RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MECR (Homo sapiens)

Ensembl gene IDs: ENSG00000116353

Ensembl transcript IDs: ENST00000263702.11, ENST00000373791.7, ENST00000453185.5, ENST00000463052.5, ENST00000463412.1, ENST00000464511.1, ENST00000464915.1, ENST00000473030.5, ENST00000474946.5, ENST00000475773.5, ENST00000475861.6, ENST00000478505.6, ENST00000482610.1, ENST00000483435.5, ENST00000484012.5, ENST00000489248.5, ENST00000490529.5, ENST00000493928.1

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGGATGGTaGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCT +
Preference number: 1 (lower is better)
Translates to: QDPRLWACAAWGQGW*PTGLCTASTHPGFA
Trigger: AGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 90 bp CTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGGATaGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTT +
Preference number: 1 (lower is better)
Translates to: LQDPRLWACAAWGQG*WPTGLCTASTHPGF
Trigger: AAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR GCA 90 bp TGGGCTTGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTaGACTGCCAGTACCCACCCAGGCTTTGCTTTCAGGGTGGTCAGA +
Preference number: 1 (lower is better)
Translates to: WACAAWGQGWWPTGL*TASTHPGFAFRVVR
Trigger: TCTGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 90 bp TCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTaGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCTTTCAGGGT +
Preference number: 1 (lower is better)
Translates to: SSVGLCSLGPGMVAY*PLHCQYPPRLCFQG
Trigger: ACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR GCA 90 bp GCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTaGAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGC +
Preference number: 1 (lower is better)
Translates to: AHQSVCSTGPSSVGL*SLGPGMVAYWPLHC
Trigger: GCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTaGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACC +
Preference number: 1 (lower is better)
Translates to: KAFVLQDPRLWACAA*GQGWWPTGLCTAST
Trigger: GGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR TCA 90 bp ATGCAGCTGATCCTCCCCAAGCCCTGGACTGGGCCGCAGGCTACCTaGGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTG +
Preference number: 1 (lower is better)
Translates to: MQLILPKPWTGPQAT*EAHQSVCSTGPSSV
Trigger: CACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCTTGGGGAGGATCAGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR GCA 90 bp TTGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTaGCAGTACCCACCCAGGCTTTGCTTTCAGGGTGGTCAGAAAATG +
Preference number: 1 (lower is better)
Translates to: LCSLGPGMVAYWPLH*QYPPRLCFQGGQKM
Trigger: CATTTTCTGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 90 bp CCTGAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTaGGCTTGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTT +
Preference number: 1 (lower is better)
Translates to: PEKHIKAFVLQDPRL*ACAAWGQGWWPTGL
Trigger: AAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 90 bp AGGAAGGGGGCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTaGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAG +
Preference number: 1 (lower is better)
Translates to: RKGASWCCELTSAQC*SFSTGMTSTFWKGE
Trigger: CTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGCCCCCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 90 bp GAGCCCACCTTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTaGGGCCTAGGGCAAGATCTTTATTCTGCTCTTACAGCACCCCAC +
Preference number: 1 (lower is better)
Translates to: EPTFKLHLKEAYPCP*GLGQDLYSALTAPH
Trigger: GTGGGGTGCTGTAAGAGCAGAATAAAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAAGGTGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
3UTR-3UTR TCA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGGTGGGAGCCCCAACTaGGGGGCCTGCACCCAGCCC +
Preference number: 2 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQGGSPN*GACTQP
Trigger: GGGCTGGGTGCAGGCCCCTCAGTTGGGGCTCCCACC...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCCCCCAAGCCCTGGACTaGGCCGCAGGCTACCTGAGA +
Preference number: 2 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFPQALD*AAGYLR
Trigger: TCTCAGGTAGCCTGCGGCCCAGTCCAGGGCTTGGGG...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CAA 90 bp GCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTaGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCC +
Preference number: 2 (lower is better)
Translates to: ALDWAAGYLRSTSKR*FYRTLVCGLVQLGA
Trigger: GGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGGGCCTCTTGGTGCTGTaGGCTGACCAGTGCACAGTG +
Preference number: 2 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARGLLVL*ADQCTV
Trigger: CACTGTGCACTGGTCAGCTCACAGCACCAAGAGGCC...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp TGGAGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGAACTGGTCTGGACTGTaGTCCTTCTTCCACTGGGAC +
Preference number: 2 (lower is better)
Translates to: WRLPRQTGSPAAGPGSRQNWSGL*SFFHWD
Trigger: GTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGTT...CTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463412.1
3UTR-3UTR CCA 90 bp GTGAGAGCCCACCTTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTGGGGTGGGCTTGTGCAGCTTaGGGCCAGGGATGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: VRAHLQTSPQGSIPLSLGWACAA*GQGWWP
Trigger: AGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCA...CCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAAGGTGGGCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
3UTR CAA 90 bp CAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTaGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTAC +
Preference number: 2 (lower is better)
Translates to: QSVCSTGPSSVGLCS*GPGMVAYWPLHCQY
Trigger: GTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp GCTGTGAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTGGGACATGCTGGGCTCTaGGGGCAAGAACTTCAGGTA +
Preference number: 2 (lower is better)
Translates to: AVSWPRRMRSHSVRISSLGHAGL*GQELQV
Trigger: TACCTGAAGTTCTTGCCCTCAGAGCCCAGCATGTCC...CAAGGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
3UTR-3UTR GCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCAAGGGGGCCTCTTGGTaGTGTGAGCTGACCAGTGCA +
Preference number: 2 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFKGASW*CELTSA
Trigger: TGCACTGGTCAGCTCACAGCACCAAGAGGCCCCCTT...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CAA 90 bp GAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTaGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCAC +
Preference number: 2 (lower is better)
Translates to: EAHQSVCSTGPSSVG*CSLGPGMVAYWPLH
Trigger: GTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCCTTGGTGCTGTGAGCTaGCCAGTGCACAGTGTTGGT +
Preference number: 2 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFLGAVS*PVHSVG
Trigger: ACCAACACTGTGCACTGGTCAGCTCACAGCACCAAG...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTAGGCCTCTTGGTGCTGTaGGCTGACCAGTGCACAGTG +
Preference number: 2 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLGLLVL*ADQCTV
Trigger: CACTGTGCACTGGTCAGCTCACAGCACCAAGAGGCC...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR GCA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGTACTGGCCTTTGCACTaGCAGTACCCACCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARYWPLH*QYPPRL
Trigger: AAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTA...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTATGGGGCCAGGGATGGTaGCCTACTGGCCTTTGCACT +
Preference number: 2 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLWGQGW*PTGLCT
Trigger: AGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCA...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR GCA 90 bp AGGGCTTCATGGAGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAAAATGAGCAGGCTCTaGAGACACAGGAAGGACATG +
Preference number: 2 (lower is better)
Translates to: RASWRLPRQTGSPAAGPGKMSRL*RHRKDM
Trigger: CATGTCCTTCCTGTGTCTGCAGAGCCTGCTCATTTT...CCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCTCCATGAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
3UTR-3UTR CCA 90 bp TTCCATGAGAGTGAAGACCCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAAGGAAGGGGGCCTCTTaGTGCTGTGAGCTGACCAGT +
Preference number: 2 (lower is better)
Translates to: FHESEDPTSKFLRALMTSRKGAS*CCELTS
Trigger: ACTGGTCAGCTCACAGCACCAAGAGGCCCCCTTCCT...TGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGGGTCTTCACTCTCATGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp ACTGTTCTGTGTCCTGTGGTGGGTTTAACAGCAGCACTCACTCTGCCTGCTAGATGGGCTTGTGCAGCTTaGGGCCAGGGATGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: TVLCPVVGLTAALTLPARWACAA*GQGWWP
Trigger: AGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCA...TCTAGCAGGCAGAGTGAGTGCTGCTGTTAAACCCACCACAGGACACAGAACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR GCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCTACCCACCCAGGCTTTaGTTTCAGGGTGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFYPPRL*FQGGQK
Trigger: TTTCTGACCACCCTGAAAGCAAAGCCTGGGTGGGTA...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGACCAGTGCACAGTGTTaGTCCTTCTCGACAGGGATG +
Preference number: 2 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQTSAQC*SFSTGM
Trigger: CATCCCTGTCGAGAAGGACCAACACTGTGCACTGGT...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGCTTTGCTTTCAGGGTaGTCAGAAAATGATTACTGG +
Preference number: 2 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPALLSG*SENDYW
Trigger: CCAGTAATCATTTTCTGACCACCCTGAAAGCAAAGC...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGAGGGTGGTCAGAAAATaGTTACTGGGGGAACACATG +
Preference number: 2 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARRVVRK*LLGEHM
Trigger: CATGTGTTCCCCCAGTAATCATTTTCTGACCACCCT...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp ACTGTTCTGTGTCCTGTGGTGGGTTTAACAGCAGCACTCACTCTGCCTGCTAGAGGGCCGCAGGCTACCTaGGAAGCACATCAAAGCGTT +
Preference number: 2 (lower is better)
Translates to: TVLCPVVGLTAALTLPARGPQAT*EAHQSV
Trigger: AACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCC...TCTAGCAGGCAGAGTGAGTGCTGCTGTTAAACCCACCACAGGACACAGAACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR GCA 90 bp GAAGCATACCCCTGTCCCTGGGGCCTAGGGCAAGATCTTTATTCTGCTCTTACATGGCCTACTGGCCTTTaGACTGCCAGTACCCACCCA +
Preference number: 2 (lower is better)
Translates to: EAYPCPWGLGQDLYSALTWPTGL*TASTHP
Trigger: TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCA...TGTAAGAGCAGAATAAAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
3UTR-3UTR GCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCATACTGGCCTTTGCACTaGCAGTACCCACCCAGGCTT +
Preference number: 2 (lower is better)
Translates to: EKHIKAFVLQDPRLWACAYWPLH*QYPPRL
Trigger: AAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTA...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR GCA 90 bp GCACAGTGTGAGGATCAGCTCCTTGAACTGGTCTGGACTGTGATCCTTCTTCCAGACACAGGAAGGACATaGTGGGCTCTGAGGGCAAGA +
Preference number: 2 (lower is better)
Translates to: AQCEDQLLELVWTVILLPDTGRT*WALRAR
Trigger: TCTTGCCCTCAGAGCCCAGCATGTCCTTCCTGTGTC...TGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAGCTGATCCTCACACTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463412.1
3UTR-3UTR CCA 90 bp ACTGTTCTGTGTCCTGTGGTGGGTTTAACAGCAGCACTCACTCTGCCTGCTAGAAGGAGAACAGTAGTCTaGGGAAGGTGGGAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: TVLCPVVGLTAALTLPARRRTVV*GRWEPQ
Trigger: TTGGGGCTCCCACCTTCCCCAGACTACTGTTCTCCT...TCTAGCAGGCAGAGTGAGTGCTGCTGTTAAACCCACCACAGGACACAGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp AGCAAATACCAAAAAGTCACGTCAAGCTCTTCTCTCGGCCTGAATAAAGCTCACGCTTGGGGCCAGGGATaGTGGCCTACTGGCCTTTGC +
Preference number: 2 (lower is better)
Translates to: SKYQKVTSSSSLGLNKAHAWGQG*WPTGLC
Trigger: GCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC...GTGAGCTTTATTCAGGCCGAGAGAAGAGCTTGACGTGACTTTTTGGTATTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263702.11
3UTR-3UTR CCA 90 bp GCACAGTGTGAGGATCAGCTCCTTGAACTGGTCTGGACTGTGATCCTTCTTCCAACAGGAAGGACATGCTaGGCTCTGAGGGCAAGAACT +
Preference number: 2 (lower is better)
Translates to: AQCEDQLLELVWTVILLPTGRTC*ALRART
Trigger: AGTTCTTGCCCTCAGAGCCCAGCATGTCCTTCCTGT...TGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAGCTGATCCTCACACTGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463412.1
3UTR-3UTR TCA 90 bp TGCCTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAACTCTTCCATGCAGCTaGTCCTCCCCAAGCCCTGGA +
Preference number: 2 (lower is better)
Translates to: CLWLRTTGILSMSPVRRATLPCS*SSPSPG
Trigger: TCCAGGGCTTGGGGAGGATCAGCTGCATGGAAGAGT...TGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp AGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTCCTTCTCGACAGGGATaGCTTCTACTTTTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: STSKRLFYRTLVCGLVQLPSRQG*LLLFGR
Trigger: CCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGG...AAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp TGCCTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCACTTGGTGCTGTGAGCTaGCCAGTGCACAGTGTTGGT +
Preference number: 2 (lower is better)
Translates to: CLWLRTTGILSMSPVRRALGAVS*PVHSVG
Trigger: ACCAACACTGTGCACTGGTCAGCTCACAGCACCAAG...TGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp AGCAAATACCAAAAAGTCACGTCAAGCTCTTCTCTCGGCCTGAATAAAGCTCACGGGCCGCAGGCTACCTaGGAAGCACATCAAAGCGTT +
Preference number: 2 (lower is better)
Translates to: SKYQKVTSSSSLGLNKAHGPQAT*EAHQSV
Trigger: AACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCC...GTGAGCTTTATTCAGGCCGAGAGAAGAGCTTGACGTGACTTTTTGGTATTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263702.11
3UTR-3UTR CCA 90 bp ACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGTTAGGAGAACAGTAGTCTaGGGAAGGTGGGAGCCCCAA +
Preference number: 2 (lower is better)
Translates to: TVLVLLDRDDFYFLEGRVRRTVV*GRWEPQ
Trigger: TTGGGGCTCCCACCTTCCCCAGACTACTGTTCTCCT...AACTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTTGCTTTCAGGGTaGTCAGAAAATGATTACTGG +
Preference number: 2 (lower is better)
Translates to: EKHIKAFVLQDPRLWACAALLSG*SENDYW
