RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MECP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169057

Ensembl transcript IDs: ENST00000303391.11, ENST00000369957.5, ENST00000407218.5, ENST00000415944.3, ENST00000453960.7, ENST00000460227.4, ENST00000463644.5, ENST00000481807.3, ENST00000486506.5, ENST00000488293.4, ENST00000496908.5, ENST00000611468.2, ENST00000625300.1, ENST00000626422.2, ENST00000627864.1, ENST00000628176.2, ENST00000629277.1, ENST00000630151.2, ENST00000637791.1, ENST00000637917.1, ENST00000674996.1, ENST00000675526.1, ENST00000675841.1, ENST00000676382.1

Found 1536 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACTCGGACCCTACTGGCAGGGAGGCCTGCGAGGCTGACTCCACATaGGCTCACCCTGACCAGGTCACGGGAAGGGGACTGGGGGAGTCA +
Preference number: 1 (lower is better)
Translates to: HSDPTGREACEADST*AHPDQVTGRGLGES
Trigger: TGACTCCCCCAGTCCCCTTCCCGTGACCTGGTCAGGGTGAGCCCATGTGGAGTCAGCCTCGCAGGCCTCCCTGCCAGTAGGGTCCGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp GACTGGGGGAGTCAGGCCACCCCAGTGGACTCCAGCTCCCAGAGGTaGAAGGCGACCAGGCTGTGCCGACTACGTTCCGGACTTCAGCAG +
Preference number: 1 (lower is better)
Translates to: DWGSQATPVDSSSQR*KATRLCRLRSGLQQ
Trigger: CTGCTGAAGTCCGGAACGTAGTCGGCACAGCCTGGTCGCCTTCCACCTCTGGGAGCTGGAGTCCACTGGGGTGGCCTGACTCCCCCAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp TGTTTGTACTTTTCTGCGGCCGTGGCGGCGGTGGCAACCGCGGGCTaGGTCTTAGCTGGCTCCTTGGGGCAGCCGTCGCTCTCCAGTGAG +
Preference number: 1 (lower is better)
Translates to: CLYFSAAVAAVATAG*VLAGSLGQPSLSSE
Trigger: CTCACTGGAGAGCGACGGCTGCCCCAAGGAGCCAGCTAAGACTCAGCCCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGTACAAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR GCA 90 bp ACCCCAGTGGACTCCAGCTCCCAGAGGTGGAAGGCGACCAGGCTGTaGCGACTACGTTCCGGACTTCAGCAGGTCAAGGGAGCGCTCCTG +
Preference number: 1 (lower is better)
Translates to: TPVDSSSQRWKATRL*RLRSGLQQVKGALL
Trigger: CAGGAGCGCTCCCTTGACCTGCTGAAGTCCGGAACGTAGTCGGCACAGCCTGGTCGCCTTCCACCTCTGGGAGCTGGAGTCCACTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CCTGACCCCAGGCCAGCCTGCCTGCACCTTGTCCTACTGCCTCCATaGCCTCTAGCGCCACCCGTTGGAGGACGTCCCTTGAGAATGGAC +
Preference number: 1 (lower is better)
Translates to: PDPRPACLHLVLLPP*PLAPPVGGRPLRMD
Trigger: GTCCATTCTCAAGGGACGTCCTCCAACGGGTGGCGCTAGAGGCCATGGAGGCAGTAGGACAAGGTGCAGGCAGGCTGGCCTGGGGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp ATCTCCAGCTCACTGAGCTGTCAAGACCGGCAATCCCACTGGCTATaGCAAGCCCACCAGCAGGCAGGGCCGGGAGGGGTAGACCTGGGG +
Preference number: 1 (lower is better)
Translates to: ISSSLSCQDRQSHWL*QAHQQAGPGGVDLG
Trigger: CCCCAGGTCTACCCCTCCCGGCCCTGCCTGCTGGTGGGCTTGTCATAGCCAGTGGGATTGCCGGTCTTGACAGCTCAGTGAGCTGGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CCTGCACCTTGTCCTACTGCCTCCATGGCCTCTAGCGCCACCCGTTaGAGGACGTCCCTTGAGAATGGACCATGCCACCTCACCCTGGGC +
Preference number: 1 (lower is better)
Translates to: PAPCPTASMASSATR*RTSLENGPCHLTLG
Trigger: GCCCAGGGTGAGGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAACGGGTGGCGCTAGAGGCCATGGAGGCAGTAGGACAAGGTGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp GGTACTGGCAGCAGGAGGACAAAGGGCAGGCAGAGTTCTGGGGACTaGAGCCGACAAGTGTGGTTGGGCACCGCGGCTGCCTGGAAGAGA +
Preference number: 1 (lower is better)
Translates to: GTGSRRTKGRQSSGD*SRQVWLGTAAAWKR
Trigger: TCTCTTCCAGGCAGCCGCGGTGCCCAACCACACTTGTCGGCTCCAGTCCCCAGAACTCTGCCTGCCCTTTGTCCTCCTGCTGCCAGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp GGGCTGAGTCTTAGCTGGCTCCTTGGGGCAGCCGTCGCTCTCCAGTaGGCCTCCTCTGGGCATCTTCTCCTCTTTGCAGACGCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: GLSLSWLLGAAVALQ*ASSGHLLLFADAAA
Trigger: AGCAGCAGCGTCTGCAAAGAGGAGAAGATGCCCAGAGGAGGCTCACTGGAGAGCGACGGCTGCCCCAAGGAGCCAGCTAAGACTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR GCA 90 bp GAGCAGAGCAGGAGTGGGCAAGGCAGGCTGCCCCTCAGGCAGAAGTaGCTTCCTAGTTCCCTGGGTGTTTTCCTGACACGTCAGCGCTGG +
Preference number: 1 (lower is better)
Translates to: EQSRSGQGRLPLRQK*LPSSLGVFLTRQRW
Trigger: CCAGCGCTGACGTGTCAGGAAAACACCCAGGGAACTAGGAAGGCACTTCTGCCTGAGGGGCAGCCTGCCTTGCCCACTCCTGCTCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp AGTGGGAAGGATGAAACACACTCGGACCCTACTGGCAGGGAGGCCTaGGAGGCTGACTCCACATGGGCTCACCCTGACCAGGTCACGGGA +
Preference number: 1 (lower is better)
Translates to: SGKDETHSDPTGREA*EADSTWAHPDQVTG
Trigger: TCCCGTGACCTGGTCAGGGTGAGCCCATGTGGAGTCAGCCTCGCAGGCCTCCCTGCCAGTAGGGTCCGAGTGTGTTTCATCCTTCCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CTGTTCACGGCCAAACATCAGCGGCAACGGCCTCCTCGCCTCCTCTaGCCCTATCCCAGGCTGGGTGGGAAAGAGCATCATGACCCACTG +
Preference number: 1 (lower is better)
Translates to: LFTAKHQRQRPPRLL*PYPRLGGKEHHDPL
Trigger: CAGTGGGTCATGATGCTCTTTCCCACCCAGCCTGGGATAGGGGCAGAGGAGGCGAGGAGGCCGTTGCCGCTGATGTTTGGCCGTGAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp GGCTTGCTGGCTTGGAGTGGGACTCCTGGGCTCCACTGCTTTGGGTaGCTTCTGGCTGATCTGGGCAGGGGTCATCTGTTCAGCTCTCCC +
Preference number: 1 (lower is better)
Translates to: GLLAWSGTPGLHCFG*LLADLGRGHLFSSP
Trigger: GGGAGAGCTGAACAGATGACCCCTGCCCAGATCAGCCAGAAGCCACCCAAAGCAGTGGAGCCCAGGAGTCCCACTCCAAGCCAGCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp AACAATGTCTTTGCGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCTaGGGCCGTGGCGGCGGTGGCAACCGCGGGCTGAGTCTTAGCTGG +
Preference number: 1 (lower is better)
Translates to: NNVFALSLPSVFVLF*GRGGGGNRGLSLSW
Trigger: CCAGCTAAGACTCAGCCCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CCA 90 bp CAGACACCCTGCCTAGCTCTTCCAGATGCTGCACCCGGCATGCAATaGTCACTACAGTCAGCACTCTCCGCCTCTCAGAGGAGGGAGGGG +
Preference number: 1 (lower is better)
Translates to: QTPCLALPDAAPGMQ*SLQSALSASQRREG
Trigger: CCCCTCCCTCCTCTGAGAGGCGGAGAGTGCTGACTGTAGTGACCATTGCATGCCGGGTGCAGCATCTGGAAGAGCTAGGCAGGGTGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp GGGTGGCCTGTGTTACTGGCAATGCTGTCCATAGCTCTCGGCCTCTaGGCTGGCACAGGGGAGCATGACTTCAACTCAGGAGGGGGCAGA +
Preference number: 1 (lower is better)
Translates to: GWPVLLAMLSIALGL*AGTGEHDFNSGGGR
Trigger: TCTGCCCCCTCCTGAGTTGAAGTCATGCTCCCCTGTGCCAGCCCAGAGGCCGAGAGCTATGGACAGCATTGCCAGTAACACAGGCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp GCTGCTCCCTGTCCCAGGTGCACTGTTCATGCTTCGGGCCTGGAATaGTGCCACCCAACAGAAGATTGTCTGCACCCGCACTGGCGCTCA +
Preference number: 1 (lower is better)
Translates to: AAPCPRCTVHASGLE*CHPTEDCLHPHWRS
Trigger: TGAGCGCCAGTGCGGGTGCAGACAATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGCATGAACAGTGCACCTGGGACAGGGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp AATGCTGTCCATAGCTCTCGGCCTCTGGGCTGGCACAGGGGAGCATaGCTTCAACTCAGGAGGGGGCAGACACCCTGCCTAGCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: NAVHSSRPLGWHRGA*LQLRRGQTPCLALP
Trigger: TGGAAGAGCTAGGCAGGGTGTCTGCCCCCTCCTGAGTTGAAGTCATGCTCCCCTGTGCCAGCCCAGAGGCCGAGAGCTATGGACAGCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CAGCTATTCGGCTTGCTGGCTTGGAGTGGGACTCCTGGGCTCCACTaGTTTGGGTGGCTTCTGGCTGATCTGGGCAGGGGTCATCTGTTC +
Preference number: 1 (lower is better)
Translates to: QLFGLLAWSGTPGLH*FGWLLADLGRGHLF
Trigger: GAACAGATGACCCCTGCCCAGATCAGCCAGAAGCCACCCAAAGCAGTGGAGCCCAGGAGTCCCACTCCAAGCCAGCAAGCCGAATAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CCCGTTGGAGGACGTCCCTTGAGAATGGACCATGCCACCTCACCCTaGGCCATCCTCTCCTGTGGTTCAGGCCAGTCTACACCCAGTAGT +
Preference number: 1 (lower is better)
Translates to: PVGGRPLRMDHATSP*AILSCGSGQSTPSS
Trigger: ACTACTGGGTGTAGACTGGCCTGAACCACAGGAGAGGATGGCCCAGGGTGAGGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp TGCACTACGCTAGACTCTGGACTTCTGAGTGAGGTCAAGGTCGGCTaGCATGGAGCCCCTGTTGGGCCACTCGATGACTGGCAGGCCACA +
Preference number: 1 (lower is better)
Translates to: CTTLDSGLLSEVKVG*HGAPVGPLDDWQAT
Trigger: TGTGGCCTGCCAGTCATCGAGTGGCCCAACAGGGGCTCCATGCCAGCCGACCTTGACCTCACTCAGAAGTCCAGAGTCTAGCGTAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp TTGGGGCTGCTCCCTGTCCCAGGTGCACTGTTCATGCTTCGGGCCTaGAATGATGCCACCCAACAGAAGATTGTCTGCACCCGCACTGGC +
Preference number: 1 (lower is better)
Translates to: LGLLPVPGALFMLRA*NDATQQKIVCTRTG
Trigger: GCCAGTGCGGGTGCAGACAATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGCATGAACAGTGCACCTGGGACAGGGAGCAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp TGTGCCCCAAGTGCACCTCTCCCAACCTCAGACAGGTTTCCAGGCTaGAGCCAGCTCCCTTCTGCACAGGGTGGCCTGTGTTACTGGCAA +
Preference number: 1 (lower is better)
Translates to: CAPSAPLPTSDRFPG*SQLPSAQGGLCYWQ
Trigger: TTGCCAGTAACACAGGCCACCCTGTGCAGAAGGGAGCTGGCTCCAGCCTGGAAACCTGTCTGAGGTTGGGAGAGGTGCACTTGGGGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp GGAGCTGTGCTAGCGCCTGGCTGTGACCAAGTATCTCCAGCTCACTaGGCTGTCAAGACCGGCAATCCCACTGGCTATGACAAGCCCACC +
Preference number: 1 (lower is better)
Translates to: GAVLAPGCDQVSPAH*AVKTGNPTGYDKPT
Trigger: GGTGGGCTTGTCATAGCCAGTGGGATTGCCGGTCTTGACAGCTCAGTGAGCTGGAGATACTTGGTCACAGCCAGGCGCTAGCACAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp ACTTCAACTCAGGAGGGGGCAGACACCCTGCCTAGCTCTTCCAGATaGTGCACCCGGCATGCAATGGTCACTACAGTCAGCACTCTCCGC +
Preference number: 1 (lower is better)
Translates to: TSTQEGADTLPSSSR*CTRHAMVTTVSTLR
Trigger: GCGGAGAGTGCTGACTGTAGTGACCATTGCATGCCGGGTGCAGCATCTGGAAGAGCTAGGCAGGGTGTCTGCCCCCTCCTGAGTTGAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp GAGTGTCCTCTCAACTGCTCTGTCGCTCTGTCTCTAACGACCACATaGGGGAAAGGTTTGGGCGGGAGGGGAGGTGCCTGGTCAACAGCT +
Preference number: 1 (lower is better)
Translates to: ECPLNCSVALSLTTT*GKGLGGRGGAWSTA
Trigger: AGCTGTTGACCAGGCACCTCCCCTCCCGCCCAAACCTTTCCCCCATGTGGTCGTTAGAGACAGAGCGACAGAGCAGTTGAGAGGACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp AGCTCGGGTCTTGGGAGTTCTGCATTGGTACCGCTACTGCCCTGCTaGACTACGCTAGACTCTGGACTTCTGAGTGAGGTCAAGGTCGGC +
Preference number: 1 (lower is better)
Translates to: SSGLGSSALVPLLPC*TTLDSGLLSEVKVG
Trigger: GCCGACCTTGACCTCACTCAGAAGTCCAGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCCGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CCCAGCTCGGGTCTTGGGAGTTCTGCATTGGTACCGCTACTGCCCTaGTGCACTACGCTAGACTCTGGACTTCTGAGTGAGGTCAAGGTC +
Preference number: 1 (lower is better)
Translates to: PSSGLGSSALVPLLP*CTTLDSGLLSEVKV
Trigger: GACCTTGACCTCACTCAGAAGTCCAGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCCGAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CGTGGTAGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTaGACTCCACTGTCCAGCTCCCCAGAAACACTGAACCGGGTGGGC +
Preference number: 1 (lower is better)
Translates to: RGSKGRSRLQVLQAF*TPLSSSPETLNRVG
Trigger: GCCCACCCGGTTCAGTGTTTCTGGGGAGCTGGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCTACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp TCCCCAAATGTTCTTGAATTCAAAGGTAGGATTTCCTCCAGGGTCTaGGCTCTGCCTGTGCACAAGTCGGAGCCCGGAGCGGGAGCTGGG +
Preference number: 1 (lower is better)
Translates to: SPNVLEFKGRISSRV*ALPVHKSEPGAGAG
Trigger: CCCAGCTCCCGCTCCGGGCTCCGACTTGTGCACAGGCAGAGCCCAGACCCTGGAGGAAATCCTACCTTTGAATTCAAGAACATTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp CCGACAAGTGTGGTTGGGCACCGCGGCTGCCTGGAAGAGAAGGGATaGACTAGGAAGGAGGAGGATGGAGGAAGGGAAAGAAGTGAAAGG +
Preference number: 1 (lower is better)
Translates to: PTSVVGHRGCLEEKG*TRKEEDGGRERSER
Trigger: CCTTTCACTTCTTTCCCTTCCTCCATCCTCCTCCTTCCTAGTTCATCCCTTCTCTTCCAGGCAGCCGCGGTGCCCAACCACACTTGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp TTCTTACCAGGGAAGAGGGGGCTACCTAGGAGAGCAAGACCTTGCTaGTCTCTTGCTCTTCACAGACAGGCCAGGTCGGACTCAGCAGAG +
Preference number: 1 (lower is better)
Translates to: FLPGKRGLPRRARPC*SLALHRQARSDSAE
Trigger: CTCTGCTGAGTCCGACCTGGCCTGTCTGTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCTAGGTAGCCCCCTCTTCCCTGGTAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CTAACGACCACATGGGGGAAAGGTTTGGGCGGGAGGGGAGGTGCCTaGTCAACAGCTTGTCTGGTCAGTAGTATCTGCAGCAAGCCTTGT +
Preference number: 1 (lower is better)
Translates to: LTTTWGKGLGGRGGA*STACLVSSICSKPC
Trigger: ACAAGGCTTGCTGCAGATACTACTGACCAGACAAGCTGTTGACCAGGCACCTCCCCTCCCGCCCAAACCTTTCCCCCATGTGGTCGTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp AAGTGCCTTCCTAGTTCCCTGGGTGTTTTCCTGACACGTCAGCGCTaGGGCAGGCTCTGTCAAGATGAGAAGAGTGGGAAGGAGGGTGGT +
Preference number: 1 (lower is better)
Translates to: KCLPSSLGVFLTRQR*GRLCQDEKSGKEGG
Trigger: ACCACCCTCCTTCCCACTCTTCTCATCTTGACAGAGCCTGCCCCAGCGCTGACGTGTCAGGAAAACACCCAGGGAACTAGGAAGGCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp GGGAATACAGCATCAACAGAAGGGAGCTGTGCTAGCGCCTGGCTGTaGCCAAGTATCTCCAGCTCACTGAGCTGTCAAGACCGGCAATCC +
Preference number: 1 (lower is better)
Translates to: GNTASTEGSCASAWL*PSISSSLSCQDRQS
Trigger: GGATTGCCGGTCTTGACAGCTCAGTGAGCTGGAGATACTTGGTCACAGCCAGGCGCTAGCACAGCTCCCTTCTGTTGATGCTGTATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CAGGTGACAATTTGGGGCTGCTCCCTGTCCCAGGTGCACTGTTCATaGTTCGGGCCTGGAATGATGCCACCCAACAGAAGATTGTCTGCA +
Preference number: 1 (lower is better)
Translates to: QVTIWGCSLSQVHCS*FGPGMMPPNRRLSA
Trigger: TGCAGACAATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGCATGAACAGTGCACCTGGGACAGGGAGCAGCCCCAAATTGTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp ACAGCAATGAAAAGCTGGGCAGAGAAGCAGGTGACAATTTGGGGCTaGTCCCTGTCCCAGGTGCACTGTTCATGCTTCGGGCCTGGAATG +
Preference number: 1 (lower is better)
Translates to: TAMKSWAEKQVTIWG*SLSQVHCSCFGPGM
Trigger: CATTCCAGGCCCGAAGCATGAACAGTGCACCTGGGACAGGGAGCAGCCCCAAATTGTCACCTGCTTCTCTGCCCAGCTTTTCATTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CCAATTCCAGATGGTCCCGCGCAGGGGACTCCGCTCGTATCCCTCTaGTCCCTCCTGGGCTTGAGCCGCTTACTAAGTGATTTAAAATTC +
Preference number: 1 (lower is better)
Translates to: PIPDGPAQGTPLVSL*SLLGLSRLLSDLKF
Trigger: GAATTTTAAATCACTTAGTAAGCGGCTCAAGCCCAGGAGGGAGCAGAGGGATACGAGCGGAGTCCCCTGCGCGGGACCATCTGGAATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp ACCGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTaGACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCC +
Preference number: 1 (lower is better)
Translates to: TVSRVLRFLMGSTVS*TDRIEDSFTAFFLA
Trigger: GGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR CCA 90 bp TCCGGACTTCAGCAGGTCAAGGGAGCGCTCCTGCACCCAGAACCTTaGGACCTCTTTCACAAGCACGGGAGAAACAAGAGTGCAAAACCT +
Preference number: 1 (lower is better)
Translates to: SGLQQVKGALLHPEP*DLFHKHGRNKSAKP
Trigger: AGGTTTTGCACTCTTGTTTCTCCCGTGCTTGTGAAAGAGGTCCCAAGGTTCTGGGTGCAGGAGCGCTCCCTTGACCTGCTGAAGTCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp TTTTTCTTACCAGGGAAGAGGGGGCTACCTAGGAGAGCAAGACCTTaGTGCTCTCTTGCTCTTCACAGACAGGCCAGGTCGGACTCAGCA +
Preference number: 1 (lower is better)
Translates to: FFLPGKRGLPRRARP*CSLALHRQARSDSA
Trigger: TGCTGAGTCCGACCTGGCCTGTCTGTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCTAGGTAGCCCCCTCTTCCCTGGTAAGAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CCAGACTTGAGCCACCACGGGTGGGATCGCACAGGCCATAGCCACTaGTCATATCCATCTTCTCTAAAGAATCCAACTGTCTCTCCTGCC +
Preference number: 1 (lower is better)
Translates to: PDLSHHGWDRTGHSH*SYPSSLKNPTVSPA
Trigger: GGCAGGAGAGACAGTTGGATTCTTTAGAGAAGATGGATATGACCAGTGGCTATGGCCTGTGCGATCCCACCCGTGGTGGCTCAAGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CTCTTTCACAAGCACGGGAGAAACAAGAGTGCAAAACCTGGGTGCTaGCTGGAGCCTCCTTCACCTGGCACAGGAAAGCCCTTGAAAGAA +
Preference number: 1 (lower is better)
Translates to: LFHKHGRNKSAKPGC*LEPPSPGTGKPLKE
Trigger: TTCTTTCAAGGGCTTTCCTGTGCCAGGTGAAGGAGGCTCCAGGCAGCACCCAGGTTTTGCACTCTTGTTTCTCCCGTGCTTGTGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp ATTGAAATTGAGGTCACACCCCAAAACTGGGCCGGACACAGCTGGTaGGAATCCTGCAGCTTAAGGCTTTCCCTCCAACCTCCTGTCAAC +
Preference number: 1 (lower is better)
Translates to: IEIEVTPQNWAGHSW*ESCSLRLSLQPPVN
Trigger: GTTGACAGGAGGTTGGAGGGAAAGCCTTAAGCTGCAGGATTCTCACCAGCTGTGTCCGGCCCAGTTTTGGGGTGTGACCTCAATTTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp TTACTGGATATAATCAGGGTCACCAGGAAGAACAGCTTTGCCACTTaGCACACAAACACTGCGGGGAGAGGGGCTATCAGTGGGCAGGAG +
Preference number: 1 (lower is better)
Translates to: LLDIIRVTRKNSFAT*HTNTAGRGAISGQE
Trigger: CTCCTGCCCACTGATAGCCCCTCTCCCCGCAGTGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTGGTGACCCTGATTATATCCAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp TGGTTATTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTaGGCAGAGAAGCAGGTGACAATTTGGGGCTGCTCCCTGTCCCAG +
Preference number: 1 (lower is better)
Translates to: WLLPSFAITVTAMKS*AEKQVTIWGCSLSQ
Trigger: CTGGGACAGGGAGCAGCCCCAAATTGTCACCTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAATAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp AAACAAGAGTGCAAAACCTGGGTGCTGCCTGGAGCCTCCTTCACCTaGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAAT +
Preference number: 1 (lower is better)
Translates to: KQECKTWVLPGASFT*HRKALERSEEKTTN
Trigger: ATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGTGAAGGAGGCTCCAGGCAGCACCCAGGTTTTGCACTCTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp AAACACAGCACACGTTACAGTGTCCAGATACACGGGAGCCCAGCATaGGCAAGGGCTCGGCACACATTGAGTAACAGTCCTGGTGATATT +
Preference number: 1 (lower is better)
Translates to: KHSTRYSVQIHGSPA*ARARHTLSNSPGDI
Trigger: AATATCACCAGGACTGTTACTCAATGTGTGCCGAGCCCTTGCCCATGCTGGGCTCCCGTGTATCTGGACACTGTAACGTGTGCTGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp TCTGCGGGCTCAGCAGAGTGGTGGGCTGATGGCTGCACGGGCTCATaGTTGCCCTCTTTCTCTTCTTTCTTATCTTTCTTCACCTTTTTA +
Preference number: 1 (lower is better)
Translates to: SAGSAEWWADGCTGS*LPSFSSFLSFFTFL
Trigger: TAAAAAGGTGAAGAAAGATAAGAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR GCA 90 bp ATCAAATACACATCATACTTCCCAGCAGAGCGGCCAGATTTCCTTTaGTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGTCATCA +
Preference number: 1 (lower is better)
Translates to: IKYTSYFPAERPDFL*LSFRVQPSGRVGSS
Trigger: TGATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTATGATGTGTATTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR CCA 90 bp AAGGGTGGGGGAGACTGTGGATGTGGCCTTAATGACCTAGCCCCATaGGTACTGGAAAGCTGTCGGTCAATTCTGCTGTTCACAAATTCA +
Preference number: 1 (lower is better)
Translates to: KGGGDCGCGLNDLAP*VLESCRSILLFTNS
Trigger: TGAATTTGTGAACAGCAGAATTGACCGACAGCTTTCCAGTACCCATGGGGCTAGGTCATTAAGGCCACATCCACAGTCTCCCCCACCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAGCTTTaGCACTTGACACACAAACACTGCGGGGAGAGGGGCTATCAGTGG +
Preference number: 1 (lower is better)
Translates to: LCVTGYNQGHQEEQL*HLTHKHCGERGYQW
Trigger: CCACTGATAGCCCCTCTCCCCGCAGTGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp ACTGACCAAAATAAACATCTTCTCAGTGACAACCTGGTCGGATGCTaGGCTCTCGTGGATAAGTGTCCTTTGGTAGTGCCAGGAGTTCGA +
Preference number: 1 (lower is better)
Translates to: TDQNKHLLSDNLVGC*ALVDKCPLVVPGVR
Trigger: TCGAACTCCTGGCACTACCAAAGGACACTTATCCACGAGAGCGCAGCATCCGACCAGGTTGTCACTGAGAAGATGTTTATTTTGGTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CCAACTGACCAAAATAAACATCTTCTCAGTGACAACCTGGTCGGATaGTGCGCTCTCGTGGATAAGTGTCCTTTGGTAGTGCCAGGAGTT +
Preference number: 1 (lower is better)
Translates to: PTDQNKHLLSDNLVG*CALVDKCPLVVPGV
Trigger: AACTCCTGGCACTACCAAAGGACACTTATCCACGAGAGCGCAGCATCCGACCAGGTTGTCACTGAGAAGATGTTTATTTTGGTCAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp TACACAAGACAACACACACTTGACAGTTCATGGCAGCAGCTCACATaGGACATGCCTGTGGGTGTTTCTGGAAGCATAAGACTGCTGTCT +
Preference number: 1 (lower is better)
Translates to: YTRQHTLDSSWQQLT*DMPVGVSGSIRLLS
Trigger: AGACAGCAGTCTTATGCTTCCAGAAACACCCACAGGCATGTCCCATGTGAGCTGCTGCCATGAACTGTCAAGTGTGTGTTGTCTTGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp GCAGGTGGAAGGGATCAGGGATCAGGGATTGGGCTGATGGGAGTTTaGTTGCAGGACTTGCTTTTACAGCATAAGGAAATGGACACATAT +
Preference number: 1 (lower is better)
Translates to: AGGRDQGSGIGLMGV*LQDLLLQHKEMDTY
Trigger: ATATGTGTCCATTTCCTTATGCTGTAAAAGCAAGTCCTGCAACCAAACTCCCATCAGCCCAATCCCTGATCCCTGATCCCTTCCACCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CGACGACATACAGTATTGTCAGGAGAGGAGGTAGTAACTAACAACTaGAACAAGGGTGGGGGAGACTGTGGATGTGGCCTTAATGACCTA +
Preference number: 1 (lower is better)
Translates to: RRHTVLSGEEVVTNN*NKGGGDCGCGLNDL
Trigger: TAGGTCATTAAGGCCACATCCACAGTCTCCCCCACCCTTGTTCCAGTTGTTAGTTACTACCTCCTCTCCTGACAATACTGTATGTCGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CAGTTCATGGCAGCAGCTCACATGGGACATGCCTGTGGGTGTTTCTaGAAGCATAAGACTGCTGTCTCATTTGCTACTTTGATAAGGTAC +
Preference number: 1 (lower is better)
Translates to: QFMAAAHMGHACGCF*KHKTAVSFATLIRY
Trigger: GTACCTTATCAAAGTAGCAAATGAGACAGCAGTCTTATGCTTCCAGAAACACCCACAGGCATGTCCCATGTGAGCTGCTGCCATGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp CAGCAAACACTTAGAGTTTCGGAGCTTCGTGGGAACCCTATGTGCTaGGCCCACTTTAAAACAAGCGCAGGTATATATACAAATCCAGGT +
Preference number: 1 (lower is better)
Translates to: QQTLRVSELRGNPMC*AHFKTSAGIYTNPG
Trigger: ACCTGGATTTGTATATATACCTGCGCTTGTTTTAAAGTGGGCTCAGCACATAGGGTTCCCACGAAGCTCCGAAACTCTAAGTGTTTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CAGCTAAAGAAACTCCTTTCTCCACCCAACTTGGCAGTTTGTGTCTaGTTATTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGC +
Preference number: 1 (lower is better)
Translates to: QLKKLLSPPNLAVCV*LLPSFAITVTAMKS
Trigger: GCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAATAACCAGACACAAACTGCCAAGTTGGGTGGAGAAAGGAGTTTCTTTAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp CCTATCTTCATTGGCCATCTGTATCTCTTCTTTTATGAATTTCCTTaGCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAA +
Preference number: 1 (lower is better)
Translates to: PIFIGHLYLFFYEFP*PDPAHCIKVLSFKQ
Trigger: TTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGGAAATTCATAAAAGAAGAGATACAGATGGCCAATGAAGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR CCA 90 bp GCAGGTATATATACAAATCCAGGTAGTTCTCAACACTGTCACATCTaGTGGCTTGAGGGACTAAATGTCACCAATTCAAGCCAGTTTGCT +
Preference number: 1 (lower is better)
Translates to: AGIYTNPGSSQHCHI*WLEGLNVTNSSQFA
Trigger: AGCAAACTGGCTTGAATTGGTGACATTTAGTCCCTCAAGCCACCAGATGTGACAGTGTTGAGAACTACCTGGATTTGTATATATACCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 90 bp TTTTATGAATTTCCTGTTCATAGTCTTTGTTCATTAGTGGTGACTTaGCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAA +
Preference number: 1 (lower is better)
Translates to: FYEFPVHSLCSLVVT*PDPAHCIKVLSFKQ
Trigger: TTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCACCACTAATGAACAAAGACTATGAACAGGAAATTCATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674996.1
3UTR TCA 90 bp CACACATTGAGTAACAGTCCTGGTGATATTTGGTCATATATTCATTaGCTACTGACTCTGGAGCGGCTGTTATTGATTGAAGCAGTGACA +
Preference number: 1 (lower is better)
Translates to: HTLSNSPGDIWSYIH*LLTLERLLLIEAVT
Trigger: TGTCACTGCTTCAATCAATAACAGCCGCTCCAGAGTCAGTAGTCAATGAATATATGACCAAATATCACCAGGACTGTTACTCAATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 90 bp CCAATTCAAGCCAGTTTGCTCTCAGAGCATCTGTTTGTTTTGAAGTaGGAACATGAAGACTCAATAGTGCAAATAATTCTAAGCTGTCCC +
Preference number: 1 (lower is better)
Translates to: PIQASLLSEHLFVLK*EHEDSIVQIILSCP
Trigger: GGGACAGCTTAGAATTATTTGCACTATTGAGTCTTCATGTTCCCACTTCAAAACAAACAGATGCTCTGAGAGCAAACTGGCTTGAATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 90 bp AGAATCTGCAGGTGTGAACTTGAAACAGGAATCCATTTGGGGCAATaGCACAGGCTAAAAATGTATATGCCCAAAGATCTTCTTAAAGAA +
Preference number: 1 (lower is better)
Translates to: RICRCELETGIHLGQ*HRLKMYMPKDLLKE
Trigger: TTCTTTAAGAAGATCTTTGGGCATATACATTTTTAGCCTGTGTCATTGCCCCAAATGGATTCCTGTTTCAAGTTCACACCTGCAGATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCGGCTCAGCAGAGTGGTaGGCTGATGGCTGCACGGGC +
Preference number: 2 (lower is better)
Translates to: DDGAPLFGGGRSFRHSRGGSAEW*ADGCTG
Trigger: GCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCC...GCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR CAA 90 bp TCCGGCACAGCCGGGGCGGAGCCTGACCCTTCTGATGTCTCTGCTTaGCCTGCCTCTGCGGGCTCAGCAGAGTGGTGGGCTGATGGCTGC +
Preference number: 2 (lower is better)
Translates to: SGTAGAEPDPSDVSA*PASAGSAEWWADGC
Trigger: GCAGCCATCAGCCCACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGAGACATCAGAAGGGTCAGGCTCCGCCCCGGCTGTGCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR GCA 90 bp GATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCTGGTGGGCTGATGGCTaGACGGGCTCATGCTTGCCC +
Preference number: 2 (lower is better)
Translates to: DDGAPLFGGGRSFRHSRGWWADG*TGSCLP
Trigger: GGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCA...GCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR GCA 90 bp TCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGGGCTTCACTCGGCGGCAGCGGCTaGCACCACACTCCCCGGCTT +
Preference number: 2 (lower is better)
Translates to: SSVLSRSSHRGWTPAGASLGGSG*HHTPRL
Trigger: AAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCCGAG...TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR CCA 90 bp CTAACTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCGGTGGTGCTCCTTCTTaGGGGGTGAGGAGGCGCTGC +
Preference number: 2 (lower is better)
Translates to: LTLSVTGVRLSTGSSLFGGGAPS*GVRRRC
Trigger: GCAGCGCCTCCTCACCCCCCAAGAAGGAGCACCACC...GCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR TCA 90 bp GCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGCCCCCTGGCGAAGTTTaGAAAGGCATCTTGACAAGG +
Preference number: 2 (lower is better)
Translates to: AAAAATTLPGFRPRFLGMPPGEV*KGILTR
Trigger: CCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGG...CATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR TCA 90 bp TGTCTTTGCGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCTGCGGCCGTGGCGGGCCGTCGCTCTCCAGTaGGCCTCCTCTGGGCATCTT +
Preference number: 2 (lower is better)
Translates to: CLCALPPLGVCTFLRPWRAVALQ*ASSGHL
Trigger: AAGATGCCCAGAGGAGGCTCACTGGAGAGCGACGGC...CCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CAA 90 bp GTCTCCTGCACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTaGGCCTCGGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGG +
Preference number: 2 (lower is better)
Translates to: VSCTDRIEDSFTAFF*ASAAAAATTLPGFR
Trigger: CCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR CAA 90 bp CGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTaGGCATGGAGGATGAAACAATGTCTTTGCGCTCTCCCTCCCCTC +
Preference number: 2 (lower is better)
Translates to: RSRASGCPQAPLCLA*AWRMKQCLCALPPL
Trigger: GAGGGGAGGGAGAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR TCA 90 bp CAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGCCTCCCCCTGGCGAAGTTTaGAAAGGCATCTTGACAAGG +
Preference number: 2 (lower is better)
Translates to: QRLPPHSPAFGPVSWEWPPPGEV*KGILTR
Trigger: CCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGG...AGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR TCA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGGAGCAGGTGCAGGTATaGACATCAGCTGACGCTGGC +
Preference number: 2 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWREQVQV*TSADAG
Trigger: GCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTC...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR CCA 90 bp GTCACGGATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCTTGTCCTTGAGGCCCTaGAGGTCCTGGTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: VTDDGAPLFGGGRSFRHSLSLRP*RSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAA...GCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCATCCGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CCA 90 bp CTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTTGGCCTCAGCCTTGCCCCCTaGCGAAGTTTGAAAAGGCAT +
Preference number: 2 (lower is better)
Translates to: LSVTGVRLSTGSSLFGLGLSLAP*RSLKRH
Trigger: ATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCTGAG...GCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CAA 90 bp CAGACAGGTGCCACTTTCCTGTCCTGTGAAGCGTCCTTGCCAGTTTaGGATTGGGGCTGGTGTGGGGCCAGACTTGAGCCACCACGGGTG +
Preference number: 2 (lower is better)
Translates to: QTGATFLSCEASLPV*DWGWCGARLEPPRV
Trigger: CACCCGTGGTGGCTCAAGTCTGGCCCCACACCAGCCCCAATCCAAAACTGGCAAGGACGCTTCACAGGACAGGAAAGTGGCACCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp CAGGGAAGAGGGGGCTACCTAGGAGAGCAAGACCTTGCTGCTCTCTaGCTCTTCACAGACAGGCCAGGTCGGACTCAGCAGAGCCCAAGG +
Preference number: 2 (lower is better)
Translates to: QGRGGYLGEQDLAAL*LFTDRPGRTQQSPR
Trigger: CCTTGGGCTCTGCTGAGTCCGACCTGGCCTGTCTGTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCTAGGTAGCCCCCTCTTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp GGGGACCCAGGTACTGGTCCCAGCTCGGGTCTTGGGAGTTCTGCATaGGTACCGCTACTGCCCTGCTGCACTACGCTAGACTCTGGACTT +
Preference number: 2 (lower is better)
Translates to: GDPGTGPSSGLGSSA*VPLLPCCTTLDSGL
Trigger: AAGTCCAGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCCGAGCTGGGACCAGTACCTGGGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp CGAGTAGCAGCTTCCGCCATCCAGCGAGCTGAGAAGCTGGGGCCGTaGGCTAGTTTGGCACTGATGGATTGGGGGATGTGGCGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: RVAASAIQRAEKLGP*ASLALMDWGMWRFW
Trigger: CCAGAAACGCCACATCCCCCAATCCATCAGTGCCAAACTAGCCAACGGCCCCAGCTTCTCAGCTCGCTGGATGGCGGAAGCTGCTACTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp CTCTTCTCACCGAGGGTGGACACCAGCAGGGGCTTCACCACTTCCTaGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTTGATG +
Preference number: 2 (lower is better)
Translates to: LFSPRVDTSRGFTTS*TSMLTVSRVLRFLM
Trigger: CATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGAGGCCTGCGAGGCTaGCTCCACATGGGCTCACCC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGGLRG*LHMGSP
Trigger: GGGTGAGCCCATGTGGAGTCAGCCTCGCAGGCCTCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATTTTGAAAAGGCATCTTaGCAAGGAGCTTCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNFEKAS*QGASQD
Trigger: GTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAA...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR TCA 90 bp CTAACTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCTTCTTGGGAATGGCCTaGGGGTCGGCCTCAGCTTTT +
Preference number: 2 (lower is better)
Translates to: LTLSVTGVRLSTGSSLFGFLGMA*GSASAF
Trigger: AAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAA...GCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTTGAGCCACCACGGGTaGGATCGCACAGGCCATAGC +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDLSHHG*DRTGHS
Trigger: GCTATGGCCTGTGCGATCCCACCCGTGGTGGCTCAA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGTCCTACTGCCTCCATaGCCTCTAGCGCCACCCGTT +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDVLLPP*PLAPPV
Trigger: AACGGGTGGCGCTAGAGGCCATGGAGGCAGTAGGAC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAGGCTGCCCCAGCCCTaGTCCTCCGAAGGGCTCACG +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSRLPQP*SSEGLT
Trigger: CGTGAGCCCTTCGGAGGACCAGGGCTGGGGCAGCCT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AAGTCAGCTAACTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTTCTTCTCACCGAGGGTaGACACCAGCAGGGGCTTCA +
Preference number: 2 (lower is better)
Translates to: KSANSLGHGRPAVHRLLSSSHRG*TPAGAS
Trigger: TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGA...AGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAGCTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CAA 90 bp CTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTaGGCCTTGGCATGGAGGATGAAACAATGTCTTTGCGCTCTCCCT +
Preference number: 2 (lower is better)
Translates to: LSRSRASGCPQAPLC*ALAWRMKQCLCALP
Trigger: AGGGAGAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCCATCGGCCCTGAATaGACTGTCATGGGTGACAGG +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPIGPE*TVMGDR
Trigger: CCTGTCACCCATGACAGTTCATTCAGGGCCGATGGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACCTCTCACCCCGCTGTaGTCTGCCCGGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLPLTPL*SARPDP
Trigger: GGGGTCAGGCCGGGCAGAGCACAGCGGGGTGAGAGG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGTGGGCAAGGCAGGCTaGCCCTCAGGCAGAAGTGCC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSVGKAG*PSGRSA
Trigger: GGCACTTCTGCCTGAGGGGCAGCCTGCCTTGCCCAC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGGAGCTGGGGGTTGTaGTCCCTCCTTGCACTGCCC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGSWGL*SLLALP
Trigger: GGGCAGTGCAAGGAGGGAGCACAACCCCCAGCTCCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CCTTCAGGCAGGGTGGGGTCATCATACATGGGTCCCCGGTCACGGATGATGGAGGGCTGCACGGGCTCATaGTTGCCCTCTTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: PSGRVGSSYMGPRSRMMEGCTGS*LPSFSS
Trigger: AGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCC...CTCCATCATCCGTGACCGGGGACCCATGTATGATGACCCCACCCTGCCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCGTCCTTGCCAGTTTTaGATTGGGGCTGGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDRPCQF*IGAGVG
Trigger: CCCCACACCAGCCCCAATCCAAAACTGGCAAGGACG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGCCGACAAGTGTGGTTaGGCACCGCGGCTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPADKCG*APRLPG
Trigger: TCCAGGCAGCCGCGGTGCCCAACCACACTTGTCGGC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp AGTGACAACCTGGTCGGATGCTGCGCTCTCGTGGATAAGTGTCCTTaGGTAGTGCCAGGAGTTCGAGGCCACTATGGGGGCAGGAGCCTT +
Preference number: 2 (lower is better)
Translates to: SDNLVGCCALVDKCP*VVPGVRGHYGGRSL
Trigger: AAGGCTCCTGCCCCCATAGTGGCCTCGAACTCCTGGCACTACCAAAGGACACTTATCCACGAGAGCGCAGCATCCGACCAGGTTGTCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp CACTGTTCATGCTTCGGGCCTGGAATGATGCCACCCAACAGAAGATaGTCTGCACCCGCACTGGCGCTCACGAGTAGCAGCTTCCGCCAT +
Preference number: 2 (lower is better)
Translates to: HCSCFGPGMMPPNRR*SAPALALTSSSFRH
Trigger: ATGGCGGAAGCTGCTACTCGTGAGCGCCAGTGCGGGTGCAGACAATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGCATGAACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp GGCTTCACCACTTCCTTGACCTCGATGCTGACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATA +
Preference number: 2 (lower is better)
Translates to: GFTTSLTSMLTVSRV*RFLMGSTVSCTDRI
Trigger: TATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGGCAGCATGAGAGCTaGAGGGCCCCTGCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGQHES*RAPACQ
Trigger: CTGGCAGGCAGGGGCCCTGCAGCTCTCATGCTGCCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGAAGCTACCGAGCAGGTaGAGGTATGAACATCAGCTG +
Preference number: 2 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWRKLPSR*RYEHQL
Trigger: CAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTT...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCAAGGTCGGCTGGCATaGAGCCCCTGTTGGGCCACT +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSQGRLA*SPCWAT
Trigger: AGTGGCCCAACAGGGGCTCCATGCCAGCCGACCTTG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGAGGTCAAGGTCGGCTaGCATGGAGCCCCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPEVKVG*HGAPVG
Trigger: CCCAACAGGGGCTCCATGCCAGCCGACCTTGACCTC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGAGTGGGAAGGAGGGTaGTGCTGGGCCTTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSEWEGG*CWAFQV
Trigger: GACCTGGAAGGCCCAGCACCACCCTCCTTCCCACTC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CCTTCAGGCAGGGTGGGGTCATCATACATGGGTCCCCGGTCACGGATGATGGAGAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: PSGRVGSSYMGPRSRMMERPWRS*SSDFSS
Trigger: GGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT...CTCCATCATCCGTGACCGGGGACCCATGTATGATGACCCCACCCTGCCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CCA 90 bp TCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGGGCTTCATTGATCACCATGACCTaGGTGGATGTGGTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SSVLSRSSHRGWTPAGASLITMT*VDVVAP
Trigger: TGGGGCCACCACATCCACCCAGGTCATGGTGATCAA...TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR CAA 90 bp ACTTCCTTGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACTCC +
Preference number: 2 (lower is better)
Translates to: TSLTSMLTVSRVLRF*MGSTVSCTDRIEDS
Trigger: GGAGTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTTACCAGGACCAGATaGCGCCCAGGTGACGGGGAA +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLTRTR*RPGDGE
Trigger: TTCCCCGTCACCTGGGCGTCATCTGGTCCTGGTAAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGGCAACTGCCTCTTTaGGGGAGCTGCAGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGQLPL*GSCRWG
Trigger: GCCCCACCTGCAGCTCCCTCAAAGAGGCAGTTGCCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAGGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACATTCTTGGGAATGGCCTaGGGGTCGGCCTCAGCTTTT +
Preference number: 2 (lower is better)
Translates to: QGSYRSSVLSRSSHRGWTFLGMA*GSASAF
Trigger: AAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAA...TGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACCTCTCACCCCGCTGTaGTCTGCCCGGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEPLTPL*SARPDP
Trigger: GGGGTCAGGCCGGGCAGAGCACAGCGGGGTGAGAGG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGTCCTACTGCCTCCATaGCCTCTAGCGCCACCCGTT +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSVLLPP*PLAPPV
Trigger: AACGGGTGGCGCTAGAGGCCATGGAGGCAGTAGGAC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGGCTCAAAACAGGGTaGGGCTGGTACTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGLKTG*GWYWQQ
Trigger: CTGCTGCCAGTACCAGCCCCACCCTGTTTTGAGCCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAAATGTGTGGTGTTCTaGCCCCCTGTCTGCATCGAG +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDKCVVF*PPVCIE
Trigger: CTCGATGCAGACAGGGGGCCAGAACACCACACATTT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGGAGCCTTCTGTCCTTaGAGGAAGAGTTCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDGAFCP*RKSSGG
Trigger: TCCTCCAGAACTCTTCCTCCAAGGACAGAAGGCTCC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCACCTGTAACCTCCCCTaGCCCAGTCAGCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSTCNLP*PSQPRE
Trigger: CTCTCTGGGCTGACTGGGCCAGGGGAGGTTACAGGT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGAAGGAGGGTGGTGCTaGGCCTTCCAGGTCACTGGT +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSEGGWC*AFQVTG
Trigger: ACCAGTGACCTGGAAGGCCCAGCACCACCCTCCTTC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ATCATACTTCCCAGCAGAGCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCGGGCTCAGCAGAGTaGTGGGCTGATGGCTGCACG +
Preference number: 2 (lower is better)
Translates to: IILPSRAARFPLLKLPCPAGSAE*WADGCT
Trigger: CGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGC...TGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGGGAACCCTATGTGCTaGGCCCACTTTAAAACAAGC +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDGNPMC*AHFKTS
Trigger: GCTTGTTTTAAAGTGGGCTCAGCACATAGGGTTCCC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTGTTGGGCCACTCGATaGCTGGCAGGCCACAGGAGG +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQCWATR*LAGHRR
Trigger: CCTCCTGTGGCCTGCCAGTCATCGAGTGGCCCAACA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTCTGGACTTCTGAGTaGGGTCAAGGTCGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLWTSE*GQGRLA
Trigger: TGCCAGCCGACCTTGACCTCACTCAGAAGTCCAGAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGCCGGACACAGCTGGTaGGAATCCTGCAGCTTAAGG +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSAGHSW*ESCSLR
Trigger: CCTTAAGCTGCAGGATTCTCACCAGCTGTGTCCGGC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TTTCCCTGGGGATTGATCAAATACACATCATACTTCCCAGCAGAGCGGCCAGATGTCCCCGGTCACGGATaGTGGAGCGCCGCTGTTTGG +
Preference number: 2 (lower is better)
Translates to: FPWGLIKYTSYFPAERPDVPGHG*WSAAVW
Trigger: CCAAACAGCGGCGCTCCATCATCCGTGACCGGGGAC...ATCTGGCCGCTCTGCTGGGAAGTATGATGTGTATTTGATCAATCCCCAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGGGCGGGAGGGGAGGTaGCTGGTCAACAGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLGREGR*LVNSLS
Trigger: AGACAAGCTGTTGACCAGGCACCTCCCCTCCCGCCC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCAGGCCAGCCTGCCTaGACCTTGTCCTACTGCCTC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPGQPA*TLSYCL
Trigger: GAGGCAGTAGGACAAGGTGCAGGCAGGCTGGCCTGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTCTGGGCTCTGCCTGTaGACAAGTCGGAGCCCGGAG +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLSGLCL*TSRSPE
Trigger: CTCCGGGCTCCGACTTGTGCACAGGCAGAGCCCAGA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCATGGGGGAAAGGTTTaGGCGGGAGGGGAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLHGGKV*AGGEVP
Trigger: AGGCACCTCCCCTCCCGCCCAAACCTTTCCCCCATG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCATGGGGGAAAGGTTTaGGCGGGAGGGGAGGTGCCT +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQHGGKV*AGGEVP
Trigger: AGGCACCTCCCCTCCCGCCCAAACCTTTCCCCCATG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGCACCGCGGCTGCCTaGAAGAGAAGGGATGAACTA +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGTAAA*KRRDEL
Trigger: TAGTTCATCCCTTCTCTTCCAGGCAGCCGCGGTGCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTGGGGACCCAGGTACTaGTCCCAGCTCGGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLWGPRY*SQLGSW
Trigger: CCAAGACCCGAGCTGGGACCAGTACCTGGGTCCCCA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGCAGGCAGGGGGCCTTaGGGAGGCAGTGAGAGGCCA +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEAGRGP*GGSERP
Trigger: TGGCCTCTCACTGCCTCCCCAAGGCCCCCTGCCTGC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAGGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACTCAGCCTTGCCCCCTaGCGAAGTTTGAAAAGGCAT +
Preference number: 2 (lower is better)
Translates to: QGSYRSSVLSRSSHRGWTLSLAP*RSLKRH
Trigger: ATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCTGAG...TGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR CCA 90 bp GTCTCCTGCACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCCTCGTTCGGCCCCGTTTCTTaGGAATGGCCTGAGGGTCGG +
Preference number: 2 (lower is better)
Translates to: VSCTDRIEDSFTAFFLASFGPVS*EWPEGR
Trigger: CCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGAA...CGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGTGTGGGGCCAGACTTaGGCCACCACGGGTGGGATC +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPVWGQT*ATTGGI
Trigger: GATCCCACCCGTGGTGGCTCAAGTCTGGCCCCACAC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTTGGAGGACGTCCCTTaGGAATGGACCATGCCACCT +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLEDVP*EWTMPP
Trigger: AGGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAAGACAACACACACTTaGCAGTTCATGGCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDKTTHT*QFMAAA
Trigger: AGCTGCTGCCATGAACTGTCAAGTGTGTGTTGTCTT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTTCCAGGTCACTGGTaGACGCTCCACCTTCCATAC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLPGHW*TLHLPY
Trigger: GTATGGAAGGTGGAGCGTTCACCAGTGACCTGGAAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp TCGGCCCCGTTTCTTGGGAATGGCCTGAGGGTCGGCCTCAGCTTTTCGCTTCCTCTTGTTGGTTTGCTTTaGAATCCGCTCCGTGTAAAG +
Preference number: 2 (lower is better)
Translates to: SAPFLGNGLRVGLSFSLPLVGLL*NPLRVK
Trigger: CTTTACACGGAGCGGATTGCAAAGCAAACCAACAAG...AGGAAGCGAAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR GCA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGGAGTACGGTCTCCTaGACAGATCGGATAGAAGAC +
Preference number: 2 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPAGSTVS*TDRIED
Trigger: GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCC...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR GCA 90 bp CAATGTCTTTGCGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCTGCGGCCGTGGGCATCTTCTCCTCTTTaGAGACGCTGCTGCTCAAGT +
Preference number: 2 (lower is better)
Translates to: QCLCALPPLGVCTFLRPWASSPL*RRCCSS
Trigger: ACTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGC...CCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGGAGGGGAGGTGCCTaGTCAACAGCTTGTCTGGTC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGRGGA*STACLV
Trigger: GACCAGACAAGCTGTTGACCAGGCACCTCCCCTCCC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGGAGGGGAGGTGCCTaGTCAACAGCTTGTCTGGTC +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGRGGA*STACLV
Trigger: GACCAGACAAGCTGTTGACCAGGCACCTCCCCTCCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATGGAGCCGACAAGTGTaGTTGGGCACCGCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEWSRQV*LGTAAA
Trigger: GGCAGCCGCGGTGCCCAACCACACTTGTCGGCTCCA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGGGCTGATGGGAGTTTaGTTGCAGGACTTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDGLMGV*LQDLLL
Trigger: TAAAAGCAAGTCCTGCAACCAAACTCCCATCAGCCC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTGTCTGCACCCGCACTaGCGCTCACGAGTAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQCLHPH*RSRVAA
Trigger: AGCTGCTACTCGTGAGCGCCAGTGCGGGTGCAGACA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp AGGTTCAGAAGCCATGTCCTCAGGTCGGCTACCTCCAGATTCCCCTaGCCTGTAATGCTCACCAGGCATCTCAGGCCAAGTGCTAAGTAT +
Preference number: 2 (lower is better)
Translates to: RFRSHVLRSATSRFP*PVMLTRHLRPSAKY
Trigger: ATACTTAGCACTTGGCCTGAGATGCCTGGTGAGCATTACAGGCAAGGGGAATCTGGAGGTAGCCGACCTGAGGACATGGCTTCTGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAAGGCGACTGACTCGTaGTGCCTTTGGGAAAGACGA +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSKATDS*CLWERR
Trigger: TCGTCTTTCCCAAAGGCATCACGAGTCAGTCGCCTT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCACAGAGTGGGAAGGATaGAACACACTCGGACCCTAC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSTEWEG*NTLGPY
Trigger: GTAGGGTCCGAGTGTGTTTCATCCTTCCCACTCTGT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGCTCCCCAGAAACACTaGACCGGGTGGGCCCCGCTC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLAPQKH*TGWAPL
Trigger: GAGCGGGGCCCACCCGGTTCAGTGTTTCTGGGGAGC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTTGCTTTGGGCAGCAGATGTGTTaGTGGGATGGGGGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: KLPSRCRYEHQLTLALCFGQQMC*WDGGRR
Trigger: TCTTCTTCCCCCATCCCATCAACACATCTGCTGCCC...AAAGCAAAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCCTGTGAAGCGTCCTTaGCAGTTTTGGATTGGGGCT +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSPVKRP*QFWIGA
Trigger: AGCCCCAATCCAAAACTGGCAAGGACGCTTCACAGG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCCGCTACTGCCCTGCTaGACTACGCTAGACTCTGGA +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQPLLPC*TTLDSG
Trigger: TCCAGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CACATCATACTTCCCAGCAGAGCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTTGTCTCTGCTTTGCCTaGCTCTGCGGGCTCAGCAGA +
Preference number: 2 (lower is better)
Translates to: HIILPSRAARFPLLKLPCCLCFA*LCGLSR
Trigger: TCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGAGACA...ACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTATGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR GCA 90 bp AAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTTGCTTTTCCTTGCCCAGACCCTaGACACTGCATCAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: KLPSRCRYEHQLTLALCFSLPRP*TLHQGP
Trigger: AGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGGA...AAAGCAAAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATACAGGCCATAGCCACTaGTCATATCCATCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDTGHSH*SYPSSL
Trigger: TAGAGAAGATGGATATGACCAGTGGCTATGGCCTGT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTTGGCACTGATGGATTaGGGGATGTGGCGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLALMD*GMWRFW
Trigger: CCAGAAACGCCACATCCCCCAATCCATCAGTGCCAA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAGCGAGCTGAGAAGCTaGGGCCGTTGGCTAGTTTGG +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLSELRS*GRWLVW
Trigger: CCAAACTAGCCAACGGCCCCAGCTTCTCAGCTCGCT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTGCACCCAGAACCTTaGGACCTCTTTCACAAGCAC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLHPEP*DLFHKH
Trigger: GTGCTTGTGAAAGAGGTCCCAAGGTTCTGGGTGCAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTTGCTTTTTGTCCTTGAGGCCCTaGAGGTCCTGGTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: KLPSRCRYEHQLTLALCFLSLRP*RSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAA...AAAGCAAAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR CAA 90 bp GATCAAATACACATCATACTTCCCAGCAGAGCGGCCAGATTTCCTTaGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGTCATC +
Preference number: 2 (lower is better)
Translates to: DQIHIILPSRAARFP*LKLPCPAFRQGGVI
Trigger: GATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTATGATGTGTATTTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGATCAGGGATTGGGCTaGTGGGAGTTTGGTTGCAGG +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLDQGLG*WEFGCR
