 (lower is better)
Translates to: VVACGHAIPWAASRGQVLDPEDP*LEYILL
Trigger: TAGCAGTATGTATTCTAGCCAGGGGTCTTCTGGATC...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCGTCCATGCTTGGTTATaGGAGAGGAGCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: PELIGDLALEDGGVPGTGVHAWL*ERSLAS
Trigger: GGAAGCCAGGCTCCTCTCCCATAACCAAGCATGGAC...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTGCCACGCTCATGCTTTaGAGTGGAACCACTGATGAG +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFATLML*SGTTDE
Trigger: CTCATCAGTGGTTCCACTCCAAAGCATGAGCGTGGC...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTAGCAAGTTCAGATGCTaGGTCAGTGTGGGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSSKFRC*VSVGVS
Trigger: GCTCACCCCCACACTGACCCAGCATCTGAACTTGCT...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAAATGCAGTGCTCCCTaGTTCTCAGGCAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFKCSAP*FSGRVK
Trigger: CTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTT...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
3UTR CAA 72 bp CCATCATTAGAAGGGGTCCGACTGCGCTTCCCTGGTTaGCTGTCTAATCCGGGCCCCGAGAGAGTACTATTA +
Preference number: 4 (lower is better)
Translates to: PSLEGVRLRFPG*LSNPGPERVLL
Trigger: TAATAGTACTCTCTCGGGGCCCGGATTAGACAGCAAACCAGGGAAGCGCAGTCGGACCCCTTCTAATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCCGGGAAGGATCAATCTaGAGTCCCCGGCGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTREGSI*SPRRQE
Trigger: TTCTTGCCGCCGGGGACTTCAGATTGATCCTTCCCG...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp ATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTCGGGAAGGATCAATCTaGAGTCCCCGGCGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: MLMPSRTHHNPLLLVGQPREGSI*SPRRQE
Trigger: TTCTTGCCGCCGGGGACTTCAGATTGATCCTTCCCG...AGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR TCA 90 bp ATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTTCCTCGGTTTCCCCCTaGGCTTTCATCCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: MLMPSRTHHNPLLLVGQPSSVSP*AFILKA
Trigger: CGCCTTCAGGATGAAAGCTCAGGGGGAAACCGAGGA...AGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR TCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCTCTTCTCCATGACTTaGCGCACAAGCTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSLFSMT*RTSLMV
Trigger: AACCATTAAGCTTGTGCGTCAAGTCATGGAGAAGAG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACACAGCTGACCAAATGTTaGTGCCCTCCAGAACTCATC +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTQLTKC*CPPELI
Trigger: GATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTG...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATTATTTCCATGCGGGGTaGGCCGGAAGAGGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDYFHAG*AGRGVL
Trigger: CAGAACTCCTCTTCCGGCTCACCCCGCATGGAAATA...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCACACCTGGGGGAGTCTaGGATCTTCCTGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTTPGGV*DLPALP
Trigger: AGGCAGTGCAGGAAGATCTCAGACTCCCCCAGGTGT...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCCTCCCATGCTGGTTCTaGGAGGATGACATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PELIGDLALEDGGVPGTGLPCWF*EDDMEE
Trigger: CTCTTCCATGTCATCCTCTCAGAACCAGCATGGGAG...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGCCCCAGGGCCACTGGTaGCAACCCCATGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: SLQLTCVESCTSITTHTRPQGHW*QPHASV
Trigger: AACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGG...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCCATCAGAGCAGGTTATaGCCAAGAACCCCTAATGTT +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGHQSRL*PRTPNV
Trigger: AACATTAGGGGTTCTTGGTCATAACCTGCTCTGATG...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTGCAATGAGGGACAGTaGTGGGGTGTCGGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGCNEGQ*WGVGLN
Trigger: ATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCA...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTCCACTGCTCAGTCCATaGTTGGTTATGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSPLLSP*LVMGEE
Trigger: CTCCTCTCCCATAACCAAGCATGGACTGAGCAGTGG...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCTCCTGCAAACAAAATaGTGGGATGCAGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSLLQTK*WDADFW
Trigger: CCAAAAGTCTGCATCCCAGCATTTTGTTTGCAGGAG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATACGGAGGAAACAAGTTaGCTCGGGATCCCGGGACGC +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHTEETS*LGIPGR
Trigger: GCGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGT...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGGGACACACTTCAAATTaGAGAAGCCCAGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKGHTSN*RSPGES
Trigger: AGATTCTCCTGGGCTTCTCCAATTTGAAGTGTGTCC...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGGGGTGTCGGCTTGAATaGTTTCAGCTTTCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: FLVLLLPEHISMRGEPEEGCRLE*FQLSSE
Trigger: TTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCC...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCAGTGCTACACTGGCTTaGAGCTGGAGTGATGTGTGG +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGSATLA*SWSDVW
Trigger: CCACACATCACTCCAGCTCCAAGCCAGTGTAGCACT...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCAATGCTGTCTGAACTaGATAGTCGGACCATCCTTT +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSQCCLN*IVGPSF
Trigger: AAAGGATGGTCCGACTATCCAGTTCAGACAGCATTG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCAGGGGTGCCAATGGCTaGGCAATCATCACTAGTGCT +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSRGANG*AIITSA
Trigger: AGCACTAGTGATGATTGCCCAGCCATTGGCACCCCT...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGGATTTTGGGAATGGGTaGTGTGGCAACACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGDFGNG*CGNTWG
Trigger: CCCCCAGGTGTTGCCACACCACCCATTCCCAAAATC...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGATGGGGGAGTTTTCTaGGACAACGAGCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSDGGVF*DNEPED
Trigger: ATCCTCAGGCTCGTTGTCCCAGAAAACTCCCCCATC...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCGATGGGGGAGTTTTCTaGGACAACGAGCCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: MEEFQEQASLERQACQSLDGGVF*DNEPED
Trigger: ATCCTCAGGCTCGTTGTCCCAGAAAACTCCCCCATC...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTGTGACTTACTATGGCTaGGAGAGCCACGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSAVTYYG*ESHAHA
Trigger: AGCATGAGCGTGGCTCTCCCAGCCATAGTAAGTCAC...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCACTGGTCTGAAGAGATaGGTGATTTGGACCAACTCT +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPITGLKR*VIWTNS
Trigger: AGAGTTGGTCCAAATCACCCATCTCTTCAGACCAGT...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTGGGATGCAGACTTTTaGCACATTGTGGAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGWDADF*HIVEVG
Trigger: TCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCA...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp TGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTaGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: CLCNEGQCWGVG*NGFSFPPNSPH
Trigger: ATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 72 bp AAGGTGTTGGTTGGTGTAGTGGTACCACTCATTGGGTaGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: KVLVGVVVPLIG*LPVVMPYPGLL
Trigger: TAGCAGCCCAGGGTATGGCATGACCACAGGCAACAACCCAATGAGTGGTACCACTACACCAACCAACACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 72 bp TTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTaGGTGTTGCCGGCCATCGAAGAGACAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSLRRFMSIGWF*VLPAIEETGGG
Trigger: GCCGCCACCTGTCTCTTCGATGGCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTATGTCTCCAAACAGCTaGCCAAATGTTGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFMSPNS*PNVDAL
Trigger: GAGGGCATCAACATTTGGTCAGCTGTTTGGAGACAT...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCTTCAATTGTCACTaGTGCATTCATGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGSFNCH*CIHAQR
Trigger: TCTTTGGGCATGAATGCATCAGTGACAATTGAAGGA...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACCACTGTTGGCACTGGTaGTTGAGGAGAAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNHCWHW*LRRRKG
Trigger: CCCCTTCCTTCTCCTCAATCACCAGTGCCAACAGTG...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCACTCGGCCAGGGTGCTaGAAGGTGATTTTGCTAACA +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSTRPGC*KVILLT
Trigger: TGTTAGCAAAATCACCTTTCAGCACCCTGGCCGAGT...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAGCTGAAACGAGACTCTaGGAGAGGACACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTAETRL*ERTHFK
Trigger: TTTGAAGTGTGTCCTCTCTCAGAGTCTCGTTTCAGC...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACATCAAACAGGGTACTCTaGGAATGCCCAGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTSNRVL*ECPELE
Trigger: TTCAAGCTCTGGGCATTCTCAGAGTACCCTGTTTGA...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCTGTTAGAAGAACTATaGGATGGAGACTTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSLLEEL*DGDFPS
Trigger: TGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGACACCTGGGGGAGTCTaGGATCTTCCTGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SLQLTCVESCTSITTHTRTPGGV*DLPALP
Trigger: AGGCAGTGCAGGAAGATCTCAGACTCCCCCAGGTGT...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATTGCTATGGAGGAGCCTaGCTCACTTTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDCYGGA*LTFTVQ
Trigger: CTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCA...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGGGCCTTCCATCATTTTaGACCCTAAACCTCATAGAT +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKGLPSF*TLNLID
Trigger: ATCTATGAGGTTTAGGGTTCAAAATGATGGAAGGCC...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTCCCAATCTAGCTTCTaGGATGTTAAGTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKSQSSF*DVKYFL
Trigger: CAGGAAGTACTTAACATCTCAGAAGCTAGATTGGGA...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGCAAGAAGAGAAGGGTaGTCGAGGCCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSARREG*SRPPPS
Trigger: AGATGGCGGCGGCCTCGAGCACCCTTCTCTTCTTGC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGGGGACCAGCATTAGTTaGTTTCCAGTACATAATTGC +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKGTSIS*FPVHNC
Trigger: GCAATTATGTACTGGAAAGCAACTAATGCTGGTCCC...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCAGTTCATACAGGGGTaGATAAGTTGGTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSQFIQG*ISWLSF
Trigger: GAAACTCAACCAACTTATGCACCCCTGTATGAACTG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCGTCTTCAACTGTCTCTaGAATGAGGGACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSVFNCL*NEGQCW
Trigger: CCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGAC...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp AGGATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCACTCATTGGGTTGTTaGCTGTGGTCATGCCATACC +
Preference number: 4 (lower is better)
Translates to: RMEEFQEQASLERQACQSHSLGC*LWSCHT
Trigger: GGTATGGCATGACCACAGGCAACAACCCAATGAGTG...GCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATTGGCCCACCGACTCATaGCGATCTTTGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDWPTDS*RSLMLM
Trigger: CATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCA...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCCGAGCATATTTCCATaGGGGGTGAGCCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHPSIFP*GVSRKR
Trigger: CCTCTTCCGGCTCACCCCGCATGGAAATATGCTCGG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCTGGTGACAACCCCATaGTTCAGTTTATCTATGACA +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSLVTTP*FSLSMT
Trigger: TGTCATAGATAAACTGAAGCATGGGGTTGTCACCAG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTCCACCATATAAGCCTTaGTCTTCGGCCTTCCATCAT +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFPPYKP*SSAFHH
Trigger: ATGATGGAAGGCCGAAGAGCAAGGCTTATATGGTGG...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCAAGGTCCAATTGGGTTaGTACATAGTAGCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPIKVQLG*YIVARV
Trigger: AACCCTTGCTACTATGTAGCAACCCAATTGGACCTT...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGGGTGTCGGCTTGAATaGTTTCAGCTTTCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSGCRLE*FQLSSE
Trigger: TTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCC...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATAATGAGGGACAGTGCTaGGGTGTCGGCTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDNEGQC*GVGLNG
Trigger: ACCATTCAAGCCGACACCCCAGCACTGTCCCTCATT...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGGGTCATGCCATACCCTaGGCTGCTAGCCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRGHAIP*AASRGQ
Trigger: CTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACC...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCCATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGHRRDR*RRVMRR
Trigger: CCTCCTCATCACACGCCGCCACCTGTCTCTTCGATG...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTGGGGGTGAGGTACTaGTTGTGGGTAAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGLGVRY*LWVSCW
Trigger: CCAACAACTTACCCACAACCAGTACCTCACCCCCAA...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCTCTTCCTGCACTGCCTaGCGATTTAGATCCACCTGT +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSSSCTA*RFRSTC
Trigger: ACAGGTGGATCTAAATCGCCAGGCAGTGCAGGAAGA...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AGGATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCGAGGAAGAATGGCTATaGTGGCTTTTGCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RMEEFQEQASLERQACQSEEEWL*WLLLPE
Trigger: CTCAGGCAGCAAAAGCCACCATAGCCATTCTTCCTC...GCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAAGGAACAGGCTTCATTaGAGAGGCAAGCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTRNRLH*RGKLVR
Trigger: TCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCT...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTCTTGGCTTTAGAGGATaGAGGAGTTCCAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSALGFRG*RSSRNR
Trigger: CCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAG...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTCACTGTCCAGATTCTaGGGGGTATATGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGSLSRF*GVYAGD
Trigger: GTCACCAGCATATACCCCCCAGAATCTGGACAGTGA...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCCTCTTCTCCATGACTTaGCGCACAAGCTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSLFSMT*RTSLMV
Trigger: AACCATTAAGCTTGTGCGTCAAGTCATGGAGAAGAG...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCATGTCTCCAAACAGCTaGCCAAATGTTGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSMSPNS*PNVDAL
Trigger: GAGGGCATCAACATTTGGTCAGCTGTTTGGAGACAT...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTTCAGGTTCATTAAATaGCCCCCACTCCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSAFRFIK*PPLLGV
Trigger: CACACCAAGGAGTGGGGGTCATTTAATGAACCTGAA...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGTATTCTCATGCAAAATaGTGGGAGATGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSYSHAK*WEMQSC
Trigger: ACAAGACTGCATCTCCCATCATTTTGCATGAGAATA...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATCACTGTTGGCACTGGTaGTTGAGGAGAAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHHCWHW*LRRRKG
Trigger: CCCCTTCCTTCTCCTCAATCACCAGTGCCAACAGTG...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCCACTGTTGGCACTGGTaGTTGAGGAGAAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPHCWHW*LRRRKG
Trigger: CCCCTTCCTTCTCCTCAATCACCAGTGCCAACAGTG...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAGCTGGGGTGTCGGCTTaGATGGTTTCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPAGVSA*MVSAFL
Trigger: GAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGC...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGAGAATGCCCAGAGCTTaGAGAATCTCGAAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWRMPRA*RISKRG
Trigger: ACCCCTCTTCGAGATTCTTCAAGCTCTGGGCATTCT...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCCACTCGCCTCCAGGTGGCCTTaGATGAGAAGGGGATATGTT +
Preference number: 4 (lower is better)
Translates to: GAEPMILFSTFPLRFSPLASRWP*MRRGYV
Trigger: AACATATCCCCTTCTCATTCAAGGCCACCTGGAGGC...GAGTGGGGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTGGAGGTGGAAACCTTTaGTTTGTCTTTATCACTTTT +
Preference number: 4 (lower is better)
Translates to: VVACGHAIPWAASRGQVLGGGNL*FVFITF
Trigger: AAAAGTGATAAAGACAAATCAAAGGTTTCCACCTCC...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTCCTGCATGGGGGAGCTaGGCCCATGATACTATTCAG +
Preference number: 4 (lower is better)
Translates to: FWYLLALHGGAEPMILFSPAWGS*AHDTIQ
Trigger: CTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGG...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTCACTGATGCATTCATaGCCAAAGATCGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKSLMHS*PKIEKH
Trigger: ATGTTTCTCGATCTTTGGGCATGAATGCATCAGTGA...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTACATGTGTTGAGTCCTaGACATCCATTACCACACAC +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFTCVES*TSITTH
Trigger: GTGTGTGGTAATGGATGTGCAGGACTCAACACATGT...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGTTGTTGGGGGAGTaGTACACTGGCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNKLLGE*YTGLEL
Trigger: CAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTT...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACCTTTCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNLSLSV*LLPLWR
Trigger: CCTCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAG...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCTGTGAGAGGAAGGCTTaGCCACCATCACTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTCERKA*PPSLFP
Trigger: AGGGAACAGTGATGGTGGGCAAGCCTTCCTCTCACA...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAAGACACAGAACCACTaGTGGTATACTGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFKTQNH*WYTDCE
Trigger: CTCACAGTCAGTATACCAGCAGTGGTTCTGTGTCTT...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCAAGACACAGAACCACTaGTGGTATACTGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSKTQNH*WYTDCE
Trigger: CTCACAGTCAGTATACCAGCAGTGGTTCTGTGTCTT...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATGGCTGGAAGAATTTGTaGTCACCCCCATCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHGWKNL*SPPSGR
Trigger: ACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCC...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGGGAGAGCCACGCTCATaGTTTGGAGTGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKGEPRS*FGVEPL