Trigger: CCAGTAATCATTTTCTGACCACCCTGAAAGCAAAGC...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR GCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTTACCCACCCAGGCTTTaGTTTCAGGGTGGTCAGAAA +
Preference number: 2 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVYPPRL*FQGGQK
Trigger: TTTCTGACCACCCTGAAAGCAAAGCCTGGGTGGGTA...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR GCA 90 bp AATGCACGGTTTATCAACGACCTCATGAACATTGAACATTTGGGGCTAGATTTTTGGCCTACTGGCCTTTaGACTGCCAGTACCCACCCA +
Preference number: 2 (lower is better)
Translates to: NARFINDLMNIEHLGLDFWPTGL*TASTHP
Trigger: TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCA...AAAATCTAGCCCCAAATGTTCAATGTTCATGAGGTCGTTGATAAACCGTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTCCTTCTCGACAGGGATaGCTTCTACTTTTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVPSRQG*LLLFGR
Trigger: CCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGG...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp AATGCACGGTTTATCAACGACCTCATGAACATTGAACATTTGGGGCTAGATTTTCTGATGACCTCAGCCTaGCATTCACTCTTCCATGCA +
Preference number: 2 (lower is better)
Translates to: NARFINDLMNIEHLGLDFLMTSA*HSLFHA
Trigger: TGCATGGAAGAGTGAATGCCAGGCTGAGGTCATCAG...AAAATCTAGCCCCAAATGTTCAATGTTCATGAGGTCGTTGATAAACCGTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR TCA 90 bp ATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACCTCATGAACAGGGTGGTCAGAAAATaGTTACTGGGGGAACACATG +
Preference number: 2 (lower is better)
Translates to: MVITVRLFNARFINDLMNRVVRK*LLGEHM
Trigger: CATGTGTTCCCCCAGTAATCATTTTCTGACCACCCT...GTTCATGAGGTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp AATGCACGGTTTATCAACGACCTCATGAACATTGAACATTTGGGGCTAGATTTTATGACTTCTACTTTTTaGAAGGGAGAGTTCAGACTT +
Preference number: 2 (lower is better)
Translates to: NARFINDLMNIEHLGLDFMTSTF*KGEFRL
Trigger: AAGTCTGAACTCTCCCTTCCAAAAAGTAGAAGTCAT...AAAATCTAGCCCCAAATGTTCAATGTTCATGAGGTCGTTGATAAACCGTGCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CCA 90 bp TTAGTCACTATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACATGACTTCTACTTTTTaGAAGGGAGAGTTCAGACTT +
Preference number: 2 (lower is better)
Translates to: LVTMVITVRLFNARFINDMTSTF*KGEFRL
Trigger: AAGTCTGAACTCTCCCTTCCAAAAAGTAGAAGTCAT...GTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCATAGTGACTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263702.11
3UTR CCA 72 bp GGCTTGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTaGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGC +
Preference number: 3 (lower is better)
Translates to: GLCSLGPGMVAY*PLHCQYPPRLC
Trigger: GCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 72 bp CGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGGATGGTaGCCTACTGGCCTTTGCACTGCCAGTACCCACCCA +
Preference number: 3 (lower is better)
Translates to: RLWACAAWGQGW*PTGLCTASTHP
Trigger: TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 72 bp CCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGGATaGTGGCCTACTGGCCTTTGCACTGCCAGTACCCAC +
Preference number: 3 (lower is better)
Translates to: PRLWACAAWGQG*WPTGLCTASTH
Trigger: GTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CAA 90 bp GTGAGAGCCCACCTTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTGGGGGTGGGCTTGTGCAGCTaGGGGCCAGGGATGGTGGCC +
Preference number: 3 (lower is better)
Translates to: VRAHLQTSPQGSIPLSLGVGLCS*GPGMVA
Trigger: GGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCAC...CCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAAGGTGGGCTCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263702.11
3UTR GCA 72 bp GCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTaGACTGCCAGTACCCACCCAGGCTTTGCTTTCAGG +
Preference number: 3 (lower is better)
Translates to: AAWGQGWWPTGL*TASTHPGFAFR
Trigger: CCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CAA 90 bp TTCCATGAGAGTGAAGACCCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCACCCTCGTCTGTGGGCTaGTGCAGCTTGGGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: FHESEDPTSKFLRALMTSPSSVG*CSLGPG
Trigger: CCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGG...TGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGGGTCTTCACTCTCATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR GCA 72 bp TTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTaGCAGTACCCACCCAGGCTTTGCTTTCAGGGTGGT +
Preference number: 3 (lower is better)
Translates to: LGPGMVAYWPLH*QYPPRLCFQGG
Trigger: ACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR GCA 72 bp AGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTaGAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCT +
Preference number: 3 (lower is better)
Translates to: SVCSTGPSSVGL*SLGPGMVAYWP
Trigger: AGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 72 bp GTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTaGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACT +
Preference number: 3 (lower is better)
Translates to: VLQDPRLWACAA*GQGWWPTGLCT
Trigger: AGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 72 bp CTCTTCCATGCAGCTGATCCTCCCCAAGCCCTGGACTaGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGT +
Preference number: 3 (lower is better)
Translates to: LFHAADPPQALD*AAGYLRSTSKR
Trigger: ACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCTTGGGGAGGATCAGCTGCATGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CAA 90 bp GAAGCATACCCCTGTCCCTGGGGCCTAGGGCAAGATCTTTATTCTGCTCTTACACCCTCGTCTGTGGGCTaGTGCAGCTTGGGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: EAYPCPWGLGQDLYSALTPSSVG*CSLGPG
Trigger: CCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGG...TGTAAGAGCAGAATAAAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263702.11
3UTR-3UTR CAA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCGACCAGTGCACAGTGTaGGTCCTTCTCGACAGGGAT +
Preference number: 3 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFDQCTV*VLLDRD
Trigger: ATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTC...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR TCA 72 bp ATCCTCCCCAAGCCCTGGACTGGGCCGCAGGCTACCTaGGAAGCACATCAAAGCGTTTGTTCTACAGGACCC +
Preference number: 3 (lower is better)
Translates to: ILPKPWTGPQAT*EAHQSVCSTGP
Trigger: GGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCTTGGGGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 72 bp CACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTaGGCTTGTGCAGCTTGGGGCCAGGGATGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: HIKAFVLQDPRL*ACAAWGQGWWP
Trigger: AGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR TCA 72 bp AGAAAAGCAGGAAGGGGGCCTCTTGGTGCTGTGAGCTaGCCAGTGCACAGTGTTGGTCCTTCTCGACAGGGA +
Preference number: 3 (lower is better)
Translates to: RKAGRGPLGAVS*PVHSVGPSRQG
Trigger: TCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGCCCCCTTCCTGCTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 72 bp ACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTaGCATTCACTCTTCCATGCAGCTGATCCTCCCCAA +
Preference number: 3 (lower is better)
Translates to: TSKFLRALMTSA*HSLFHAADPPQ
Trigger: TTGGGGAGGATCAGCTGCATGGAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR TCA 72 bp ATGACAGAAAAGCAGGAAGGGGGCCTCTTGGTGCTGTaGGCTGACCAGTGCACAGTGTTGGTCCTTCTCGAC +
Preference number: 3 (lower is better)
Translates to: MTEKQEGGLLVL*ADQCTVLVLLD
Trigger: GTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGCCCCCTTCCTGCTTTTCTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CAA 90 bp TGGAGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGCAAAAGCCTCGAAGTTaGAGATCCTTAAAAATGAGC +
Preference number: 3 (lower is better)
Translates to: WRLPRQTGSPAAGPGSRQQKPRS*RSLKMS
Trigger: GCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTG...CTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463412.1
3UTR GCA 72 bp TACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTaGTTTCAGGGTGGTCAGAAAATGATTACTGGGGGA +
Preference number: 3 (lower is better)
Translates to: YWPLHCQYPPRL*FQGGQKMITGG
Trigger: TCCCCCAGTAATCATTTTCTGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 72 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTaGTCCTTCTCGACAGGGATGACTTCTACTTTTTGG +
Preference number: 3 (lower is better)
Translates to: ASWCCELTSAQC*SFSTGMTSTFW
Trigger: CCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR-3UTR CAA 90 bp TTCCATGAGAGTGAAGACCCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGATGACTTCTACTTTTaGGAAGGGAGAGTTCAGACT +
Preference number: 3 (lower is better)
Translates to: FHESEDPTSKFLRALMTSDDFYF*EGRVQT
Trigger: AGTCTGAACTCTCCCTTCCAAAAAGTAGAAGTCATC...TGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGGGTCTTCACTCTCATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CCA 72 bp TTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTaGGGCCTAGGGCAAGATCTTTATTCTGCTCTTACA +
Preference number: 3 (lower is better)
Translates to: FKLHLKEAYPCP*GLGQDLYSALT
Trigger: TGTAAGAGCAGAATAAAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR TCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGTGGGAGCCCCAACTaGGGGGCCTGCACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPGGSPN*GACTQP
Trigger: GGGCTGGGTGCAGGCCCCTCAGTTGGGGCTCCCACC...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp TGGAGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGGGATGTGGCCTGGCTaGGGTGTCTGGCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: WRLPRQTGSPAAGPGSRQGMWPG*GVWPGS
Trigger: GGAGCCGGGCCAGACACCTCAGCCAGGCCACATCCC...CTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR TCA 90 bp AGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGGGAGGCTGTGCAGGGATTaGCACCCAGGGTGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RLPRQTGSPAAGPGSRQGRLCRD*HPGWQR
Trigger: GCGCTGCCACCCTGGGTGTCAATCCCTGCACAGCCT...CCCCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR TCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGGGTGGGAGCCCCAACTaGGGGGCCTGCACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGGGSPN*GACTQP
Trigger: GGGCTGGGTGCAGGCCCCTCAGTTGGGGCTCCCACC...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGGGCCTCCACGCGCTAACTaGCGCAGCAGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RLPRQTGSPAAGPGSRQGPPRAN*RSSSVE
Trigger: CTCCACAGAGCTGCTGCGGCAGTTAGCGCGTGGAGG...CCCCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp GGGGCTGTGAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCGCAGGGGCTGTGAGCTaGCCTCGGCGGATGAGATCG +
Preference number: 4 (lower is better)
Translates to: GAVSWPRRMRSHSVRISSAGAVS*PRRMRS
Trigger: CGATCTCATCCGCCGAGGCCAGCTCACAGCCCCTGC...GGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTCACAGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCACCCCAAGCCCTGGACTaGGCCGCAGGCTACCTGAGA +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPPQALD*AAGYLR
Trigger: TCTCAGGTAGCCTGCGGCCCAGTCCAGGGCTTGGGG...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAATCCTCCCCAAGCCCTaGACTGGGCCGCAGGCTACC +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPILPKP*TGPQAT
Trigger: GGTAGCCTGCGGCCCAGTCCAGGGCTTGGGGAGGAT...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGCCCGGTCACATTGCTaGCCACCGCTACCACCTGTG +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPARSHC*PPLPPV
Trigger: CACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGC...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGGGCGCCGCAGCAGCTCTGTaGAGCTTTTCCCACCAACAC +
Preference number: 4 (lower is better)
Translates to: GFQGRLVVLQRDLGAGRGAAAAL*SFSHQH
Trigger: GTGTTGGTGGGAAAAGCTCCACAGAGCTGCTGCGGC...GCCCCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp TGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCGCAGGGGCTGTGAGCTaGCCTCGGCGGATGAGATCG +
Preference number: 4 (lower is better)
Translates to: CAAWGQGWWPTGLCTASTAGAVS*PRRMRS
Trigger: CGATCTCATCCGCCGAGGCCAGCTCACAGCCCCTGC...GGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGGAGGCGGCAGGTCCGTaGCAGCCAGAAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGEAAGP*QPEAGS
Trigger: GCTCCCAGCTTCTGGCTGTCACGGACCTGCCGCCTC...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp TGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCTCAGTGCTTCCTCGCTaGACACAGCCTCGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: CAAWGQGWWPTGLCTASTSVLPR*TQPRSA
Trigger: GGCGGACCGAGGCTGTGTTCAGCGAGGAAGCACTGA...GGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp TGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCAGGACCCTCGTCTGTaGGCTTGTGCAGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CAAWGQGWWPTGLCTASTQDPRL*ACAAWG
Trigger: GCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTG...GGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGGGCTGGATGCATTCTGGATaGCAGAATCCCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GFQGRLVVLQRDLGAGRGWMHSG*QNPLAA
Trigger: TGCAGCCAGGGGATTCTGTCATCCAGAATGCATCCA...GCCCCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR TCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGCTGCGGCGATCTGGATaGCTGCTTGCCCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGLRRSG*LLAPLR
Trigger: GCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAG...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGGGCCCAGGAACGGGGCATTaGCTAAGCTTAGACAGCTGT +
Preference number: 4 (lower is better)
Translates to: GFQGRLVVLQRDLGAGRGPGTGH*LSLDSC
Trigger: ACAGCTGTCTAAGCTTAGGCAATGCCCCGTTCCTGG...GCCCCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCATTCGACGACCTTGGCTaGATCCCCGTGGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPFDDLG*IPVVPI
Trigger: TATGGGCACCACGGGGATCCAGCCAAGGTCGTCGAA...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGGGCACAGGAAGGACATGCTaGGCTCTGAGGGCAAGAACT +
Preference number: 4 (lower is better)
Translates to: GFQGRLVVLQRDLGAGRGTGRTC*ALRART
Trigger: AGTTCTTGCCCTCAGAGCCCAGCATGTCCTTCCTGT...GCCCCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR TCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCATGTCTCGGACCACATTaGTGGTTCTTAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPCLGPH*WFLGPG