Trigger: CCTGCAACCAAACTCCCATCAGCCCAATCCCTGATC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCAGGTGGGGCCCGAATaGAATAAAGTGACGCTTGAA +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSQVGPE*NKVTLE
Trigger: TTCAAGCGTCACTTTATTTCATTCGGGCCCCACCTG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTGGCTAGTTTGGCACTaGTGGATTGGGGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLWLVWH*WIGGCG
Trigger: GCCACATCCCCCAATCCATCAGTGCCAAACTAGCCA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACTCAGAAGGCTCAGCTaGTCCGAGGCGAGCAGAGCA +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEELRRLS*SEASRA
Trigger: TGCTCTGCTCGCCTCGGATCAGCTGAGCCTTCTGAG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGAGCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTACTTTTCTTCCGTGTTaGTGGGATGGGGGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: RAARFPLLKLPCPAFRQGTFLPC*WDGGRR
Trigger: TCTTCTTCCCCCATCCCATCAACACGGAAGAAAAGT...ACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGGTCTTGGGAGTTCTaGATTGGTACCGCTACTGCC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGSWEF*IGTATA
Trigger: GGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGCTCCCTGTCCCAGGTaGACTGTTCATGCTTCGGGC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEAPCPR*TVHASG
Trigger: GCCCGAAGCATGAACAGTGCACCTGGGACAGGGAGC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATGGGAAGGAGGGTGGTaGTGGGCCTTCCAGGTCACT +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEWEGGW*WAFQVT
Trigger: AGTGACCTGGAAGGCCCAGCACCACCCTCCTTCCCA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATCTCTAACGACCACATaGGGGAAAGGTTTGGGCGGG +
Preference number: 2 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLSLTTT*GKGLGG
Trigger: CCCGCCCAAACCTTTCCCCCATGTGGTCGTTAGAGA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATTGAGCCACCACGGGTaGGATCGCACAGGCCATAGC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEELSHHG*DRTGHS
Trigger: GCTATGGCCTGTGCGATCCCACCCGTGGTGGCTCAA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTTGCCAGTTTTGGATTaGGGCTGGTGTGGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLPVLD*GWCGAR
Trigger: TCTGGCCCCACACCAGCCCCAATCCAAAACTGGCAA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCAGAGTTCTGGGGACTaGAGCCGACAAGTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQQSSGD*SRQVWL
Trigger: CAACCACACTTGTCGGCTCCAGTCCCCAGAACTCTG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGGCTCAAAACAGGGTaGGGCTGGTACTGGCAGCAG +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGLKTG*GWYWQQ
Trigger: CTGCTGCCAGTACCAGCCCCACCCTGTTTTGAGCCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGCCTGTGGGTGTTTCTaGAAGCATAAGACTGCTGTC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSACGCF*KHKTAV
Trigger: GACAGCAGTCTTATGCTTCCAGAAACACCCACAGGC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAAGCAGGTGACAATTTaGGGCTGCTCCCTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLKQVTI*GCSLSQ
Trigger: CTGGGACAGGGAGCAGCCCCAAATTGTCACCTGCTT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGACCACGAATCTGCTTaGACAGAAGAAGTGACCAGC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSDHESA*TEEVTS
Trigger: GCTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAACACACGCCGGAGCTaGCCCCGGATGTGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKNTRRS*PRMWAQ
Trigger: CTGGGCCCACATCCGGGGCCAGCTCCGGCGTGTGTT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAAATACACATCATACTTCCCAGCAGAGCGGCCAGATTTCCTTTGCTTAAGCTTTGGAGCGCCGCTGTTTaGGGGAGGCAGAAGCTTCCG +
Preference number: 2 (lower is better)
Translates to: QIHIILPSRAARFPLLKLWSAAV*GRQKLP
Trigger: CGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCA...AAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTATGATGTGTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CCA 90 bp TTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTACTTTTCTGCGGCCGTaGCGGCGGTGGCAACCGCGG +
Preference number: 2 (lower is better)
Translates to: FILVGLLCNPLRVKSANSTFLRP*RRWQPR
Trigger: CCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGT...AGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CAA 90 bp GCGGGCTCAGCAGAGTGGTGGGCTGATGGCTGCACGGGCTCATGCTaGCCCTCTTTCTCTTCTTTCTTATCTTTCTTCACCTTTTTAAAC +
Preference number: 2 (lower is better)
Translates to: AGSAEWWADGCTGSC*PSFSSFLSFFTFLN
Trigger: GTTTAAAAAGGTGAAGAAAGATAAGAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR TCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGTTAGGTCTTCAACCTaGCTGTGCTTGTCGGTAAGA +
Preference number: 2 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPVRSST*LCLSVR
Trigger: TCTTACCGACAAGCACAGTCAGGTTGAAGACCTAAC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCATCACATCTGGTGGCTTaGGGGACTAAATGTCACCAA +
Preference number: 2 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPSHLVA*GTKCHQ
Trigger: TTGGTGACATTTAGTCCCTCAAGCCACCAGATGTGA...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAGATGACGCCCAGGTaGCGGGGAAGCAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQMTPR*RGSSSG
Trigger: TCCAGAGCTGCTTCCCCGTCACCTGGGCGTCATCTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAAGGCGACTGACTCGTaGTGCCTTTGGGAAAGACGA +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLKATDS*CLWERR
Trigger: TCGTCTTTCCCAAAGGCATCACGAGTCAGTCGCCTT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTCAGCCCAGAGAGCCTaGCTGGAATGCTCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLSAQRA*LECSGK
Trigger: TTTTCCAGAGCATTCCAGTCAGGCTCTCTGGGCTGA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCCTGGGTGTTTTCCTaGCACGTCAGCGCTGGGGCA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPWVFS*HVSAGA
Trigger: TGCCCCAGCGCTGACGTGTCAGGAAAACACCCAGGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAACAGCTTTGCCACTTaGCACACAAACACTGCGGGG +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLNSFAT*HTNTAG
Trigger: CCCCGCAGTGTTTGTGTGTCAAGTGGCAAAGCTGTT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAGAGCAAGACCTTGCTaGTCTCTTGCTCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSRARPC*SLALHR
Trigger: TCTGTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGTGACAATTTGGGGCTaGTCCCTGTCCCAGGTGCAC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEVTIWG*SLSQVH
Trigger: GTGCACCTGGGACAGGGAGCAGCCCCAAATTGTCAC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCGCTCGTATCCCTCTaGTCCCTCCTGGGCTTGAGC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPLVSL*SLLGLS
Trigger: GCTCAAGCCCAGGAGGGAGCAGAGGGATACGAGCGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTGTCCCAACGTGGTTaGGAGTGGGGGAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLSQRG*EWGRWG
Trigger: CCCCCACCTCCCCCACTCCCAACCACGTTGGGACAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCGTCCTTGCCAGTTTTaGATTGGGGCTGGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPRPCQF*IGAGVG
Trigger: CCCCACACCAGCCCCAATCCAAAACTGGCAAGGACG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGCCATCCTCTCCTGTaGTTCAGGCCAGTCTACACC +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGHPLL*FRPVYT
Trigger: GGTGTAGACTGGCCTGAACCACAGGAGAGGATGGCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCACTGTCACATCTGGTaGCTTGAGGGACTAAATGTC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSHCHIW*LEGLNV
Trigger: GACATTTAGTCCCTCAAGCCACCAGATGTGACAGTG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGACGGGGAAGCAGCTCTaGACAATGATTCCAGAAGCC +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQTGKQL*TMIPEA
Trigger: GGCTTCTGGAATCATTGTCCAGAGCTGCTTCCCCGT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTGTCAGGCTCCACTTaGGCTAAACCAATTCCAGAT +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLSGST*AKPIPD
Trigger: ATCTGGAATTGGTTTAGCCCAAGTGGAGCCTGACAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGTTTTCCTATCTTCATTaGCCATCTGTATCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWRFSYLH*PSVSLL
Trigger: AAGAAGAGATACAGATGGCCAATGAAGATAGGAAAA...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACAACTACTCCCACCCTaGAGCCACGAAACTCTAAGT +
Preference number: 2 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLQLLPP*SHETLS
Trigger: ACTTAGAGTTTCGTGGCTTCAGGGTGGGAGTAGTTG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCACTTTCCTGTCCTGTaGAGCGTCCTTGCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLHFPVL*SVLASF
Trigger: AAAACTGGCAAGGACGCTTCACAGGACAGGAAAGTG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATGTTGGGCCACTCGATaGCTGGCAGGCCACAGGAGG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKCWATR*LAGHRR
Trigger: CCTCCTGTGGCCTGCCAGTCATCGAGTGGCCCAACA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTGTTTCACTCCTTCATaGTTACACCATAGTAAGGAA +
Preference number: 2 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDCFTPS*LHHSKE
Trigger: TTCCTTACTATGGTGTAATCATGAAGGAGTGAAACA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTCACTGTCACAGCAATaGAAAGCTGGGCAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLSLSQQ*KAGQRS
Trigger: GCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGAGTGTCCTCTCAACTaGTCTGTCGCTCTGTCTCTA +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLECPLN*SVALSL
Trigger: TAGAGACAGAGCGACAGAGCAGTTGAGAGGACACTC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGTACCGCTACTGCCCTaGTGCACTACGCTAGACTCT +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEVPLLP*CTTLDS
Trigger: AGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTAC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGGGAAGGAGGGTGGTaGTGGGCCTTCCAGGTCACT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLWEGGW*WAFQVT
Trigger: AGTGACCTGGAAGGCCCAGCACCACCCTCCTTCCCA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp AACTCCACTTTAGAGCGAAAGGCTTTTCCCTGGGGATTGATCAAATACACATCATGCTTTGCCTGCCTCTaGGGGCTCAGCAGAGTGGTG +
Preference number: 2 (lower is better)
Translates to: NSTLERKAFPWGLIKYTSCFACL*GLSRVV
Trigger: CACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCA...TGATGTGTATTTGATCAATCCCCAGGGAAAAGCCTTTCGCTCTAAAGTGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTCCCTGTCCCAACGTaGTTGGGAGTGGGGGAGGTG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLPVPT*LGVGEV
Trigger: CACCTCCCCCACTCCCAACCACGTTGGGACAGGGAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTTGCCAGTTTTGGATTaGGGCTGGTGTGGGGCCAGA +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPLPVLD*GWCGAR
Trigger: TCTGGCCCCACACCAGCCCCAATCCAAAACTGGCAA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTCTAGCGCCACCCGTTaGAGGACGTCCCTTGAGAAT +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPSSATR*RTSLEN
Trigger: ATTCTCAAGGGACGTCCTCCAACGGGTGGCGCTAGA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAGAGTTCTGGGGACTaGAGCCGACAAGTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEQSSGD*SRQVWL
Trigger: CAACCACACTTGTCGGCTCCAGTCCCCAGAACTCTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGAGGTCAAGGTCGGCTaGCATGGAGCCCCTGTTGGG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKEVKVG*HGAPVG
Trigger: CCCAACAGGGGCTCCATGCCAGCCGACCTTGACCTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATCCCAGCTCGGGTCTTaGGAGTTCTGCATTGGTACC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEESQLGS*EFCIGT
Trigger: GGTACCAATGCAGAACTCCCAAGACCCGAGCTGGGA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGAAGGGAAAGAGGCTaGGCAACTGCCTCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGRERG*ATASLR
Trigger: CCTCAAAGAGGCAGTTGCCCAGCCTCTTTCCCTTCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAGGAGCCAAACCTCTTaGCCTTTTCACCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLRSQTS*PFHLIC
Trigger: GCAGATGAGGTGAAAAGGCCAAGAGGTTTGGCTCCT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGAGAGGGGCTATCAGTaGGCAGGAGCCAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEERGYQ*AGAKPL
Trigger: AAGAGGTTTGGCTCCTGCCCACTGATAGCCCCTCTC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGCTTTGGGTGGCTTCTaGCTGATCTGGGCAGGGGTC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLALGGF*LIWAGV
Trigger: GACCCCTGCCCAGATCAGCCAGAAGCCACCCAAAGC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACTAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCC +
Preference number: 2 (lower is better)
Translates to: PDPAHCIKVLSFKQQKSTRPWRS*SSDFSS
Trigger: GGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT...AGTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGACCAGACAGACAGTaGAATGTGTGGTGTTCTGGC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGPDRQ*NVWCSG
Trigger: GCCAGAACACCACACATTTCACTGTCTGTCTGGTCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTTACCAGGACCAGATaGCGCCCAGGTGACGGGGAA +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLTRTR*RPGDGE
Trigger: TTCCCCGTCACCTGGGCGTCATCTGGTCCTGGTAAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAATCCCACTGGCTATaGCAAGCCCACCAGCAGGCA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQSHWL*QAHQQA
Trigger: TGCCTGCTGGTGGGCTTGTCATAGCCAGTGGGATTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGCTAGCGCCTGGCTGTaGCCAAGTATCTCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLASAWL*PSISSS
Trigger: TGAGCTGGAGATACTTGGTCACAGCCAGGCGCTAGC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCATTATTCTTGTTGGTTTaGTTTGCAATCCGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLFLLV*FAIRSV
Trigger: CACGGAGCGGATTGCAAAGCAAACCAACAAGAATAA...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGAAAAACATCCCCAATaGTCCAACTACTCCCACCCT +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQEKHPQ*SNYSHP
Trigger: AGGGTGGGAGTAGTTGGAGCATTGGGGATGTTTTTC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGAAAAACATCCCCAATaGTCCAACTACTCCCACCCT +
Preference number: 2 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLEKHPQ*SNYSHP
Trigger: AGGGTGGGAGTAGTTGGAGCATTGGGGATGTTTTTC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCCTAGTTTAGAAAAGTaGAAAGCTACTTCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSPSLEK*KATSGP
Trigger: AGGGCCAGAAGTAGCTTTGCACTTTTCTAAACTAGG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACCTGTGAAGCGTCCTTaGCAGTTTTGGATTGGGGCT +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEPVKRP*QFWIGA
Trigger: AGCCCCAATCCAAAACTGGCAAGGACGCTTCACAGG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCACAGGAGGCCTCTGTaGTTTCCTCAACTACCAAAT +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLHRRPL*FPQLPN
Trigger: ATTTGGTAGTTGAGGAAAGCACAGAGGCCTCCTGTG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAACCTGGTCGGATGCTaGGCTCTCGTGGATAAGTGT +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEENLVGC*ALVDKC
Trigger: ACACTTATCCACGAGAGCGCAGCATCCGACCAGGTT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCCCTCAGGCAGAAGTaGCTTCCTAGTTCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPLRQK*LPSSLG
Trigger: ACCCAGGGAACTAGGAAGGCACTTCTGCCTGAGGGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGACAAAGCAGGCCTATaGGCACAGTCTATGTGTTAC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLDKAGL*AQSMCY
Trigger: GTAACACATAGACTGTGCGCATAGGCCTGCTTTGTC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGCAAAACCTGGGTGCTaGCTGGAGCCTCCTTCACCT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLAKPGC*LEPPSP
Trigger: AGGTGAAGGAGGCTCCAGGCAGCACCCAGGTTTTGC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAGTTTCGGAGCTTCGTaGGAACCCTATGTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEESFGAS*EPYVLS
Trigger: GCTCAGCACATAGGGTTCCCACGAAGCTCCGAAACT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAAATGTGTGGTGTTCTaGCCCCCTGTCTGCATCGAG +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEKCVVF*PPVCIE
Trigger: CTCGATGCAGACAGGGGGCCAGAACACCACACATTT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCTACACCACAGCTATaGACCAGACAGACAGTGAAA +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPTPQL*TRQTVK
Trigger: TTTCACTGTCTGTCTGGTCCATAGCTGTGGTGTAGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGTAGTAACTAACAACTaGAACAAGGGTGGGGGAGAC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLVVTNN*NKGGGD
Trigger: GTCTCCCCCACCCTTGTTCCAGTTGTTAGTTACTAC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGGATGTGGCGTTTCTaGGTGTCCCCTGTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGMWRF*VSPVSF
Trigger: AAAAGACACAGGGGACACCCAGAAACGCCACATCCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGAGGCTGACTCCACATaGGCTCACCCTGACCAGGTC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKEADST*AHPDQV
Trigger: GACCTGGTCAGGGTGAGCCCATGTGGAGTCAGCCTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAGAAAACACGCACGTaGACGCACGCAGACACCCAC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQKTRT*THADTH
Trigger: GTGGGTGTCTGCGTGCGTCCACGTGCGTGTTTTCTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACACTTTCCTGTCCTGTaGAGCGTCCTTGCCAGTTTT +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEHFPVL*SVLASF
Trigger: AAAACTGGCAAGGACGCTTCACAGGACAGGAAAGTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGTCAACTATGGTTCCTaGTCACTAAAGACTGGCAAG +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQVNYGS*SLKTGK
Trigger: CTTGCCAGTCTTTAGTGATCAGGAACCATAGTTGAC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAGGCTCTGTCAAGATaGGAAGAGTGGGAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQALSR*EEWEGG
Trigger: CCCTCCTTCCCACTCTTCTCATCTTGACAGAGCCTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTGACTCTGAGTGGTGGTaGTGGTGGTGGTGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: FILVGLLCNPLRVKSANSDSEWW*WWWCSF
Trigger: GAAGGAGCACCACCACCATCACCACCACTCAGAGTC...AGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCTTGTTGGTTTGCTTTaGAATCCGCTCCGTGTAAAG +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLVGLL*NPLRVK
Trigger: CTTTACACGGAGCGGATTGCAAAGCAAACCAACAAG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACTTGTTGGTTTGCTTTaGAATCCGCTCCGTGTAAAG +
Preference number: 2 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLVGLL*NPLRVK
Trigger: CTTTACACGGAGCGGATTGCAAAGCAAACCAACAAG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
3UTR-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGAGTGTCCTCTCAACTaGTCTGTCGCTCTGTCTCTA +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPECPLN*SVALSL
Trigger: TAGAGACAGAGCGACAGAGCAGTTGAGAGGACACTC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAGGAGAGCAAGACCTTaGTGCTCTCTTGCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEERRARP*CSLALH
Trigger: GTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGTGACAATTTGGGGCTaGTCCCTGTCCCAGGTGCAC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKVTIWG*SLSQVH
Trigger: GTGCACCTGGGACAGGGAGCAGCCCCAAATTGTCAC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACCCCTCAGGCAGAAGTaGCTTCCTAGTTCCCTGGGT +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKPLRQK*LPSSLG
Trigger: ACCCAGGGAACTAGGAAGGCACTTCTGCCTGAGGGG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCAGCTCTTCAGCTCTaGACACACACATCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPALQL*THTSPP
Trigger: AGGAGGGGATGTGTGTGTGCAGAGCTGAAGAGCTGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGAGCTACTTCTGGCCCTaGTTAGGTCTTCAACCTGAC +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPSYFWP*LGLQPD
Trigger: GTCAGGTTGAAGACCTAACCAGGGCCAGAAGTAGCT...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCTGTCCCAACGTGGTTaGGAGTGGGGGAGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDILSQRG*EWGRWG
Trigger: CCCCCACCTCCCCCACTCCCAACCACGTTGGGACAG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAACAGGCCATAGCCACTaGTCATATCCATCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLTGHSH*SYPSSL
Trigger: TAGAGAAGATGGATATGACCAGTGGCTATGGCCTGT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGGCACCGCGGCTGCCTaGAAGAGAAGGGATGAACTA +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKGTAAA*KRRDEL
Trigger: TAGTTCATCCCTTCTCTTCCAGGCAGCCGCGGTGCC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTGGAGCCGACAAGTGTaGTTGGGCACCGCGGCTGCC +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIWSRQV*LGTAAA
Trigger: GGCAGCCGCGGTGCCCAACCACACTTGTCGGCTCCA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAAAACAGGGTGGGGCTaGTACTGGCAGCAGGAGGAC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKKTGWG*YWQQED
Trigger: GTCCTCCTGCTGCCAGTACCAGCCCCACCCTGTTTT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGGCCACTCGATGACTaGCAGGCCACAGGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGPLDD*QATGGL
Trigger: GAGGCCTCCTGTGGCCTGCCAGTCATCGAGTGGCCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGGGCCACTCGATGACTaGCAGGCCACAGGAGGCCTC +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIGPLDD*QATGGL
Trigger: GAGGCCTCCTGTGGCCTGCCAGTCATCGAGTGGCCC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTGGAACTGTCAACTATaGTTCCTGATCACTAAAGAC +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSWNCQL*FLITKD
Trigger: GTCTTTAGTGATCAGGAACCATAGTTGACAGTTCCA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAGCCTCAGGCCCCACTaGCAGCTCTGGAATAAACTG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSLRPH*QLWNKL
Trigger: CAGTTTATTCCAGAGCTGCCAGTGGGGCCTGAGGCT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTATGGATTGGGGGATGTaGCGTTTCTGGGTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLMDWGM*RFWVSP
Trigger: AGGGGACACCCAGAAACGCCACATCCCCCAATCCAT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGCGAGCTGAGAAGCTaGGGCCGTTGGCTAGTTTGG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKSELRS*GRWLVW
Trigger: CCAAACTAGCCAACGGCCCCAGCTTCTCAGCTCGCT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAAGCAGGTGACAATTTaGGGCTGCTCCCTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLKQVTI*GCSLSQ
Trigger: CTGGGACAGGGAGCAGCCCCAAATTGTCACCTGCTT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTGGCAGTTTGTGTCTaGTTATTACCCTCTTTCGCC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLAVCV*LLPSFA
Trigger: GGCGAAAGAGGGTAATAACCAGACACAAACTGCCAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTGTAATTTTAGACCCTaGGGGAGGCAGTATCCTAAC +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLCNFRP*GRQYPN
Trigger: GTTAGGATACTGCCTCCCCCAGGGTCTAAAATTACA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGAGAGGGGCTATCAGTaGGCAGGAGCCAAACCTCTT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLERGYQ*AGAKPL
Trigger: AAGAGGTTTGGCTCCTGCCCACTGATAGCCCCTCTC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGGAGCCTCCTTCACCTaGCACAGGAAAGCCCTTGAA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLGASFT*HRKALE
Trigger: TTCAAGGGCTTTCCTGTGCCAGGTGAAGGAGGCTCC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGTTAGGTCTTCAACCTaGCTGTGCTTGTCGGTAAGA +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPVRSST*LCLSVR
Trigger: TCTTACCGACAAGCACAGTCAGGTTGAAGACCTAAC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGATCAGGGATTGGGCTaGTGGGAGTTTGGTTGCAGG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKDQGLG*WEFGCR
Trigger: CCTGCAACCAAACTCCCATCAGCCCAATCCCTGATC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGTATCTCCAGCTCACTaGGCTGTCAAGACCGGCAAT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLVSPAH*AVKTGN
Trigger: ATTGCCGGTCTTGACAGCTCAGTGAGCTGGAGATAC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATGGCTAGTTTGGCACTaGTGGATTGGGGGATGTGGC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKWLVWH*WIGGCG
Trigger: GCCACATCCCCCAATCCATCAGTGCCAAACTAGCCA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGCTTCGGGCCTGGAATaGTGCCACCCAACAGAAGAT +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKASGLE*CHPTED
Trigger: ATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTCAGCCCAGAGAGCCTaGCTGGAATGCTCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSAQRA*LECSGK
Trigger: TTTTCCAGAGCATTCCAGTCAGGCTCTCTGGGCTGA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAACAGCTTTGCCACTTaGCACACAAACACTGCGGGG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLNSFAT*HTNTAG
Trigger: CCCCGCAGTGTTTGTGTGTCAAGTGGCAAAGCTGTT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGGATGGGGTGGGATGTaGCGGAAGTGTCTTAAACAG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLGWGGM*RKCLKQ
Trigger: CTGTTTAAGACACTTCCGTCACATCCCACCCCATCC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTATTCTTGTTGGTTTaGTTTGCAATCCGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLFLLV*FAIRSV
Trigger: CACGGAGCGGATTGCAAAGCAAACCAACAAGAATAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGGCGGGAGGGGAGGTaGCTGGTCAACAGCTTGTCT +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGREGR*LVNSLS
Trigger: AGACAAGCTGTTGACCAGGCACCTCCCCTCCCGCCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGACCCCAGGCCAGCCTaGCTGCACCTTGTCCTACTG +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEDPRPA*LHLVLL
Trigger: CAGTAGGACAAGGTGCAGGCAGGCTGGCCTGGGGTC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAGAGCAAGACCTTGCTaGTCTCTTGCTCTTCACAGA +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEERARPC*SLALHR
Trigger: TCTGTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGACTGCTGTCTCATTTaGTACTTTGATAAGGTACTT +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSDCCLI*YFDKVL
Trigger: AAGTACCTTATCAAAGTAGCAAATGAGACAGCAGTC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAAGAGGCTGGGCAACTaGCTCTTTGAGGGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKKRLGN*LFEGAA
Trigger: TGCAGCTCCCTCAAAGAGGCAGTTGCCCAGCCTCTT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCATGGTCATTTTATTaGCCTGGGAAGGGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPWSFY*PGKGRV
Trigger: CACCCTCCCCTTCCCAGGGCAATAAAATGACCATGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTATGCTGCACCCGGCATaGAATGGTCACTACAGTCAG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLMLHPA*NGHYSQ
Trigger: CTGACTGTAGTGACCATTGCATGCCGGGTGCAGCAT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp ATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTCTCATGAAACAATGTCTTTaGGCTCTCCCTCCCCTCGGT +
Preference number: 2 (lower is better)
Translates to: ILVGLLCNPLRVKSANSLMKQCL*ALPPLG
Trigger: ACCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCAT...GAGAGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGTGCAAAGCTACTTCTaGCCCTGGTTAGGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPVQSYF*PWLGLQ
Trigger: TTGAAGACCTAACCAGGGCCAGAAGTAGCTTTGCAC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACACTGTCACATCTGGTaGCTTGAGGGACTAAATGTC +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEHCHIW*LEGLNV
Trigger: GACATTTAGTCCCTCAAGCCACCAGATGTGACAGTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTGGGGACCCAGGTACTaGTCCCAGCTCGGGTCTTGG +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIWGPRY*SQLGSW
Trigger: CCAAGACCCGAGCTGGGACCAGTACCTGGGTCCCCA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATTCTCAGTGACAACCTaGTCGGATGCTGCGCTCTCG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKFSVTT*SDAALS
Trigger: CGAGAGCGCAGCATCCGACCAGGTTGTCACTGAGAA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTACGGGGAAGCAGCTCTaGACAATGATTCCAGAAGCC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLTGKQL*TMIPEA
Trigger: GGCTTCTGGAATCATTGTCCAGAGCTGCTTCCCCGT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTGTGTCTTTTGATATaGGAATACAGCATCAACAGA +
Preference number: 2 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLCLLI*EYSINR
Trigger: TCTGTTGATGCTGTATTCCCATATCAAAAGACACAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTTCTCCACCCAACTTaGCAGTTTGTGTCTGGTTAT +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLFLHPT*QFVSGY
Trigger: ATAACCAGACACAAACTGCCAAGTTGGGTGGAGAAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCTGGAAAAGGAGCTGTaGTTAGACGGGGGACACAGA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLLEKEL*LDGGHR
Trigger: TCTGTGTCCCCCGTCTAACCACAGCTCCTTTTCCAG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGTCTTCACTACTCCTaGAGGGGACCCCTTGGACTG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKSLHYS*RGPLGL
Trigger: CAGTCCAAGGGGTCCCCTCCAGGAGTAGTGAAGACT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp TTGCCCTCTTTCTCTTCTTTCTTATCTTTCTTCACCTTTTTAAACTaGAGGGGTTTGTCCTTGAGGCCCTGGAGGTCCTGGTCTTCTGAC +
Preference number: 2 (lower is better)
Translates to: LPSFSSFLSFFTFLN*RGLSLRPWRSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAAGAAAGATAAGAAAGAAGAGAAAGAGGGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGGACCAGACAGACAGTaGAATGTGTGGTGTTCTGGC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKGPDRQ*NVWCSG
Trigger: GCCAGAACACCACACATTTCACTGTCTGTCTGGTCC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCGAATGAAATAAAGTaGCGCTTGAAATGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPNEIK*RLKCCV
Trigger: AACACAGCATTTCAAGCGTCACTTTATTTCATTCGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTCACTGTCACAGCAATaGAAAGCTGGGCAGAGAAGC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSLSQQ*KAGQRS
Trigger: GCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp GCAATCAACTCCACTTTAGAGCGAAAGGCTTTTCCCTGGGGATTGATCAAATACTTTAAGAGGCTTCTGTaGCTCTGCTCACTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: AINSTLERKAFPWGLIKYFKRLL*LCSLLL
Trigger: CAAGAGGAGTGAGCAGAGTCACAGAAGCCTCTTAAA...GTATTTGATCAATCCCCAGGGAAAAGCCTTTCGCTCTAAAGTGGAGTTGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR TCA 90 bp GCAATCAACTCCACTTTAGAGCGAAAGGCTTTTCCCTGGGGATTGATCAAATACGAGGTCCTGGTCTTCTaGCTTTTCTTCCGTGTTGAT +
Preference number: 2 (lower is better)
Translates to: AINSTLERKAFPWGLIKYEVLVF*LFFRVD
Trigger: ATCAACACGGAAGAAAAGTCAGAAGACCAGGACCTC...GTATTTGATCAATCCCCAGGGAAAAGCCTTTCGCTCTAAAGTGGAGTTGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAACCTGGTCGGATGCTaGGCTCTCGTGGATAAGTGT +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKNLVGC*ALVDKC
Trigger: ACACTTATCCACGAGAGCGCAGCATCCGACCAGGTT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAGCTACTTCTGGCCCTaGTTAGGTCTTCAACCTGAC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSYFWP*LGLQPD
Trigger: GTCAGGTTGAAGACCTAACCAGGGCCAGAAGTAGCT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGAATTGGAAAGTAACTaGAAGAACATTTTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPELESN*KNIFFS
Trigger: GGAGAAGAAAATGTTCTTCCAGTTACTTTCCAATTC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAATGACCTAGCCCCATaGGTACTGGAAAGCTGTCGG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKNDLAP*VLESCR
Trigger: CCGACAGCTTTCCAGTACCCATGGGGCTAGGTCATT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTGGAAAAGGAGCTGTaGTTAGACGGGGGACACAGA +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLEKEL*LDGGHR
Trigger: TCTGTGTCCCCCGTCTAACCACAGCTCCTTTTCCAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACCCAGAGAGCCTGACTaGAATGCTCTGGAAAAGGAG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKPREPD*NALEKE
Trigger: CTCCTTTTCCAGAGCATTCCAGTCAGGCTCTCTGGG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp ATTCTGTCAGCTAAAGAAACTCCTTTCTCCACCCAACTTGGCAGTTaGTGTCTGGTTATTACCCTCTTTCGCCATCACTGTCACAGCAAT +
Preference number: 2 (lower is better)
Translates to: ILSAKETPFSTQLGS*CLVITLFRHHCHSN
Trigger: ATTGCTGTGACAGTGATGGCGAAAGAGGGTAATAACCAGACACAAACTGCCAAGTTGGGTGGAGAAAGGAGTTTCTTTAGCTGACAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp ATTCAGAGATTCTGTCAGCTAAAGAAACTCCTTTCTCCACCCAACTaGGCAGTTTGTGTCTGGTTATTACCCTCTTTCGCCATCACTGTC +
Preference number: 2 (lower is better)
Translates to: IQRFCQLKKLLSPPN*AVCVWLLPSFAITV
Trigger: GACAGTGATGGCGAAAGAGGGTAATAACCAGACACAAACTGCCAAGTTGGGTGGAGAAAGGAGTTTCTTTAGCTGACAGAATCTCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTTTGAAGTGGGAACATaGAGACTCAATAGTGCAAAT +
Preference number: 2 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQFEVGT*RLNSAN
Trigger: ATTTGCACTATTGAGTCTTCATGTTCCCACTTCAAA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTCTAGAGTAGAAGGGTaGAAAGGCTCGTTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSRVEG*KGSLFR
Trigger: CCTGAACAACGAGCCTTTTCACCCTTCTACTCTAGA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCTCTGGACTTCTGAGTaGGGTCAAGGTCGGCTGGCA +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDILWTSE*GQGRLA
Trigger: TGCCAGCCGACCTTGACCTCACTCAGAAGTCCAGAG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TGCATCTCTTTGATTACCAGCAGGCAGAACTCTTTTCCTATCTTCATTGGCCATTTTAAGAGGCTTCTGTaGCTCTGCTCACTCCTCTTG +
Preference number: 2 (lower is better)
Translates to: CISLITSRQNSFPIFIGHFKRLL*LCSLLL
Trigger: CAAGAGGAGTGAGCAGAGTCACAGAAGCCTCTTAAA...ATGGCCAATGAAGATAGGAAAAGAGTTCTGCCTGCTGGTAATCAAAGAGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGGAGAGCAAGACCTTaGTGCTCTCTTGCTCTTCAC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKRRARP*CSLALH
Trigger: GTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCGCTACTGCCCTGCTaGACTACGCTAGACTCTGGA +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPLLPC*TTLDSG
Trigger: TCCAGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGACAAAGCAGGCCTATaGGCACAGTCTATGTGTTAC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLDKAGL*AQSMCY
Trigger: GTAACACATAGACTGTGCGCATAGGCCTGCTTTGTC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAAAACAGGGTGGGGCTaGTACTGGCAGCAGGAGGAC +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIKTGWG*YWQQED
Trigger: GTCCTCCTGCTGCCAGTACCAGCCCCACCCTGTTTT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAACACTTGACAGTTCATaGCAGCAGCTCACATGGGAC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKTLDSS*QQLTWD
Trigger: GTCCCATGTGAGCTGCTGCCATGAACTGTCAAGTGT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGACCACGAATCTGCTTaGACAGAAGAAGTGACCAGC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKDHESA*TEEVTS
Trigger: GCTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTACATCTAAGTTTTGCTaGCGATCGGGTGACAGCCAA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLTSKFC*RSGDSQ
Trigger: TTGGCTGTCACCCGATCGCCAGCAAAACTTAGATGT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTTGGAGGACGTCCCTTaGGAATGGACCATGCCACCT +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDILEDVP*EWTMPP
Trigger: AGGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTTGGACAGAAGAAGTaGCCAGCAGACAGATTTGTC +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLGQKK*PADRFV
Trigger: GACAAATCTGTCTGCTGGTCACTTCTTCTGTCCAAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGTACCGCTACTGCCCTaGTGCACTACGCTAGACTCT +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEVPLLP*CTTLDS
Trigger: AGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTAC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGGGTCTTGGGAGTTCTaGATTGGTACCGCTACTGCC +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIGSWEF*IGTATA
Trigger: GGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGGTCAACAGCTTGTCTaGTCAGTAGTATCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKGQQLV*SVVSAA
Trigger: TGCTGCAGATACTACTGACCAGACAAGCTGTTGACC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTCTAACGACCACATaGGGGAAAGGTTTGGGCGGG +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDISLTTT*GKGLGG
Trigger: CCCGCCCAAACCTTTCCCCCATGTGGTCGTTAGAGA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTAGCGCCACCCGTTaGAGGACGTCCCTTGAGAAT +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDISSATR*RTSLEN
Trigger: ATTCTCAAGGGACGTCCTCCAACGGGTGGCGCTAGA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAACACTGTCACATCTaGTGGCTTGAGGGACTAAAT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQHCHI*WLEGLN
Trigger: ATTTAGTCCCTCAAGCCACCAGATGTGACAGTGTTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCTGATCACTAAAGACTaGCAAGGAAGTGCTAGACAG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLLITKD*QGSARQ
Trigger: CTGTCTAGCACTTCCTTGCCAGTCTTTAGTGATCAG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGGGCTGATGGGAGTTTaGTTGCAGGACTTGCTTTTA +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKGLMGV*LQDLLL
Trigger: TAAAAGCAAGTCCTGCAACCAAACTCCCATCAGCCC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTGTCAGGCTCCACTTaGGCTAAACCAATTCCAGAT +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLSGST*AKPIPD
Trigger: ATCTGGAATTGGTTTAGCCCAAGTGGAGCCTGACAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGTAATTTTAGACCCTaGGGGAGGCAGTATCCTAAC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLCNFRP*GRQYPN
Trigger: GTTAGGATACTGCCTCCCCCAGGGTCTAAAATTACA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCATCTCTTTGATTACCAGCAGGCAGAACTCTTTTCCTATCTTCATTGGCCATTCACAAAGGAGTTCTTaGGCAGCAGATGTGTTGATG +
Preference number: 2 (lower is better)
Translates to: CISLITSRQNSFPIFIGHSQRSS*AADVLM
Trigger: CATCAACACATCTGCTGCCCAAGAACTCCTTTGTGA...ATGGCCAATGAAGATAGGAAAAGAGTTCTGCCTGCTGGTAATCAAAGAGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGTCAACTATGGTTCCTaGTCACTAAAGACTGGCAAG +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKVNYGS*SLKTGK
Trigger: CTTGCCAGTCTTTAGTGATCAGGAACCATAGTTGAC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTATATTCATTGACTACTaGCTCTGGAGCGGCTGTTAT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLIFIDY*LWSGCY
Trigger: ATAACAGCCGCTCCAGAGTCAGTAGTCAATGAATAT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TGCATCTCTTTGATTACCAGCAGGCAGAACTCTTTTCCTATCTTCATTGGCCATGTATCTCTTCTTTTATaGATTTCCTTGCCCAGACCC +
Preference number: 2 (lower is better)
Translates to: CISLITSRQNSFPIFIGHVSLLL*ISLPRP
Trigger: GGGTCTGGGCAAGGAAATTCATAAAAGAAGAGATAC...ATGGCCAATGAAGATAGGAAAAGAGTTCTGCCTGCTGGTAATCAAAGAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCTAGTTTAGAAAAGTaGAAAGCTACTTCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPSLEK*KATSGP
Trigger: AGGGCCAGAAGTAGCTTTGCACTTTTCTAAACTAGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGTGGGAAATGCCTTTTaGTTTTTCTTACCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLVGNAF*FFLPGK
Trigger: CTTCCCTGGTAAGAAAAAGCAAAAGGCATTTCCCAC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAGTTTCGGAGCTTCGTaGGAACCCTATGTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDISFGAS*EPYVLS
Trigger: GCTCAGCACATAGGGTTCCCACGAAGCTCCGAAACT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACTGTGTCTTTTGATATaGGAATACAGCATCAACAGA +
Preference number: 2 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEELCLLI*EYSINR
Trigger: TCTGTTGATGCTGTATTCCCATATCAAAAGACACAG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCAACTACTCCCACCCTaGAGCCACGAAACTCTAAGT +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIQLLPP*SHETLS
Trigger: ACTTAGAGTTTCGTGGCTTCAGGGTGGGAGTAGTTG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGGAACCCTATGTGCTaGGCCCACTTTAAAACAAGC +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGNPMC*AHFKTS
Trigger: GCTTGTTTTAAAGTGGGCTCAGCACATAGGGTTCCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGGAACTGTCAACTATaGTTCCTGATCACTAAAGAC +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLWNCQL*FLITKD
Trigger: GTCTTTAGTGATCAGGAACCATAGTTGACAGTTCCA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATCACATCTGGTGGCTTaGGGGACTAAATGTCACCAA +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTESHLVA*GTKCHQ
Trigger: TTGGTGACATTTAGTCCCTCAAGCCACCAGATGTGA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGTTTCACTCCTTCATaGTTACACCATAGTAAGGAA +
Preference number: 2 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLCFTPS*LHHSKE
Trigger: TTCCTTACTATGGTGTAATCATGAAGGAGTGAAACA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACCGAATGAAATAAAGTaGCGCTTGAAATGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKPNEIK*RLKCCV
Trigger: AACACAGCATTTCAAGCGTCACTTTATTTCATTCGG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACACAGGAGGCCTCTGTaGTTTCCTCAACTACCAAAT +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEHRRPL*FPQLPN
Trigger: ATTTGGTAGTTGAGGAAAGCACAGAGGCCTCCTGTG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTGCAAAGCTACTTCTaGCCCTGGTTAGGTCTTCAA +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVQSYF*PWLGLQ
Trigger: TTGAAGACCTAACCAGGGCCAGAAGTAGCTTTGCAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 90 bp ATGTCACCAATTCAAGCCAGTTTGCTCTCAGAGCATCTGTTTGTTTaGAAGTGGGAACATGAAGACTCAATAGTGCAAATAATTCTAAGC +
Preference number: 2 (lower is better)
Translates to: MSPIQASLLSEHLFV*KWEHEDSIVQIILS
Trigger: GCTTAGAATTATTTGCACTATTGAGTCTTCATGTTCCCACTTCAAAACAAACAGATGCTCTGAGAGCAAACTGGCTTGAATTGGTGACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATTTGAAGTGGGAACATaGAGACTCAATAGTGCAAAT +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKFEVGT*RLNSAN
Trigger: ATTTGCACTATTGAGTCTTCATGTTCCCACTTCAAA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGCTCGTTGTTCAGGGTaGGAAATGCCTTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEARCSG*EMPFAF
Trigger: AAAAGCAAAAGGCATTTCCCACCCTGAACAACGAGC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGCTCGTTGTTCAGGGTaGGAAATGCCTTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIARCSG*EMPFAF
Trigger: AAAAGCAAAAGGCATTTCCCACCCTGAACAACGAGC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTGTTTGTTTTGAAGTaGGAACATGAAGACTCAATA +
Preference number: 2 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLFVLK*EHEDSI
Trigger: TATTGAGTCTTCATGTTCCCACTTCAAAACAAACAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGAATTGGAAAGTAACTaGAAGAACATTTTCTTCTCC +
Preference number: 2 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEELESN*KNIFFS
Trigger: GGAGAAGAAAATGTTCTTCCAGTTACTTTCCAATTC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp TTTTCTGCGGCCGTGGCGGCGGTGGCAACCGCGGGCTaGGTCTTAGCTGGCTCCTTGGGGCAGCCGTCGCTC +
Preference number: 3 (lower is better)
Translates to: FSAAVAAVATAG*VLAGSLGQPSL
Trigger: GAGCGACGGCTGCCCCAAGGAGCCAGCTAAGACTCAGCCCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CCA 72 bp CCTACTGGCAGGGAGGCCTGCGAGGCTGACTCCACATaGGCTCACCCTGACCAGGTCACGGGAAGGGGACTG +
Preference number: 3 (lower is better)
Translates to: PTGREACEADST*AHPDQVTGRGL
Trigger: CAGTCCCCTTCCCGTGACCTGGTCAGGGTGAGCCCATGTGGAGTCAGCCTCGCAGGCCTCCCTGCCAGTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp GTGCCCACAGCAGAGCGTCCCAGCCTCCTGCTTGGGTaGGCCCAGCCCCATTCTCCCCAGCTCTTCAGCTCT +
Preference number: 3 (lower is better)
Translates to: VPTAERPSLLLG*AQPHSPQLFSS
Trigger: AGAGCTGAAGAGCTGGGGAGAATGGGGCTGGGCCCACCCAAGCAGGAGGCTGGGACGCTCTGCTGTGGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp GGGGAGGCAGTGAGAGGCCAGCTCAGAAGGCTCAGCTaGTCCGAGGCGAGCAGAGCAGGAGTGGGCAAGGCA +
Preference number: 3 (lower is better)
Translates to: GEAVRGQLRRLS*SEASRAGVGKA
Trigger: TGCCTTGCCCACTCCTGCTCTGCTCGCCTCGGATCAGCTGAGCCTTCTGAGCTGGCCTCTCACTGCCTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp CCGCTCCAGCCCCCAGGCTCGACAGAGTGGGAAGGATaGAACACACTCGGACCCTACTGGCAGGGAGGCCTG +
Preference number: 3 (lower is better)
Translates to: PLQPPGSTEWEG*NTLGPYWQGGL
Trigger: CAGGCCTCCCTGCCAGTAGGGTCCGAGTGTGTTTCATCCTTCCCACTCTGTCGAGCCTGGGGGCTGGAGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp TTTGCGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCTaGGGCCGTGGCGGCGGTGGCAACCGCGGGCTGAGT +
Preference number: 3 (lower is better)
Translates to: FALSLPSVFVLF*GRGGGGNRGLS
Trigger: ACTCAGCCCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CCA 72 bp AGGCCAGCCTGCCTGCACCTTGTCCTACTGCCTCCATaGCCTCTAGCGCCACCCGTTGGAGGACGTCCCTTG +
Preference number: 3 (lower is better)
Translates to: RPACLHLVLLPP*PLAPPVGGRPL
Trigger: CAAGGGACGTCCTCCAACGGGTGGCGCTAGAGGCCATGGAGGCAGTAGGACAAGGTGCAGGCAGGCTGGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp AGTCAGGCCACCCCAGTGGACTCCAGCTCCCAGAGGTaGAAGGCGACCAGGCTGTGCCGACTACGTTCCGGA +
Preference number: 3 (lower is better)
Translates to: SQATPVDSSSQR*KATRLCRLRSG
Trigger: TCCGGAACGTAGTCGGCACAGCCTGGTCGCCTTCCACCTCTGGGAGCTGGAGTCCACTGGGGTGGCCTGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp ACTCTGAGTGGTGGTGATGGTGGTGGTGCTCCTTCTTaGGGGGTGAGGAGGCGCTGCTGCTGCGCCCCTTGG +
Preference number: 3 (lower is better)
Translates to: TLSGGDGGGAPS*GVRRRCCCAPW
Trigger: CCAAGGGGCGCAGCAGCAGCGCCTCCTCACCCCCCAAGAAGGAGCACCACCACCATCACCACCACTCAGAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR CAA 90 bp CTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTTGGCACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGT +
Preference number: 3 (lower is better)
Translates to: LSVTGVRLSTGSSLFGLGTVSRV*RFLMGS
Trigger: ACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGT...GCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CCA 72 bp TCTGCTTTGCCTGCCTCTGCGGGCTCAGCAGAGTGGTaGGCTGATGGCTGCACGGGCTCATGCTTGCCCTCT +
Preference number: 3 (lower is better)
Translates to: SALPASAGSAEW*ADGCTGSCLPS
Trigger: AGAGGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CAA 90 bp ATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCGTGCACGGGCTCATGCTaGCCCTCTTTCTCTTCTTTC +
Preference number: 3 (lower is better)
Translates to: MMERRCLGEAEASGTAGACTGSC*PSFSSF
Trigger: GAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCA...CGCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CAA 90 bp ACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCTTCCTGCCGGGGCGTTaGATCACCATGACCTGGGTG +
Preference number: 3 (lower is better)
Translates to: TPSRLSFWPRRQRLPPHSFLPGR*ITMTWV
Trigger: CACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAA...GGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR TCA 72 bp CATAGCTCTCGGCCTCTGGGCTGGCACAGGGGAGCATaGCTTCAACTCAGGAGGGGGCAGACACCCTGCCTA +
Preference number: 3 (lower is better)
Translates to: HSSRPLGWHRGA*LQLRRGQTPCL
Trigger: TAGGCAGGGTGTCTGCCCCCTCCTGAGTTGAAGTCATGCTCCCCTGTGCCAGCCCAGAGGCCGAGAGCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp GATGGTCCCGCGCAGGGGACTCCGCTCGTATCCCTCTaGTCCCTCCTGGGCTTGAGCCGCTTACTAAGTGAT +
Preference number: 3 (lower is better)
Translates to: DGPAQGTPLVSL*SLLGLSRLLSD
Trigger: ATCACTTAGTAAGCGGCTCAAGCCCAGGAGGGAGCAGAGGGATACGAGCGGAGTCCCCTGCGCGGGACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp GACTCCAGCTCCCAGAGGTGGAAGGCGACCAGGCTGTaGCGACTACGTTCCGGACTTCAGCAGGTCAAGGGA +
Preference number: 3 (lower is better)
Translates to: DSSSQRWKATRL*RLRSGLQQVKG
Trigger: TCCCTTGACCTGCTGAAGTCCGGAACGTAGTCGGCACAGCCTGGTCGCCTTCCACCTCTGGGAGCTGGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp GATGAAACACACTCGGACCCTACTGGCAGGGAGGCCTaGGAGGCTGACTCCACATGGGCTCACCCTGACCAG +
Preference number: 3 (lower is better)
Translates to: DETHSDPTGREA*EADSTWAHPDQ
Trigger: CTGGTCAGGGTGAGCCCATGTGGAGTCAGCCTCGCAGGCCTCCCTGCCAGTAGGGTCCGAGTGTGTTTCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp GGCAGAGTTCTGGGGACTGGAGCCGACAAGTGTGGTTaGGCACCGCGGCTGCCTGGAAGAGAAGGGATGAAC +
Preference number: 3 (lower is better)
Translates to: GRVLGTGADKCG*APRLPGREGMN
Trigger: GTTCATCCCTTCTCTTCCAGGCAGCCGCGGTGCCCAACCACACTTGTCGGCTCCAGTCCCCAGAACTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp CCTTGGGGCAGCCGTCGCTCTCCAGTGAGCCTCCTCTaGGCATCTTCTCCTCTTTGCAGACGCTGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: PWGSRRSPVSLL*ASSPLCRRCCS
Trigger: TGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGCCCAGAGGAGGCTCACTGGAGAGCGACGGCTGCCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR TCA 72 bp CTTAGCTGGCTCCTTGGGGCAGCCGTCGCTCTCCAGTaGGCCTCCTCTGGGCATCTTCTCCTCTTTGCAGAC +
Preference number: 3 (lower is better)
Translates to: LSWLLGAAVALQ*ASSGHLLLFAD
Trigger: GTCTGCAAAGAGGAGAAGATGCCCAGAGGAGGCTCACTGGAGAGCGACGGCTGCCCCAAGGAGCCAGCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR GCA 72 bp CCCAGGTACTGGTCCCAGCTCGGGTCTTGGGAGTTCTaGATTGGTACCGCTACTGCCCTGCTGCACTACGCT +
Preference number: 3 (lower is better)
Translates to: PRYWSQLGSWEF*IGTATALLHYA
Trigger: AGCGTAGTGCAGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCCGAGCTGGGACCAGTACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp TCTCCAGTGAGCCTCCTCTGGGCATCTTCTCCTCTTTaGAGACGCTGCTGCTCAAGTCCTGGGGCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: SPVSLLWASSPL*RRCCSSPGAQG
Trigger: CCCCTGAGCCCCAGGACTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGCCCAGAGGAGGCTCACTGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CCA 72 bp CTCAACTGCTCTGTCGCTCTGTCTCTAACGACCACATaGGGGAAAGGTTTGGGCGGGAGGGGAGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: LNCSVALSLTTT*GKGLGGRGGAW