Trigger: CAGTGGTTCCACTCCAAAGCATGAGCGTGGCTCTCC...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCAGTTTGTTGTCCCCTaGAAGGTTATACAGATTAAC +
Preference number: 4 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSQFVVP*KVIQIN
Trigger: GTTAATCTGTATAACCTTCCAGGGGACAACAAACTG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCTCATCGTCACAGGGATaGACATACATCTTTGAACAA +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPISSSQG*TYIFEQ
Trigger: TTGTTCAAAGATGTATGTCCATCCCTGTGACGATGA...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCAGTGGTACCACTCATTaGGTTGTTGCCTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSSGTTH*VVACGH
Trigger: ATGACCACAGGCAACAACCCAATGAGTGGTACCACT...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCCGGAAAGGTGTTGGTTaGTGTAGTGGTACCACTCAT +
Preference number: 4 (lower is better)
Translates to: PELIGDLALEDGGVPGTGRKGVG*CSGTTH
Trigger: ATGAGTGGTACCACTACACCAACCAACACCTTTCCG...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGTGGTGTGGCAACACCTaGGGGAGTCTGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKWCGNT*GSLRSS
Trigger: GGAAGATCTCAGACTCCCCCAGGTGTTGCCACACCA...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATGATTTTGGGAATGGGTaGTGTGGCAACACCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHDFGNG*CGNTWG
Trigger: CCCCCAGGTGTTGCCACACCACCCATTCCCAAAATC...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCGAAGAGGAGGAAGAATaGCTATGGTGGCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSEEEEE*LWWLLL
Trigger: CAGCAAAAGCCACCATAGCCATTCTTCCTCCTCTTC...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCCTCTGTGCTGTATTCTaGAAGTGGTCGGATACCATC +
Preference number: 4 (lower is better)
Translates to: PELIGDLALEDGGVPGTGLCAVF*KWSDTI
Trigger: GATGGTATCCGACCACTTCCAGAATACAGCACAGAG...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACACTGCAAACAAAATGCTaGGATGCAGACTTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTLQTKC*DADFWH
Trigger: GTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCCCAGTTTACTCATTTTaGTATTTGTTGGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPIPVYSF*YLLALH
Trigger: ATGCAGGGCCAACAAATACCAAAATGAGTAAACTGG...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp TCAGTGTCTGCCTTCTTCCGCTTTGGAGGCTTATCTTaGCTTTTCCCATCATTAGAAGGGGTCCGACTGCGC +
Preference number: 4 (lower is better)
Translates to: SVSAFFRFGGLS*LFPSLEGVRLR
Trigger: GCGCAGTCGGACCCCTTCTAATGATGGGAAAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCAGACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp ATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTCAGCTGACCAAATGTTaGTGCCCTCCAGAACTCATC +
Preference number: 4 (lower is better)
Translates to: MLMPSRTHHNPLLLVGQPQLTKC*CPPELI
Trigger: GATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTG...AGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR TCA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGCACATAGAACATATCTaGCGTGATGTAACATTCAGT +
Preference number: 4 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKHIEHI*RDVTFS
Trigger: ACTGAATGTTACATCACGTCAGATATGTTCTATGTG...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGTCCTTCAATTGTCACTaGTGCATTCATGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FLVLLLPEHISMRGEPEESFNCH*CIHAQR
Trigger: TCTTTGGGCATGAATGCATCAGTGACAATTGAAGGA...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGACAGCTCACATGTGTTaGGTCCTGCACATCCATTAC +
Preference number: 4 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGTAHMC*VLHIHY
Trigger: GTAATGGATGTGCAGGACTCAACACATGTGAGCTGT...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGCTGGGGTGTCGGCTTaGATGGTTTCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSAGVSA*MVSAFL
Trigger: GAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGTCAAACAGGGTACTCTaGGAATGCCCAGAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGSNRVL*ECPELE
Trigger: TTCAAGCTCTGGGCATTCTCAGAGTACCCTGTTTGA...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCGTGGCTTTTGCTGCCTaGGGAAGACACAGAACCACT +
Preference number: 4 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGVAFAA*GRHRTT
Trigger: AGTGGTTCTGTGTCTTCCTCAGGCAGCAAAAGCCAC...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCGCCTCCAGGTGGCCTTaGATGAGAAGGGGATATGTT +
Preference number: 4 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGASRWP*MRRGYV
Trigger: AACATATCCCCTTCTCATTCAAGGCCACCTGGAGGC...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATAGAACCACCAGAACCTaGACTGATAGGGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHRTTRT*TDRGLG
Trigger: GCCAAGTCCCCTATCAGTTCAGGTTCTGGTGGTTCT...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCCTGAAACTCTCCTCCTaGCATGTTATGTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGLKLSS*HVMFGG
Trigger: TCCTCCAAACATAACATGTCAGGAGGAGAGTTTCAG...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATTTCTCACGCTTGCCCTaGAACTCTCCTCCTGACATG +
Preference number: 4 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHFSRLP*NSPPDM
Trigger: CATGTCAGGAGGAGAGTTTCAGGGCAAGCGTGAGAA...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCAAACCTTACTGCATCTaGAAACATGTTTACATCCCA +
Preference number: 4 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPIKPYCI*KHVYIP
Trigger: TGGGATGTAAACATGTTTTCAGATGCAGTAAGGTTT...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCGAAATCCAACCTGGCTaGATGTCTGAGAGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSEIQPG*MSERLL
Trigger: TAGCAGCCTCTCAGACATTCAGCCAGGTTGGATTTC...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTTTTGAAACAGAAGAATaGGTACACCTAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFFETEE*VHLDRR
Trigger: CCTCCTGTCTAGGTGTACTCATTCTTCTGTTTCAAA...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAAGATAGGTAGAAGTTaGCTTCATGTCCTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFKIGRS*LHVLAF
Trigger: GAAGGCAAGGACATGAAGTCAACTTCTACCTATCTT...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATAGCAAGAAGAGAAGGGTaGTCGAGGCCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: LASEMLSTSCPSKTNSRIARREG*SRPPPS
Trigger: AGATGGCGGCGGCCTCGAGCACCCTTCTCTTCTTGC...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGGCAAGAAGAGAAGGGTaGTCGAGGCCGCCGCCATCT +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRARREG*SRPPPS
Trigger: AGATGGCGGCGGCCTCGAGCACCCTTCTCTTCTTGC...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACACAGTTCATACAGGGGTaGATAAGTTGGTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTQFIQG*ISWLSF
Trigger: GAAACTCAACCAACTTATGCACCCCTGTATGAACTG...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCACATGTGTTGAGTCCTaGACATCCATTACCACACAC +
Preference number: 4 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSTCVES*TSITTH
Trigger: GTGTGTGGTAATGGATGTGCAGGACTCAACACATGT...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGATCTGTGCAGATCAGTaGATCCGACAGCCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWICADQ*IRQPFV
Trigger: TACAAAGGGCTGTCGGATGCACTGATCTGCACAGAT...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGATCTGTGCAGATCAGTaGATCCGACAGCCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGICADQ*IRQPFV
Trigger: TACAAAGGGCTGTCGGATGCACTGATCTGCACAGAT...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCCCGGAAGAGGAGTTCTaGCTTTCTAAAGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTPEEEF*LSKGLL
Trigger: AAGCAGCCCTTTAGAAAGGCAGAACTCCTCTTCCGG...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCAATCTCGAAGAGGGGTaGCAATGGCTGGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSNLEEG*QWLGNH
Trigger: ATGATTGCCCAGCCATTGGCACCCCTCTTCGAGATT...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGCCACTGCTCAGTCCATaGTTGGTTATGGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKPLLSP*LVMGEE
Trigger: CTCCTCTCCCATAACCAAGCATGGACTGAGCAGTGG...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCACTGATGATAATTTTTaGCACACCTGTGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: MEEFQEQASLERQACQSLTDDNF*HTCAPH
Trigger: GTGGGGAGCACAGGTGTGGCAAAAATTATCATCAGT...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCGTTGAACAACCTTCATaGAAATGCATCAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGVEQPS*KCIKEC
Trigger: ACATTCCTTGATGCATTTGCATGAAGGTTGTTCAAC...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTTGGTTAAATTTTGCATaGAGCCGTTCCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFWLNFA*SRSRRE
Trigger: TTCTCTCCTGGAACGGCTCCATGCAAAATTTAACCA...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACACATTCTGTCTTGCTATaGACTCCAAACGATCAGTCA +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTHSVLL*TPNDQS
Trigger: TGACTGATCGTTTGGAGTCCATAGCAAGACAGAATG...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCCAGGGGTGCATAAGTTaGTTGAGTTTCAAACAATGG +
Preference number: 4 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSQGCIS*LSFKQW
Trigger: CCATTGTTTGAAACTCAACCAACTTATGCACCCCTG...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCGGACACACTTCAAATTaGAGAAGCCCAGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGGHTSN*RSPGES
Trigger: AGATTCTCCTGGGCTTCTCCAATTTGAAGTGTGTCC...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTTGGGTTGTTGCCTGTaGTCATGCCATACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSLGCCL*SCHTLG
Trigger: GCCCAGGGTATGGCATGACCACAGGCAACAACCCAA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCTTGGGGGTGAGGTACTaGTTGTGGGTAAGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTLGVRY*LWVSCW
Trigger: CCAACAACTTACCCACAACCAGTACCTCACCCCCAA...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGGATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCTTGGAGGACATAGGATaGCTGGAAGAATTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RMEEFQEQASLERQACQSLEDIG*LEEFVL
Trigger: GAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA...GCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCAAGATTTCTCTGCTATaGAGGAGCCTGACTCACTTT +
Preference number: 4 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSKISLL*RSLTHF
Trigger: AAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATCTT...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTCGGGAAGGATCAATCTaGAGTCCCCGGCGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: NLSRVTNLKPGFGNYILRREGSI*SPRRQE
Trigger: TTCTTGCCGCCGGGGACTTCAGATTGATCCTTCCCG...ACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCTCCTCGGTTTCCCCCTaGGCTTTCATCCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LTNLLGLDATVLAQAISSSSVSP*AFILKA
Trigger: CGCCTTCAGGATGAAAGCTCAGGGGGAAACCGAGGA...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTATGTCTCCAAACAGCTaGCCAAATGTTGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: MLMPSRTHHNPLLLVGQPMSPNS*PNVDAL
Trigger: GAGGGCATCAACATTTGGTCAGCTGTTTGGAGACAT...AGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR TCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCGGATTCTCCCCATGGTaGGCCACTTTTACATCACAA +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSGFSPW*ATFTSQ
Trigger: TTGTGATGTAAAAGTGGCTCACCATGGGGAGAATCC...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCTTTGATAGCTCAAACTaGGTGATCAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSFDSSN*VISSYR
Trigger: CCTGTATGAACTGATCACTCAGTTTGAGCTATCAAA...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAACTCGGCCAGGGTGCTaGAAGGTGATTTTGCTAACA +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPTRPGC*KVILLT
Trigger: TGTTAGCAAAATCACCTTTCAGCACCCTGGCCGAGT...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCGCTGAAAAGATACGCTaGAACGAGACTCTGAGAGAG +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSAEKIR*NETLRE
Trigger: CTCTCTCAGAGTCTCGTTTCAGCGTATCTTTTCAGC...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCTCTGAGACACCTTGCTaGAGTCCTCCCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: LTNLLGLDATVLAQAISSSETPC*SPPHGP
Trigger: TGGGCCATGGGGAGGACTTCAGCAAGGTGTCTCAGA...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTCTGTTAGAAGAACTATaGGATGGAGACTTTCCCTCA +
Preference number: 4 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSALLEEL*DGDFPS
Trigger: TGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAG...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCTTAGAAGAATCCACTaGACTCCCGGAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHLRRIH*TPGGGN
Trigger: GTTTCCACCTCCGGGAGTTCAGTGGATTCTTCTAAG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTGTGAAGGGCTCTTATTaGTGTCCCCCAGAATCCAGA +
Preference number: 4 (lower is better)
Translates to: FWYLLALHGGAEPMILFSVKGSY*CPPESR
Trigger: TCTGGATTCTGGGGGACATCAATAAGAGCCCTTCAC...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTGGACCCTCCAAATACTaGGAACTTCTGTTGCACTCG +
Preference number: 4 (lower is better)
Translates to: FWYLLALHGGAEPMILFSGPSKY*ELLLHS
Trigger: CGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCC...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCAGGCCGCAGAATTTTTaGGAGGACCCTCCAAATACT +
Preference number: 4 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTRPQNF*EDPPNT
Trigger: AGTATTTGGAGGGTCCTCTCAAAAATTCTGCGGCCT...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTGGTTCTCAGGCAGGGTaGAGCAGTTTAGCCCCGGCT +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFGSQAG*SSLAPA
Trigger: AGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACC...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTGGCTGCAAAACATGACTTaGCGCACAAGCTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: VDALQNSSQPSSPCWSAWLQNMT*RTSLMV
Trigger: AACCATTAAGCTTGTGCGTCAAGTCATGTTTTGCAG...CCAGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR GCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTTCACTGATGCATTCATaGCCAAAGATCGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFSLMHS*PKIEKH
Trigger: ATGTTTCTCGATCTTTGGGCATGAATGCATCAGTGA...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCCAGTTCATACAGGGGTaGATAAGTTGGTTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGQFIQG*ISWLSF
Trigger: GAAACTCAACCAACTTATGCACCCCTGTATGAACTG...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAGTCTTCAACTGTCTCTaGAATGAGGGACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPVFNCL*NEGQCW
Trigger: CCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGAC...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCCGGAAGAGGAGTTCTaGCTTTCTAAAGGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHPEEEF*LSKGLL
Trigger: AAGCAGCCCTTTAGAAAGGCAGAACTCCTCTTCCGG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTTTCTTGGTCTTGTTaGTCCCCGAGCATATTTCCA +
Preference number: 4 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGFSWSC*SPSIFP
Trigger: TGGAAATATGCTCGGGGAGCAACAAGACCAAGAAAA...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATTCATCTTCAGTCTGGTaGTTTGGTTTCTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDSSSVW*FGFSGG
Trigger: ACCACCTGAGAAACCAAAGCACCAGACTGAAGATGA...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGCACTTTTCTCACGCTTaGCCTGAAACTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLQLTCVESCTSITTHTRHFSHA*PETLLL
Trigger: CAGGAGGAGAGTTTCAGGGCAAGCGTGAGAAAAGTG...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGTGGCATCAGTTCTCCTaGAAACAAAATGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWWHQFS*KQNAGM
Trigger: CATCCCAGCATTTTGTTTGCAGGAGAACTGATGCCA...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCCTCCAGGGTCTATTTTaGTTAAATTTTGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSLQGLF*LNFAWS
Trigger: GCTCCATGCAAAATTTAACCAAAATAGACCCTGGAG...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAATGACCCCCACTCCTTaGTGTGAGATAGCCAACACT +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPMTPTP*CEIANT
Trigger: AGTGTTGGCTATCTCACACCAAGGAGTGGGGGTCAT...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCATGACCCCCACTCCTTaGTGTGAGATAGCCAACACT +
Preference number: 4 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGMTPTP*CEIANT
Trigger: AGTGTTGGCTATCTCACACCAAGGAGTGGGGGTCAT...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACATCTAGATACTGGGATTaGCTGGGGAAATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTSRYWD*LGKFQE
Trigger: TTCTTGAAATTTCCCCAGCCAATCCCAGTATCTAGA...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAAAATGCTCTAGATACTaGGATTGGCTGGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTKCSRY*DWLGKF
Trigger: AAATTTCCCCAGCCAATCCCAGTATCTAGAGCATTT...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTCAGGGGTGCATAAGTTaGTTGAGTTTCAAACAATGG +
Preference number: 4 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSQGCIS*LSFKQW
Trigger: CCATTGTTTGAAACTCAACCAACTTATGCACCCCTG...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCTGTGATTCAAAGGTATaGGGTCAGGGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: PELIGDLALEDGGVPGTGCDSKV*GQGPLI
Trigger: TATCAAAGGACCCTGACCCCATACCTTTGAATCACA...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGTCATCGTCACAGGGATaGACATACATCTTTGAACAA +
Preference number: 4 (lower is better)
Translates to: FLVLLLPEHISMRGEPEESSSQG*TYIFEQ
Trigger: TTGTTCAAAGATGTATGTCCATCCCTGTGACGATGA...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCATTGTGGGTAAGTTGTTaGGGGAGTGCTACACTGGCT +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPLWVSC*GSATLA
Trigger: AGCCAGTGTAGCACTCCCCCAACAACTTACCCACAA...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCTCAACTGTGTCGGCTTaGTTATTGCCCTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: PELIGDLALEDGGVPGTGSTVSA*LLPLNL
Trigger: CAAGTTTAAGGGCAATAACCAAGCCGACACAGTTGA...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCTGCCTTCTTCCGCTTTaGAGGCTTATCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: MEEFQEQASLERQACQSLCLLPL*RLIFAF
Trigger: AAAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCA...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATCTTGGCTTTAGAGGATaGAGGAGTTCCAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHLGFRG*RSSRNR
Trigger: CCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAG...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTCATCTGGCCGTCCAGTaGGTCTTCACCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LRTSVALETVSWISIFLCHLAVQ*VFTPRA
Trigger: GGCCCTGGGGGTGAAGACCCACTGGACGGCCAGATG...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CCATCGACAATTCAGGGGCTTATCCTTCATCCAGATCCTAACTCGGGATTCTTTTTCTCCTCCACCCTGTaGAGAAATGCAGTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PSTIQGLILHPDPNSGFFFSSTL*RNAVLP