Trigger: CCCTGGGCCTAAGAACCATCAATGTGGTCCGAGACA...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGTCAGGCAACATTTCTaGGCTGCCATGTGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPVRQHF*AAMCAQ
Trigger: CTGGGCACACATGGCAGCTCAGAAATGTTGCCTGAC...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373791.7
CDS-3UTR GCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGCCCGCCACAGGGTACTaGAGACCCACATGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGPATGY*RPTCSL
Trigger: GAGCGAGCATGTGGGTCTGCAGTACCCTGTGGCGGG...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GGAGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGTCCCCTGGCTGCAGTTaGTCGAAGTCCATCAACATC +
Preference number: 4 (lower is better)
Translates to: GGFQGRLVVLQRDLGAGRSPGCS*SKSINI
Trigger: GATGTTGATGGACTTCGAGCAACTGCAGCCAGGGGA...CCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGCCTCCACGCGCTAACTaGCGCAGCAGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARPPRAN*RSSSVE
Trigger: CTCCACAGAGCTGCTGCGGCAGTTAGCGCGTGGAGG...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GCTGTGAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTGCTTAGACAGCTGTCGTaGCAGGGGATGTGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: AVSWPRRMRSHSVRISSLLRQLS*QGMWPG
Trigger: GCCAGGCCACATCCCCTGGCACGACAGCTGTCTAAG...CAAGGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGGCCGCAGCAGCTCTGTaGAGCTTTTCCCACCAACAC +
Preference number: 4 (lower is better)
Translates to: ARDGGLLAFALPVPTQALAAAAL*SFSHQH
Trigger: GTGTTGGTGGGAAAAGCTCCACAGAGCTGCTGCGGC...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGTGGGCTTGTGCAGCTTaGGGCCAGGGATGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGWACAA*GQGWWP
Trigger: AGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCA...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCCAGGACCCTCGTCTGTaGGCTTGTGCAGCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFQDPRL*ACAAWG
Trigger: GCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTG...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CAA 72 bp TGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTaGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCAC +
Preference number: 4 (lower is better)
Translates to: CSTGPSSVGLCS*GPGMVAYWPLH
Trigger: GTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GTGAGAGCCCACCTTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTGGGGTCAGTGCTTCCTCGCTaGACACAGCCTCGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: VRAHLQTSPQGSIPLSLGSVLPR*TQPRSA
Trigger: GGCGGACCGAGGCTGTGTTCAGCGAGGAAGCACTGA...CCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAAGGTGGGCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp GAAGCATACCCCTGTCCCTGGGGCCTAGGGCAAGATCTTTATTCTGCTCTTACAGGCAGGCTCGGCGGATaGGGAGTAGGAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: EAYPCPWGLGQDLYSALTGRLGG*GVGGGG
Trigger: GCCGCCTCCTCCTACTCCGCATCCGCCGAGCCTGCC...TGTAAGAGCAGAATAAAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAACAGAATCCCCTGGCTaGAGTTGCTCGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPTESPG*SCSKSI
Trigger: GATGGACTTCGAGCAACTGCAGCCAGGGGATTCTGT...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp CTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCTTTCAGGGTGGTCACCTCCACGCGCTAACTaGCGCAGCAGCTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: LLAFALPVPTQALLSGWSPPRAN*RSSSVE
Trigger: CTCCACAGAGCTGCTGCGGCAGTTAGCGCGTGGAGG...TGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCACTGAGCTGCCATGTGTaGCCAGGAATTACGGTTTCG +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPLSCHV*PGITVS
Trigger: CGAAACCGTAATTCCTGGGCACACATGGCAGCTCAG...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373791.7
CDS-3UTR CCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGATGACAGAATCCCCTaGCTGCAGTTGCTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPDDRIP*LQLLEV
Trigger: GACTTCGAGCAACTGCAGCCAGGGGATTCTGTCATC...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GGGGCTGTGAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCAGAGCAAGCCGTGGCTaGGGCATGTCCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GAVSWPRRMRSHSVRISSRASRG*GMSLKK
Trigger: CTTCTTTAAGGACATGCCCCAGCCACGGCTTGCTCT...GGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTCACAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGCTTGGGGCCAGGGATaGTGGCCTACTGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQAWGQG*WPTGLC
Trigger: GCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
3UTR CAA 72 bp CAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTaGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGG +
Preference number: 4 (lower is better)
Translates to: QSVCSTGPSSVG*CSLGPGMVAYW
Trigger: CCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGCACCGCTACCACCTGTaGAACACCTTCGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGHRYHL*NTFVPS
Trigger: GGAGGGAACGAAGGTGTTGCACAGGTGGTAGCGGTG...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCGGAACTTGGATCAGTaGTTCCTCGCTGAACACAGC +
Preference number: 4 (lower is better)
Translates to: ARDGGLLAFALPVPTQALRNLDQ*FLAEHS
Trigger: GCTGTGTTCAGCGAGGAAGCACTGATCCAAGTTCCG...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GGGGCTGTGAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTCTTCTGTGATGACATaGTCAGCCCCCAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: GAVSWPRRMRSHSVRISSSSVMT*SAPRLF
Trigger: GAAGAGTCTGGGGGCTGAGCATGTCATCACAGAAGA...GGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTCACAGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp GCTGTGAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTGGACACAGGAAGGACATaGTGGGCTCTGAGGGCAAGA +
Preference number: 4 (lower is better)
Translates to: AVSWPRRMRSHSVRISSLDTGRT*WALRAR
Trigger: TCTTGCCCTCAGAGCCCAGCATGTCCTTCCTGTGTC...CAAGGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp TGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCAATCACCCAGTCTCCTaGCTTCAGCCCGGTCACATT +
Preference number: 4 (lower is better)
Translates to: CAAWGQGWWPTGLCTASTNHPVS*LQPGHI
Trigger: AATGTGACCGGGCTGAAGCCAGGAGACTGGGTGATT...GGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGAGGGCTGCGGCGATCTaGATGACTGCTTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQRAAAI*MTACPT
Trigger: AGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCCCT...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGAGAGCAAGCCGTGGCTaGGGCATGTCCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ARDGGLLAFALPVPTQALRASRG*GMSLKK
Trigger: CTTCTTTAAGGACATGCCCCAGCCACGGCTTGCTCT...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCTGGGAGCAGGCAGGGGCTCCTTGAACTGGTCTaGACTGTGATCCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RLPRQTGSPAAGPGSRQGLLELV*TVILLP
Trigger: TGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAG...CCCCTGCCTGCTCCCAGGTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCAGGAAGGGGGCCTCTTaGTGCTGTGAGCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFRKGAS*CCELTS
Trigger: ACTGGTCAGCTCACAGCACCAAGAGGCCCCCTTCCT...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCATTGACCTTGAACTCCTaGGCTCAAGTGATCCGCTTG +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPLTLNS*AQVIRL
Trigger: CAAGCGGATCACTTGAGCCCAGGAGTTCAAGGTCAA...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAAGGCTGTGCAGGGATTaGCACCCAGGGTGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: EKHIKAFVLQDPRLWACARLCRD*HPGWQR
Trigger: GCGCTGCCACCCTGGGTGTCAATCCCTGCACAGCCT...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCACTGCGGCGATCTGGATaGCTGCTTGCCCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: EKHIKAFVLQDPRLWACALRRSG*LLAPLR
Trigger: GCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAG...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGTGTCTCGGACCACATTaGTGGTTCTTAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARCLGPH*WFLGPG
Trigger: CCCTGGGCCTAAGAACCATCAATGTGGTCCGAGACA...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCACCTTCTCGACAGGGATaGCTTCTACTTTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPPSRQG*LLLFGR
Trigger: CCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGG...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTATCAGCCCGGTCACATTaGTGCCCACCGCTACCACCT +
Preference number: 4 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLSARSH*CPPLPP
Trigger: AGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGA...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GTGAGAGCCCACCTTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTGGGGAAGGGGGCCTCTTGGTaGTGTGAGCTGACCAGTGCA +
Preference number: 4 (lower is better)
Translates to: VRAHLQTSPQGSIPLSLGKGASW*CELTSA
Trigger: TGCACTGGTCAGCTCACAGCACCAAGAGGCCCCCTT...CCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAAGGTGGGCTCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CCA 90 bp GAAGCATACCCCTGTCCCTGGGGCCTAGGGCAAGATCTTTATTCTGCTCTTACAGCAGGGGCTGTGAGCTaGCCTCGGCGGATGAGATCG +
Preference number: 4 (lower is better)
Translates to: EAYPCPWGLGQDLYSALTAGAVS*PRRMRS
Trigger: CGATCTCATCCGCCGAGGCCAGCTCACAGCCCCTGC...TGTAAGAGCAGAATAAAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CCA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCTGATGACCTCAGCCTaGCATTCACTCTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: ARDGGLLAFALPVPTQALLMTSA*HSLFHA
Trigger: TGCATGGAAGAGTGAATGCCAGGCTGAGGTCATCAG...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGTTGACCTTGAACTCCTaGGCTCAAGTGATCCGCTTG +
Preference number: 4 (lower is better)
Translates to: ARDGGLLAFALPVPTQALLTLNS*AQVIRL
Trigger: CAAGCGGATCACTTGAGCCCAGGAGTTCAAGGTCAA...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GTGAGAGCCCACCTTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTGGGGCTAGCTCCAGGTTCTTaGGTTCGACGACCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: VRAHLQTSPQGSIPLSLGLAPGS*VRRPWL
Trigger: CAGCCAAGGTCGTCGAACTCAAGAACCTGGAGCTAG...CCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAAGGTGGGCTCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR TCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGAACTGGTCTGGACTGTaGTCCTTCTTCCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGNWSGL*SFFHWD
Trigger: GTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGTT...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGCTTGGTGCTGTGAGCTaGCCAGTGCACAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQLGAVS*PVHSVG
Trigger: ACCAACACTGTGCACTGGTCAGCTCACAGCACCAAG...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp CACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCTCTTGGTGCTGTaGGCTGACCAGTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: HIKAFVLQDPRLWACAAWGLLVL*ADQCTV
Trigger: CACTGTGCACTGGTCAGCTCACAGCACCAAGAGGCC...CCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp TGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCAGGGTGGTCAGAAAATaGTTACTGGGGGAACACATG +
Preference number: 4 (lower is better)
Translates to: CAAWGQGWWPTGLCTASTRVVRK*LLGEHM
Trigger: CATGTGTTCCCCCAGTAATCATTTTCTGACCACCCT...GGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTAACTCTTCCATGCAGCTaGTCCTCCCCAAGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLTLPCS*SSPSPG
Trigger: TCCAGGGCTTGGGGAGGATCAGCTGCATGGAAGAGT...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp CACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGTCAGCCCGGTCACATTaGTGCCCACCGCTACCACCT +
Preference number: 4 (lower is better)
Translates to: HIKAFVLQDPRLWACAAWSARSH*CPPLPP
Trigger: AGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGA...CCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp TTCCATGAGAGTGAAGACCCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGGCGATCTGGATGACTaGTTGCCCCACTCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: FHESEDPTSKFLRALMTSGDLDD*LPHSAV
Trigger: AACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCC...TGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGGGTCTTCACTCTCATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp TTCCATGAGAGTGAAGACCCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCATGGCCTACTGGCCTTTaGACTGCCAGTACCCACCCA +
Preference number: 4 (lower is better)
Translates to: FHESEDPTSKFLRALMTSWPTGL*TASTHP
Trigger: TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCA...TGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGGGTCTTCACTCTCATGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp TCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTGAACTGGTCTGGACTAGGCATGCCTCCCTCTaGACCCAGCTTACCACAGAG +
Preference number: 4 (lower is better)
Translates to: SADEIAQCEDQLLELVWTRHASL*TQLTTE
Trigger: CTCTGTGGTAAGCTGGGTGCAGAGGGAGGCATGCCT...AGTCCAGACCAGTTCAAGGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTATTCGACGACCTTGGCTaGATCCCCGTGGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLFDDLG*IPVVPI
Trigger: TATGGGCACCACGGGGATCCAGCCAAGGTCGTCGAA...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGAGAGCAAGCCGTGGCTaGGGCATGTCCTTAAAGAAG +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGRASRG*GMSLKK
Trigger: CTTCTTTAAGGACATGCCCCAGCCACGGCTTGCTCT...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCGTTGAGAGCAAGCCGTaGCTGGGGCATGTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFVESKP*LGHVLK
Trigger: TTTAAGGACATGCCCCAGCCACGGCTTGCTCTCAAC...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGCCCCATAGGTTACCATaGTTCCTCCACGCGCTAACT +
Preference number: 4 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARPHRLP*FLHALT
Trigger: AGTTAGCGCGTGGAGGAACCATGGTAACCTATGGGG...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCACCAGTGCACAGTGTTaGTCCTTCTCGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFTSAQC*SFSTGM
Trigger: CATCCCTGTCGAGAAGGACCAACACTGTGCACTGGT...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGTGGGGCCAGGGATGGTaGCCTACTGGCCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: HIKAFVLQDPRLWACAAWWGQGW*PTGLCT
Trigger: AGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCA...CCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTAGCATACCCCTGTCCCTaGGGCCTAGGGCAAGATCTT +
