RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MEAK7 (Homo sapiens)

Ensembl gene IDs: ENSG00000140950

Ensembl transcript IDs: ENST00000343629.11, ENST00000561807.5, ENST00000562447.5, ENST00000565079.5, ENST00000565701.1, ENST00000565765.1, ENST00000566995.5, ENST00000567321.1, ENST00000570036.5

Found 544 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTaGCGCGAATGCCCACTGATCTCCAGCAGGGCCTGGGCCTCAGGG +
Preference number: 1 (lower is better)
Translates to: AAPHSSSGTSRSPSL*RECPLISSRAWASG
Trigger: CCCTGAGGCCCAGGCCCTGCTGGAGATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 90 bp CATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTGGCGCGAATaGCCACTGATCTCCAGCAGGGCCTGGGCCTCAGGGTCCGCATCC +
Preference number: 1 (lower is better)
Translates to: HSSSGTSRSPSLWRE*PLISSRAWASGSAS
Trigger: GGATGCGGACCCTGAGGCCCAGGCCCTGCTGGAGATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 90 bp AGCCCTTCGCTGTGGCGCGAATGCCCACTGATCTCCAGCAGGGCCTaGGCCTCAGGGTCCGCATCCAGGATGCTCTTGTTGCCCTTGGCC +
Preference number: 1 (lower is better)
Translates to: SPSLWRECPLISSRA*ASGSASRMLLLPLA
Trigger: GGCCAAGGGCAACAAGAGCATCCTGGATGCGGACCCTGAGGCCCAGGCCCTGCTGGAGATCAGTGGGCATTCGCGCCACAGCGAAGGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 90 bp AGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTaGCTCCAGGAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGAC +
Preference number: 1 (lower is better)
Translates to: RGAAGVALYPEESRS*LQEGSGGSSFIVRD
Trigger: GTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 90 bp CCCAGAAGTCTCTTGCCATCTTGCAGCTTCATGTCAGAGAGCAGCTaGGCAGCCAGCACCTGCACCCGGGGGTTGGGCCCTGGGGCTTCC +
Preference number: 1 (lower is better)
Translates to: PRSLLPSCSFMSESS*AASTCTRGLGPGAS
Trigger: GGAAGCCCCAGGGCCCAACCCCCGGGTGCAGGTGCTGGCTGCTCAGCTGCTCTCTGACATGAAGCTGCAAGATGGCAAGAGACTTCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 90 bp GAGTCCAGGAGGGCAGACCCATCACCGCGTCTGTCTCCCCATCTCTaGGAGGGCAGTCAGGAGGGACGTGGTTCAAGAGACACACGAGGC +
Preference number: 1 (lower is better)
Translates to: ESRRADPSPRLSPHL*EGSQEGRGSRDTRG
Trigger: GCCTCGTGTGTCTCTTGAACCACGTCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAGACGCGGTGATGGGTCTGCCCTCCTGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR TCA 90 bp GCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGTaGTGTGGCCACAGAGCTGGGAGAAGCTGTGTCCATGGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: ACHGPRGQPHRVPGE*CGHRAGRSCVHGAQ
Trigger: CTGAGCTCCATGGACACAGCTTCTCCCAGCTCTGTGGCCACATCACTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 90 bp CCGACGTGGTTACATTCTAGAGGCAACGGTGCACCTGACACGTCATaGTTCCTGGACCGACGAGTCCAGGAGGGCAGACCCATCACCGCG +
Preference number: 1 (lower is better)
Translates to: PTWLHSRGNGAPDTS*FLDRRVQEGRPITA
Trigger: CGCGGTGATGGGTCTGCCCTCCTGGACTCGTCGGTCCAGGAACCATGACGTGTCAGGTGCACCGTTGCCTCTAGAATGTAACCACGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR TCA 90 bp ACATGCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTaGGTGATGTGGCCACAGAGCTGGGAGAAGCTGTGTCCATGGAGC +
Preference number: 1 (lower is better)
Translates to: TCLSWSSRTATQGPR*VMWPQSWEKLCPWS
Trigger: GCTCCATGGACACAGCTTCTCCCAGCTCTGTGGCCACATCACTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 90 bp TGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTaGTCCCGAGGCAGCTGGGCGTTGATGTACATGACAGAGAGGACA +
Preference number: 1 (lower is better)
Translates to: CPWSSDEKSRHQRCR*SRGSWALMYMTERT
Trigger: TGTCCTCTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 90 bp AAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTaGCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGACAGAG +
Preference number: 1 (lower is better)
Translates to: KLCPWSSDEKSRHQR*RCSRGSWALMYMTE
Trigger: CTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 90 bp GACGAAAAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGAGGCAGCTaGGCGTTGATGTACATGACAGAGAGGACATCCAGGATGCTCTCA +