Trigger: AGGGAGCACTGCATTTCTCCACAGGGTGGAGGAGAA...AAAGAATCCCGAGTTAGGATCTGGATGAAGGATAAGCCCCTGAATTGTCGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp AAGTCCTCCCCATGGCCCACCGACTCATGCCGATCTTaGATGCTCATGCTCATATTAAACAAGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: KSSPWPTDSCRS*MLMLILNKVVM
Trigger: CATTACCACCTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 72 bp AGCCTTCTGCAATGTCTCCAAACAGCTGACCAAATGTaGATGCCCTCCAGAACTCATCACAACCCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLLQCLQTADQM*MPSRTHHNPLL
Trigger: GAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTGTTTGGAGACATTGCAGAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR TCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGTCCTCGGTTTCCCCCTaGGCTTTCATCCTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMSSVSP*AFILKA
Trigger: CGCCTTCAGGATGAAAGCTCAGGGGGAAACCGAGGA...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCTCTTCTCCATGACTTaGCGCACAAGCTTAATGGTT +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSLFSMT*RTSLMV
Trigger: AACCATTAAGCTTGTGCGTCAAGTCATGGAGAAGAG...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATATGTCTCCAAACAGCTaGCCAAATGTTGATGCCCTC +
Preference number: 4 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHMSPNS*PNVDAL
Trigger: GAGGGCATCAACATTTGGTCAGCTGTTTGGAGACAT...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTCAGTGCCACTGGCACTaGGATGAGAGCCCAGTCCAT +
Preference number: 4 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTIQCHWH*DESPVH
Trigger: ATGGACTGGGCTCTCATCTCAGTGCCAGTGGCACTG...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACACACATAGAACATATCTaGCGTGATGTAACATTCAGT +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTHIEHI*RDVTFS
Trigger: ACTGAATGTTACATCACGTCAGATATGTTCTATGTG...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACCCCACTCCTTGGTGTaGGATAGCCAACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: LQTKCWDADFWHIVEVGEPHSLV*DSQHFH
Trigger: ATGGAAGTGTTGGCTATCTCACACCAAGGAGTGGGG...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTTATTCTCATGCAAAATaGTGGGAGATGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSYSHAK*WEMQSC
Trigger: ACAAGACTGCATCTCCCATCATTTTGCATGAGAATA...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACAGCTCACATGTGTTaGGTCCTGCACATCCATTAC +
Preference number: 4 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPTAHMC*VLHIHY
Trigger: GTAATGGATGTGCAGGACTCAACACATGTGAGCTGT...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CCTGAACTGATAGGGGACTTGGCTTTAGAGGATGGAGGAGTTCCAGGAACAGGCAGCTTTGCCGGCTACTaGAATAATACTGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: PELIGDLALEDGGVPGTGSFAGY*NNTEIN
Trigger: GTTGATTTCAGTATTATTTCAGTAGCCGGCAAAGCT...GCCTGTTCCTGGAACTCCTCCATCCTCTAAAGCCAAGTCCCCTATCAGTTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATGATGATGGCTTTCCTTaGGGTTTCATCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHDDGFP*GFILVL
Trigger: CAGCACCAAGATGAAACCTCAAGGAAAGCCATCATC...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACCTTCATGCCAGAGCTTaGACTAGTTCCAGACATATG +
Preference number: 4 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNLHARA*TSSRHM
Trigger: CATATGTCTGGAACTAGTTCAAGCTCTGGCATGAAG...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGCTCCCATGCTGGTTCTaGGAGGATGACATGGAAGAG +
Preference number: 4 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKLPCWF*EDDMEE
Trigger: CTCTTCCATGTCATCCTCTCAGAACCAGCATGGGAG...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGGCTTCAGTTTATCTATaGCAGCTGTCAAGGACGGCT +
Preference number: 4 (lower is better)
Translates to: SLQLTCVESCTSITTHTRASVYL*QLSRTA
Trigger: AGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGC...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAGGAGGTGGAAACCTTTaGTTTGTCTTTATCACTTTT +
Preference number: 4 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTGGGNL*FVFITF
Trigger: AAAAGTGATAAAGACAAATCAAAGGTTTCCACCTCC...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGTTAGAAGAAGCCATTTaGGGCCTAAGCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKLEEAI*GLSPSP
Trigger: TGGAGAAGGGCTTAGGCCTCAAATGGCTTCTTCTAA...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTGGGGGTATATGCTGGTaGCTTACTATGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSGGICW*LTMAGR
Trigger: TCTCCCAGCCATAGTAAGTCACCAGCATATACCCCC...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGTGCTATGGAGGAGCCTaGCTCACTTTCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLCYGGA*LTFTVQ
Trigger: CTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCA...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCCACCACGCCCAGCCATaGAAACTCTATAAAATCTTG +
Preference number: 4 (lower is better)
Translates to: NVDALQNSSQPSSPCWSAHHAQP*KLYKIL
Trigger: CAAGATTTTATAGAGTTTTCATGGCTGGGCGTGGTG...GGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR GCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTACAATGGAATTCCTGTaGAGTTCTGCAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSTMEFL*SSAVSE
Trigger: TTCAGAAACTGCAGAACTGCACAGGAATTCCATTGT...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTACAATGGAATTCCTGTaGAGTTCTGCAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSATMEFL*SSAVSE
Trigger: TTCAGAAACTGCAGAACTGCACAGGAATTCCATTGT...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTCCGAGCATATTTCCATaGGGGGTGAGCCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSPSIFP*GVSRKR
Trigger: CCTCTTCCGGCTCACCCCGCATGGAAATATGCTCGG...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGGCTTCCAGCAGCATCTaGAATAAGATCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKASSSI*NKISWI
Trigger: GATCCAGCTGATCTTATTGCAGATGCTGCTGGAAGC...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTGGTATTTGTTGGCCCTaGATGGGGGAGCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFGICWP*MGELSP
Trigger: TGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACC...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTTTGACTTCATGTCCTTaGCTTCTTTTGAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFLTSCP*LLLKQK
Trigger: CTTCTGTTTCAAAAGAAGGCAAGGACATGAAGTCAA...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTATGTTAAGTACTTCCTaGCCCTCCAAAACTAACTCA +
Preference number: 4 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSMLSTS*PSKTNS
Trigger: TGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACAT...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGCATTCTGTCTTGCTATaGACTCCAAACGATCAGTCA +
Preference number: 4 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGHSVLL*TPNDQS
Trigger: TGACTGATCGTTTGGAGTCCATAGCAAGACAGAATG...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGTTGGGTTGTTGCCTGTaGTCATGCCATACCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRLGCCL*SCHTLG
Trigger: GCCCAGGGTATGGCATGACCACAGGCAACAACCCAA...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTCATCGAAGAGACAGGTaGCGGCGTGTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTIHRRDR*RRVMRR
Trigger: CCTCCTCATCACACGCCGCCACCTGTCTCTTCGATG...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGGCATCGGGTGGTTCTTaGTGTTGCCGGCCATCGAAG +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMASGGS*CCRPSK
Trigger: CTTCGATGGCCGGCAACACCAAGAACCACCCGATGC...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCAGGGTTGAGAAATCCTaGGCAGGATTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: MEEFQEQASLERQACQSLRVEKS*AGLSLR
Trigger: TCTTAAAGATAATCCTGCCCAGGATTTCTCAACCCT...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCCACTCATGACTTCTTTTTCTTaGTCTTGTTGCTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: GAEPMILFSTFPLRFSPLMTSFS*SCCSPS
Trigger: GCTCGGGGAGCAACAAGACCAAGAAAAAGAAGTCAT...GAGTGGGGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGCTGGAGTGATGTGTaGCGTATCCAGCGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDSWSDV*RIQRVS
Trigger: GCTGACACGCTGGATACGCCACACATCACTCCAGCT...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTAGCTGGAGTGATGTGTaGCGTATCCAGCGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLSWSDV*RIQRVS
Trigger: GCTGACACGCTGGATACGCCACACATCACTCCAGCT...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCCCATCCTTTGAATACTaGGTTGGGGGTGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSPSFEY*VGGEVL
Trigger: CAGTACCTCACCCCCAACCCAGTATTCAAAGGATGG...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTAGAGAGTACTATTACTaGTGCCATTGCCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSAREYYY*CHCLPL
Trigger: TAAAGGAAGGCAATGGCACCAGTAATAGTACTCTCT...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCAGGAACAGGCTTCATTaGAGAGGCAAGCTTGTCAGA +
Preference number: 4 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGRNRLH*RGKLVR
Trigger: TCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCT...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGGCTGGTGACTTACTATaGCTGGGAGAGCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRAGDLL*LGEPRS
Trigger: TGAGCGTGGCTCTCCCAGCCATAGTAAGTCACCAGC...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACTCTGTGCTGTATTCTaGAAGTGGTCGGATACCATC +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPLCAVF*KWSDTI
Trigger: GATGGTATCCGACCACTTCCAGAATACAGCACAGAG...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCATACTGTATGACTCACTaGCTCCCTGAAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPYCMTH*LPERAS
Trigger: AGAAGCCCTTTCAGGGAGCCAGTGAGTCATACAGTA...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACACCACTGGCACTGAGATaGGAGCCCAGTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETPLALR*EPSPFC
Trigger: ACAGAATGGACTGGGCTCTCATCTCAGTGCCAGTGG...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTCCCCACTCCTTGGTGTaGGATAGCCAACACTTCCAT +
Preference number: 4 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLPHSLV*DSQHFH
Trigger: ATGGAAGTGTTGGCTATCTCACACCAAGGAGTGGGG...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTTCATTCACAGGGTGCTaGAAAGATACGCTGAAACGA +
Preference number: 4 (lower is better)
Translates to: FWYLLALHGGAEPMILFSSFTGC*KDTLKR
Trigger: TCGTTTCAGCGTATCTTTTCAGCACCCTGTGAATGA...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTATGGACATACATCTTTaGACAACTTTGGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSAMDIHL*TTLAMK
Trigger: CTTCATTGCCAAAGTTGTTCAAAGATGTATGTCCAT...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGGCTGGGGTGTCGGCTTaGATGGTTTCAGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMAGVSA*MVSAFL
Trigger: GAGGAAAGCTGAAACCATTCAAGCCGACACCCCAGC...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACACAACTGTCTCTGCAATaGGGGACAGTGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETQLSLQ*GTVLGC
Trigger: ACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTG...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTCAACTGTCTCTGCAATaGGGGACAGTGCTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFQLSLQ*GTVLGC
Trigger: ACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTG...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGTAAGAATTGGGTTCTaGGACACCTTGCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSVRIGF*DTLLKS
Trigger: GGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTAC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTGTCCAAAATGACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCCAGGTGGCCTTGAATaGGAAGGGGATATGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VSKMTKVLHLPMTQTDNYPGGLE*EGDMFG
Trigger: ACCAAACATATCCCCTTCTCATTCAAGGCCACCTGG...GTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTCATTTTGGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGCTAGTTCCAGACATATaGGAACCACCAGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKLVPDI*EPPEPE
Trigger: TTCAGGTTCTGGTGGTTCTCATATGTCTGGAACTAG...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CCATCGACAATTCAGGGGCTTATCCTTCATCCAGATCCTAACTCGGGATTCTTTTCGGATACCATCGTCTaGGCTGGGACTATTCTGATA +
Preference number: 4 (lower is better)
Translates to: PSTIQGLILHPDPNSGFFSDTIV*AGTILI
Trigger: TATCAGAATAGTCCCAGCTCAGACGATGGTATCCGA...AAAGAATCCCGAGTTAGGATCTGGATGAAGGATAAGCCCCTGAATTGTCGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGACCTGGCTGAATGTCTaGGAGGCTGCTACTGTATCA +
Preference number: 4 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKTWLNV*EAATVS
Trigger: TGATACAGTAGCAGCCTCTCAGACATTCAGCCAGGT...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTGGGTCAGTGTGGGGGTaGGCCCATCGACAATTCAGG +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLGSVWG*AHRQFR
Trigger: CCTGAATTGTCGATGGGCTCACCCCCACACTGACCC...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTGGTGGTTCTTGGTGTTaGCGGCCATCGAAGAGACAG +
Preference number: 4 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSGGSWC*RPSKRQ
Trigger: CTGTCTCTTCGATGGCCGGCAACACCAAGAACCACC...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCAAGTTGTTGGGGGAGTaGTACACTGGCTTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LTNLLGLDATVLAQAISSKLLGE*YTGLEL
Trigger: CAGCTCCAAGCCAGTGTAGCACTCCCCCAACAACTT...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTAATCTCGAAGAGGGGTaGCAATGGCTGGGCAATCAT +
Preference number: 4 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSNLEEG*QWLGNH
Trigger: ATGATTGCCCAGCCATTGGCACCCCTCTTCGAGATT...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGGGCTGGAAGAATTTGTaGTCACCCCCATCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMGWKNL*SPPSGR
Trigger: ACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCC...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTGGAGAGCCACGCTCATaGTTTGGAGTGGAACCACTG +
Preference number: 4 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTIGEPRS*FGVEPL
Trigger: CAGTGGTTCCACTCCAAAGCATGAGCGTGGCTCTCC...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp GTGTCCAAAATGACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACTTAAGCAAGTTCAGATaGTGGGTCAGTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: VSKMTKVLHLPMTQTDNYLSKFR*WVSVGV
Trigger: CACCCCCACACTGACCCAGCATCTGAACTTGCTTAA...GTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTCATTTTGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAACGGAGGAAACAAGTTaGCTCGGGATCCCGGGACGC +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIITEETS*LGIPGR
Trigger: GCGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGT...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACATTCATGAGCATCGGGTaGTTCTTGGTGTTGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETFMSIG*FLVLPA
Trigger: GGCCGGCAACACCAAGAACCACCCGATGCTCATGAA...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGTGAGGTACTGGTTGTaGGTAAGTTGTTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLVRYWL*VSCWGS
Trigger: ACTCCCCCAACAACTTACCCACAACCAGTACCTCAC...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGCCATCCTTTGAATACTaGGTTGGGGGTGAGGTACTG +
Preference number: 4 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLPSFEY*VGGEVL
Trigger: CAGTACCTCACCCCCAACCCAGTATTCAAAGGATGG...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCCAATGCTGTCTGAACTaGATAGTCGGACCATCCTTT +
Preference number: 4 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGQCCLN*IVGPSF
Trigger: AAAGGATGGTCCGACTATCCAGTTCAGACAGCATTG...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGAAACCACTTTGGCTCTaGCTGTTCAATAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGKPLWL*LFNKSG
Trigger: TCCTGATTTATTGAACAGCCAGAGCCAAAGTGGTTT...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACATGGTGTGGCAACACCTaGGGGAGTCTGAGATCTTCC +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETWCGNT*GSLRSS
Trigger: GGAAGATCTCAGACTCCCCCAGGTGTTGCCACACCA...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACAGTCCATGCTTGGTTATaGGAGAGGAGCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETVHAWL*ERSLAS
Trigger: GGAAGCCAGGCTCCTCTCCCATAACCAAGCATGGAC...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGTGCTCAGTCCATGCTTaGTTATGGGAGAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRCSVHA*LWERSL
Trigger: CAGGCTCCTCTCCCATAACCAAGCATGGACTGAGCA...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTTGCTCAGTCCATGCTTaGTTATGGGAGAGGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLCSVHA*LWERSL
Trigger: CAGGCTCCTCTCCCATAACCAAGCATGGACTGAGCA...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACTGAACTCCCGGAGGTaGAAACCTTTGATTTGTCTT +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPLNSRR*KPLICL
Trigger: AAGACAAATCAAAGGTTTCCACCTCCGGGAGTTCAG...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTAGTCTTCAGTTTGTTGTCCCCTGGAAGGTTATACAGATTAACAAGGCCCTTAGCTGGTGACTTACTATaGCTGGGAGAGCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: LVFSLLSPGRLYRLTRPLAGDLL*LGEPRS
Trigger: TGAGCGTGGCTCTCCCAGCCATAGTAAGTCACCAGC...TAAGGGCCTTGTTAATCTGTATAACCTTCCAGGGGACAACAAACTGAAGACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCAAGATTTCTCTGCTATaGAGGAGCCTGACTCACTTT +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSKISLL*RSLTHF
Trigger: AAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATCTT...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GTGTCCAAAATGACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCATTTTGGTATTTGTTaGCCCTGCATGGGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSKMTKVLHLPMTQTDNYHFGIC*PCMGEL
Trigger: CAGCTCCCCCATGCAGGGCCAACAAATACCAAAATG...GTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTCATTTTGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp AAATCAACTGTGTCGGCTTGGTTATTGCCCTTAAACTaGGTCTCCCCATTATCACCTCCAAGCATTGGCACC +
Preference number: 4 (lower is better)
Translates to: KSTVSAWLLPLN*VSPLSPPSIGT
Trigger: GGTGCCAATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGACACAGTTGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 72 bp TTGGAGAGGCAAGCTTGTCAGAGCCTCCAGGTGGCCTaGAATGAGAAGGGGATATGTTTGGTTTACTTAAAG +
Preference number: 4 (lower is better)
Translates to: LERQACQSLQVA*NEKGICLVYLK
Trigger: CTTTAAGTAAACCAAACATATCCCCTTCTCATTCAAGGCCACCTGGAGGCTCTGACAAGCTTGCCTCTCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATCAGCTGACCAAATGTTaGTGCCCTCCAGAACTCATC +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDQLTKC*CPPELI
Trigger: GATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTG...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACTATTCTCATGCAAAATaGTGGGAGATGCAGTCTTGT +
Preference number: 4 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNYSHAK*WEMQSC