Preference number: 4 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLAYPCP*GLGQDL
Trigger: AAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGC...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCACGGTTTCGACGACCTTaGCTGGATCCCCGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: EKHIKAFVLQDPRLWACARFRRP*LDPRGA
Trigger: GGCACCACGGGGATCCAGCCAAGGTCGTCGAAACCG...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373791.7
3UTR CAA 72 bp TGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTaGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: WAAGYLRSTSKR*FYRTLVCGLVQ
Trigger: CTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp ACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGTTGAGGCGGCAGGTCCGTaGCAGCCAGAAGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TVLVLLDRDDFYFLEGRVEAAGP*QPEAGS
Trigger: GCTCCCAGCTTCTGGCTGTCACGGACCTGCCGCCTC...AACTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAAGGGTGGCAGCGCTCTaGAGAGGGATGTCACTCGGA +
Preference number: 4 (lower is better)
Translates to: EKHIKAFVLQDPRLWACARVAAL*RGMSLG
Trigger: TCCGAGTGACATCCCTCTTCAGAGCGCTGCCACCCT...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GTGAGAGCCCACCTTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTGGGGTACTGCAGACCCACATaGTCGCTCCAACCAACACAG +
Preference number: 4 (lower is better)
Translates to: VRAHLQTSPQGSIPLSLGYCRPT*SLQPTQ
Trigger: CTGTGTTGGTTGGAGCGAGCATGTGGGTCTGCAGTA...CCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAAGGTGGGCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTGGCAGGCTCGGCGGATaGGGAGTAGGAGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVGRLGG*GVGGGG
Trigger: GCCGCCTCCTCCTACTCCGCATCCGCCGAGCCTGCC...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GTGAGAGCCCACCTTCAAACTTCACCTCAAGGAAGCATACCCCTGTCCCTGGGGTCCCCTGGCTGCAGTTaGTCGAAGTCCATCAACATC +
Preference number: 4 (lower is better)
Translates to: VRAHLQTSPQGSIPLSLGSPGCS*SKSINI
Trigger: GATGTTGATGGACTTCGAGCAACTGCAGCCAGGGGA...CCCCAGGGACAGGGGTATGCTTCCTTGAGGTGAAGTTTGAAGGTGGGCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGTCTTCTGTGATGACATaGTCAGCCCCCAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGSSVMT*SAPRLF
Trigger: GAAGAGTCTGGGGGCTGAGCATGTCATCACAGAAGA...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp TTCCATGAGAGTGAAGACCCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCATACTGGCCTTTGCACTaGCAGTACCCACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: FHESEDPTSKFLRALMTSYWPLH*QYPPRL
Trigger: AAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTA...TGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGGGTCTTCACTCTCATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGTTGAGAGCAAGCCGTaGCTGGGGCATGTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQVESKP*LGHVLK
Trigger: TTTAAGGACATGCCCCAGCCACGGCTTGCTCTCAAC...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGTCACTCCAGCTCTTTTaGGATGATCACATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ARDGGLLAFALPVPTQALSLQLF*DDHMVR
Trigger: TCTCACCATGTGATCATCCCAAAAGAGCTGGAGTGA...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTAAGGAGAACAGTAGTCTaGGGAAGGTGGGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLRRTVV*GRWEPQ
Trigger: TTGGGGCTCCCACCTTCCCCAGACTACTGTTCTCCT...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGGCTTGGGGCCAGGGATaGTGGCCTACTGGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: AQCWSFSTGMTSTFWKGEAWGQG*WPTGLC
Trigger: GCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC...CTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGCTGATGACCTCAGCCTaGCATTCACTCTTCCATGCA +
Preference number: 4 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARLMTSA*HSLFHA
Trigger: TGCATGGAAGAGTGAATGCCAGGCTGAGGTCATCAG...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGAGGGTGGCAGCGCTCTaGAGAGGGATGTCACTCGGA +
Preference number: 4 (lower is better)
Translates to: AQCWSFSTGMTSTFWKGERVAAL*RGMSLG
Trigger: TCCGAGTGACATCCCTCTTCAGAGCGCTGCCACCCT...CTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTATGGATGCATTCTGGATaGCAGAATCCCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLWMHSG*QNPLAA
Trigger: TGCAGCCAGGGGATTCTGTCATCCAGAATGCATCCA...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp CTGGGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAGGCTCTGCTGCGGCGATCTGGATaGCTGCTTGCCCCACTCCGC +
Preference number: 4 (lower is better)
Translates to: LGQPKASKFEILKNEQALLRRSG*LLAPLR
Trigger: GCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAG...CAGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR TCA 90 bp CAGCTCCTTGAACTGGTCTGGACTGTGATCCTTCTTCCACTGGGACAACCAAAATCCCACCAACACAGTTaGGAGCAAGCCGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLLELVWTVILLPLGQPKSHQHS*EQAVAG
Trigger: CCCAGCCACGGCTTGCTCTCAACTGTGTTGGTGGGA...TTTTGGTTGTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR TCA 90 bp GAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTGGCCTCTTGGTGCTGTaGGCTGACCAGTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: ELTSAQCWSFSTGMTSTFGLLVL*ADQCTV
Trigger: CACTGTGCACTGGTCAGCTCACAGCACCAAGAGGCC...AAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp TTCCATGAGAGTGAAGACCCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCACGGAACTTGGATCAGTaGTTCCTCGCTGAACACAGC +
Preference number: 4 (lower is better)
Translates to: FHESEDPTSKFLRALMTSRNLDQ*FLAEHS
Trigger: GCTGTGTTCAGCGAGGAAGCACTGATCCAAGTTCCG...TGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGGGTCTTCACTCTCATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp ACTGTTCTGTGTCCTGTGGTGGGTTTAACAGCAGCACTCACTCTGCCTGCTAGAAAGGGGGCCTCTTGGTaGTGTGAGCTGACCAGTGCA +
Preference number: 4 (lower is better)
Translates to: TVLCPVVGLTAALTLPARKGASW*CELTSA
Trigger: TGCACTGGTCAGCTCACAGCACCAAGAGGCCCCCTT...TCTAGCAGGCAGAGTGAGTGCTGCTGTTAAACCCACCACAGGACACAGAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGTACCCACCCAGGCTTTaGTTTCAGGGTGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQYPPRL*FQGGQK
Trigger: TTTCTGACCACCCTGAAAGCAAAGCCTGGGTGGGTA...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTGAACTGAAAATGAGCAGGCTCTaGAGACACAGGAAGGACATG +
Preference number: 4 (lower is better)
Translates to: ELASADEIAQCEDQLLELKMSRL*RHRKDM
Trigger: CATGTCCTTCCTGTGTCTGCAGAGCCTGCTCATTTT...CAGTTCAAGGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp CTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCTTTCAGGGTGGTCAATGTCACTCGGAACTTaGATCAGTGCTTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LLAFALPVPTQALLSGWSMSLGT*ISASSL
Trigger: CAGCGAGGAAGCACTGATCCAAGTTCCGAGTGACAT...TGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCTTTCAGGGTGGTCACTGTTGGATGCATTCTaGATGACAGAATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLAFALPVPTQALLSGWSLLDAF*MTESPG
Trigger: GCCAGGGGATTCTGTCATCCAGAATGCATCCAACAG...TGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCCGCAGCAGCTCTGTaGAGCTTTTCCCACCAACAC +
Preference number: 4 (lower is better)
Translates to: EKHIKAFVLQDPRLWACAAAAAL*SFSHQH
Trigger: GTGTTGGTGGGAAAAGCTCCACAGAGCTGCTGCGGC...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGCTCCTTGAACTGGTCTaGACTGTGATCCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGLLELV*TVILLP
Trigger: TGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAG...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGAGGAGAACAGTAGTCTaGGGAAGGTGGGAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: HIKAFVLQDPRLWACAAWRRTVV*GRWEPQ
Trigger: TTGGGGCTCCCACCTTCCCCAGACTACTGTTCTCCT...CCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp TGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCTCATCCAGGCTAGAATaGGTGTTTCGCTCAAATCAT +
Preference number: 4 (lower is better)
Translates to: CAAWGQGWWPTGLCTASTSSRLE*VFRSNH
Trigger: ATGATTTGAGCGAAACACCCATTCTAGCCTGGATGA...GGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373791.7
CDS-3UTR CCA 90 bp GACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAGGCTCTGCAGACCAGGGGATGTGGCCTaGCTGAGGTGTCTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: DNQKPRSLRSLKMSRLCRPGDVA*LRCLAR
Trigger: CCGGGCCAGACACCTCAGCCAGGCCACATCCCCTGG...TCTGCAGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463412.1
3UTR CAA 72 bp CTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTaGCTTTCAGGGTGGTCAGAAAATGATTACTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLAFALPVPTQA*LSGWSENDYWG
Trigger: CCCCCAGTAATCATTTTCTGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCACTTGGTGCTGTGAGCTaGCCAGTGCACAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: EKHIKAFVLQDPRLWACALGAVS*PVHSVG
Trigger: ACCAACACTGTGCACTGGTCAGCTCACAGCACCAAG...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp TATGAAGGGCTTCATGGAGGCTTCCAAGGCAGACTGGTAGTCCTGCAGCGGGACCACTCCGCTGTTGGATaGATTCTGGATGACAGAATC +
Preference number: 4 (lower is better)
Translates to: YEGLHGGFQGRLVVLQRDHSAVG*ILDDRI
Trigger: GATTCTGTCATCCAGAATGCATCCAACAGCGGAGTG...GTCCCGCTGCAGGACTACCAGTCTGCCTTGGAAGCCTCCATGAAGCCCTTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp CACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGATCTGGATGACTGCTTaGCCCACTCCGCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: HIKAFVLQDPRLWACAAWIWMTA*PTPLLD
Trigger: ATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGAT...CCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp ACTGGTCTGGACTGTGATCCTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTGGCGATCTGGATGACTaGTTGCCCCACTCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: TGLDCDPSSTGTTKSLEVGDLDD*LPHSAV
Trigger: AACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCC...AACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTATACCCACCCAGGCTTTaGTTTCAGGGTGGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLYPPRL*FQGGQK
Trigger: TTTCTGACCACCCTGAAAGCAAAGCCTGGGTGGGTA...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCACAGCAGCACTCACTCTaGCTGCTAGATGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: EKHIKAFVLQDPRLWACAQQHSL*LLDASS
Trigger: GCTACTGGCATCTAGCAGGCAGAGTGAGTGCTGCTG...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGTGGGTAATTCTTTGTTaGAGTAGACTGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: ARDGGLLAFALPVPTQALWVILC*SRLFCV
Trigger: GACACAGAACAGTCTACTGCAACAAAGAATTACCCA...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp TCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTGAACTGGTCTGGACTCTGTTGGATGCATTCTaGATGACAGAATCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SADEIAQCEDQLLELVWTLLDAF*MTESPG
Trigger: GCCAGGGGATTCTGTCATCCAGAATGCATCCAACAG...AGTCCAGACCAGTTCAAGGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp GAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTAGGAAGGGGGCCTCTTaGTGCTGTGAGCTGACCAGT +
Preference number: 4 (lower is better)
Translates to: ELTSAQCWSFSTGMTSTFRKGAS*CCELTS
Trigger: ACTGGTCAGCTCACAGCACCAAGAGGCCCCCTTCCT...AAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTCCCCAAGCCCTGGACTaGGCCGCAGGCTACCTGAGA +
Preference number: 4 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVPQALD*AAGYLR
Trigger: TCTCAGGTAGCCTGCGGCCCAGTCCAGGGCTTGGGG...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAGGCTCTGCAGAGGGTGGCAGCGCTCTaGAGAGGGATGTCACTCGGA +
Preference number: 4 (lower is better)
Translates to: GQPKASKFEILKNEQALQRVAAL*RGMSLG
Trigger: TCCGAGTGACATCCCTCTTCAGAGCGCTGCCACCCT...CTGCAGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTCCCGCCACAGGGTACTaGAGACCCACATGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVPATGY*RPTCSL
Trigger: GAGCGAGCATGTGGGTCTGCAGTACCCTGTGGCGGG...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp CTCCTTGAACTGGTCTGGACTGTGATCCTTCTTCCACTGGGACAACCAAAAGCCACAGAATCCCCTGGCTaGAGTTGCTCGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: LLELVWTVILLPLGQPKATESPG*SCSKSI
Trigger: GATGGACTTCGAGCAACTGCAGCCAGGGGATTCTGT...GGCTTTTGGTTGTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp GAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTCAGCAGCACTCACTCTaGCTGCTAGATGCCAGTAGC +
Preference number: 4 (lower is better)
Translates to: ELTSAQCWSFSTGMTSTFQQHSL*LLDASS
Trigger: GCTACTGGCATCTAGCAGGCAGAGTGAGTGCTGCTG...AAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGATGTCACTCGGAACTTaGATCAGTGCTTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HIKAFVLQDPRLWACAAWMSLGT*ISASSL
Trigger: CAGCGAGGAAGCACTGATCCAAGTTCCGAGTGACAT...CCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GCACAGTGTGAGGATCAGCTCCTTGAACTGGTCTGGACTGTGATCCTTCTTCCAGATGACAGAATCCCCTaGCTGCAGTTGCTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: AQCEDQLLELVWTVILLPDDRIP*LQLLEV
Trigger: GACTTCGAGCAACTGCAGCCAGGGGATTCTGTCATC...TGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAGCTGATCCTCACACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp GGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAGGCTCTGCAGAGGGCTGCGGCGATCTaGATGACTGCTTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: GQPKASKFEILKNEQALQRAAAI*MTACPT
Trigger: AGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCCCT...CTGCAGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGATGACTTCTACTTTTTaGAAGGGAGAGTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: ARDGGLLAFALPVPTQALMTSTF*KGEFRL
Trigger: AAGTCTGAACTCTCCCTTCCAAAAAGTAGAAGTCAT...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CCCACGTCCAAGTTCCTCAGGGCCCTGATGACCTCAGCCTGGCATTCACTCTTCGCTTTGCTTTCAGGGTaGTCAGAAAATGATTACTGG +
Preference number: 4 (lower is better)
Translates to: PTSKFLRALMTSAWHSLFALLSG*SENDYW
Trigger: CCAGTAATCATTTTCTGACCACCCTGAAAGCAAAGC...GAAGAGTGAATGCCAGGCTGAGGTCATCAGGGCCCTGAGGAACTTGGACGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp TGCCTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCATGGGGCCAGGGATGGTaGCCTACTGGCCTTTGCACT +
Preference number: 4 (lower is better)
Translates to: CLWLRTTGILSMSPVRRAWGQGW*PTGLCT
Trigger: AGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCA...TGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGTGGATGCATTCTGGATaGCAGAATCCCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: AQCWSFSTGMTSTFWKGEWMHSG*QNPLAA