Trigger: CCAGGCACCTCCCCTCCCGCCCAAACCTTTCCCCCATGTGGTCGTTAGAGACAGAGCGACAGAGCAGTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAGCCGACAAGTGTGGTaGGGCACCGCGGCTGCCTGG +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSSRQVW*GTAAAW
Trigger: CCAGGCAGCCGCGGTGCCCAACCACACTTGTCGGCT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp CGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGTTGAGGGGTTTGTCCTaGAGGCCCTGGAGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: RPDFLCLSFRVQPSGRVGLRGLS*RPWRSW
Trigger: CCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAA...CCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CAA 90 bp GGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCCGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCC +
Preference number: 3 (lower is better)
Translates to: GLLQVFSPFPLFSPRVDTRVLRF*MGSTVS
Trigger: GGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCG...GGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR CAA 90 bp TCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGGGCTTCACGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCC +
Preference number: 3 (lower is better)
Translates to: SSVLSRSSHRGWTPAGASRVLRF*MGSTVS
Trigger: GGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCG...TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR CAA 90 bp AAGTCAGCTAACTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGGCTTCACCACTTCCTaGACCTCGATGCTGACCGTC +
Preference number: 3 (lower is better)
Translates to: KSANSLGHGRPAVHRLLSGFTTS*TSMLTV
Trigger: GACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCC...AGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAGCTGACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR TCA 72 bp GAGCTGAGAAGCTGGGGCCGTTGGCTAGTTTGGCACTaGTGGATTGGGGGATGTGGCGTTTCTGGGTGTCCC +
Preference number: 3 (lower is better)
Translates to: ELRSWGRWLVWH*WIGGCGVSGCP
Trigger: GGGACACCCAGAAACGCCACATCCCCCAATCCATCAGTGCCAAACTAGCCAACGGCCCCAGCTTCTCAGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp GGGAAGAGGGGGCTACCTAGGAGAGCAAGACCTTGCTaGTCTCTTGCTCTTCACAGACAGGCCAGGTCGGAC +
Preference number: 3 (lower is better)
Translates to: GKRGLPRRARPC*SLALHRQARSD
Trigger: GTCCGACCTGGCCTGTCTGTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCTAGGTAGCCCCCTCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp CTAGACTCTGGACTTCTGAGTGAGGTCAAGGTCGGCTaGCATGGAGCCCCTGTTGGGCCACTCGATGACTGG +
Preference number: 3 (lower is better)
Translates to: LDSGLLSEVKVG*HGAPVGPLDDW
Trigger: CCAGTCATCGAGTGGCCCAACAGGGGCTCCATGCCAGCCGACCTTGACCTCACTCAGAAGTCCAGAGTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp AACCTCCCCTGGCCCAGTCAGCCCAGAGAGCCTGACTaGAATGCTCTGGAAAAGGAGCTGTGGTTAGACGGG +
Preference number: 3 (lower is better)
Translates to: NLPWPSQPREPD*NALEKELWLDG
Trigger: CCCGTCTAACCACAGCTCCTTTTCCAGAGCATTCCAGTCAGGCTCTCTGGGCTGACTGGGCCAGGGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp CTGGGCTCCACTGCTTTGGGTGGCTTCTGGCTGATCTaGGCAGGGGTCATCTGTTCAGCTCTCCCCTCTCAT +
Preference number: 3 (lower is better)
Translates to: LGSTALGGFWLI*AGVICSALPSH
Trigger: ATGAGAGGGGAGAGCTGAACAGATGACCCCTGCCCAGATCAGCCAGAAGCCACCCAAAGCAGTGGAGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp CCCCTCGGTGTTTGTACTTTTCTGCGGCCGTGGCGGCGGTGGCAACCGCGGGCTTCTTGTTGGTTTGCTTaGCAATCCGCTCCGTGTAAA +
Preference number: 3 (lower is better)
Translates to: PLGVCTFLRPWRRWQPRASCWFA*QSAPCK
Trigger: TTTACACGGAGCGGATTGCAAAGCAAACCAACAAGA...AGCCCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGGCATGGAGCCCCTGTaGGGCCACTCGATGACTGGC +
Preference number: 3 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPGMEPL*GHSMTG
Trigger: GCCAGTCATCGAGTGGCCCAACAGGGGCTCCATGCC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCTTGGGAGTTCTGCATaGGTACCGCTACTGCCCTGC +
Preference number: 3 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDLGSSA*VPLLPC
Trigger: GCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTCCTGTGAAGCGTCCTaGCCAGTTTTGGATTGGGGC +
Preference number: 3 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDSCEAS*PVLDWG
Trigger: GCCCCAATCCAAAACTGGCAAGGACGCTTCACAGGA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTGGGCAACTGCCTCTTaGAGGGAGCTGCAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSWATAS*RELQVG
Trigger: CCCCACCTGCAGCTCCCTCAAAGAGGCAGTTGCCCA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCGTTCACCTTTTTAAACTaGAGGGGTTTGTCCTTGAGG +
Preference number: 3 (lower is better)
Translates to: MMERRCLGEAEASGTAGAFTFLN*RGLSLR
Trigger: CCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAA...CGCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR CCA 72 bp GGCAACACATCAGCTATTCGGCTTGCTGGCTTGGAGTaGGACTCCTGGGCTCCACTGCTTTGGGTGGCTTCT +
Preference number: 3 (lower is better)
Translates to: GNTSAIRLAGLE*DSWAPLLWVAS
Trigger: AGAAGCCACCCAAAGCAGTGGAGCCCAGGAGTCCCACTCCAAGCCAGCAAGCCGAATAGCTGATGTGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp TGCCTAGCTCTTCCAGATGCTGCACCCGGCATGCAATaGTCACTACAGTCAGCACTCTCCGCCTCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: CLALPDAAPGMQ*SLQSALSASQR
Trigger: CCTCTGAGAGGCGGAGAGTGCTGACTGTAGTGACCATTGCATGCCGGGTGCAGCATCTGGAAGAGCTAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGCGTCCTTGCCAGTTTaGGATTGGGGCTGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSASLPV*DWGWCG
Trigger: CCCACACCAGCCCCAATCCAAAACTGGCAAGGACGC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGGCCGTTGGCTAGTTaGGCACTGATGGATTGGGGG +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGPLAS*ALMDWG
Trigger: CCCCCAATCCATCAGTGCCAAACTAGCCAACGGCCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCCACCCAACAGAAGATaGTCTGCACCCGCACTGGCG +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSPPNRR*SAPALA
Trigger: CGCCAGTGCGGGTGCAGACAATCTTCTGTTGGGTGG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp GTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACTTCCTGCCGGGGCGTTaGATCACCATGACCTGGGTG +
Preference number: 3 (lower is better)
Translates to: VLRFLMGSTVSCTDRIEDFLPGR*ITMTWV
Trigger: CACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAA...GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR CAA 90 bp GTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACTTCACGGCTTTCTTTTaGGCCTCGGCGGCAGCGGCT +
Preference number: 3 (lower is better)
Translates to: VLRFLMGSTVSCTDRIEDFTAFF*ASAAAA
Trigger: AGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAA...GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR CAA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGCTTCACCACTTCCTaGACCTCGATGCTGACCGTC +
Preference number: 3 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPAGFTTS*TSMLTV
Trigger: GACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCC...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR TCA 72 bp GAGGTCACACCCCAAAACTGGGCCGGACACAGCTGGTaGGAATCCTGCAGCTTAAGGCTTTCCCTCCAACCT +
Preference number: 3 (lower is better)
Translates to: EVTPQNWAGHSW*ESCSLRLSLQP
Trigger: AGGTTGGAGGGAAAGCCTTAAGCTGCAGGATTCTCACCAGCTGTGTCCGGCCCAGTTTTGGGGTGTGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp CTAGCGCCTGGCTGTGACCAAGTATCTCCAGCTCACTaGGCTGTCAAGACCGGCAATCCCACTGGCTATGAC +
Preference number: 3 (lower is better)
Translates to: LAPGCDQVSPAH*AVKTGNPTGYD
Trigger: GTCATAGCCAGTGGGATTGCCGGTCTTGACAGCTCAGTGAGCTGGAGATACTTGGTCACAGCCAGGCGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp TGTCCCAGGTGCACTGTTCATGCTTCGGGCCTGGAATaGTGCCACCCAACAGAAGATTGTCTGCACCCGCAC +
Preference number: 3 (lower is better)
Translates to: CPRCTVHASGLE*CHPTEDCLHPH
Trigger: GTGCGGGTGCAGACAATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGCATGAACAGTGCACCTGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp ATTTGGGGCTGCTCCCTGTCCCAGGTGCACTGTTCATaGTTCGGGCCTGGAATGATGCCACCCAACAGAAGA +
Preference number: 3 (lower is better)
Translates to: IWGCSLSQVHCS*FGPGMMPPNRR
Trigger: TCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGCATGAACAGTGCACCTGGGACAGGGAGCAGCCCCAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp AAAAGCTGGGCAGAGAAGCAGGTGACAATTTGGGGCTaGTCCCTGTCCCAGGTGCACTGTTCATGCTTCGGG +
Preference number: 3 (lower is better)
Translates to: KSWAEKQVTIWG*SLSQVHCSCFG
Trigger: CCCGAAGCATGAACAGTGCACCTGGGACAGGGAGCAGCCCCAAATTGTCACCTGCTTCTCTGCCCAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp TGGGCGGGAGGGGAGGTGCCTGGTCAACAGCTTGTCTaGTCAGTAGTATCTGCAGCAAGCCTTGTTGAAGGA +
Preference number: 3 (lower is better)
Translates to: WAGGEVPGQQLV*SVVSAASLVEG
Trigger: TCCTTCAACAAGGCTTGCTGCAGATACTACTGACCAGACAAGCTGTTGACCAGGCACCTCCCCTCCCGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp TTCGAGGCCACTATGGGGGCAGGAGCCTTCTGTCCTTaGAGGAAGAGTTCTGGAGGACTCACCCTCTCTTCT +
Preference number: 3 (lower is better)
Translates to: FEATMGAGAFCP*RKSSGGLTLSS
Trigger: AGAAGAGAGGGTGAGTCCTCCAGAACTCTTCCTCCAAGGACAGAAGGCTCCTGCCCCCATAGTGGCCTCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp CCTAGTTCCCTGGGTGTTTTCCTGACACGTCAGCGCTaGGGCAGGCTCTGTCAAGATGAGAAGAGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: PSSLGVFLTRQR*GRLCQDEKSGK
Trigger: CTTCCCACTCTTCTCATCTTGACAGAGCCTGCCCCAGCGCTGACGTGTCAGGAAAACACCCAGGGAACTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp GTTCTTGAATTCAAAGGTAGGATTTCCTCCAGGGTCTaGGCTCTGCCTGTGCACAAGTCGGAGCCCGGAGCG +
Preference number: 3 (lower is better)
Translates to: VLEFKGRISSRV*ALPVHKSEPGA
Trigger: CGCTCCGGGCTCCGACTTGTGCACAGGCAGAGCCCAGACCCTGGAGGAAATCCTACCTTTGAATTCAAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp CAGCAGGTCAAGGGAGCGCTCCTGCACCCAGAACCTTaGGACCTCTTTCACAAGCACGGGAGAAACAAGAGT +
Preference number: 3 (lower is better)
Translates to: QQVKGALLHPEP*DLFHKHGRNKS
Trigger: ACTCTTGTTTCTCCCGTGCTTGTGAAAGAGGTCCCAAGGTTCTGGGTGCAGGAGCGCTCCCTTGACCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp GGGCGTCGATTTCATGTCAGTCAGAAAACACGCACGTaGACGCACGCAGACACCCACCTGTTCACGGCCAAA +
Preference number: 3 (lower is better)
Translates to: GRRFHVSQKTRT*THADTHLFTAK
Trigger: TTTGGCCGTGAACAGGTGGGTGTCTGCGTGCGTCCACGTGCGTGTTTTCTGACTGACATGAAATCGACGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp GTGTTACTGGCAATGCTGTCCATAGCTCTCGGCCTCTaGGCTGGCACAGGGGAGCATGACTTCAACTCAGGA +
Preference number: 3 (lower is better)
Translates to: VLLAMLSIALGL*AGTGEHDFNSG
Trigger: TCCTGAGTTGAAGTCATGCTCCCCTGTGCCAGCCCAGAGGCCGAGAGCTATGGACAGCATTGCCAGTAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTTGGGAGTTCTGCATaGGTACCGCTACTGCCCTGC +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLGSSA*VPLLPC
Trigger: GCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGTCCCAGCTCGGGTCTaGGGAGTTCTGCATTGGTAC +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSVPARV*GVLHWY
Trigger: GTACCAATGCAGAACTCCCAAGACCCGAGCTGGGAC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCAAGACAACACACACTaGACAGTTCATGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDQDNTH*TVHGSS
Trigger: GCTGCTGCCATGAACTGTCAAGTGTGTGTTGTCTTG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGTTGTGCTCCCTCCTaGCACTGCCCTCACACCTGC +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGCAPS*HCPHTC
Trigger: GCAGGTGTGAGGGCAGTGCAAGGAGGGAGCACAACC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp AAGCCCCTACACCACAGCTATGGACCAGACAGACAGTaGAATGTGTGGTGTTCTGGCCCCCTGTCTGCATCG +
Preference number: 3 (lower is better)
Translates to: KPLHHSYGPDRQ*NVWCSGPLSAS
Trigger: CGATGCAGACAGGGGGCCAGAACACCACACATTTCACTGTCTGTCTGGTCCATAGCTGTGGTGTAGGGGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp GCATCAACAGAAGGGAGCTGTGCTAGCGCCTGGCTGTaGCCAAGTATCTCCAGCTCACTGAGCTGTCAAGAC +
Preference number: 3 (lower is better)
Translates to: ASTEGSCASAWL*PSISSSLSCQD
Trigger: GTCTTGACAGCTCAGTGAGCTGGAGATACTTGGTCACAGCCAGGCGCTAGCACAGCTCCCTTCTGTTGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp CTTGGGAGTTCTGCATTGGTACCGCTACTGCCCTGCTaGACTACGCTAGACTCTGGACTTCTGAGTGAGGTC +
Preference number: 3 (lower is better)
Translates to: LGSSALVPLLPC*TTLDSGLLSEV
Trigger: GACCTCACTCAGAAGTCCAGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp GGTCTTGGGAGTTCTGCATTGGTACCGCTACTGCCCTaGTGCACTACGCTAGACTCTGGACTTCTGAGTGAG +
Preference number: 3 (lower is better)
Translates to: GLGSSALVPLLP*CTTLDSGLLSE
Trigger: CTCACTCAGAAGTCCAGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp CGGGTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTaGACAGATCGGATAGAAGACTCCTTCACGGCTTTC +
Preference number: 3 (lower is better)
Translates to: RVLRFLMGSTVS*TDRIEDSFTAF
Trigger: GAAAGCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR CCA 72 bp AGAGAGCCTGACTGGAATGCTCTGGAAAAGGAGCTGTaGTTAGACGGGGGACACAGAGTTCTGGCTGTCAGG +
Preference number: 3 (lower is better)
Translates to: REPDWNALEKEL*LDGGHRVLAVR
Trigger: CCTGACAGCCAGAACTCTGTGTCCCCCGTCTAACCACAGCTCCTTTTCCAGAGCATTCCAGTCAGGCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp TGCAAAACCTGGGTGCTGCCTGGAGCCTCCTTCACCTaGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAG +
Preference number: 3 (lower is better)
Translates to: CKTWVLPGASFT*HRKALERSEEK
Trigger: CTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGTGAAGGAGGCTCCAGGCAGCACCCAGGTTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp ACACGTTACAGTGTCCAGATACACGGGAGCCCAGCATaGGCAAGGGCTCGGCACACATTGAGTAACAGTCCT +
Preference number: 3 (lower is better)
Translates to: TRYSVQIHGSPA*ARARHTLSNSP
Trigger: AGGACTGTTACTCAATGTGTGCCGAGCCCTTGCCCATGCTGGGCTCCCGTGTATCTGGACACTGTAACGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp CTTGGAAAGTGGCAACACATCAGCTATTCGGCTTGCTaGCTTGGAGTGGGACTCCTGGGCTCCACTGCTTTG +
Preference number: 3 (lower is better)
Translates to: LGKWQHISYSAC*LGVGLLGSTAL
Trigger: CAAAGCAGTGGAGCCCAGGAGTCCCACTCCAAGCCAGCAAGCCGAATAGCTGATGTGTTGCCACTTTCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAGGAGCCTTCTGTCCTaGGAGGAAGAGTTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSRSLLS*EEEFWR
Trigger: CCTCCAGAACTCTTCCTCCAAGGACAGAAGGCTCCT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGGCCGTTGGCTAGTTaGGCACTGATGGATTGGGGG +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGPLAS*ALMDWG
Trigger: CCCCCAATCCATCAGTGCCAAACTAGCCAACGGCCC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp CTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACTCCTTCACGGCGCCCCCTGGCGAAGTTaGAAAAGGCATCTTGACAAG +
Preference number: 3 (lower is better)
Translates to: LDGEYGLLHRSDRRLLHGAPWRS*KRHLDK
Trigger: CTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC...GCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR GCA 72 bp ACATCATACTTCCCAGCAGAGCGGCCAGATTTCCTTTaGTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: TSYFPAERPDFL*LSFRVQPSGRV
Trigger: CACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGTTGGAGGACGTCCCTaGAGAATGGACCATGCCACC +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLVGGRP*RMDHAT
Trigger: GGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAAC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGACAGAATGGGGGTTaGGGGGCAAAGAGATTTCCA +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGQNGG*GAKRFP
Trigger: TGGAAATCTCTTTGCCCCCAAACCCCCATTCTGTCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGTCATCATACATGGGGACTTTTCTTCCGTGTaGATGGGATGGGGGAAGAAG +
Preference number: 3 (lower is better)
Translates to: LLKLPCPAFRQGGVIIHGDFSSV*MGWGKK
Trigger: CTTCTTCCCCCATCCCATCAACACGGAAGAAAAGTC...CCCATGTATGATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CAA 90 bp GTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACGCCCCCTGGCGAAGTTaGAAAAGGCATCTTGACAAG +
Preference number: 3 (lower is better)
Translates to: VLRFLMGSTVSCTDRIEDAPWRS*KRHLDK
Trigger: CTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC...GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR-3UTR CAA 90 bp ATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTCTCGTCTTAGCTGGCTCCTaGGGGCAGCCGTCGCTCTCC +
Preference number: 3 (lower is better)
Translates to: ILVGLLCNPLRVKSANSLVLAGS*GQPSLS
Trigger: GGAGAGCGACGGCTGCCCCAAGGAGCCAGCTAAGAC...GAGAGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR GCA 72 bp ACTGGATATAATCAGGGTCACCAGGAAGAACAGCTTTaGCACTTGACACACAAACACTGCGGGGAGAGGGGC +
Preference number: 3 (lower is better)
Translates to: TGYNQGHQEEQL*HLTHKHCGERG
Trigger: GCCCCTCTCCCCGCAGTGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTGGTGACCCTGATTATATCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp AAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTaGACTCCACTGTCCAGCTCCCCAGAAACACTGAAC +
Preference number: 3 (lower is better)
Translates to: KGRSRLQVLQAF*TPLSSSPETLN
Trigger: GTTCAGTGTTTCTGGGGAGCTGGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp GGAGACTGTGGATGTGGCCTTAATGACCTAGCCCCATaGGTACTGGAAAGCTGTCGGTCAATTCTGCTGTTC +
Preference number: 3 (lower is better)
Translates to: GDCGCGLNDLAP*VLESCRSILLF
Trigger: GAACAGCAGAATTGACCGACAGCTTTCCAGTACCCATGGGGCTAGGTCATTAAGGCCACATCCACAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp AACTTGAGGGGTTTGTCCTTGAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCCGTGTTGATGGGATGG +
Preference number: 3 (lower is better)
Translates to: NLRGLSLRPWRS*SSDFSSVLMGW
Trigger: CCATCCCATCAACACGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTTTATTCTTGTTGGTTaGCTTTGCAATCCGCTCCGT +
Preference number: 3 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDFILVG*LCNPLR
Trigger: ACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGCGTCCTTGCCAGTTTaGGATTGGGGCTGGTGTGGG +
Preference number: 3 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPASLPV*DWGWCG
Trigger: CCCACACCAGCCCCAATCCAAAACTGGCAAGGACGC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGTGGATAAGTGTCCTTaGGTAGTGCCAGGAGTTCGA +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSVDKCP*VVPGVR
Trigger: TCGAACTCCTGGCACTACCAAAGGACACTTATCCAC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACCACCCAACAGAAGATaGTCTGCACCCGCACTGGCG +
Preference number: 3 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEPPNRR*SAPALA
Trigger: CGCCAGTGCGGGTGCAGACAATCTTCTGTTGGGTGG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ATTAGCAAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTTTAAACTTGAGGGGTTaGTCCTTGAGGCCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: ISKLPSRCRYEHQLTLALLNLRG*SLRPWR
Trigger: CCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAA...AAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTTGCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCCTCCCCTCGGTGTTaGTACTTTTCTGCGGCCGTG +
Preference number: 3 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPSPRC*YFSAAV
Trigger: CACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTTGGCACTGATGGATaGGGGGATGTGGCGTTTCTG +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLFGTDG*GDVAFL
Trigger: CAGAAACGCCACATCCCCCAATCCATCAGTGCCAAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGCGGGAGCTGGGGGTaGTGCTCCCTCCTTGCACTG +
Preference number: 3 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKSGSWG*CSLLAL
Trigger: CAGTGCAAGGAGGGAGCACAACCCCCAGCTCCCGCT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCAGGAGCCAAACCTCTaGGCCTTTTCACCTCATCTG +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLQEPNL*AFSPHL
Trigger: CAGATGAGGTGAAAAGGCCAAGAGGTTTGGCTCCTG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp ACTGCCTCTTTGAGGGAGCTGCAGGTGGGGCCCGAATaGAATAAAGTGACGCTTGAAATGCTGTGTTCCCAA +
Preference number: 3 (lower is better)
Translates to: TASLRELQVGPE*NKVTLEMLCSQ
Trigger: TTGGGAACACAGCATTTCAAGCGTCACTTTATTTCATTCGGGCCCCACCTGCAGCTCCCTCAAAGAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp ATAATCAGGGTCACCAGGAAGAACAGCTTTGCCACTTaGCACACAAACACTGCGGGGAGAGGGGCTATCAGT +
Preference number: 3 (lower is better)
Translates to: IIRVTRKNSFAT*HTNTAGRGAIS
Trigger: ACTGATAGCCCCTCTCCCCGCAGTGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTGGTGACCCTGATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp ACGGGAGCCCAGCATGGGCAAGGGCTCGGCACACATTaGGTAACAGTCCTGGTGATATTTGGTCATATATTC +
Preference number: 3 (lower is better)
Translates to: TGAQHGQGLGTH*VTVLVIFGHIF
Trigger: GAATATATGACCAAATATCACCAGGACTGTTACTCAATGTGTGCCGAGCCCTTGCCCATGCTGGGCTCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp TCAGCAGAGTGGTGGGCTGATGGCTGCACGGGCTCATaGTTGCCCTCTTTCTCTTCTTTCTTATCTTTCTTC +
Preference number: 3 (lower is better)
Translates to: SAEWWADGCTGS*LPSFSSFLSFF
Trigger: GAAGAAAGATAAGAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCACTCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTGTCCCCTGTGTCTTTaGATATGGGAATACAGCATC +
Preference number: 3 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSCPLCL*IWEYSI
Trigger: GATGCTGTATTCCCATATCAAAAGACACAGGGGACA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp GTGTCGCCTACCTTTTCGAAGTACGCAATCAACTCCACTTTAGAGCGAAAGGCTTTAAACTTGAGGGGTTaGTCCTTGAGGCCCTGGAGG +
Preference number: 3 (lower is better)
Translates to: VSPTFSKYAINSTLERKALNLRG*SLRPWR
Trigger: CCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAA...AGCCTTTCGCTCTAAAGTGGAGTTGATTGCGTACTTCGAAAAGGTAGGCGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR GCA 72 bp TGTTTGGCCTTGGCATGGAGGATGAAACAATGTCTTTaGGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCTG +
Preference number: 3 (lower is better)
Translates to: CLALAWRMKQCL*ALPPLGVCTFL
Trigger: CAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGGCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CCA 72 bp ACAGTATTGTCAGGAGAGGAGGTAGTAACTAACAACTaGAACAAGGGTGGGGGAGACTGTGGATGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: TVLSGEEVVTNN*NKGGGDCGCGL
Trigger: AAGGCCACATCCACAGTCTCCCCCACCCTTGTTCCAGTTGTTAGTTACTACCTCCTCTCCTGACAATACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTGCAGCAAGCCTTGTaGAAGGAGCCTAGTTTAGAA +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLQQAL*KEPSLE
Trigger: TTCTAAACTAGGCTCCTTCAACAAGGCTTGCTGCAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGAGCATCTGTTTGTTTaGAAGTGGGAACATGAAGAC +
Preference number: 3 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPEHLFV*KWEHED
Trigger: GTCTTCATGTTCCCACTTCAAAACAAACAGATGCTC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCAGGAAGAACAGCTTaGCCACTTGACACACAAACA +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPGRTA*PLDTQT
Trigger: TGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCAATTCAAGCCAGTTaGCTCTCAGAGCATCTGTTT +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPIQAS*LSEHLF
Trigger: AAACAGATGCTCTGAGAGCAAACTGGCTTGAATTGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCCAATTCAAGCCAGTTaGCTCTCAGAGCATCTGTTT +
Preference number: 3 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQPIQAS*LSEHLF
Trigger: AAACAGATGCTCTGAGAGCAAACTGGCTTGAATTGG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGCATGGAGCCCCTGTaGGGCCACTCGATGACTGGC +
Preference number: 3 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGMEPL*GHSMTG
Trigger: GCCAGTCATCGAGTGGCCCAACAGGGGCTCCATGCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATGGGCTGATGGGAGTTaGGTTGCAGGACTTGCTTTT +
Preference number: 3 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEWADGS*VAGLAF
Trigger: AAAAGCAAGTCCTGCAACCAAACTCCCATCAGCCCA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGAGAAGCTGGGGCCGTaGGCTAGTTTGGCACTGATG +
Preference number: 3 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKEKLGP*ASLALM
Trigger: CATCAGTGCCAAACTAGCCAACGGCCCCAGCTTCTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGTTTGGTTGCAGGACTaGCTTTTACAGCATAAGGAA +
Preference number: 3 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQVWLQD*LLQHKE
Trigger: TTCCTTATGCTGTAAAAGCAAGTCCTGCAACCAAAC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGGAGCCTTCTGTCCTaGGAGGAAGAGTTCTGGAGG +
Preference number: 3 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKRSLLS*EEEFWR
Trigger: CCTCCAGAACTCTTCCTCCAAGGACAGAAGGCTCCT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAACCCAACTTGGCAGTTaGTGTCTGGTTATTACCCTC +
Preference number: 3 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEETQLGS*CLVITL
Trigger: GAGGGTAATAACCAGACACAAACTGCCAAGTTGGGT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACCTGCACCCAGAACCTaGGGACCTCTTTCACAAGCA +
Preference number: 3 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKPAPRT*GPLSQA
Trigger: TGCTTGTGAAAGAGGTCCCAAGGTTCTGGGTGCAGG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp CAAAATAAACATCTTCTCAGTGACAACCTGGTCGGATaGTGCGCTCTCGTGGATAAGTGTCCTTTGGTAGTG +
Preference number: 3 (lower is better)
Translates to: QNKHLLSDNLVG*CALVDKCPLVV
Trigger: CACTACCAAAGGACACTTATCCACGAGAGCGCAGCATCCGACCAGGTTGTCACTGAGAAGATGTTTATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp AAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTaGTTGGACAGAAGAAGTGACCAGCAGACAGATTTG +
Preference number: 3 (lower is better)
Translates to: KPLKEARKRPRI*LDRRSDQQTDL
Trigger: CAAATCTGTCTGCTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp TGTTCATTAGTGGTGACTTGCCCAGACCCTGCACACTaGATCAAGGTCCTGAGTTTCAAGCAACAGAAATCA +
Preference number: 3 (lower is better)
Translates to: CSLVVTCPDPAH*IKVLSFKQQKS
Trigger: TGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCACCACTAATGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
3UTR GCA 72 bp TTTCCTGTTCATAGTCTTTGTTCATTAGTGGTGACTTaGCCAGACCCTGCACACTGCATCAAGGTCCTGAGT +
Preference number: 3 (lower is better)
Translates to: FPVHSLCSLVVT*PDPAHCIKVLS
Trigger: ACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCACCACTAATGAACAAAGACTATGAACAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
3UTR CCA 72 bp CAACTGACCAAAATAAACATCTTCTCAGTGACAACCTaGTCGGATGCTGCGCTCTCGTGGATAAGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: QLTKINIFSVTT*SDAALSWISVL
Trigger: AAGGACACTTATCCACGAGAGCGCAGCATCCGACCAGGTTGTCACTGAGAAGATGTTTATTTTGGTCAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp AAACTCCTTTCTCCACCCAACTTGGCAGTTTGTGTCTaGTTATTACCCTCTTTCGCCATCACTGTCACAGCA +
Preference number: 3 (lower is better)
Translates to: KLLSPPNLAVCV*LLPSFAITVTA
Trigger: TGCTGTGACAGTGATGGCGAAAGAGGGTAATAACCAGACACAAACTGCCAAGTTGGGTGGAGAAAGGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTCTTGTTGGTTTGCTTaGCAATCCGCTCCGTGTAAA +
Preference number: 3 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPSCWFA*QSAPCK
Trigger: TTTACACGGAGCGGATTGCAAAGCAAACCAACAAGA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
3UTR-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGTGGATAAGTGTCCTTaGGTAGTGCCAGGAGTTCGA +
Preference number: 3 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLVDKCP*VVPGVR
Trigger: TCGAACTCCTGGCACTACCAAAGGACACTTATCCAC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAGACCACGAATCTGCTaGGACAGAAGAAGTGACCAG +
Preference number: 3 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLRPRIC*DRRSDQ
Trigger: CTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTCT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp CTTAGAGTTTCGGAGCTTCGTGGGAACCCTATGTGCTaGGCCCACTTTAAAACAAGCGCAGGTATATATACA +
Preference number: 3 (lower is better)
Translates to: LRVSELRGNPMC*AHFKTSAGIYT
Trigger: TGTATATATACCTGCGCTTGTTTTAAAGTGGGCTCAGCACATAGGGTTCCCACGAAGCTCCGAAACTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp GAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTaGAATCCGCTCCGTGTAAAGTCAGCTAACTCTCTC +
Preference number: 3 (lower is better)
Translates to: ETTAAFILVGLL*NPLRVKSANSL
Trigger: GAGAGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTTGGAGGACGTCCCTaGAGAATGGACCATGCCACC +
Preference number: 3 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVGGRP*RMDHAT
Trigger: GGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGTCCCAGCTCGGGTCTaGGGAGTTCTGCATTGGTAC +
Preference number: 3 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEVPARV*GVLHWY
Trigger: GTACCAATGCAGAACTCCCAAGACCCGAGCTGGGAC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGTCTCATTTGCTACTTaGATAAGGTACTTCTCAGTT +
Preference number: 3 (lower is better)
Translates to: TWHRKALERSEEKTTNLLVSFAT*IRYFSV
Trigger: AACTGAGAAGTACCTTATCAAAGTAGCAAATGAGAC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp AAACAAGAATCCACTGGGCGGAACAAAACCTGGTTTTaGAGTGACTTGGAAAGTGGCAACACATCAGCTATT +
Preference number: 3 (lower is better)
Translates to: KQESTGRNKTWF*SDLESGNTSAI
Trigger: AATAGCTGATGTGTTGCCACTTTCCAAGTCACTGCAAAACCAGGTTTTGTTCCGCCCAGTGGATTCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTATCTGCAGCAAGCCTaGTTGAAGGAGCCTAGTTTA +
Preference number: 3 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLYLQQA*LKEPSL
Trigger: TAAACTAGGCTCCTTCAACAAGGCTTGCTGCAGATA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCCTGTGAAGCGTCCTaGCCAGTTTTGGATTGGGGC +
Preference number: 3 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDISCEAS*PVLDWG
Trigger: GCCCCAATCCAAAACTGGCAAGGACGCTTCACAGGA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR GCA 72 bp TTCTTTTATGAATTTCCTTGCCCAGACCCTGCACACTaGATCAAGGTCCTGAGTTTCAAGCAACAGAAATCA +
Preference number: 3 (lower is better)
Translates to: FFYEFPCPDPAH*IKVLSFKQQKS
Trigger: TGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGGAAATTCATAAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR CCA 72 bp TATACAAATCCAGGTAGTTCTCAACACTGTCACATCTaGTGGCTTGAGGGACTAAATGTCACCAATTCAAGC +
Preference number: 3 (lower is better)
Translates to: YTNPGSSQHCHI*WLEGLNVTNSS
Trigger: GCTTGAATTGGTGACATTTAGTCCCTCAAGCCACCAGATGTGACAGTGTTGAGAACTACCTGGATTTGTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR TCA 72 bp AGAAAAACATCCCCAATGCTCCAACTACTCCCACCCTaGAGCCACGAAACTCTAAGTTTACTGAAAGAAAAA +
Preference number: 3 (lower is better)
Translates to: RKTSPMLQLLPP*SHETLSLLKEK
Trigger: TTTTTCTTTCAGTAAACTTAGAGTTTCGTGGCTTCAGGGTGGGAGTAGTTGGAGCATTGGGGATGTTTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATTTATTCTTGTTGGTTaGCTTTGCAATCCGCTCCGT +
Preference number: 3 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKFILVG*LCNPLR
Trigger: ACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCTGCAGCAAGCCTTGTaGAAGGAGCCTAGTTTAGAA +
Preference number: 3 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDILQQAL*KEPSLE
Trigger: TTCTAAACTAGGCTCCTTCAACAAGGCTTGCTGCAG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTTGTTGGTTTGCTTaGCAATCCGCTCCGTGTAAA +
Preference number: 3 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDISCWFA*QSAPCK
Trigger: TTTACACGGAGCGGATTGCAAAGCAAACCAACAAGA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTATCTGCAGCAAGCCTaGTTGAAGGAGCCTAGTTTA +
Preference number: 3 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIYLQQA*LKEPSL
Trigger: TAAACTAGGCTCCTTCAACAAGGCTTGCTGCAGATA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CCA 72 bp TGTCTCATTTGCTACTTTGATAAGGTACTTCTCAGTTaGACAGATTTAGATATAAGAGACATCTCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: CLICYFDKVLLS*TDLDIRDISVN
Trigger: GTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCAAATGAGACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGCTCGGCGGCAGCGGCTaGCACCACACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: AAAAATTLPGFRPRFLGMLGGSG*HHTPRL
Trigger: AAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCCGAG...CATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp GCCTCGGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGCTCAGCAGAGTGGTaGGCTGATGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: ASAAAAATTLPGFRPRFLGSAEW*ADGCTG
Trigger: GCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCC...CAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCCGAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CCCCTCGGTGTTTGTACTTTTCTGCGGCCGTGGCGGCGGTGGCAACCGCGGGCTTGGTGCCGCTCCCTTTaGGGCGTCCCCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLGVCTFLRPWRRWQPRAWCRSL*GVPGLC
Trigger: GCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCA...AGCCCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp GCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGCCGCCTTGGGTCTCGTaGTGCCGCTCCCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: AAAAATTLPGFRPRFLGMPPWVS*CRSLWG
Trigger: GCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGG...CATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGGTGGCCCCACCCGGCCGTGGCGGCGGTaGCAACCGCGGGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LPAGAFDHHDLGGCGGPTRPWRR*QPRAES
Trigger: AGACTCAGCCCGCGGTTGCCACCGCCGCCACGGCCG...GGTGGGGCCACCACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp CTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGGTGGCCCCACCCTCGGCGGCAGCGGCTaGCACCACACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LPAGAFDHHDLGGCGGPTLGGSG*HHTPRL
Trigger: AAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCCGAG...GGTGGGGCCACCACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGCGGGCTCAGCAGAGTaGTGGGCTGATGGCTGCACG +
Preference number: 4 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNAGSAE*WADGCT
Trigger: CGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGC...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGCACACCCTCTGACGTaGCCGCCTTGGGTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNAHPLT*PPWVSW
Trigger: CCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGC...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATTGGTGGGCTGATGGCTaGACGGGCTCATGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNWWADG*TGSCLP
Trigger: GGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCA...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp ATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCGTGGAGCGCCGCTGTTTaGGGGAGGCAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: MMERRCLGEAEASGTAGAWSAAV*GRQKLP
Trigger: CGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCA...CGCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATTGGAGCGCCGCTGTTTaGGGGAGGCAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNWSAAV*GRQKLP
Trigger: CGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCA...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp ACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCTGGTGCCGCTCCCTTTaGGGCGTCCCCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TPSRLSFWPRRQRLPPHSWCRSL*GVPGLC
Trigger: GCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCA...GGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCTGCGCCGTGGAGGCTaGCCTGGCGTGTGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWRLRRGG*PGVWSR
Trigger: CCTGCTCCACACGCCAGGCCAGCCTCCACGGCGCAG...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR CAA 72 bp GCCGGGGCGGAGCCTGACCCTTCTGATGTCTCTGCTTaGCCTGCCTCTGCGGGCTCAGCAGAGTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AGAEPDPSDVSA*PASAGSAEWWA
Trigger: AGCCCACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGAGACATCAGAAGGGTCAGGCTCCGCCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR TCA 90 bp TCCCTCCCCTCGGTGTTTGTACTTTTCTGCGGCCGTGGCGGCGGTGGCAACCGCGCCGTCGCTCTCCAGTaGGCCTCCTCTGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: SLPSVFVLFCGRGGGGNRAVALQ*ASSGHL
Trigger: AAGATGCCCAGAGGAGGCTCACTGGAGAGCGACGGC...GCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp CTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGGTGGCCCCACCCCTTGGGTCTCGTGGTaGCGCTCCCTTTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LPAGAFDHHDLGGCGGPTPWVSW*RSLWGV
Trigger: GACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGG...GGTGGGGCCACCACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATCCCGTTTCTTGGGAATaGCCTGAGGGTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNPVSWE*PEGRPQ
Trigger: CTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGG...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGGTGGCCCCACCGGTGGTGCTCCTTCTTaGGGGGTGAGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPAGAFDHHDLGGCGGPTGGAPS*GVRRRC
Trigger: GCAGCGCCTCCTCACCCCCCAAGAAGGAGCACCACC...GGTGGGGCCACCACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR CAA 72 bp CCGAGGGTGGACACCAGCAGGGGCTTCACCACTTCCTaGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGC +
Preference number: 4 (lower is better)
Translates to: PRVDTSRGFTTS*TSMLTVSRVLR
Trigger: GCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCCCCTGCTGGTGTCCACCCTCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp GCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGGGTCTTGCGCTTCTTaGTGGGGAGTACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AAAAATTLPGFRPRFLGMGSCAS*WGVRSP
Trigger: AGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCC...CATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp TCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCCCGTGGCAACCGCGGGCTaGGTCTTAGCTGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SFTAFFLASAAAAATTLPVATAG*VLAGSL
Trigger: CAAGGAGCCAGCTAAGACTCAGCCCGCGGTTGCCAC...GGGGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp CGGGCTCAGCAGAGTGGTGGGCTGATGGCTGCACGGGCTCATGCTTGCCCTCTTTGGTGGGCTGATGGCTaGACGGGCTCATGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: RAQQSGGLMAARAHACPLWWADG*TGSCLP
Trigger: GGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCA...AAGAGGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp AGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCTGACGTGGCCGCCTTaGGTCTCGTGGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RLLHGFLFGLGGSGCHHTLTWPP*VSWCRS
Trigger: GGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAG...AGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCCGTGGAGGCTGGCCTaGCGTGTGGAGCAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWRPWRLA*RVEQAE
Trigger: TTCTGCCTGCTCCACACGCCAGGCCAGCCTCCACGG...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR TCA 90 bp CAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGCCTGGGTCTTGCGCTTCTTaGTGGGGAGTACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QRLPPHSPAFGPVSWEWPGSCAS*WGVRSP
Trigger: AGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCC...AGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp CAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGCCTGACTCTGAGTGGTGGTaGTGGTGGTGGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QRLPPHSPAFGPVSWEWPDSEWW*WWWCSF
Trigger: GAAGGAGCACCACCACCATCACCACCACTCAGAGTC...AGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCGCCATCCAGCGAGCTaGGAAGCTGGGGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDRHPAS*EAGAVG
Trigger: GCCAACGGCCCCAGCTTCTCAGCTCGCTGGATGGCG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGCTCCCCAGAAACACTaGACCGGGTGGGCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDAPQKH*TGWAPL
Trigger: GAGCGGGGCCCACCCGGTTCAGTGTTTCTGGGGAGC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCGGAGCCGGCCAGATTTCCTTTaGTTAAGCTTCCGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WSAAVWGRQKLPAQPGRSRPDFL*LSFRVQ
Trigger: CTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCG...GCTCCGCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp ATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCGTTGTCCTTGAGGCCCTaGAGGTCCTGGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: MMERRCLGEAEASGTAGALSLRP*RSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAA...CGCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp AGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTGGCTCAGCAGAGTGGTaGGCTGATGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: RLLHGFLFGLGGSGCHHTGSAEW*ADGCTG
Trigger: GCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCC...AGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp GGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCCCGCCTTGGGTCTCGTaGTGCCGCTCCCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GLLQVFSPFPLFSPRVDTPPWVS*CRSLWG
Trigger: GCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGG...GGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCGCCTTGGGTCTCGTaGTGCCGCTCCCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPPWVS*CRSLWG
Trigger: GCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATTTGATCACCATGACCTaGGTGGATGTGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNLITMT*VDVVAP
Trigger: TGGGGCCACCACATCCACCCAGGTCATGGTGATCAA...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGGTGGCCCCACCTTCGGCCCCGTTTCTTaGGAATGGCCTGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: LPAGAFDHHDLGGCGGPTFGPVS*EWPEGR
Trigger: CCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGAA...GGTGGGGCCACCACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTTGTCACGGCTTTCTTTTTaGCCTCGGCGGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: LSRSRASGCPQAPLCLALSRLSF*PRRQRL
Trigger: CAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGA...CAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp ACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCGGGCTGAGTCTTAGCTaGCTCCTTGGGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TPSRLSFWPRRQRLPPHSGLSLS*LLGAAV
Trigger: GACGGCTGCCCCAAGGAGCCAGCTAAGACTCAGCCC...GGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAACACACGCCGGAGCTaGCCCCGGATGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDNTRRS*PRMWAQ
Trigger: CTGGGCCCACATCCGGGGCCAGCTCCGGCGTGTGTT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCTGGCCTGGCGTGTGGGGCTGGCCTGGCGTGTaGAGCAGGCAGAACATTAGC +
Preference number: 4 (lower is better)
Translates to: GLLTFLPWLRRGGWPGVWGWPGV*SRQNIS
Trigger: GCTAATGTTCTGCCTGCTCCACACGCCAGGCCAGCC...CCACACGCCAGGCCAGCCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR TCA 90 bp TCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGGGCTTCAGTCCCCGGTCACGGATaGTGGAGCGCCGCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SSVLSRSSHRGWTPAGASVPGHG*WSAAVW
Trigger: CCAAACAGCGGCGCTCCATCATCCGTGACCGGGGAC...TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp GAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCGGAGCCTGAGGTCCTGGTCTTCTaGCTTTTCTTCCGTGTTGAT +
Preference number: 4 (lower is better)
Translates to: ERRCLGEAEASGTAGAEPEVLVF*LFFRVD
Trigger: ATCAACACGGAAGAAAAGTCAGAAGACCAGGACCTC...AGGCTCCGCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGGCGTCCCCGGCCTCTaGCAGTTCCTGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDGVPGL*QFLELW
Trigger: CCAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCTCCTCGCCTCCTCTaGCCCTATCCCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPPRLL*PYPRLG
Trigger: ACCCAGCCTGGGATAGGGGCAGAGGAGGCGAGGAGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGGCTCAGCAGAGTGGTaGGCTGATGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: AARFPLLKLPCPAFRQGGGSAEW*ADGCTG
Trigger: GCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCC...CCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp CTTGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACGCGGGCTCAGCAGAGTaGTGGGCTGATGGCTGCACG +
Preference number: 4 (lower is better)
Translates to: LDLDADRLPGLALLDGEYAGSAE*WADGCT
Trigger: CGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGC...GTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp TCGGCCCCGTTTCTTGGGAATGGCCTGAGGGTCGGCCTCAGCTTTTCGCTTCCTTGGAGCGCCGCTGTTTaGGGGAGGCAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SAPFLGNGLRVGLSFSLPWSAAV*GRQKLP
Trigger: CGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCA...AGGAAGCGAAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CTTGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACGCACACCCTCTGACGTaGCCGCCTTGGGTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LDLDADRLPGLALLDGEYAHPLT*PPWVSW
Trigger: CCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGC...GTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp ACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCTCACGGCTTTCTTTTTaGCCTCGGCGGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: TPSRLSFWPRRQRLPPHSSRLSF*PRRQRL
Trigger: CAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGA...GGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTTGTCTTCTCACCGAGGGTaGACACCAGCAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSRSRASGCPQAPLCLALSSHRG*TPAGAS
Trigger: TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGA...CAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCTGTCCCAACGTGGTTaGGAGTGGGGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDLSQRG*EWGRWG
Trigger: CCCCCACCTCCCCCACTCCCAACCACGTTGGGACAG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCTGACTTTTCTTCCCTaGCTGCGCCGTGGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWRLTFLP*LRRGGW
Trigger: CCAGCCTCCACGGCGCAGCCAGGGAAGAAAAGTCAG...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR TCA 90 bp CTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGGTGGCCCCACCGAGGTCCTGGTCTTCTaGCTTTTCTTCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPAGAFDHHDLGGCGGPTEVLVF*LFFPEP
Trigger: GGGCTCAGGGAAGAAAAGTCAGAAGACCAGGACCTC...GGTGGGGCCACCACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGTGGCAACCGCGGGCTaGGTCTTAGCTGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDVATAG*VLAGSL
Trigger: CAAGGAGCCAGCTAAGACTCAGCCCGCGGTTGCCAC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCTCCTCTTGGACTCCTaGCCTCCGCCTACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWRLLLDS*PPPTKR
Trigger: TCTCTTCGTAGGCGGAGGTCAGGAGTCCAAGAGGAG...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR TCA 90 bp GGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCTGGCCTGGCGTGTGGGGGCAGCAGATGTGTTaGTGGGATGGGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GLLTFLPWLRRGGWPGVWGQQMC*WDGGRR
Trigger: TCTTCTTCCCCCATCCCATCAACACATCTGCTGCCC...CCACACGCCAGGCCAGCCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR TCA 90 bp GGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCTGGCCTGGCGTGTGGGAGACAGCGAGACTCTaGGCCCTAACATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: GLLTFLPWLRRGGWPGVWETARL*ALTSQL
Trigger: TAGCTGGGATGTTAGGGCTCAGAGTCTCGCTGTCTC...CCACACGCCAGGCCAGCCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTGGTGGGCTGATGGCTaGACGGGCTCATGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDWWADG*TGSCLP
Trigger: GGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGCCTTGGGTCTCGTGGTaGCGCTCCCTTTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LQVFSPFPLFSPRVDTSRPWVSW*RSLWGV
Trigger: GACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGG...CCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTCGGCGGCAGCGGCTaGCACCACACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLGGSG*HHTPRL
Trigger: AAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCCGAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTCTGGGCTCTGCCTGTaGACAAGTCGGAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDSGLCL*TSRSPE
Trigger: CTCCGGGCTCCGACTTGTGCACAGGCAGAGCCCAGA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCGGCGTCCCCGGCCTCTaGCAGTTCCTGGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GLLQVFSPFPLFSPRVDTGVPGL*QFLELF
Trigger: GAAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCC...GGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTTGTTGTCCTTGAGGCCCTaGAGGTCCTGGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LSRSRASGCPQAPLCLALLSLRP*RSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAA...CAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp CTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACTCCTTCACGGCACTTTTCTGCGGCCGTaGCGGCGGTGGCAACCGCGG +
Preference number: 4 (lower is better)
Translates to: LDGEYGLLHRSDRRLLHGTFLRP*RRWQPR
Trigger: CCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGT...GCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTCCAGCTCCCAGAGGTaGAAGGCGACCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDSSSQR*KATRLC
Trigger: GCACAGCCTGGTCGCCTTCCACCTCTGGGAGCTGGA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp AGGCAGAGTTCTGGGGACTGGAGCCGACAAGTGTGGTaGGGCACCGCGGCTGCCTGGAAGAGAAGGGATGAA +