Trigger: ACAAGACTGCATCTCCCATCATTTTGCATGAGAATA...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCATAGCTCAAACTGAGTaGTCAGTTCATACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSIAQTE*SVHTGV
Trigger: CACCCCTGTATGAACTGATCACTCAGTTTGAGCTAT...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTCATTCACAGGGTGCTaGAAAGATACGCTGAAACGA +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSSFTGC*KDTLKR
Trigger: TCGTTTCAGCGTATCTTTTCAGCACCCTGTGAATGA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCAGCTTTGCCGGCTACTaGAATAATACTGAAATCAAC +
Preference number: 4 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTSFAGY*NNTEIN
Trigger: GTTGATTTCAGTATTATTTCAGTAGCCGGCAAAGCT...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACGTTCCCTTAGGAATCTaGATAGTGATTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNVPLGI*IVILGM
Trigger: CATTCCCAAAATCACTATTCAGATTCCTAAGGGAAC...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTAGAACCACCAGAACCTaGACTGATAGGGGACTTGGC +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFRTTRT*TDRGLG
Trigger: GCCAAGTCCCCTATCAGTTCAGGTTCTGGTGGTTCT...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTCGTACAGGAATTAGATaGTGGGGGAGTTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSRTGIR*WGSFLG
Trigger: TCCCAGAAAACTCCCCCATCATCTAATTCCTGTACG...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTTCGGATACCATCGTCTaGGCTGGGACTATTCTGATA +
Preference number: 4 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSSDTIV*AGTILI
Trigger: TATCAGAATAGTCCCAGCTCAGACGATGGTATCCGA...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCAAAGAAAGCCAAAGCTaGTTTTCCAACTCTATGCTG +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSKESQS*FSNSML
Trigger: CAGCATAGAGTTGGAAAATCAGCTTTGGCTTTCTTT...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATGGGGAGCTGAGCCCATaGTACTATTCAGTACATTCC +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDGELSP*YYSVHS
Trigger: GGAATGTACTGAATAGTATCATGGGCTCAGCTCCCC...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCGGAATCAGGTCAAACTaGGAATACATAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPGIRSN*EYIRHQ
Trigger: CTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCC...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCTGCACTTAATTTTCTaGTCTAGGCCTGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSLHLIF*SRPEER
Trigger: TCTTTCTTCAGGCCTAGATCAGAAAATTAAGTGCAG...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATGGGACCAGCATTAGTTaGTTTCCAGTACATAATTGC +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHGTSIS*FPVHNC
Trigger: GCAATTATGTACTGGAAAGCAACTAATGCTGGTCCC...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATCACTCATTGGGTTGTTaGCTGTGGTCATGCCATACC +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDHSLGC*LWSCHT
Trigger: GGTATGGCATGACCACAGGCAACAACCCAATGAGTG...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CCATCGACAATTCAGGGGCTTATCCTTCATCCAGATCCTAACTCGGGATTCTTTGAGTACTATTACTGGTaGCATTGCCTTCCTTTACCC +
Preference number: 4 (lower is better)
Translates to: PSTIQGLILHPDPNSGFFEYYYW*HCLPLP
Trigger: GGGTAAAGGAAGGCAATGGCACCAGTAATAGTACTC...AAAGAATCCCGAGTTAGGATCTGGATGAAGGATAAGCCCCTGAATTGTCGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATCACTTTTCTCACGCTTaGCCTGAAACTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDHFSHA*PETLLL
Trigger: CAGGAGGAGAGTTTCAGGGCAAGCGTGAGAAAAGTG...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATATTAAGCAAGTTCAGATaGTGGGTCAGTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LASEMLSTSCPSKTNSRILSKFR*WVSVGV
Trigger: CACCCCCACACTGACCCAGCATCTGAACTTGCTTAA...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp ATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTCTCCAGGGTCTATTTTaGTTAAATTTTGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: MLMPSRTHHNPLLLVGQPLQGLF*LNFAWS
Trigger: GCTCCATGCAAAATTTAACCAAAATAGACCCTGGAG...AGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR CCA 90 bp GGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCCACTCCAGTTTGTTGTCCCCTaGAAGGTTATACAGATTAAC +
Preference number: 4 (lower is better)
Translates to: GAEPMILFSTFPLRFSPLQFVVP*KVIQIN
Trigger: GTTAATCTGTATAACCTTCCAGGGGACAACAAACTG...GAGTGGGGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAATGCTCTAGATACTaGGATTGGCTGGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNKCSRY*DWLGKF
Trigger: AAATTTCCCCAGCCAATCCCAGTATCTAGAGCATTT...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCATGTGATTCAAAGGTATaGGGTCAGGGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPCDSKV*GQGPLI
Trigger: TATCAAAGGACCCTGACCCCATACCTTTGAATCACA...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACAAACTGGTAAGAATTaGGTTCTGAGACACCTTGCT +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPQTGKN*VLRHLA
Trigger: AGCAAGGTGTCTCAGAACCCAATTCTTACCAGTTTG...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCATGACTTCTTTTTCTTaGTCTTGTTGCTCCCCGAGC +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSMTSFS*SCCSPS
Trigger: GCTCGGGGAGCAACAAGACCAAGAAAAAGAAGTCAT...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTAGGGGTGCCAATGGCTaGGCAATCATCACTAGTGCT +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFRGANG*AIITSA
Trigger: AGCACTAGTGATGATTGCCCAGCCATTGGCACCCCT...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTTCCCTAAGTCCCCAGTaGTCAGTAAAGGACCCTGAC +
Preference number: 4 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTISLSPQ*SVKDPD
Trigger: GTCAGGGTCCTTTACTGACCACTGGGGACTTAGGGA...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCATCCCTAAGTCCCCAGTaGTCAGTAAAGGACCCTGAC +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSSLSPQ*SVKDPD
Trigger: GTCAGGGTCCTTTACTGACCACTGGGGACTTAGGGA...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGAAGAATGGCTATGGTaGCTTTTGCTGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLEEWLW*LLLPEE
Trigger: TTCCTCAGGCAGCAAAAGCCACCATAGCCATTCTTC...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTGAAGAATGGCTATGGTaGCTTTTGCTGCCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSEEWLW*LLLPEE
Trigger: TTCCTCAGGCAGCAAAAGCCACCATAGCCATTCTTC...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGGAAGAGGAGGAAGAATaGCTATGGTGGCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKEEEEE*LWWLLL
Trigger: CAGCAAAAGCCACCATAGCCATTCTTCCTCCTCTTC...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGTACTGCTACTTAACTTaGAACTTGATGAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGYCYLT*NLMNLL
Trigger: CAGAAGGTTCATCAAGTTCCAAGTTAAGTAGCAGTA...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CCATCGACAATTCAGGGGCTTATCCTTCATCCAGATCCTAACTCGGGATTCTTTGATCCAGAAGACCCCTaGCTAGAATACATACTGCTA +
Preference number: 4 (lower is better)
Translates to: PSTIQGLILHPDPNSGFFDPEDP*LEYILL
Trigger: TAGCAGTATGTATTCTAGCCAGGGGTCTTCTGGATC...AAAGAATCCCGAGTTAGGATCTGGATGAAGGATAAGCCCCTGAATTGTCGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCGGAACCACTGATGAGTaGAGAGCCATAGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGGTTDE*RAIVFR
Trigger: TCTAAAAACTATGGCTCTCCACTCATCAGTGGTTCC...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCAGCCACGCTCATGCTTTaGAGTGGAACCACTGATGAG +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSATLML*SGTTDE
Trigger: CTCATCAGTGGTTCCACTCCAAAGCATGAGCGTGGC...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 72 bp GGTTTCTCAGGTGGTAATCTTGATGACTTCTTTTTCTaGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGG +
Preference number: 4 (lower is better)
Translates to: GFSGGNLDDFFF*VLLLPEHISMR
Trigger: CCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAAAAAGAAGTCATCAAGATTACCACCTGAGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCGTAAAGATGTTACTTTaGGAGCCTTCTGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPVKMLL*EPSAMS
Trigger: AGACATTGCAGAAGGCTCTCAAAGTAACATCTTTAC...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATAGGATTCTCCCCATGGTaGGCCACTTTTACATCACAA +
Preference number: 4 (lower is better)
Translates to: LASEMLSTSCPSKTNSRIGFSPW*ATFTSQ
Trigger: TTGTGATGTAAAAGTGGCTCACCATGGGGAGAATCC...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp AATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTTCAGGTTCATTAAATaGCCCCCACTCCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: NLSRVTNLKPGFGNYILRFRFIK*PPLLGV
Trigger: CACACCAAGGAGTGGGGGTCATTTAATGAACCTGAA...ACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGATAGCTCAAACTGAGTaGTCAGTTCATACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKIAQTE*SVHTGV
Trigger: CACCCCTGTATGAACTGATCACTCAGTTTGAGCTAT...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCTTTGATAGCTCAAACTaGGTGATCAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPFDSSN*VISSYR
Trigger: CCTGTATGAACTGATCACTCAGTTTGAGCTATCAAA...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCAAGAATGCCCAGAGCTTaGAGAATCTCGAAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSRMPRA*RISKRG
Trigger: ACCCCTCTTCGAGATTCTTCAAGCTCTGGGCATTCT...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAGAGATGCAAATCCTTTaGAATCATCATTATCCCCAC +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPEMQIL*NHHYPH
Trigger: GTGGGGATAATGATGATTTCAAAGGATTTGCATCTC...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCACCAGGTGGCCTTGAATaGGAAGGGGATATGTTTGGT +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSPGGLE*EGDMFG
Trigger: ACCAAACATATCCCCTTCTCATTCAAGGCCACCTGG...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGTTAGAAGAAGCCATTTaGGGCCTAAGCCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRLEEAI*GLSPSP
Trigger: TGGAGAAGGGCTTAGGCCTCAAATGGCTTCTTCTAA...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCGGGGGTATATGCTGGTaGCTTACTATGGCTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPGGICW*LTMAGR
Trigger: TCTCCCAGCCATAGTAAGTCACCAGCATATACCCCC...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATACAAGGCCCTTAAGGTaGTTAGAAAATTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDTRPLR*LENSSK
Trigger: TTTTGATGAATTTTCTAAGCACCTTAAGGGCCTTGT...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATTCACTGATGCATTCATaGCCAAAGATCGAGAAACAT +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHSLMHS*PKIEKH
Trigger: ATGTTTCTCGATCTTTGGGCATGAATGCATCAGTGA...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp AATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTATCTGTGCAGATCAGTaGATCCGACAGCCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: NLSRVTNLKPGFGNYILRICADQ*IRQPFV
Trigger: TACAAAGGGCTGTCGGATGCACTGATCTGCACAGAT...ACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCCGTTCCCTGTGATTTaGAACAAACTGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHPFPVI*NKLVRI
Trigger: AATTCTTACCAGTTTGTTGCAAATCACAGGGAACGG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAATCATCTTCAGTCTGGTaGTTTGGTTTCTCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: LQTKCWDADFWHIVEVGESSSVW*FGFSGG
Trigger: ACCACCTGAGAAACCAAAGCACCAGACTGAAGATGA...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAACCTTCTGATTTACTaGTTTTCATCTTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPNLLIY*FSSSLR
Trigger: CCTCAGGGAAGATGAAAAGCAGTAAATCAGAAGGTT...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATAACCTTCTGATTTACTaGTTTTCATCTTCCCTGAGG +
Preference number: 4 (lower is better)
Translates to: VGLVIALKLGLPIITSKHNLLIY*FSSSLR
Trigger: CCTCAGGGAAGATGAAAAGCAGTAAATCAGAAGGTT...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCCAGTTTGTTGTCCCCTaGAAGGTTATACAGATTAAC +
Preference number: 4 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGQFVVP*KVIQIN
Trigger: GTTAATCTGTATAACCTTCCAGGGGACAACAAACTG...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAGATACTGGGATTGGCTaGGGAAATTTCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPDTGIG*GNFKKK
Trigger: TTTCTTCTTGAAATTTCCCCAGCCAATCCCAGTATC...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAAAATGCTCTAGATACTaGGATTGGCTGGGGAAATTT +
Preference number: 4 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPKCSRY*DWLGKF
Trigger: AAATTTCCCCAGCCAATCCCAGTATCTAGAGCATTT...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGACACACTTCAAATTaGAGAAGCCCAGGAGAATCT +
Preference number: 4 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLGHTSN*RSPGES
Trigger: AGATTCTCCTGGGCTTCTCCAATTTGAAGTGTGTCC...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTGGGTGTCGGCTTGAATaGTTTCAGCTTTCCTCCGAA +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFGCRLE*FQLSSE
Trigger: TTCGGAGGAAAGCTGAAACCATTCAAGCCGACACCC...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp AATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTAGTGGTACCACTCATTaGGTTGTTGCCTGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: NLSRVTNLKPGFGNYILRSGTTH*VVACGH
Trigger: ATGACCACAGGCAACAACCCAATGAGTGGTACCACT...ACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGCGGAAAGGTGTTGGTTaGTGTAGTGGTACCACTCAT +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRRKGVG*CSGTTH
Trigger: ATGAGTGGTACCACTACACCAACCAACACCTTTCCG...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTAGTCTTCAGTTTGTTGTCCCCTGGAAGGTTATACAGATTAACAAGGCCCTTATTGTGGGTAAGTTGTTaGGGGAGTGCTACACTGGCT +
Preference number: 4 (lower is better)
Translates to: LVFSLLSPGRLYRLTRPLLWVSC*GSATLA
Trigger: AGCCAGTGTAGCACTCCCCCAACAACTTACCCACAA...TAAGGGCCTTGTTAATCTGTATAACCTTCCAGGGGACAACAAACTGAAGACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCAGTGAGGTACTGGTTGTaGGTAAGTTGTTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSVRYWL*VSCWGS
Trigger: ACTCCCCCAACAACTTACCCACAACCAGTACCTCAC...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTTCACTGTCCAGATTCTaGGGGGTATATGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFSLSRF*GVYAGD
Trigger: GTCACCAGCATATACCCCCCAGAATCTGGACAGTGA...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGTACCATCGTCTGAGCTaGGACTATTCTGATAAGATT +
Preference number: 4 (lower is better)
Translates to: SLQLTCVESCTSITTHTRYHRLS*DYSDKI
Trigger: AATCTTATCAGAATAGTCCCAGCTCAGACGATGGTA...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGTCATAGACAAGGACTaGTCTGAAGAGATGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLVIDKD*SEEMGD
Trigger: ATCACCCATCTCTTCAGACCAGTCCTTGTCTATGAC...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACTCACCCCTTATGGTaGTTTGCCTATAAACTTATC +
Preference number: 4 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPTHPLW*FAYKLI
Trigger: GATAAGTTTATAGGCAAACCACCATAAGGGGTGAGT...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCGGAGTGATTAAAGTTTaGACTCCTTCTCCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPGVIKV*TPSPCD
Trigger: ATCACAAGGAGAAGGAGTCCAAACTTTAATCACTCC...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CCATCGACAATTCAGGGGCTTATCCTTCATCCAGATCCTAACTCGGGATTCTTTTGGAATAATCAGGAATaGCACAGTGCAGGTGTCAAT +
Preference number: 4 (lower is better)
Translates to: PSTIQGLILHPDPNSGFFWNNQE*HSAGVN
Trigger: ATTGACACCTGCACTGTGCCATTCCTGATTATTCCA...AAAGAATCCCGAGTTAGGATCTGGATGAAGGATAAGCCCCTGAATTGTCGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATATACTGTATGACTCACTaGCTCCCTGAAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LASEMLSTSCPSKTNSRIYCMTH*LPERAS
Trigger: AGAAGCCCTTTCAGGGAGCCAGTGAGTCATACAGTA...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
3UTR CAA 72 bp AAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTaGGCAATTATATCCTGCGTTGTTTGTCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: KIFQESPTSSLV*AIISCVVCPHH
Trigger: GTGGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGTAAAGATGTTACTTTaGGAGCCTTCTGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSVKMLL*EPSAMS
Trigger: AGACATTGCAGAAGGCTCTCAAAGTAACATCTTTAC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTGCTGAAACGAGACTCTaGGAGAGGACACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSAETRL*ERTHFK
Trigger: TTTGAAGTGTGTCCTCTCTCAGAGTCTCGTTTCAGC...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCAGCTGAAACGAGACTCTaGGAGAGGACACACTTCAAA +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSAETRL*ERTHFK
Trigger: TTTGAAGTGTGTCCTCTCTCAGAGTCTCGTTTCAGC...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTGTAAGAATTGGGTTCTaGGACACCTTGCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFVRIGF*DTLLKS
Trigger: GGACTTCAGCAAGGTGTCTCAGAACCCAATTCTTAC...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTGTGGCTTTTGCTGCCTaGGGAAGACACAGAACCACT +
Preference number: 4 (lower is better)
Translates to: LRTSVALETVSWISIFLCVAFAA*GRHRTT
Trigger: AGTGGTTCTGTGTCTTCCTCAGGCAGCAAAAGCCAC...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTACTGTGGATACTGTATaGCTCACTGGCTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFTVDTV*LTGSLK
Trigger: TTTCAGGGAGCCAGTGAGTCATACAGTATCCACAGT...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATCTCCCCAGCTGCTCCTaGTGTACATTTTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDLPSCS*CTFLNS
Trigger: TGAGTTTAAAAATGTACATCAGGAGCAGCTGGGGAG...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGACTTTGAGAGCCTTCTaGAATGTCTCCAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRTLRAF*NVSKQL
Trigger: CAGCTGTTTGGAGACATTGCAGAAGGCTCTCAAAGT...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGACATGTGTTGAGTCCTaGACATCCATTACCACACAC +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRTCVES*TSITTH
Trigger: GTGTGTGGTAATGGATGTGCAGGACTCAACACATGT...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTTGGCCCACCGACTCATaGCGATCTTTGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLWPTDS*RSLMLM
Trigger: CATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCA...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp ATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGTCCGTTCCCTGTGATTTaGAACAAACTGGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: MSPRIQTQTYFSKKVQLGPFPVI*NKLVRI
Trigger: AATTCTTACCAGTTTGTTGCAAATCACAGGGAACGG...ACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATATTACATCTGGGCCAATaGTGTCTGAACTGGATAGTC +
Preference number: 4 (lower is better)
Translates to: LASEMLSTSCPSKTNSRILHLGQ*CLNWIV
Trigger: GACTATCCAGTTCAGACAGCATTGGCCCAGATGTAA...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGGCTTCCAGCAGCATCTaGAATAAGATCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMASSSI*NKISWI
Trigger: GATCCAGCTGATCTTATTGCAGATGCTGCTGGAAGC...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTCTTTCCCTCAGTGTCTaGCTTCTTCCGCTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRTSVALETVSWISIFLCLSLSV*LLPLWR