Trigger: TGCAGCCAGGGGATTCTGTCATCCAGAATGCATCCA...CTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTTCCCACCAACACAGTTaGGAGCAAGCCGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVSHQHS*EQAVAG
Trigger: CCCAGCCACGGCTTGCTCTCAACTGTGTTGGTGGGA...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp CAGCTCCTTGAACTGGTCTGGACTGTGATCCTTCTTCCACTGGGACAACCAAAAAACTGGTCTGGACTGTaGTCCTTCTTCCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: QLLELVWTVILLPLGQPKNWSGL*SFFHWD
Trigger: GTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGTT...TTTTGGTTGTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAGCTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp ACTGGTCTGGACTGTGATCCTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTCGGAACTTGGATCAGTaGTTCCTCGCTGAACACAGC +
Preference number: 4 (lower is better)
Translates to: TGLDCDPSSTGTTKSLEVRNLDQ*FLAEHS
Trigger: GCTGTGTTCAGCGAGGAAGCACTGATCCAAGTTCCG...AACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp ACTGGTCTGGACTGTGATCCTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTATCTGGATGACTGCTTaGCCCACTCCGCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: TGLDCDPSSTGTTKSLEVIWMTA*PTPLLD
Trigger: ATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGAT...AACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR GCA 90 bp ACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGTTGGCGATCTGGATGACTaGTTGCCCCACTCCGCTGTT +
Preference number: 4 (lower is better)
Translates to: TVLVLLDRDDFYFLEGRVGDLDD*LPHSAV
Trigger: AACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCC...AACTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTTCTTCTGTGATGACATaGTCAGCCCCCAGACTCTTC +
Preference number: 4 (lower is better)
Translates to: STSKRLFYRTLVCGLVQLSSVMT*SAPRLF
Trigger: GAAGAGTCTGGGGGCTGAGCATGTCATCACAGAAGA...AAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGTGGGTAATTCTTTGTTaGAGTAGACTGTTCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARWVILC*SRLFCV
Trigger: GACACAGAACAGTCTACTGCAACAAAGAATTACCCA...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCACTGTCACTCAGCTTCTaGATATCAGGTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: EKHIKAFVLQDPRLWACALSLSF*ISGLSR
Trigger: CCGAGACAGACCTGATATCCAGAAGCTGAGTGACAG...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp AATGCACGGTTTATCAACGACCTCATGAACATTGAACATTTGGGGCTAGATTTTAGGCTGTGCAGGGATTaGCACCCAGGGTGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: NARFINDLMNIEHLGLDFRLCRD*HPGWQR
Trigger: GCGCTGCCACCCTGGGTGTCAATCCCTGCACAGCCT...AAAATCTAGCCCCAAATGTTCAATGTTCATGAGGTCGTTGATAAACCGTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp ACTGTTCTGTGTCCTGTGGTGGGTTTAACAGCAGCACTCACTCTGCCTGCTAGACCTTCTCGACAGGGATaGCTTCTACTTTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: TVLCPVVGLTAALTLPARPSRQG*LLLFGR
Trigger: CCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGG...TCTAGCAGGCAGAGTGAGTGCTGCTGTTAAACCCACCACAGGACACAGAACAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTCACTCCGCTGTTGGATaGATTCTGGATGACAGAATC +
Preference number: 4 (lower is better)
Translates to: STSKRLFYRTLVCGLVQLHSAVG*ILDDRI
Trigger: GATTCTGTCATCCAGAATGCATCCAACAGCGGAGTG...AAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp GAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTCTGTCACTCAGCTTCTaGATATCAGGTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: ELTSAQCWSFSTGMTSTFLSLSF*ISGLSR
Trigger: CCGAGACAGACCTGATATCCAGAAGCTGAGTGACAG...AAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AGATCTTTATTCTGCTCTTACAGCACCCCACATATCTTCTTTACAGCATTAGTCATCCTCCCCAAGCCCTaGACTGGGCCGCAGGCTACC +
Preference number: 4 (lower is better)
Translates to: RSLFCSYSTPHIFFTALVILPKP*TGPQAT
Trigger: GGTAGCCTGCGGCCCAGTCCAGGGCTTGGGGAGGAT...GACTAATGCTGTAAAGAAGATATGTGGGGTGCTGTAAGAGCAGAATAAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR TCA 90 bp CTTCCACTGGGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAGTGTCTCGGACCACATTaGTGGTTCTTAGGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LPLGQPKASKFEILKNEQCLGPH*WFLGPG
Trigger: CCCTGGGCCTAAGAACCATCAATGTGGTCCGAGACA...CTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAGTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR TCA 90 bp TGCCTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAAACTGGTCTGGACTGTaGTCCTTCTTCCACTGGGAC +
Preference number: 4 (lower is better)
Translates to: CLWLRTTGILSMSPVRRANWSGL*SFFHWD
Trigger: GTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGTT...TGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp CTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCTTTCAGGGTGGTCATTTGCTTTGAGCAAATaGATCGTGAAGCAAATACCA +
Preference number: 4 (lower is better)
Translates to: LLAFALPVPTQALLSGWSFALSK*IVKQIP
Trigger: TGGTATTTGCTTCACGATTCATTTGCTCAAAGCAAA...TGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp TGCCTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAACAGAATCCCCTGGCTaGAGTTGCTCGAAGTCCATC +
Preference number: 4 (lower is better)
Translates to: CLWLRTTGILSMSPVRRATESPG*SCSKSI
Trigger: GATGGACTTCGAGCAACTGCAGCCAGGGGATTCTGT...TGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AGCAAATACCAAAAAGTCACGTCAAGCTCTTCTCTCGGCCTGAATAAAGCTCACTACTGGCCTTTGCACTaGCAGTACCCACCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SKYQKVTSSSSLGLNKAHYWPLH*QYPPRL
Trigger: AAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTA...GTGAGCTTTATTCAGGCCGAGAGAAGAGCTTGACGTGACTTTTTGGTATTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CCA 90 bp CACTGGGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAGGCTCCCCCATAGGTTACCATaGTTCCTCCACGCGCTAACT +
Preference number: 4 (lower is better)
Translates to: HWDNQKPRSLRSLKMSRLPHRLP*FLHALT
Trigger: AGTTAGCGCGTGGAGGAACCATGGTAACCTATGGGG...GAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp AGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTTCACTCCAGCTCTTTTaGGATGATCACATGGTGAGA +
Preference number: 4 (lower is better)
Translates to: STSKRLFYRTLVCGLVQLSLQLF*DDHMVR
Trigger: TCTCACCATGTGATCATCCCAAAAGAGCTGGAGTGA...AAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp AGATCTTTATTCTGCTCTTACAGCACCCCACATATCTTCTTTACAGCATTAGTCTCCCACCAACACAGTTaGGAGCAAGCCGTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSLFCSYSTPHIFFTALVSHQHS*EQAVAG
Trigger: CCCAGCCACGGCTTGCTCTCAACTGTGTTGGTGGGA...GACTAATGCTGTAAAGAAGATATGTGGGGTGCTGTAAGAGCAGAATAAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp ATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACCTCATGAACGCCCGGTCACATTGCTaGCCACCGCTACCACCTGTG +
Preference number: 4 (lower is better)
Translates to: MVITVRLFNARFINDLMNARSHC*PPLPPV
Trigger: CACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGC...GTTCATGAGGTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AGCAAATACCAAAAAGTCACGTCAAGCTCTTCTCTCGGCCTGAATAAAGCTCACATCTGGATGACTGCTTaGCCCACTCCGCTGTTGGAT +
Preference number: 4 (lower is better)
Translates to: SKYQKVTSSSSLGLNKAHIWMTA*PTPLLD
Trigger: ATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGAT...GTGAGCTTTATTCAGGCCGAGAGAAGAGCTTGACGTGACTTTTTGGTATTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp AGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTCACATGGTGAGAATCTaGTTTGAAGATATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: STSKRLFYRTLVCGLVQLHMVRI*FEDMKG
Trigger: GCCCTTCATATCTTCAAAGCAGATTCTCACCATGTG...AAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AGATCTTTATTCTGCTCTTACAGCACCCCACATATCTTCTTTACAGCATTAGTCAGGGCTGCGGCGATCTaGATGACTGCTTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: RSLFCSYSTPHIFFTALVRAAAI*MTACPT
Trigger: AGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCCCT...GACTAATGCTGTAAAGAAGATATGTGGGGTGCTGTAAGAGCAGAATAAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CCA 90 bp CTGGGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAGGCTCTGCTGTCACTCAGCTTCTaGATATCAGGTCTGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LGQPKASKFEILKNEQALLSLSF*ISGLSR
Trigger: CCGAGACAGACCTGATATCCAGAAGCTGAGTGACAG...CAGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp AGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGCTTTGCTTTCAGGGTaGTCAGAAAATGATTACTGG +
Preference number: 4 (lower is better)
Translates to: STSKRLFYRTLVCGLVQLALLSG*SENDYW
Trigger: CCAGTAATCATTTTCTGACCACCCTGAAAGCAAAGC...AAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp AATGCACGGTTTATCAACGACCTCATGAACATTGAACATTTGGGGCTAGATTTTCACCGCTACCACCTGTaGAACACCTTCGTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: NARFINDLMNIEHLGLDFHRYHL*NTFVPS
Trigger: GGAGGGAACGAAGGTGTTGCACAGGTGGTAGCGGTG...AAAATCTAGCCCCAAATGTTCAATGTTCATGAGGTCGTTGATAAACCGTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CTTCCACTGGGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAGATGTCACTCGGAACTTaGATCAGTGCTTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: LPLGQPKASKFEILKNEQMSLGT*ISASSL
Trigger: CAGCGAGGAAGCACTGATCCAAGTTCCGAGTGACAT...CTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAGTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CCA 90 bp CTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGGTTGAGAGCAAGCCGTaGCTGGGGCATGTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LLPLGQPKASKFEILKNEVESKP*LGHVLK
Trigger: TTTAAGGACATGCCCCAGCCACGGCTTGCTCTCAAC...CTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463412.1
3UTR CAA 72 bp TCCTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTaGAGATCCTTAAAAATGAGCAGGCTCTGCAGACAC +
Preference number: 4 (lower is better)
Translates to: SFFHWDNQKPRS*RSLKMSRLCRH
Trigger: GTGTCTGCAGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR TCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTAGGGTGGTCAGAAAATaGTTACTGGGGGAACACATG +
Preference number: 4 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVRVVRK*LLGEHM
Trigger: CATGTGTTCCCCCAGTAATCATTTTCTGACCACCCT...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp GAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTAAAATTGCCTCTGGTTaGGAACCACTGGTATATTGT +
Preference number: 4 (lower is better)
Translates to: ELTSAQCWSFSTGMTSTFKIASG*EPLVYC
Trigger: ACAATATACCAGTGGTTCTCAACCAGAGGCAATTTT...AAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp ACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGTTGGTGAGAATCTGCTTTaGAGATATGAAGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TVLVLLDRDDFYFLEGRVGENLL*RYEGLH
Trigger: ATGAAGCCCTTCATATCTTCAAAGCAGATTCTCACC...AACTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp TTAGTCACTATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACGGGCCGCAGGCTACCTaGGAAGCACATCAAAGCGTT +
Preference number: 4 (lower is better)
Translates to: LVTMVITVRLFNARFINDGPQAT*EAHQSV
Trigger: AACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCC...GTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCATAGTGACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp TGCCTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCACACATGGTGAGAATCTaGTTTGAAGATATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CLWLRTTGILSMSPVRRAHMVRI*FEDMKG
Trigger: GCCCTTCATATCTTCAAAGCAGATTCTCACCATGTG...TGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR GCA 90 bp TTAGTCACTATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACTGGCCTACTGGCCTTTaGACTGCCAGTACCCACCCA +
Preference number: 4 (lower is better)
Translates to: LVTMVITVRLFNARFINDWPTGL*TASTHP
Trigger: TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCA...GTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCATAGTGACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CCA 90 bp AGCAAATACCAAAAAGTCACGTCAAGCTCTTCTCTCGGCCTGAATAAAGCTCACCATATTTATGTCAGATaGATTGATAGGGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: SKYQKVTSSSSLGLNKAHHIYVR*IDRGRQ
Trigger: CTGGCGGCCCCTATCAATCCATCTGACATAAATATG...GTGAGCTTTATTCAGGCCGAGAGAAGAGCTTGACGTGACTTTTTGGTATTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTCATATTTATGTCAGATaGATTGATAGGGGCCGCCAG +
Preference number: 4 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVHIYVR*IDRGRQ
Trigger: CTGGCGGCCCCTATCAATCCATCTGACATAAATATG...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AATGCACGGTTTATCAACGACCTCATGAACATTGAACATTTGGGGCTAGATTTTCCCCATAGGTTACCATaGTTCCTCCACGCGCTAACT +
Preference number: 4 (lower is better)
Translates to: NARFINDLMNIEHLGLDFPHRLP*FLHALT
Trigger: AGTTAGCGCGTGGAGGAACCATGGTAACCTATGGGG...AAAATCTAGCCCCAAATGTTCAATGTTCATGAGGTCGTTGATAAACCGTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp AATGCACGGTTTATCAACGACCTCATGAACATTGAACATTTGGGGCTAGATTTTACCAGTGCACAGTGTTaGTCCTTCTCGACAGGGATG +
Preference number: 4 (lower is better)
Translates to: NARFINDLMNIEHLGLDFTSAQC*SFSTGM
Trigger: CATCCCTGTCGAGAAGGACCAACACTGTGCACTGGT...AAAATCTAGCCCCAAATGTTCAATGTTCATGAGGTCGTTGATAAACCGTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp AGCAAATACCAAAAAGTCACGTCAAGCTCTTCTCTCGGCCTGAATAAAGCTCACGGTGAGAATCTGCTTTaGAGATATGAAGGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SKYQKVTSSSSLGLNKAHGENLL*RYEGLH
Trigger: ATGAAGCCCTTCATATCTTCAAAGCAGATTCTCACC...GTGAGCTTTATTCAGGCCGAGAGAAGAGCTTGACGTGACTTTTTGGTATTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR GCA 90 bp ATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACCTCATGAACTCCCCTGGCTGCAGTTaGTCGAAGTCCATCAACATC +
Preference number: 4 (lower is better)
Translates to: MVITVRLFNARFINDLMNSPGCS*SKSINI
Trigger: GATGTTGATGGACTTCGAGCAACTGCAGCCAGGGGA...GTTCATGAGGTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp ATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACCTCATGAACGATGACAGAATCCCCTaGCTGCAGTTGCTCGAAGTC +
Preference number: 4 (lower is better)
Translates to: MVITVRLFNARFINDLMNDDRIP*LQLLEV
Trigger: GACTTCGAGCAACTGCAGCCAGGGGATTCTGTCATC...GTTCATGAGGTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp ATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACCTCATGAACCTCCTTGAACTGGTCTaGACTGTGATCCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: MVITVRLFNARFINDLMNLLELV*TVILLP