Preference number: 4 (lower is better)
Translates to: RQSSGDWSRQVW*GTAAAWKRRDE
Trigger: TTCATCCCTTCTCTTCCAGGCAGCCGCGGTGCCCAACCACACTTGTCGGCTCCAGTCCCCAGAACTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp GCTTCCGCCATCCAGCGAGCTGAGAAGCTGGGGCCGTaGGCTAGTTTGGCACTGATGGATTGGGGGATGTGG +
Preference number: 4 (lower is better)
Translates to: ASAIQRAEKLGP*ASLALMDWGMW
Trigger: CCACATCCCCCAATCCATCAGTGCCAAACTAGCCAACGGCCCCAGCTTCTCAGCTCGCTGGATGGCGGAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGTCCCCGGTCACGGATaGTGGAGCGCCGCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPAVPGHG*WSAAVW
Trigger: CCAAACAGCGGCGCTCCATCATCCGTGACCGGGGAC...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp ACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGCACCTGCACACCCTCTaGCGTGGCCGCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TDRIEDSFTAFFLASAAAHLHTL*RGRLGS
Trigger: AGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGGTG...CGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp AGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTGACTCTGAGTGGTGGTaGTGGTGGTGGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RLLHGFLFGLGGSGCHHTDSEWW*WWWCSF
Trigger: GAAGGAGCACCACCACCATCACCACCACTCAGAGTC...AGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCTTACCAGGACCAGATaGCGCCCAGGTGACGGGGAA +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDLTRTR*RPGDGE
Trigger: TTCCCCGTCACCTGGGCGTCATCTGGTCCTGGTAAG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTGCTTTGCCTGCCTCTaGGGGCTCAGCAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDCFACL*GLSRVV
Trigger: CACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CTTGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACTGGGGCTGCTCTCCTTaGTTTTCCGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LDLDADRLPGLALLDGEYWGCSP*FSAQGS
Trigger: AGAGCCCTGGGCGGAAAAGCAAGGAGAGCAGCCCCA...GTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp CGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGCCTCTTTGCAGACGCTaGTGCTCAAGTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RLPGLALLDGEYGLLHRSPLCRR*CSSPGA
Trigger: AGCCCCAGGACTTGAGCAGCAGCGTCTGCAAAGAGG...CGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGGGCAGCATGAGAGCTaGAGGGCCCCTGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPGQHES*RAPACQ
Trigger: CTGGCAGGCAGGGGCCCTGCAGCTCTCATGCTGCCC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCAGCCTTCAGGCAGGGTaGGGTCATCATACATGGGTC +
Preference number: 4 (lower is better)
Translates to: TPSRLSFWPRRQRLPPHSSLQAG*GHHTWV
Trigger: GACCCATGTATGATGACCCCACCCTGCCTGAAGGCT...GGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACCGCCTTGGGTCTCGTaGTGCCGCTCCCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPPPWVS*CRSLWG
Trigger: GCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACTGACGTGGCCGCCTTaGGTCTCGTGGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLTWPP*VSWCRS
Trigger: GGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCCGTTTCTTGGGAATaGCCTGAGGGTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPVSWE*PEGRPQ
Trigger: CTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGGGCTTCACCCGTTTCTTGGGAATaGCCTGAGGGTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSVLSRSSHRGWTPAGASPVSWE*PEGRPQ
Trigger: CTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGG...TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGTGGTGCTCCTTCTTaGGGGGTGAGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPAGGAPS*GVRRRC
Trigger: GCAGCGCCTCCTCACCCCCCAAGAAGGAGCACCACC...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGGGCTCAAAACAGGGTaGGGCTGGTACTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDGLKTG*GWYWQQ
Trigger: CTGCTGCCAGTACCAGCCCCACCCTGTTTTGAGCCC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTGTCTGCACCCGCACTaGCGCTCACGAGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDCLHPH*RSRVAA
Trigger: AGCTGCTACTCGTGAGCGCCAGTGCGGGTGCAGACA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGCAGGCAGGGGGCCTTaGGGAGGCAGTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPAGRGP*GGSERP
Trigger: TGGCCTCTCACTGCCTCCCCAAGGCCCCCTGCCTGC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGCAGGCAGGGGGCCTTaGGGAGGCAGTGAGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSAGRGP*GGSERP
Trigger: TGGCCTCTCACTGCCTCCCCAAGGCCCCCTGCCTGC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAAGGCTGCCCCAGCCCTaGTCCTCCGAAGGGCTCACG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPRLPQP*SSEGLT
Trigger: CGTGAGCCCTTCGGAGGACCAGGGCTGGGGCAGCCT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAAACACACGCCGGAGCTaGCCCCGGATGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPNTRRS*PRMWAQ
Trigger: CTGGGCCCACATCCGGGGCCAGCTCCGGCGTGTGTT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGCTTTGGGTGGCTTCTaGCTGATCTGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDALGGF*LIWAGV
Trigger: GACCCCTGCCCAGATCAGCCAGAAGCCACCCAAAGC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTTGCTTTTCCCTGGCTGCGCCGTaGAGGCTGGCCTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: KLPSRCRYEHQLTLALCFSLAAP*RLAWRV
Trigger: CACACGCCAGGCCAGCCTCCACGGCGCAGCCAGGGA...AAAGCAAAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR CAA 72 bp GGGGGCTACCTAGGAGAGCAAGACCTTGCTGCTCTCTaGCTCTTCACAGACAGGCCAGGTCGGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GGYLGEQDLAAL*LFTDRPGRTQQ
Trigger: CTGCTGAGTCCGACCTGGCCTGTCTGTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCTAGGTAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp GGTACTGGTCCCAGCTCGGGTCTTGGGAGTTCTGCATaGGTACCGCTACTGCCCTGCTGCACTACGCTAGAC +
Preference number: 4 (lower is better)
Translates to: GTGPSSGLGSSA*VPLLPCCTTLD
Trigger: GTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCCGAGCTGGGACCAGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp CTGGTCGGATGCTGCGCTCTCGTGGATAAGTGTCCTTaGGTAGTGCCAGGAGTTCGAGGCCACTATGGGGGC +
Preference number: 4 (lower is better)
Translates to: LVGCCALVDKCP*VVPGVRGHYGG
Trigger: GCCCCCATAGTGGCCTCGAACTCCTGGCACTACCAAAGGACACTTATCCACGAGAGCGCAGCATCCGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp TGCTTCGGGCCTGGAATGATGCCACCCAACAGAAGATaGTCTGCACCCGCACTGGCGCTCACGAGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: CFGPGMMPPNRR*SAPALALTSSS
Trigger: GCTGCTACTCGTGAGCGCCAGTGCGGGTGCAGACAATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp ACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTaGGCCTCGGCGGCAGCGGCTGCCACCACACTCCCC +
Preference number: 4 (lower is better)
Translates to: TDRIEDSFTAFF*ASAAAAATTLP
Trigger: GGGGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR CAA 72 bp GAAACAATGTCTTTGCGCTCTCCCTCCCCTCGGTGTTaGTACTTTTCTGCGGCCGTGGCGGCGGTGGCAACC +
Preference number: 4 (lower is better)
Translates to: ETMSLRSPSPRC*YFSAAVAAVAT
Trigger: GGTTGCCACCGCCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp TACTTCCCAGCAGAGCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTGTCCCCGGTCACGGATaGTGGAGCGCCGCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: YFPAERPDFLCLSFRVQPVPGHG*WSAAVW
Trigger: CCAAACAGCGGCGCTCCATCATCCGTGACCGGGGAC...AGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR TCA 90 bp CTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTTGGCTTTGAAAAGGCATCTTaGCAAGGAGCTTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LSVTGVRLSTGSSLFGLGFEKAS*QGASQD
Trigger: GTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAA...GCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGACTCTGAGTGGTGGTaGTGGTGGTGGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDDSEWW*WWWCSF
Trigger: GAAGGAGCACCACCACCATCACCACCACTCAGAGTC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCACATGGGCTCACCCTaGCCAGGTCACGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSHMGSP*PGHGKG
Trigger: CCCCTTCCCGTGACCTGGTCAGGGTGAGCCCATGTG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACACATGGGCTCACCCTaGCCAGGTCACGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPHMGSP*PGHGKG
Trigger: CCCCTTCCCGTGACCTGGTCAGGGTGAGCCCATGTG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTGGCTGCACGGGCTCATaGTTGCCCTCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: RLLHGFLFGLGGSGCHHTGCTGS*LPSFSS
Trigger: AGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCC...AGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp CAGGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACATGCTTTGCCTGCCTCTaGGGGCTCAGCAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: QGSYRSSVLSRSSHRGWTCFACL*GLSRVV
Trigger: CACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCA...TGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp CTTGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACTGTCTCTGCTTTGCCTaGCTCTGCGGGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LDLDADRLPGLALLDGEYCLCFA*LCGLSR
Trigger: TCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGAGACA...GTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCTCGGCGGCAGCGGCTaGCACCACACTCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLGGSG*HHTPRL
Trigger: AAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCCGAG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCGGGAGTACGGTCTCCTaGACAGATCGGATAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TPSRLSFWPRRQRLPPHSGSTVS*TDRIED
Trigger: GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCC...GGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp GCTAACTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGGGGAGTACGGTCTCCTaGACAGATCGGATAGAAGAC +
Preference number: 4 (lower is better)
Translates to: ANSLGHGRPAVHRLLSVWGSTVS*TDRIED
Trigger: GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCC...CCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp TCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCCCGCATCTTCTCCTCTTTaGAGACGCTGCTGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: SFTAFFLASAAAAATTLPASSPL*RRCCSS
Trigger: ACTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGC...GGGGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp TCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCCCATGAAACAATGTCTTTaGGCTCTCCCTCCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SFTAFFLASAAAAATTLPMKQCL*ALPPLG
Trigger: ACCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCAT...GGGGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGTGGGCAAGGCAGGCTaGCCCTCAGGCAGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPVGKAG*PSGRSA
Trigger: GGCACTTCTGCCTGAGGGGCAGCCTGCCTTGCCCAC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGTTGTGCTCCCTCCTTaGACTGCCCTCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDVVLPP*TALTPA
Trigger: AGCAGGTGTGAGGGCAGTGCAAGGAGGGAGCACAAC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCCTCCTCGCCTCCTCTaGCCCTATCCCAGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSPPRLL*PYPRLG
Trigger: ACCCAGCCTGGGATAGGGGCAGAGGAGGCGAGGAGG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCCGGGGCGAGTCTGTATTTTTATaGAGCAGTCTCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: DDGAPLFGGGRSFRHSRGESVFL*SSLSSS
Trigger: CGAGGAGGAGAGACTGCTCCATAAAAATACAGACTC...GCCCCGGCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp GTCACGGATGATGGAGCGCCGCTGTTTGGGGGAGGCAGAAGCTTCCGGCACAGCACATCCCAGCTACCATaGAATCCTGTTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VTDDGAPLFGGGRSFRHSTSQLP*NPVGAG
Trigger: ACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGT...GCTGTGCCGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCATCATCCGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGCTCAGCAGAGTGGTaGGCTGATGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGSAEW*ADGCTG
Trigger: GCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGCGGGCTCAGCAGAGTaGTGGGCTGATGGCTGCACG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPAGSAE*WADGCT
Trigger: CGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTTTGATCACCATGACCTaGGTGGATGTGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RLLHGFLFGLGGSGCHHTLITMT*VDVVAP
Trigger: TGGGGCCACCACATCCACCCAGGTCATGGTGATCAA...AGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGGTGGTGCTCCTTCTTaGGGGGTGAGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPGGAPS*GVRRRC
Trigger: GCAGCGCCTCCTCACCCCCCAAGAAGGAGCACCACC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACTGTCCCAACGTGGTTaGGAGTGGGGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLSQRG*EWGRWG
Trigger: CCCCCACCTCCCCCACTCCCAACCACGTTGGGACAG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCACACTCGGACCCTACTaGCAGGGAGGCCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSTLGPY*QGGLRG
Trigger: GCCTCGCAGGCCTCCCTGCCAGTAGGGTCCGAGTGT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCTCCACTGCTTTGGGTaGCTTCTGGCTGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDLHCFG*LLADLG
Trigger: GCCCAGATCAGCCAGAAGCCACCCAAAGCAGTGGAG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAAGCCTCCTGCTTGGGTaGGCCCAGCCCCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPSLLLG*AQPHSP
Trigger: GGGAGAATGGGGCTGGGCCCACCCAAGCAGGAGGCT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGACTTTTCACCTGCACACCCTCTaGCGTGGCCGCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: APWRSLKRHLDKELPRTFHLHTL*RGRLGS
Trigger: AGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGGTG...AAAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp AAGTCAGCTAACTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTCCCCCTGGCGAAGTTTaGAAAGGCATCTTGACAAGG +
Preference number: 4 (lower is better)
Translates to: KSANSLGHGRPAVHRLLSPPGEV*KGILTR
Trigger: CCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGG...AGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAGCTGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp CTTGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACTTCTTGGGAATGGCCTaGGGGTCGGCCTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LDLDADRLPGLALLDGEYFLGMA*GSASAF
Trigger: AAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAA...GTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGCCGTCGCTCTCCAGTaGGCCTCCTCTGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPAVALQ*ASSGHL
Trigger: AAGATGCCCAGAGGAGGCTCACTGGAGAGCGACGGC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGCTTCGGGCCTGGAATaGTGCCACCCAACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDASGLE*CHPTED
Trigger: ATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGGAGGCCTGCGAGGCTaGCTCCACATGGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLGGLRG*LHMGSP
Trigger: GGGTGAGCCCATGTGGAGTCAGCCTCGCAGGCCTCC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGAGGCCTGCGAGGCTaGCTCCACATGGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGGLRG*LHMGSP
Trigger: GGGTGAGCCCATGTGGAGTCAGCCTCGCAGGCCTCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTGGTGGGCTGATGGCTaGACGGGCTCATGCTTGCCC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSWWADG*TGSCLP
Trigger: GGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGTGCTTTGCCTGCCTCTaGGGGCTCAGCAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: TDRIEDSFTAFFLASAAACFACL*GLSRVV
Trigger: CACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCA...CGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp ACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGTGGGGCTGCTCTCCTTaGTTTTCCGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TDRIEDSFTAFFLASAAAWGCSP*FSAQGS
Trigger: AGAGCCCTGGGCGGAAAAGCAAGGAGAGCAGCCCCA...CGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAAGAGGCTGGGCAACTaGCTCTTTGAGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDKRLGN*LFEGAA
Trigger: TGCAGCTCCCTCAAAGAGGCAGTTGCCCAGCCTCTT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTGGAGCGCCGCTGTTTaGGGGAGGCAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSWSAAV*GRQKLP
Trigger: CGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TCGGCCCCGTTTCTTGGGAATGGCCTGAGGGTCGGCCTCAGCTTTTCGCTTCCTCTCAGCCTTGCCCCCTaGCGAAGTTTGAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SAPFLGNGLRVGLSFSLPLSLAP*RSLKRH
Trigger: ATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCTGAG...AGGAAGCGAAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp TGTCTTTGCGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCTGCGGCCGTGGCGGCTCAGCCTTGCCCCCTaGCGAAGTTTGAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: CLCALPPLGVCTFLRPWRLSLAP*RSLKRH
Trigger: ATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCTGAG...CCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCATTCGGCCCCGTTTCTTaGGAATGGCCTGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPAFGPVS*EWPEGR
Trigger: CCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGAA...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTTCTCAGTGACAACCTaGTCGGATGCTGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDFSVTT*SDAALS
Trigger: CGAGAGCGCAGCATCCGACCAGGTTGTCACTGAGAA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCAACTGGAACAAGGGTaGGGGAGACTGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDQLEQG*GRLWMW
Trigger: CCACATCCACAGTCTCCCCCACCCTTGTTCCAGTTG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGGAGCCTCCTTCACCTaGCACAGGAAAGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDGASFT*HRKALE
Trigger: TTCAAGGGCTTTCCTGTGCCAGGTGAAGGAGGCTCC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTCCAGCTCCCAGAGGTaGAAGGCGACCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSSSSQR*KATRLC
Trigger: GCACAGCCTGGTCGCCTTCCACCTCTGGGAGCTGGA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAGTCTTCACTACTCCTaGAGGGGACCCCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDSLHYS*RGPLGL
Trigger: CAGTCCAAGGGGTCCCCTCCAGGAGTAGTGAAGACT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAGCTATTCGGCTTGCTaGCTTGGAGTGGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDSYSAC*LGVGLL
Trigger: CAGGAGTCCCACTCCAAGCCAGCAAGCCGAATAGCT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCCTTCTGCACAGGGTaGCCTGTGTTACTGGCAATG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPFCTG*PVLLAM
Trigger: CATTGCCAGTAACACAGGCCACCCTGTGCAGAAGGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp GCCACTTTCCTGTCCTGTGAAGCGTCCTTGCCAGTTTaGGATTGGGGCTGGTGTGGGGCCAGACTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: ATFLSCEASLPV*DWGWCGARLEP
Trigger: TGGCTCAAGTCTGGCCCCACACCAGCCCCAATCCAAAACTGGCAAGGACGCTTCACAGGACAGGAAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp ATCCAGCGAGCTGAGAAGCTGGGGCCGTTGGCTAGTTaGGCACTGATGGATTGGGGGATGTGGCGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: IQRAEKLGPLAS*ALMDWGMWRFW
Trigger: CCAGAAACGCCACATCCCCCAATCCATCAGTGCCAAACTAGCCAACGGCCCCAGCTTCTCAGCTCGCTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp GGGAGAGGGGCTATCAGTGGGCAGGAGCCAAACCTCTaGGCCTTTTCACCTCATCTGCTCTCACTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRGAISGQEPNL*AFSPHLLSLLS
Trigger: GCTCAGCAGTGAGAGCAGATGAGGTGAAAAGGCCAAGAGGTTTGGCTCCTGCCCACTGATAGCCCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp ACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCCTGCACAGATCGGATA +
Preference number: 4 (lower is better)
Translates to: TSMLTVSRVLRF*MGSTVSCTDRI
Trigger: TATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
3UTR CAA 72 bp ACTTCCTTGACCTCGATGCTGACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACA +
Preference number: 4 (lower is better)
Translates to: TSLTSMLTVSRV*RFLMGSTVSCT
Trigger: TGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAGGAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGTCCCCGGTCACGGATaGTGGAGCGCCGCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLVPGHG*WSAAVW
Trigger: CCAAACAGCGGCGCTCCATCATCCGTGACCGGGGAC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCACCTGCACACCCTCTaGCGTGGCCGCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLHLHTL*RGRLGS
Trigger: AGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGGTG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCCCCTGGCGAAGTTTaGAAAGGCATCTTGACAAGG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPPGEV*KGILTR
Trigger: CCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGTGTGGGGCCAGACTTaGGCCACCACGGGTGGGATC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLVWGQT*ATTGGI
Trigger: GATCCCACCCGTGGTGGCTCAAGTCTGGCCCCACAC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGGGCAACTGCCTCTTTaGGGGAGCTGCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLGQLPL*GSCRWG
Trigger: GCCCCACCTGCAGCTCCCTCAAAGAGGCAGTTGCCC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGGCAGAGAAGCAGGTaGCAATTTGGGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGQRSR*QFGAAP
Trigger: GGGAGCAGCCCCAAATTGTCACCTGCTTCTCTGCCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTCAGAAGGCTCAGCTaGTCCGAGGCGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLRRLS*SEASRA
Trigger: TGCTCTGCTCGCCTCGGATCAGCTGAGCCTTCTGAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATACAGAGTGGGAAGGATaGAACACACTCGGACCCTAC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDTEWEG*NTLGPY
Trigger: GTAGGGTCCGAGTGTGTTTCATCCTTCCCACTCTGT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCTCAGAAGAAGCAATaGCAGCAGGGAGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPQKKQ*QQGGKL
Trigger: AAGCTTCCCTCCCTGCTGTCATTGCTTCTTCTGAGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTGACTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGCTCCCTCCTGGGTCCTaGGCCCTAACATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: VTCPDPAHCIKVLSFKQQLPPGS*ALTSQL
Trigger: TAGCTGGGATGTTAGGGCTCAGGACCCAGGAGGGAG...CTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR GCA 90 bp AGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGTCATCTGCTTTGCCTGCCTCTaGGGGCTCAGCAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RFPLLKLPCPAFRQGGVICFACL*GLSRVV
Trigger: CACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCA...GATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCCTTGGGTCTCGTGGTaGCGCTCCCTTTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQPWVSW*RSLWGV
Trigger: GACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGTGTTTGTACTTTTCTaGGGCCGTGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPVFVLF*GRGGGG
Trigger: GCCACCGCCGCCACGGCCGCAGAAAAGTACAAACAC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCAGGTGCACTGTTCATaGTTCGGGCCTGGAATGATG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDQVHCS*FGPGMM
Trigger: CATCATTCCAGGCCCGAAGCATGAACAGTGCACCTG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGCTCCCTGTCCCAGGTaGACTGTTCATGCTTCGGGC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSAPCPR*TVHASG
Trigger: GCCCGAAGCATGAACAGTGCACCTGGGACAGGGAGC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGGAGCTGGGGGTTGTaGTCCCTCCTTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGSWGL*SLLALP
Trigger: GGGCAGTGCAAGGAGGGAGCACAACCCCCAGCTCCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGACTTTTGGCGTCCCCGGCCTCTaGCAGTTCCTGGAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: APWRSLKRHLDKELPRTFGVPGL*QFLELF
Trigger: GAAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCC...AAAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CGGGCTCAGCAGAGTGGTGGGCTGATGGCTGCACGGGCTCATGCTTGCCCTCTTAAGCAAGGTGTATTCTaGGGAGTCACATGTCACATC +
Preference number: 4 (lower is better)
Translates to: RAQQSGGLMAARAHACPLKQGVF*GVTCHI
Trigger: GATGTGACATGTGACTCCCCAGAATACACCTTGCTT...AAGAGGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp AGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTACATCCCAGCTACCATaGAATCCTGTTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLLHGFLFGLGGSGCHHTTSQLP*NPVGAG
Trigger: ACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGT...AGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp GGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GLLQVFSPFPLFSPRVDTRPWRS*SSDFSS
Trigger: GGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT...GGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDRPWRS*SSDFSS
Trigger: GGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGCTCAGCAGAGTGGTaGGCTGATGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGSAEW*ADGCTG
Trigger: GCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGCGGGCTCAGCAGAGTaGTGGGCTGATGGCTGCACG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQAGSAE*WADGCT
Trigger: CGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TCAGCTTTTCGCTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGAGCCTTCAGGCAGGGTaGGGTCATCATACATGGGTC +
Preference number: 4 (lower is better)
Translates to: SAFRFLPGRLITMTWVDVSLQAG*GHHTWV
Trigger: GACCCATGTATGATGACCCCACCCTGCCTGAAGGCT...CACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAGCGAAAAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGGTGCCGCTCCCTTTaGGGCGTCCCCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPWCRSL*GVPGLC
Trigger: GCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGCACACCCTCTGACGTaGCCGCCTTGGGTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLAHPLT*PPWVSW
Trigger: CCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CCA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCATCTTCTCACCGAGGGTaGACACCAGCAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPASSHRG*TPAGAS
Trigger: TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGA...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGGAGGGGAGGTGCCTaGTCAACAGCTTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGRGGA*STACLV
Trigger: GACCAGACAAGCTGTTGACCAGGCACCTCCCCTCCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTTGAGCCACCACGGGTaGGATCGCACAGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLSHHG*DRTGHS
Trigger: GCTATGGCCTGTGCGATCCCACCCGTGGTGGCTCAA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTTGGGAGTTCTGCATTaGTACCGCTACTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDLGVLH*YRYCPA
Trigger: AGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAATGACCTAGCCCCATaGGTACTGGAAAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDNDLAP*VLESCR
Trigger: CCGACAGCTTTCCAGTACCCATGGGGCTAGGTCATT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCATGTCTGCACCCGCACTaGCGCTCACGAGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPCLHPH*RSRVAA
Trigger: AGCTGCTACTCGTGAGCGCCAGTGCGGGTGCAGACA...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAGCCTCCTGCTTGGGTaGGCCCAGCCCCATTCTCCC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQSLLLG*AQPHSP
Trigger: GGGAGAATGGGGCTGGGCCCACCCAAGCAGGAGGCT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGGCTGTCAGGTGTTTTaGGAGCCCAAAACCATGCCT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDGCQVF*EPKTMP
Trigger: AGGCATGGTTTTGGGCTCCCAAAACACCTGACAGCC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TACTTCCCAGCAGAGCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTGCTGCTTCTCCCTCCTaGGTCCTGGAACGACAGGCT +
Preference number: 4 (lower is better)
Translates to: YFPAERPDFLCLSFRVQPAASPS*VLERQA
Trigger: AGCCTGTCGTTCCAGGACCCAGGAGGGAGAAGCAGC...AGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp GGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCGCCTCTGCCAGTTCCTaGAGCTTTTCGAAGTACGCA +
Preference number: 4 (lower is better)
Translates to: GLLQVFSPFPLFSPRVDTASASS*SFSKYA
Trigger: TGCGTACTTCGAAAAGCTCCAGGAACTGGCAGAGGC...GGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp GGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCTGGCCTGGCGTGTGGTCACAAAGGAGTTCTTaGGCAGCAGATGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GLLTFLPWLRRGGWPGVWSQRSS*AADVLM
Trigger: CATCAACACATCTGCTGCCCAAGAACTCCTTTGTGA...CCACACGCCAGGCCAGCCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR CAA 72 bp AGCCATGTCCTCAGGTCGGCTACCTCCAGATTCCCCTaGCCTGTAATGCTCACCAGGCATCTCAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SHVLRSATSRFP*PVMLTRHLRPS
Trigger: ACTTGGCCTGAGATGCCTGGTGAGCATTACAGGCAAGGGGAATCTGGAGGTAGCCGACCTGAGGACATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp GTGACTTGGAAAGTGGCAACACATCAGCTATTCGGCTaGCTGGCTTGGAGTGGGACTCCTGGGCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: VTWKVATHQLFG*LAWSGTPGLHC
Trigger: GCAGTGGAGCCCAGGAGTCCCACTCCAAGCCAGCAAGCCGAATAGCTGATGTGTTGCCACTTTCCAAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp GCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTaGGCATGGAGGATGAAACAATGTCTTTGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: ASGCPQAPLCLA*AWRMKQCLCAL
Trigger: GAGAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
3UTR CAA 72 bp TCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTaGGCCTTGGCATGGAGGATGAAACAATGTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SRASGCPQAPLC*ALAWRMKQCLC
Trigger: GCAAAGACATTGTTTCATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp TCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCCCCAAAGCAGGAACTGGTaGGTCTGTATTTTTATGGAG +
Preference number: 4 (lower is better)
Translates to: SFTAFFLASAAAAATTLPQSRNW*VCIFME
Trigger: CTCCATAAAAATACAGACTCACCAGTTCCTGCTTTG...GGGGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGTGGCAACCGCGGGCTaGGTCTTAGCTGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLVATAG*VLAGSL
Trigger: CAAGGAGCCAGCTAAGACTCAGCCCGCGGTTGCCAC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGGGCTTCACCTTGGCATGGAGGATaGAACAATGTCTTTGCGCTC +
Preference number: 4 (lower is better)
Translates to: SSVLSRSSHRGWTPAGASPWHGG*NNVFAL
Trigger: GAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGG...TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATGTTGGGCCACTCGATaGCTGGCAGGCCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLCWATR*LAGHRR
Trigger: CCTCCTGTGGCCTGCCAGTCATCGAGTGGCCCAACA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGAGATGTCACAGTGTTaGGCCCTGGAGGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSEMSQC*ALEDGV
Trigger: CACCCCATCCTCCAGGGCTCAACACTGTGACATCTC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTTGCTGGCGATCGGGTaGCAGCCAAGAGAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLLAIG*QPRECK
Trigger: CTTGCACTCTCTTGGCTGTCACCCGATCGCCAGCAA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCATTCTTAGGTGGTTTCTaGTCTCGCCGGGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPFLGGF*SRREGL
Trigger: GAGCCCCTCCCGGCGAGAGCAGAAACCACCTAAGAA...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATATGAAACAATGTCTTTaGGCTCTCCCTCCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDMKQCL*ALPPLG
Trigger: ACCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCAT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCCTTGTTATTCTTGTTGGTTTaGTTTGCAATCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LSRSRASGCPQAPLCLALLFLLV*FAIRSV
Trigger: CACGGAGCGGATTGCAAAGCAAACCAACAAGAATAA...CAAGGCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCCAGGCCAGCCTGCCTaGACCTTGTCCTACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQPGQPA*TLSYCL
Trigger: GAGGCAGTAGGACAAGGTGCAGGCAGGCTGGCCTGG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGACCCCAGGCCAGCCTaGCTGCACCTTGTCCTACTG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLDPRPA*LHLVLL
Trigger: CAGTAGGACAAGGTGCAGGCAGGCTGGCCTGGGGTC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGGCAGCATGAGAGCTaGAGGGCCCCTGCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGQHES*RAPACQ
Trigger: CTGGCAGGCAGGGGCCCTGCAGCTCTCATGCTGCCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCCCCTCAGGCAGAAGTaGCTTCCTAGTTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSPLRQK*LPSSLG
Trigger: ACCCAGGGAACTAGGAAGGCACTTCTGCCTGAGGGG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACCCCTCAGGCAGAAGTaGCTTCCTAGTTCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPPLRQK*LPSSLG
Trigger: ACCCAGGGAACTAGGAAGGCACTTCTGCCTGAGGGG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCACTGCCCTCACACCTaGTTCCTTCTGCCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSHCPHT*FLLPPD
Trigger: GTCAGGAGGCAGAAGGAAGCAGGTGTGAGGGCAGTG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGCAAAACCTGGGTGCTaGCTGGAGCCTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSAKPGC*LEPPSP
Trigger: AGGTGAAGGAGGCTCCAGGCAGCACCCAGGTTTTGC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGAGCCAGCTCCCTTCTaGACAGGGTGGCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSEPAPF*TGWPVL
Trigger: TAACACAGGCCACCCTGTGCAGAAGGGAGCTGGCTC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CTAACTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTGTTTGGCGAGTCTGTATTTTTATaGAGCAGTCTCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: LTLSVTGVRLSTGSSLFGESVFL*SSLSSS
Trigger: CGAGGAGGAGAGACTGCTCCATAAAAATACAGACTC...GCCAAACAGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATACATCCCAGCTACCATaGAATCCTGTTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDTSQLP*NPVGAG
Trigger: ACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303391.11
CDS-3UTR CCA 90 bp GTGTCGCCTACCTTTTCGAAGTACGCAATCAACTCCACTTTAGAGCGAAAGGCTGCGGGCTCAGCAGAGTaGTGGGCTGATGGCTGCACG +
Preference number: 4 (lower is better)
Translates to: VSPTFSKYAINSTLERKAAGSAE*WADGCT
Trigger: CGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCGC...AGCCTTTCGCTCTAAAGTGGAGTTGATTGCGTACTTCGAAAAGGTAGGCGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTGGAGCGCCGCTGTTTaGGGGAGGCAGAAGCTTCCG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLWSAAV*GRQKLP
Trigger: CGGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGGTGGCCCCACCCGAAAGGCTTTTCCCTaGGGATTGATCAAATACACA +
Preference number: 4 (lower is better)
Translates to: LPAGAFDHHDLGGCGGPTRKAFP*GLIKYT
Trigger: TGTGTATTTGATCAATCCCCAGGGAAAAGCCTTTCG...GGTGGGGCCACCACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp GCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGACTTTTTGCTGCTGCGCCCCTTaGGGCTGCTCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: APWRSLKRHLDKELPRTFCCCAP*GCSPCF
Trigger: AAAGCAAGGAGAGCAGCCCCAAGGGGCGCAGCAGCA...AAAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AGCCTTGCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGCCAGTGAGCCTCCTCTaGGCATCTTCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SLAPWRSLKRHLDKELPRPVSLL*ASSPLC
Trigger: GCAAAGAGGAGAAGATGCCCAGAGGAGGCTCACTGG...CCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTCCCTGTCCCAACGTaGTTGGGAGTGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLPVPT*LGVGEV
Trigger: CACCTCCCCCACTCCCAACCACGTTGGGACAGGGAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACAAGAGTGCAAAACCTaGGTGCTGCCTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPQECKT*VLPGAS
Trigger: GGAGGCTCCAGGCAGCACCCAGGTTTTGCACTCTTG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACAGAAAACACGCACGTaGACGCACGCAGACACCCAC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPQKTRT*THADTH
Trigger: GTGGGTGTCTGCGTGCGTCCACGTGCGTGTTTTCTG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTTGGAGTGGGACTCCTaGGCTCCACTGCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLEWDS*APLLWV
Trigger: CACCCAAAGCAGTGGAGCCCAGGAGTCCCACTCCAA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCACCTGCACACCCTCTaGCGTGGCCGCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPHLHTL*RGRLGS
Trigger: AGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGGTG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGATCAGGGATTGGGCTaGTGGGAGTTTGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSDQGLG*WEFGCR
Trigger: CCTGCAACCAAACTCCCATCAGCCCAATCCCTGATC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTGGCACAGGGGAGCATaGCTTCAACTCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQWHRGA*LQLRRG
Trigger: CCCCCTCCTGAGTTGAAGTCATGCTCCCCTGTGCCA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GACTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAACTCCTCTTGGACTCCTaGCCTCCGCCTACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: DLPRPCTLHQGPEFQATELLLDS*PPPTKR
Trigger: TCTCTTCGTAGGCGGAGGTCAGGAGTCCAAGAGGAG...TTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR TCA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGACTGCATCAAGGTCCTaGGTTTCAAGCAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWRTASRS*VSSNRN
Trigger: ATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGT...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR TCA 90 bp AAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTTGCTTTGAGCAGGTGCAGGTATaGACATCAGCTGACGCTGGC +
Preference number: 4 (lower is better)
Translates to: KLPSRCRYEHQLTLALCFEQVQV*TSADAG
Trigger: GCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTC...AAAGCAAAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR GCA 90 bp GCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGACTTTTTGTCTCTGCTTTGCCTaGCTCTGCGGGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: APWRSLKRHLDKELPRTFCLCFA*LCGLSR
Trigger: TCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGAGACA...AAAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGCGTCCCCGGCCTCTaGCAGTTCCTGGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGVPGL*QFLELW
Trigger: CCAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCTTGGGTCTCGTGGTaGCGCTCCCTTTGGGGCGTC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPWVSW*RSLWGV
Trigger: GACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTGGGGCTGCTCTCCTTaGTTTTCCGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLWGCSP*FSAQGS
Trigger: AGAGCCCTGGGCGGAAAAGCAAGGAGAGCAGCCCCA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATGCAGGGCCCCTGCCTaGCAGGGCGATAAACCGCCA +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEECRAPA*QGDKPP
Trigger: TGGCGGTTTATCGCCCTGGCAGGCAGGGGCCCTGCA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCCAGCTCTTCAGCTCTaGACACACACATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSPALQL*THTSPP
Trigger: AGGAGGGGATGTGTGTGTGCAGAGCTGAAGAGCTGG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAGCGTCCCAGCCTCCTaGTTGGGTGGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSVPAS*LGGPSP
Trigger: GGGGCTGGGCCCACCCAAGCAGGAGGCTGGGACGCT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGTCATCATACATGGGAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLKLPCPAFRQGGVIIHGRPWRS*SSDFSS
Trigger: GGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT...CCCATGTATGATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPARPWRS*SSDFSS
Trigger: GGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTTGTCCTTGAGGCCCTaGAGGTCCTGGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLSLRP*RSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGTCATCAGCCTTCAGGCAGGGTaGGGTCATCATACATGGGTC +
Preference number: 4 (lower is better)
Translates to: RFPLLKLPCPAFRQGGVISLQAG*GHHTWV
Trigger: GACCCATGTATGATGACCCCACCCTGCCTGAAGGCT...GATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGGTGCCGCTCCCTTTaGGGCGTCCCCGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLWCRSL*GVPGLC
Trigger: GCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTCGGCCCCGTTTCTTaGGAATGGCCTGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLFGPVS*EWPEGR
Trigger: CCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACCAGTGAGCCTCCTCTaGGCATCTTCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPPVSLL*ASSPLC
Trigger: GCAAAGAGGAGAAGATGCCCAGAGGAGGCTCACTGG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCACTGTCACATCTGGTaGCTTGAGGGACTAAATGTC +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDHCHIW*LEGLNV
Trigger: GACATTTAGTCCCTCAAGCCACCAGATGTGACAGTG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGCCGACAAGTGTGGTTaGGCACCGCGGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPADKCG*APRLPG
Trigger: TCCAGGCAGCCGCGGTGCCCAACCACACTTGTCGGC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGGAGCCGACAAGTGTaGTTGGGCACCGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPWSRQV*LGTAAA
Trigger: GGCAGCCGCGGTGCCCAACCACACTTGTCGGCTCCA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGGCTCAAAACAGGGTaGGGCTGGTACTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGLKTG*GWYWQQ
Trigger: CTGCTGCCAGTACCAGCCCCACCCTGTTTTGAGCCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGGCCACTCGATGACTaGCAGGCCACAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGPLDD*QATGGL
Trigger: GAGGCCTCCTGTGGCCTGCCAGTCATCGAGTGGCCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCATGGATTGGGGGATGTaGCGTTTCTGGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSMDWGM*RFWVSP
Trigger: AGGGGACACCCAGAAACGCCACATCCCCCAATCCAT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAACCTGGGTGCTGCCTaGAGCCTCCTTCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQNLGAA*SLLHLA
Trigger: TGCCAGGTGAAGGAGGCTCCAGGCAGCACCCAGGTT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCCTGGCGTTCTACCTaGTGCAGCTCACAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPWRST*CSSQVP
Trigger: CGGAACCTGTGAGCTGCACCAGGTAGAACGCCAGGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACACGGGAGCCCAGCATaGGCAAGGGCTCGGCACACA +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEHGSPA*ARARHT
Trigger: TGTGTGCCGAGCCCTTGCCCATGCTGGGCTCCCGTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGCCTCTGCCAGTTCCTaGAGCTTTTCGAAGTACGCA +
Preference number: 4 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPAASASS*SFSKYA
Trigger: TGCGTACTTCGAAAAGCTCCAGGAACTGGCAGAGGC...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp TCATTAGTGGTGACTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCGCTGCTTCTCCCTCCTaGGTCCTGAGCCCTAACATC +
Preference number: 4 (lower is better)
Translates to: SLVVTCPDPAHCIKVLSFAASPS*VLSPNI
Trigger: GATGTTAGGGCTCAGGACCCAGGAGGGAGAAGCAGC...GAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCACCACTAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR TCA 90 bp TTCAGGCAGGGTGGGGTCATCATACATGGGTCCCCGGTCACGGATGATGGAGCGCAAAGCAGGAACTGGTaGGTCTGTATTTTTATGGAG +
Preference number: 4 (lower is better)
Translates to: FRQGGVIIHGSPVTDDGAQSRNW*VCIFME
Trigger: CTCCATAAAAATACAGACTCACCAGTTCCTGCTTTG...CGCTCCATCATCCGTGACCGGGGACCCATGTATGATGACCCCACCCTGCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGCCGTCGCTCTCCAGTaGGCCTCCTCTGGGCATCTT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEAVALQ*ASSGHL
Trigger: AAGATGCCCAGAGGAGGCTCACTGGAGAGCGACGGC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACTCTGGACTTCTGAGTaGGGTCAAGGTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLWTSE*GQGRLA
Trigger: TGCCAGCCGACCTTGACCTCACTCAGAAGTCCAGAG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAGATGACGCCCAGGTaGCGGGGAAGCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEQMTPR*RGSSSG
Trigger: TCCAGAGCTGCTTCCCCGTCACCTGGGCGTCATCTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGTATCTCCAGCTCACTaGGCTGTCAAGACCGGCAAT +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPVSPAH*AVKTGN
Trigger: ATTGCCGGTCTTGACAGCTCAGTGAGCTGGAGATAC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGCTAGCGCCTGGCTGTaGCCAAGTATCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQASAWL*PSISSS
Trigger: TGAGCTGGAGATACTTGGTCACAGCCAGGCGCTAGC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACCCTGGGTGTTTTCCTaGCACGTCAGCGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEPWVFS*HVSAGA
Trigger: TGCCCCAGCGCTGACGTGTCAGGAAAACACCCAGGG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGATGGGGTGGGATGTaGCGGAAGTGTCTTAAACAG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGWGGM*RKCLKQ
Trigger: CTGTTTAAGACACTTCCGTCACATCCCACCCCATCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGAGATGTCACAGTGTTaGGCCCTGGAGGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLEMSQC*ALEDGV
Trigger: CACCCCATCCTCCAGGGCTCAACACTGTGACATCTC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGACTTTTGGCTGCACGGGCTCATaGTTGCCCTCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: APWRSLKRHLDKELPRTFGCTGS*LPSFSS
Trigger: AGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCC...AAAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCTCTTTGCAGACGCTaGTGCTCAAGTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPLCRR*CSSPGA
Trigger: AGCCCCAGGACTTGAGCAGCAGCGTCTGCAAAGAGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCCTCTTTGCAGACGCTaGTGCTCAAGTCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQPLCRR*CSSPGA
Trigger: AGCCCCAGGACTTGAGCAGCAGCGTCTGCAAAGAGG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCCTTGTTGGTTTGCTTTaGAATCCGCTCCGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: GLLQVFSPFPLFSPRVDTLVGLL*NPLRVK
Trigger: CTTTACACGGAGCGGATTGCAAAGCAAACCAACAAG...GGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACCTGTGAAGCGTCCTTaGCAGTTTTGGATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPPVKRP*QFWIGA
Trigger: AGCCCCAATCCAAAACTGGCAAGGACGCTTCACAGG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCGCTCGTATCCCTCTaGTCCCTCCTGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPLVSL*SLLGLS
Trigger: GCTCAAGCCCAGGAGGGAGCAGAGGGATACGAGCGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACCGCTCGTATCCCTCTaGTCCCTCCTGGGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEPLVSL*SLLGLS
Trigger: GCTCAAGCCCAGGAGGGAGCAGAGGGATACGAGCGG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGCAAAACCTGGGTGCTaGCTGGAGCCTCCTTCACCT +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLAKPGC*LEPPSP
Trigger: AGGTGAAGGAGGCTCCAGGCAGCACCCAGGTTTTGC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAAGGCGACCAGGCTGTaGCGACTACGTTCCGGACTT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQKATRL*RLRSGL
Trigger: AAGTCCGGAACGTAGTCGGCACAGCCTGGTCGCCTT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGTTCTGCAAGCCTTTTaGACTCCACTGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPVLQAF*TPLSSS
Trigger: GGAGCTGGACAGTGGAGTGCAAAAGGCTTGCAGAAC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTACTCCTGGGCTCCACTaGTTTGGGTGGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLTPGLH*FGWLLA
Trigger: AGCCAGAAGCCACCCAAAGCAGTGGAGCCCAGGAGT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCATCAGCTATTCGGCTTaGTGGCTTGGAGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSISYSA*WLGVGL
Trigger: GAGTCCCACTCCAAGCCAGCAAGCCGAATAGCTGAT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGCGTCCCAGCCTCCTaGTTGGGTGGGCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKSVPAS*LGGPSP
Trigger: GGGGCTGGGCCCACCCAAGCAGGAGGCTGGGACGCT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTTCCCTGGGGATTGATCAAATACACATCATACTTCCCAGCAGAGCGGCCAGATACTTCCCCTGGCAGCTaGTTCTCCCTCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FPWGLIKYTSYFPAERPDTSPGS*FSLLGP
Trigger: AGGACCCAGGAGGGAGAAGCAGCTGCCAGGGGAAGT...ATCTGGCCGCTCTGCTGGGAAGTATGATGTGTATTTGATCAATCCCCAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR GCA 90 bp CCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACTACTTCCCCTGGCAGCTaGTTCTCCCTCCTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PDPAHCIKVLSFKQQKSTTSPGS*FSLLGP
Trigger: AGGACCCAGGAGGGAGAAGCAGCTGCCAGGGGAAGT...AGTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674996.1
ENST00000675526.1
CDS-3UTR CCA 90 bp GCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGACTTTTTTGTCCTTGAGGCCCTaGAGGTCCTGGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: APWRSLKRHLDKELPRTFLSLRP*RSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAA...AAAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTTTGGGCTTCTTAGGTaGTTTCTGCTCTCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSFGLLR*FLLSPG
Trigger: TCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTCAGCCTTGCCCCCTaGCGAAGTTTGAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLSLAP*RSLKRH
Trigger: ATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCTGAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATCTTCTCACCGAGGGTaGACACCAGCAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLSSHRG*TPAGAS
Trigger: TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGGCTGAGTCTTAGCTaGCTCCTTGGGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGLSLS*LLGAAV