Trigger: CCTCCAAAGCGGAAGAAGGCAGACACTGAGGGAAAG...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATACTGAGAACTTCTGTTaGACTCGAAACAGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDTENFC*TRNSLL
Trigger: CAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAGT...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAATGTGATTCAAAGGTATaGGGTCAGGGTCCTTTGATA +
Preference number: 4 (lower is better)
Translates to: LQTKCWDADFWHIVEVGECDSKV*GQGPLI
Trigger: TATCAAAGGACCCTGACCCCATACCTTTGAATCACA...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAAATGAGGGACAGTGCTaGGGTGTCGGCTTGAATGGT +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIINEGQC*GVGLNG
Trigger: ACCATTCAAGCCGACACCCCAGCACTGTCCCTCATT...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTACACTGGCTTGGAGCTaGAGTGATGTGTGGCGTATC +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLTLAWS*SDVWRI
Trigger: GATACGCCACACATCACTCCAGCTCCAAGCCAGTGT...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGTGCAATAAGATCAGCTaGATCAGTGTATGGATTTTC +
Preference number: 4 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKCNKIS*ISVWIF
Trigger: GAAAATCCATACACTGATCCAGCTGATCTTATTGCA...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GTGTCCAAAATGACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACAGAAGAACTATGAGATaGAGACTTTCCCTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: VSKMTKVLHLPMTQTDNYRRTMR*RLSLSV
Trigger: GACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCT...GTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTCATTTTGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGACACAGAACCACTGCTaGTATACTGACTGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMTQNHC*YTDCER
Trigger: CCTCTCACAGTCAGTATACCAGCAGTGGTTCTGTGT...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TTAGTCTTCAGTTTGTTGTCCCCTGGAAGGTTATACAGATTAACAAGGCCCTTAACACAGAACCACTGCTaGTATACTGACTGTGAGAGG +
Preference number: 4 (lower is better)
Translates to: LVFSLLSPGRLYRLTRPLTQNHC*YTDCER
Trigger: CCTCTCACAGTCAGTATACCAGCAGTGGTTCTGTGT...TAAGGGCCTTGTTAATCTGTATAACCTTCCAGGGGACAACAAACTGAAGACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCGATGAATTTTTGGACTaGCTAGATCCAGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: LTNLLGLDATVLAQAISSDEFLD*LDPEDP
Trigger: GGGGTCTTCTGGATCTAGCCAGTCCAAAAATTCATC...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTGATGAATTTTTGGACTaGCTAGATCCAGAAGACCCC +
Preference number: 4 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLDEFLD*LDPEDP
Trigger: GGGGTCTTCTGGATCTAGCCAGTCCAAAAATTCATC...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTCTGAACTCCCGGAGGTaGAAACCTTTGATTTGTCTT +
Preference number: 4 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLLNSRR*KPLICL
Trigger: AAGACAAATCAAAGGTTTCCACCTCCGGGAGTTCAG...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGGGAACCACTGATGAGTaGAGAGCCATAGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKGTTDE*RAIVFR
Trigger: TCTAAAAACTATGGCTCTCCACTCATCAGTGGTTCC...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTGTGACTTACTATGGCTaGGAGAGCCACGCTCATGCT +
Preference number: 4 (lower is better)
Translates to: LRTSVALETVSWISIFLCVTYYG*ESHAHA
Trigger: AGCATGAGCGTGGCTCTCCCAGCCATAGTAAGTCAC...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GTGTCCAAAATGACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTGACTCACCCCTTATaGTGGTTTGCCTATAAACTT +
Preference number: 4 (lower is better)
Translates to: VSKMTKVLHLPMTQTDNYLTHPL*WFAYKL
Trigger: AAGTTTATAGGCAAACCACCATAAGGGGTGAGTCAG...GTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTCATTTTGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGCACCAACCTCAAGCCTaGTTTTGGCAATTATATCCT +
Preference number: 4 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKHQPQA*FWQLYP
Trigger: AGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp CTGAGTGATCAGTTCATACAGGGGTGCATAAGTTGGTaGAGTTTCAAACAATGGAATTCCTGTGCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LSDQFIQGCISW*SFKQWNSCAVL
Trigger: CAGAACTGCACAGGAATTCCATTGTTTGAAACTCAACCAACTTATGCACCCCTGTATGAACTGATCACTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTATAGCTCAAACTGAGTaGTCAGTTCATACAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFIAQTE*SVHTGV
Trigger: CACCCCTGTATGAACTGATCACTCAGTTTGAGCTAT...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGTTTGATAGCTCAAACTaGGTGATCAGTTCATACAGG +
Preference number: 4 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKFDSSN*VISSYR
Trigger: CCTGTATGAACTGATCACTCAGTTTGAGCTATCAAA...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGTCATTCACAGGGTGCTaGAAAGATACGCTGAAACGA +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMSFTGC*KDTLKR
Trigger: TCGTTTCAGCGTATCTTTTCAGCACCCTGTGAATGA...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTCTTCATGCCAGAGCTTaGACTAGTTCCAGACATATG +
Preference number: 4 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSLHARA*TSSRHM
Trigger: CATATGTCTGGAACTAGTTCAAGCTCTGGCATGAAG...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCCGTACAGGAATTAGATaGTGGGGGAGTTTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPRTGIR*WGSFLG
Trigger: TCCCAGAAAACTCCCCCATCATCTAATTCCTGTACG...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTCTGAAACTCTCCTCCTaGCATGTTATGTTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTILKLSS*HVMFGG
Trigger: TCCTCCAAACATAACATGTCAGGAGGAGAGTTTCAG...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATACTTAGAAGAATCCACTaGACTCCCGGAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIILRRIH*TPGGGN
Trigger: GTTTCCACCTCCGGGAGTTCAGTGGATTCTTCTAAG...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTCATCAGAGCAGGTTATaGCCAAGAACCCCTAATGTT +
Preference number: 4 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSHQSRL*PRTPNV
Trigger: AACATTAGGGGTTCTTGGTCATAACCTGCTCTGATG...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGTCCCAATCTAGCTTCTaGGATGTTAAGTACTTCCTG +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRSQSSF*DVKYFL
Trigger: CAGGAAGTACTTAACATCTCAGAAGCTAGATTGGGA...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATGGGACCAGCATTAGTTaGTTTCCAGTACATAATTGC +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDGTSIS*FPVHNC
Trigger: GCAATTATGTACTGGAAAGCAACTAATGCTGGTCCC...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAGTCTTCAACTGTCTCTaGAATGAGGGACAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIVFNCL*NEGQCW
Trigger: CCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGAC...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTTATTACTGGTGCCATTaGCTTCCTTTACCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSYYWCH*LPLPSF
Trigger: AAAAGAGGGTAAAGGAAGGCAATGGCACCAGTAATA...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCTCAGGAATGGCACAGTaGAGGTGTCAATATCAAAGT +
Preference number: 4 (lower is better)
Translates to: LTNLLGLDATVLAQAISSSGMAQ*RCQYQS
Trigger: ACTTTGATATTGACACCTGCACTGTGCCATTCCTGA...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATGAATGTCTGAGAGGCTaGTACTGTATCAACATCACA +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDECLRG*YCINIT
Trigger: TGTGATGTTGATACAGTAGCAGCCTCTCAGACATTC...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATTGGTTAAATTTTGCATaGAGCCGTTCCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDWLNFA*SRSRRE
Trigger: TTCTCTCCTGGAACGGCTCCATGCAAAATTTAACCA...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAATGACCCCCACTCCTTaGTGTGAGATAGCCAACACT +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIMTPTP*CEIANT
Trigger: AGTGTTGGCTATCTCACACCAAGGAGTGGGGGTCAT...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAATCTAGATACTGGGATTaGCTGGGGAAATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: LQTKCWDADFWHIVEVGESRYWD*LGKFQE
Trigger: TTCTTGAAATTTCCCCAGCCAATCCCAGTATCTAGA...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATCAGGGGTGCATAAGTTaGTTGAGTTTCAAACAATGG +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDQGCIS*LSFKQW
Trigger: CCATTGTTTGAAACTCAACCAACTTATGCACCCCTG...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp ATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGTTGCAATAAGATCAGCTaGATCAGTGTATGGATTTTC +
Preference number: 4 (lower is better)
Translates to: MSPRIQTQTYFSKKVQLGCNKIS*ISVWIF
Trigger: GAAAATCCATACACTGATCCAGCTGATCTTATTGCA...ACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCTCAACTGTGTCGGCTTaGTTATTGCCCTTAAACTTG +
Preference number: 4 (lower is better)
Translates to: LTNLLGLDATVLAQAISSSTVSA*LLPLNL
Trigger: CAAGTTTAAGGGCAATAACCAAGCCGACACAGTTGA...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGAGAGAGTACTATTACTaGTGCCATTGCCTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKREYYY*CHCLPL
Trigger: TAAAGGAAGGCAATGGCACCAGTAATAGTACTCTCT...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTAGAAGAACTATGAGATaGAGACTTTCCCTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLRRTMR*RLSLSV
Trigger: GACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCT...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTACCTGTACTGGTAGGTaGGGTAAAAGGTCTGTTAGA +
Preference number: 4 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSTCTGR*GKRSVR
Trigger: TCTAACAGACCTTTTACCCCACCTACCAGTACAGGT...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTTCTTCCTGCACTGCCTaGCGATTTAGATCCACCTGT +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLSSCTA*RFRSTC
Trigger: ACAGGTGGATCTAAATCGCCAGGCAGTGCAGGAAGA...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GTGTCCAAAATGACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACTACCATCGTCTGAGCTaGGACTATTCTGATAAGATT +
Preference number: 4 (lower is better)
Translates to: VSKMTKVLHLPMTQTDNYYHRLS*DYSDKI
Trigger: AATCTTATCAGAATAGTCCCAGCTCAGACGATGGTA...GTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTCATTTTGGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAATTTGGACCAACTCTCTaGCTTGATGCTATGAGATTT +
Preference number: 4 (lower is better)
Translates to: LQTKCWDADFWHIVEVGEFGPTL*LDAMRF
Trigger: AAATCTCATAGCATCAAGCCAGAGAGTTGGTCCAAA...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp AATAGGGTCTGGATATGCCTTTCTAATTCACCCAGCTaGATGTCAAAGCCATGCCATTTAGGATTCTTAACC +
Preference number: 4 (lower is better)
Translates to: NRVWICLSNSPS*MSKPCHLGFLT
Trigger: GGTTAAGAATCCTAAATGGCATGGCTTTGACATCAAGCTGGGTGAATTAGAAAGGCATATCCAGACCCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp GCCCATGACTCAAACGGACAACTACCTCAAACAAAGTaGAACAACCTTCATGCAAATGCATCAAGGAATGTA +
Preference number: 4 (lower is better)
Translates to: AHDSNGQLPQTK*NNLHANASRNV
Trigger: TACATTCCTTGATGCATTTGCATGAAGGTTGTTCAACTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp CACCATATAAGCCTTGCTCTTCGGCCTTCCATCATTTaGAACCCTAAACCTCATAGATTTAGAACGAAACAC +
Preference number: 4 (lower is better)
Translates to: HHISLALRPSII*NPKPHRFRTKH
Trigger: GTGTTTCGTTCTAAATCTATGAGGTTTAGGGTTCAAAATGATGGAAGGCCGAAGAGCAAGGCTTATATGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp GACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGTaGCTACATAGTAGCAAGGGTTTATCTTCATGCTCA +
Preference number: 4 (lower is better)
Translates to: DSDLFLQKGPIG*LHSSKGLSSCS
Trigger: TGAGCATGAAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATaGTCACTGATGCATTCATGCCCAAAGATCGAGAAA +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQ*SLMHSCPKIEK
Trigger: TTTCTCGATCTTTGGGCATGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 72 bp GGATGTGACCCCATAATTAATGGTGCAATTGGGAGTTaGTACACAGCAGATGTTCCTTCAATTGTCACTGAT +
Preference number: 4 (lower is better)
Translates to: GCDPIINGAIGS*YTADVPSIVTD
Trigger: ATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTGCACCATTAATTATGGGGTCACATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
3UTR CAA 72 bp GAAATAATACTGAAATCAACTGTGTCGGCTTGGTTATaGCCCTTAAACTTGGTCTCCCCATTATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: EIILKSTVSAWL*PLNLVSPLSPP
Trigger: TGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGACACAGTTGATTTCAGTATTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACATCCTTCAATTGTCACTaGTGCATTCATGCCCAAAGA +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETSFNCH*CIHAQR
Trigger: TCTTTGGGCATGAATGCATCAGTGACAATTGAAGGA...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGATGGACATACATCTTTaGACAACTTTGGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLMDIHL*TTLAMK
Trigger: CTTCATTGCCAAAGTTGTTCAAAGATGTATGTCCAT...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTGAGATGCAAATCCTTTaGAATCATCATTATCCCCAC +
Preference number: 4 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLEMQIL*NHHYPH
Trigger: GTGGGGATAATGATGATTTCAAAGGATTTGCATCTC...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR TCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTGATGATGGCTTTCCTTaGGGTTTCATCTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLDDGFP*GFILVL
Trigger: CAGCACCAAGATGAAACCTCAAGGAAAGCCATCATC...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACAGAGCATACAGTGGAGTaGTTAAAGTTTGGACTCCTT +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETEHTVE*LKFGLL
Trigger: AAGGAGTCCAAACTTTAATCACTCCACTGTATGCTC...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGAAGTGGCAGAGTTGTTaGGAGCTGATGACAATAAAA +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRKWQSC*ELMTIK
Trigger: TTTTATTGTCATCAGCTCTCAACAACTCTGCCACTT...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGTTTGAAACAGAAGAATaGGTACACCTAGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMFETEE*VHLDRR
Trigger: CCTCCTGTCTAGGTGTACTCATTCTTCTGTTTCAAA...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCACAATGGAATTCCTGTaGAGTTCTGCAGTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LTNLLGLDATVLAQAISSTMEFL*SSAVSE
Trigger: TTCAGAAACTGCAGAACTGCACAGGAATTCCATTGT...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTATCCCCACTTTGGCTaGTTTCATCAAAATATTCTT +
Preference number: 4 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSYPHFG*FHQNIL
Trigger: AAGAATATTTTGATGAAAGCAGCCAAAGTGGGGATA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp AATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTGGGGAGCCTCCATCATaGTTACTGATGATAATTTTT +
Preference number: 4 (lower is better)
Translates to: NLSRVTNLKPGFGNYILRGEPPS*LLMIIF
Trigger: AAAAATTATCATCAGTAAGCATGATGGAGGCTCCCC...ACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAATTGACTTCATGTCCTTaGCTTCTTTTGAAACAGAAG +
Preference number: 4 (lower is better)
Translates to: LQTKCWDADFWHIVEVGELTSCP*LLLKQK
Trigger: CTTCTGTTTCAAAAGAAGGCAAGGACATGAAGTCAA...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATATGTTAAGTACTTCCTaGCCCTCCAAAACTAACTCA +
Preference number: 4 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDMLSTS*PSKTNS
Trigger: TGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACAT...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATACTCCAGGGTCTATTTTaGTTAAATTTTGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: LASEMLSTSCPSKTNSRILQGLF*LNFAWS
Trigger: GCTCCATGCAAAATTTAACCAAAATAGACCCTGGAG...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACACATTCTGTCTTGCTATaGACTCCAAACGATCAGTCA +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETHSVLL*TPNDQS
Trigger: TGACTGATCGTTTGGAGTCCATAGCAAGACAGAATG...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTGATACTGGGATTGGCTaGGGAAATTTCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLDTGIG*GNFKKK
Trigger: TTTCTTCTTGAAATTTCCCCAGCCAATCCCAGTATC...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCACAAACTGGTAAGAATTaGGTTCTGAGACACCTTGCT +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSQTGKN*VLRHLA
Trigger: AGCAAGGTGTCTCAGAACCCAATTCTTACCAGTTTG...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTTGGAGGACATAGGATaGCTGGAAGAATTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPLEDIG*LEEFVL
Trigger: GAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCCAAGATAAAGCACTCTaGTATCACCTGCCCATATCC +
Preference number: 4 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPQDKAL*YHLPIS
Trigger: GGATATGGGCAGGTGATACCAGAGTGCTTTATCTTG...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTCACCAACCTCAAGCCTaGTTTTGGCAATTATATCCT +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFHQPQA*FWQLYP
Trigger: AGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTCTAGTTCCAGACATATaGGAACCACCAGAACCTGAA +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLLVPDI*EPPEPE
Trigger: TTCAGGTTCTGGTGGTTCTCATATGTCTGGAACTAG...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATACTCCCCAGCTGCTCCTaGTGTACATTTTTAAACTCA +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIILPSCS*CTFLNS
Trigger: TGAGTTTAAAAATGTACATCAGGAGCAGCTGGGGAG...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAAACAAGGCCCTTAAGGTaGTTAGAAAATTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: LQTKCWDADFWHIVEVGETRPLR*LENSSK
Trigger: TTTTGATGAATTTTCTAAGCACCTTAAGGGCCTTGT...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTTTTCTTGGTCTTGTTaGTCCCCGAGCATATTTCCA +
Preference number: 4 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPFSWSC*SPSIFP
Trigger: TGGAAATATGCTCGGGGAGCAACAAGACCAAGAAAA...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAACTGATGATAATTTTTaGCACACCTGTGCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIITDDNF*HTCAPH
Trigger: GTGGGGAGCACAGGTGTGGCAAAAATTATCATCAGT...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp TTAGTCTTCAGTTTGTTGTCCCCTGGAAGGTTATACAGATTAACAAGGCCCTTAGGGGAGCCTCCATCATaGTTACTGATGATAATTTTT +
Preference number: 4 (lower is better)
Translates to: LVFSLLSPGRLYRLTRPLGEPPS*LLMIIF
Trigger: AAAAATTATCATCAGTAAGCATGATGGAGGCTCCCC...TAAGGGCCTTGTTAATCTGTATAACCTTCCAGGGGACAACAAACTGAAGACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR GCA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTAACAAAATGCTGGGATaGAGACTTTTGGCACATTGT +
Preference number: 4 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTINKMLG*RLLAHC
Trigger: ACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTAAGGGTTTATCTTCATaGTCACCTAGCATTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LRTSVALETVSWISIFLCKGLSS*SPSIPG
Trigger: GCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTT...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACACTCCAGGGTCTATTTTaGTTAAATTTTGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: RIFERTLQILRTSVALETLQGLF*LNFAWS