Trigger: TGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAG...GTTCATGAGGTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CCA 90 bp CTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCAGTTATGACTTCTACTTTTTaGAAGGGAGAGTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: LWLRTTGILSMSPVRRAVMTSTF*KGEFRL
Trigger: AAGTCTGAACTCTCCCTTCCAAAAAGTAGAAGTCAT...AACTGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR TCA 90 bp TTAGTCACTATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACAAAATTGCCTCTGGTTaGGAACCACTGGTATATTGT +
Preference number: 4 (lower is better)
Translates to: LVTMVITVRLFNARFINDKIASG*EPLVYC
Trigger: ACAATATACCAGTGGTTCTCAACCAGAGGCAATTTT...GTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCATAGTGACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS CCA 90 bp GGATGCGGAGTAGGAGGAGGCGGCAGGTCCGTGACAGCCAGAAGCTaGGAGCAGCCCCCGCCACTGCCGGGCGGGGGTTCGCACCCGCCA +
Preference number: 5 (lower is better)
Translates to: GCGVGGGGRSVTARS*EQPPPLPGGGSHPP
Trigger: TGGCGGGTGCGAACCCCCGCCCGGCAGTGGCGGGGGCTGCTCCCAGCTTCTGGCTGTCACGGACCTGCCGCCTCCTCCTACTCCGCATCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000474946.5
ENST00000475861.6
ENST00000482610.1
ENST00000484012.5
ENST00000489248.5
ENST00000490529.5
ENST00000493928.1
CDS GCA 90 bp GCCCCCGCCACTGCCGGGCGGGGGTTCGCACCCGCCACAGGGTACTaGAGACCCACATGCTCGCTCCAACCAACACAGAGCCTGACGCCC +
Preference number: 5 (lower is better)
Translates to: APATAGRGFAPATGY*RPTCSLQPTQSLTP
Trigger: GGGCGTCAGGCTCTGTGTTGGTTGGAGCGAGCATGTGGGTCTGCAGTACCCTGTGGCGGGTGCGAACCCCCGCCCGGCAGTGGCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000484012.5
ENST00000493928.1
CDS TCA 90 bp TTGCCTAAGCTTAGACAGCTGTCGTGCCAGGGGATGTGGCCTGGCTaGGGTGTCTGGCCCGGCTCCAGGCATGCCTCCCTCTGCACCCAG +
Preference number: 5 (lower is better)
Translates to: LPKLRQLSCQGMWPG*GVWPGSRHASLCTQ
Trigger: CTGGGTGCAGAGGGAGGCATGCCTGGAGCCGGGCCAGACACCTCAGCCAGGCCACATCCCCTGGCACGACAGCTGTCTAAGCTTAGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS GCA 90 bp TGGTCCTCCCAGCTAAAGACCTGGAGAGCTCTGGCGAGCTGGACCTaGAGGCCCAAGGGACTTACGCTAACTGCCGCAGCAGCTCTGTGG +
Preference number: 5 (lower is better)
Translates to: WSSQLKTWRALASWT*RPKGLTLTAAAALW
Trigger: CCACAGAGCTGCTGCGGCAGTTAGCGTAAGTCCCTTGGGCCTGCAGGTCCAGCTCGCCAGAGCTCTCCAGGTCTTTAGCTGGGAGGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464511.1
CDS-3UTR CAA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCATTCCCACCAACACAGTaGAGAGCAAGCCGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPFPPTQ*RASRGW
Trigger: CCAGCCACGGCTTGCTCTCAACTGTGTTGGTGGGAA...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GGGGCTGTGAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTCCCACCAACACAGTaGAGAGCAAGCCGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: GAVSWPRRMRSHSVRISSFPPTQ*RASRGW
Trigger: CCAGCCACGGCTTGCTCTCAACTGTGTTGGTGGGAA...GGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTCACAGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CAA 90 bp CTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGCTTTCAGGGTGGTCAGTGGGCTTGTGCAGCTaGGGGCCAGGGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LLAFALPVPTQALLSGWSVGLCS*GPGMVA
Trigger: GGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCAC...TGACCACCCTGAAAGCAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGCCCTCGTCTGTGGGCTaGTGCAGCTTGGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQPSSVG*CSLGPG
Trigger: CCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGG...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAATCCCCTGGCTGCAGTaGCTCGAAGTCCATCAACAT +
Preference number: 5 (lower is better)
Translates to: AWGQGWWPTGLCTASTHPIPWLQ*LEVHQH
Trigger: ATGTTGATGGACTTCGAGCAACTGCAGCCAGGGGAT...TGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS GCA 90 bp TCCTGGCTTCAGCCCGGTCACATTGCTGCCCACCGCTACCACCTGTaGAACACCTTCGTTCCCTCCAACAGCAGGCAGTTCAGGAAGGAA +
Preference number: 5 (lower is better)
Translates to: SWLQPGHIAAHRYHL*NTFVPSNSRQFRKE
Trigger: TTCCTTCCTGAACTGCCTGCTGTTGGAGGGAACGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAAGCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 90 bp TTGCTGGAATCACCCAGTCTCCTGGCTTCAGCCCGGTCACATTGCTaGCCACCGCTACCACCTGTGCAACACCTTCGTTCCCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: LLESPSLLASARSHC*PPLPPVQHLRSLQQ
Trigger: CTGTTGGAGGGAACGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAAGCCAGGAGACTGGGTGATTCCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 90 bp GGCTGCGGCGATCTGGATGACTGCTTGCCCCACTCCGCTGTTGGATaGATTCTGGATGACAGAATCCCCTGGCTGCAGTTGCTCGAAGTC +
Preference number: 5 (lower is better)
Translates to: GCGDLDDCLPHSAVG*ILDDRIPWLQLLEV
Trigger: GACTTCGAGCAACTGCAGCCAGGGGATTCTGTCATCCAGAATGCATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000478505.6
ENST00000489248.5
CDS-3UTR CAA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGTTCCCACCAACACAGTaGAGAGCAAGCCGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARFPPTQ*RASRGW
Trigger: CCAGCCACGGCTTGCTCTCAACTGTGTTGGTGGGAA...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGTGGGCTTGTGCAGCTaGGGGCCAGGGATGGTGGCC +
Preference number: 5 (lower is better)
Translates to: EKHIKAFVLQDPRLWACAVGLCS*GPGMVA
Trigger: GGCCACCATCCCTGGCCCCAAGCTGCACAAGCCCAC...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS GCA 90 bp CATTTGCTGGAATCACCCAGTCTCCTGGCTTCAGCCCGGTCACATTaGTGCCCACCGCTACCACCTGTGCAACACCTTCGTTCCCTCCAA +
Preference number: 5 (lower is better)
Translates to: HLLESPSLLASARSH*CPPLPPVQHLRSLQ
Trigger: TTGGAGGGAACGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAAGCCAGGAGACTGGGTGATTCCAGCAAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS CCA 90 bp TCTCGGACCACATTGATGGTTCTTAGGCCCAGGGCTGCGGCGATCTaGATGACTGCTTGCCCCACTCCGCTGTTGGATGCATTCTGGATG +
Preference number: 5 (lower is better)
Translates to: SRTTLMVLRPRAAAI*MTACPTPLLDAFWM
Trigger: CATCCAGAATGCATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCCCTGGGCCTAAGAACCATCAATGTGGTCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000478505.6
CDS-3UTR CAA 90 bp GAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTGAACTGTCCAGGAACGGGGCATaGCCTAAGCTTAGACAGCTG +
Preference number: 5 (lower is better)
Translates to: ELASADEIAQCEDQLLELSRNGA*PKLRQL
Trigger: CAGCTGTCTAAGCTTAGGCAATGCCCCGTTCCTGGA...CAGTTCAAGGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS TCA 90 bp GCAGTTGCTCGAAGTCCATCAACATCCTGTAGGCTGTGCAGGGATTaGCACCCAGGGTGGCAGCGCTCTGAAGAGGGATGTCACTCGGAA +
Preference number: 5 (lower is better)
Translates to: AVARSPSTSCRLCRD*HPGWQRSEEGCHSE
Trigger: TTCCGAGTGACATCCCTCTTCAGAGCGCTGCCACCCTGGGTGTCAATCCCTGCACAGCCTACAGGATGTTGATGGACTTCGAGCAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000463412.1
ENST00000473030.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 90 bp GCAACAGGAGACCCGTTCACGTCCTCCGTGAATGTAATGGCGCCATaGAACTCGAGGGGATGCCACTGTCCTCAATCAACAGATCCCAGC +
Preference number: 5 (lower is better)
Translates to: ATGDPFTSSVNVMAP*NSRGCHCPQSTDPS
Trigger: GCTGGGATCTGTTGATTGAGGACAGTGGCATCCCCTCGAGTTGCATGGCGCCATTACATTCACGGAGGACGTGAACGGGTCTCCTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493928.1
CDS-3UTR CAA 90 bp TGTGCAGCTTGGGGCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCTTCCTAAACCAGCATTaGCTGGAATCACCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: CAAWGQGWWPTGLCTASTFLNQH*LESPSL
Trigger: GAGACTGGGTGATTCCAGCAAATGCTGGTTTAGGAA...GGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGCCCCAAGCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGGATGTCACTCGGAACTaGGATCAGTGCTTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARDVTRN*DQCFLA
Trigger: AGCGAGGAAGCACTGATCCAAGTTCCGAGTGACATC...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GAGCTGGCCTCGGCGGATGAGATCGCACAGTGTGAGGATCAGCTCCTTGAACTGGATGTCACTCGGAACTaGGATCAGTGCTTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: ELASADEIAQCEDQLLELDVTRN*DQCFLA
Trigger: AGCGAGGAAGCACTGATCCAAGTTCCGAGTGACATC...CAGTTCAAGGAGCTGATCCTCACACTGTGCGATCTCATCCGCCGAGGCCAGCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CAA 90 bp GAAGCATACCCCTGTCCCTGGGGCCTAGGGCAAGATCTTTATTCTGCTCTTACATTGAGTTCGACGACCTaGGCTGGATCCCCGTGGTGC +
Preference number: 5 (lower is better)
Translates to: EAYPCPWGLGQDLYSALTLSSTT*AGSPWC
Trigger: GCACCACGGGGATCCAGCCAAGGTCGTCGAACTCAA...TGTAAGAGCAGAATAAAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CAA 90 bp GCCTCTTGGTGCTGTGAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGTTTATGTCAGATGGATaGATAGGGGCCGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: ASWCCELTSAQCWSFSTGFMSDG*IGAASI
Trigger: GATGCTGGCGGCCCCTATCAATCCATCTGACATAAA...CCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTCACAGCACCAAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTTCAGCCCGGTCACATaGCTGCCCACCGCTACCACC +
Preference number: 5 (lower is better)
Translates to: ELTSAQCWSFSTGMTSTFFSPVT*LPTATT
Trigger: GGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAA...AAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTACGGTTTCGACGACCTaGGCTGGATCCCCGTGGTGC +
Preference number: 5 (lower is better)
Translates to: ELTSAQCWSFSTGMTSTFTVSTT*AGSPWC
Trigger: GCACCACGGGGATCCAGCCAAGGTCGTCGAAACCGT...AAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373791.7
CDS TCA 90 bp TCTGAAGAGGGATGTCACTCGGAACTTGGATCAGTGCTTCCTCGCTaGACACAGCCTCGGTCCGCCAGGTTCCTAAACCAGCATTTGCTG +
Preference number: 5 (lower is better)
Translates to: SEEGCHSELGSVLPR*TQPRSARFLNQHLL
Trigger: CAGCAAATGCTGGTTTAGGAACCTGGCGGACCGAGGCTGTGTTCAGCGAGGAAGCACTGATCCAAGTTCCGAGTGACATCCCTCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000463412.1
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 90 bp CCTGGTTATACCTCGTTCACGTCCTCCGTGAATGTAATGGCGCCATaGAACTCGAGGGGATGCCACTGTCCTCAATCAACAGATCCCAGC +
Preference number: 5 (lower is better)
Translates to: PGYTSFTSSVNVMAP*NSRGCHCPQSTDPS
Trigger: GCTGGGATCTGTTGATTGAGGACAGTGGCATCCCCTCGAGTTGCATGGCGCCATTACATTCACGGAGGACGTGAACGAGGTATAACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463052.5
ENST00000464915.1
ENST00000489248.5
CDS-3UTR CAA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGTTTATGTCAGATGGATaGATAGGGGCCGCCAGCATC +
Preference number: 5 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQFMSDG*IGAASI
Trigger: GATGCTGGCGGCCCCTATCAATCCATCTGACATAAA...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp AAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGGTTCCTAAACCAGCATTaGCTGGAATCACCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: KRLFYRTLVCGLVQLGARFLNQH*LESPSL
Trigger: GAGACTGGGTGATTCCAGCAAATGCTGGTTTAGGAA...CCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GAAGCATACCCCTGTCCCTGGGGCCTAGGGCAAGATCTTTATTCTGCTCTTACAGATCTGGATGACTGCTaGCCCCACTCCGCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: EAYPCPWGLGQDLYSALTDLDDC*PHSAVG
Trigger: TCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATC...TGTAAGAGCAGAATAAAGATCTTGCCCTAGGCCCCAGGGACAGGGGTATGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CAA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGATCTGGATGACTGCTaGCCCCACTCCGCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: EKHIKAFVLQDPRLWACADLDDC*PHSAVG
Trigger: TCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATC...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GCACAGTGTGAGGATCAGCTCCTTGAACTGGTCTGGACTGTGATCCTTCTTCCAGATCTGGATGACTGCTaGCCCCACTCCGCTGTTGGA +
Preference number: 5 (lower is better)
Translates to: AQCEDQLLELVWTVILLPDLDDC*PHSAVG
Trigger: TCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATC...TGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAGCTGATCCTCACACTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CAA 90 bp AGCAAATACCAAAAAGTCACGTCAAGCTCTTCTCTCGGCCTGAATAAAGCTCACCCCTCGTCTGTGGGCTaGTGCAGCTTGGGGCCAGGG +
Preference number: 5 (lower is better)
Translates to: SKYQKVTSSSSLGLNKAHPSSVG*CSLGPG
Trigger: CCCTGGCCCCAAGCTGCACAAGCCCACAGACGAGGG...GTGAGCTTTATTCAGGCCGAGAGAAGAGCTTGACGTGACTTTTTGGTATTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263702.11
CDS-3UTR CAA 90 bp AAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGGGCCAGTTACCTAGGTTGACCTaGAACTCCTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: KAFVLQDPRLWACAAWGQLPRLT*NSWAQV
Trigger: CACTTGAGCCCAGGAGTTCAAGGTCAACCTAGGTAA...CTGGCCCCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp TGCCTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCATTCAGCCCGGTCACATaGCTGCCCACCGCTACCACC +
Preference number: 5 (lower is better)
Translates to: CLWLRTTGILSMSPVRRAFSPVT*LPTATT
Trigger: GGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAA...TGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp ACTGTTCTGTGTCCTGTGGTGGGTTTAACAGCAGCACTCACTCTGCCTGCTAGATGCCCCACTCCGCTGTaGGATGCATTCTGGATGACA +
Preference number: 5 (lower is better)
Translates to: TVLCPVVGLTAALTLPARCPTPL*DAFWMT
Trigger: TGTCATCCAGAATGCATCCAACAGCGGAGTGGGGCA...TCTAGCAGGCAGAGTGAGTGCTGCTGTTAAACCCACCACAGGACACAGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp ACTGTTCTGTGTCCTGTGGTGGGTTTAACAGCAGCACTCACTCTGCCTGCTAGACTGTCTCGGACCACATaGATGGTTCTTAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TVLCPVVGLTAALTLPARLSRTT*MVLRPR
Trigger: CCTGGGCCTAAGAACCATCAATGTGGTCCGAGACAG...TCTAGCAGGCAGAGTGAGTGCTGCTGTTAAACCCACCACAGGACACAGAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp AGCCCTGGACTGGGCCGCAGGCTACCTGAGAAGCACATCAAAGCGTTTGTTCTATTACCTAGGTTGACCTaGAACTCCTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: SPGLGRRLPEKHIKAFVLLPRLT*NSWAQV
Trigger: CACTTGAGCCCAGGAGTTCAAGGTCAACCTAGGTAA...TAGAACAAACGCTTTGATGTGCTTCTCAGGTAGCCTGCGGCCCAGTCCAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS CCA 90 bp GGCCAGTACCCTGGGGACTGGCACAGTTATACTTGCTGTGTAAGGTaGGCATTAGCTAGCTCTGCTGAGATATCTTTCCTGCGTTCCACA +
Preference number: 5 (lower is better)
Translates to: GQYPGDWHSYTCCVR*ALASSAEISFLRST
Trigger: TGTGGAACGCAGGAAAGATATCTCAGCAGAGCTAGCTAATGCCCACCTTACACAGCAAGTATAACTGTGCCAGTCCCCAGGGTACTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464915.1
CDS-3UTR CAA 90 bp GCCAGGGATGGTGGCCTACTGGCCTTTGCACTGCCAGTACCCACCCAGGCTTTGGAATCCGTAGTTTCCTaGGATCATATTTATGTCAGA +
Preference number: 5 (lower is better)