Trigger: GACGGCTGCCCCAAGGAGCCAGCTAAGACTCAGCCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCTCCCTGTCCCAACGTaGTTGGGAGTGGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPLPVPT*LGVGEV
Trigger: CACCTCCCCCACTCCCAACCACGTTGGGACAGGGAG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGCCATCCTCTCCTGTaGTTCAGGCCAGTCTACACC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGHPLL*FRPVYT
Trigger: GGTGTAGACTGGCCTGAACCACAGGAGAGGATGGCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCAACACTGTCACATCTaGTGGCTTGAGGGACTAAAT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDQHCHI*WLEGLN
Trigger: ATTTAGTCCCTCAAGCCACCAGATGTGACAGTGTTG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAAGTTTCGGAGCTTCGTaGGAACCCTATGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPSFGAS*EPYVLS
Trigger: GCTCAGCACATAGGGTTCCCACGAAGCTCCGAAACT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGCACCGCGGCTGCCTaGAAGAGAAGGGATGAACTA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGTAAA*KRRDEL
Trigger: TAGTTCATCCCTTCTCTTCCAGGCAGCCGCGGTGCC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGCTCGTTGTTCAGGGTaGGAAATGCCTTTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDARCSG*EMPFAF
Trigger: AAAAGCAAAAGGCATTTCCCACCCTGAACAACGAGC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGAGGTCAAGGTCGGCTaGCATGGAGCCCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPEVKVG*HGAPVG
Trigger: CCCAACAGGGGCTCCATGCCAGCCGACCTTGACCTC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGGATGTGGCGTTTCTaGGTGTCCCCTGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGMWRF*VSPVSF
Trigger: AAAAGACACAGGGGACACCCAGAAACGCCACATCCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACTGGAAAAGGAGCTGTaGTTAGACGGGGGACACAGA +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLEKEL*LDGGHR
Trigger: TCTGTGTCCCCCGTCTAACCACAGCTCCTTTTCCAG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGCCCCTATCCCAGGCTaGGTGGGAAAGAGCATCATG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLAPIPG*VGKSIM
Trigger: CATGATGCTCTTTCCCACCCAGCCTGGGATAGGGGC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATTGGAGTGGGACTCCTaGGCTCCACTGCTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLEWDS*APLLWV
Trigger: CACCCAAAGCAGTGGAGCCCAGGAGTCCCACTCCAA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CACATCATACTTCCCAGCAGAGCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCTCCCTCCTGGGTCCTaGAACGACAGGCTTGAGAAC +
Preference number: 4 (lower is better)
Translates to: HIILPSRAARFPLLKLPCLPPGS*NDRLEN
Trigger: GTTCTCAAGCCTGTCGTTCCAGGACCCAGGAGGGAG...ACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTATGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
3UTR CAA 72 bp GCAGAGTGGTGGGCTGATGGCTGCACGGGCTCATGCTaGCCCTCTTTCTCTTCTTTCTTATCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: AEWWADGCTGSC*PSFSSFLSFFT
Trigger: GGTGAAGAAAGATAAGAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCACTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCTGACTTTTCTTCCCTaGGCCCTAACATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSLTFLP*ALTSQL
Trigger: TAGCTGGGATGTTAGGGCTCAGGGAAGAAAAGTCAG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303391.11
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGAGGTCCTGGTCTTCTaGCTTTTCTTCCCTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQEVLVF*LFFPEP
Trigger: GGGCTCAGGGAAGAAAAGTCAGAAGACCAGGACCTC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303391.11
CDS-3UTR TCA 90 bp AGCCTTGCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGTTTGAAAAGGCATCTTaGCAAGGAGCTTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLAPWRSLKRHLDKELPRFEKAS*QGASQD
Trigger: GTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAA...CCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACCTTGGCATGGAGGATaGAACAATGTCTTTGCGCTC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPPWHGG*NNVFAL
Trigger: GAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTTGGAGGACGTCCCTTaGGAATGGACCATGCCACCT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLEDVP*EWTMPP
Trigger: AGGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGGAACCCTATGTGCTaGGCCCACTTTAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGNPMC*AHFKTS
Trigger: GCTTGTTTTAAAGTGGGCTCAGCACATAGGGTTCCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGGGCAACTGCCTCTTTaGGGGAGCTGCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLGQLPL*GSCRWG
Trigger: GCCCCACCTGCAGCTCCCTCAAAGAGGCAGTTGCCC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTGCTGAAAGGCGACTaGCTCGTGATGCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLLKGD*LVMPLG
Trigger: TCCCAAAGGCATCACGAGTCAGTCGCCTTTCAGCAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTTCCAGGTCACTGGTaGACGCTCCACCTTCCATAC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLPGHW*TLHLPY
Trigger: GTATGGAAGGTGGAGCGTTCACCAGTGACCTGGAAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCAGGCTCTGTCAAGATaGGAAGAGTGGGAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQQALSR*EEWEGG
Trigger: CCCTCCTTCCCACTCTTCTCATCTTGACAGAGCCTG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGCACAGGAAAGCCCTTaGAAGAAGCGAGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSAQESP*KKRGKD
Trigger: GTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAAGGGCAGCAGATGTGTTaGTGGGATGGGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TCPDPAHCIKVLSFKQQKGQQMC*WDGGRR
Trigger: TCTTCTTCCCCCATCCCATCAACACATCTGCTGCCC...TTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR TCA 90 bp TGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAGAGGTCCTGGTCTTCTaGCTTTTCTTCCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CPDPAHCIKVLSFKQQKSEVLVF*LFFPGC
Trigger: GCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTC...TGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGCTGCACGGGCTCATaGTTGCCCTCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGCTGS*LPSFSS
Trigger: AGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCGGCCAGATTTCCTTTaGTTAAGCTTCCGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSRPDFL*LSFRVQ
Trigger: CTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACCGGCCAGATTTCCTTTaGTTAAGCTTCCGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VLRFLMGSTVSCTDRIEDRPDFL*LSFRVQ
Trigger: CTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCG...GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGAGTGTCCTCTCAACTaGTCTGTCGCTCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPECPLN*SVALSL
Trigger: TAGAGACAGAGCGACAGAGCAGTTGAGAGGACACTC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAGGAGAGCAAGACCTTaGTGCTCTCTTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSRRARP*CSLALH
Trigger: GTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGTACCGCTACTGCCCTaGTGCACTACGCTAGACTCT +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLVPLLP*CTTLDS
Trigger: AGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTAC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAGTGCAAAACCTGGGTaGTGCCTGGAGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLSAKPG*CLEPPS
Trigger: TGAAGGAGGCTCCAGGCAGCACCCAGGTTTTGCACT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAGCTCTTCCAGATGCTaGACCCGGCATGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQSSSRC*TRHAMV
Trigger: GACCATTGCATGCCGGGTGCAGCATCTGGAAGAGCT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTGACGTGGCCGCCTTaGGTCTCGTGGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLTWPP*VSWCRS
Trigger: GGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTCTGACGTGGCCGCCTTaGGTCTCGTGGTGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: FILVGLLCNPLRVKSANSLTWPP*VSWCRS
Trigger: GGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAG...AGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATTGATCACCATGACCTaGGTGGATGTGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLITMT*VDVVAP
Trigger: TGGGGCCACCACATCCACCCAGGTCATGGTGATCAA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTGATCACCATGACCTaGGTGGATGTGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLITMT*VDVVAP
Trigger: TGGGGCCACCACATCCACCCAGGTCATGGTGATCAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTTCGGCCCCGTTTCTTaGGAATGGCCTGAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPFGPVS*EWPEGR
Trigger: CCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGAA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATCACGGCTTTCTTTTTaGCCTCGGCGGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEESRLSF*PRRQRL
Trigger: CAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAACTTTTCTGCGGCCGTaGCGGCGGTGGCAACCGCGG +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKTFLRP*RRWQPR
Trigger: CCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTGCCAGTTTTGGATTaGGGCTGGTGTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLPVLD*GWCGAR
Trigger: TCTGGCCCCACACCAGCCCCAATCCAAAACTGGCAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATTGCCAGTTTTGGATTaGGGCTGGTGTGGGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLPVLD*GWCGAR
Trigger: TCTGGCCCCACACCAGCCCCAATCCAAAACTGGCAA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCAGAGTTCTGGGGACTaGAGCCGACAAGTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLQSSGD*SRQVWL
Trigger: CAACCACACTTGTCGGCTCCAGTCCCCAGAACTCTG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATCCCAGCTCGGGTCTTaGGAGTTCTGCATTGGTACC +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLSQLGS*EFCIGT
Trigger: GGTACCAATGCAGAACTCCCAAGACCCGAGCTGGGA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTCTCAGTGACAACCTaGTCGGATGCTGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLFSVTT*SDAALS
Trigger: CGAGAGCGCAGCATCCGACCAGGTTGTCACTGAGAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGAAGGGAAAGAGGCTaGGCAACTGCCTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGRERG*ATASLR
Trigger: CCTCAAAGAGGCAGTTGCCCAGCCTCTTTCCCTTCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACAACTGGAACAAGGGTaGGGGAGACTGTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLQLEQG*GRLWMW
Trigger: CCACATCCACAGTCTCCCCCACCCTTGTTCCAGTTG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAACCTGTAACCTCCCCTaGCCCAGTCAGCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEETCNLP*PSQPRE
Trigger: CTCTCTGGGCTGACTGGGCCAGGGGAGGTTACAGGT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGACCTGTAACCTCCCCTaGCCCAGTCAGCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPTCNLP*PSQPRE
Trigger: CTCTCTGGGCTGACTGGGCCAGGGGAGGTTACAGGT...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGAAGGAGGGTGGTGCTaGGCCTTCCAGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPEGGWC*AFQVTG
Trigger: ACCAGTGACCTGGAAGGCCCAGCACCACCCTCCTTC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAGGAGCCAAACCTCTTaGCCTTTTCACCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSRSQTS*PFHLIC
Trigger: GCAGATGAGGTGAAAAGGCCAAGAGGTTTGGCTCCT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGAGGCTGACTCCACATaGGCTCACCCTGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPEADST*AHPDQV
Trigger: GACCTGGTCAGGGTGAGCCCATGTGGAGTCAGCCTC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCCTGGCGTTCTACCTaGTGCAGCTCACAGGTTCCG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPWRST*CSSQVP
Trigger: CGGAACCTGTGAGCTGCACCAGGTAGAACGCCAGGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCTGGAGGGGACCCCTTaGACTGACGCACATGATTCT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLEGTP*TDAHDS
Trigger: AGAATCATGTGCGTCAGTCCAAGGGGTCCCCTCCAG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGCTTCTGGCTGATCTaGGCAGGGGTCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGFWLI*AGVICS
Trigger: TGAACAGATGACCCCTGCCCAGATCAGCCAGAAGCC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGCTTCTGGCTGATCTaGGCAGGGGTCATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGFWLI*AGVICS
Trigger: TGAACAGATGACCCCTGCCCAGATCAGCCAGAAGCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGCTTTGGGTGGCTTCTaGCTGATCTGGGCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPALGGF*LIWAGV
Trigger: GACCCCTGCCCAGATCAGCCAGAAGCCACCCAAAGC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCACGGGGCACACCTTaGAGAGAGAATGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPRGTP*RENAHH
Trigger: GTGGTGGGCATTCTCTCTCCAAGGTGTGCCCCGTGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGCACCCGGCATGCAATaGTCACTACAGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQAPGMQ*SLQSAL
Trigger: GAGTGCTGACTGTAGTGACCATTGCATGCCGGGTGC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTAGGGTCCAGGGATGTGTCGCCTACCTTTTCGAAGTACGCAATCAACTCCACTTCTGCTCACTCCTCTTaGACTCCTGACCTCCGCCTA +
Preference number: 4 (lower is better)
Translates to: LGSRDVSPTFSKYAINSTSAHSS*TPDLRL
Trigger: TAGGCGGAGGTCAGGAGTCCAAGAGGAGTGAGCAGA...AGTGGAGTTGATTGCGTACTTCGAAAAGGTAGGCGACACATCCCTGGACCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp TGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCATCTGCTCACTCCTCTTaGACTCCTGACCTCCGCCTA +
Preference number: 4 (lower is better)
Translates to: CPDPAHCIKVLSFKQQKSSAHSS*TPDLRL
Trigger: TAGGCGGAGGTCAGGAGTCCAAGAGGAGTGAGCAGA...TGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674996.1
ENST00000675526.1
CDS-3UTR TCA 90 bp GTCTCCTGCACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCCTCGCTGACTTTTCTTCCCTaGGCCCTAACATCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: VSCTDRIEDSFTAFFLASLTFLP*ALTSQL
Trigger: TAGCTGGGATGTTAGGGCTCAGGGAAGAAAAGTCAG...CGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTTTGAAAAGGCATCTTaGCAAGGAGCTTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSFEKAS*QGASQD
Trigger: GTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCTCTGGACTTCTGAGTaGGGTCAAGGTCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPLWTSE*GQGRLA
Trigger: TGCCAGCCGACCTTGACCTCACTCAGAAGTCCAGAG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGACCAGACAGACAGTaGAATGTGTGGTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGPDRQ*NVWCSG
Trigger: GCCAGAACACCACACATTTCACTGTCTGTCTGGTCC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACCCATCGGCCCTGAATaGACTGTCATGGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEPIGPE*TVMGDR
Trigger: CCTGTCACCCATGACAGTTCATTCAGGGCCGATGGG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAAAGGCGACTGACTCGTaGTGCCTTTGGGAAAGACGA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLKATDS*CLWERR
Trigger: TCGTCTTTCCCAAAGGCATCACGAGTCAGTCGCCTT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAATCCCACTGGCTATaGCAAGCCCACCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEQSHWL*QAHQQA
Trigger: TGCCTGCTGGTGGGCTTGTCATAGCCAGTGGGATTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCAATCCCACTGGCTATaGCAAGCCCACCAGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPQSHWL*QAHQQA
Trigger: TGCCTGCTGGTGGGCTTGTCATAGCCAGTGGGATTG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGTATCTCCAGCTCACTaGGCTGTCAAGACCGGCAAT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQVSPAH*AVKTGN
Trigger: ATTGCCGGTCTTGACAGCTCAGTGAGCTGGAGATAC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGCTAGCGCCTGGCTGTaGCCAAGTATCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPASAWL*PSISSS
Trigger: TGAGCTGGAGATACTTGGTCACAGCCAGGCGCTAGC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATATCCATTTGGGGCAATaGCACAGGCTAAAAATGTAT +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDIHLGQ*HRLKMY
Trigger: ATACATTTTTAGCCTGTGTCATTGCCCCAAATGGAT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAAACAGCTGACTCCCTaGAGTCTAGGACACAGGTCC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLKQLTP*SLGHRS
Trigger: GGACCTGTGTCCTAGACTTCAGGGAGTCAGCTGTTT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACTGCTGAGCAGGACCTaGTTAAAGGTAGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLLSRT*LKVGQN
Trigger: ATTCTGTCCTACCTTTAATCAGGTCCTGCTCAGCAG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGGGCTCGGCACACATTaGGTAACAGTCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLGLGTH*VTVLVI
Trigger: TATCACCAGGACTGTTACTCAATGTGTGCCGAGCCC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATTGCTGGCGATCGGGTaGCAGCCAAGAGAGTGCAAG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEELLAIG*QPRECK
Trigger: CTTGCACTCTCTTGGCTGTCACCCGATCGCCAGCAA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ATCTTTCTTCACCTTTTTAAACTTGAGGGGTTTGTCCTTGAGGCCCTGGAGGTCCTCCTCTTGGACTCCTaGCCTCCGCCTACGAAGAGA +
Preference number: 4 (lower is better)
Translates to: IFLHLFKLEGFVLEALEVLLLDS*PPPTKR
Trigger: TCTCTTCGTAGGCGGAGGTCAGGAGTCCAAGAGGAG...GACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAAGAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR TCA 90 bp TACTTCCCAGCAGAGCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTACTTTTCTTCCGTGTTaGTGGGATGGGGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: YFPAERPDFLCLSFRVQPTFLPC*WDGGRR
Trigger: TCTTCTTCCCCCATCCCATCAACACGGAAGAAAAGT...AGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR GCA 90 bp GTGTCGCCTACCTTTTCGAAGTACGCAATCAACTCCACTTTAGAGCGAAAGGCTGGCTGCACGGGCTCATaGTTGCCCTCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VSPTFSKYAINSTLERKAGCTGS*LPSFSS
Trigger: AGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCC...AGCCTTTCGCTCTAAAGTGGAGTTGATTGCGTACTTCGAAAAGGTAGGCGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATGTCTCTGCTTTGCCTaGCTCTGCGGGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEECLCFA*LCGLSR
Trigger: TCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGAGACA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GTCTCCTGCACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCCTCGCGGCCAGATTTCCTTTaGTTAAGCTTCCGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VSCTDRIEDSFTAFFLASRPDFL*LSFRVQ
Trigger: CTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCG...CGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGAAAAACATCCCCAATaGTCCAACTACTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSEKHPQ*SNYSHP
Trigger: AGGGTGGGAGTAGTTGGAGCATTGGGGATGTTTTTC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCACAGGAGGCCTCTGTaGTTTCCTCAACTACCAAAT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSHRRPL*FPQLPN
Trigger: ATTTGGTAGTTGAGGAAAGCACAGAGGCCTCCTGTG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATGCAGGGCCCCTGCCTaGCAGGGCGATAAACCGCCA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKCRAPA*QGDKPP
Trigger: TGGCGGTTTATCGCCCTGGCAGGCAGGGGCCCTGCA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGTGACAATTTGGGGCTaGTCCCTGTCCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPVTIWG*SLSQVH
Trigger: GTGCACCTGGGACAGGGAGCAGCCCCAAATTGTCAC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGTTGTGCTCCCTCCTTaGACTGCCCTCACACCTGCT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPVVLPP*TALTPA
Trigger: AGCAGGTGTGAGGGCAGTGCAAGGAGGGAGCACAAC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTCTGGGCTCTGCCTGTaGACAAGTCGGAGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSGLCL*TSRSPE
Trigger: CTCCGGGCTCCGACTTGTGCACAGGCAGAGCCCAGA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTTGACACACAAACACTaGGGGGAGAGGGGCTATCAG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLTHKH*GERGYQ
Trigger: CTGATAGCCCCTCTCCCCGCAGTGTTTGTGTGTCAA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGTTCTGCAAGCCTTTTaGACTCCACTGTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQVLQAF*TPLSSS
Trigger: GGAGCTGGACAGTGGAGTGCAAAAGGCTTGCAGAAC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTATCAGCTATTCGGCTTaGTGGCTTGGAGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLISYSA*WLGVGL
Trigger: GAGTCCCACTCCAAGCCAGCAAGCCGAATAGCTGAT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAACCTTGGAGAGAGAATaGCCACCACCTGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEETLERE*PPPGLS
Trigger: GGACAGGCCAGGTGGTGGGCATTCTCTCTCCAAGGT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACCATGGTCATTTTATTaGCCTGGGAAGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLPWSFY*PGKGRV
Trigger: CACCCTCCCCTTCCCAGGGCAATAAAATGACCATGG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGATGCTGCACCCGGCATaGAATGGTCACTACAGTCAG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQMLHPA*NGHYSQ
Trigger: CTGACTGTAGTGACCATTGCATGCCGGGTGCAGCAT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACTTCCTTGCCCAGACCCTaGACACTGCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PDPAHCIKVLSFKQQKSTSLPRP*TLHQGP
Trigger: AGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGGA...AGTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR GCA 90 bp CCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACTCTGGAAGGCGGAGGTTaGAGTGAGCTGAGATCACAC +
Preference number: 4 (lower is better)
Translates to: PDPAHCIKVLSFKQQKSTLEGGG*SELRSH
Trigger: GTGTGATCTCAGCTCACTGCAACCTCCGCCTTCCAG...AGTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPTMESC*SWSTEA
Trigger: TGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303391.11
CDS-3UTR CCA 90 bp TGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CPDPAHCIKVLSFKQQKSRPWRS*SSDFSS
Trigger: GGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT...TGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CCA 90 bp CCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACTTTGTCCTTGAGGCCCTaGAGGTCCTGGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PDPAHCIKVLSFKQQKSTLSLRP*RSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAA...AGTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTTTGGGCTTCTTAGGTaGTTTCTGCTCTCGCCGGGA +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQFGLLR*FLLSPG
Trigger: TCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGCACACCCTCTGACGTaGCCGCCTTGGGTCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKAHPLT*PPWVSW
Trigger: CCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACTCAGCCTTGCCCCCTaGCGAAGTTTGAAAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLSLAP*RSLKRH
Trigger: ATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCTGAG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CCA 90 bp AACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCTGCTGCTGCGCCCCTTaGGGCTGCTCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: NSCLYSCWFALQSAPCKVCCCAP*GCSPCF
Trigger: AAAGCAAGGAGAGCAGCCCCAAGGGGCGCAGCAGCA...GACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACGGCCGTGGCGGCGGTaGCAACCGCGGGCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTERPWRR*QPRAES
Trigger: AGACTCAGCCCGCGGTTGCCACCGCCGCCACGGCCG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGTCAACAGCTTGTCTaGTCAGTAGTATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGQQLV*SVVSAA
Trigger: TGCTGCAGATACTACTGACCAGACAAGCTGTTGACC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGCCATCCTCTCCTGTaGTTCAGGCCAGTCTACACC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGHPLL*FRPVYT
Trigger: GGTGTAGACTGGCCTGAACCACAGGAGAGGATGGCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGCCGACAAGTGTGGTTaGGCACCGCGGCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKADKCG*APRLPG
Trigger: TCCAGGCAGCCGCGGTGCCCAACCACACTTGTCGGC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAAAACAGGGTGGGGCTaGTACTGGCAGCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEKTGWG*YWQQED
Trigger: GTCCTCCTGCTGCCAGTACCAGCCCCACCCTGTTTT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGGGGACCCAGGTACTaGTCCCAGCTCGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLWGPRY*SQLGSW
Trigger: CCAAGACCCGAGCTGGGACCAGTACCTGGGTCCCCA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAAAATGTGTGGTGTTCTaGCCCCCTGTCTGCATCGAG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLKCVVF*PPVCIE
Trigger: CTCGATGCAGACAGGGGGCCAGAACACCACACATTT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGTAGTAACTAACAACTaGAACAAGGGTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPVVTNN*NKGGGD
Trigger: GTCTCCCCCACCCTTGTTCCAGTTGTTAGTTACTAC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTTGGCACTGATGGATTaGGGGATGTGGCGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLALMD*GMWRFW
Trigger: CCAGAAACGCCACATCCCCCAATCCATCAGTGCCAA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGAGCGAGCTGAGAAGCTaGGGCCGTTGGCTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPSELRS*GRWLVW
Trigger: CCAAACTAGCCAACGGCCCCAGCTTCTCAGCTCGCT...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCACAGCAATGAAAAGCTaGGCAGAGAAGCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSTAMKS*AEKQVT
Trigger: TGTCACCTGCTTCTCTGCCCAGCTTTTCATTGCTGT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCCCAGAGAGCCTGACTaGAATGCTCTGGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQPREPD*NALEKE
Trigger: CTCCTTTTCCAGAGCATTCCAGTCAGGCTCTCTGGG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCCAGAGAGCCTGACTaGAATGCTCTGGAAAAGGAG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPREPD*NALEKE
Trigger: CTCCTTTTCCAGAGCATTCCAGTCAGGCTCTCTGGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCTGCACCCAGAACCTTaGGACCTCTTTCACAAGCAC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLHPEP*DLFHKH
Trigger: GTGCTTGTGAAAGAGGTCCCAAGGTTCTGGGTGCAG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAACACACATCCCCTCCTaGCTCCCCTCAAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLTHIPS*LPSRKH
Trigger: ATGTTTCCTTGAGGGGAGCCAGGAGGGGATGTGTGT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTGCAAGCCCCCTCCATaGTCATTTTATTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQCKPPP*SFYCPG
Trigger: CCCAGGGCAATAAAATGACCATGGAGGGGGCTTGCA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGACAGGTTTCCAGGCTaGAGCCAGCTCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEDRFPG*SQLPSA
Trigger: TGCAGAAGGGAGCTGGCTCCAGCCTGGAAACCTGTC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGCTTTTCCCTGGGGATTaGTCAAATACACATCATACT +
Preference number: 4 (lower is better)
Translates to: LQVFSPFPLFSPRVDTSRLFPGD*SNTHHT
Trigger: AGTATGATGTGTATTTGATCAATCCCCAGGGAAAAG...CCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATTCTTGGGAATGGCCTaGGGGTCGGCCTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEFLGMA*GSASAF
Trigger: AAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTTCTTGGGAATGGCCTaGGGGTCGGCCTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPFLGMA*GSASAF
Trigger: AAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCCTTGGCATGGAGGATaGAACAATGTCTTTGCGCTC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLPWHGG*NNVFAL
Trigger: GAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGATCAGGGATTGGGCTaGTGGGAGTTTGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPDQGLG*WEFGCR
Trigger: CCTGCAACCAAACTCCCATCAGCCCAATCCCTGATC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCTTACCAGGACCAGATaGCGCCCAGGTGACGGGGAA +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLLTRTR*RPGDGE
Trigger: TTCCCCGTCACCTGGGCGTCATCTGGTCCTGGTAAG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGCTTCGGGCCTGGAATaGTGCCACCCAACAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPASGLE*CHPTED
Trigger: ATCTTCTGTTGGGTGGCATCATTCCAGGCCCGAAGC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTCACTGTCACAGCAATaGAAAGCTGGGCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQSLSQQ*KAGQRS
Trigger: GCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTAGTGGTGACTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGTTTAAGAGGCTTCTGTaGCTCTGCTCACTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: LVVTCPDPAHCIKVLSFKFKRLL*LCSLLL
Trigger: CAAGAGGAGTGAGCAGAGTCACAGAAGCCTCTTAAA...CTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCACCACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGCTGCACGGGCTCATaGTTGCCCTCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGCTGS*LPSFSS
Trigger: AGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCAGCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TACCTTTTCGAAGTACGCAATCAACTCCACTTTAGAGCGAAAGGCTTTTCCCTGTGTCTCTGCTTTGCCTaGCTCTGCGGGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: YLFEVRNQLHFRAKGFSLCLCFA*LCGLSR
Trigger: TCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGAGACA...CAGGGAAAAGCCTTTCGCTCTAAAGTGGAGTTGATTGCGTACTTCGAAAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACGGCCAGATTTCCTTTaGTTAAGCTTCCGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLRPDFL*LSFRVQ
Trigger: CTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGCATCTTCTCCTCTTTaGAGACGCTGCTGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQASSPL*RRCCSS
Trigger: ACTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGATGAAACAATGTCTTTaGGCTCTCCCTCCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQMKQCL*ALPPLG
Trigger: ACCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCAT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCTCTCACCCCGCTGTaGTCTGCCCGGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPLTPL*SARPDP
Trigger: GGGGTCAGGCCGGGCAGAGCACAGCGGGGTGAGAGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACCTCTCACCCCGCTGTaGTCTGCCCGGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEPLTPL*SARPDP
Trigger: GGGGTCAGGCCGGGCAGAGCACAGCGGGGTGAGAGG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGGTCTTGGGAGTTCTaGATTGGTACCGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGSWEF*IGTATA
Trigger: GGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGGTCTTGGGAGTTCTaGATTGGTACCGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGSWEF*IGTATA
Trigger: GGCAGTAGCGGTACCAATGCAGAACTCCCAAGACCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAACAGAAGATTGTCTaGACCCGCACTGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEQQKIV*TRTGAH
Trigger: GTGAGCGCCAGTGCGGGTGCAGACAATCTTCTGTTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACAGGAAGAACAGCTTTaGCACTTGACACACAAACAC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPQEEQL*HLTHKH
Trigger: GTGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTCACATCTAAGTTTTaGTGGCGATCGGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLTSKF*WRSGDS
Trigger: GCTGTCACCCGATCGCCAGCAAAACTTAGATGTGAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTTCCTGTTCATAGTCTTTGTTCATTAGTGGTGACTTGCCCAGACCCTGCACACGACTTGCCCAGACCCTaGACACTGCATCAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: FPVHSLCSLVVTCPDPAHDLPRP*TLHQGP
Trigger: AGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTC...GTGTGCAGGGTCTGGGCAAGTCACCACTAATGAACAAAGACTATGAACAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAAGCAAGGTGTATTCTaGGGAGTCACATGTCACATC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSKQGVF*GVTCHI
Trigger: GATGTGACATGTGACTCCCCAGAATACACCTTGCTT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303391.11
CDS-3UTR CCA 90 bp GACTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: DLPRPCTLHQGPEFQATETMESC*SWSTEA
Trigger: TGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGT...TTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR CCA 90 bp TTTCCTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: FPCPDPAHCIKVLSFKQQTMESC*SWSTEA
Trigger: TGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGT...CTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CCA 90 bp TGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACATCCCAGCTACCATaGAATCCTGTTGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CPDPAHCIKVLSFKQQKSTSQLP*NPVGAG
Trigger: ACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGT...TGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674996.1
ENST00000675526.1
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAGCCTTCAGGCAGGGTaGGGTCATCATACATGGGTC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEESLQAG*GHHTWV
Trigger: GACCCATGTATGATGACCCCACCCTGCCTGAAGGCT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGCGAAAGGCTTTTCCCTaGGGATTGATCAAATACACA +
Preference number: 4 (lower is better)
Translates to: TDRIEDSFTAFFLASAAARKAFP*GLIKYT
Trigger: TGTGTATTTGATCAATCCCCAGGGAAAAGCCTTTCG...CGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTCACGGCTTTCTTTTTaGCCTCGGCGGCAGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSRLSF*PRRQRL
Trigger: CAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGCTGCTGCGCCCCTTaGGGCTGCTCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLCCCAP*GCSPCF
Trigger: AAAGCAAGGAGAGCAGCCCCAAGGGGCGCAGCAGCA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAAGCTACTTCTGGCCCTaGTTAGGTCTTCAACCTGAC +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLSYFWP*LGLQPD
Trigger: GTCAGGTTGAAGACCTAACCAGGGCCAGAAGTAGCT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAGCTACTTCTGGCCCTaGTTAGGTCTTCAACCTGAC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLSYFWP*LGLQPD
Trigger: GTCAGGTTGAAGACCTAACCAGGGCCAGAAGTAGCT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATCTAGCGCCACCCGTTaGAGGACGTCCCTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEESSATR*RTSLEN
Trigger: ATTCTCAAGGGACGTCCTCCAACGGGTGGCGCTAGA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACTGATCACTAAAGACTaGCAAGGAAGTGCTAGACAG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLITKD*QGSARQ
Trigger: CTGTCTAGCACTTCCTTGCCAGTCTTTAGTGATCAG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGAGCCTCAGGCCCCACTaGCAGCTCTGGAATAAACTG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPSLRPH*QLWNKL
Trigger: CAGTTTATTCCAGAGCTGCCAGTGGGGCCTGAGGCT...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAAGCAGGTGACAATTTaGGGCTGCTCCCTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEKQVTI*GCSLSQ
Trigger: CTGGGACAGGGAGCAGCCCCAAATTGTCACCTGCTT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCATTGGCAGTTTGTGTCTaGTTATTACCCTCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLAVCV*LLPSFA
Trigger: GGCGAAAGAGGGTAATAACCAGACACAAACTGCCAA...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAATTTCCTCCAGGGTCTaGGCTCTGCCTGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEISSRV*ALPVHK
Trigger: CTTGTGCACAGGCAGAGCCCAGACCCTGGAGGAAAT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGAGAGGGGCTATCAGTaGGCAGGAGCCAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPERGYQ*AGAKPL
Trigger: AAGAGGTTTGGCTCCTGCCCACTGATAGCCCCTCTC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGACCACGAATCTGCTTaGACAGAAGAAGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQDHESA*TEEVTS
Trigger: GCTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGAGCCTCCTTCACCTaGCACAGGAAAGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGASFT*HRKALE
Trigger: TTCAAGGGCTTTCCTGTGCCAGGTGAAGGAGGCTCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAACCTGGGTGCTGCCTaGAGCCTCCTTCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLNLGAA*SLLHLA
Trigger: TGCCAGGTGAAGGAGGCTCCAGGCAGCACCCAGGTT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGAGGCTGACTCCACATaGGCTCACCCTGACCAGGTC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLEADST*AHPDQV
Trigger: GACCTGGTCAGGGTGAGCCCATGTGGAGTCAGCCTC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTTCGGCTTGCTGGCTTaGAGTGGGACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLFGLLA*SGTPGL
Trigger: GAGCCCAGGAGTCCCACTCCAAGCCAGCAAGCCGAA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGCACCCGGCATGCAATaGTCACTACAGTCAGCACTC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEAPGMQ*SLQSAL
Trigger: GAGTGCTGACTGTAGTGACCATTGCATGCCGGGTGC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp CTGTTTGGCCTTGGCATGGAGGATGAAACAATGTCTTaGCGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCT +
Preference number: 4 (lower is better)
Translates to: LFGLGMEDETMS*RSPSPRCLYFS
Trigger: AGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGGCCAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACAAAGCAGGAACTGGTaGGTCTGTATTTTTATGGAG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPQSRNW*VCIFME
Trigger: CTCCATAAAAATACAGACTCACCAGTTCCTGCTTTG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000303391.11
CDS-3UTR TCA 90 bp ATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTCTCTTCTTGGGAATGGCCTaGGGGTCGGCCTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ILVGLLCNPLRVKSANSLFLGMA*GSASAF
Trigger: AAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAA...GAGAGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGTTAGGTCTTCAACCTaGCTGTGCTTGTCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLVRSST*LCLSVR
Trigger: TCTTACCGACAAGCACAGTCAGGTTGAAGACCTAAC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATCACATCTGGTGGCTTaGGGGACTAAATGTCACCAA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLSHLVA*GTKCHQ
Trigger: TTGGTGACATTTAGTCCCTCAAGCCACCAGATGTGA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATCTAGAGTAGAAGGGTaGAAAGGCTCGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLSRVEG*KGSLFR
Trigger: CCTGAACAACGAGCCTTTTCACCCTTCTACTCTAGA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAAGCAGCTCTGGACAATaGTTCCAGAAGCCACATTAC +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLSSSGQ*FQKPHY
Trigger: GTAATGTGGCTTCTGGAATCATTGTCCAGAGCTGCT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAGCAGCTCTGGACAATaGTTCCAGAAGCCACATTAC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQSSSGQ*FQKPHY
Trigger: GTAATGTGGCTTCTGGAATCATTGTCCAGAGCTGCT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGCCGGACACAGCTGGTaGGAATCCTGCAGCTTAAGG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLAGHSW*ESCSLR
Trigger: CCTTAAGCTGCAGGATTCTCACCAGCTGTGTCCGGC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCGCCATCCAGCGAGCTaGGAAGCTGGGGCCGTTGGC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIRHPAS*EAGAVG
Trigger: GCCAACGGCCCCAGCTTCTCAGCTCGCTGGATGGCG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTCAGCCCAGAGAGCCTaGCTGGAATGCTCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPSAQRA*LECSGK
Trigger: TTTTCCAGAGCATTCCAGTCAGGCTCTCTGGGCTGA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTCAGAAGGCTCAGCTaGTCCGAGGCGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLRRLS*SEASRA
Trigger: TGCTCTGCTCGCCTCGGATCAGCTGAGCCTTCTGAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCTGCTGAGCAGGACCTaGTTAAAGGTAGGACAGAAT +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLLSRT*LKVGQN
Trigger: ATTCTGTCCTACCTTTAATCAGGTCCTGCTCAGCAG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAACAGCTTTGCCACTTaGCACACAAACACTGCGGGG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEENSFAT*HTNTAG
Trigger: CCCCGCAGTGTTTGTGTGTCAAGTGGCAAAGCTGTT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTTGGACAGAAGAAGTaGCCAGCAGACAGATTTGTC +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLGQKK*PADRFV
Trigger: GACAAATCTGTCTGCTGGTCACTTCTTCTGTCCAAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGACAGAGTGGGAAGGATaGAACACACTCGGACCCTAC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPTEWEG*NTLGPY
Trigger: GTAGGGTCCGAGTGTGTTTCATCCTTCCCACTCTGT...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCATATTCATTGACTACTaGCTCTGGAGCGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSIFIDY*LWSGCY
Trigger: ATAACAGCCGCTCCAGAGTCAGTAGTCAATGAATAT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCATTTAAGAGGCTTCTGTaGCTCTGCTCACTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: CPDPAHCIKVLSFKQQKSFKRLL*LCSLLL
Trigger: CAAGAGGAGTGAGCAGAGTCACAGAAGCCTCTTAAA...TGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674996.1
ENST00000675526.1
CDS-3UTR TCA 90 bp TTTCCTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGTCGTTTGCATCTCTTTaGTTACCAGCAGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: FPCPDPAHCIKVLSFKQQSFASL*LPAGRT
Trigger: AGTTCTGCCTGCTGGTAATCAAAGAGATGCAAACGA...CTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTTCTTAGGTGGTTTCTaGTCTCGCCGGGAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLFLGGF*SRREGL
Trigger: GAGCCCCTCCCGGCGAGAGCAGAAACCACCTAAGAA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATGGGGCTGCTCTCCTTaGTTTTCCGCCCAGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKWGCSP*FSAQGS
Trigger: AGAGCCCTGGGCGGAAAAGCAAGGAGAGCAGCCCCA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGTGTTTGTACTTTTCTaGGGCCGTGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKVFVLF*GRGGGG
Trigger: GCCACCGCCGCCACGGCCGCAGAAAAGTACAAACAC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTGTGTTTGTACTTTTCTaGGGCCGTGGCGGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: FILVGLLCNPLRVKSANSVFVLF*GRGGGG
Trigger: GCCACCGCCGCCACGGCCGCAGAAAAGTACAAACAC...AGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGAAAAACATCCCCAATaGTCCAACTACTCCCACCCT +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLEKHPQ*SNYSHP
Trigger: AGGGTGGGAGTAGTTGGAGCATTGGGGATGTTTTTC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACCTAGTTTAGAAAAGTaGAAAGCTACTTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPPSLEK*KATSGP
Trigger: AGGGCCAGAAGTAGCTTTGCACTTTTCTAAACTAGG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCTGTGAAGCGTCCTTaGCAGTTTTGGATTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPVKRP*QFWIGA
Trigger: AGCCCCAATCCAAAACTGGCAAGGACGCTTCACAGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCGCTACTGCCCTGCTaGACTACGCTAGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPLLPC*TTLDSG
Trigger: TCCAGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAGGTGCACTGTTCATaGTTCGGGCCTGGAATGATG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEQVHCS*FGPGMM
Trigger: CATCATTCCAGGCCCGAAGCATGAACAGTGCACCTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGTGACAATTTGGGGCTaGTCCCTGTCCCAGGTGCAC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLVTIWG*SLSQVH
Trigger: GTGCACCTGGGACAGGGAGCAGCCCCAAATTGTCAC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATGGGAAGGAGGGTGGTaGTGGGCCTTCCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKWEGGW*WAFQVT
Trigger: AGTGACCTGGAAGGCCCAGCACCACCCTCCTTCCCA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGACAAAGCAGGCCTATaGGCACAGTCTATGTGTTAC +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLDKAGL*AQSMCY
Trigger: GTAACACATAGACTGTGCGCATAGGCCTGCTTTGTC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAAAAAGACCACGAATCTaGTTGGACAGAAGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPKRPRI*LDRRSD
Trigger: GTCACTTCTTCTGTCCAAGCAGATTCGTGGTCTTTT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTACCTTGGAGAGAGAATaGCCACCACCTGGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLTLERE*PPPGLS
Trigger: GGACAGGCCAGGTGGTGGGCATTCTCTCTCCAAGGT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACTAAGCTACCGAGCAGGTaGAGGTATGAACATCAGCTG +
Preference number: 4 (lower is better)
Translates to: PDPAHCIKVLSFKQQKSTKLPSR*RYEHQL
Trigger: CAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTT...AGTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR GCA 90 bp ATTAGCAAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTTTTTATGAATTTCCTTaGCCAGACCCTGCACACTGC +
Preference number: 4 (lower is better)
Translates to: ISKLPSRCRYEHQLTLALFYEFP*PDPAHC
Trigger: GCAGTGTGCAGGGTCTGGGCAAGGAAATTCATAAAA...AAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTTGCTAAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CCA 90 bp CACATCATACTTCCCAGCAGAGCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HIILPSRAARFPLLKLPCTMESC*SWSTEA
Trigger: TGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGT...ACACGGAAGCTTAAGCAAAGGAAATCTGGCCGCTCTGCTGGGAAGTATGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLTMESC*SWSTEA
Trigger: TGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000628176.2
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACCCGTTTCTTGGGAATaGCCTGAGGGTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKPVSWE*PEGRPQ
Trigger: CTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAACTTTTCTGCGGCCGTaGCGGCGGTGGCAACCGCGG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTETFLRP*RRWQPR
Trigger: CCGCGGTTGCCACCGCCGCCACGGCCGCAGAAAAGT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGTGCAAAGCTACTTCTaGCCCTGGTTAGGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQVQSYF*PWLGLQ
Trigger: TTGAAGACCTAACCAGGGCCAGAAGTAGCTTTGCAC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGGTCAACAGCTTGTCTaGTCAGTAGTATCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLGQQLV*SVVSAA
Trigger: TGCTGCAGATACTACTGACCAGACAAGCTGTTGACC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCTGTTTGTTTTGAAGTaGGAACATGAAGACTCAATA +
Preference number: 4 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDLFVLK*EHEDSI
Trigger: TATTGAGTCTTCATGTTCCCACTTCAAAACAAACAG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGGCACCGCGGCTGCCTaGAAGAGAAGGGATGAACTA +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLGTAAA*KRRDEL
Trigger: TAGTTCATCCCTTCTCTTCCAGGCAGCCGCGGTGCC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGGCTGATGGGAGTTTaGTTGCAGGACTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGLMGV*LQDLLL
Trigger: TAAAAGCAAGTCCTGCAACCAAACTCCCATCAGCCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGACAGAATGGGGGTTTaGGGGCAAAGAGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLDRMGV*GQRDFQ
Trigger: TTGGAAATCTCTTTGCCCCCAAACCCCCATTCTGTC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAAGAGTGCAAAACCTaGGTGCTGCCTGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQECKT*VLPGAS
Trigger: GGAGGCTCCAGGCAGCACCCAGGTTTTGCACTCTTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAAGGCTGCCCCAGCCCTaGTCCTCCGAAGGGCTCACG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTERLPQP*SSEGLT
Trigger: CGTGAGCCCTTCGGAGGACCAGGGCTGGGGCAGCCT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAGAATGCCCACCACCTaGCCTGTCCAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLRMPTT*PVQEEL
Trigger: CAGCTCTTCCTGGACAGGCCAGGTGGTGGGCATTCT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGCAAGCCCCCTCCATaGTCATTTTATTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPCKPPP*SFYCPG
Trigger: CCCAGGGCAATAAAATGACCATGGAGGGGGCTTGCA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGCTGTCAGGTGTTTTaGGAGCCCAAAACCATGCCT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGCQVF*EPKTMP
Trigger: AGGCATGGTTTTGGGCTCCCAAAACACCTGACAGCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp CCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTaGGACAGAAGAAGTGACCAGCAGACAGATTTGTCG +
Preference number: 4 (lower is better)
Translates to: PLKEARKRPRIC*DRRSDQQTDLS
Trigger: CGACAAATCTGTCTGCTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTTGCTTTCAAAGCAGGAACTGGTaGGTCTGTATTTTTATGGAG +
Preference number: 4 (lower is better)
Translates to: KLPSRCRYEHQLTLALCFQSRNW*VCIFME
Trigger: CTCCATAAAAATACAGACTCACCAGTTCCTGCTTTG...AAAGCAAAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTCCCCGGTCACGGATaGTGGAGCGCCGCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVPGHG*WSAAVW
Trigger: CCAAACAGCGGCGCTCCATCATCCGTGACCGGGGAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGGGTCTTGCGCTTCTTaGTGGGGAGTACGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKGSCAS*WGVRSP
Trigger: AGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGACTCTGAGTGGTGGTaGTGGTGGTGGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKDSEWW*WWWCSF
Trigger: GAAGGAGCACCACCACCATCACCACCACTCAGAGTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGGCTAGTTTGGCACTaGTGGATTGGGGGATGTGGC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLWLVWH*WIGGCG
Trigger: GCCACATCCCCCAATCCATCAGTGCCAAACTAGCCA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTTCTTCACCTTTTTAAACTTGAGGGGTTTGTCCTTGAGGCCCTGGAGGTCCTGTTTAAGAGGCTTCTGTaGCTCTGCTCACTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLHLFKLEGFVLEALEVLFKRLL*LCSLLL
Trigger: CAAGAGGAGTGAGCAGAGTCACAGAAGCCTCTTAAA...CAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATGTCTCTGCTTTGCCTaGCTCTGCGGGCTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKCLCFA*LCGLSR