Trigger: GCTCCATGCAAAATTTAACCAAAATAGACCCTGGAG...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTGATACTGGGATTGGCTaGGGAAATTTCAAGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSDTGIG*GNFKKK
Trigger: TTTCTTCTTGAAATTTCCCCAGCCAATCCCAGTATC...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCATCTAGATACTGGGATTaGCTGGGGAAATTTCAAGAA +
Preference number: 4 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSSRYWD*LGKFQE
Trigger: TTCTTGAAATTTCCCCAGCCAATCCCAGTATCTAGA...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CCA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTAGGGTTGAGAAATCCTaGGCAGGATTATCTTTAAGA +
Preference number: 4 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSRVEKS*AGLSLR
Trigger: TCTTAAAGATAATCCTGCCCAGGATTTCTCAACCCT...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGTACTGCTACTTAACTTaGAACTTGATGAACCTTCTG +
Preference number: 4 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRYCYLT*NLMNLL
Trigger: CAGAAGGTTCATCAAGTTCCAAGTTAAGTAGCAGTA...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGTACATCTTATTACCTTaGGACACAAAAGTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMYILLP*DTKVAE
Trigger: CTCTGCCACTTTTGTGTCCCAAGGTAATAAGATGTA...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp ATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATaGGGTTGCTACATAGTAGCAAGGGTTTATCTTCAT +
Preference number: 4 (lower is better)
Translates to: IQTQTYFSKKVQ*GCYIVARVYLH
Trigger: ATGAAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTATGGACATACATCTTTaGACAACTTTGGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFMDIHL*TTLAMK
Trigger: CTTCATTGCCAAAGTTGTTCAAAGATGTATGTCCAT...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTAAGATAGGTAGAAGTTaGCTTCATGTCCTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLKIGRS*LHVLAF
Trigger: GAAGGCAAGGACATGAAGTCAACTTCTACCTATCTT...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAGGAATCAGGTCAAACTaGGAATACATAAGACACCAG +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIGIRSN*EYIRHQ
Trigger: CTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCC...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCTATCCCCACTTTGGCTaGTTTCATCAAAATATTCTT +
Preference number: 4 (lower is better)
Translates to: LTNLLGLDATVLAQAISSYPHFG*FHQNIL
Trigger: AAGAATATTTTGATGAAAGCAGCCAAAGTGGGGATA...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGTTGATGTCAAAGCCATaGCATTTAGGATTCTTAACC +
Preference number: 4 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMLMSKP*HLGFLT
Trigger: GGTTAAGAATCCTAAATGGCATGGCTTTGACATCAA...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTTGCCTTCTTCCGCTTTaGAGGCTTATCTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLCLLPL*RLIFAF
Trigger: AAAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCA...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp ATCTTATTACCTTGGGACACAAAAGTGGCAGAGTTGTaGAGAGCTGATGACAATAAAAAGGAGAACACTAGA +
Preference number: 4 (lower is better)
Translates to: ILLPWDTKVAEL*RADDNKKENTR
Trigger: TCTAGTGTTCTCCTTTTTATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGTGTCCCAAGGTAATAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp TACATCTTATTACCTTGGGACACAAAAGTGGCAGAGTaGTTGAGAGCTGATGACAATAAAAAGGAGAACACT +
Preference number: 4 (lower is better)
Translates to: YILLPWDTKVAE*LRADDNKKENT
Trigger: AGTGTTCTCCTTTTTATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGTGTCCCAAGGTAATAAGATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAGTAAAGATGTTACTTTaGGAGCCTTCTGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIVKMLL*EPSAMS
Trigger: AGACATTGCAGAAGGCTCTCAAAGTAACATCTTTAC...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR TCA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTGTTCCCTTAGGAATCTaGATAGTGATTTTGGGAATG +
Preference number: 4 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLVPLGI*IVILGM
Trigger: CATTCCCAAAATCACTATTCAGATTCCTAAGGGAAC...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTACCTCAAACAAAGTTaGACAACCTTCATGCAAATG +
Preference number: 4 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPYLKQS*TTFMQM
Trigger: CATTTGCATGAAGGTTGTTCAACTTTGTTTGAGGTA...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR TCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATACTGCACTTAATTTTCTaGTCTAGGCCTGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIILHLIF*SRPEER
Trigger: TCTTTCTTCAGGCCTAGATCAGAAAATTAAGTGCAG...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR GCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATATTACTGGTGCCATTaGCTTCCTTTACCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIYYWCH*LPLPSF
Trigger: AAAAGAGGGTAAAGGAAGGCAATGGCACCAGTAATA...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTTCATCGTCACAGGGATaGACATACATCTTTGAACAA +
Preference number: 4 (lower is better)
Translates to: LRTSVALETVSWISIFLCSSSQG*TYIFEQ
Trigger: TTGTTCAAAGATGTATGTCCATCCCTGTGACGATGA...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAAAACCACTTTGGCTCTaGCTGTTCAATAAATCAGGA +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIKPLWL*LFNKSG
Trigger: TCCTGATTTATTGAACAGCCAGAGCCAAAGTGGTTT...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
3UTR CAA 72 bp TTGAACAACCTTCATGCAAATGCATCAAGGAATGTATaGCTTTTTCATTTTCTGCCCAGCCCTTCATATACA +
Preference number: 4 (lower is better)
Translates to: LNNLHANASRNV*LFHFLPSPSYT
Trigger: TGTATATGAAGGGCTGGGCAGAAAATGAAAAAGCAATACATTCCTTGATGCATTTGCATGAAGGTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR GCA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAACAAGGCCCTTAAGGTaGTTAGAAAATTCATCAAAA +
Preference number: 4 (lower is better)
Translates to: RKKIFQESPTSSLVLAIITRPLR*LENSSK
Trigger: TTTTGATGAATTTTCTAAGCACCTTAAGGGCCTTGT...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS TCA 90 bp ACGCAGGGCACCAGCAGTCCCTACTCTTCCCGGGAAGGATCAATCTaGAGTCCCCGGCGGCAAGAAGAGAAGGGTGCTCGAGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: TQGTSSPYSSREGSI*SPRRQEEKGARGRR
Trigger: GCGGCGGCCTCGAGCACCCTTCTCTTCTTGCCGCCGGGGACTTCAGATTGATCCTTCCCGGGAAGAGTAGGGACTGCTGGTGCCCTGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS-3UTR CAA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTCCTTTGAATACTGGGTaGGGGGTGAGGTACTGGTTG +
Preference number: 5 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSPLNTG*GVRYWL
Trigger: CAACCAGTACCTCACCCCCAACCCAGTATTCAAAGG...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTATATCCTGCGTTGTTaGTCCCCACCACCCCACCCC +
Preference number: 5 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGYILRC*SPPPHP
Trigger: GGGGTGGGGTGGTGGGGACAAACAACGCAGGATATA...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS CCA 90 bp CACAAAAGGATAAGCCCTTCCCCACCACTAACGGAGGAAACAAGTTaGCTCGGGATCCCGGGACGCAGGGCACCAGCAGTCCCTACTCTT +
Preference number: 5 (lower is better)
Translates to: HKRISPSPPLTEETS*LGIPGRRAPAVPTL
Trigger: AAGAGTAGGGACTGCTGGTGCCCTGCGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGTTAGTGGTGGGGAAGGGCTTATCCTTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS-3UTR CAA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAACGGAGGAAACAAGTaGGCTCGGGATCCCGGGACG +
Preference number: 5 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFNGGNK*ARDPGT
Trigger: CGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGTT...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGAACGGAGGAAACAAGTaGGCTCGGGATCCCGGGACG +
Preference number: 5 (lower is better)
Translates to: FLVLLLPEHISMRGEPEENGGNK*ARDPGT
Trigger: CGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGTT...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGGTTGTGGGTAAGTTGTaGGGGGAGTGCTACACTGGC +
Preference number: 5 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSVVGKL*GECYTG
Trigger: GCCAGTGTAGCACTCCCCCAACAACTTACCCACAAC...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTATGGGAGATGCAGTCTaGTCATCCAGTAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSMGDAV*SSSRSE
Trigger: TTCTGACCTACTGGATGACAAGACTGCATCTCCCAT...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGAGCATCGGGTGGTTCTaGGTGTTGCCGGCCATCGAA +
Preference number: 5 (lower is better)
Translates to: FLVLLLPEHISMRGEPEESIGWF*VLPAIE
Trigger: TTCGATGGCCGGCAACACCAAGAACCACCCGATGCT...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGGAGGTGTCCCAGGCTaGGTTTATTCTGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPIGGVPG*VYSASS
Trigger: AGAAGAGGCAGAATAAACCAAGCCTGGGACACCTCC...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCGGAAGATCAACACTGTaGGCACTGGTGATTGAGGAG +
Preference number: 5 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGGRSTL*ALVIEE
Trigger: CTCCTCAATCACCAGTGCCAACAGTGTTGATCTTCC...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTGGGTGGTTCTTGGTGTaGCCGGCCATCGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSAGWFLV*PAIEET
Trigger: TGTCTCTTCGATGGCCGGCAACACCAAGAACCACCC...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp TTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTGGGGTGAGGTACTGGTaGTGGGTAAGTTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: FTMSSTVSAMRDSAGVSAGVRYW*WVSCWG
Trigger: CCCCCAACAACTTACCCACAACCAGTACCTCACCCC...AGCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCATTGGAGAGGCAAGCTaGTCAGAGCCTCCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: MEEFQEQASLERQACQSLIGEAS*SEPPGG
Trigger: GCCACCTGGAGGCTCTGACAAGCTTGCCTCTCCAAT...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGCAATTATATCCTGCGTaGTTTGTCCCCACCACCCCA +
Preference number: 5 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKQLYPA*FVPTTP
Trigger: TGGGGTGGTGGGGACAAACAACGCAGGATATAATTG...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp AATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCAACGGAGGAAACAAGTaGGCTCGGGATCCCGGGACG +
Preference number: 5 (lower is better)
Translates to: NVDALQNSSQPSSPCWSANGGNK*ARDPGT
Trigger: CGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGTT...GGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR CAA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGGGTGCAATTGGGAGTTaGTACACAGCAGATGTTCCT +
Preference number: 5 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSGAIGS*YTADVP
Trigger: AGGAACATCTGCTGTGTACAAACTCCCAATTGCACC...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCTGCTGGGGTGTCGGCTaGAATGGTTTCAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSCWGVG*NGFSFP
Trigger: AGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCA...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCGATGACTTCTTTTTCTaGGTCTTGTTGCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: EKCSAPWFSGRVKQFSPGDDFFF*VLLLPE
Trigger: CTCGGGGAGCAACAAGACCAAGAAAAAGAAGTCATC...GCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACACTGGTTGTGGGTAAGTaGTTGGGGGAGTGCTACACT +
Preference number: 5 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTLVVGK*LGECYT
Trigger: AGTGTAGCACTCCCCCAACAACTTACCCACAACCAG...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTATCAACTGTGTCGGCTaGGTTATTGCCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSINCVG*VIALKL
Trigger: AAGTTTAAGGGCAATAACCAAGCCGACACAGTTGAT...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTCTATTACTGGTGCCATaGCCTTCCTTTACCCTCTTT +
Preference number: 5 (lower is better)
Translates to: VVACGHAIPWAASRGQVLLLLVP*PSFTLF
Trigger: AAAGAGGGTAAAGGAAGGCAATGGCACCAGTAATAG...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGCTGCGCTTCCCTGGTTaGCTGTCTAATCCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: SLQLTCVESCTSITTHTRLRFPG*LSNPGP
Trigger: GGGGCCCGGATTAGACAGCAAACCAGGGAAGCGCAG...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTGACTGGGATGAATTTTaGGACTGGCTAGATCCAGAA +
Preference number: 5 (lower is better)
Translates to: VVACGHAIPWAASRGQVLDWDEF*DWLDPE
Trigger: TTCTGGATCTAGCCAGTCCAAAAATTCATCCCAGTC...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCTTTAGAAGAAGCCATTaGAGGCCTAAGCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: RLPVKQVQMLGQCGGEPIFRRSH*RPKPFS
Trigger: GGAGAAGGGCTTAGGCCTCAAATGGCTTCTTCTAAA...GATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GTTGTTGCCTGTGGTCATGCCATACCCTGGGCTGCTAGCCGGGGGCAGGTTCTTTTAGTCTTCAGTTTGTaGTCCCCTGGAAGGTTATAC +
Preference number: 5 (lower is better)
Translates to: VVACGHAIPWAASRGQVLLVFSL*SPGRLY
Trigger: GTATAACCTTCCAGGGGACAACAAACTGAAGACTAA...AAGAACCTGCCCCCGGCTAGCAGCCCAGGGTATGGCATGACCACAGGCAACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTGGAAGATCAACACTGTaGGCACTGGTGATTGAGGAG +
Preference number: 5 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFGRSTL*ALVIEE
Trigger: CTCCTCAATCACCAGTGCCAACAGTGTTGATCTTCC...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGGGAAGATCAACACTGTaGGCACTGGTGATTGAGGAG +
Preference number: 5 (lower is better)
Translates to: FLVLLLPEHISMRGEPEEGRSTL*ALVIEE
Trigger: CTCCTCAATCACCAGTGCCAACAGTGTTGATCTTCC...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGGTGTCAGCTGTCATGTaGACATCAAAGATAGGGTTC +
Preference number: 5 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSVSAVM*TSKIGF
Trigger: GAACCCTATCTTTGATGTCAACATGACAGCTGACAC...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCGAGAATGCCCAGAGCTaGAAGAATCTCGAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGENAQS*KNLEEG
Trigger: CCCCTCTTCGAGATTCTTCAAGCTCTGGGCATTCTC...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTAGCCTCCAGGTGGCCTaGAATGAGAAGGGGATATGT +
Preference number: 5 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSSLQVA*NEKGIC
Trigger: ACATATCCCCTTCTCATTCAAGGCCACCTGGAGGCT...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CCGTCCAGTGGGTCTTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTCGGAGGTGGAAACCTTaGATTTGTCTTTATCACTTT +
Preference number: 5 (lower is better)
Translates to: PSSGSSPPGPLVTTPCFSRRWKP*ICLYHF
Trigger: AAAGTGATAAAGACAAATCAAAGGTTTCCACCTCCG...ACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAAGACCCACTGGACGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTCTGGGATGCAGACTTTaGGCACATTGTGGAAGTAGG +
Preference number: 5 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFLGCRL*AHCGSR
Trigger: CCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAG...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCACAGCTGACCAAATGTaGATGCCCTCCAGAACTCAT +
Preference number: 5 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSTADQM*MPSRTH
Trigger: ATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTGT...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGCAGATGTTCCTTCAATaGTCACTGATGCATTCATGC +
Preference number: 5 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKQMFLQ*SLMHSC
Trigger: GCATGAATGCATCAGTGACAATTGAAGGAACATCTG...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGCAGATGTTCCTTCAATaGTCACTGATGCATTCATGC +
Preference number: 5 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSQMFLQ*SLMHSC
Trigger: GCATGAATGCATCAGTGACAATTGAAGGAACATCTG...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCCTCGAAGGGGTCCATTTATaGTCAACTGGATGTGACCCC +
Preference number: 5 (lower is better)
Translates to: MEEFQEQASLERQACQSLEGVHL*STGCDP
Trigger: GGGGTCACATCCAGTTGACAATAAATGGACCCCTTC...GAGGCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGAGGACACACTTCAAATaGGAGAAGCCCAGGAGAATC +
Preference number: 5 (lower is better)
Translates to: FLVLLLPEHISMRGEPEERTHFK*EKPRRI
Trigger: GATTCTCCTGGGCTTCTCCAATTTGAAGTGTGTCCT...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCAGCATCGGGTGGTTCTaGGTGTTGCCGGCCATCGAA +
Preference number: 5 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPSIGWF*VLPAIE
Trigger: TTCGATGGCCGGCAACACCAAGAACCACCCGATGCT...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTGGAGGACATAGGATGGCTGGAAGAATTTGTGCTCACCCCCATCTGGCCGTCCGATGACTTCTTTTTCTaGGTCTTGTTGCTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: LEDIGWLEEFVLTPIWPSDDFFF*VLLLPE
Trigger: CTCGGGGAGCAACAAGACCAAGAAAAAGAAGTCATC...GGACGGCCAGATGGGGGTGAGCACAAATTCTTCCAGCCATCCTATGTCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTGCGCTTCCCTGGTTaGCTGTCTAATCCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: LQTKCWDADFWHIVEVGELRFPG*LSNPGP
Trigger: GGGGCCCGGATTAGACAGCAAACCAGGGAAGCGCAG...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATCAGGAACAGGCTTCATaGGAGAGGCAAGCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDQEQAS*ERQACQ
Trigger: CTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTG...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAACCAAAGTCCTTCATTaGCCCATGACTCAAACGGAC +
Preference number: 5 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTTKVLH*PMTQTD
Trigger: GTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGT...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCACAACCCTCTTCTCCTaGTTGGTCAGCCTGGTCTCG +
Preference number: 5 (lower is better)
Translates to: NVDALQNSSQPSSPCWSATTLFS*LVSLVS
Trigger: CGAGACCAGGCTGACCAACAAGGAGAAGAGGGTTGT...GGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR CAA 90 bp GGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACTCCAGGGTCTATTTaGGTTAAATTTTGCATGGAG +
Preference number: 5 (lower is better)
Translates to: GSLLSKFRCWVSVGVSPSTPGSI*VKFCME
Trigger: CTCCATGCAAAATTTAACCAAAATAGACCCTGGAGT...CGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TTCACCCCCAGGGCCACTGGTGACAACCCCATGCTTCAGTTTATCTATGACAGCCTGCCTTCTTCCGCTTaGGAGGCTTATCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: FTPRATGDNPMLQFIYDSLPSSA*EAYLCF
Trigger: AAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCAG...GCTGTCATAGATAAACTGAAGCATGGGGTTGTCACCAGTGGCCCTGGGGGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCTGCTCAGTCCATGCTaGGTTATGGGAGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: VGLVIALKLGLPIITSKHLLSPC*VMGEEP
Trigger: AGGCTCCTCTCCCATAACCAAGCATGGACTGAGCAG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CCCTGGTTCTCAGGCAGGGTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTGTCACCCAAGACATTaGACTCTGATGTGGTTAATT +
Preference number: 5 (lower is better)
Translates to: PWFSGRVKQFSPGSLLSKCHPRH*TLMWLI
Trigger: AATTAACCACATCAGAGTCAAATGTCTTGGGTGACA...CTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCACCCTGCCTGAGAACCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTCCCAGTTTACTCATTTaGGTATTTGTTGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFPSLLI*VFVGPA