Translates to: ARDGGLLAFALPVPTQALESVVS*DHIYVR
Trigger: TCTGACATAAATATGATCCAAGGAAACTACGGATTC...CAAAGCCTGGGTGGGTACTGGCAGTGCAAAGGCCAGTAGGCCACCATCCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp ACTGTTCTGTGTCCTGTGGTGGGTTTAACAGCAGCACTCACTCTGCCTGCTAGAGATGTCACTCGGAACTaGGATCAGTGCTTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: TVLCPVVGLTAALTLPARDVTRN*DQCFLA
Trigger: AGCGAGGAAGCACTGATCCAAGTTCCGAGTGACATC...TCTAGCAGGCAGAGTGAGTGCTGCTGTTAAACCCACCACAGGACACAGAACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GCACAGTGTGAGGATCAGCTCCTTGAACTGGTCTGGACTGTGATCCTTCTTCCAATCCCCTGGCTGCAGTaGCTCGAAGTCCATCAACAT +
Preference number: 5 (lower is better)
Translates to: AQCEDQLLELVWTVILLPIPWLQ*LEVHQH
Trigger: ATGTTGATGGACTTCGAGCAACTGCAGCCAGGGGAT...TGGAAGAAGGATCACAGTCCAGACCAGTTCAAGGAGCTGATCCTCACACTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CAA 90 bp ACTGGTCTGGACTGTGATCCTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTCTGTCTCGGACCACATaGATGGTTCTTAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: TGLDCDPSSTGTTKSLEVLSRTT*MVLRPR
Trigger: CCTGGGCCTAAGAACCATCAATGTGGTCCGAGACAG...AACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAGGATCACAGTCCAGACCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CAA 90 bp GCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGATCCCCTGGCTGCAGTaGCTCGAAGTCCATCAACAT +
Preference number: 5 (lower is better)
Translates to: AQCWSFSTGMTSTFWKGEIPWLQ*LEVHQH
Trigger: ATGTTGATGGACTTCGAGCAACTGCAGCCAGGGGAT...CTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp ACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGTTTGCCCCACTCCGCTGTaGGATGCATTCTGGATGACA +
Preference number: 5 (lower is better)
Translates to: TVLVLLDRDDFYFLEGRVCPTPL*DAFWMT
Trigger: TGTCATCCAGAATGCATCCAACAGCGGAGTGGGGCA...AACTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp TGCCTCTGGTTGAGAACCACTGGTATATTGTCTATGTCTCCAGTTAGAAGGGCACTGTCTCGGACCACATaGATGGTTCTTAGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CLWLRTTGILSMSPVRRALSRTT*MVLRPR
Trigger: CCTGGGCCTAAGAACCATCAATGTGGTCCGAGACAG...TGCCCTTCTAACTGGAGACATAGACAATATACCAGTGGTTCTCAACCAGAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GAGCTGACCAGTGCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTAGCACATCAAAGCGTTaGTTCTACAGGACCCTCGTC +
Preference number: 5 (lower is better)
Translates to: ELTSAQCWSFSTGMTSTFSTSKR*FYRTLV
Trigger: GACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCT...AAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS GCA 90 bp CCCATGTCACTCCAGCTCTTTTGGGATGATCACATGGTGAGAATCTaGTTTGAAGATATGAAGGGCTTCATGGAGGCTTCCAAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PMSLQLFWDDHMVRI*FEDMKGFMEASKAD
Trigger: GTCTGCCTTGGAAGCCTCCATGAAGCCCTTCATATCTTCAAAGCAGATTCTCACCATGTGATCATCCCAAAAGAGCTGGAGTGACATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000473030.5
ENST00000475773.5
ENST00000483435.5
CDS CCA 90 bp TCTGTTTTGTGGCAGGTCCTGCTGCAGACACAAACTACAAGTCCGTaGGAGAGACACTACATGGTTCTCATTTGGGGTACATTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SVLWQVLLQTQTTSP*ERHYMVLIWGTFLE
Trigger: TTCCAGGAATGTACCCCAAATGAGAACCATGTAGTGTCTCTCCCACGGACTTGTAGTTTGTGTCTGCAGCAGGACCTGCCACAAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS GCA 90 bp AAGTTTTTCATTTCGGGCCTTCTTAGCTCCTCTTCTGTGATGACATaGTCAGCCCCCAGACTCTTCAGTCTGTCACTCAGCTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: KFFISGLLSSSSVMT*SAPRLFSLSLSFWI
Trigger: TATCCAGAAGCTGAGTGACAGACTGAAGAGTCTGGGGGCTGAGCATGTCATCACAGAAGAGGAGCTAAGAAGGCCCGAAATGAAAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000464511.1
ENST00000473030.5
ENST00000475773.5
ENST00000478505.6
ENST00000490529.5
CDS CCA 90 bp GGGAGAGACACTACATGGTTCTCATTTGGGGTACATTCCTGGAAATaGAGGAGTGTTCATCAGAGCTGTACCAGTTCCTTACAACGCAGT +
Preference number: 5 (lower is better)
Translates to: GRDTTWFSFGVHSWK*RSVHQSCTSSLQRS
Trigger: ACTGCGTTGTAAGGAACTGGTACAGCTCTGATGAACACTCCTCCATTTCCAGGAATGTACCCCAAATGAGAACCATGTAGTGTCTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS CCA 90 bp GTCCGTGGGAGAGACACTACATGGTTCTCATTTGGGGTACATTCCTaGAAATGGAGGAGTGTTCATCAGAGCTGTACCAGTTCCTTACAA +
Preference number: 5 (lower is better)
Translates to: VRGRDTTWFSFGVHS*KWRSVHQSCTSSLQ
Trigger: TTGTAAGGAACTGGTACAGCTCTGATGAACACTCCTCCATTTCCAGGAATGTACCCCAAATGAGAACCATGTAGTGTCTCTCCCACGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS CCA 90 bp TCCTGCTGCAGACACAAACTACAAGTCCGTGGGAGAGACACTACATaGTTCTCATTTGGGGTACATTCCTGGAAATGGAGGAGTGTTCAT +
Preference number: 5 (lower is better)
Translates to: SCCRHKLQVRGRDTT*FSFGVHSWKWRSVH
Trigger: ATGAACACTCCTCCATTTCCAGGAATGTACCCCAAATGAGAACCATGTAGTGTCTCTCCCACGGACTTGTAGTTTGTGTCTGCAGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS-3UTR CAA 90 bp CACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGCTTGGCAAAAGCCTCGAAGTTaGAGATCCTTAAAAATGAGC +
Preference number: 5 (lower is better)
Translates to: HIKAFVLQDPRLWACAAWQKPRS*RSLKMS
Trigger: GCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTG...CCAAGCTGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCAGATGACTTCTACTTTTaGGAAGGGAGAGTTCAGACT +
Preference number: 5 (lower is better)
Translates to: EKHIKAFVLQDPRLWACADDFYF*EGRVQT
Trigger: AGTCTGAACTCTCCCTTCCAAAAAGTAGAAGTCATC...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS CCA 90 bp ACACAAACTACAAGTCCGTGGGAGAGACACTACATGGTTCTCATTTaGGGTACATTCCTGGAAATGGAGGAGTGTTCATCAGAGCTGTAC +
Preference number: 5 (lower is better)
Translates to: TQTTSPWERHYMVLI*GTFLEMEECSSELY
Trigger: GTACAGCTCTGATGAACACTCCTCCATTTCCAGGAATGTACCCCAAATGAGAACCATGTAGTGTCTCTCCCACGGACTTGTAGTTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS-3UTR CAA 90 bp ATCCTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATTGCCCCACTCCGCTGTaGGATGCATTCTGGATGACA +
Preference number: 5 (lower is better)
Translates to: ILLPLGQPKASKFEILKNCPTPL*DAFWMT
Trigger: TGTCATCCAGAATGCATCCAACAGCGGAGTGGGGCA...ATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CAA 90 bp GAGAAGCACATCAAAGCGTTTGTTCTACAGGACCCTCGTCTGTGGGCTTGTGCACAAAAGCCTCGAAGTTaGAGATCCTTAAAAATGAGC +
Preference number: 5 (lower is better)
Translates to: EKHIKAFVLQDPRLWACAQKPRS*RSLKMS
Trigger: GCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTG...TGCACAAGCCCACAGACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS CCA 90 bp GAAATGACAGCTGTTATCAGTTGTAGGAATATCCAAGGAAACCTCTaGAACAATTCCCTGGTTATACCTTCGACGACCTTGGCTGGATCC +
Preference number: 5 (lower is better)
Translates to: EMTAVISCRNIQGNL*NNSLVIPSTTLAGS
Trigger: GGATCCAGCCAAGGTCGTCGAAGGTATAACCAGGGAATTGTTCCAGAGGTTTCCTTGGATATTCCTACAACTGATAACAGCTGTCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474946.5
ENST00000475861.6
CDS-3UTR CAA 90 bp AATGCACGGTTTATCAACGACCTCATGAACATTGAACATTTGGGGCTAGATTTTGACCAGTGCACAGTGTaGGTCCTTCTCGACAGGGAT +
Preference number: 5 (lower is better)
Translates to: NARFINDLMNIEHLGLDFDQCTV*VLLDRD
Trigger: ATCCCTGTCGAGAAGGACCAACACTGTGCACTGGTC...AAAATCTAGCCCCAAATGTTCAATGTTCATGAGGTCGTTGATAAACCGTGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS CCA 90 bp GAAATGACAGCTGTTATCAGTTGTAGGAATATCCAAGGAAACCTCTaGAACAATTCCCTGGTTATACCTTGGCTGTGTGACCTTGGACGA +
Preference number: 5 (lower is better)
Translates to: EMTAVISCRNIQGNL*NNSLVIPWLCDLGR
Trigger: TCGTCCAAGGTCACACAGCCAAGGTATAACCAGGGAATTGTTCCAGAGGTTTCCTTGGATATTCCTACAACTGATAACAGCTGTCATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482610.1
CDS-3UTR CAA 90 bp GCACAGTGTTGGTCCTTCTCGACAGGGATGACTTCTACTTTTTGGAAGGGAGAGGAATCCGTAGTTTCCTaGGATCATATTTATGTCAGA +
Preference number: 5 (lower is better)
Translates to: AQCWSFSTGMTSTFWKGEESVVS*DHIYVR
Trigger: TCTGACATAAATATGATCCAAGGAAACTACGGATTC...CTCTCCCTTCCAAAAAGTAGAAGTCATCCCTGTCGAGAAGGACCAACACTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp ATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACCTCATGAACAGCACATCAAAGCGTTaGTTCTACAGGACCCTCGTC +
Preference number: 5 (lower is better)
Translates to: MVITVRLFNARFINDLMNSTSKR*FYRTLV
Trigger: GACGAGGGTCCTGTAGAACAAACGCTTTGATGTGCT...GTTCATGAGGTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS-3UTR CAA 90 bp ATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACCTCATGAACGCTAGCTCCAGGTTCTaGAGTCTAAGCACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: MVITVRLFNARFINDLMNASSRF*SLSTKP
Trigger: TGGCTTTGTGCTTAGACTCAAGAACCTGGAGCTAGC...GTTCATGAGGTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373791.7
CDS-3UTR CAA 90 bp CTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTTGAGATCCTTAAAAATGAGCAAAAGCCTCGAAGTTaGAGATCCTTAAAAATGAGC +
Preference number: 5 (lower is better)
Translates to: LLPLGQPKASKFEILKNEQKPRS*RSLKMS
Trigger: GCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTG...CTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS-3UTR CAA 90 bp ATGGTAATTACTGTGAGATTGTTTAATGCACGGTTTATCAACGACCTCATGAACGATGACTTCTACTTTTaGGAAGGGAGAGTTCAGACT +
Preference number: 5 (lower is better)
Translates to: MVITVRLFNARFINDLMNDDFYF*EGRVQT
Trigger: AGTCTGAACTCTCCCTTCCAAAAAGTAGAAGTCATC...GTTCATGAGGTCGTTGATAAACCGTGCATTAAACAATCTCACAGTAATTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263702.11
ENST00000373791.7
CDS GCA 72 bp ATAGACAAGCGCCCGGACCCGGGCAGGCTCGGCGGATaGGGAGTAGGAGGAGGCGGCAGGTCCGTGACAGCC +
Preference number: 6 (lower is better)
Translates to: IDKRPDPGRLGG*GVGGGGRSVTA
Trigger: GGCTGTCACGGACCTGCCGCCTCCTCCTACTCCGCATCCGCCGAGCCTGCCCGGGTCCGGGCGCTTGTCTAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000474946.5
ENST00000475861.6
ENST00000482610.1
ENST00000484012.5
ENST00000489248.5
ENST00000490529.5
ENST00000493928.1
CDS TCA 72 bp CTTAGACAGCTGTCGTGCCAGGGGATGTGGCCTGGCTaGGGTGTCTGGCCCGGCTCCAGGCATGCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LRQLSCQGMWPG*GVWPGSRHASL
Trigger: GAGGGAGGCATGCCTGGAGCCGGGCCAGACACCTCAGCCAGGCCACATCCCCTGGCACGACAGCTGTCTAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463412.1
CDS GCA 72 bp ACTGCCGGGCGGGGGTTCGCACCCGCCACAGGGTACTaGAGACCCACATGCTCGCTCCAACCAACACAGAGC +
Preference number: 6 (lower is better)
Translates to: TAGRGFAPATGY*RPTCSLQPTQS
Trigger: GCTCTGTGTTGGTTGGAGCGAGCATGTGGGTCTGCAGTACCCTGTGGCGGGTGCGAACCCCCGCCCGGCAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263702.11
ENST00000484012.5
ENST00000493928.1
CDS GCA 72 bp GGGTTCGCACCCGCCACAGGGTACTGCAGACCCACATaGTCGCTCCAACCAACACAGAGCCTGACGCCCCGG +
Preference number: 6 (lower is better)
Translates to: GFAPATGYCRPT*SLQPTQSLTPR
Trigger: CCGGGGCGTCAGGCTCTGTGTTGGTTGGAGCGAGCATGTGGGTCTGCAGTACCCTGTGGCGGGTGCGAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484012.5
ENST00000493928.1
CDS CAA 90 bp GACACCCAGGGTGGCAGCGCTCTGAAGAGGGATGTCACTCGGAACTaGGATCAGTGCTTCCTCGCTGAACACAGCCTCGGTCCGCCAGGT +
Preference number: 6 (lower is better)
Translates to: DTQGGSALKRDVTRN*DQCFLAEHSLGPPG
Trigger: ACCTGGCGGACCGAGGCTGTGTTCAGCGAGGAAGCACTGATCCAAGTTCCGAGTGACATCCCTCTTCAGAGCGCTGCCACCCTGGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000463412.1
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS CAA 90 bp CCCAGGGCTGCGGCGATCTGGATGACTGCTTGCCCCACTCCGCTGTaGGATGCATTCTGGATGACAGAATCCCCTGGCTGCAGTTGCTCG +
Preference number: 6 (lower is better)
Translates to: PRAAAIWMTACPTPL*DAFWMTESPGCSCS
Trigger: CGAGCAACTGCAGCCAGGGGATTCTGTCATCCAGAATGCATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000478505.6
ENST00000489248.5
CDS GCA 72 bp CAGCCCGGTCACATTGCTGCCCACCGCTACCACCTGTaGAACACCTTCGTTCCCTCCAACAGCAGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: QPGHIAAHRYHL*NTFVPSNSRQF
Trigger: GAACTGCCTGCTGTTGGAGGGAACGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000464915.1
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 72 bp TCACCCAGTCTCCTGGCTTCAGCCCGGTCACATTGCTaGCCACCGCTACCACCTGTGCAACACCTTCGTTCC +
Preference number: 6 (lower is better)
Translates to: SPSLLASARSHC*PPLPPVQHLRS
Trigger: GGAACGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAAGCCAGGAGACTGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 72 bp CAGCTAAAGACCTGGAGAGCTCTGGCGAGCTGGACCTaGAGGCCCAAGGGACTTACGCTAACTGCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: QLKTWRALASWT*RPKGLTLTAAA
Trigger: TGCTGCGGCAGTTAGCGTAAGTCCCTTGGGCCTGCAGGTCCAGCTCGCCAGAGCTCTCCAGGTCTTTAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464511.1
CDS CCA 72 bp TGTGTGCCCAGGAATTACGGTTTCGACGACCTTGGCTaGATCCCCGTGGTGCCCATAGACAAGCGCCCGGAC +
Preference number: 6 (lower is better)
Translates to: CVPRNYGFDDLG*IPVVPIDKRPD
Trigger: GTCCGGGCGCTTGTCTATGGGCACCACGGGGATCCAGCCAAGGTCGTCGAAACCGTAATTCCTGGGCACACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373791.7
CDS CAA 72 bp GGAATCACCCAGTCTCCTGGCTTCAGCCCGGTCACATaGCTGCCCACCGCTACCACCTGTGCAACACCTTCG +
Preference number: 6 (lower is better)
Translates to: GITQSPGFSPVT*LPTATTCATPS
Trigger: CGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAAGCCAGGAGACTGGGTGATTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 72 bp GAATCACCCAGTCTCCTGGCTTCAGCCCGGTCACATTaGTGCCCACCGCTACCACCTGTGCAACACCTTCGT +
Preference number: 6 (lower is better)
Translates to: ESPSLLASARSH*CPPLPPVQHLR
Trigger: ACGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAAGCCAGGAGACTGGGTGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 72 bp CTTAGGCCCAGGGCTGCGGCGATCTGGATGACTGCTTaGCCCACTCCGCTGTTGGATGCATTCTGGATGACA +
Preference number: 6 (lower is better)
Translates to: LRPRAAAIWMTA*PTPLLDAFWMT
Trigger: TGTCATCCAGAATGCATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCCCTGGGCCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000478505.6
ENST00000489248.5
CDS CCA 72 bp CCTCTTCTGCCTCAGTTTTCATTCGACGACCTTGGCTaGATCCCCGTGGTGCCCATAGACAAGCGCCCGGAC +
Preference number: 6 (lower is better)
Translates to: PLLPQFSFDDLG*IPVVPIDKRPD
Trigger: GTCCGGGCGCTTGTCTATGGGCACCACGGGGATCCAGCCAAGGTCGTCGAATGAAAACTGAGGCAGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482610.1
CDS CAA 72 bp GCGGCGATCTGGATGACTGCTTGCCCCACTCCGCTGTaGGATGCATTCTGGATGACAGAATCCCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: AAIWMTACPTPL*DAFWMTESPGC
Trigger: GCAGCCAGGGGATTCTGTCATCCAGAATGCATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000478505.6
ENST00000489248.5