Trigger: TCTGCTGAGCCCGCAGAGGCAGGCAAAGCAGAGACA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTTGTTGGTTTGCTTTaGAATCCGCTCCGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLVGLL*NPLRVK
Trigger: CTTTACACGGAGCGGATTGCAAAGCAAACCAACAAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGACAACCTGGTCGGATaGTGCGCTCTCGTGGATAAG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLDNLVG*CALVDK
Trigger: CTTATCCACGAGAGCGCAGCATCCGACCAGGTTGTC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGGGAGCTGGGGGTTGTaGTCCCTCCTTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIGSWGL*SLLALP
Trigger: GGGCAGTGCAAGGAGGGAGCACAACCCCCAGCTCCC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAGTGCAAAACCTGGGTaGTGCCTGGAGCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSAKPG*CLEPPS
Trigger: TGAAGGAGGCTCCAGGCAGCACCCAGGTTTTGCACT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGCAGGCTTCAAGTTCTaGAAGCCTTTTGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEAGFKF*KPFALH
Trigger: GTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAACTCCTGGGCTCCACTaGTTTGGGTGGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKTPGLH*FGWLLA
Trigger: AGCCAGAAGCCACCCAAAGCAGTGGAGCCCAGGAGT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAGGAAACATCAATCTTaGCTTTCCTTAAAAGCACGG +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSRKHQS*LSLKAR
Trigger: CCGTGCTTTTAAGGAAAGGCAAGATTGATGTTTCCT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAAGGAAACATCAATCTTaGCTTTCCTTAAAAGCACGG +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPRKHQS*LSLKAR
Trigger: CCGTGCTTTTAAGGAAAGGCAAGATTGATGTTTCCT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCTCACATCTAAGTTTTaGTGGCGATCGGGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPLTSKF*WRSGDS
Trigger: GCTGTCACCCGATCGCCAGCAAAACTTAGATGTGAG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGGAGCCCAAAACCATaGCTAATGAGGGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGSPKP*LMRVMA
Trigger: AGCCATTACCCTCATTAGGCATGGTTTTGGGCTCCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGGAGCCCAAAACCATaGCTAATGAGGGTAATGGCT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGSPKP*LMRVMA
Trigger: AGCCATTACCCTCATTAGGCATGGTTTTGGGCTCCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCTAGCTCTTCCAGATaGTGCACCCGGCATGCAATG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPSSSR*CTRHAM
Trigger: CATTGCATGCCGGGTGCAGCATCTGGAAGAGCTAGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGAGCCAGCTCCCTTCTaGACAGGGTGGCCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKEPAPF*TGWPVL
Trigger: TAACACAGGCCACCCTGTGCAGAAGGGAGCTGGCTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGAGTCTGTATTTTTATaGAGCAGTCTCTCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLESVFL*SSLSSS
Trigger: CGAGGAGGAGAGACTGCTCCATAAAAATACAGACTC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000628176.2
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGCCTCTGCCAGTTCCTaGAGCTTTGGGAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLASASS*SFGRFG
Trigger: CCCAAATCTCCCAAAGCTCCAGGAACTGGCAGAGGC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGTGGTGCTCCTTCTTaGGGGGTGAGGAGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGGAPS*GVRRRC
Trigger: GCAGCGCCTCCTCACCCCCCAAGAAGGAGCACCACC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCAGTGAGCCTCCTCTaGGCATCTTCTCCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPVSLL*ASSPLC
Trigger: GCAAAGAGGAGAAGATGCCCAGAGGAGGCTCACTGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTCTCTAACGACCACATaGGGGAAAGGTTTGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSLTTT*GKGLGG
Trigger: CCCGCCCAAACCTTTCCCCCATGTGGTCGTTAGAGA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACGTCCTTGCCAGTTTTaGATTGGGGCTGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKRPCQF*IGAGVG
Trigger: CCCCACACCAGCCCCAATCCAAAACTGGCAAGGACG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATGGAGCCGACAAGTGTaGTTGGGCACCGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEWSRQV*LGTAAA
Trigger: GGCAGCCGCGGTGCCCAACCACACTTGTCGGCTCCA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGCCTGTGGGTGTTTCTaGAAGCATAAGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPACGCF*KHKTAV
Trigger: GACAGCAGTCTTATGCTTCCAGAAACACCCACAGGC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGGAAGGGAAAGAGGCTaGGCAACTGCCTCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLGRERG*ATASLR
Trigger: CCTCAAAGAGGCAGTTGCCCAGCCTCTTTCCCTTCC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCACACTCGGACCCTACTaGCAGGGAGGCCTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDITLGPY*QGGLRG
Trigger: GCCTCGCAGGCCTCCCTGCCAGTAGGGTCCGAGTGT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCTGGAGGGGACCCCTTaGACTGACGCACATGATTCT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLLEGTP*TDAHDS
Trigger: AGAATCATGTGCGTCAGTCCAAGGGGTCCCCTCCAG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCAATTACTCGTAGGATaGGGGAGAAGAAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLQLLVG*GRRKGH
Trigger: ATGTCCCTTTCTTCTCCCCCATCCTACGAGTAATTG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCACGGGAGCCCAGCATaGGCAAGGGCTCGGCACACA +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIHGSPA*ARARHT
Trigger: TGTGTGCCGAGCCCTTGCCCATGCTGGGCTCCCGTG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGACAGGTTTCCAGGCTaGAGCCAGCTCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKDRFPG*SQLPSA
Trigger: TGCAGAAGGGAGCTGGCTCCAGCCTGGAAACCTGTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCATCTCTTTGATTACCAGCAGGCAGAACTCTTTTCCTATCTTCATTGGCCATTCTGCTCACTCCTCTTaGACTCCTGACCTCCGCCTA +
Preference number: 4 (lower is better)
Translates to: CISLITSRQNSFPIFIGHSAHSS*TPDLRL
Trigger: TAGGCGGAGGTCAGGAGTCCAAGAGGAGTGAGCAGA...ATGGCCAATGAAGATAGGAAAAGAGTTCTGCCTGCTGGTAATCAAAGAGATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CCA 90 bp CCTGTTCATAGTCTTTGTTCATTAGTGGTGACTTGCCCAGACCCTGCACACTGCTCACAAAGGAGTTCTTaGGCAGCAGATGTGTTGATG +
Preference number: 4 (lower is better)
Translates to: PVHSLCSLVVTCPDPAHCSQRSS*AADVLM
Trigger: CATCAACACATCTGCTGCCCAAGAACTCCTTTGTGA...GCAGTGTGCAGGGTCTGGGCAAGTCACCACTAATGAACAAAGACTATGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATCTAGAGTAGAAGGGTaGAAAGGCTCGTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEESRVEG*KGSLFR
Trigger: CCTGAACAACGAGCCTTTTCACCCTTCTACTCTAGA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTGTTGGGCCACTCGATaGCTGGCAGGCCACAGGAGG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDICWATR*LAGHRR
Trigger: CCTCCTGTGGCCTGCCAGTCATCGAGTGGCCCAACA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAAGACAACACACACTTaGCAGTTCATGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEKTTHT*QFMAAA
Trigger: AGCTGCTGCCATGAACTGTCAAGTGTGTGTTGTCTT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACAGATGACGCCCAGGTaGCGGGGAAGCAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEQMTPR*RGSSSG
Trigger: TCCAGAGCTGCTTCCCCGTCACCTGGGCGTCATCTG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACTGCTGAAAGGCGACTaGCTCGTGATGCCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLLKGD*LVMPLG
Trigger: TCCCAAAGGCATCACGAGTCAGTCGCCTTTCAGCAG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAAACCTCCTGTCAACCTaGCCCCAAGGCAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTENLLST*PQGRGS
Trigger: GCTGCCCCTGCCTTGGGGTCAGGTTGACAGGAGGTT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAACCTCCTGTCAACCTaGCCCCAAGGCAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDINLLST*PQGRGS
Trigger: GCTGCCCCTGCCTTGGGGTCAGGTTGACAGGAGGTT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCTCAGAAGAAGCAATaGCAGCAGGGAGGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPQKKQ*QQGGKL
Trigger: AAGCTTCCCTCCCTGCTGTCATTGCTTCTTCTGAGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGAGAGCAAGACCTTGCTaGTCTCTTGCTCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPRARPC*SLALHR
Trigger: TCTGTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCT...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGACTGCTGTCTCATTTaGTACTTTGATAAGGTACTT +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPDCCLI*YFDKVL
Trigger: AAGTACCTTATCAAAGTAGCAAATGAGACAGCAGTC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAACCTGGTCGGATGCTaGGCTCTCGTGGATAAGTGT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLNLVGC*ALVDKC
Trigger: ACACTTATCCACGAGAGCGCAGCATCCGACCAGGTT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGACAAAGCAGGCCTATaGGCACAGTCTATGTGTTAC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEDKAGL*AQSMCY
Trigger: GTAACACATAGACTGTGCGCATAGGCCTGCTTTGTC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAAAAGACCACGAATCTaGTTGGACAGAAGAAGTGAC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQKRPRI*LDRRSD
Trigger: GTCACTTCTTCTGTCCAAGCAGATTCGTGGTCTTTT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGCTCTTCCAGATGCTaGACCCGGCATGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKSSSRC*TRHAMV
Trigger: GACCATTGCATGCCGGGTGCAGCATCTGGAAGAGCT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACCTAGCTCTTCCAGATaGTGCACCCGGCATGCAATG +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKPSSSR*CTRHAM
Trigger: CATTGCATGCCGGGTGCAGCATCTGGAAGAGCTAGG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ATTAGCAAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTCTGACGCTGGCTCTTTaGTTTCTTTTTAATCTTGAC +
Preference number: 4 (lower is better)
Translates to: ISKLPSRCRYEHQLTLALLTLAL*FLFNLD
Trigger: GTCAAGATTAAAAAGAAAGCAAAGAGCCAGCGTCAG...AAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTTGCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATTGTCCTTGAGGCCCTaGAGGTCCTGGTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKLSLRP*RSWSSD
Trigger: GTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGCCTTCAGGCAGGGTaGGGTCATCATACATGGGTC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKSLQAG*GHHTWV
Trigger: GACCCATGTATGATGACCCCACCCTGCCTGAAGGCT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCGAAAGGCTTTTCCCTaGGGATTGATCAAATACACA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLRKAFP*GLIKYT
Trigger: TGTGTATTTGATCAATCCCCAGGGAAAAGCCTTTCG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGCCTCTGCCAGTTCCTaGAGCTTTGGGAGATTTGGG +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKASASS*SFGRFG
Trigger: CCCAAATCTCCCAAAGCTCCAGGAACTGGCAGAGGC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGGCTGAGTCTTAGCTaGCTCCTTGGGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGLSLS*LLGAAV
Trigger: GACGGCTGCCCCAAGGAGCCAGCTAAGACTCAGCCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACATGGGGGAAAGGTTTaGGCGGGAGGGGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEHGGKV*AGGEVP
Trigger: AGGCACCTCCCCTCCCGCCCAAACCTTTCCCCCATG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCAAGGTCGGCTGGCATaGAGCCCCTGTTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIQGRLA*SPCWAT
Trigger: AGTGGCCCAACAGGGGCTCCATGCCAGCCGACCTTG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATCCCAGCTCGGGTCTTaGGAGTTCTGCATTGGTACC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKSQLGS*EFCIGT
Trigger: GGTACCAATGCAGAACTCCCAAGACCCGAGCTGGGA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATGGGGACCCAGGTACTaGTCCCAGCTCGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEWGPRY*SQLGSW
Trigger: CCAAGACCCGAGCTGGGACCAGTACCTGGGTCCCCA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACCTACACCACAGCTATaGACCAGACAGACAGTGAAA +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEPTPQL*TRQTVK
Trigger: TTTCACTGTCTGTCTGGTCCATAGCTGTGGTGTAGG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGGCTGATGGGAGTTTaGTTGCAGGACTTGCTTTTA +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGLMGV*LQDLLL
Trigger: TAAAAGCAAGTCCTGCAACCAAACTCCCATCAGCCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGGAGCCTTCTGTCCTTaGAGGAAGAGTTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLGAFCP*RKSSGG
Trigger: TCCTCCAGAACTCTTCCTCCAAGGACAGAAGGCTCC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAATGACCTAGCCCCATaGGTACTGGAAAGCTGTCGG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLNDLAP*VLESCR
Trigger: CCGACAGCTTTCCAGTACCCATGGGGCTAGGTCATT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGTAGTAACTAACAACTaGAACAAGGGTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPVVTNN*NKGGGD
Trigger: GTCTCCCCCACCCTTGTTCCAGTTGTTAGTTACTAC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCACTGTGTCTTTTGATATaGGAATACAGCATCAACAGA +
Preference number: 4 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLCLLI*EYSINR
Trigger: TCTGTTGATGCTGTATTCCCATATCAAAAGACACAG...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGAGTGGGAAGGAGGGTaGTGCTGGGCCTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEEWEGG*CWAFQV
Trigger: GACCTGGAAGGCCCAGCACCACCCTCCTTCCCACTC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAATTTCCTCCAGGGTCTaGGCTCTGCCTGTGCACAAG +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKISSRV*ALPVHK
Trigger: CTTGTGCACAGGCAGAGCCCAGACCCTGGAGGAAAT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGAGAGGGGCTATCAGTaGGCAGGAGCCAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKERGYQ*AGAKPL
Trigger: AAGAGGTTTGGCTCCTGCCCACTGATAGCCCCTCTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACTCAAAGCAGGAACTGGTaGGTCTGTATTTTTATGGAG +
Preference number: 4 (lower is better)
Translates to: PDPAHCIKVLSFKQQKSTQSRNW*VCIFME
Trigger: CTCCATAAAAATACAGACTCACCAGTTCCTGCTTTG...AGTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674996.1
ENST00000675526.1
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAACTACTCCCACCCTaGAGCCACGAAACTCTAAGT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQLLPP*SHETLS
Trigger: ACTTAGAGTTTCGTGGCTTCAGGGTGGGAGTAGTTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAGGTGGGGCCCGAATaGAATAAAGTGACGCTTGAA +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQVGPE*NKVTLE
Trigger: TTCAAGCGTCACTTTATTTCATTCGGGCCCCACCTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGGCAGAGAAGCAGGTaGCAATTTGGGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGQRSR*QFGAAP
Trigger: GGGAGCAGCCCCAAATTGTCACCTGCTTCTCTGCCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGGTCATATATTCATTaGCTACTGACTCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPWSYIH*LLTLER
Trigger: CCGCTCCAGAGTCAGTAGTCAATGAATATATGACCA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATGGCACAGGGGAGCATaGCTTCAACTCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEWHRGA*LQLRRG
Trigger: CCCCCTCCTGAGTTGAAGTCATGCTCCCCTGTGCCA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCTTAGAAAGGCATGCTaGGTATTCTTTGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLRKAC*VFFAFT
Trigger: TGTGAAAGCAAAGAATACTCAGCATGCCTTTCTAAG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACTTAGAAAGGCATGCTaGGTATTCTTTGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLRKAC*VFFAFT
Trigger: TGTGAAAGCAAAGAATACTCAGCATGCCTTTCTAAG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAACTGTATCTCTTCTTTTATaGATTTCCTTGCCCAGACCC +
Preference number: 4 (lower is better)
Translates to: PDPAHCIKVLSFKQQKSTVSLLL*ISLPRP
Trigger: GGGTCTGGGCAAGGAAATTCATAAAAGAAGAGATAC...AGTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTGCTTTGCCTGCCTCTaGGGGCTCAGCAGAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDICFACL*GLSRVV
Trigger: CACCACTCTGCTGAGCCCGCAGAGGCAGGCAAAGCA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACTTGTTGGTTTGCTTTaGAATCCGCTCCGTGTAAAG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEELVGLL*NPLRVK
Trigger: CTTTACACGGAGCGGATTGCAAAGCAAACCAACAAG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAGGAAGAACAGCTTTaGCACTTGACACACAAACAC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEQEEQL*HLTHKH
Trigger: GTGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGCAGGCTTCAAGTTCTaGAAGCCTTTTGCACTCCAC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLAGFKF*KPFALH
Trigger: GTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKRPWRS*SSDFSS
Trigger: GGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTTCCCTGGGGATTGATCAAATACACATCATACTTCCCAGCAGAGCGGCCAGATCGAAAGGCTTTTCCCTaGGGATTGATCAAATACACA +
Preference number: 4 (lower is better)
Translates to: FPWGLIKYTSYFPAERPDRKAFP*GLIKYT
Trigger: TGTGTATTTGATCAATCCCCAGGGAAAAGCCTTTCG...ATCTGGCCGCTCTGCTGGGAAGTATGATGTGTATTTGATCAATCCCCAGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTGCTGCTGCGCCCCTTaGGGCTGCTCTCCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDICCCAP*GCSPCF
Trigger: AAAGCAAGGAGAGCAGCCCCAAGGGGCGCAGCAGCA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGTCCTACTGCCTCCATaGCCTCTAGCGCCACCCGTT +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEVLLPP*PLAPPV
Trigger: AACGGGTGGCGCTAGAGGCCATGGAGGCAGTAGGAC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGAATTGGAAAGTAACTaGAAGAACATTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSELESN*KNIFFS
Trigger: GGAGAAGAAAATGTTCTTCCAGTTACTTTCCAATTC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAACACTGTCACATCTaGTGGCTTGAGGGACTAAAT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEQHCHI*WLEGLN
Trigger: ATTTAGTCCCTCAAGCCACCAGATGTGACAGTGTTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTTGGCAGTTTGTGTCTaGTTATTACCCTCTTTCGCC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPLAVCV*LLPSFA
Trigger: GGCGAAAGAGGGTAATAACCAGACACAAACTGCCAA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGAAGGAGGGTGGTGCTaGGCCTTCCAGGTCACTGGT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIEGGWC*AFQVTG
Trigger: ACCAGTGACCTGGAAGGCCCAGCACCACCCTCCTTC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAGGAGCCAAACCTCTTaGCCTTTTCACCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLRSQTS*PFHLIC
Trigger: GCAGATGAGGTGAAAAGGCCAAGAGGTTTGGCTCCT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGACCACGAATCTGCTTaGACAGAAGAAGTGACCAGC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLDHESA*TEEVTS
Trigger: GCTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATTCGGCTTGCTGGCTTaGAGTGGGACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEFGLLA*SGTPGL
Trigger: GAGCCCAGGAGTCCCACTCCAAGCCAGCAAGCCGAA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCACGGGGCACACCTTaGAGAGAGAATGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPRGTP*RENAHH
Trigger: GTGGTGGGCATTCTCTCTCCAAGGTGTGCCCCGTGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TCCCTGGGGATTGATCAAATACACATCATACTTCCCAGCAGAGCGGCCAGATTTCTTTTCCCTGGGGATTaGTCAAATACACATCATACT +
Preference number: 4 (lower is better)
Translates to: SLGIDQIHIILPSRAARFLFPGD*SNTHHT
Trigger: AGTATGATGTGTATTTGATCAATCCCCAGGGAAAAG...AAATCTGGCCGCTCTGCTGGGAAGTATGATGTGTATTTGATCAATCCCCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTAAGACAACACACACTTaGCAGTTCATGGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLKTTHT*QFMAAA
Trigger: AGCTGCTGCCATGAACTGTCAAGTGTGTGTTGTCTT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTGTTTCACTCCTTCATaGTTACACCATAGTAAGGAA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLCFTPS*LHHSKE
Trigger: TTCCTTACTATGGTGTAATCATGAAGGAGTGAAACA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGCACAGGAAAGCCCTTaGAAGAAGCGAGGAAAAGAC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKAQESP*KKRGKD
Trigger: GTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGCGGCTGTTATTGATTaGAGCAGTGACAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPAAVID*SSDKSN
Trigger: GTTTGATTTGTCACTGCTTCAATCAATAACAGCCGC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAATATTCATTGACTACTaGCTCTGGAGCGGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEIFIDY*LWSGCY
Trigger: ATAACAGCCGCTCCAGAGTCAGTAGTCAATGAATAT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TTTCCTGTTCATAGTCTTTGTTCATTAGTGGTGACTTGCCCAGACCCTGCACACACTGCATCAAGGTCCTaGGTTTCAAGCAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: FPVHSLCSLVVTCPDPAHTASRS*VSSNRN
Trigger: ATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGT...GTGTGCAGGGTCTGGGCAAGTCACCACTAATGAACAAAGACTATGAACAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGAGTGTCCTCTCAACTaGTCTGTCGCTCTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKECPLN*SVALSL
Trigger: TAGAGACAGAGCGACAGAGCAGTTGAGAGGACACTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGTGGGAAATGCCTTTTaGTTTTTCTTACCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEVGNAF*FFLPGK
Trigger: CTTCCCTGGTAAGAAAAAGCAAAAGGCATTTCCCAC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGACTGCTGTCTCATTTaGTACTTTGATAAGGTACTT +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLDCCLI*YFDKVL
Trigger: AAGTACCTTATCAAAGTAGCAAATGAGACAGCAGTC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAAGGCGACCAGGCTGTaGCGACTACGTTCCGGACTT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIKATRL*RLRSGL
Trigger: AAGTCCGGAACGTAGTCGGCACAGCCTGGTCGCCTT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ATTAGCAAGCTACCGAGCAGGTGCAGGTATGAACATCAGCTGACGCTGGCTCTTATTTTTGTTCTCGTTTaGATCTCTTTGATTACCAGC +
Preference number: 4 (lower is better)
Translates to: ISKLPSRCRYEHQLTLALIFVLV*ISLITS
Trigger: GCTGGTAATCAAAGAGATGCAAACGAGAACAAAAAT...AAGAGCCAGCGTCAGCTGATGTTCATACCTGCACCTGCTCGGTAGCTTGCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTTCTCACCGAGGGTaGACACCAGCAGGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDISSHRG*TPAGAS
Trigger: TGAAGCCCCTGCTGGTGTCCACCCTCGGTGAGAAGA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACGTCCTTGCCAGTTTTaGATTGGGGCTGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTERPCQF*IGAGVG
Trigger: CCCCACACCAGCCCCAATCCAAAACTGGCAAGGACG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTGTGTCTTTTGATATaGGAATACAGCATCAACAGA +
Preference number: 4 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLCLLI*EYSINR
Trigger: TCTGTTGATGCTGTATTCCCATATCAAAAGACACAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAGCGAGCTGAGAAGCTaGGGCCGTTGGCTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDISELRS*GRWLVW
Trigger: CCAAACTAGCCAACGGCCCCAGCTTCTCAGCTCGCT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATTTCTCCACCCAACTTaGCAGTTTGTGTCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEFLHPT*QFVSGY
Trigger: ATAACCAGACACAAACTGCCAAGTTGGGTGGAGAAA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGCCCCTATCCCAGGCTaGGTGGGAAAGAGCATCATG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIAPIPG*VGKSIM
Trigger: CATGATGCTCTTTCCCACCCAGCCTGGGATAGGGGC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCTCCACTGCTTTGGGTaGCTTCTGGCTGATCTGGGC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDILHCFG*LLADLG
Trigger: GCCCAGATCAGCCAGAAGCCACCCAAAGCAGTGGAG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAGAATGCCCACCACCTaGCCTGTCCAGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIRMPTT*PVQEEL
Trigger: CAGCTCTTCCTGGACAGGCCAGGTGGTGGGCATTCT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACCCTGGAGGATGGGGTaGGATGTGACGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEPWRMG*DVTEVS
Trigger: AGACACTTCCGTCACATCCCACCCCATCCTCCAGGG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCCTGGAGGATGGGGTaGGATGTGACGGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPWRMG*DVTEVS
Trigger: AGACACTTCCGTCACATCCCACCCCATCCTCCAGGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACTTTTCCCTGGGGATTaGTCAAATACACATCATACT +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEELFPGD*SNTHHT
Trigger: AGTATGATGTGTATTTGATCAATCCCCAGGGAAAAG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCGAATGAAATAAAGTaGCGCTTGAAATGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPNEIK*RLKCCV
Trigger: AACACAGCATTTCAAGCGTCACTTTATTTCATTCGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTACCGCTACTGCCCTaGTGCACTACGCTAGACTCT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVPLLP*CTTLDS
Trigger: AGAGTCTAGCGTAGTGCAGCAGGGCAGTAGCGGTAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGACAACCTGGTCGGATaGTGCGCTCTCGTGGATAAG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIDNLVG*CALVDK
Trigger: CTTATCCACGAGAGCGCAGCATCCGACCAGGTTGTC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCAACAGAAGATTGTCTaGACCCGCACTGGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIQQKIV*TRTGAH
Trigger: GTGAGCGCCAGTGCGGGTGCAGACAATCTTCTGTTG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATGGCGTTCTACCTGGTaGAGCTCACAGGTTCCGAGA +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEWRSTW*SSQVPR
Trigger: TCTCGGAACCTGTGAGCTGCACCAGGTAGAACGCCA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTGGCGTTCTACCTGGTaGAGCTCACAGGTTCCGAGA +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIWRSTW*SSQVPR
Trigger: TCTCGGAACCTGTGAGCTGCACCAGGTAGAACGCCA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGATTATAATGCTCTCTaGTTTGGAAGAACAAGTTTC +
Preference number: 4 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLDYNAL*FGRTSF
Trigger: GAAACTTGTTCTTCCAAAGCAGAGAGCATTATAATC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCAGCTCTTCAGCTCTaGACACACACATCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPALQL*THTSPP
Trigger: AGGAGGGGATGTGTGTGTGCAGAGCTGAAGAGCTGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGAATTGGAAAGTAACTaGAAGAACATTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQELESN*KNIFFS
Trigger: GGAGAAGAAAATGTTCTTCCAGTTACTTTCCAATTC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCTGTTTGTTTTGAAGTaGGAACATGAAGACTCAATA +
Preference number: 4 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLFVLK*EHEDSI
Trigger: TATTGAGTCTTCATGTTCCCACTTCAAAACAAACAG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATGGAACTGTCAACTATaGTTCCTGATCACTAAAGAC +
Preference number: 4 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEWNCQL*FLITKD
Trigger: GTCTTTAGTGATCAGGAACCATAGTTGACAGTTCCA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCATGGATTGGGGGATGTaGCGTTTCTGGGTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIMDWGM*RFWVSP
Trigger: AGGGGACACCCAGAAACGCCACATCCCCCAATCCAT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGACAGAATGGGGGTTTaGGGGCAAAGAGATTTCCAA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKDRMGV*GQRDFQ
Trigger: TTGGAAATCTCTTTGCCCCCAAACCCCCATTCTGTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAGCTATTCGGCTTGCTaGCTTGGAGTGGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDISYSAC*LGVGLL
Trigger: CAGGAGTCCCACTCCAAGCCAGCAAGCCGAATAGCT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAACATCTAAGTTTTGCTaGCGATCGGGTGACAGCCAA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKTSKFC*RSGDSQ
Trigger: TTGGCTGTCACCCGATCGCCAGCAAAACTTAGATGT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCCTTCTGCACAGGGTaGCCTGTGTTACTGGCAATG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPFCTG*PVLLAM
Trigger: CATTGCCAGTAACACAGGCCACCCTGTGCAGAAGGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
3UTR CAA 72 bp AATCAACTCTGGTTAAATTCAATCACAAAGGAGTTCTaGGGCAGCAGATGTGTTGATGGGATGGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: NQLWLNSITKEF*GSRCVDGMGEE
Trigger: TTCTTCCCCCATCCCATCAACACATCTGCTGCCCAAGAACTCCTTTGTGATTGAATTTAACCAGAGTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR TCA 90 bp ATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTCTCCTTTTCCCTGGGGATTaGTCAAATACACATCATACT +
Preference number: 4 (lower is better)
Translates to: ILVGLLCNPLRVKSANSLLFPGD*SNTHHT
Trigger: AGTATGATGTGTATTTGATCAATCCCCAGGGAAAAG...GAGAGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACCCCCTGGCGAAGTTTaGAAAGGCATCTTGACAAGG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEPPGEV*KGILTR
Trigger: CCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAAAGGCGACTGACTCGTaGTGCCTTTGGGAAAGACGA +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEKATDS*CLWERR
Trigger: TCGTCTTTCCCAAAGGCATCACGAGTCAGTCGCCTT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAAACAGCTGACTCCCTaGAGTCTAGGACACAGGTCC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIKQLTP*SLGHRS
Trigger: GGACCTGTGTCCTAGACTTCAGGGAGTCAGCTGTTT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGCGGCTGTTATTGATTaGAGCAGTGACAAATCAAAC +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLAAVID*SSDKSN
Trigger: GTTTGATTTGTCACTGCTTCAATCAATAACAGCCGC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGGCTCGGCACACATTaGGTAACAGTCCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGLGTH*VTVLVI
Trigger: TATCACCAGGACTGTTACTCAATGTGTGCCGAGCCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGGATGGGGTGGGATGTaGCGGAAGTGTCTTAAACAG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIGWGGM*RKCLKQ
Trigger: CTGTTTAAGACACTTCCGTCACATCCCACCCCATCC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGGAGTACGGTCTCCTaGACAGATCGGATAGAAGAC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGSTVS*TDRIED
Trigger: GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTTATTCTTGTTGGTTTaGTTTGCAATCCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLLFLLV*FAIRSV
Trigger: CACGGAGCGGATTGCAAAGCAAACCAACAAGAATAA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCATGGTCATTTTATTaGCCTGGGAAGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPWSFY*PGKGRV
Trigger: CACCCTCCCCTTCCCAGGGCAATAAAATGACCATGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAACAGGCCATAGCCACTaGTCATATCCATCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKTGHSH*SYPSSL
Trigger: TAGAGAAGATGGATATGACCAGTGGCTATGGCCTGT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAAGTTTCGGAGCTTCGTaGGAACCCTATGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTESFGAS*EPYVLS
Trigger: GCTCAGCACATAGGGTTCCCACGAAGCTCCGAAACT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTTGGGAGTTCTGCATTaGTACCGCTACTGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDILGVLH*YRYCPA
Trigger: AGCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAAAATGTGTGGTGTTCTaGCCCCCTGTCTGCATCGAG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEKCVVF*PPVCIE
Trigger: CTCGATGCAGACAGGGGGCCAGAACACCACACATTT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGGAGCCTTCTGTCCTTaGAGGAAGAGTTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIGAFCP*RKSSGG
Trigger: TCCTCCAGAACTCTTCCTCCAAGGACAGAAGGCTCC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCACGGGGAAGCAGCTCTaGACAATGATTCCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDITGKQL*TMIPEA
Trigger: GGCTTCTGGAATCATTGTCCAGAGCTGCTTCCCCGT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGGGATGTGGCGTTTCTaGGTGTCCCCTGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIGMWRF*VSPVSF
Trigger: AAAAGACACAGGGGACACCCAGAAACGCCACATCCC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATTGGCACTGATGGATTaGGGGATGTGGCGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTELALMD*GMWRFW
Trigger: CCAGAAACGCCACATCCCCCAATCCATCAGTGCCAA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTTCATGCTTCGGGCCTaGAATGATGCCACCCAACAG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIFMLRA*NDATQQ
Trigger: CTGTTGGGTGGCATCATTCCAGGCCCGAAGCATGAA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATTCATGCTTCGGGCCTaGAATGATGCCACCCAACAG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEFMLRA*NDATQQ
Trigger: CTGTTGGGTGGCATCATTCCAGGCCCGAAGCATGAA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATGTAATTTTAGACCCTaGGGGAGGCAGTATCCTAAC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKCNFRP*GRQYPN
Trigger: GTTAGGATACTGCCTCCCCCAGGGTCTAAAATTACA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCACACACATCCCCTCCTaGCTCCCCTCAAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDITHIPS*LPSRKH
Trigger: ATGTTTCCTTGAGGGGAGCCAGGAGGGGATGTGTGT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCTTTTCCCTGGGGATTaGTCAAATACACATCATACT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLLFPGD*SNTHHT
Trigger: AGTATGATGTGTATTTGATCAATCCCCAGGGAAAAG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACAACTACTCCCACCCTaGAGCCACGAAACTCTAAGT +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEQLLPP*SHETLS
Trigger: ACTTAGAGTTTCGTGGCTTCAGGGTGGGAGTAGTTG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCACTTTCCTGTCCTGTaGAGCGTCCTTGCCAGTTTT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIHFPVL*SVLASF
Trigger: AAAACTGGCAAGGACGCTTCACAGGACAGGAAAGTG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCGAATGAAATAAAGTaGCGCTTGAAATGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPNEIK*RLKCCV
Trigger: AACACAGCATTTCAAGCGTCACTTTATTTCATTCGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACAGGTGGGGCCCGAATaGAATAAAGTGACGCTTGAA +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEQVGPE*NKVTLE
Trigger: TTCAAGCGTCACTTTATTTCATTCGGGCCCCACCTG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATCACTGTCACAGCAATaGAAAGCTGGGCAGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTESLSQQ*KAGQRS
Trigger: GCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGCATCTTCTCCTCTTTaGAGACGCTGCTGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEASSPL*RRCCSS
Trigger: ACTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAGGAGAGCAAGACCTTaGTGCTCTCTTGCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIRRARP*CSLALH
Trigger: GTGAAGAGCAAGAGAGCAGCAAGGTCTTGCTCTCCT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGCCTGTGGGTGTTTCTaGAAGCATAAGACTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIACGCF*KHKTAV
Trigger: GACAGCAGTCTTATGCTTCCAGAAACACCCACAGGC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCACACTTGACAGTTCATaGCAGCAGCTCACATGGGAC +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDITLDSS*QQLTWD
Trigger: GTCCCATGTGAGCTGCTGCCATGAACTGTCAAGTGT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATTTGAAAAGGCATCTTaGCAAGGAGCTTCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEFEKAS*QGASQD
Trigger: GTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTTAGGTCTTCAACCTaGCTGTGCTTGTCGGTAAGA +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVRSST*LCLSVR
Trigger: TCTTACCGACAAGCACAGTCAGGTTGAAGACCTAAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTTTGAAGTGGGAACATaGAGACTCAATAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLFEVGT*RLNSAN
Trigger: ATTTGCACTATTGAGTCTTCATGTTCCCACTTCAAA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCACAGGAGGCCTCTGTaGTTTCCTCAACTACCAAAT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIHRRPL*FPQLPN
Trigger: ATTTGGTAGTTGAGGAAAGCACAGAGGCCTCCTGTG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAACAGCAATGAAAAGCTaGGCAGAGAAGCAGGTGACA +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTETAMKS*AEKQVT
Trigger: TGTCACCTGCTTCTCTGCCCAGCTTTTCATTGCTGT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACTGTCAGGCTCCACTTaGGCTAAACCAATTCCAGAT +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTELSGST*AKPIPD
Trigger: ATCTGGAATTGGTTTAGCCCAAGTGGAGCCTGACAG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTCAACTATGGTTCCTaGTCACTAAAGACTGGCAAG +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVNYGS*SLKTGK
Trigger: CTTGCCAGTCTTTAGTGATCAGGAACCATAGTTGAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGAGCCGCTTACTAAGTaGTTTAAAATTCAGAGATTC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKEPLTK*FKIQRF
Trigger: GAATCTCTGAATTTTAAATCACTTAGTAAGCGGCTC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATGTAATTTTAGACCCTaGGGGAGGCAGTATCCTAAC +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTECNFRP*GRQYPN
Trigger: GTTAGGATACTGCCTCCCCCAGGGTCTAAAATTACA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCAATTACTCGTAGGATaGGGGAGAAGAAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIQLLVG*GRRKGH
Trigger: ATGTCCCTTTCTTCTCCCCCATCCTACGAGTAATTG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCATCTCTTTGATTACCAGCAGGCAGAACTCTTTTCCTATCTTCATTGGCCATTTTTCCTATCTTCATTaGCCATCTGTATCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: CISLITSRQNSFPIFIGHFSYLH*PSVSLL
Trigger: AAGAAGAGATACAGATGGCCAATGAAGATAGGAAAA...ATGGCCAATGAAGATAGGAAAAGAGTTCTGCCTGCTGGTAATCAAAGAGATGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675526.1
3UTR CAA 72 bp ATTCAAGCCAGTTTGCTCTCAGAGCATCTGTTTGTTTaGAAGTGGGAACATGAAGACTCAATAGTGCAAATA +
Preference number: 4 (lower is better)
Translates to: IQASLLSEHLFV*KWEHEDSIVQI
Trigger: TATTTGCACTATTGAGTCTTCATGTTCCCACTTCAAAACAAACAGATGCTCTGAGAGCAAACTGGCTTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCTAGTTTAGAAAAGTaGAAAGCTACTTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPSLEK*KATSGP
Trigger: AGGGCCAGAAGTAGCTTTGCACTTTTCTAAACTAGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGTGGGAAATGCCTTTTaGTTTTTCTTACCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEVGNAF*FFLPGK
Trigger: CTTCCCTGGTAAGAAAAAGCAAAAGGCATTTCCCAC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR GCA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAGATTATAATGCTCTCTaGTTTGGAAGAACAAGTTTC +
Preference number: 4 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKDYNAL*FGRTSF
Trigger: GAAACTTGTTCTTCCAAAGCAGAGAGCATTATAATC...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACGAAAGGCTTTTCCCTaGGGATTGATCAAATACACA +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTERKAFP*GLIKYT
Trigger: TGTGTATTTGATCAATCCCCAGGGAAAAGCCTTTCG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTTTCTCCACCCAACTTaGCAGTTTGTGTCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIFLHPT*QFVSGY
Trigger: ATAACCAGACACAAACTGCCAAGTTGGGTGGAGAAA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR TCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCATCCATTTGGGGCAATaGCACAGGCTAAAAATGTAT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIIHLGQ*HRLKMY
Trigger: ATACATTTTTAGCCTGTGTCATTGCCCCAAATGGAT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGTGCTTTCAGTCATTTaGCTATACACAAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEVLSVI*LYTKNL
Trigger: AAGGTTCTTTGTGTATAGCCAAATGACTGAAAGCAC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CCA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTGCTTTCAGTCATTTaGCTATACACAAAGAACCTT +
Preference number: 4 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVLSVI*LYTKNL
Trigger: AAGGTTCTTTGTGTATAGCCAAATGACTGAAAGCAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS CCA 90 bp GGGAGGCAAAGCCCAGAGATGGGGGTGAGAGCTCAGGAGCCCTTGTaGCGCACTCTCCCGACGGGAGGCGAAGTGCGCACGCGCGCCGGT +
Preference number: 5 (lower is better)
Translates to: GRQSPEMGVRAQEPL*RTLPTGGEVRTRAG
Trigger: ACCGGCGCGCGTGCGCACTTCGCCTCCCGTCGGGAGAGTGCGCCACAAGGGCTCCTGAGCTCTCACCCCCATCTCTGGGCTTTGCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS-3UTR CAA 90 bp GCCTCGGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGTTCCTGCCGGGGCGTTaGATCACCATGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: ASAAAAATTLPGFRPRFLFLPGR*ITMTWV
Trigger: CACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAA...CAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCCGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS GCA 90 bp GGACACGCTCGCACCTTAGAGCCTCTGGCGCCGAAGAGCCTCGGGTaGTGCTGGACGCACAGTCCCCTACCCACGGCTCCTGATGGGAAC +
Preference number: 5 (lower is better)
Translates to: GHARTLEPLAPKSLG*CWTHSPLPTAPDGN
Trigger: GTTCCCATCAGGAGCCGTGGGTAGGGGACTGTGCGTCCAGCAGCACCCGAGGCTCTTCGGCGCCAGAGGCTCTAAGGTGCGAGCGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 90 bp CACCCTCTGACGTGGCCGCCTTGGGTCTCGTGGTGCCGCTCCCTTTaGGGCGTCCCCGGCCTCTGCCAGTTCCTGGAGCTTTGGGAGATT +
Preference number: 5 (lower is better)
Translates to: HPLTWPPWVSWCRSL*GVPGLCQFLELWEI
Trigger: AATCTCCCAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGAGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATATGGAGCGCCGCTGTTaGGGGGAGGCAGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNMERRC*GEAEAS
Trigger: GGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCAT...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp TCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGCCTGAGGGTCGGCCTCAGCTTTCTGACGTGGCCGCCTaGGGTCTCGTGGTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: SPAFGPVSWEWPEGRPQLSDVAA*GLVVPL
Trigger: GAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGA...AAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS GCA 90 bp AGCAGCACTGGCCACTGGCACTGTGGCCTAGGAGCTCGTCTTTCCTaGAGCCCCAATGCCAGGAGACACGGCTCTCCTGCCTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SSTGHWHCGLGARLS*SPNARRHGSPAWPC
Trigger: GCAGGGCCAGGCAGGAGAGCCGTGTCTCCTGGCATTGGGGCTGCAGGAAAGACGAGCTCCTAGGCCACAGTGCCAGTGGCCAGTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS CCA 90 bp CACCCTCTGACGTGGCCGCCTTGGGTCTCGTGGTGCCGCTCCCTTTaGGGCGTCCCCGGCCTCTGCCAGTTCCTGGAGCTTTTCGAAGTA +
Preference number: 5 (lower is better)
Translates to: HPLTWPPWVSWCRSL*GVPGLCQFLELFEV
Trigger: TACTTCGAAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS CCA 90 bp GCCAGCACTGCCTGTGCGACCCTGCAAGGCAGCAGCACTGGCCACTaGCACTGTGGCCTAGGAGCTCGTCTTTCCTGCAGCCCCAATGCC +
Preference number: 5 (lower is better)
Translates to: ASTACATLQGSSTGH*HCGLGARLSCSPNA
Trigger: GGCATTGGGGCTGCAGGAAAGACGAGCTCCTAGGCCACAGTGCCAGTGGCCAGTGCTGCTGCCTTGCAGGGTCGCACAGGCAGTGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS-3UTR CAA 90 bp CAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGCCTATGGAGCGCCGCTGTTaGGGGGAGGCAGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QRLPPHSPAFGPVSWEWPMERRC*GEAEAS
Trigger: GGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCAT...AGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS TCA 90 bp GGGAGGGTGCTCACATTCCGAGGCCACAGCACTCCAAAGAACCTCTaGGCACCCTGGGGACACGCTCGCACCTTAGAGCCTCTGGCGCCG +
Preference number: 5 (lower is better)
Translates to: GRVLTFRGHSTPKNL*APWGHARTLEPLAP
Trigger: CGGCGCCAGAGGCTCTAAGGTGCGAGCGTGTCCCCAGGGTGCTCAGAGGTTCTTTGGAGTGCTGTGGCCTCGGAATGTGAGCACCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 90 bp CCACTGGCACTGTGGCCTAGGAGCTCGTCTTTCCTGCAGCCCCAATaGCAGGAGACACGGCTCTCCTGCCTGGCCCTGCTCCTCCTAGCA +
Preference number: 5 (lower is better)
Translates to: PLALWPRSSSFLQPQ*QETRLSCLALLLLA
Trigger: TGCTAGGAGGAGCAGGGCCAGGCAGGAGAGCCGTGTCTCCTGGCATTGGGGCTGCAGGAAAGACGAGCTCCTAGGCCACAGTGCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS CCA 90 bp CCAAACAGCCAGCACTGCCTGTGCGACCCTGCAAGGCAGCAGCACTaGCCACTGGCACTGTGGCCTAGGAGCTCGTCTTTCCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: PNSQHCLCDPARQQH*PLALWPRSSSFLQP
Trigger: GGGCTGCAGGAAAGACGAGCTCCTAGGCCACAGTGCCAGTGGCCAGTGCTGCTGCCTTGCAGGGTCGCACAGGCAGTGCTGGCTGTTTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS-3UTR CAA 90 bp TTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGGTGGTGCCGCTCCCTTaGGGGCGTCCCCGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LQVFSPFPLFSPRVDTSRVVPLP*GRPRPL
Trigger: CAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCAC...CCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp CAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGCCTACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: QRLPPHSPAFGPVSWEWPTVSRV*RFLMGS
Trigger: ACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGT...AGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp GGCGGCAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGCTTCACCACTTCCTaGACCTCGATGCTGACCGTC +
Preference number: 5 (lower is better)
Translates to: GGSGCHHTPRLSAPFLGNGFTTS*TSMLTV
Trigger: GACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCC...ATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTGCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS TCA 90 bp CAGAGTCTAGGCAGGGATGCAGGGAGCTGGTCTAGGTGCCATCCCTaGAGGGCATGGGCACCGGGACAGCGAAAGGGCGAGAGATCCAGG +
Preference number: 5 (lower is better)
Translates to: QSLGRDAGSWSRCHP*RAWAPGQRKGERSR
Trigger: CCTGGATCTCTCGCCCTTTCGCTGTCCCGGTGCCCATGCCCTTCAGGGATGGCACCTAGACCAGCTCCCTGCATCCCTGCCTAGACTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS GCA 90 bp CGGAGTGTCCGCAGGGCATCCAGAGAGGAGAGTGACCTCCGGGTCTaGCACGTGAGACTACTGCAGAGTCTAGGCAGGGATGCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: RSVRRASREESDLRV*HVRLLQSLGRDAGS
Trigger: GCTCCCTGCATCCCTGCCTAGACTCTGCAGTAGTCTCACGTGGCAGACCCGGAGGTCACTCTCCTCTCTGGATGCCCTGCGGACACTCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS-3UTR CAA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGTGGTGCCGCTCCCTTaGGGGCGTCCCCGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPAVVPLP*GRPRPL
Trigger: CAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCAC...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS GCA 90 bp CTGACTTTTCTTCCCTTAGAGCCTCTGGCGCCGAAGAGCCTCGGGTaGTGCTGGACGCACAGTCCCCTACCCACGGCTCCTGATGGGAAC +
Preference number: 5 (lower is better)
Translates to: LTFLPLEPLAPKSLG*CWTHSPLPTAPDGN
Trigger: GTTCCCATCAGGAGCCGTGGGTAGGGGACTGTGCGTCCAGCAGCACCCGAGGCTCTTCGGCGCCAGAGGCTCTAAGGGAAGAAAAGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496908.5
CDS CCA 90 bp CGTGGTGCCGCTCCCTTTGGGGCGTCCCCGGCCTCTGCCAGTTCCTaGAGCTTTGGGAGATTTGGGCTTCTTAGGTGGTTTCTGCTCTCG +
Preference number: 5 (lower is better)
Translates to: RGAAPFGASPASASS*SFGRFGLLRWFLLS
Trigger: CGAGAGCAGAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS CCA 90 bp CTGGTGACCGAAGCAGCTCCTTCTCTACACATCACTTTGGCCCGGTaGGGTCTCGTCAGAAATGGCCACCGTGAGGCCCCACACCCCAGC +
Preference number: 5 (lower is better)
Translates to: LVTEAAPSLHITLAR*GLVRNGHREAPHPS
Trigger: GCTGGGGTGTGGGGCCTCACGGTGGCCATTTCTGACGAGACCCCACCGGGCCAAAGTGATGTGTAGAGAAGGAGCTGCTTCGGTCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626422.2
ENST00000676382.1
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGTGGTGCCGCTCCCTTaGGGGCGTCCCCGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSVVPLP*GRPRPL
Trigger: CAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCAC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TCAGCTTTTCGCTTCCTGCCGGGGCGTTTGATCACCATGACCTGGGTGGATGTGTCTGACGTGGCCGCCTaGGGTCTCGTGGTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: SAFRFLPGRLITMTWVDVSDVAA*GLVVPL
Trigger: GAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGA...CACATCCACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAAGCGAAAAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS TCA 90 bp GCTCAGTGCTCGCTCAGTCACCAGGGTGCTGTCCTGGAAATGGCGTaGCCTTGGGTGAGGAGGCTCTTGCAGCTGAGGCTAACCGGAGTG +
Preference number: 5 (lower is better)
Translates to: AQCSLSHQGAVLEMA*PWVRRLLQLRLTGV
Trigger: CACTCCGGTTAGCCTCAGCTGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGCACTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488293.4
CDS CCA 90 bp TGCCTGTATACAAGGAAAGGCCTCACCTGGCTGCGCCGTGGAGGCTaGCCTGGCGTGTGGAGCAGGCAGAACATTAGCAAGCTACCGAGC +
Preference number: 5 (lower is better)
Translates to: CLYTRKGLTWLRRGG*PGVWSRQNISKLPS
Trigger: GCTCGGTAGCTTGCTAATGTTCTGCCTGCTCCACACGCCAGGCCAGCCTCCACGGCGCAGCCAGGTGAGGCCTTTCCTTGTATACAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS CCA 90 bp CAAGACCCTGGATGCAGCCGTTCCCTGAAGAGAGGCCTAGGCAGCTaGGAGACCAGGGCAGCAGGGACACTCAGACCTTGCATCACTCTG +
Preference number: 5 (lower is better)
Translates to: QDPGCSRSLKRGLGS*ETRAAGTLRPCITL
Trigger: CAGAGTGATGCAAGGTCTGAGTGTCCCTGCTGCCCTGGTCTCCCAGCTGCCTAGGCCTCTCTTCAGGGAACGGCTGCATCCAGGGTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS-3UTR CAA 90 bp CGTCGCTCTCCAGTGAGCCTCCTCTGGGCATCTTCTCCTCTTTGCAGACGCTGCTTGAGGGGTTTGTCCTaGAGGCCCTGGAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: RRSPVSLLWASSPLCRRCLRGLS*RPWRSW
Trigger: CCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAA...GCAGCGTCTGCAAAGAGGAGAAGATGCCCAGAGGAGGCTCACTGGAGAGCGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp TCGGCCCCGTTTCTTGGGAATGGCCTGAGGGTCGGCCTCAGCTTTTCGCTTCCTCGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: SAPFLGNGLRVGLSFSLPRVLRF*MGSTVS
Trigger: GGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCG...AGGAAGCGAAAAGCTGAGGCCGACCCTCAGGCCATTCCCAAGAAACGGGGCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp ACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTCCCAGGCTCCTCTCTGTTaGGCCTTGGCATGGAGGATG +