Trigger: TGCAGGGCCAACAAATACCAAAATGAGTAAACTGGG...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACAACCTCAAGCCTGGTTTaGGCAATTATATCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTTSSLV*AIISCV
Trigger: AACGCAGGATATAATTGCCAAAACCAGGCTTGAGGT...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATAAACGGAGGAAACAAGTaGGCTCGGGATCCCGGGACG +
Preference number: 5 (lower is better)
Translates to: LASEMLSTSCPSKTNSRINGGNK*ARDPGT
Trigger: CGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGTT...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGGGTGCAATTGGGAGTTaGTACACAGCAGATGTTCCT +
Preference number: 5 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGGAIGS*YTADVP
Trigger: AGGAACATCTGCTGTGTACAAACTCCCAATTGCACC...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCATGCTGGGGTGTCGGCTaGAATGGTTTCAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPCWGVG*NGFSFP
Trigger: AGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCA...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGCCACTCATTGGGTTGTaGCCTGTGGTCATGCCATAC +
Preference number: 5 (lower is better)
Translates to: SLQLTCVESCTSITTHTRPLIGL*PVVMPY
Trigger: GTATGGCATGACCACAGGCAACAACCCAATGAGTGG...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGGGGTGGTTCTTGGTGTaGCCGGCCATCGAAGAGACA +
Preference number: 5 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKGWFLV*PAIEET
Trigger: TGTCTCTTCGATGGCCGGCAACACCAAGAACCACCC...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTTTTCTTGGTCTTGTaGCTCCCCGAGCATATTTCC +
Preference number: 5 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGFFLVL*LPEHIS
Trigger: GGAAATATGCTCGGGGAGCAACAAGACCAAGAAAAA...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGCTGGTTGTGGGTAAGTaGTTGGGGGAGTGCTACACT +
Preference number: 5 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKLVVGK*LGECYT
Trigger: AGTGTAGCACTCCCCCAACAACTTACCCACAACCAG...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GTGAAGCAGTTTAGCCCCGGCTCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGCAGGAGCTAAAGCTTaGCCGGCTACTGAAATAATA +
Preference number: 5 (lower is better)
Translates to: VKQFSPGSLLSKFRCWVSAGAKA*PATEII
Trigger: TATTATTTCAGTAGCCGGCAAAGCTTTAGCTCCTGC...ACTGACCCAGCATCTGAACTTGCTTAACAGGGAGCCGGGGCTAAACTGCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GTCGGCTTGAATGGTTTCAGCTTTCCTCCGAATAGCCCTCATCGTCACAGGGATGTCAAGGACGGCTTCTaGTTTCTGCTGGGAGATTTT +
Preference number: 5 (lower is better)
Translates to: VGLNGFSFPPNSPHRHRDVKDGF*FLLGDF
Trigger: AAAATCTCCCAGCAGAAACAAGAAGCCGTCCTTGAC...ATCCCTGTGACGATGAGGGCTATTCGGAGGAAAGCTGAAACCATTCAAGCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTCTGCAAAGTCACTTaGGCTTTAATGCTAGGGGAG +
Preference number: 5 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGFCKVT*ALMLGE
Trigger: CTCCCCTAGCATTAAAGCCAAAGTGACTTTGCAGAA...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCCACTCGAAGAGATGGGTGATTaGGACCAACTCTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: GAEPMILFSTFPLRFSPLEEMGD*DQLSGL
Trigger: CAAGCCAGAGAGTTGGTCCAAATCACCCATCTCTTC...GAGTGGGGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTGGAGGTGTCCCAGGCTaGGTTTATTCTGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: FWYLLALHGGAEPMILFSGGVPG*VYSASS
Trigger: AGAAGAGGCAGAATAAACCAAGCCTGGGACACCTCC...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCACAGCTGACCAAATGTaGATGCCCTCCAGAACTCAT +
Preference number: 5 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTTADQM*MPSRTH
Trigger: ATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTGT...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ATGTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTACAGCTGACCAAATGTaGATGCCCTCCAGAACTCAT +
Preference number: 5 (lower is better)
Translates to: MLMPSRTHHNPLLLVGQPTADQM*MPSRTH
Trigger: ATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTGT...AGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR CAA 90 bp TTCTTGGTCTTGTTGCTCCCCGAGCATATTTCCATGCGGGGTGAGCCGGAAGAGCCAAACGATCAGTCATaGCTGGTAAAGATGTTACTT +
Preference number: 5 (lower is better)
Translates to: FLVLLLPEHISMRGEPEEPNDQS*LVKMLL
Trigger: AAGTAACATCTTTACCAGCAATGACTGATCGTTTGG...CTCTTCCGGCTCACCCCGCATGGAAATATGCTCGGGGAGCAACAAGACCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCAGGACACACTTCAAATaGGAGAAGCCCAGGAGAATC +
Preference number: 5 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTRTHFK*EKPRRI
Trigger: GATTCTCCTGGGCTTCTCCAATTTGAAGTGTGTCCT...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGTACCACTCATTGGGTaGTTGCCTGTGGTCATGCCA +
Preference number: 5 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSVPLIG*LPVVMP
Trigger: TGGCATGACCACAGGCAACAACCCAATGAGTGGTAC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp AGGATGGAGGAGTTCCAGGAACAGGCTTCATTGGAGAGGCAAGCTTGTCAGAGCGACTCATGCCGATCTTaGATGCTCATGCTCATATTA +
Preference number: 5 (lower is better)
Translates to: RMEEFQEQASLERQACQSDSCRS*MLMLIL
Trigger: TAATATGAGCATGAGCATCAAAGATCGGCATGAGTC...GCTCTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTGGAACTCCTCCATCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCCACTCCTTCAGTCTGGTGCTTaGGTTTCTCAGGTGGTAATC +
Preference number: 5 (lower is better)
Translates to: GAEPMILFSTFPLRFSPLLQSGA*VSQVVI
Trigger: GATTACCACCTGAGAAACCAAAGCACCAGACTGAAG...GAGTGGGGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GATTTCTCTGCTATGGAGGAGCCTGACTCACTTTCACTGTCCAGATTCTGGGGGGTGTCAGCTGTCATGTaGACATCAAAGATAGGGTTC +
Preference number: 5 (lower is better)
Translates to: DFSAMEEPDSLSLSRFWGVSAVM*TSKIGF
Trigger: GAACCCTATCTTTGATGTCAACATGACAGCTGACAC...CCCCCAGAATCTGGACAGTGAAAGTGAGTCAGGCTCCTCCATAGCAGAGAAATC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCGGGGTGAGGTACTGGTaGTGGGTAAGTTGTTGGGGG +
Preference number: 5 (lower is better)
Translates to: LTNLLGLDATVLAQAISSGVRYW*WVSCWG
Trigger: CCCCCAACAACTTACCCACAACCAGTACCTCACCCC...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGTATCACCTCCAAGCATaGGCACCCCCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWYHLQA*APPKYL
Trigger: TAAATACTTTGGGGGTGCCAATGCTTGGAGGTGATA...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCTTATTGCCCTTAAACTaGGTCTCCCCATTATCACCT +
Preference number: 5 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGLLPLN*VSPLSP
Trigger: AGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAA...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGGTGTCGGCTTGGTTATaGCCCTTAAACTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKVSAWL*PLNLVS
Trigger: GGAGACCAAGTTTAAGGGCAATAACCAAGCCGACAC...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGCTATTACTGGTGCCATaGCCTTCCTTTACCCTCTTT +
Preference number: 5 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWLLLVP*PSFTLF
Trigger: AAAGAGGGTAAAGGAAGGCAATGGCACCAGTAATAG...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGGACTGGGATGAATTTTaGGACTGGCTAGATCCAGAA +
Preference number: 5 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWDWDEF*DWLDPE
Trigger: TTCTGGATCTAGCCAGTCCAAAAATTCATCCCAGTC...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCAGCCTCCAGGTGGCCTaGAATGAGAAGGGGATATGT +
Preference number: 5 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSSLQVA*NEKGIC
Trigger: ACATATCCCCTTCTCATTCAAGGCCACCTGGAGGCT...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCGTCAAGGACGGCTTCTaGTTTCTGCTGGGAGATTTT +
Preference number: 5 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTVKDGF*FLLGDF
Trigger: AAAATCTCCCAGCAGAAACAAGAAGCCGTCCTTGAC...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCCCTGACATGTTATGTTaGGAGGACATAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSPDMLC*EDIGWL
Trigger: CAGCCATCCTATGTCCTCCAAACATAACATGTCAGG...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACCCTGACATGTTATGTTaGGAGGACATAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNPDMLC*EDIGWL
Trigger: CAGCCATCCTATGTCCTCCAAACATAACATGTCAGG...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCCGGGCTCTGACTAATTaGCTTGGGCTTGATGCTACA +
Preference number: 5 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPRALTN*LGLDAT
Trigger: TGTAGCATCAAGCCCAAGCAAATTAGTCAGAGCCCG...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GTTGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCTTGTTGGTCAGCCTGGTCTGCAAAACATGACTaGACGCACAAGCTTAATGGT +
Preference number: 5 (lower is better)
Translates to: VDALQNSSQPSSPCWSAWSAKHD*THKLNG
Trigger: ACCATTAAGCTTGTGCGTCAAGTCATGTTTTGCAGA...CCAGGCTGACCAACAAGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581334.1
CDS-3UTR CAA 90 bp GTCGGCTTGGTTATTGCCCTTAAACTTGGTCTCCCCATTATCACCTCCAAGCATCCTCTTCTCCATGACTaGACGCACAAGCTTAATGGT +
Preference number: 5 (lower is better)
Translates to: VGLVIALKLGLPIITSKHPLLHD*THKLNG
Trigger: ACCATTAAGCTTGTGCGTCAAGTCATGGAGAAGAGG...ATGCTTGGAGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAACCAAGCCGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTACAGCTGACCAAATGTaGATGCCCTCCAGAACTCAT +
Preference number: 5 (lower is better)
Translates to: FWYLLALHGGAEPMILFSTADQM*MPSRTH
Trigger: ATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTGT...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCATTTTAGTCTTCAGTTaGTTGTCCCCTGGAAGGTTA +
Preference number: 5 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGILVFS*LSPGRL
Trigger: TAACCTTCCAGGGGACAACAAACTGAAGACTAAAAT...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATAGGACACACTTCAAATaGGAGAAGCCCAGGAGAATC +
Preference number: 5 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHRTHFK*EKPRRI
Trigger: GATTCTCCTGGGCTTCTCCAATTTGAAGTGTGTCCT...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TCCCCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACTACAGCTCACATGTGTaGAGTCCTGCACATCCATTA +
Preference number: 5 (lower is better)
Translates to: SPWPTDSCRSLMLMLILNYSSHV*SPAHPL
Trigger: TAATGGATGTGCAGGACTCAACACATGTGAGCTGTA...GTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTGATGGACATACATCTTaGAACAACTTTGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFDGHTS*NNFGNE
Trigger: TTCATTGCCAAAGTTGTTCAAAGATGTATGTCCATC...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGTGCTGGGGTGTCGGCTaGAATGGTTTCAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKCWGVG*NGFSFP
Trigger: AGGAAAGCTGAAACCATTCAAGCCGACACCCCAGCA...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGTGCTTCCATAAAGGGTaGAGAAATCCTGGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: SLQLTCVESCTSITTHTRCFHKG*RNPGQD
Trigger: ATCCTGCCCAGGATTTCTCAACCCTTTATGGAAGCA...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGCTTCAGTCTGGTGCTTaGGTTTCTCAGGTGGTAATC +
Preference number: 5 (lower is better)
Translates to: SLQLTCVESCTSITTHTRLQSGA*VSQVVI
Trigger: GATTACCACCTGAGAAACCAAAGCACCAGACTGAAG...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp ATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGGGTGTGTCGGCTTGGTTATaGCCCTTAAACTTGGTCTCC +
Preference number: 5 (lower is better)
Translates to: MSPRIQTQTYFSKKVQLGVSAWL*PLNLVS
Trigger: GGAGACCAAGTTTAAGGGCAATAACCAAGCCGACAC...ACCCAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TCCCTGTTAAGCAAGTTCAGATGCTGGGTCAGTGTGGGGGTGAGCCCATCGACATTTGGAGGCTTATCTTaGCTTTTCCCATCATTAGAA +
Preference number: 5 (lower is better)
Translates to: SLLSKFRCWVSVGVSPSTFGGLS*LFPSLE
Trigger: TTCTAATGATGGGAAAAGCAAAGATAAGCCTCCAAA...TGTCGATGGGCTCACCCCCACACTGACCCAGCATCTGAACTTGCTTAACAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCCTGCCTTCTTCCGCTTaGGAGGCTTATCTTTGCTTT +
Preference number: 5 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPLPSSA*EAYLCF
Trigger: AAAGCAAAGATAAGCCTCCAAAGCGGAAGAAGGCAG...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATTGGAGAGGCAAGCTaGTCAGAGCCTCCAGGTGGC +
Preference number: 5 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTIIGEAS*SEPPGG
Trigger: GCCACCTGGAGGCTCTGACAAGCTTGCCTCTCCAAT...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CACCCTGTGGAGAAATGCAGTGCTCCCTGGTTCTCAGGCAGGGTGAAGCAGTTTCTACCTCAAACAAAGTaGAACAACCTTCATGCAAAT +
Preference number: 5 (lower is better)
Translates to: HPVEKCSAPWFSGRVKQFLPQTK*NNLHAN
Trigger: ATTTGCATGAAGGTTGTTCAACTTTGTTTGAGGTAG...AAACTGCTTCACCCTGCCTGAGAACCAGGGAGCACTGCATTTCTCCACAGGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GGGACCATGCCCCATCCCGCTGATACAGATCCTGAATGGAATAATCAGGAATGGCTACATCTTATTACCTaGGGACACAAAAGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: GTMPHPADTDPEWNNQEWLHLIT*GHKSGR
Trigger: TCTGCCACTTTTGTGTCCCAAGGTAATAAGATGTAG...CCATTCCTGATTATTCCATTCAGGATCTGTATCAGCGGGATGGGGCATGGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTAGTCTTCAGTTTGTTGTCCCCTGGAAGGTTATACAGATTAACAAGGCCCTTAGTTGTGGGTAAGTTGTaGGGGGAGTGCTACACTGGC +
Preference number: 5 (lower is better)
Translates to: LVFSLLSPGRLYRLTRPLVVGKL*GECYTG
Trigger: GCCAGTGTAGCACTCCCCCAACAACTTACCCACAAC...TAAGGGCCTTGTTAATCTGTATAACCTTCCAGGGGACAACAAACTGAAGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp TTAAAGTTTGGACTCCTTCTCCTTGTGATGAAGAGAAACAGTGAGTCCAGCTCTCCTTTGAATACTGGGTaGGGGGTGAGGTACTGGTTG +
Preference number: 5 (lower is better)
Translates to: LKFGLLLLVMKRNSESSSPLNTG*GVRYWL
Trigger: CAACCAGTACCTCACCCCCAACCCAGTATTCAAAGG...AGAGCTGGACTCACTGTTTCTCTTCATCACAAGGAGAAGGAGTCCAAACTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTAAAGTTTGGACTCCTTCTCCTTGTGATGAAGAGAAACAGTGAGTCCAGCTCTGAGAATGCCCAGAGCTaGAAGAATCTCGAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: LKFGLLLLVMKRNSESSSENAQS*KNLEEG
Trigger: CCCCTCTTCGAGATTCTTCAAGCTCTGGGCATTCTC...AGAGCTGGACTCACTGTTTCTCTTCATCACAAGGAGAAGGAGTCCAAACTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTCACCATGTCTTCAACTGTCTCTGCAATGAGGGACAGTGCTGGGGTGTCGGCATACTGCTACTTAACTaGGAACTTGATGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: FHHVFNCLCNEGQCWGVGILLLN*ELDEPS
Trigger: AGAAGGTTCATCAAGTTCCAAGTTAAGTAGCAGTAT...GCCGACACCCCAGCACTGTCCCTCATTGCAGAGACAGTTGAAGACATGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCCAGGAACAGGCTTCATaGGAGAGGCAAGCTTGTCAG +
Preference number: 5 (lower is better)
Translates to: LTNLLGLDATVLAQAISSQEQAS*ERQACQ
Trigger: CTGACAAGCTTGCCTCTCCAATGAAGCCTGTTCCTG...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTTTCTGCAAAGTCACTTaGGCTTTAATGCTAGGGGAG +
Preference number: 5 (lower is better)
Translates to: FWYLLALHGGAEPMILFSFCKVT*ALMLGE
Trigger: CTCCCCTAGCATTAAAGCCAAAGTGACTTTGCAGAA...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCTTTAGAAGAAGCCATTaGAGGCCTAAGCCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSFRRSH*RPKPFS
Trigger: GGAGAAGGGCTTAGGCCTCAAATGGCTTCTTCTAAA...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATAAAGGTCCAATTGGGTaGCTACATAGTAGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHKGPIG*LHSSKG
Trigger: ACCCTTGCTACTATGTAGCAACCCAATTGGACCTTT...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CATGGGGGAGCTGAGCCCATGATACTATTCAGTACATTCCCCCTAAGATTCTCCACAAAAGTGGCAGAGTaGTTGAGAGCTGATGACAAT +
Preference number: 5 (lower is better)
Translates to: HGGAEPMILFSTFPLRFSTKVAE*LRADDN
Trigger: ATTGTCATCAGCTCTCAACAACTCTGCCACTTTTGT...GGAGAATCTTAGGGGGAATGTACTGAATAGTATCATGGGCTCAGCTCCCCCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACTAACTCGGGATTCTTaGATCTGGGATGAAGACAGA +
Preference number: 5 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPLTRDS*IWDEDR
Trigger: TCTGTCTTCATCCCAGATCAAAGAATCCCGAGTTAG...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS CCA 90 bp GGTCTGTCTGCAGATAAGATTGTGTTACTTGTCATAGACAAGGACTaGTCTGAAGAGATGGGTGATTTGGACCAACTCTCTGGCTTGATG +
Preference number: 5 (lower is better)
Translates to: GLSADKIVLLVIDKD*SEEMGDLDQLSGLM
Trigger: CATCAAGCCAGAGAGTTGGTCCAAATCACCCATCTCTTCAGACCAGTCCTTGTCTATGACAAGTAACACAATCTTATCTGCAGACAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCTTAGTCTTCAGTTTGTaGTCCCCTGGAAGGTTATAC +
Preference number: 5 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPLVFSL*SPGRLY
Trigger: GTATAACCTTCCAGGGGACAACAAACTGAAGACTAA...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGCAGATGTTCCTTCAATaGTCACTGATGCATTCATGC +
Preference number: 5 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKQMFLQ*SLMHSC
Trigger: GCATGAATGCATCAGTGACAATTGAAGGAACATCTG...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCATTATTGCCCTTAAACTaGGTCTCCCCATTATCACCT +
Preference number: 5 (lower is better)
Translates to: VTNLKPGFGNYILRCLSPLLPLN*VSPLSP
Trigger: AGGTGATAATGGGGAGACCAAGTTTAAGGGCAATAA...TGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATATCAACTGTGTCGGCTaGGTTATTGCCCTTAAACTT +
Preference number: 5 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHINCVG*VIALKL
Trigger: AAGTTTAAGGGCAATAACCAAGCCGACACAGTTGAT...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTTCCAAAAAGGTCCAATaGGGTTGCTACATAGTAGCA +
Preference number: 5 (lower is better)
Translates to: FWYLLALHGGAEPMILFSSKKVQ*GCYIVA
Trigger: TGCTACTATGTAGCAACCCAATTGGACCTTTTTGGA...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGTCATTTTGGTATTTGTaGGCCCTGCATGGGGGAGCT +
Preference number: 5 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRSFWYL*ALHGGA
Trigger: AGCTCCCCCATGCAGGGCCAACAAATACCAAAATGA...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATATATCCTGCGTTGTTaGTCCCCACCACCCCACCCC +
Preference number: 5 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIYILRC*SPPPHP
Trigger: GGGGTGGGGTGGTGGGGACAAACAACGCAGGATATA...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATCCTCTTCTCCATGACTaGACGCACAAGCTTAATGGT +
Preference number: 5 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDPLLHD*THKLNG
Trigger: ACCATTAAGCTTGTGCGTCAAGTCATGGAGAAGAGG...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGGTAAAGATGTTACTTaGAGAGCCTTCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSGKDVT*RAFCNV
Trigger: GACATTGCAGAAGGCTCTCAAAGTAACATCTTTACC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATAATGGGAGATGCAGTCTaGTCATCCAGTAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: LASEMLSTSCPSKTNSRIMGDAV*SSSRSE
Trigger: TTCTGACCTACTGGATGACAAGACTGCATCTCCCAT...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTGAAGGGGTCCATTTATaGTCAACTGGATGTGACCCC +
Preference number: 5 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSEGVHL*STGCDP
Trigger: GGGGTCACATCCAGTTGACAATAAATGGACCCCTTC...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTGAAGGGGTCCATTTATaGTCAACTGGATGTGACCCC +
Preference number: 5 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFEGVHL*STGCDP