CDS CAA 90 bp GCATTTGCTGGAATCACCCAGTCTCCTGGCTTCAGCCCGGTCACATaGCTGCCCACCGCTACCACCTGTGCAACACCTTCGTTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: AFAGITQSPGFSPVT*LPTATTCATPSFPP
Trigger: TGGAGGGAACGAAGGTGTTGCACAGGTGGTAGCGGTGGGCAGCAATGTGACCGGGCTGAAGCCAGGAGACTGGGTGATTCCAGCAAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS CAA 90 bp GTGCTGACCTGGACTTGGCTCGAACTGGCGATGGGACTCAGTCACTaGATGGTCCTCCCAGCTAAAGACCTGGAGAGCTCTGGCGAGCTG +
Preference number: 6 (lower is better)
Translates to: VLTWTWLELAMGLSH*MVLPAKDLESSGEL
Trigger: CAGCTCGCCAGAGCTCTCCAGGTCTTTAGCTGGGAGGACCATCAAGTGACTGAGTCCCATCGCCAGTTCGAGCCAAGTCCAGGTCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464511.1
CDS TCA 72 bp GCTGTGCAGGGATTGACACCCAGGGTGGCAGCGCTCTaGAGAGGGATGTCACTCGGAACTTGGATCAGTGCT +
Preference number: 6 (lower is better)
Translates to: AVQGLTPRVAAL*RGMSLGTWISA
Trigger: AGCACTGATCCAAGTTCCGAGTGACATCCCTCTTCAGAGCGCTGCCACCCTGGGTGTCAATCCCTGCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000463412.1
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS GCA 72 bp GCTCTGAAGAGGGATGTCACTCGGAACTTGGATCAGTaGTTCCTCGCTGAACACAGCCTCGGTCCGCCAGGT +
Preference number: 6 (lower is better)
Translates to: ALKRDVTRNLDQ*FLAEHSLGPPG
Trigger: ACCTGGCGGACCGAGGCTGTGTTCAGCGAGGAAGCACTGATCCAAGTTCCGAGTGACATCCCTCTTCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000463412.1
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS CCA 72 bp ACATTGATGGTTCTTAGGCCCAGGGCTGCGGCGATCTaGATGACTGCTTGCCCCACTCCGCTGTTGGATGCA +
Preference number: 6 (lower is better)
Translates to: TLMVLRPRAAAI*MTACPTPLLDA
Trigger: TGCATCCAACAGCGGAGTGGGGCAAGCAGTCATCCAGATCGCCGCAGCCCTGGGCCTAAGAACCATCAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000478505.6
ENST00000489248.5
CDS CCA 72 bp GAACAATTCCCTGGTTATACCTTCGACGACCTTGGCTaGATCCCCGTGGTGCCCATAGACAAGCGCCCGGAC +
Preference number: 6 (lower is better)
Translates to: EQFPGYTFDDLG*IPVVPIDKRPD
Trigger: GTCCGGGCGCTTGTCTATGGGCACCACGGGGATCCAGCCAAGGTCGTCGAAGGTATAACCAGGGAATTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474946.5
ENST00000475861.6
CDS CAA 72 bp GGTGGCAGCGCTCTGAAGAGGGATGTCACTCGGAACTaGGATCAGTGCTTCCTCGCTGAACACAGCCTCGGT +
Preference number: 6 (lower is better)
Translates to: GGSALKRDVTRN*DQCFLAEHSLG
Trigger: ACCGAGGCTGTGTTCAGCGAGGAAGCACTGATCCAAGTTCCGAGTGACATCCCTCTTCAGAGCGCTGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000463412.1
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS TCA 72 bp GGATGTCACTCGGAACTTGGATCAGTGCTTCCTCGCTaGACACAGCCTCGGTCCGCCAGGTTCCTAAACCAG +
Preference number: 6 (lower is better)
Translates to: GCHSELGSVLPR*TQPRSARFLNQ
Trigger: CTGGTTTAGGAACCTGGCGGACCGAGGCTGTGTTCAGCGAGGAAGCACTGATCCAAGTTCCGAGTGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000463412.1
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS TCA 72 bp CGAAGTCCATCAACATCCTGTAGGCTGTGCAGGGATTaGCACCCAGGGTGGCAGCGCTCTGAAGAGGGATGT +
Preference number: 6 (lower is better)
Translates to: RSPSTSCRLCRD*HPGWQRSEEGC
Trigger: ACATCCCTCTTCAGAGCGCTGCCACCCTGGGTGTCAATCCCTGCACAGCCTACAGGATGTTGATGGACTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000463412.1
ENST00000473030.5
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000489248.5
ENST00000490529.5
CDS TCA 72 bp CAGATCCCAGCCTGGATAAGGTCACAATGGCTCCTTTaGGGCCAAGGCTGTACACTCGACGACCTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: QIPAWIRSQWLL*GQGCTLDDLGW
Trigger: CCAGCCAAGGTCGTCGAGTGTACAGCCTTGGCCTCAAAGGAGCCATTGTGACCTTATCCAGGCTGGGATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463052.5
ENST00000489248.5
ENST00000493928.1
CDS CCA 72 bp GAGCAAGCCGTGGCTGGGGCATGTCTAGGCATGTTGTaGGGTGGAGGTTCTGGAAGGTTAAGAGGCTTTGAG +
Preference number: 6 (lower is better)
Translates to: EQAVAGACLGML*GGGSGRLRGFE
Trigger: CTCAAAGCCTCTTAACCTTCCAGAACCTCCACCCCACAACATGCCTAGACATGCCCCAGCCACGGCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453185.5
CDS CCA 72 bp CTTTTCCCACCAACACAGTTGAGAGCAAGCCGTGGCTaGGGCATGTCTAGGCATGTTGTGGGGTGGAGGTTC +
Preference number: 6 (lower is better)
Translates to: LFPPTQLRASRG*GMSRHVVGWRF
Trigger: GAACCTCCACCCCACAACATGCCTAGACATGCCCCAGCCACGGCTTGCTCTCAACTGTGTTGGTGGGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453185.5
CDS CAA 72 bp CTCAGCTTCTGGATATCAGGTCTGTCTCGGACCACATaGATGGTTCTTAGGCCCAGGGCTGCGGCGATCTGG +
Preference number: 6 (lower is better)
Translates to: LSFWISGLSRTT*MVLRPRAAAIW
Trigger: CCAGATCGCCGCAGCCCTGGGCCTAAGAACCATCAATGTGGTCCGAGACAGACCTGATATCCAGAAGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000475773.5
ENST00000478505.6
CDS TCA 72 bp TCAGCTTCTGGATATCAGGTCTGTCTCGGACCACATTaGTGGTTCTTAGGCCCAGGGCTGCGGCGATCTGGA +
Preference number: 6 (lower is better)
Translates to: SASGYQVCLGPH*WFLGPGLRRSG
Trigger: TCCAGATCGCCGCAGCCCTGGGCCTAAGAACCATCAATGTGGTCCGAGACAGACCTGATATCCAGAAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000475773.5
ENST00000478505.6
CDS GCA 72 bp GACCCGTTCACGTCCTCCGTGAATGTAATGGCGCCATaGAACTCGAGGGGATGCCACTGTCCTCAATCAACA +
Preference number: 6 (lower is better)
Translates to: DPFTSSVNVMAP*NSRGCHCPQST
Trigger: TGTTGATTGAGGACAGTGGCATCCCCTCGAGTTGCATGGCGCCATTACATTCACGGAGGACGTGAACGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493928.1
CDS CCA 72 bp ATGACTGCTTGCCCCACTCCGCTGTTGGATGCATTCTaGATGACAGAATCCCCTGGCTGCAGTTGCTCGAAG +
Preference number: 6 (lower is better)
Translates to: MTACPTPLLDAF*MTESPGCSCSK
Trigger: CTTCGAGCAACTGCAGCCAGGGGATTCTGTCATCCAGAATGCATCCAACAGCGGAGTGGGGCAAGCAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000478505.6
ENST00000489248.5
CDS CAA 72 bp ACAGATCCCAGCCTGGATAAGGTCACAATGGCTCCTTaGAGGCCAAGGCTGTACACTCGACGACCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: TDPSLDKVTMAP*RPRLYTRRPWL
Trigger: CAGCCAAGGTCGTCGAGTGTACAGCCTTGGCCTCAAAGGAGCCATTGTGACCTTATCCAGGCTGGGATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463052.5
ENST00000489248.5
ENST00000493928.1
CDS GCA 72 bp TCCGTGAATGTAATGGCGCCATGCAACTCGAGGGGATaGCACTGTCCTCAATCAACAGATCCCAGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: SVNVMAPCNSRG*HCPQSTDPSLD
Trigger: ATCCAGGCTGGGATCTGTTGATTGAGGACAGTGGCATCCCCTCGAGTTGCATGGCGCCATTACATTCACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463052.5
ENST00000464915.1
ENST00000489248.5
ENST00000493928.1
CDS GCA 72 bp ACCTCGTTCACGTCCTCCGTGAATGTAATGGCGCCATaGAACTCGAGGGGATGCCACTGTCCTCAATCAACA +
Preference number: 6 (lower is better)
Translates to: TSFTSSVNVMAP*NSRGCHCPQST
Trigger: TGTTGATTGAGGACAGTGGCATCCCCTCGAGTTGCATGGCGCCATTACATTCACGGAGGACGTGAACGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463052.5
ENST00000464915.1
ENST00000489248.5
CDS GCA 72 bp ATTTCGGGCCTTCTTAGCTCCTCTTCTGTGATGACATaGTCAGCCCCCAGACTCTTCAGTCTGTCACTCAGC +
Preference number: 6 (lower is better)
Translates to: ISGLLSSSSVMT*SAPRLFSLSLS
Trigger: GCTGAGTGACAGACTGAAGAGTCTGGGGGCTGAGCATGTCATCACAGAAGAGGAGCTAAGAAGGCCCGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000463412.1
ENST00000464511.1
ENST00000473030.5
ENST00000475773.5
ENST00000478505.6
ENST00000490529.5
CDS GCA 72 bp TGCCCAGGAATTACGGTTCTGTTTTGTGGCAGGTCCTaGTGCAGACACAAACTACAAGTCCGTGGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: CPGITVLFCGRS*CRHKLQVRGRD
Trigger: GTCTCTCCCACGGACTTGTAGTTTGTGTCTGCAGCAGGACCTGCCACAAAACAGAACCGTAATTCCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS CAA 90 bp ATGACTTTGGTCCTAGTTTCCACTCAACATTGTGCTGACCTGGACTaGGCTCGAACTGGCGATGGGACTCAGTCACTTGATGGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: MTLVLVSTQHCADLD*ARTGDGTQSLDGPP
Trigger: GGGAGGACCATCAAGTGACTGAGTCCCATCGCCAGTTCGAGCCAAGTCCAGGTCAGCACAATGTTGAGTGGAAACTAGGACCAAAGTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464511.1
CDS CAA 90 bp GAGGCTGAGGAAGGAGAGTTGCTTGTGCTCAGGAGTTCAAGGCTATaGTGTACCATCATCACACCTGTGAATGACCACTGCACTCTAGCC +
Preference number: 6 (lower is better)
Translates to: EAEEGELLVLRSSRL*CTIITPVNDHCTLA
Trigger: GGCTAGAGTGCAGTGGTCATTCACAGGTGTGATGATGGTACACAATAGCCTTGAACTCCTGAGCACAAGCAACTCTCCTTCCTCAGCCTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493928.1
CDS TCA 72 bp CAGATCCCAGCCTGGATAAGGTCACAATGGCTCCTTTaGGGCCAAGGCTGTACACCTGTGATGCCATATGAA +
Preference number: 6 (lower is better)
Translates to: QIPAWIRSQWLL*GQGCTPVMPYE
Trigger: TTCATATGGCATCACAGGTGTACAGCCTTGGCCTCAAAGGAGCCATTGTGACCTTATCCAGGCTGGGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464915.1
CDS TCA 72 bp TGGTTATACCTCTGTAGTCCCAGCTACTTGGGAGGCTaGGGAAGGAGAGTTGCTTGTGCTCAGGAGTTCAAG +
Preference number: 6 (lower is better)
Translates to: WLYLCSPSYLGG*GRRVACAQEFK
Trigger: CTTGAACTCCTGAGCACAAGCAACTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGACTACAGAGGTATAACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493928.1
CDS GCA 72 bp CCTCGAAGTTTGAGATCCTTAAAAATGAGCAGGCTCTaGAGACACAGGAAGGACATGCTGGGCTCACAGAGG +
Preference number: 6 (lower is better)
Translates to: PRSLRSLKMSRL*RHRKDMLGSQR
Trigger: CCTCTGTGAGCCCAGCATGTCCTTCCTGTGTCTGCAGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475773.5
CDS GCA 72 bp CCAGGAATTACGGTTCTGTTTTGTGGCAGGTCCTGCTaGAGACACAAACTACAAGTCCGTGGGAGAGACACT +
Preference number: 6 (lower is better)
Translates to: PGITVLFCGRSC*RHKLQVRGRDT
Trigger: AGTGTCTCTCCCACGGACTTGTAGTTTGTGTCTGCAGCAGGACCTGCCACAAAACAGAACCGTAATTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS CAA 90 bp CAAAGGGGAAGGCTGAGAAACCAGTGCCCAAATAGCTGGATGACTTaGGTCCTAGTTTCCACTCAACATTGTGCTGACCTGGACTTGGCT +
Preference number: 6 (lower is better)
Translates to: QRGRLRNQCPNSWMT*VLVSTQHCADLDLA
Trigger: AGCCAAGTCCAGGTCAGCACAATGTTGAGTGGAAACTAGGACCAAAGTCATCCAGCTATTTGGGCACTGGTTTCTCAGCCTTCCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464511.1
CDS CCA 72 bp CCTGGGGACTGGCACAGTTATACTTGCTGTGTAAGGTaGGCATTAGCTAGCTCTGCTGAGATATCTTTCCTG +
Preference number: 6 (lower is better)
Translates to: PGDWHSYTCCVR*ALASSAEISFL
Trigger: CAGGAAAGATATCTCAGCAGAGCTAGCTAATGCCCACCTTACACAGCAAGTATAACTGTGCCAGTCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464915.1
CDS TCA 72 bp CCTCTGGAACAATTCCCTGGTTATACCTTGGCTGTGTaGCCTTGGACGAGTGATTTTACCTCTTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: PLEQFPGYTLAV*PWTSDFTSSAS
Trigger: TGAGGCAGAAGAGGTAAAATCACTCGTCCAAGGTCACACAGCCAAGGTATAACCAGGGAATTGTTCCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482610.1
CDS CAA 72 bp AGGCTGAGAAACCAGTGCCCAAATAGCTGGATGACTTaGGTCCTAGTTTCCACTCAACATTGTGCTGACCTG +
Preference number: 6 (lower is better)
Translates to: RLRNQCPNSWMT*VLVSTQHCADL
Trigger: CAGGTCAGCACAATGTTGAGTGGAAACTAGGACCAAAGTCATCCAGCTATTTGGGCACTGGTTTCTCAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464511.1
CDS CAA 72 bp GAAGGAGAGTTGCTTGTGCTCAGGAGTTCAAGGCTATaGTGTACCATCATCACACCTGTGAATGACCACTGC +
Preference number: 6 (lower is better)
Translates to: EGELLVLRSSRL*CTIITPVNDHC
Trigger: GCAGTGGTCATTCACAGGTGTGATGATGGTACACAATAGCCTTGAACTCCTGAGCACAAGCAACTCTCCTTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493928.1
CDS CAA 90 bp GACACAAACTACAAGTCCGTGGGAGAGACACTACATGGTTCTCATTaGGGGTACATTCCTGGAAATGGAGGAGTGTTCATCAGAGCTGTA +
Preference number: 6 (lower is better)
Translates to: DTNYKSVGETLHGSH*GYIPGNGGVFIRAV
Trigger: TACAGCTCTGATGAACACTCCTCCATTTCCAGGAATGTACCCCAAATGAGAACCATGTAGTGTCTCTCCCACGGACTTGTAGTTTGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS GCA 72 bp CTCCAGCTCTTTTGGGATGATCACATGGTGAGAATCTaGTTTGAAGATATGAAGGGCTTCATGGAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: LQLFWDDHMVRI*FEDMKGFMEAS
Trigger: GGAAGCCTCCATGAAGCCCTTCATATCTTCAAAGCAGATTCTCACCATGTGATCATCCCAAAAGAGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000473030.5
ENST00000475773.5
ENST00000483435.5
CDS CCA 72 bp GAATCCGTAGTTTCCTTGGATCATATTTATGTCAGATaGATTGATAGGGGCCGCCAGCATCTTCACACGGAC +
Preference number: 6 (lower is better)
Translates to: ESVVSLDHIYVR*IDRGRQHLHTD
Trigger: GTCCGTGTGAAGATGCTGGCGGCCCCTATCAATCCATCTGACATAAATATGATCCAAGGAAACTACGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000463052.5
ENST00000464915.1
ENST00000474946.5
ENST00000475861.6
ENST00000478505.6
ENST00000482610.1
ENST00000489248.5
ENST00000490529.5
CDS CAA 72 bp TCCTTCTTCCACTGGGACAACCAAAAGCCTCGAAGTTaGAGATCCTTAAAAATGAGCAGGCTCACAGAGGCT +
Preference number: 6 (lower is better)
Translates to: SFFHWDNQKPRS*RSLKMSRLTEA
Trigger: AGCCTCTGTGAGCCTGCTCATTTTTAAGGATCTCAAACTTCGAGGCTTTTGGTTGTCCCAGTGGAAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000263702.11
ENST00000373791.7
ENST00000453185.5
ENST00000473030.5
ENST00000478505.6
ENST00000483435.5
CDS CAA 72 bp TACAAGTCCGTGGGAGAGACACTACATGGTTCTCATTaGGGGTACATTCCTGGAAATGGAGGAGTGTTCATC +
Preference number: 6 (lower is better)
Translates to: YKSVGETLHGSH*GYIPGNGGVFI
Trigger: GATGAACACTCCTCCATTTCCAGGAATGTACCCCAAATGAGAACCATGTAGTGTCTCTCCCACGGACTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS CCA 72 bp AGAGACACTACATGGTTCTCATTTGGGGTACATTCCTaGAAATGGAGGAGTGTTCATCAGAGCTGTACCAGT +
Preference number: 6 (lower is better)
Translates to: RDTTWFSFGVHS*KWRSVHQSCTS
Trigger: ACTGGTACAGCTCTGATGAACACTCCTCCATTTCCAGGAATGTACCCCAAATGAGAACCATGTAGTGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484012.5
CDS CCA 72 bp GCTGTTATCAGTTGTAGGAATATCCAAGGAAACCTCTaGAACAATTCCCTGGTTATACCTCGTTCACGTCCT +
Preference number: 6 (lower is better)
Translates to: AVISCRNIQGNL*NNSLVIPRSRP
Trigger: AGGACGTGAACGAGGTATAACCAGGGAATTGTTCCAGAGGTTTCCTTGGATATTCCTACAACTGATAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463052.5
ENST00000464915.1
ENST00000489248.5
CDS CCA 72 bp GCTGTTATCAGTTGTAGGAATATCCAAGGAAACCTCTaGAACAATTCCCTGGTTATACCTTCGACGACCTTG +
Preference number: 6 (lower is better)
Translates to: AVISCRNIQGNL*NNSLVIPSTTL
Trigger: CAAGGTCGTCGAAGGTATAACCAGGGAATTGTTCCAGAGGTTTCCTTGGATATTCCTACAACTGATAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474946.5
ENST00000475861.6
CDS CCA 72 bp GCTGTTATCAGTTGTAGGAATATCCAAGGAAACCTCTaGAACAATTCCCTGGTTATACCTTGGCTGTGTGAC +
Preference number: 6 (lower is better)
Translates to: AVISCRNIQGNL*NNSLVIPWLCD
Trigger: GTCACACAGCCAAGGTATAACCAGGGAATTGTTCCAGAGGTTTCCTTGGATATTCCTACAACTGATAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482610.1