Preference number: 5 (lower is better)
Translates to: TPSRLSFWPRRQRLPPHSQAPLC*ALAWRM
Trigger: CATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTG...GGAGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCCACGGGGCACACCTaGGAGAGAGAATGCCCACCA +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPTGHT*ERECPP
Trigger: TGGTGGGCATTCTCTCTCCAAGGTGTGCCCCGTGGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS TCA 90 bp ATTCCAGCCTCGCTCAGTCACCAGGGTGCTGTCCTGGAAATGGCGTaGCCTTGGGTGAGGAGGCTCTTGCAGCTGAGGCTAACCGGAGTG +
Preference number: 5 (lower is better)
Translates to: IPASLSHQGAVLEMA*PWVRRLLQLRLTGV
Trigger: CACTCCGGTTAGCCTCAGCTGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGGCTGGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460227.4
CDS GCA 90 bp TTGACAAGGAGCTTCCCAGGACTTTTCTCCAGGACCCTTTTCACCTaGACACCCTCTGACGTGGCCGCCTTGGGTCTCGTGGTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: LTRSFPGLFSRTLFT*TPSDVAALGLVVPL
Trigger: GAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGGTGAAAAGGGTCCTGGAGAAAAGTCCTGGGAAGCTCCTTGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000407218.5
ENST00000453960.7
ENST00000628176.2
CDS GCA 90 bp TATTTTTATGGAGCCTTAGAGCCTCTGGCGCCGAAGAGCCTCGGGTaGTGCTGGACGCACAGTCCCCTACCCACGGCTCCTGATGGGAAC +
Preference number: 5 (lower is better)
Translates to: YFYGALEPLAPKSLG*CWTHSPLPTAPDGN
Trigger: GTTCCCATCAGGAGCCGTGGGTAGGGGACTGTGCGTCCAGCAGCACCCGAGGCTCTTCGGCGCCAGAGGCTCTAAGGCTCCATAAAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000415944.3
CDS CCA 90 bp GCCTCTGCCAGTTCCTGGAGCTTTGGGAGATTTGGGCTTCTTAGGTaGTTTCTGCTCTCGCCGGGAGGGGCTCCCTCTCCCAGTTACCGT +
Preference number: 5 (lower is better)
Translates to: ASASSWSFGRFGLLR*FLLSPGGAPSPSYR
Trigger: ACGGTAACTGGGAGAGGGAGCCCCTCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGGCAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGTGGTGCCGCTCCCTTaGGGGCGTCCCCGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLVVPLP*GRPRPL
Trigger: CAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCAC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTCTGACGTGGCCGCCTaGGGTCTCGTGGTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSSDVAA*GLVVPL
Trigger: GAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CTTGACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACCGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: LDLDADRLPGLALLDGEYRVLRF*MGSTVS
Trigger: GGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCG...GTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGGGCCGTTGGCTAGTTaGGCACTGATGGATTGGGGG +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDGPLAS*ALMDWG
Trigger: CCCCCAATCCATCAGTGCCAAACTAGCCAACGGCCC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS TCA 90 bp TTTCTTCCCTCGCTCAGTCACCAGGGTGCTGTCCTGGAAATGGCGTaGCCTTGGGTGAGGAGGCTCTTGCAGCTGAGGCTAACCGGAGTG +
Preference number: 5 (lower is better)
Translates to: FLPSLSHQGAVLEMA*PWVRRLLQLRLTGV
Trigger: CACTCCGGTTAGCCTCAGCTGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGGGAAGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463644.5
CDS-3UTR CAA 90 bp TTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGTTGAGGGGTTTGTCCTaGAGGCCCTGGAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LQVFSPFPLFSPRVDTSRLRGLS*RPWRSW
Trigger: CCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAA...CCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp TTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGTCATCATACATGGGATGGAGCGCCGCTGTTaGGGGGAGGCAGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LLKLPCPAFRQGGVIIHGMERRC*GEAEAS
Trigger: GGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCAT...CCCATGTATGATGACCCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CAA 90 bp TTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCAGGTTCACGGCTTTCTTTTaGGCCTCGGCGGCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: LQVFSPFPLFSPRVDTSRFTAFF*ASAAAA
Trigger: AGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAA...CCTGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp ATGTCTTTGCGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCTGCGGCCGTGGCGGGCTTCACCACTTCCTaGACCTCGATGCTGACCGTC +
Preference number: 5 (lower is better)
Translates to: MSLRSPSPRCLYFSAAVAGFTTS*TSMLTV
Trigger: GACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCC...CGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp CGTCTCCCGGGTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGGGCATCTTCTCCTCTTaGCAGACGCTGCTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: RLPGLALLDGEYGLLHRSGIFSS*QTLLLK
Trigger: CTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGCC...CGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp CAGGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCCTCCCCTCGGTGTTaGTACTTTTCTGCGGCCGTG +
Preference number: 5 (lower is better)
Translates to: QGSYRSSVLSRSSHRGWTPSPRC*YFSAAV
Trigger: CACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGG...TGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp AGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTGATGAAACAATGTCTTaGCGCTCTCCCTCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: RLLHGFLFGLGGSGCHHTDETMS*RSPSPR
Trigger: CCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCATC...AGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGTCCCAGCTCGGGTCTaGGGAGTTCTGCATTGGTAC +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDVPARV*GVLHWY
Trigger: GTACCAATGCAGAACTCCCAAGACCCGAGCTGGGAC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCAGCGGGAGCTGGGGGTaGTGCTCCCTCCTTGCACTG +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSSGSWG*CSLLAL
Trigger: CAGTGCAAGGAGGGAGCACAACCCCCAGCTCCCGCT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS GCA 90 bp CCAGTTCCTGGAGCTTTGGGAGATTTGGGCTTCTTAGGTGGTTTCTaGTCTCGCCGGGAGGGGCTCCCTCTCCCAGTTACCGTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: PVPGALGDLGFLGGF*SRREGLPLPVTVKS
Trigger: TGACTTCACGGTAACTGGGAGAGGGAGCCCCTCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000486506.5
CDS GCA 90 bp AGTGAATCCAAACGTGCCTGTATACAAGGAAAGGCCTCACCTGGCTaGGCCGTGGAGGCTGGCCTGGCGTGTGGAGCAGGCAGAACATTA +
Preference number: 5 (lower is better)
Translates to: SESKRACIQGKASPG*AVEAGLACGAGRTL
Trigger: TAATGTTCTGCCTGCTCCACACGCCAGGCCAGCCTCCACGGCGCAGCCAGGTGAGGCCTTTCCTTGTATACAGGCACGTTTGGATTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS CCA 90 bp GAGGAAGTCACTGAGGAGGGCCTCAGTGCCCCAGGGACAGTAGCATaGAGGATGGTTACGCCAGAGGATGGATCGACTTCTAGCCATGTG +
Preference number: 5 (lower is better)
Translates to: EEVTEEGLSAPGTVA*RMVTPEDGSTSSHV
Trigger: CACATGGCTAGAAGTCGATCCATCCTCTGGCGTAACCATCCTCCATGCTACTGTCCCTGGGGCACTGAGGCCCTCCTCAGTGACTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481807.3
CDS-3UTR CAA 90 bp AGGCCCTGGAGGTCCTGGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGTACCATGGAATCCTGTaGGAGCTGGTCTACAGAAGC +
Preference number: 5 (lower is better)
Translates to: RPWRSWSSDFSSLAAPWRYHGIL*ELVYRS
Trigger: GCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTA...CCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CAA 90 bp AGACTCCTTCACGGCTTTCTTTTTGGCCTCGGCGGCAGCGGCTGCCACCACACTTTAAACTTGAGGGGTTaGTCCTTGAGGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: RLLHGFLFGLGGSGCHHTLNLRG*SLRPWR
Trigger: CCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAA...AGTGTGGTGGCAGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAAGGAGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAATGGAGCGCCGCTGTTaGGGGGAGGCAGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPMERRC*GEAEAS
Trigger: GGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCAT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTCTGACGTGGCCGCCTaGGGTCTCGTGGTGCCGCTC +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQSDVAA*GLVVPL
Trigger: GAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAGCCGACAAGTGTGGTaGGGCACCGCGGCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQSRQVW*GTAAAW
Trigger: CCAGGCAGCCGCGGTGCCCAACCACACTTGTCGGCT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAGGAGCCTTCTGTCCTaGGAGGAAGAGTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDRSLLS*EEEFWR
Trigger: CCTCCAGAACTCTTCCTCCAAGGACAGAAGGCTCCT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCATGGGCAACTGCCTCTTaGAGGGAGCTGCAGGTGGGG +
Preference number: 5 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPWATAS*RELQVG
Trigger: CCCCACCTGCAGCTCCCTCAAAGAGGCAGTTGCCCA...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGTTGTGCTCCCTCCTaGCACTGCCCTCACACCTGC +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGCAPS*HCPHTC
Trigger: GCAGGTGTGAGGGCAGTGCAAGGAGGGAGCACAACC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAGAGATGTCACAGTGTaGAGCCCTGGAGGATGGGGT +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDRDVTV*SPGGWG
Trigger: ACCCCATCCTCCAGGGCTCAACACTGTGACATCTCT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS TCA 90 bp AACTTGCCCCATCTGGTACCGGTGATCCCGAGCGCTCCAGGGCGATaGGAGCCCGTTACCTACTATGTCCCACTCCACTTATGTAACTGG +
Preference number: 5 (lower is better)
Translates to: NLPHLVPVIPSAPGR*EPVTYYVPLHLCNW
Trigger: CCAGTTACATAAGTGGAGTGGGACATAGTAGGTAACGGGCTCTCATCGCCCTGGAGCGCTCGGGATCACCGGTACCAGATGGGGCAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 90 bp AGGTCCTGGTCTTCTGACTTTTCTTCCCTCGCTCAGTCACCAGGGTaGTGTCCTGGAAATGGCGTGACCTTGGGTGAGGAGGCTCTTGCA +
Preference number: 5 (lower is better)
Translates to: RSWSSDFSSLAQSPG*CPGNGVTLGEEALA
Trigger: TGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGGGAAGAAAAGTCAGAAGACCAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463644.5
CDS-3UTR CAA 90 bp TGTCCAGCCTTCAGGCAGGGTGGGGTCATCATACATGGGTCCCCGGTCACGGATTACCATGGAATCCTGTaGGAGCTGGTCTACAGAAGC +
Preference number: 5 (lower is better)
Translates to: CPAFRQGGVIIHGSPVTDYHGIL*ELVYRS
Trigger: GCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTA...ATCCGTGACCGGGGACCCATGTATGATGACCCCACCCTGCCTGAAGGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CAA 90 bp AAGTCAGCTAACTCTCTCGGTCACGGGCGTCCGGCTGTCCACAGGCTCCTCTCTTACCATGGAATCCTGTaGGAGCTGGTCTACAGAAGC +
Preference number: 5 (lower is better)
Translates to: KSANSLGHGRPAVHRLLSYHGIL*ELVYRS
Trigger: GCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTA...AGAGAGGAGCCTGTGGACAGCCGGACGCCCGTGACCGAGAGAGTTAGCTGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCATTGAGGGGTTTGTCCTaGAGGCCCTGGAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPLRGLS*RPWRSW
Trigger: CCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAA...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCTTAAACTTGAGGGGTTaGTCCTTGAGGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GLLQVFSPFPLFSPRVDTLNLRG*SLRPWR
Trigger: CCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAA...GGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCCCTCCCCTCGGTGTTaGTACTTTTCTGCGGCCGTG +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSPSPRC*YFSAAV
Trigger: CACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CAGCGGCTGCCACCACACTCCCCGGCTTTCGGCCCCGTTTCTTGGGAATGGCCTTTTATTCTTGTTGGTTaGCTTTGCAATCCGCTCCGT +
Preference number: 5 (lower is better)
Translates to: QRLPPHSPAFGPVSWEWPFILVG*LCNPLR
Trigger: ACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA...AGGCCATTCCCAAGAAACGGGGCCGAAAGCCGGGGAGTGTGGTGGCAGCCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGCATGGAGCCCCTGTaGGGCCACTCGATGACTGGC +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGMEPL*GHSMTG
Trigger: GCCAGTCATCGAGTGGCCCAACAGGGGCTCCATGCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTTTGGCACTGATGGATaGGGGGATGTGGCGTTTCTG +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDFGTDG*GDVAFL
Trigger: CAGAAACGCCACATCCCCCAATCCATCAGTGCCAAA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAGCGGGAGCTGGGGGTaGTGCTCCCTCCTTGCACTG +
Preference number: 5 (lower is better)
Translates to: TWHRKALERSEEKTTNLLSGSWG*CSLLAL
Trigger: CAGTGCAAGGAGGGAGCACAACCCCCAGCTCCCGCT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAGTTCTGCAAGCCTTTaGCACTCCACTGTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDSSASL*HSTVQL
Trigger: GAGCTGGACAGTGGAGTGCAAAAGGCTTGCAGAACT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTCAGGCAGGGTGGGGTCATCATACATGGGTCCCCGGTCACGGATGATGGAGCGGACTTTTCTTCCGTGTaGATGGGATGGGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: FRQGGVIIHGSPVTDDGADFSSV*MGWGKK
Trigger: CTTCTTCCCCCATCCCATCAACACGGAAGAAAAGTC...CGCTCCATCATCCGTGACCGGGGACCCATGTATGATGACCCCACCCTGCCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS TCA 90 bp TCTCTTCTGGCTACAGAGGTTGCAAAAGACGTCTGCAAGGGTCAGTaGGGGCCCAAAGGAGTAGTAACCAAGGCCCTGAAGCCTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SLLATEVAKDVCKGQ*GPKGVVTKALKPAW
Trigger: CCAGGCAGGCTTCAGGGCCTTGGTTACTACTCCTTTGGGCCCTCACTGACCCTTGCAGACGTCTTTTGCAACCTCTGTAGCCAGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS GCA 90 bp TGCGTGTACATAGAACACCTCAAAAGACACAGACAAGACCCTGGATaGAGCCGTTCCCTGAAGAGAGGCCTAGGCAGCTGGGAGACCAGG +
Preference number: 5 (lower is better)
Translates to: CVYIEHLKRHRQDPG*SRSLKRGLGSWETR
Trigger: CCTGGTCTCCCAGCTGCCTAGGCCTCTCTTCAGGGAACGGCTGCATCCAGGGTCTTGTCTGTGTCTTTTGAGGTGTTCTATGTACACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS CCA 90 bp GTTTGGGACATATCAGTAGTCCGTTGGACACTGGTGGCTTGGAGATaGCGGAAGATGAGGTGGAGGAAGTCACTGAGGAGGGCCTCAGTG +
Preference number: 5 (lower is better)
Translates to: VWDISVVRWTLVAWR*RKMRWRKSLRRASV
Trigger: CACTGAGGCCCTCCTCAGTGACTTCCTCCACCTCATCTTCCGCCATCTCCAAGCCACCAGTGTCCAACGGACTACTGATATGTCCCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481807.3
CDS-3UTR CAA 90 bp TTTCCTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGTTGAGGGGTTTGTCCTaGAGGCCCTGGAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: FPCPDPAHCIKVLSFKQQLRGLS*RPWRSW
Trigger: CCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAA...CTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CAA 90 bp CGGGCTCAGCAGAGTGGTGGGCTGATGGCTGCACGGGCTCATGCTTGCCCTCTTTTCACCTTTTTAAACTaGAGGGGTTTGTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RAQQSGGLMAARAHACPLFTFLN*RGLSLR
Trigger: CCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAA...AAGAGGGCAAGCATGAGCCCGTGCAGCCATCAGCCCACCACTCTGCTGAGCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAATGGAGCGCCGCTGTTaGGGGGAGGCAGAAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLMERRC*GEAEAS
Trigger: GGAAGCTTCTGCCTCCCCCAAACAGCGGCGCTCCAT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp GCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGACTTTTACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: APWRSLKRHLDKELPRTFTVSRV*RFLMGS
Trigger: ACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGT...AAAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp GGGCTCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCCCTCTCTGTTTGGCCTaGGCATGGAGGATGAAACAA +
Preference number: 5 (lower is better)
Translates to: GLLQVFSPFPLFSPRVDTPLCLA*AWRMKQ
Trigger: TTGTTTCATCCTCCATGCCAAGGCCAAACAGAGAGG...GGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATGTGGATAAGTGTCCTTaGGTAGTGCCAGGAGTTCGA +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDVDKCP*VVPGVR
Trigger: TCGAACTCCTGGCACTACCAAAGGACACTTATCCAC...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGGTTGTGCTCCCTCCTaGCACTGCCCTCACACCTGC +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLGCAPS*HCPHTC
Trigger: GCAGGTGTGAGGGCAGTGCAAGGAGGGAGCACAACC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATAGACCACGAATCTGCTaGGACAGAAGAAGTGACCAG +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDRPRIC*DRRSDQ
Trigger: CTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTCT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS CCA 90 bp GTCACATGTCACATCAAAGCAGGAACTGGTGAGTCTGTATTTTTATaGAGCAGTCTCTCCTCCTCGCCTCCTCCTCCTCCTCCGCTCGGC +
Preference number: 5 (lower is better)
Translates to: VTCHIKAGTGESVFL*SSLSSSPPPPPPLG
Trigger: GCCGAGCGGAGGAGGAGGAGGAGGCGAGGAGGAGAGACTGCTCCATAAAAATACAGACTCACCAGTTCCTGCTTTGATGTGACATGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000369957.5
ENST00000627864.1
ENST00000628176.2
CDS CCA 90 bp CCTCCCTATCCTGTATCTTCCTCCAGAAGTTTAGGGCCCAGAGTGTaGCTGCCAGAGTCACCTAGAGCCACTGCATACACAAAGGCATCC +
Preference number: 5 (lower is better)
Translates to: PPYPVSSSRSLGPRV*LPESPRATAYTKAS
Trigger: GGATGCCTTTGTGTATGCAGTGGCTCTAGGTGACTCTGGCAGCCACACTCTGGGCCCTAAACTTCTGGAGGAAGATACAGGATAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625300.1
ENST00000626422.2
CDS CCA 90 bp TGTCTGCGTGTACATAGAACACCTCAAAAGACACAGACAAGACCCTaGATGCAGCCGTTCCCTGAAGAGAGGCCTAGGCAGCTGGGAGAC +
Preference number: 5 (lower is better)
Translates to: CLRVHRTPQKTQTRP*MQPFPEERPRQLGD
Trigger: GTCTCCCAGCTGCCTAGGCCTCTCTTCAGGGAACGGCTGCATCCAGGGTCTTGTCTGTGTCTTTTGAGGTGTTCTATGTACACGCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS-3UTR CAA 90 bp AGCCTTGCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGGCCCCCTGGCGAAGTTaGAAAAGGCATCTTGACAAG +
Preference number: 5 (lower is better)
Translates to: SLAPWRSLKRHLDKELPRAPWRS*KRHLDK
Trigger: CTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC...CCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGCAAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATTCACGGCTTTCTTTTaGGCCTCGGCGGCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLFTAFF*ASAAAA
Trigger: AGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGGCATCTTCTCCTCTTaGCAGACGCTGCTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSGIFSS*QTLLLK
Trigger: CTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGCC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGTCTTAGCTGGCTCCTaGGGGCAGCCGTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEVLAGS*GQPSLS
Trigger: GGAGAGCGACGGCTGCCCCAAGGAGCCAGCTAAGAC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGTCTTAGCTGGCTCCTaGGGGCAGCCGTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPVLAGS*GQPSLS
Trigger: GGAGAGCGACGGCTGCCCCAAGGAGCCAGCTAAGAC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGCATGGAGCCCCTGTaGGGCCACTCGATGACTGGC +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGMEPL*GHSMTG
Trigger: GCCAGTCATCGAGTGGCCCAACAGGGGCTCCATGCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGGCCGTTGGCTAGTTaGGCACTGATGGATTGGGGG +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGPLAS*ALMDWG
Trigger: CCCCCAATCCATCAGTGCCAAACTAGCCAACGGCCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCCACCCAACAGAAGATaGTCTGCACCCGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQPPNRR*SAPALA
Trigger: CGCCAGTGCGGGTGCAGACAATCTTCTGTTGGGTGG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATACCCAACTTGGCAGTTaGTGTCTGGTTATTACCCTC +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDTQLGS*CLVITL
Trigger: GAGGGTAATAACCAGACACAAACTGCCAAGTTGGGT...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAACCTCCAGATTCCCCTaGCCTGTAATGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPTSRFP*PVMLTR
Trigger: CCTGGTGAGCATTACAGGCAAGGGGAATCTGGAGGT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATCCAGGAAGAACAGCTTaGCCACTTGACACACAAACA +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDPGRTA*PLDTQT
Trigger: TGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTGG...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGATTCGGCTTGCTGGCTaGGAGTGGGACTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQIRLAG*EWDSWA
Trigger: AGCCCAGGAGTCCCACTCCAAGCCAGCAAGCCGAAT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAAGAGATGTCACAGTGTaGAGCCCTGGAGGATGGGGT +
Preference number: 5 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPRDVTV*SPGGWG
Trigger: ACCCCATCCTCCAGGGCTCAACACTGTGACATCTCT...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS TCA 90 bp AACCAACCCCTGAATTCGATCCTGTTATCTCACAGTCTGGGGTACTaGTCCCGCACAGCAGAGACACAACGTGTGAAAGGCTCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: NQPLNSILLSHSLGY*SRTAETQRVKGSAE
Trigger: CTCTGCCGAGCCTTTCACACGTTGTGTCTCTGCTGTGCGGGATCAGTACCCCAGACTGTGAGATAACAGGATCGAATTCAGGGGTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 90 bp TCCTGGGTCCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATG +
Preference number: 5 (lower is better)
Translates to: SWVLSPNIPATMESC*SWSTEARCILGSHM
Trigger: CATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGGACCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674996.1
ENST00000675841.1
CDS-3UTR CAA 90 bp TGTTTGGCCTTGGCATGGAGGATGAAACAATGTCTTTGCGCTCTCCCTCCCCTCTGCACGGGCTCATGCTaGCCCTCTTTCTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: CLALAWRMKQCLCALPPLCTGSC*PSFSSF
Trigger: GAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCA...GAGGGGAGGGAGAGCGCAAAGACATTGTTTCATCCTCCATGCCAAGGCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp TGTCTTTGCGCTCTCCCTCCCCTCGGTGTTTGTACTTTTCTGCGGCCGTGGCGGGCTTTTCCCTGGGGATaGATCAAATACACATCATAC +
Preference number: 5 (lower is better)
Translates to: CLCALPPLGVCTFLRPWRAFPWG*IKYTSY
Trigger: GTATGATGTGTATTTGATCAATCCCCAGGGAAAAGC...CCGCCACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGGAGAGCGCAAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCAGCCCCCTGGCGAAGTTaGAAAAGGCATCTTGACAAG +
Preference number: 5 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPAPWRS*KRHLDK
Trigger: CTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACAGGCTCCTCTCTGTTaGGCCTTGGCATGGAGGATG +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLQAPLC*ALAWRM
Trigger: CATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTATCTGCAGCAAGCCTaGTTGAAGGAGCCTAGTTTA +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDYLQQA*LKEPSL
Trigger: TAAACTAGGCTCCTTCAACAAGGCTTGCTGCAGATA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTTGGGAGTTCTGCATaGGTACCGCTACTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLGSSA*VPLLPC
Trigger: GCAGGGCAGTAGCGGTACCAATGCAGAACTCCCAAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGTCCCAGCTCGGGTCTaGGGAGTTCTGCATTGGTAC +
Preference number: 5 (lower is better)
Translates to: TWHRKALERSEEKTTNLLVPARV*GVLHWY
Trigger: GTACCAATGCAGAACTCCCAAGACCCGAGCTGGGAC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTGTCCCCTGTGTCTTTaGATATGGGAATACAGCATC +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDCPLCL*IWEYSI
Trigger: GATGCTGTATTCCCATATCAAAAGACACAGGGGACA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGAGAAGCTGGGGCCGTaGGCTAGTTTGGCACTGATG +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQEKLGP*ASLALM
Trigger: CATCAGTGCCAAACTAGCCAACGGCCCCAGCTTCTC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCCAGGGCGATAAACCGCCAAGGCTGCCTGCTGAAAGGCGACTGACTCGTGATTGGTTTTGCAGTGACTaGGAAAGTGGCAACACATCA +
Preference number: 5 (lower is better)
Translates to: CQGDKPPRLPAERRLTRDWFCSD*ESGNTS
Trigger: TGATGTGTTGCCACTTTCCAAGTCACTGCAAAACCA...ATCACGAGTCAGTCGCCTTTCAGCAGGCAGCCTTGGCGGTTTATCGCCCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGTCTTCTGACTTTTCTTCCCTGGCTGCGCCGTGGAGGCTGGCCTGGCGTGTGGCATTTTTGTTCTCGTTaGCATCTCTTTGATTACCAG +
Preference number: 5 (lower is better)
Translates to: GLLTFLPWLRRGGWPGVWHFCSR*HLFDYQ
Trigger: CTGGTAATCAAAGAGATGCAAACGAGAACAAAAATG...CCACACGCCAGGCCAGCCTCCACGGCGCAGCCAGGGAAGAAAAGTCAGAAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS CCA 90 bp GGGCATGGGCACCGGGACAGCGAAAGGGCGAGAGATCCAGGACTCTaGCTTCCGTTTCTCATGTTTTTGATACTGAGGTATTTAGCTTTC +
Preference number: 5 (lower is better)
Translates to: GHGHRDSERARDPGL*LPFLMFLILRYLAF
Trigger: GAAAGCTAAATACCTCAGTATCAAAAACATGAGAAACGGAAGCCAGAGTCCTGGATCTCTCGCCCTTTCGCTGTCCCGGTGCCCATGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS CCA 90 bp AGCGAGACTCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATG +
Preference number: 5 (lower is better)
Translates to: SETLSPNIPATMESC*SWSTEARCILGSHM
Trigger: CATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGAGTCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CAA 90 bp GTCTCCTGCACAGATCGGATAGAAGACTCCTTCACGGCTTTCTTTTTGGCCTCGTGCACGGGCTCATGCTaGCCCTCTTTCTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: VSCTDRIEDSFTAFFLASCTGSC*PSFSSF
Trigger: GAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCA...CGAGGCCAAAAAGAAAGCCGTGAAGGAGTCTTCTATCCGATCTGTGCAGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp GCGGCCAGATTTCCTTTGCTTAAGCTTCCGTGTCCAGCCTTCAGGCAGGGTGGGGCTTTTCCCTGGGGATaGATCAAATACACATCATAC +
Preference number: 5 (lower is better)
Translates to: AARFPLLKLPCPAFRQGGAFPWG*IKYTSY
Trigger: GTATGATGTGTATTTGATCAATCCCCAGGGAAAAGC...CCCACCCTGCCTGAAGGCTGGACACGGAAGCTTAAGCAAAGGAAATCTGGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPTVSRV*RFLMGS
Trigger: ACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGT...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACCCTCCCCTCGGTGTTaGTACTTTTCTGCGGCCGTG +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEPSPRC*YFSAAV
Trigger: CACGGCCGCAGAAAAGTACAAACACCGAGGGGAGGG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGATGAAACAATGTCTTaGCGCTCTCCCTCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: TWHRKALERSEEKTTNLLDETMS*RSPSPR
Trigger: CCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCATC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGATGAAACAATGTCTTaGCGCTCTCCCTCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLDETMS*RSPSPR
Trigger: CCGAGGGGAGGGAGAGCGCAAAGACATTGTTTCATC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGCGTCCTTGCCAGTTTaGGATTGGGGCTGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEASLPV*DWGWCG
Trigger: CCCACACCAGCCCCAATCCAAAACTGGCAAGGACGC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATCCTGTGAAGCGTCCTaGCCAGTTTTGGATTGGGGC +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLSCEAS*PVLDWG
Trigger: GCCCCAATCCAAAACTGGCAAGGACGCTTCACAGGA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAGGAGCCTTCTGTCCTaGGAGGAAGAGTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQRSLLS*EEEFWR
Trigger: CCTCCAGAACTCTTCCTCCAAGGACAGAAGGCTCCT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCACCCAACAGAAGATaGTCTGCACCCGCACTGGCG +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPPNRR*SAPALA
Trigger: CGCCAGTGCGGGTGCAGACAATCTTCTGTTGGGTGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTTGCTCCCTCCTGGGCTaGAGCCGCTTACTAAGTGAT +
Preference number: 5 (lower is better)
Translates to: TWHRKALERSEEKTTNLLCSLLG*SRLLSD
Trigger: ATCACTTAGTAAGCGGCTCAAGCCCAGGAGGGAGCA...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CTTTGTTCATTAGTGGTGACTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGTTCATTAGTGGTGACTaGCCCAGACCCTGCACACTG +
Preference number: 5 (lower is better)
Translates to: LCSLVVTCPDPAHCIKVLFISGD*PRPCTL
Trigger: CAGTGTGCAGGGTCTGGGCAAGTCACCACTAATGAA...CAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCACCACTAATGAACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS TCA 90 bp AAACAGCTAACCGGAGGGGCACCCGAGGAGACAAACTGCCAACTATaGAGAACAAAGCAGAGACCTCAACTTGTCACGTCTCAAGCTCAG +
Preference number: 5 (lower is better)
Translates to: KQLTGGAPEETNCQL*RTKQRPQLVTSQAQ
Trigger: CTGAGCTTGAGACGTGACAAGTTGAGGTCTCTGCTTTGTTCTTCATAGTTGGCAGTTTGTCTCCTCGGGTGCCCCTCCGGTTAGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 90 bp AGAGCAACATGCCAGAAAGCAGTTGTCTCTTCTGGCTACAGAGGTTaGAAAAGACGTCTGCAAGGGTCAGTGAGGGCCCAAAGGAGTAGT +
Preference number: 5 (lower is better)
Translates to: RATCQKAVVSSGYRG*KRRLQGSVRAQRSS
Trigger: ACTACTCCTTTGGGCCCTCACTGACCCTTGCAGACGTCTTTTGCAACCTCTGTAGCCAGAAGAGACAACTGCTTTCTGGCATGTTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS GCA 90 bp TTTTTCAAACTCCACAGCTTGCCTCCCTACCCTACTAGACTAGATTaGACAGAGGCAGGGCAGGCACGGGAAACGACTCTGGTTGGAAAT +
Preference number: 5 (lower is better)
Translates to: FFKLHSLPPYPTRLD*TEAGQARETTLVGN
Trigger: ATTTCCAACCAGAGTCGTTTCCCGTGCCTGCCCTGCCTCTGTGCAATCTAGTCTAGTAGGGTAGGGAGGCAAGCTGTGGAGTTTGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 90 bp TCCCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTGGAGCTaGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATGTCACAT +
Preference number: 5 (lower is better)
Translates to: SLSPNIPATMESCWS*STEARCILGSHMSH
Trigger: ATGTGACATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000415944.3
ENST00000628176.2
ENST00000630151.2
CDS CCA 90 bp CAGCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTGGAGCTaGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATGTCACAT +
Preference number: 5 (lower is better)
Translates to: QLSPNIPATMESCWS*STEARCILGSHMSH
Trigger: ATGTGACATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS CCA 90 bp ATCTTGCAGCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATG +
Preference number: 5 (lower is better)
Translates to: ILQLSPNIPATMESC*SWSTEARCILGSHM
Trigger: CATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGCTGCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS CCA 90 bp CCACTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTGGAGCTaGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATGTCACAT +
Preference number: 5 (lower is better)
Translates to: PLSPNIPATMESCWS*STEARCILGSHMSH
Trigger: ATGTGACATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS CCA 90 bp CAGAAACCACTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATG +
Preference number: 5 (lower is better)
Translates to: QKPLSPNIPATMESC*SWSTEARCILGSHM
Trigger: CATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGTGGTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS CCA 90 bp AAAGCACAAAGCACTAGCCATACAACTCCCACCAGCATAAATACGTaGAGTACAAAGAATGTCCTGTCAGCTGGGCCCAGAGCACACCCC +
Preference number: 5 (lower is better)
Translates to: KAQSTSHTTPTSINT*STKNVLSAGPRAHP
Trigger: GGGGTGTGCTCTGGGCCCAGCTGACAGGACATTCTTTGTACTCCACGTATTTATGCTGGTGGGAGTTGTATGGCTAGTGCTTTGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS CCA 90 bp GTCCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTGGAGCTaGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATGTCACAT +
Preference number: 5 (lower is better)
Translates to: VLSPNIPATMESCWS*STEARCILGSHMSH
Trigger: ATGTGACATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674996.1
ENST00000675841.1
CDS-3UTR CAA 90 bp CTTTGTTCATTAGTGGTGACTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGTACCATGGAATCCTGTaGGAGCTGGTCTACAGAAGC +
Preference number: 5 (lower is better)
Translates to: LCSLVVTCPDPAHCIKVLYHGIL*ELVYRS
Trigger: GCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTA...CAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCACCACTAATGAACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674996.1
CDS-3UTR CAA 90 bp GCAATCAACTCCACTTTAGAGCGAAAGGCTTTTCCCTGGGGATTGATCAAATACTTGAGGGGTTTGTCCTaGAGGCCCTGGAGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: AINSTLERKAFPWGLIKYLRGLS*RPWRSW
Trigger: CCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAA...GTATTTGATCAATCCCCAGGGAAAAGCCTTTCGCTCTAAAGTGGAGTTGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATTAAACTTGAGGGGTTaGTCCTTGAGGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLNLRG*SLRPWR
Trigger: CCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGCCCCCTGGCGAAGTTaGAAAAGGCATCTTGACAAG +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQAPWRS*KRHLDK
Trigger: CTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTCTCTTCACGGCTTTCTTTTaGGCCTCGGCGGCAGCGGCT +
Preference number: 5 (lower is better)
Translates to: ILVGLLCNPLRVKSANSLFTAFF*ASAAAA
Trigger: AGCCGCTGCCGCCGAGGCCAAAAAGAAAGCCGTGAA...GAGAGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCACCCAACTTGGCAGTTaGTGTCTGGTTATTACCCTC +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSTQLGS*CLVITL
Trigger: GAGGGTAATAACCAGACACAAACTGCCAAGTTGGGT...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGGACAGAATGGGGGTTaGGGGGCAAAGAGATTTCCA +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQGQNGG*GAKRFP
Trigger: TGGAAATCTCTTTGCCCCCAAACCCCCATTCTGTCC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTGAACAGCTTTGCCACTaGACACACAAACACTGCGGG +
Preference number: 5 (lower is better)
Translates to: TWHRKALERSEEKTTNLLEQLCH*THKHCG
Trigger: CCCGCAGTGTTTGTGTGTCAAGTGGCAAAGCTGTTC...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCCCAGGAAGAACAGCTTaGCCACTTGACACACAAACA +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSPGRTA*PLDTQT
Trigger: TGTTTGTGTGTCAAGTGGCAAAGCTGTTCTTCCTGG...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTAGGGCTCGGCACACATaGAGTAACAGTCCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: TWHRKALERSEEKTTNLLRARHT*SNSPGD
Trigger: ATCACCAGGACTGTTACTCAATGTGTGCCGAGCCCT...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAAGGGCTCGGCACACATaGAGTAACAGTCCTGGTGAT +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLRARHT*SNSPGD
Trigger: ATCACCAGGACTGTTACTCAATGTGTGCCGAGCCCT...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS TCA 90 bp AGGTGTATTCTGGGGAGTCACATGTCACATCAAAGCAGGAACTGGTaGGTCTGTATTTTTATGGAGCAGTCTCTCCTCCTCGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RCILGSHMSHQSRNW*VCIFMEQSLLLASS
Trigger: GGAGGAGGCGAGGAGGAGAGACTGCTCCATAAAAATACAGACTCACCAGTTCCTGCTTTGATGTGACATGTGACTCCCCAGAATACACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000369957.5
ENST00000627864.1
ENST00000628176.2
CDS TCA 90 bp CCTGTCAGCTGGGCCCAGAGCACACCCCACAGCAGTAAAAGAGAATaGCAATTTGAGTCACAGGATCAGGAGCAGAATCAAATTTGGGAC +
Preference number: 5 (lower is better)
Translates to: PVSWAQSTPHSSKRE*QFESQDQEQNQIWD
Trigger: GTCCCAAATTTGATTCTGCTCCTGATCCTGTGACTCAAATTGTCATTCTCTTTTACTGCTGTGGGGTGTGCTCTGGGCCCAGCTGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS GCA 90 bp CTGACCATGAGTCAGGAATATCAATTTTGTGGTGGAGCCCATTTCTaGTGTGACCAACCCACACCCGAACACACTCGCAACAGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: LTMSQEYQFCGGAHF*CDQPTPEHTRNRSN
Trigger: GTTGCTTCTGTTGCGAGTGTGTTCGGGTGTGGGTTGGTCACAGCAGAAATGGGCTCCACCACAAAATTGATATTCCTGACTCATGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 90 bp TTTTCTTCCCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATG +
Preference number: 5 (lower is better)
Translates to: FSSLSPNIPATMESC*SWSTEARCILGSHM
Trigger: CATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGGGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000415944.3
ENST00000628176.2
ENST00000630151.2
CDS CCA 90 bp GATCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTGGAGCTaGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATGTCACAT +
Preference number: 5 (lower is better)
Translates to: DLSPNIPATMESCWS*STEARCILGSHMSH
Trigger: ATGTGACATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611468.2
CDS CCA 90 bp AGAACAGATCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATG +
Preference number: 5 (lower is better)
Translates to: RTDLSPNIPATMESC*SWSTEARCILGSHM
Trigger: CATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGATCTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611468.2
CDS CCA 90 bp GATGTACAAACTTTGGGATCGTCAAGTGAGGCTCGTGTGTATGCCTaGGGATATGACTGTATTCCAGTGATCAGCCACCTAGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: DVQTLGSSSEARVYA*GYDCIPVISHLADL
Trigger: CAGGTCAGCTAGGTGGCTGATCACTGGAATACAGTCATATCCCCAGGCATACACACGAGCCTCACTTGACGATCCCAAAGTTTGTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 90 bp ACTCTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTGGAGCTaGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCACATGTCACAT +
Preference number: 5 (lower is better)
Translates to: TLSPNIPATMESCWS*STEARCILGSHMSH
Trigger: ATGTGACATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CAA 90 bp TCTTACAGGTCTTCAGTCCTTTCCCGCTCTTCTCACCGAGGGTGGACACCAGCATTCACCTTTTTAAACTaGAGGGGTTTGTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: SYRSSVLSRSSHRGWTPAFTFLN*RGLSLR
Trigger: CCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAA...TGCTGGTGTCCACCCTCGGTGAGAAGAGCGGGAAAGGACTGAAGACCTGTAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp TTTCTTCACCTTTTTAAACTTGAGGGGTTTGTCCTTGAGGCCCTGGAGGTCCTGTGCACGGGCTCATGCTaGCCCTCTTTCTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: FLHLFKLEGFVLEALEVLCTGSC*PSFSSF
Trigger: GAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCA...CAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGGAGCTTTGGGAGATTaGGGCTTCTTAGGTGGTTTC +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLGALGD*GFLGGF
Trigger: GAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCCAGTTCCTGGAGCTTaGGGAGATTTGGGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQPVPGA*GDLGFL
Trigger: TAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLRVLRF*MGSTVS
Trigger: GGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGGCATCTTCTCCTCTTaGCAGACGCTGCTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPGIFSS*QTLLLK
Trigger: CTTGAGCAGCAGCGTCTGCAAAGAGGAGAAGATGCC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACCTCTCTGTTTGGCCTaGGCATGGAGGATGAAACAA +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLPLCLA*AWRMKQ
Trigger: TTGTTTCATCCTCCATGCCAAGGCCAAACAGAGAGG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTCTTGTTGGTTTGCTTaGCAATCCGCTCCGTGTAAA +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSSCWFA*QSAPCK
Trigger: TTTACACGGAGCGGATTGCAAAGCAAACCAACAAGA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACTCTTGTTGGTTTGCTTaGCAATCCGCTCCGTGTAAA +
Preference number: 5 (lower is better)
Translates to: VLRFLMGSTVSCTDRIEDSCWFA*QSAPCK
Trigger: TTTACACGGAGCGGATTGCAAAGCAAACCAACAAGA...GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATCCTGTGAAGCGTCCTaGCCAGTTTTGGATTGGGGC +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEESCEAS*PVLDWG
Trigger: GCCCCAATCCAAAACTGGCAAGGACGCTTCACAGGA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACAAGACAACACACACTaGACAGTTCATGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLQDNTH*TVHGSS
Trigger: GCTGCTGCCATGAACTGTCAAGTGTGTGTTGTCTTG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AAAAACCCACAGCAAGCCCATGCCTCTAAGCCCCTACACCACAGCTATGGACCATGTCCCCTGTGTCTTTaGATATGGGAATACAGCATC +
Preference number: 5 (lower is better)
Translates to: KNPQQAHASKPLHHSYGPCPLCL*IWEYSI
Trigger: GATGCTGTATTCCCATATCAAAAGACACAGGGGACA...TGGTCCATAGCTGTGGTGTAGGGGCTTAGAGGCATGGGCTTGCTGTGGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTATTCGGCTTGCTGGCTaGGAGTGGGACTCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLIRLAG*EWDSWA
Trigger: AGCCCAGGAGTCCCACTCCAAGCCAGCAAGCCGAAT...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCATCAGCTATTCGGCTaGCTGGCTTGGAGTGGGACT +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPHQLFG*LAWSGT
Trigger: AGTCCCACTCCAAGCCAGCAAGCCGAATAGCTGATG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACATCAGCTATTCGGCTaGCTGGCTTGGAGTGGGACT +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEHQLFG*LAWSGT
Trigger: AGTCCCACTCCAAGCCAGCAAGCCGAATAGCTGATG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCTGGTTTTGCAGTGACTaGGAAAGTGGCAACACATCA +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSWFCSD*ESGNTS
Trigger: TGATGTGTTGCCACTTTCCAAGTCACTGCAAAACCA...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS TCA 90 bp GTCACAGGATCAGGAGCAGAATCAAATTTGGGACTTGAGGCAGTGTaGTGCTCTTCTGGTCTTCCGCTTCCTTCCACACCTTCTATTCTC +
Preference number: 5 (lower is better)
Translates to: VTGSGAESNLGLEAV*CSSGLPLPSTPSIL
Trigger: GAGAATAGAAGGTGTGGAAGGAAGCGGAAGACCAGAAGAGCATCACACTGCCTCAAGTCCCAAATTTGATTCTGCTCCTGATCCTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS TCA 90 bp CCATGGCACTCACTGGCAAGCATCCTTAGGAAACCAGAACTCAAATaGTGTAGGGAAGTTACCAAAGGCTGCTTAGTGCTGGGACTCAGA +
Preference number: 5 (lower is better)
Translates to: PWHSLASILRKPELK*CREVTKGCLVLGLR
Trigger: TCTGAGTCCCAGCACTAAGCAGCCTTTGGTAACTTCCCTACATCATTTGAGTTCTGGTTTCCTAAGGATGCTTGCCAGTGAGTGCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626422.2
CDS TCA 90 bp TATCACATCCAAGTAGGTATGGTTCCTGGATCACCAACCAACCCCTaGATTCGATCCTGTTATCTCACAGTCTGGGGTACTGATCCCGCA +
Preference number: 5 (lower is better)
Translates to: YHIQVGMVPGSPTNP*IRSCYLTVWGTDPA
Trigger: TGCGGGATCAGTACCCCAGACTGTGAGATAACAGGATCGAATTCAGGGGTTGGTTGGTGATCCAGGAACCATACCTACTTGGATGTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS TCA 90 bp AGGTGTATTCTGGGGAGTCACATGTCACATCAAAGCAGGAACTGGTaGGTCTGTATTTTTATGGAGCCCGGAATGATGCACACGCACAGG +
Preference number: 5 (lower is better)
Translates to: RCILGSHMSHQSRNW*VCIFMEPGMMHTHR
Trigger: CCTGTGCGTGTGCATCATTCCGGGCTCCATAAAAATACAGACTCACCAGTTCCTGCTTTGATGTGACATGTGACTCCCCAGAATACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000630151.2
CDS CCA 90 bp CCATGGAATCCTGTTGGAGCTGGTCTACAGAAGCAAGGTGTATTCTaGGGAGTCACATGTCACATCAAAGCAGGAACTGGTGAGTCTGTA +
Preference number: 5 (lower is better)
Translates to: PWNPVGAGLQKQGVF*GVTCHIKAGTGESV
Trigger: TACAGACTCACCAGTTCCTGCTTTGATGTGACATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303391.11
ENST00000369957.5
ENST00000415944.3
ENST00000611468.2
ENST00000627864.1
ENST00000628176.2
ENST00000630151.2
ENST00000674996.1
ENST00000675526.1
ENST00000675841.1
CDS CCA 90 bp CAGAGACCTCAACTTGTCACGTCTCAAGCTCAGATGTACAAACTTTaGGATCGTCAAGTGAGGCTCGTGTGTATGCCTGGGGATATGACT +
Preference number: 5 (lower is better)
Translates to: QRPQLVTSQAQMYKL*DRQVRLVCMPGDMT
Trigger: AGTCATATCCCCAGGCATACACACGAGCCTCACTTGACGATCCCAAAGTTTGTACATCTGAGCTTGAGACGTGACAAGTTGAGGTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATTAAACTTGAGGGGTTaGTCCTTGAGGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEELNLRG*SLRPWR
Trigger: CCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGCACGGGCTCATGCTaGCCCTCTTTCTCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPCTGSC*PSFSSF
Trigger: GAAAGAAGAGAAAGAGGGCAAGCATGAGCCCGTGCA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp AGCAAGGGAAGGAGCAGGCTTCAAGTTCTGCAAGCCTTTTGCACTCCACTGTCCGCTTTTCCCTGGGGATaGATCAAATACACATCATAC +
Preference number: 5 (lower is better)
Translates to: SKGRSRLQVLQAFCTPLSAFPWG*IKYTSY
Trigger: GTATGATGTGTATTTGATCAATCCCCAGGGAAAAGC...GGACAGTGGAGTGCAAAAGGCTTGCAGAACTTGAAGCCTGCTCCTTCCCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTCTTGCGCTTCTTGATGGGGAGTACGGTCTCCTGCACAGATCGGATAGAAGACGCTTTTCCCTGGGGATaGATCAAATACACATCATAC +
Preference number: 5 (lower is better)
Translates to: VLRFLMGSTVSCTDRIEDAFPWG*IKYTSY
Trigger: GTATGATGTGTATTTGATCAATCCCCAGGGAAAAGC...GTCTTCTATCCGATCTGTGCAGGAGACCGTACTCCCCATCAAGAAGCGCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAATTCCTGCCGGGGCGTTaGATCACCATGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKFLPGR*ITMTWV
Trigger: CACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAA...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTGTTGGAGGACGTCCCTaGAGAATGGACCATGCCACC +
Preference number: 5 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLVGGRP*RMDHAT
Trigger: GGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAAC...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACCTGGCACAGGAAAGCCCTTGAAAGAAGCGAGGAAAAGACCACGAATCTGCTTCTTTCTCCACCCAACTaGGCAGTTTGTGTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: TWHRKALERSEEKTTNLLLSPPN*AVCVWL
Trigger: TAACCAGACACAAACTGCCAAGTTGGGTGGAGAAAG...AAGCAGATTCGTGGTCTTTTCCTCGCTTCTTTCAAGGGCTTTCCTGTGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGACAGAATGGGGGTTaGGGGGCAAAGAGATTTCCA +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGQNGG*GAKRFP
Trigger: TGGAAATCTCTTTGCCCCCAAACCCCCATTCTGTCC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS CCA 90 bp CTAGGGGGAAAAGGCTACTGGGTGATAAGAGAATCCCTAGAGGGTTaGAGGAACAGGTTTGAGTCCAGTTGGCTAGGAACAATACTTCAA +
Preference number: 5 (lower is better)
Translates to: LGGKGYWVIRESLEG*RNRFESSWLGTILQ
Trigger: TTGAAGTATTGTTCCTAGCCAACTGGACTCAAACCTGTTCCTCCAACCCTCTAGGGATTCTCTTATCACCCAGTAGCCTTTTCCCCCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS CCA 90 bp CAACGTCTAGGCCACTCAGTATCACATCCAAGTAGGTATGGTTCCTaGATCACCAACCAACCCCTGAATTCGATCCTGTTATCTCACAGT +
Preference number: 5 (lower is better)
Translates to: QRLGHSVSHPSRYGS*ITNQPLNSILLSHS
Trigger: ACTGTGAGATAACAGGATCGAATTCAGGGGTTGGTTGGTGATCCAGGAACCATACCTACTTGGATGTGATACTGAGTGGCCTAGACGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 90 bp CTAACAAGAAAGCCACAGATGGGTTTCTTTGAGCTGTTAAGACACTaGAAAGGGCTGGTATGGAAGCCCAGTGGAGCCATTAGGACAATG +
Preference number: 5 (lower is better)
Translates to: LTRKPQMGFFELLRH*KGLVWKPSGAIRTM
Trigger: CATTGTCCTAATGGCTCCACTGGGCTTCCATACCAGCCCTTTCCAGTGTCTTAACAGCTCAAAGAAACCCATCTGTGGCTTTCTTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAATACCATGGAATCCTGTaGGAGCTGGTCTACAGAAGC +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEYHGIL*ELVYRS
Trigger: GCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTA...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000303391.11
CDS-3UTR CAA 90 bp GCCCCCTGGCGAAGTTTGAAAAGGCATCTTGACAAGGAGCTTCCCAGGACTTTTTTCACCTTTTTAAACTaGAGGGGTTTGTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: APWRSLKRHLDKELPRTFFTFLN*RGLSLR
Trigger: CCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAA...AAAAGTCCTGGGAAGCTCCTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 2 transcripts:
ENST00000407218.5
ENST00000628176.2
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCCAGTTCCTGGAGCTTaGGGAGATTTGGGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPPVPGA*GDLGFL
Trigger: TAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTCTTAGCTGGCTCCTaGGGGCAGCCGTCGCTCTCC +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVLAGS*GQPSLS
Trigger: GGAGAGCGACGGCTGCCCCAAGGAGCCAGCTAAGAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTGCTCCCTCCTGGGCTaGAGCCGCTTACTAAGTGAT +
Preference number: 5 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLCSLLG*SRLLSD
Trigger: ATCACTTAGTAAGCGGCTCAAGCCCAGGAGGGAGCA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTCTGCAGGTGTGAACTaGAAACAGGAATCCATTTGG +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQSAGVN*KQESIW
Trigger: CCAAATGGATTCCTGTTTCAAGTTCACACCTGCAGA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCCTGCACCCAGAACCTaGGGACCTCTTTCACAAGCA +
Preference number: 5 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLPAPRT*GPLSQA
Trigger: TGCTTGTGAAAGAGGTCCCAAGGTTCTGGGTGCAGG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTACTGGAGCGGCTGTTATaGATTGAAGCAGTGACAAAT +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLLERLL*IEAVTN
Trigger: ATTTGTCACTGCTTCAATCAATAACAGCCGCTCCAG...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGCTGGAGCGGCTGTTATaGATTGAAGCAGTGACAAAT +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQLERLL*IEAVTN
Trigger: ATTTGTCACTGCTTCAATCAATAACAGCCGCTCCAG...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GCAATCAACTCCACTTTAGAGCGAAAGGCTTTTCCCTGGGGATTGATCAAATACCCTGGAACGACAGGCTaGAGAACAGATCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: AINSTLERKAFPWGLIKYPGTTG*RTDLNP
Trigger: GGGATTCAGATCTGTTCTCAAGCCTGTCGTTCCAGG...GTATTTGATCAATCCCCAGGGAAAAGCCTTTCGCTCTAAAGTGGAGTTGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS TCA 90 bp CTACTGGGTGATAAGAGAATCCCTAGAGGGTTGGAGGAACAGGTTTaGGTCCAGTTGGCTAGGAACAATACTTCAAATCCTTCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: LLGDKRIPRGLEEQV*VQLARNNTSNPSAK
Trigger: CTTGGCAGAAGGATTTGAAGTATTGTTCCTAGCCAACTGGACTCAAACCTGTTCCTCCAACCCTCTAGGGATTCTCTTATCACCCAGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS TCA 90 bp CCTAAGGATTTAAACAGCACAGAAGTCGGAGTTCGGCTGACTGCATaGCACTCTCCTATCAATCGGGTGAAACAAAGACCCAGTACTCTA +
Preference number: 5 (lower is better)
Translates to: PKDLNSTEVGVRLTA*HSPINRVKQRPSTL
Trigger: TAGAGTACTGGGTCTTTGTTTCACCCGATTGATAGGAGAGTGTCATGCAGTCAGCCGAACTCCGACTTCTGTGCTGTTTAAATCCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS-3UTR CAA 90 bp TGCATCTCTTTGATTACCAGCAGGCAGAACTCTTTTCCTATCTTCATTGGCCATTTAAACTTGAGGGGTTaGTCCTTGAGGCCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: CISLITSRQNSFPIFIGHLNLRG*SLRPWR