Trigger: GGGGTCACATCCAGTTGACAATAAATGGACCCCTTC...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp CTACATAGTAGCAAGGGTTTATCTTCATGCTCACCTAGCATTCCAGGCCCCCATGGGTGCATAAGTTGGTaGAGTTTCAAACAATGGAAT +
Preference number: 5 (lower is better)
Translates to: LHSSKGLSSCSPSIPGPHGCISW*SFKQWN
Trigger: ATTCCATTGTTTGAAACTCAACCAACTTATGCACCC...ATGGGGGCCTGGAATGCTAGGTGAGCATGAAGATAAACCCTTGCTACTATGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CCATCGACAATTCAGGGGCTTATCCTTCATCCAGATCCTAACTCGGGATTCTTTTTCTTTTTCTTGGTCTaGTTGCTCCCCGAGCATATT +
Preference number: 5 (lower is better)
Translates to: PSTIQGLILHPDPNSGFFFFFLV*LLPEHI
Trigger: AATATGCTCGGGGAGCAACAAGACCAAGAAAAAGAA...AAAGAATCCCGAGTTAGGATCTGGATGAAGGATAAGCCCCTGAATTGTCGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TCTTATGTTTCTCTGTGCTGTATTCTGGAAGTGGTCGGATACCATCGTCTGAGCGTGAGTCAACATCCATaGAAAATAGCTCCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: SYVSLCCILEVVGYHRLSVSQHP*KIAPSE
Trigger: TTCAGAGGGAGCTATTTTCAATGGATGTTGACTCAC...GCTCAGACGATGGTATCCGACCACTTCCAGAATACAGCACAGAGAAACATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCACCATACTGCTACTTAACTaGGAACTTGATGAACCTTCT +
Preference number: 5 (lower is better)
Translates to: HQPQAWFWQLYPALFVPTILLLN*ELDEPS
Trigger: AGAAGGTTCATCAAGTTCCAAGTTAAGTAGCAGTAT...GGTGGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTCTGCTCAGTCCATGCTaGGTTATGGGAGAGGAGCCT +
Preference number: 5 (lower is better)
Translates to: LRTSVALETVSWISIFLCLLSPC*VMGEEP
Trigger: AGGCTCCTCTCCCATAACCAAGCATGGACTGAGCAG...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTGATGTCCCCCAGAATCCAGACTCAGACCTATTTCTCCAAAAAGGTCCAATTGTCTAATTCACCCAGCTaGATGTCAAAGCCATGCCAT +
Preference number: 5 (lower is better)
Translates to: LMSPRIQTQTYFSKKVQLSNSPS*MSKPCH
Trigger: ATGGCATGGCTTTGACATCAAGCTGGGTGAATTAGA...CAATTGGACCTTTTTGGAGAAATAGGTCTGAGTCTGGATTCTGGGGGACATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGTACTCATTTTGGTATTaGTTGGCCCTGCATGGGGGA +
Preference number: 5 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRYSFWY*LALHGG
Trigger: TCCCCCATGCAGGGCCAACAAATACCAAAATGAGTA...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTGTTGACTTCATGTCCTaGCCTTCTTTTGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: FWYLLALHGGAEPMILFSVDFMS*PSFETE
Trigger: TTCTGTTTCAAAAGAAGGCAAGGACATGAAGTCAAC...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp ACTGTTTTATCTCAGGGAGCATACAGTGGAGTGATTAAAGTTTGGACTCCTTCTCCTCTTCTCCATGACTaGACGCACAAGCTTAATGGT +
Preference number: 5 (lower is better)
Translates to: TVLSQGAYSGVIKVWTPSPLLHD*THKLNG
Trigger: ACCATTAAGCTTGTGCGTCAAGTCATGGAGAAGAGG...AGAAGGAGTCCAAACTTTAATCACTCCACTGTATGCTCCCTGAGATAAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTATGGGAGATGCAGTCTaGTCATCCAGTAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTIMGDAV*SSSRSE
Trigger: TTCTGACCTACTGGATGACAAGACTGCATCTCCCAT...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGAATTTTTGAGAGGACCCTCCAAATACTGAGAACTTCTGTTGCACTCGAAACAGGTGCAATTGGGAGTTaGTACACAGCAGATGTTCCT +
Preference number: 5 (lower is better)
Translates to: RIFERTLQILRTSVALETGAIGS*YTADVP
Trigger: AGGAACATCTGCTGTGTACAAACTCCCAATTGCACC...TGTTTCGAGTGCAACAGAAGTTCTCAGTATTTGGAGGGTCCTCTCAAAAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATTACAGCTCACATGTGTaGAGTCCTGCACATCCATTA +
Preference number: 5 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDYSSHV*SPAHPL
Trigger: TAATGGATGTGCAGGACTCAACACATGTGAGCTGTA...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TTTTGGTATTTGTTGGCCCTGCATGGGGGAGCTGAGCCCATGATACTATTCAGTGATGGACATACATCTTaGAACAACTTTGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: FWYLLALHGGAEPMILFSDGHTS*NNFGNE
Trigger: TTCATTGCCAAAGTTGTTCAAAGATGTATGTCCATC...ACTGAATAGTATCATGGGCTCAGCTCCCCCATGCAGGGCCAACAAATACCAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGGATTATCTTTAAGAAGGTTCATGAGCATCGGGTGGTTCTTGGTGTTGCCGGCGATGGACATACATCTTaGAACAACTTTGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: RIIFKKVHEHRVVLGVAGDGHTS*NNFGNE
Trigger: TTCATTGCCAAAGTTGTTCAAAGATGTATGTCCATC...GCCGGCAACACCAAGAACCACCCGATGCTCATGAACCTTCTTAAAGATAATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CTGAGAACTTCTGTTGCACTCGAAACAGTCTCCTGGATTTCTATATTTTTATGTCCACTCATTGGGTTGTaGCCTGTGGTCATGCCATAC +
Preference number: 5 (lower is better)
Translates to: LRTSVALETVSWISIFLCPLIGL*PVVMPY
Trigger: GTATGGCATGACCACAGGCAACAACCCAATGAGTGG...ACATAAAAATATAGAAATCCAGGAGACTGTTTCGAGTGCAACAGAAGTTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAGTACCACTCATTGGGTaGTTGCCTGTGGTCATGCCA +
Preference number: 5 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIVPLIG*LPVVMP
Trigger: TGGCATGACCACAGGCAACAACCCAATGAGTGGTAC...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTTGCTTCCATAAAGGGTaGAGAAATCCTGGGCAGGAT +
Preference number: 5 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFCFHKG*RNPGQD
Trigger: ATCCTGCCCAGGATTTCTCAACCCTTTATGGAAGCA...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGTTTACAGCTCACATGTGTTGAGTCCTGCACATCCATTACCACACACACCAGGATCATTATCCCCACTTaGGCTGCTTTCATCAAAATA +
Preference number: 5 (lower is better)
Translates to: SLQLTCVESCTSITTHTRIIIPT*AAFIKI
Trigger: TATTTTGATGAAAGCAGCCAAAGTGGGGATAATGAT...CCTGGTGTGTGTGGTAATGGATGTGCAGGACTCAACACATGTGAGCTGTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp CCATGGCCCACCGACTCATGCCGATCTTTGATGCTCATGCTCATATTAAACAAGTTTGGAGGCTTATCTTaGCTTTTCCCATCATTAGAA +
Preference number: 5 (lower is better)
Translates to: PWPTDSCRSLMLMLILNKFGGLS*LFPSLE
Trigger: TTCTAATGATGGGAAAAGCAAAGATAAGCCTCCAAA...CTTGTTTAATATGAGCATGAGCATCAAAGATCGGCATGAGTCGGTGGGCCATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp AGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTTGTTTGTCCCCTCTCGGTCCCTATCTTaGTCTTTTACTTTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: SHQPQAWFWQLYPALFVPSRSLS*SFTFFF
Trigger: AAAGAAGAAAGTAAAAGACAAAGATAGGGACCGAGA...GGGGACAAACAACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATGGTAAAGATGTTACTTaGAGAGCCTTCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDGKDVT*RAFCNV
Trigger: GACATTGCAGAAGGCTCTCAAAGTAACATCTTTACC...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp GACCAAAGTCCTTCATTTGCCCATGACTCAAACGGACAACTACCTCAAACAAAGCCAAACGATCAGTCATaGCTGGTAAAGATGTTACTT +
Preference number: 5 (lower is better)
Translates to: DQSPSFAHDSNGQLPQTKPNDQS*LVKMLL
Trigger: AAGTAACATCTTTACCAGCAATGACTGATCGTTTGG...CTTTGTTTGAGGTAGTTGTCCGTTTGAGTCATGGGCAAATGAAGGACTTTGGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AACCCCATGCTTCAGTTTATCTATGACAGCTGTCAAGGACGGCTTCTTGTTTCTGGGTGCATAAGTTGGTaGAGTTTCAAACAATGGAAT +
Preference number: 5 (lower is better)
Translates to: NPMLQFIYDSCQGRLLVSGCISW*SFKQWN
Trigger: ATTCCATTGTTTGAAACTCAACCAACTTATGCACCC...AGAAACAAGAAGCCGTCCTTGACAGCTGTCATAGATAAACTGAAGCATGGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGACAGGGGTGCATAAGTaGGTTGAGTTTCAAACAATG +
Preference number: 5 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRTGVHK*VEFQTM
Trigger: CATTGTTTGAAACTCAACCAACTTATGCACCCCTGT...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATAACAGGGGTGCATAAGTaGGTTGAGTTTCAAACAATG +
Preference number: 5 (lower is better)
Translates to: LASEMLSTSCPSKTNSRITGVHK*VEFQTM
Trigger: CATTGTTTGAAACTCAACCAACTTATGCACCCCTGT...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp AAAAGGTCTGTTAGAAGAACTATGAGATGGAGACTTTCCCTCAGTGTCTGCCTTACAGGGGTGCATAAGTaGGTTGAGTTTCAAACAATG +
Preference number: 5 (lower is better)
Translates to: KRSVRRTMRWRLSLSVCLTGVHK*VEFQTM
Trigger: CATTGTTTGAAACTCAACCAACTTATGCACCCCTGT...AAGGCAGACACTGAGGGAAAGTCTCCATCTCATAGTTCTTCTAACAGACCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp GAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCTAATGTACAGCTCACATGTGTaGAGTCCTGCACATCCATTA +
Preference number: 5 (lower is better)
Translates to: EPEIFMYIRAGYDQEPLMYSSHV*SPAHPL
Trigger: TAATGGATGTGCAGGACTCAACACATGTGAGCTGTA...CATTAGGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTTTTTTCTTGGTCTTGTaGCTCCCCGAGCATATTTCC +
Preference number: 5 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFFFLVL*LPEHIS
Trigger: GGAAATATGCTCGGGGAGCAACAAGACCAAGAAAAA...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
42% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATAGGGTGAGTCAACATCCATaGAAAATAGCTCCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: KRNQVKLRIHKTPAAEDRVSQHP*KIAPSE
Trigger: TTCAGAGGGAGCTATTTTCAATGGATGTTGACTCAC...CCTATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CAATTGGGAGTTTGTACACAGCAGATGTTCCTTCAATTGTCACTGATGCATTCATATCACCTCCAAGCATaGGCACCCCCAAAGTATTTA +
Preference number: 5 (lower is better)
Translates to: QLGVCTQQMFLQLSLMHSYHLQA*APPKYL
Trigger: TAAATACTTTGGGGGTGCCAATGCTTGGAGGTGATA...TGAATGCATCAGTGACAATTGAAGGAACATCTGCTGTGTACAAACTCCCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp TTAGTCTTCAGTTTGTTGTCCCCTGGAAGGTTATACAGATTAACAAGGCCCTTAGCAGGAGCTAAAGCTTaGCCGGCTACTGAAATAATA +
Preference number: 5 (lower is better)
Translates to: LVFSLLSPGRLYRLTRPLAGAKA*PATEII
Trigger: TATTATTTCAGTAGCCGGCAAAGCTTTAGCTCCTGC...TAAGGGCCTTGTTAATCTGTATAACCTTCCAGGGGACAACAAACTGAAGACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577831.5
CDS-3UTR CAA 90 bp AACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAACTATTCGGCCTTCCATCATTTaGAACCCTAAACCTCATAGA +
Preference number: 5 (lower is better)
Translates to: NKMLGCRLLAHCGSRRTIRPSII*NPKPHR
Trigger: TCTATGAGGTTTAGGGTTCAAAATGATGGAAGGCCG...AATAGTTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTTGTGAAGGGCTCTTATaGATGTCCCCCAGAATCCAG +
Preference number: 5 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLCEGLL*MSPRIQ
Trigger: CTGGATTCTGGGGGACATCAATAAGAGCCCTTCACA...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATACAATTATATCCTGCGTaGTTTGTCCCCACCACCCCA +
Preference number: 5 (lower is better)
Translates to: RKKIFQESPTSSLVLAIIQLYPA*FVPTTP
Trigger: TGGGGTGGTGGGGACAAACAACGCAGGATATAATTG...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTGGTAAAGATGTTACTTaGAGAGCCTTCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFGKDVT*RAFCNV
Trigger: GACATTGCAGAAGGCTCTCAAAGTAACATCTTTACC...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp CAGAAGAGGAATCAGGTCAAACTGAGAATACATAAGACACCAGCAGCAGAAGATATTTTAGTCTTCAGTTaGTTGTCCCCTGGAAGGTTA +
Preference number: 5 (lower is better)
Translates to: QKRNQVKLRIHKTPAAEDILVFS*LSPGRL
Trigger: TAACCTTCCAGGGGACAACAAACTGAAGACTAAAAT...ATCTTCTGCTGCTGGTGTCTTATGTATTCTCAGTTTGACCTGATTCCTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp AATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATATCCTGCGTCGGAGGTGGAAACCTTaGATTTGTCTTTATCACTTT +
Preference number: 5 (lower is better)
Translates to: NLSRVTNLKPGFGNYILRRRWKP*ICLYHF
Trigger: AAAGTGATAAAGACAAATCAAAGGTTTCCACCTCCG...ACGCAGGATATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CTGCAAACAAAATGCTGGGATGCAGACTTTTGGCACATTGTGGAAGTAGGAGAAACCCCTTATGGTGGTTaGCCTATAAACTTATCAATA +
Preference number: 5 (lower is better)
Translates to: LQTKCWDADFWHIVEVGETPYGG*PINLSI
Trigger: TATTGATAAGTTTATAGGCAAACCACCATAAGGGGT...TTCTCCTACTTCCACAATGTGCCAAAAGTCTGCATCCCAGCATTTTGTTTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CTGACTAATTTGCTTGGGCTTGATGCTACAGTATTAGCACAAGCTATAAGCTCCGCATCAAGGAATGTATaGCTTTTTCATTTTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LTNLLGLDATVLAQAISSASRNV*LFHFLP
Trigger: GGGCAGAAAATGAAAAAGCAATACATTCCTTGATGC...GGAGCTTATAGCTTGTGCTAATACTGTAGCATCAAGCCCAAGCAAATTAGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp CTAGCTTCTGAGATGTTAAGTACTTCCTGCCCCTCCAAAACTAACTCAAGGATAGTTGACTTCATGTCCTaGCCTTCTTTTGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: LASEMLSTSCPSKTNSRIVDFMS*PSFETE
Trigger: TTCTGTTTCAAAAGAAGGCAAGGACATGAAGTCAAC...TATCCTTGAGTTAGTTTTGGAGGGGCAGGAAGTACTTAACATCTCAGAAGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCGACTCATGCCGATCTTaGATGCTCATGCTCATATTA +
Preference number: 5 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPDSCRS*MLMLIL
Trigger: TAATATGAGCATGAGCATCAAAGATCGGCATGAGTC...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp AGAAAGAAAATCTTTCAAGAGTCACCAACCTCAAGCCTGGTTTTGGCAATTATAACCTCAAGCCTGGTTTaGGCAATTATATCCTGCGTT +
Preference number: 5 (lower is better)
Translates to: RKKIFQESPTSSLVLAIITSSLV*AIISCV
Trigger: AACGCAGGATATAATTGCCAAAACCAGGCTTGAGGT...TATAATTGCCAAAACCAGGCTTGAGGTTGGTGACTCTTGAAAGATTTTCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCCCAAACGATCAGTCATaGCTGGTAAAGATGTTACTT +
Preference number: 5 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPPNDQS*LVKMLL
Trigger: AAGTAACATCTTTACCAGCAATGACTGATCGTTTGG...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp TATTTCTCCAAAAAGGTCCAATTGGGTTGCTACATAGTAGCAAGGGTTTATCTTTTAGTCTTCAGTTTGTaGTCCCCTGGAAGGTTATAC +
Preference number: 5 (lower is better)
Translates to: YFSKKVQLGCYIVARVYLLVFSL*SPGRLY
Trigger: GTATAACCTTCCAGGGGACAACAAACTGAAGACTAA...AAGATAAACCCTTGCTACTATGTAGCAACCCAATTGGACCTTTTTGGAGAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS-3UTR CAA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCATTTTAGTCTTCAGTTaGTTGTCCCCTGGAAGGTTA +
Preference number: 5 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPILVFS*LSPGRL
Trigger: TAACCTTCCAGGGGACAACAAACTGAAGACTAAAAT...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ATATTGAACCTGAAATCTTTATGTACATCAGAGCAGGTTATGACCAAGAACCCCGGGTGCATAAGTTGGTaGAGTTTCAAACAATGGAAT +
Preference number: 5 (lower is better)
Translates to: ILNLKSLCTSEQVMTKNPGCISW*SFKQWN
Trigger: ATTCCATTGTTTGAAACTCAACCAACTTATGCACCC...GGGGTTCTTGGTCATAACCTGCTCTGATGTACATAAAGATTTCAGGTTCAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000300651.11
ENST00000394287.7
CDS-3UTR CAA 90 bp ACTGGCTCCCTGAAAGGGCTTCTGAGAATTCATGATATTGCTGCACTTAATTTTATCATTATCCCCACTTaGGCTGCTTTCATCAAAATA +
Preference number: 5 (lower is better)
Translates to: TGSLKGLLRIHDIAALNFIIIPT*AAFIKI
Trigger: TATTTTGATGAAAGCAGCCAAAGTGGGGATAATGAT...AAAATTAAGTGCAGCAATATCATGAATTCTCAGAAGCCCTTTCAGGGAGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS GCA 90 bp GCCAACACTTCCATGAAGAATCTTATCCAAGGGACCAGCATTAGTTaGTTTCCTGTAAGACAAGTGATCTATGTTTGCTTATATTTAATC +
Preference number: 5 (lower is better)
Translates to: ANTSMKNLIQGTSIS*FPVRQVIYVCLYLI
Trigger: GATTAAATATAAGCAAACATAGATCACTTGTCTTACAGGAAAGCAACTAATGCTGGTCCCTTGGATAAGATTCTTCATGGAAGTGTTGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584308.1
CDS CCA 72 bp ATAAGCCCTTCCCCACCACTAACGGAGGAAACAAGTTaGCTCGGGATCCCGGGACGCAGGGCACCAGCAGTC +
Preference number: 6 (lower is better)
Translates to: ISPSPPLTEETS*LGIPGRRAPAV
Trigger: GACTGCTGGTGCCCTGCGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGTTAGTGGTGGGGAAGGGCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS CAA 72 bp GATAAGCCCTTCCCCACCACTAACGGAGGAAACAAGTaGGCTCGGGATCCCGGGACGCAGGGCACCAGCAGT +
Preference number: 6 (lower is better)
Translates to: DKPFPTTNGGNK*ARDPGTQGTSS
Trigger: ACTGCTGGTGCCCTGCGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGTTAGTGGTGGGGAAGGGCTTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS GCA 72 bp ATCAATCTGAAGTCCCCGGCGGCAAGAAGAGAAGGGTaGTCGAGGCCGCCGCCATCTTCCCCAACGGAACTT +
Preference number: 6 (lower is better)
Translates to: INLKSPAARREG*SRPPPSSPTEL
Trigger: AAGTTCCGTTGGGGAAGATGGCGGCGGCCTCGAGCACCCTTCTCTTCTTGCCGCCGGGGACTTCAGATTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS CAA 90 bp CCACAAAAGGATAAGCCCTTCCCCACCACTAACGGAGGAAACAAGTaGGCTCGGGATCCCGGGACGCAGGGCACCAGCAGTCCCTACTCT +
Preference number: 6 (lower is better)
Translates to: PQKDKPFPTTNGGNK*ARDPGTQGTSSPYS
Trigger: AGAGTAGGGACTGCTGGTGCCCTGCGTCCCGGGATCCCGAGCCAACTTGTTTCCTCCGTTAGTGGTGGGGAAGGGCTTATCCTTTTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS TCA 72 bp ACCAGCAGTCCCTACTCTTCCCGGGAAGGATCAATCTaGAGTCCCCGGCGGCAAGAAGAGAAGGGTGCTCGA +
Preference number: 6 (lower is better)
Translates to: TSSPYSSREGSI*SPRRQEEKGAR
Trigger: TCGAGCACCCTTCTCTTCTTGCCGCCGGGGACTTCAGATTGATCCTTCCCGGGAAGAGTAGGGACTGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS CAA 90 bp TACTTTGAGAGCCTTCTGCAATGTCTCCAAACAGCTGACCAAATGTaGATGCCCTCCAGAACTCATCACAACCCTCTTCTCCATGACTTG +
Preference number: 6 (lower is better)
Translates to: YFESLLQCLQTADQM*MPSRTHHNPLLHDL
Trigger: CAAGTCATGGAGAAGAGGGTTGTGATGAGTTCTGGAGGGCATCAACATTTGGTCAGCTGTTTGGAGACATTGCAGAAGGCTCTCAAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
CDS CCA 72 bp CGCACAAGCTTAATGGTTTCACTCCAGGGTCTATTTTaGTTAAATTTTGCATGGAGCCGTTCCAGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: RTSLMVSLQGLF*LNFAWSRSRRE
Trigger: TTCTCTCCTGGAACGGCTCCATGCAAAATTTAACCAAAATAGACCCTGGAGTGAAACCATTAAGCTTGTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS CAA 72 bp ACGCACAAGCTTAATGGTTTCACTCCAGGGTCTATTTaGGTTAAATTTTGCATGGAGCCGTTCCAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: THKLNGFTPGSI*VKFCMEPFQER
Trigger: TCTCTCCTGGAACGGCTCCATGCAAAATTTAACCAAAATAGACCCTGGAGTGAAACCATTAAGCTTGTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS CAA 90 bp CATGACTTGACGCACAAGCTTAATGGTTTCACTCCAGGGTCTATTTaGGTTAAATTTTGCATGGAGCCGTTCCAGGAGAGAACTCATCTT +
Preference number: 6 (lower is better)
Translates to: HDLTHKLNGFTPGSI*VKFCMEPFQERTHL
Trigger: AAGATGAGTTCTCTCCTGGAACGGCTCCATGCAAAATTTAACCAAAATAGACCCTGGAGTGAAACCATTAAGCTTGTGCGTCAAGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS CCA 72 bp GCAGATAAGATTGTGTTACTTGTCATAGACAAGGACTaGTCTGAAGAGATGGGTGATTTGGACCAACTCTCT +
Preference number: 6 (lower is better)
Translates to: ADKIVLLVIDKD*SEEMGDLDQLS
Trigger: AGAGAGTTGGTCCAAATCACCCATCTCTTCAGACCAGTCCTTGTCTATGACAAGTAACACAATCTTATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000300651.11
CDS GCA 72 bp AATGGTTTCACTCCAGGGTCTATTTTGGTTAAATTTTaGATGGAGCCGTTCCAGGAGAGAACTCATCTTACT +
Preference number: 6 (lower is better)
Translates to: NGFTPGSILVKF*MEPFQERTHLT
Trigger: AGTAAGATGAGTTCTCTCCTGGAACGGCTCCATGCAAAATTTAACCAAAATAGACCCTGGAGTGAAACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000300651.11
ENST00000394287.7
ENST00000577831.5
ENST00000581334.1
CDS GCA 72 bp TCCATGAAGAATCTTATCCAAGGGACCAGCATTAGTTaGTTTCCTGTAAGACAAGTGATCTATGTTTGCTTA +
Preference number: 6 (lower is better)
Translates to: SMKNLIQGTSIS*FPVRQVIYVCL
Trigger: TAAGCAAACATAGATCACTTGTCTTACAGGAAAGCAACTAATGCTGGTCCCTTGGATAAGATTCTTCATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584308.1