Trigger: CCTCCAGGGCCTCAAGGACAAACCCCTCAAGTTTAA...ATGGCCAATGAAGATAGGAAAAGAGTTCTGCCTGCTGGTAATCAAAGAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGTTCACCTTTTTAAACTaGAGGGGTTTGTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQFTFLN*RGLSLR
Trigger: CCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAA...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGCTTTTCCCTGGGGATaGATCAAATACACATCATAC +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLAFPWG*IKYTSY
Trigger: GTATGATGTGTATTTGATCAATCCCCAGGGAAAAGC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTATTTATTCTTGTTGGTTaGCTTTGCAATCCGCTCCGT +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLFILVG*LCNPLR
Trigger: ACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000628176.2
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGCTGCAGCAAGCCTTGTaGAAGGAGCCTAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPLQQAL*KEPSLE
Trigger: TTCTAAACTAGGCTCCTTCAACAAGGCTTGCTGCAG...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GGGAAGCTTTGTCAGAGCCCTACCCATAAGGAGAAGAGACAACAGCTGCCTTTAGAGCATCTGTTTGTTTaGAAGTGGGAACATGAAGAC +
Preference number: 5 (lower is better)
Translates to: GKLCQSPTHKEKRQQLPLEHLFV*KWEHED
Trigger: GTCTTCATGTTCCCACTTCAAAACAAACAGATGCTC...TAAAGGCAGCTGTTGTCTCTTCTCCTTATGGGTAGGGCTCTGACAAAGCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCCACGGGGCACACCTaGGAGAGAGAATGCCCACCA +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPTGHT*ERECPP
Trigger: TGGTGGGCATTCTCTCTCCAAGGTGTGCCCCGTGGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTTCCTTGCCCAGACCCTGCACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGCTTTTCCTATCTTCATaGGCCATCTGTATCTCTTCT +
Preference number: 5 (lower is better)
Translates to: FPCPDPAHCIKVLSFKQQLFLSS*AICISS
Trigger: AGAAGAGATACAGATGGCCAATGAAGATAGGAAAAG...CTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675526.1
CDS TCA 90 bp GACCCAGACCCATGTGTGAGAAATAATAATTGCTGTTATAGCTACTaGGCTGCTGGTGCTGTTTGTTCCCTAGGACAAGATGATGGGTGT +
Preference number: 5 (lower is better)
Translates to: DPDPCVRNNNCCYSY*AAGAVCSLGQDDGC
Trigger: ACACCCATCATCTTGTCCTAGGGAACAAACAGCACCAGCAGCTCAGTAGCTATAACAGCAATTATTATTTCTCACACATGGGTCTGGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS TCA 90 bp AGAACAGATCTGAATCCCATCTTGCAGCTGACCCAGACCCATGTGTaGGAAATAATAATTGCTGTTATAGCTACTGAGCTGCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: RTDLNPILQLTQTHV*EIIIAVIATELLVL
Trigger: CAGCACCAGCAGCTCAGTAGCTATAACAGCAATTATTATTTCTCACACATGGGTCTGGGTCAGCTGCAAGATGGGATTCAGATCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS GCA 90 bp TCTTCCGCTTCCTTCCACACCTTCTATTCTCCTTCAGCCAAACCTTaGCCTCACATAATCCCTAAGCAGGCTATTTCTTATGGATGTCTA +
Preference number: 5 (lower is better)
Translates to: SSASFHTFYSPSAKP*PHIIPKQAISYGCL
Trigger: TAGACATCCATAAGAAATAGCCTGCTTAGGGATTATGTGAGGGCAAGGTTTGGCTGAAGGAGAATAGAAGGTGTGGAAGGAAGCGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS-3UTR CAA 90 bp TTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTGTAAAGTCAGCTAACTCTGCCCCCTGGCGAAGTTaGAAAAGGCATCTTGACAAG +
Preference number: 5 (lower is better)
Translates to: FILVGLLCNPLRVKSANSAPWRS*KRHLDK
Trigger: CTTGTCAAGATGCCTTTTCAAACTTCGCCAGGGGGC...AGAGTTAGCTGACTTTACACGGAGCGGATTGCAAAGCAAACCAACAAGAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000628176.2
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTTCCTGCCGGGGCGTTaGATCACCATGACCTGGGTG +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIFLPGR*ITMTWV
Trigger: CACCCAGGTCATGGTGATCAAACGCCCCGGCAGGAA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCC +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTERVLRF*MGSTVS
Trigger: GGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGT +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDITVSRV*RFLMGS
Trigger: ACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGTATCTGCAGCAAGCCTaGTTGAAGGAGCCTAGTTTA +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPYLQQA*LKEPSL
Trigger: TAAACTAGGCTCCTTCAACAAGGCTTGCTGCAGATA...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTCAAGACAACACACACTaGACAGTTCATGGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLQDNTH*TVHGSS
Trigger: GCTGCTGCCATGAACTGTCAAGTGTGTGTTGTCTTG...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAACAGGAGCCAAACCTCTaGGCCTTTTCACCTCATCTG +
Preference number: 5 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKQEPNL*AFSPHL
Trigger: CAGATGAGGTGAAAAGGCCAAGAGGTTTGGCTCCTG...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp ACAGTTAAGAGGACCAGTAGAGAGAACCTCATGTTTGGAACACAAAAGGAGAAAAGTTCTGCAAGCCTTTaGCACTCCACTGTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: TVKRTSRENLMFGTQKEKSSASL*HSTVQL
Trigger: GAGCTGGACAGTGGAGTGCAAAAGGCTTGCAGAACT...TTTCTCCTTTTGTGTTCCAAACATGAGGTTCTCTCTACTGGTCCTCTTAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGAGTGCTTTCAGTCATTaGGCTATACACAAAGAACCT +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQSAFSH*AIHKEP
Trigger: AGGTTCTTTGTGTATAGCCAAATGACTGAAAGCACT...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS GCA 90 bp AGCAATAAGAACTGTTTGCATTCAAGTCTAGACTTGCCCAGACCCTaGACACTGCATCAAGGTCCTGAGTTTCAAGCAACAGAAATCAAC +
Preference number: 5 (lower is better)
Translates to: SNKNCLHSSLDLPRP*TLHQGPEFQATEIN
Trigger: GTTGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCTAGACTTGAATGCAAACAGTTCTTATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS GCA 90 bp TGTTCATTAGTGGTGACTAGTGGTAAGTTAGCAATAAGAACTGTTTaGATTCAAGTCTTGCCCAGACCCTGCACACTGCATCAAGGTCCT +
Preference number: 5 (lower is better)
Translates to: CSLVVTSGKLAIRTV*IQVLPRPCTLHQGP
Trigger: AGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGACTTGAATGCAAACAGTTCTTATTGCTAACTTACCACTAGTCACCACTAATGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGGCTTCACCACTTCCTaGACCTCGATGCTGACCGTC +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIGFTTS*TSMLTV
Trigger: GACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGGCTTCACCACTTCCTaGACCTCGATGCTGACCGTC +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEGFTTS*TSMLTV
Trigger: GACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCAGGCTCCTCTCTGTTaGGCCTTGGCATGGAGGATG +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIQAPLC*ALAWRM
Trigger: CATCCTCCATGCCAAGGCCAAACAGAGAGGAGCCTG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGTTGGAGGACGTCCCTaGAGAATGGACCATGCCACC +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEVGGRP*RMDHAT
Trigger: GGTGGCATGGTCCATTCTCAAGGGACGTCCTCCAAC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGAGCATCTGTTTGTTTaGAAGTGGGAACATGAAGAC +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPEHLFV*KWEHED
Trigger: GTCTTCATGTTCCCACTTCAAAACAAACAGATGCTC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TTACCCTCTTTCGCCATCACTGTCACAGCAATGAAAAGCTGGGCAGAGAAGCAGGTCTCATTTGCTACTTaGATAAGGTACTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: LPSFAITVTAMKSWAEKQVSFAT*IRYFSV
Trigger: AACTGAGAAGTACCTTATCAAAGTAGCAAATGAGAC...CTGCTTCTCTGCCCAGCTTTTCATTGCTGTGACAGTGATGGCGAAAGAGGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp AGAAGAGACAACAGCTGCCTTTATTCTTGTTGGTTTGCTTTGCAATCCGCTCCGGTTTGGTTGCAGGACTaGCTTTTACAGCATAAGGAA +
Preference number: 5 (lower is better)
Translates to: RRDNSCLYSCWFALQSAPVWLQD*LLQHKE
Trigger: TTCCTTATGCTGTAAAAGCAAGTCCTGCAACCAAAC...CGGAGCGGATTGCAAAGCAAACCAACAAGAATAAAGGCAGCTGTTGTCTCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAACAAGTACAGACAAAATaGAAATTGAGGTCACACCCC +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEQVQTK*KLRSHP
Trigger: GGGGTGTGACCTCAATTTCAATTTTGTCTGTACTTG...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGAGAAGCTGGGGCCGTaGGCTAGTTTGGCACTGATG +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIEKLGP*ASLALM
Trigger: CATCAGTGCCAAACTAGCCAACGGCCCCAGCTTCTC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS GCA 90 bp ACACACCCCTCCGCCCCCGCCAAAGTAACTCAATCTCCACATATTTaGCTTTATATGTACCTTCTAACTCATGACTATGGCTTTGATTAT +
Preference number: 5 (lower is better)
Translates to: THPSAPAKVTQSPHI*LYMYLLTHDYGFDY
Trigger: ATAATCAAAGCCATAGTCATGAGTTAGAAGGTACATATAAAGGCAAATATGTGGAGATTGAGTTACTTTGGCGGGGGCGGAGGGGTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTCTTGTTGGTTTGCTTaGCAATCCGCTCCGTGTAAA +
Preference number: 5 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLSCWFA*QSAPCK
Trigger: TTTACACGGAGCGGATTGCAAAGCAAACCAACAAGA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAACCTCCAGATTCCCCTaGCCTGTAATGCTCACCAGG +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTETSRFP*PVMLTR
Trigger: CCTGGTGAGCATTACAGGCAAGGGGAATCTGGAGGT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACCTGCACCCAGAACCTaGGGACCTCTTTCACAAGCA +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEPAPRT*GPLSQA
Trigger: TGCTTGTGAAAGAGGTCCCAAGGTTCTGGGTGCAGG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAAGTGCTTTCAGTCATTaGGCTATACACAAAGAACCT +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEESAFSH*AIHKEP
Trigger: AGGTTCTTTGTGTATAGCCAAATGACTGAAAGCACT...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS TCA 90 bp AGAAACCCATTCACTGCCCATATTACATTTAGTCCACACAATTTCTaGGACAAAGCACAAAGCACTAGCCATACAACTCCCACCAGCATA +
Preference number: 5 (lower is better)
Translates to: RNPFTAHITFSPHNF*DKAQSTSHTTPTSI
Trigger: TATGCTGGTGGGAGTTGTATGGCTAGTGCTTTGTGCTTTGTCTCAGAAATTGTGTGGACTAAATGTAATATGGGCAGTGAATGGGTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS TCA 90 bp GAAATTACAAACATATACACACAGAATGCAAGCACCATAACCCTTTaGATACACAGTGGTTTGTGCCTTGCCCCAGACCTACCTAAGGAT +
Preference number: 5 (lower is better)
Translates to: EITNIYTQNASTITL*IHSGLCLAPDLPKD
Trigger: ATCCTTAGGTAGGTCTGGGGCAAGGCACAAACCACTGTGTATTCAAAGGGTTATGGTGCTTGCATTCTGTGTGTATATGTTTGTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS-3UTR CAA 90 bp CAACAAAAGGTGCAAACGCGTCACTTAGAAAGGCATGCTGAGTATTCTTTGCTTTTCACCTTTTTAAACTaGAGGGGTTTGTCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: QQKVQTRHLERHAEYSLLFTFLN*RGLSLR
Trigger: CCTCAAGGACAAACCCCTCAAGTTTAAAAAGGTGAA...AAGCAAAGAATACTCAGCATGCCTTTCTAAGTGACGCGTTTGCACCTTTTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTTTGGCACTGATGGATaGGGGGATGTGGCGTTTCTG +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIFGTDG*GDVAFL
Trigger: CAGAAACGCCACATCCCCCAATCCATCAGTGCCAAA...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GCCTATGCGCACAGTCTATGTGTTACTGGATATAATCAGGGTCACCAGGAAGAAGGTTTTCCTTCTAAATaGTTGAGAACTGACTTCAGT +
Preference number: 5 (lower is better)
Translates to: AYAHSLCVTGYNQGHQEEGFPSK*LRTDFS
Trigger: ACTGAAGTCAGTTCTCAACAATTTAGAAGGAAAACC...TTCTTCCTGGTGACCCTGATTATATCCAGTAACACATAGACTGTGCGCATAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACCTCTCTGTTTGGCCTaGGCATGGAGGATGAAACAA +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEPLCLA*AWRMKQ
Trigger: TTGTTTCATCCTCCATGCCAAGGCCAAACAGAGAGG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATGGGCTGATGGGAGTTaGGTTGCAGGACTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEWADGS*VAGLAF
Trigger: AAAAGCAAGTCCTGCAACCAAACTCCCATCAGCCCA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAGACCACGAATCTGCTaGGACAGAAGAAGTGACCAG +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIRPRIC*DRRSDQ
Trigger: CTGGTCACTTCTTCTGTCCAAGCAGATTCGTGGTCT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACTGCAGCAAGCCTTGTaGAAGGAGCCTAGTTTAGAA +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTELQQAL*KEPSLE
Trigger: TTCTAAACTAGGCTCCTTCAACAAGGCTTGCTGCAG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCTTTCTCCACCCAACTaGGCAGTTTGTGTCTGGTTA +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDILSPPN*AVCVWL
Trigger: TAACCAGACACAAACTGCCAAGTTGGGTGGAGAAAG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCCCAATTCAAGCCAGTTaGCTCTCAGAGCATCTGTTT +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIPIQAS*LSEHLF
Trigger: AAACAGATGCTCTGAGAGCAAACTGGCTTGAATTGG...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAATCTGCAGGTGTGAACTaGAAACAGGAATCCATTTGG +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTESAGVN*KQESIW
Trigger: CCAAATGGATTCCTGTTTCAAGTTCACACCTGCAGA...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGTTTGGTTGCAGGACTaGCTTTTACAGCATAAGGAA +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIVWLQD*LLQHKE
Trigger: TTCCTTATGCTGTAAAAGCAAGTCCTGCAACCAAAC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAACAAGTACAGACAAAATaGAAATTGAGGTCACACCCC +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEQVQTK*KLRSHP
Trigger: GGGGTGTGACCTCAATTTCAATTTTGTCTGTACTTG...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCAAGGAAACATCAATCTaGCCTTTCCTTAAAAGCACG +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIKETSI*PFLKST
Trigger: CGTGCTTTTAAGGAAAGGCAAGATTGATGTTTCCTT...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAAAGGAAACATCAATCTaGCCTTTCCTTAAAAGCACG +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEKETSI*PFLKST
Trigger: CGTGCTTTTAAGGAAAGGCAAGATTGATGTTTCCTT...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp GTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCTCTGTAAACACAGAAGTCTCATTTGCTACTTaGATAAGGTACTTCTCAGTT +
Preference number: 5 (lower is better)
Translates to: VLLSWTDLDIRDISVNTEVSFAT*IRYFSV
Trigger: AACTGAGAAGTACCTTATCAAAGTAGCAAATGAGAC...TTCTGTGTTTACAGAGATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS-3UTR CAA 90 bp TGCTACTTTGATAAGGTACTTCTCAGTTGGACAGATTTAGATATAAGAGACATCGGTTTTCCTTCTAAATaGTTGAGAACTGACTTCAGT +
Preference number: 5 (lower is better)
Translates to: CYFDKVLLSWTDLDIRDIGFPSK*LRTDFS
Trigger: ACTGAAGTCAGTTCTCAACAATTTAGAAGGAAAACC...GATGTCTCTTATATCTAAATCTGTCCAACTGAGAAGTACCTTATCAAAGTAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS GCA 72 bp GCACACCCTCTGACGTGGCCGCCTTGGGTCTCGTGGTaGCGCTCCCTTTGGGGCGTCCCCGGCCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: AHPLTWPPWVSW*RSLWGVPGLCQ
Trigger: CTGGCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000407218.5
ENST00000453960.7
ENST00000628176.2
CDS CCA 72 bp CCTGCACACCCTCTGACGTGGCCGCCTTGGGTCTCGTaGTGCCGCTCCCTTTGGGGCGTCCCCGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: PAHPLTWPPWVS*CRSLWGVPGLC
Trigger: GCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000407218.5
ENST00000453960.7
ENST00000628176.2
CDS CAA 90 bp AGGGGGAGGCAAAGCCCAGAGATGGGGGTGAGAGCTCAGGAGCCCTaGTGGCGCACTCTCCCGACGGGAGGCGAAGTGCGCACGCGCGCC +
Preference number: 6 (lower is better)
Translates to: RGRQSPEMGVRAQEP*WRTLPTGGEVRTRA
Trigger: GGCGCGCGTGCGCACTTCGCCTCCCGTCGGGAGAGTGCGCCACAAGGGCTCCTGAGCTCTCACCCCCATCTCTGGGCTTTGCCTCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 72 bp ACGTGGCCGCCTTGGGTCTCGTGGTGCCGCTCCCTTTaGGGCGTCCCCGGCCTCTGCCAGTTCCTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: TWPPWVSWCRSL*GVPGLCQFLEL
Trigger: AAGCTCCAGGAACTGGCAGAGGCCGGGGACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGGCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000407218.5
ENST00000453960.7
ENST00000628176.2
CDS GCA 72 bp GGAGCCTTAGAGCCTCTGGCGCCGAAGAGCCTCGGGTaGTGCTGGACGCACAGTCCCCTACCCACGGCTCCT +
Preference number: 6 (lower is better)
Translates to: GALEPLAPKSLG*CWTHSPLPTAP
Trigger: AGGAGCCGTGGGTAGGGGACTGTGCGTCCAGCAGCACCCGAGGCTCTTCGGCGCCAGAGGCTCTAAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415944.3
CDS GCA 72 bp CGCACCTTAGAGCCTCTGGCGCCGAAGAGCCTCGGGTaGTGCTGGACGCACAGTCCCCTACCCACGGCTCCT +
Preference number: 6 (lower is better)
Translates to: RTLEPLAPKSLG*CWTHSPLPTAP
Trigger: AGGAGCCGTGGGTAGGGGACTGTGCGTCCAGCAGCACCCGAGGCTCTTCGGCGCCAGAGGCTCTAAGGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 72 bp CCCTTTTCACCTGCACACCCTCTGACGTGGCCGCCTTaGGTCTCGTGGTGCCGCTCCCTTTGGGGCGTCCCC +
Preference number: 6 (lower is better)
Translates to: PFSPAHPLTWPP*VSWCRSLWGVP
Trigger: GGGGACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGGTGAAAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000407218.5
ENST00000453960.7
ENST00000628176.2
CDS CCA 72 bp AGCCCAGAGATGGGGGTGAGAGCTCAGGAGCCCTTGTaGCGCACTCTCCCGACGGGAGGCGAAGTGCGCACG +
Preference number: 6 (lower is better)
Translates to: SPEMGVRAQEPL*RTLPTGGEVRT
Trigger: CGTGCGCACTTCGCCTCCCGTCGGGAGAGTGCGCCACAAGGGCTCCTGAGCTCTCACCCCCATCTCTGGGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS TCA 72 bp GGCAGGGATGCAGGGAGCTGGTCTAGGTGCCATCCCTaGAGGGCATGGGCACCGGGACAGCGAAAGGGCGAG +
Preference number: 6 (lower is better)
Translates to: GRDAGSWSRCHP*RAWAPGQRKGE
Trigger: CTCGCCCTTTCGCTGTCCCGGTGCCCATGCCCTTCAGGGATGGCACCTAGACCAGCTCCCTGCATCCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS GCA 72 bp CTTCCCTTAGAGCCTCTGGCGCCGAAGAGCCTCGGGTaGTGCTGGACGCACAGTCCCCTACCCACGGCTCCT +
Preference number: 6 (lower is better)
Translates to: LPLEPLAPKSLG*CWTHSPLPTAP
Trigger: AGGAGCCGTGGGTAGGGGACTGTGCGTCCAGCAGCACCCGAGGCTCTTCGGCGCCAGAGGCTCTAAGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496908.5
CDS CAA 72 bp ACCCTTTTCACCTGCACACCCTCTGACGTGGCCGCCTaGGGTCTCGTGGTGCCGCTCCCTTTGGGGCGTCCC +
Preference number: 6 (lower is better)
Translates to: TLFTCTPSDVAA*GLVVPLPLGRP
Trigger: GGGACGCCCCAAAGGGAGCGGCACCACGAGACCCAAGGCGGCCACGTCAGAGGGTGTGCAGGTGAAAAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000407218.5
ENST00000453960.7
ENST00000628176.2
CDS CAA 72 bp CAAAGCCCAGAGATGGGGGTGAGAGCTCAGGAGCCCTaGTGGCGCACTCTCCCGACGGGAGGCGAAGTGCGC +
Preference number: 6 (lower is better)
Translates to: QSPEMGVRAQEP*WRTLPTGGEVR
Trigger: GCGCACTTCGCCTCCCGTCGGGAGAGTGCGCCACAAGGGCTCCTGAGCTCTCACCCCCATCTCTGGGCTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 72 bp GGCCACTGGCACTGTGGCCTAGGAGCTCGTCTTTCCTaGAGCCCCAATGCCAGGAGACACGGCTCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: GHWHCGLGARLS*SPNARRHGSPA
Trigger: GGCAGGAGAGCCGTGTCTCCTGGCATTGGGGCTGCAGGAAAGACGAGCTCCTAGGCCACAGTGCCAGTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS GCA 72 bp AGCCAGTCCAAACAGCCAGCACTGCCTGTGCGACCCTaGAAGGCAGCAGCACTGGCCACTGGCACTGTGGCC +
Preference number: 6 (lower is better)
Translates to: SQSKQPALPVRP*KAAALATGTVA
Trigger: GGCCACAGTGCCAGTGGCCAGTGCTGCTGCCTTGCAGGGTCGCACAGGCAGTGCTGGCTGTTTGGACTGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS CCA 72 bp CAGCACTGCCTGTGCGACCCTGCAAGGCAGCAGCACTaGCCACTGGCACTGTGGCCTAGGAGCTCGTCTTTC +
Preference number: 6 (lower is better)
Translates to: QHCLCDPARQQH*PLALWPRSSSF
Trigger: GAAAGACGAGCTCCTAGGCCACAGTGCCAGTGGCCAGTGCTGCTGCCTTGCAGGGTCGCACAGGCAGTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS CCA 72 bp GGATGCAGCCGTTCCCTGAAGAGAGGCCTAGGCAGCTaGGAGACCAGGGCAGCAGGGACACTCAGACCTTGC +
Preference number: 6 (lower is better)
Translates to: GCSRSLKRGLGS*ETRAAGTLRPC
Trigger: GCAAGGTCTGAGTGTCCCTGCTGCCCTGGTCTCCCAGCTGCCTAGGCCTCTCTTCAGGGAACGGCTGCATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS CAA 90 bp CCGCTCCCTTTGGGGCGTCCCCGGCCTCTGCCAGTTCCTGGAGCTTaGGGAGATTTGGGCTTCTTAGGTGGTTTCTGCTCTCGCCGGGAG +
Preference number: 6 (lower is better)
Translates to: PLPLGRPRPLPVPGA*GDLGFLGGFCSRRE
Trigger: CTCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCCCCAAAGGGAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS CAA 90 bp TCCCTCGCTCAGTCACCAGGGTGCTGTCCTGGAAATGGCGTGACCTaGGGTGAGGAGGCTCTTGCAGCTGAGGCTAACCGGAGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: SLAQSPGCCPGNGVT*GEEALAAEANRSVR
Trigger: GCGGACACTCCGGTTAGCCTCAGCTGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463644.5
CDS CAA 90 bp AGCCTCGCTCAGTCACCAGGGTGCTGTCCTGGAAATGGCGTGACCTaGGGTGAGGAGGCTCTTGCAGCTGAGGCTAACCGGAGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: SLAQSPGCCPGNGVT*GEEALAAEANRSVR
Trigger: GCGGACACTCCGGTTAGCCTCAGCTGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460227.4
CDS CAA 90 bp GTGCTCGCTCAGTCACCAGGGTGCTGTCCTGGAAATGGCGTGACCTaGGGTGAGGAGGCTCTTGCAGCTGAGGCTAACCGGAGTGTCCGC +
Preference number: 6 (lower is better)
Translates to: VLAQSPGCCPGNGVT*GEEALAAEANRSVR
Trigger: GCGGACACTCCGGTTAGCCTCAGCTGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488293.4
CDS GCA 72 bp CGCAGGGCATCCAGAGAGGAGAGTGACCTCCGGGTCTaGCACGTGAGACTACTGCAGAGTCTAGGCAGGGAT +
Preference number: 6 (lower is better)
Translates to: RRASREESDLRV*HVRLLQSLGRD
Trigger: ATCCCTGCCTAGACTCTGCAGTAGTCTCACGTGGCAGACCCGGAGGTCACTCTCCTCTCTGGATGCCCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS GCA 72 bp GGAGAGGCTAGCTCAGTGCTCGCTCAGTCACCAGGGTaGTGTCCTGGAAATGGCGTGACCTTGGGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: GEASSVLAQSPG*CPGNGVTLGEE
Trigger: CTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGCACTGAGCTAGCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488293.4
CDS CAA 72 bp CAGTCACCAGGGTGCTGTCCTGGAAATGGCGTGACCTaGGGTGAGGAGGCTCTTGCAGCTGAGGCTAACCGG +
Preference number: 6 (lower is better)
Translates to: QSPGCCPGNGVT*GEEALAAEANR
Trigger: CCGGTTAGCCTCAGCTGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS TCA 72 bp TCGCTCAGTCACCAGGGTGCTGTCCTGGAAATGGCGTaGCCTTGGGTGAGGAGGCTCTTGCAGCTGAGGCTA +
Preference number: 6 (lower is better)
Translates to: SLSHQGAVLEMA*PWVRRLLQLRL
Trigger: TAGCCTCAGCTGCAAGAGCCTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS TCA 72 bp CTCACATTCCGAGGCCACAGCACTCCAAAGAACCTCTaGGCACCCTGGGGACACGCTCGCACCTTAGAGCCT +
Preference number: 6 (lower is better)
Translates to: LTFRGHSTPKNL*APWGHARTLEP
Trigger: AGGCTCTAAGGTGCGAGCGTGTCCCCAGGGTGCTCAGAGGTTCTTTGGAGTGCTGTGGCCTCGGAATGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 72 bp GTGCCATTGCATTCCAGCCTCGCTCAGTCACCAGGGTaGTGTCCTGGAAATGGCGTGACCTTGGGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: VPLHSSLAQSPG*CPGNGVTLGEE
Trigger: CTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGGCTGGAATGCAATGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460227.4
CDS CCA 72 bp AGTTCCTGGAGCTTTGGGAGATTTGGGCTTCTTAGGTaGTTTCTGCTCTCGCCGGGAGGGGCTCCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: SSWSFGRFGLLR*FLLSPGGAPSP
Trigger: GGGAGAGGGAGCCCCTCCCGGCGAGAGCAGAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303391.11
ENST00000453960.7
ENST00000486506.5
CDS CCA 72 bp GAAGCAGCTCCTTCTCTACACATCACTTTGGCCCGGTaGGGTCTCGTCAGAAATGGCCACCGTGAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: EAAPSLHITLAR*GLVRNGHREAP
Trigger: TGGGGCCTCACGGTGGCCATTTCTGACGAGACCCCACCGGGCCAAAGTGATGTGTAGAGAAGGAGCTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626422.2
ENST00000676382.1
CDS CAA 72 bp GGCACAATTAACAGGAGCCACAGCGTCGCGATGAACTaGCCCCATCTGGTACCGGTGATCCCGAGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: GTINRSHSVAMN*PHLVPVIPSAP
Trigger: TGGAGCGCTCGGGATCACCGGTACCAGATGGGGCAAGTTCATCGCGACGCTGTGGCTCCTGTTAATTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CAA 90 bp CTAGTCACCGCCTTGCGGCTGGTCTACCCCAAGAGACTTCCCCTCTaGTCTACACTGCACAGACTGTGCAATGAGGGCACCATGGCACTC +
Preference number: 6 (lower is better)
Translates to: LVTALRLVYPKRLPL*STLHRLCNEGTMAL
Trigger: GAGTGCCATGGTGCCCTCATTGCACAGTCTGTGCAGTGTAGACAAGAGGGGAAGTCTCTTGGGGTAGACCAGCCGCAAGGCGGTGACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626422.2
CDS TCA 72 bp CATCTGGTACCGGTGATCCCGAGCGCTCCAGGGCGATaGGAGCCCGTTACCTACTATGTCCCACTCCACTTA +
Preference number: 6 (lower is better)
Translates to: HLVPVIPSAPGR*EPVTYYVPLHL
Trigger: TAAGTGGAGTGGGACATAGTAGGTAACGGGCTCTCATCGCCCTGGAGCGCTCGGGATCACCGGTACCAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 72 bp ACTGAGGAGGGCCTCAGTGCCCCAGGGACAGTAGCATaGAGGATGGTTACGCCAGAGGATGGATCGACTTCT +
Preference number: 6 (lower is better)
Translates to: TEEGLSAPGTVA*RMVTPEDGSTS
Trigger: AGAAGTCGATCCATCCTCTGGCGTAACCATCCTCCATGCTACTGTCCCTGGGGCACTGAGGCCCTCCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481807.3
CDS CAA 72 bp TTGGGGCGTCCCCGGCCTCTGCCAGTTCCTGGAGCTTaGGGAGATTTGGGCTTCTTAGGTGGTTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: LGRPRPLPVPGA*GDLGFLGGFCS
Trigger: AGAGCAGAAACCACCTAAGAAGCCCAAATCTCCCAAAGCTCCAGGAACTGGCAGAGGCCGGGGACGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303391.11
ENST00000453960.7
CDS CAA 72 bp CTGGTGACCGAAGCAGCTCCTTCTCTACACATCACTTaGGCCCGGTGGGGTCTCGTCAGAAATGGCCACCGT +
Preference number: 6 (lower is better)
Translates to: LVTEAAPSLHIT*ARWGLVRNGHR
Trigger: ACGGTGGCCATTTCTGACGAGACCCCACCGGGCCAAAGTGATGTGTAGAGAAGGAGCTGCTTCGGTCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626422.2
ENST00000676382.1
CDS CAA 90 bp GGCTTCACCACTTCCTTGACCTCGATGCTGACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGTACGGTCTCCTTTTCGAAGTACGCA +
Preference number: 6 (lower is better)
Translates to: GFTTSLTSMLTVSRV*RFLMGSTVSFSKYA
Trigger: TGCGTACTTCGAAAAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAGGAAGTGGTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637917.1
CDS TCA 72 bp ACCACAACACGGACGCAGCGCTCCACGTGCTTCTTCTaGTGGCTGGAGACCTTCGACCGTAAGCTTCTAGCA +
Preference number: 6 (lower is better)
Translates to: TTTRTQRSTCFF*WLETFDRKLLA
Trigger: TGCTAGAAGCTTACGGTCGAAGGTCTCCAGCCATCAGAAGAAGCACGTGGAGCGCTGCGTCCGTGTTGTGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000481807.3
ENST00000488293.4
CDS TCA 72 bp TGGGGTACTGATCCCGCACAGCAGAGACACAACGTGTaGAAGGCTCGGCAGAGCCCATTCCTGTTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: WGTDPAQQRHNV*KARQSPFLFLE
Trigger: TTCCAGGAACAGGAATGGGCTCTGCCGAGCCTTTCACACGTTGTGTCTCTGCTGTGCGGGATCAGTACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 72 bp CCCAAAGGAGTAGTAACCAAGGCCCTGAAGCCTGCCTaGGAGCTGAGGTGGGCAGTATCAGCCTCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: PKGVVTKALKPA*ELRWAVSASSQ
Trigger: TTGAGAAGAGGCTGATACTGCCCACCTCAGCTCCCAGGCAGGCTTCAGGGCCTTGGTTACTACTCCTTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS CCA 72 bp GTGGATAATAATCCCCACCTACTTGTTCCTGCTAGATaGGGAAAGGAGCCGGTGGACCTACTCGCTCGCGGG +
Preference number: 6 (lower is better)
Translates to: VDNNPHLLVPAR*GKEPVDLLARG
Trigger: CCCGCGAGCGAGTAGGTCCACCGGCTCCTTTCCCCATCTAGCAGGAACAAGTAGGTGGGGATTATTATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CAA 72 bp AGCTGCTTCTCCCTCCTGGGTCCTGGAACGACAGGCTaGAGAACAGATCTGAGCCCTAACATCCCAGCTACC +
Preference number: 6 (lower is better)
Translates to: SCFSLLGPGTTG*RTDLSPNIPAT
Trigger: GGTAGCTGGGATGTTAGGGCTCAGATCTGTTCTCAAGCCTGTCGTTCCAGGACCCAGGAGGGAGAAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611468.2
CDS CAA 72 bp TGTCCCATGTGGTTCACATCAGTGCTAGTCACCGCCTaGCGGCTGGTCTACCCCAAGAGACTTCCCCTCTTG +
Preference number: 6 (lower is better)
Translates to: CPMWFTSVLVTA*RLVYPKRLPLL
Trigger: CAAGAGGGGAAGTCTCTTGGGGTAGACCAGCCGCAAGGCGGTGACTAGCACTGATGTGAACCACATGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626422.2
CDS CAA 72 bp ACCTCGATGCTGACCGTCTCCCGGGTCTTGCGCTTCTaGATGGGGAGTACGGTCTCCTTTTCGAAGTACGCA +
Preference number: 6 (lower is better)
Translates to: TSMLTVSRVLRF*MGSTVSFSKYA
Trigger: TGCGTACTTCGAAAAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637917.1
CDS CAA 72 bp ACTTCCTTGACCTCGATGCTGACCGTCTCCCGGGTCTaGCGCTTCTTGATGGGGAGTACGGTCTCCTTTTCG +
Preference number: 6 (lower is better)
Translates to: TSLTSMLTVSRV*RFLMGSTVSFS
Trigger: CGAAAAGGAGACCGTACTCCCCATCAAGAAGCGCAAGACCCGGGAGACGGTCAGCATCGAGGTCAAGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637917.1
CDS TCA 72 bp GTTCAGGGGAGAGGTCTGAAGAGCCAGGCGAGTGCGTaGGGGCGTGCTGAATATAAGTGTAAACAACCCTCC +
Preference number: 6 (lower is better)
Translates to: VQGRGLKSQASA*GRAEYKCKQPS
Trigger: GGAGGGTTGTTTACACTTATATTCAGCACGCCCTCACGCACTCGCCTGGCTCTTCAGACCTCTCCCCTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS GCA 72 bp TCTTCTGACTTTTCTTCCCTCGCTCAGTCACCAGGGTaGTGTCCTGGAAATGGCGTGACCTTGGGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: SSDFSSLAQSPG*CPGNGVTLGEE
Trigger: CTCCTCACCCAAGGTCACGCCATTTCCAGGACAGCACCCTGGTGACTGAGCGAGGGAAGAAAAGTCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463644.5
CDS CCA 72 bp AGAAATGGAAGACACCCACTGAGGGGCCCTGGGTCCTaGATCCTTACAAAGCCACTGCAGTGGTCATGGACA +
Preference number: 6 (lower is better)
Translates to: RNGRHPLRGPGS*ILTKPLQWSWT
Trigger: TGTCCATGACCACTGCAGTGGCTTTGTAAGGATCCAGGACCCAGGGCCCCTCAGTGGGTGTCTTCCATTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS CCA 72 bp CCCGTTACCTACTATGTCCCACTCCACTTATGTAACTaGAAGATCGCCGGCGAAGGGGAGGGTAGGATGGGA +
Preference number: 6 (lower is better)
Translates to: PVTYYVPLHLCN*KIAGEGEGRMG
Trigger: TCCCATCCTACCCTCCCCTTCGCCGGCGATCTTCCAGTTACATAAGTGGAGTGGGACATAGTAGGTAACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 72 bp GGCTGGTATGGAAGCCCAGTGGAGCCATTAGGACAATaGAAAAGGAGGTACCCCTCCACCAGGCACTTTGCA +
Preference number: 6 (lower is better)
Translates to: GWYGSPVEPLGQ*KRRYPSTRHFA
Trigger: TGCAAAGTGCCTGGTGGAGGGGTACCTCCTTTTCCATTGTCCTAATGGCTCCACTGGGCTTCCATACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CAA 72 bp AGCTGCTTCTCCCTCCTGGGTCCTGGAACGACAGGCTaGAGAACAGATCTGAATCCCATCTTGCAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: SCFSLLGPGTTG*RTDLNPILQLS
Trigger: GCTCAGCTGCAAGATGGGATTCAGATCTGTTCTCAAGCCTGTCGTTCCAGGACCCAGGAGGGAGAAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369957.5
CDS CAA 72 bp AGCTGCTTCTCCCTCCTGGGTCCTGGAACGACAGGCTaGAGAACAGATCTGAATCCCATCTTGCAGCTGACC +
Preference number: 6 (lower is better)
Translates to: SCFSLLGPGTTG*RTDLNPILQLT
Trigger: GGTCAGCTGCAAGATGGGATTCAGATCTGTTCTCAAGCCTGTCGTTCCAGGACCCAGGAGGGAGAAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS TCA 72 bp GCTACAGAGGTTGCAAAAGACGTCTGCAAGGGTCAGTaGGGGCCCAAAGGAGTAGTAACCAAGGCCCTGAAG +
Preference number: 6 (lower is better)
Translates to: ATEVAKDVCKGQ*GPKGVVTKALK
Trigger: CTTCAGGGCCTTGGTTACTACTCCTTTGGGCCCTCACTGACCCTTGCAGACGTCTTTTGCAACCTCTGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS GCA 72 bp TGGTCTACCCCAAGAGACTTCCCCTCTTGTCTACACTaGACAGACTGTGCAATGAGGGCACCATGGCACTCA +
Preference number: 6 (lower is better)
Translates to: WSTPRDFPSCLH*TDCAMRAPWHS
Trigger: TGAGTGCCATGGTGCCCTCATTGCACAGTCTGTGCAGTGTAGACAAGAGGGGAAGTCTCTTGGGGTAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626422.2
CDS GCA 72 bp ATAGAACACCTCAAAAGACACAGACAAGACCCTGGATaGAGCCGTTCCCTGAAGAGAGGCCTAGGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: IEHLKRHRQDPG*SRSLKRGLGSW
Trigger: CCAGCTGCCTAGGCCTCTCTTCAGGGAACGGCTGCATCCAGGGTCTTGTCTGTGTCTTTTGAGGTGTTCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS CCA 72 bp TGGGACATATCAGTAGTCCGTTGGACACTGGTGGCTTaGAGATGGCGGAAGATGAGGTGGAGGAAGTCACTG +
Preference number: 6 (lower is better)
Translates to: WDISVVRWTLVA*RWRKMRWRKSL
Trigger: CAGTGACTTCCTCCACCTCATCTTCCGCCATCTCCAAGCCACCAGTGTCCAACGGACTACTGATATGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481807.3
CDS CCA 72 bp AACTTGAGGGGTTTGTCCTTGAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCCCTTAGAGCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: NLRGLSLRPWRS*SSDFSSLRASG
Trigger: GCCAGAGGCTCTAAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496908.5
CDS CCA 72 bp CCTGTATCTTCCTCCAGAAGTTTAGGGCCCAGAGTGTaGCTGCCAGAGTCACCTAGAGCCACTGCATACACA +
Preference number: 6 (lower is better)
Translates to: PVSSSRSLGPRV*LPESPRATAYT
Trigger: TGTGTATGCAGTGGCTCTAGGTGACTCTGGCAGCCACACTCTGGGCCCTAAACTTCTGGAGGAAGATACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000625300.1
ENST00000626422.2
CDS CAA 90 bp ATGATGAGTTTGGGACATATCAGTAGTCCGTTGGACACTGGTGGCTaGGAGATGGCGGAAGATGAGGTGGAGGAAGTCACTGAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: MMSLGHISSPLDTGG*EMAEDEVEEVTEEG
Trigger: GCCCTCCTCAGTGACTTCCTCCACCTCATCTTCCGCCATCTCCAAGCCACCAGTGTCCAACGGACTACTGATATGTCCCAAACTCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481807.3
CDS TCA 72 bp GTGAGGGAATGTCTTGTCCCCACCATGACTCACCCCTaGGTTCCTCCCTATCCTGTATCTTCCTCCAGAAGT +
Preference number: 6 (lower is better)
Translates to: VRECLVPTMTHP*VPPYPVSSSRS
Trigger: ACTTCTGGAGGAAGATACAGGATAGGGAGGAACTCAGGGGTGAGTCATGGTGGGGACAAGACATTCCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000625300.1
ENST00000626422.2
CDS TCA 72 bp ACCGGAGGGGCACCCGAGGAGACAAACTGCCAACTATaGAGAACAAAGCAGAGACCTCAACTTGTCACGTCT +
Preference number: 6 (lower is better)
Translates to: TGGAPEETNCQL*RTKQRPQLVTS
Trigger: AGACGTGACAAGTTGAGGTCTCTGCTTTGTTCTTCATAGTTGGCAGTTTGTCTCCTCGGGTGCCCCTCCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 72 bp TGCCAGAAAGCAGTTGTCTCTTCTGGCTACAGAGGTTaGAAAAGACGTCTGCAAGGGTCAGTGAGGGCCCAA +
Preference number: 6 (lower is better)
Translates to: CQKAVVSSGYRG*KRRLQGSVRAQ
Trigger: TTGGGCCCTCACTGACCCTTGCAGACGTCTTTTGCAACCTCTGTAGCCAGAAGAGACAACTGCTTTCTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS GCA 72 bp CCCATTCCCTTGGAGATCCAGGGGGACGCCATCAATTaGTCACTCCTTCTCCTTACACATACAGTTAGGGGT +
Preference number: 6 (lower is better)
Translates to: PIPLEIQGDAIN*SLLLLTHTVRG
Trigger: ACCCCTAACTGTATGTGTAAGGAGAAGGAGTGAGCAATTGATGGCGTCCCCCTGGATCTCCAAGGGAATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS CCA 72 bp CTGAGCCCTAACATCCCAGCTACCATGGAATCCTGTTaGAGCTGGTCTACAGAAGCAAGGTGTATTCTGGGG +
Preference number: 6 (lower is better)
Translates to: LSPNIPATMESC*SWSTEARCILG
Trigger: CCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303391.11
ENST00000369957.5
ENST00000415944.3
ENST00000611468.2
ENST00000627864.1
ENST00000628176.2
ENST00000630151.2
ENST00000637791.1
ENST00000674996.1
ENST00000675526.1
ENST00000675841.1
CDS CCA 72 bp AACTTGAGGGGTTTGTCCTTGAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCCCTGAGCCCTAACATC +
Preference number: 6 (lower is better)
Translates to: NLRGLSLRPWRS*SSDFSSLSPNI
Trigger: GATGTTAGGGCTCAGGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000415944.3
ENST00000628176.2
ENST00000630151.2
CDS CAA 72 bp TTGGGACATATCAGTAGTCCGTTGGACACTGGTGGCTaGGAGATGGCGGAAGATGAGGTGGAGGAAGTCACT +
Preference number: 6 (lower is better)
Translates to: LGHISSPLDTGG*EMAEDEVEEVT
Trigger: AGTGACTTCCTCCACCTCATCTTCCGCCATCTCCAAGCCACCAGTGTCCAACGGACTACTGATATGTCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481807.3
CDS CAA 72 bp ATGCCAGAAAGCAGTTGTCTCTTCTGGCTACAGAGGTaGCAAAAGACGTCTGCAAGGGTCAGTGAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: MPESSCLFWLQR*QKTSARVSEGP
Trigger: TGGGCCCTCACTGACCCTTGCAGACGTCTTTTGCAACCTCTGTAGCCAGAAGAGACAACTGCTTTCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS TCA 72 bp TGGTCTTCTGACTTTTCTTCCTCAACACATGCTGGATaGATAACCACAACACGGACGCAGCGCTCCACGTGC +
Preference number: 6 (lower is better)
Translates to: WSSDFSSSTHAG*ITTTRTQRSTC
Trigger: GCACGTGGAGCGCTGCGTCCGTGTTGTGGTTATTCATCCAGCATGTGTTGAGGAAGAAAAGTCAGAAGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000481807.3
ENST00000488293.4
CDS TCA 72 bp AGTCCCTTCGTTAGCAGTTCATTCTGGAAAAGAGCATaGCTACTCCCACCCTCCGTGTTCTCAGCCCCACAA +
Preference number: 6 (lower is better)
Translates to: SPFVSSSFWKRA*LLPPSVFSAPQ
Trigger: TTGTGGGGCTGAGAACACGGAGGGTGGGAGTAGTCATGCTCTTTTCCAGAATGAACTGCTAACGAAGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626422.2
CDS TCA 72 bp CTGAATTCGATCCTGTTATCTCACAGTCTGGGGTACTaGTCCCGCACAGCAGAGACACAACGTGTGAAAGGC +
Preference number: 6 (lower is better)
Translates to: LNSILLSHSLGY*SRTAETQRVKG
Trigger: GCCTTTCACACGTTGTGTCTCTGCTGTGCGGGATCAGTACCCCAGACTGTGAGATAACAGGATCGAATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 72 bp CACATCAAAGCAGGAACTGGTGAGTCTGTATTTTTATaGAGCAGTCTCTCCTCCTCGCCTCCTCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: HIKAGTGESVFL*SSLSSSPPPPP
Trigger: AGGAGGAGGAGGAGGCGAGGAGGAGAGACTGCTCCATAAAAATACAGACTCACCAGTTCCTGCTTTGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303391.11
ENST00000369957.5
ENST00000627864.1
ENST00000628176.2
CDS CCA 72 bp CCTAACATCCCAGCTACCATGGAATCCTGTTGGAGCTaGTCTACAGAAGCAAGGTGTATTCTGGGGAGTCAC +
Preference number: 6 (lower is better)
Translates to: PNIPATMESCWS*STEARCILGSH
Trigger: GTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGGATTCCATGGTAGCTGGGATGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000303391.11
ENST00000369957.5
ENST00000415944.3
ENST00000611468.2
ENST00000627864.1
ENST00000628176.2
ENST00000630151.2
ENST00000637791.1
ENST00000674996.1
ENST00000675526.1
ENST00000675841.1
CDS CCA 72 bp AACTTGAGGGGTTTGTCCTTGAGGCCCTGGAGGTCCTaGTCTTCTGACTTTTCTTCCTCAACACATGCTGGA +
Preference number: 6 (lower is better)
Translates to: NLRGLSLRPWRS*SSDFSSSTHAG
Trigger: TCCAGCATGTGTTGAGGAAGAAAAGTCAGAAGACCAGGACCTCCAGGGCCTCAAGGACAAACCCCTCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000481807.3
ENST00000488293.4
CDS CCA 72 bp TGTCTACACTGCACAGACTGTGCAATGAGGGCACCATaGCACTCACTGGCAAGCATCCTTAGGAAACCAGAA +
Preference number: 6 (lower is better)
Translates to: CLHCTDCAMRAP*HSLASILRKPE
Trigger: TTCTGGTTTCCTAAGGATGCTTGCCAGTGAGTGCCATGGTGCCCTCATTGCACAGTCTGTGCAGTGTAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626422.2
CDS CCA 72 bp CCCTCCACCAGGCACTTTGCAGAGAAAACTATACTCTaGAAGCTGCCTGCACTGTTGATAGGGCTAGACGTA +
Preference number: 6 (lower is better)
Translates to: PSTRHFAEKTIL*KLPALLIGLDV
Trigger: TACGTCTAGCCCTATCAACAGTGCAGGCAGCTTCCAGAGTATAGTTTTCTCTGCAAAGTGCCTGGTGGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CAA 90 bp GCAGAGACCTCAACTTGTCACGTCTCAAGCTCAGATGTACAAACTTaGGGATCGTCAAGTGAGGCTCGTGTGTATGCCTGGGGATATGAC +
Preference number: 6 (lower is better)
Translates to: AETSTCHVSSSDVQT*GSSSEARVYAWGYD
Trigger: GTCATATCCCCAGGCATACACACGAGCCTCACTTGACGATCCCAAAGTTTGTACATCTGAGCTTGAGACGTGACAAGTTGAGGTCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CAA 90 bp AGACCAGGGCAGCAGGGACACTCAGACCTTGCATCACTCTGGAGTTaGCACTTCCTGAATTGTGAAGCATGCACATGTCTCACTTATGCA +
Preference number: 6 (lower is better)
Translates to: RPGQQGHSDLASLWS*HFLNCEACTCLTYA
Trigger: TGCATAAGTGAGACATGTGCATGCTTCACAATTCAGGAAGTGCAAACTCCAGAGTGATGCAAGGTCTGAGTGTCCCTGCTGCCCTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS TCA 72 bp TATTCTAGTGTGGGAGGCTTCCCCGTTCTTTTCTGGTaGCCGAAGCAGCTCCTTCTCTACACATCACTTTGG +
Preference number: 6 (lower is better)
Translates to: YSSVGGFPVLFW*PKQLLLYTSLW
Trigger: CCAAAGTGATGTGTAGAGAAGGAGCTGCTTCGGTCACCAGAAAAGAACGGGGAAGCCTCCCACACTAGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000626422.2
ENST00000676382.1
CDS CCA 72 bp CCTGTTGGAGCTGGTCTACAGAAGCAAGGTGTATTCTaGGGAGTCACATGTCACATCAAAGCAGGAACTGGT +
Preference number: 6 (lower is better)
Translates to: PVGAGLQKQGVF*GVTCHIKAGTG
Trigger: ACCAGTTCCTGCTTTGATGTGACATGTGACTCCCCAGAATACACCTTGCTTCTGTAGACCAGCTCCAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000303391.11
ENST00000369957.5
ENST00000415944.3
ENST00000611468.2
ENST00000627864.1
ENST00000628176.2
ENST00000630151.2
ENST00000674996.1
ENST00000675526.1
ENST00000675841.1
CDS CCA 72 bp GGAAAGAGCAACATGCCAGAAAGCAGTTGTCTCTTCTaGCTACAGAGGTTGCAAAAGACGTCTGCAAGGGTC +
Preference number: 6 (lower is better)
Translates to: GKSNMPESSCLF*LQRLQKTSARV
Trigger: GACCCTTGCAGACGTCTTTTGCAACCTCTGTAGCCAGAAGAGACAACTGCTTTCTGGCATGTTGCTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS CCA 72 bp AATGAGCAGGCTAAGCCTCCTGGTGAACCTGGACATTaGGCACAAGTAACAGGCACATTTAGACACCAACGA +
Preference number: 6 (lower is better)
Translates to: NEQAKPPGEPGH*AQVTGTFRHQR
Trigger: TCGTTGGTGTCTAAATGTGCCTGTTACTTGTGCCCAATGTCCAGGTTCACCAGGAGGCTTAGCCTGCTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS CCA 72 bp ACTTTGGGATCGTCAAGTGAGGCTCGTGTGTATGCCTaGGGATATGACTGTATTCCAGTGATCAGCCACCTA +
Preference number: 6 (lower is better)
Translates to: TLGSSSEARVYA*GYDCIPVISHL
Trigger: TAGGTGGCTGATCACTGGAATACAGTCATATCCCCAGGCATACACACGAGCCTCACTTGACGATCCCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 72 bp CAACTTGTCACGTCTCAAGCTCAGATGTACAAACTTTaGGATCGTCAAGTGAGGCTCGTGTGTATGCCTGGG +
Preference number: 6 (lower is better)
Translates to: QLVTSQAQMYKL*DRQVRLVCMPG
Trigger: CCCAGGCATACACACGAGCCTCACTTGACGATCCCAAAGTTTGTACATCTGAGCTTGAGACGTGACAAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CAA 72 bp GAGTCACAGGATCAGGAGCAGAATCAAATTTGGGACTaGAGGCAGTGTGATGCTCTTCTGGTCTTCCGCTTC +
Preference number: 6 (lower is better)
Translates to: ESQDQEQNQIWD*RQCDALLVFRF
Trigger: GAAGCGGAAGACCAGAAGAGCATCACACTGCCTCAAGTCCCAAATTTGATTCTGCTCCTGATCCTGTGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS TCA 72 bp CAAGTAGGTATGGTTCCTGGATCACCAACCAACCCCTaGATTCGATCCTGTTATCTCACAGTCTGGGGTACT +
Preference number: 6 (lower is better)
Translates to: QVGMVPGSPTNP*IRSCYLTVWGT
Trigger: AGTACCCCAGACTGTGAGATAACAGGATCGAATTCAGGGGTTGGTTGGTGATCCAGGAACCATACCTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS TCA 72 bp TTAAACAGCACAGAAGTCGGAGTTCGGCTGACTGCATaGCACTCTCCTATCAATCGGGTGAAACAAAGACCC +
Preference number: 6 (lower is better)
Translates to: LNSTEVGVRLTA*HSPINRVKQRP
Trigger: GGGTCTTTGTTTCACCCGATTGATAGGAGAGTGTCATGCAGTCAGCCGAACTCCGACTTCTGTGCTGTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CCA 72 bp TCCCTAGAGGGTTGGAGGAACAGGTTTGAGTCCAGTTaGCTAGGAACAATACTTCAAATCCTTCTGCCAAGC +
Preference number: 6 (lower is better)
Translates to: SLEGWRNRFESS*LGTILQILLPS
Trigger: GCTTGGCAGAAGGATTTGAAGTATTGTTCCTAGCCAACTGGACTCAAACCTGTTCCTCCAACCCTCTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS CAA 72 bp TCAACTTGTCACGTCTCAAGCTCAGATGTACAAACTTaGGGATCGTCAAGTGAGGCTCGTGTGTATGCCTGG +
Preference number: 6 (lower is better)
Translates to: STCHVSSSDVQT*GSSSEARVYAW
Trigger: CCAGGCATACACACGAGCCTCACTTGACGATCCCAAAGTTTGTACATCTGAGCTTGAGACGTGACAAGTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CAA 90 bp AAGCTCATAAAGCCATTAGGGAAAGAGCAACATGCCAGAAAGCAGTaGTCTCTTCTGGCTACAGAGGTTGCAAAAGACGTCTGCAAGGGT +
Preference number: 6 (lower is better)
Translates to: KLIKPLGKEQHARKQ*SLLATEVAKDVCKG
Trigger: ACCCTTGCAGACGTCTTTTGCAACCTCTGTAGCCAGAAGAGACAACTGCTTTCTGGCATGTTGCTCTTTCCCTAATGGCTTTATGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS TCA 72 bp GCCAGTGCTAACAAGAAAGCCACAGATGGGTTTCTTTaGGCTGTTAAGACACTGGAAAGGGCTGGTATGGAA +
Preference number: 6 (lower is better)
Translates to: ASANKKATDGFL*AVKTLERAGME
Trigger: TTCCATACCAGCCCTTTCCAGTGTCTTAACAGCTCAAAGAAACCCATCTGTGGCTTTCTTGTTAGCACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 72 bp AACTGTTTGCATTCAAGTCTAGACTTGCCCAGACCCTaGACACTGCATCAAGGTCCTGAGTTTCAAGCAACA +
Preference number: 6 (lower is better)
Translates to: NCLHSSLDLPRP*TLHQGPEFQAT
Trigger: TGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGTCTAGACTTGAATGCAAACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS GCA 72 bp GGATTTAAACAGCACAGAAGTCGGAGTTCGGCTGACTaGATGACACTCTCCTATCAATCGGGTGAAACAAAG +
Preference number: 6 (lower is better)
Translates to: GFKQHRSRSSAD*MTLSYQSGETK
Trigger: CTTTGTTTCACCCGATTGATAGGAGAGTGTCATGCAGTCAGCCGAACTCCGACTTCTGTGCTGTTTAAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 72 bp CTGTTTGCATTCAAGTCTTGCCCAGACCCTGCACACTaGATCAAGGTCCTGAGTTTCAAGCAACAGAAATCA +
Preference number: 6 (lower is better)
Translates to: LFAFKSCPDPAH*IKVLSFKQQKS
Trigger: TGATTTCTGTTGCTTGAAACTCAGGACCTTGATGCAGTGTGCAGGGTCTGGGCAAGACTTGAATGCAAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS CAA 72 bp AAACAAATGATGAGTTTGGGACATATCAGTAGTCCGTaGGACACTGGTGGCTTGGAGATGGCGGAAGATGAG +
Preference number: 6 (lower is better)
Translates to: KQMMSLGHISSP*DTGGLEMAEDE
Trigger: CTCATCTTCCGCCATCTCCAAGCCACCAGTGTCCAACGGACTACTGATATGTCCCAAACTCATCATTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481807.3
CDS CAA 90 bp GGTGCTATACTATACAGGGGAAGGCGTGAGGAAGTCACACATGCTTaGGTGTTCAAGAAGCTCATAAAGCCATTAGGGAAAGAGCAACAT +
Preference number: 6 (lower is better)
Translates to: GAILYRGRREEVTHA*VFKKLIKPLGKEQH
Trigger: ATGTTGCTCTTTCCCTAATGGCTTTATGAGCTTCTTGAACACCAAAGCATGTGTGACTTCCTCACGCCTTCCCCTGTATAGTATAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS TCA 72 bp TCACTGGCAAGCATCCTTAGGAAACCAGAACTCAAATaGTGTAGGGAAGTTACCAAAGGCTGCTTAGTGCTG +
Preference number: 6 (lower is better)
Translates to: SLASILRKPELK*CREVTKGCLVL
Trigger: CAGCACTAAGCAGCCTTTGGTAACTTCCCTACATCATTTGAGTTCTGGTTTCCTAAGGATGCTTGCCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626422.2
CDS GCA 72 bp GGGTCCATACTTAGCAATGTCATAAACGGTCTCCCCTaGGACAGCAATCCTTTTACACTCTTCATAATGACC +
Preference number: 6 (lower is better)
Translates to: GSILSNVINGLP*DSNPFTLFIMT
Trigger: GGTCATTATGAAGAGTGTAAAAGGATTGCTGTCGCAGGGGAGACCGTTTATGACATTGCTAAGTATGGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS GCA 72 bp GCACTTTGCAGAGAAAACTATACTCTGGAAGCTGCCTaGACTGTTGATAGGGCTAGACGTATGATAAACAGC +
Preference number: 6 (lower is better)
Translates to: ALCRENYTLEAA*TVDRARRMINS
Trigger: GCTGTTTATCATACGTCTAGCCCTATCAACAGTGCAGGCAGCTTCCAGAGTATAGTTTTCTCTGCAAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS CAA 90 bp AGGAGACAAACTGCCAACTATGAAGAACAAAGCAGAGACCTCAACTaGTCACGTCTCAAGCTCAGATGTACAAACTTTGGGATCGTCAAG +
Preference number: 6 (lower is better)
Translates to: RRQTANYEEQSRDLN*SRLKLRCTNFGIVK
Trigger: CTTGACGATCCCAAAGTTTGTACATCTGAGCTTGAGACGTGACAAGTTGAGGTCTCTGCTTTGTTCTTCATAGTTGGCAGTTTGTCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS TCA 72 bp GATAAGAGAATCCCTAGAGGGTTGGAGGAACAGGTTTaGGTCCAGTTGGCTAGGAACAATACTTCAAATCCT +
Preference number: 6 (lower is better)
Translates to: DKRIPRGLEEQV*VQLARNNTSNP
Trigger: AGGATTTGAAGTATTGTTCCTAGCCAACTGGACTCAAACCTGTTCCTCCAACCCTCTAGGGATTCTCTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460227.4
ENST00000463644.5
ENST00000488293.4
CDS TCA 72 bp CCTTGCATCACTCTGGAGTTTGCACTTCCTGAATTGTaGAGCATGCACATGTCTCACTTATGCAACAGTGAA +
Preference number: 6 (lower is better)
Translates to: PCITLEFALPEL*SMHMSHLCNSE
Trigger: TTCACTGTTGCATAAGTGAGACATGTGCATGCTTCACAATTCAGGAAGTGCAAACTCCAGAGTGATGCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS TCA 72 bp ACTCAGACCTTGCATCACTCTGGAGTTTGCACTTCCTaGATTGTGAAGCATGCACATGTCTCACTTATGCAA +
Preference number: 6 (lower is better)
Translates to: TQTLHHSGVCTS*IVKHAHVSLMQ
Trigger: TTGCATAAGTGAGACATGTGCATGCTTCACAATTCAGGAAGTGCAAACTCCAGAGTGATGCAAGGTCTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675841.1
CDS GCA 72 bp TCCGCCCCCGCCAAAGTAACTCAATCTCCACATATTTaGCTTTATATGTACCTTCTAACTCATGACTATGGC +
Preference number: 6 (lower is better)
Translates to: SAPAKVTQSPHI*LYMYLLTHDYG
Trigger: GCCATAGTCATGAGTTAGAAGGTACATATAAAGGCAAATATGTGGAGATTGAGTTACTTTGGCGGGGGCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS GCA 72 bp TCCTTCCACACCTTCTATTCTCCTTCAGCCAAACCTTaGCCTCACATAATCCCTAAGCAGGCTATTTCTTAT +
Preference number: 6 (lower is better)
Translates to: SFHTFYSPSAKP*PHIIPKQAISY
Trigger: ATAAGAAATAGCCTGCTTAGGGATTATGTGAGGGCAAGGTTTGGCTGAAGGAGAATAGAAGGTGTGGAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS CAA 72 bp AGAGCACACCCCACAGCAGTAAAAGAGAATGACAATTaGAGTCACAGGATCAGGAGCAGAATCAAATTTGGG +
Preference number: 6 (lower is better)
Translates to: RAHPTAVKENDN*SHRIRSRIKFG
Trigger: CCCAAATTTGATTCTGCTCCTGATCCTGTGACTCAAATTGTCATTCTCTTTTACTGCTGTGGGGTGTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS CAA 72 bp ACTGCCAACTATGAAGAACAAAGCAGAGACCTCAACTaGTCACGTCTCAAGCTCAGATGTACAAACTTTGGG +
Preference number: 6 (lower is better)
Translates to: TANYEEQSRDLN*SRLKLRCTNFG
Trigger: CCCAAAGTTTGTACATCTGAGCTTGAGACGTGACAAGTTGAGGTCTCTGCTTTGTTCTTCATAGTTGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629277.1
CDS TCA 72 bp CCATGTGTGAGAAATAATAATTGCTGTTATAGCTACTaGGCTGCTGGTGCTGTTTGTTCCCTAGGACAAGAT +
Preference number: 6 (lower is better)
Translates to: PCVRNNNCCYSY*AAGAVCSLGQD
Trigger: ATCTTGTCCTAGGGAACAAACAGCACCAGCAGCTCAGTAGCTATAACAGCAATTATTATTTCTCACACATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS TCA 72 bp TTCACTGCCCATATTACATTTAGTCCACACAATTTCTaGGACAAAGCACAAAGCACTAGCCATACAACTCCC +
Preference number: 6 (lower is better)
Translates to: FTAHITFSPHNF*DKAQSTSHTTP
Trigger: GGGAGTTGTATGGCTAGTGCTTTGTGCTTTGTCTCAGAAATTGTGTGGACTAAATGTAATATGGGCAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000627864.1
CDS CCA 72 bp GGCCATTCTCATGGGTACTTTAAGCAGTACATCTGTTaGCAAAACACAAATGTTGTTACACAAATACTAAGC +
Preference number: 6 (lower is better)
Translates to: GHSHGYFKQYIC*QNTNVVTQILS
Trigger: GCTTAGTATTTGTGTAACAACATTTGTGTTTTGCCAACAGATGTACTGCTTAAAGTACCCATGAGAATGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5
CDS CCA 72 bp TTTAAAATTCATTTCTCTTGTTTCGCAAAGCTGCACTaGGAAACTGTGCTGTTAAATTCTACACTCATAAAG +
Preference number: 6 (lower is better)
Translates to: FKIHFSCFAKLH*ETVLLNSTLIK
Trigger: CTTTATGAGTGTAGAATTTAACAGCACAGTTTCCCAGTGCAGCTTTGCGAAACAAGAGAAATGAATTTTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486506.5