Preference number: 1 (lower is better)
Translates to: DEKSRHQRCRCSRGS*ALMYMTERTSRMLS
Trigger: TGAGAGCATCCTGGATGTCCTCTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 90 bp CCTGCACACGCCCTAAAAAGGTTTGAGTGTCCAGAGGCAGAACCGTaGACCAAGAGAAGCCCACAGAGAGAGCTGCATCCCCCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: PAHALKRFECPEAEP*TKRSPQRELHPPGS
Trigger: GGAGCCTGGGGGATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCTTTTTAGGGCGTGTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 90 bp CCAGCTGCAGACGGTGGAACGCTAGGCCCGAGAGCATCCATATGGTaGGACATCACGCAGTCCATAAAGACAAGAGGGAGGCAGGTGGGT +
Preference number: 1 (lower is better)
Translates to: PAADGGTLGPRASIW*DITQSIKTRGRQVG
Trigger: ACCCACCTGCCTCCCTCTTGTCTTTATGGACTGCGTGATGTCCCACCATATGGATGCTCTCGGGCCTAGCGTTCCACCGTCTGCAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 90 bp TCCCCAGCTGCAGACGGTGGAACGCTAGGCCCGAGAGCATCCATATaGTGGGACATCACGCAGTCCATAAAGACAAGAGGGAGGCAGGTG +
Preference number: 1 (lower is better)
Translates to: SPAADGGTLGPRASI*WDITQSIKTRGRQV
Trigger: CACCTGCCTCCCTCTTGTCTTTATGGACTGCGTGATGTCCCACCATATGGATGCTCTCGGGCCTAGCGTTCCACCGTCTGCAGCTGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 90 bp GGTTACATTCTAGAGGCAACGGTGCACCTGACACGTCATGGTTCCTaGACCGACGAGTCCAGGAGGGCAGACCCATCACCGCGTCTGTCT +
Preference number: 1 (lower is better)
Translates to: GYILEATVHLTRHGS*TDESRRADPSPRLS
Trigger: AGACAGACGCGGTGATGGGTCTGCCCTCCTGGACTCGTCGGTCCAGGAACCATGACGTGTCAGGTGCACCGTTGCCTCTAGAATGTAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 90 bp CCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTaGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCC +
Preference number: 1 (lower is better)
Translates to: PEPTAAGCCTWCTWA*LCCVLSQNQHPPKA
Trigger: GGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 90 bp CCTTCCCTGTCAGGTCGACCCTCCGCATGCCATCATACAGCCTGGTaGCCATCTCTGGGGGAAGAGCTTCCCCGACGTGGTTACATTCTA +
Preference number: 1 (lower is better)
Translates to: PSLSGRPSACHHTAW*PSLGEELPRRGYIL
Trigger: TAGAATGTAACCACGTCGGGGAAGCTCTTCCCCCAGAGATGGTCACCAGGCTGTATGATGGCATGCGGAGGGTCGACCTGACAGGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR TCA 90 bp GAGAGGACATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTaGCGCTCAGGGACCAGGGTAGTCAGATCAAGAGACGAGCACAGG +
Preference number: 1 (lower is better)
Translates to: ERTSRMLSKPLPWST*RSGTRVVRSRDEHR
Trigger: CCTGTGCTCGTCTCTTGATCTGACTACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATGTCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 90 bp TCTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTaGGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTG +
Preference number: 1 (lower is better)
Translates to: SPTAHTSILSNWKFS*ADSCGLLYVVHVGL
Trigger: CAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 90 bp GAGGGCGTCTTCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTaGGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGC +
Preference number: 1 (lower is better)
Translates to: EGVFLAHVGLPGCDP*GTLLQLNHVGGKRG
Trigger: GCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGAAGACGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
3UTR CCA 90 bp AGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTaGGCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCC +
Preference number: 1 (lower is better)
Translates to: SSPEPTAAGCCTWCT*AWLCCVLSQNQHPP
Trigger: GGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 90 bp TCCTCGGAGTTTCCTTTCAACAGGTGGGACATGGATGCTGTGAACTaGTCCTGGGACACGTTCTCACTGGGTCCCTTCGCCTTCCCTGTC +
Preference number: 1 (lower is better)
Translates to: SSEFPFNRWDMDAVN*SWDTFSLGPFAFPV
Trigger: GACAGGGAAGGCGAAGGGACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAACTCCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR GCA 90 bp CCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGCTCTaGTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGT +
Preference number: 1 (lower is better)
Translates to: PTAAGCCTWCTWAWL*CVLSQNQHPPKAQS
Trigger: ACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 90 bp ATCTCATGGCCAACCGGTGACTCACCGTGTGTTGTTTTCCAGACGTaGGCAGATGGCAGCTCTGCTGACCCCACAACCCACCTACACGAT +
Preference number: 1 (lower is better)
Translates to: ISWPTGDSPCVVFQT*ADGSSADPTTHLHD
Trigger: ATCGTGTAGGTGGGTTGTGGGGTCAGCAGAGCTGCCATCTGCCCACGTCTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 90 bp GAGTTTCCTTTCAACAGGTGGGACATGGATGCTGTGAACTGCTCCTaGGACACGTTCTCACTGGGTCCCTTCGCCTTCCCTGTCAGGTCG +
Preference number: 1 (lower is better)
Translates to: EFPFNRWDMDAVNCS*DTFSLGPFAFPVRS
Trigger: CGACCTGACAGGGAAGGCGAAGGGACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR TCA 90 bp CAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTaGCTCACCGTGTGTTGTTTTCCAGACGTGGGCAGATGGCAGCTC +
Preference number: 1 (lower is better)
Translates to: QAHSTFKWGDLMANR*LTVCCFPDVGRWQL
Trigger: GAGCTGCCATCTGCCCACGTCTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR TCA 90 bp TCTTCTCCTCGGAGTTTCCTTTCAACAGGTGGGACATGGATGCTGTaGACTGCTCCTGGGACACGTTCTCACTGGGTCCCTTCGCCTTCC +
Preference number: 1 (lower is better)
Translates to: SSPRSFLSTGGTWML*TAPGTRSHWVPSPS
Trigger: GGAAGGCGAAGGGACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAACTCCGAGGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR GCA 90 bp GAGACTCTTCTCCTCGGAGTTTCCTTTCAACAGGTGGGACATGGATaGTGTGAACTGCTCCTGGGACACGTTCTCACTGGGTCCCTTCGC +
Preference number: 1 (lower is better)
Translates to: ETLLLGVSFQQVGHG*CELLLGHVLTGSLR
Trigger: GCGAAGGGACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAACTCCGAGGAGAAGAGTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR GCA 90 bp ACTGGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTaGACGTGGGCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACAT +
Preference number: 1 (lower is better)
Translates to: TGSSPEPTAAGCCTW*TWAWLCCVLSQNQH
Trigger: ATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 90 bp CATCAGGTACCACCTTCTAACAGGGATGGCCTGAGTGAGGCCATATaGACCCCAGCGGGAGGAACCCCCTCCTCAATAGAGAAGTTGAGA +
Preference number: 1 (lower is better)
Translates to: HQVPPSNRDGLSEAI*TPAGGTPSSIEKLR
Trigger: TCTCAACTTCTCTATTGAGGAGGGGGTTCCTCCCGCTGGGGTTCATATGGCCTCACTCAGGCCATCCCTGTTAGAAGGTGGTACCTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR TCA 90 bp CTCACCGTGTGTTGTTTTCCAGACGTGGGCAGATGGCAGCTCTGCTaGCCCCACAACCCACCTACACGATCTTCAGCATTTCAGGATCAC +
Preference number: 1 (lower is better)
Translates to: LTVCCFPDVGRWQLC*PHNPPTRSSAFQDH
Trigger: GTGATCCTGAAATGCTGAAGATCGTGTAGGTGGGTTGTGGGGTCAGCAGAGCTGCCATCTGCCCACGTCTGGAAAACAACACACGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 90 bp CAAGCTCAGGGTGGAAAGCATGTGAGTGGACAAAGTCCTAACCTTTaGAGCGGCCTGGGCAGAAGCAGCAATCAATGGTCACCAAGGCAC +
Preference number: 1 (lower is better)
Translates to: QAQGGKHVSGQSPNL*SGLGRSSNQWSPRH
Trigger: GTGCCTTGGTGACCATTGATTGCTGCTTCTGCCCAGGCCGCTGCAAAGGTTAGGACTTTGTCCACTCACATGCTTTCCACCCTGAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 90 bp ATGAGAAAGCCCTTGCAAATGACCACACTCAGGAATATGGCCACATaGGGGACCCTGAACACCCAGTCCTCGATCACAGCTCGGTCACAG +
Preference number: 1 (lower is better)
Translates to: MRKPLQMTTLRNMAT*GTLNTQSSITARSQ
Trigger: CTGTGACCGAGCTGTGATCGAGGACTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCTGAGTGTGGTCATTTGCAAGGGCTTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 90 bp GGTCGTTGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATaGAGAACAGGAAGCATCTGTTGTCCCCTTGAAACTGAGGCTTCA +
Preference number: 1 (lower is better)
Translates to: GRCSPCVCTQPCWGR*RTGSICCPLETEAS
Trigger: TGAAGCCTCAGTTTCAAGGGGACAACAGATGCTTCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACAACGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 90 bp GCATTTCAGGATCACCGGAGCTTGTTTAAAGTCAGTCTACACTGCTaGATTTCCCATCATCCCCCTCGGGAGCAGCCCTGGGCAAATGGC +
Preference number: 1 (lower is better)
Translates to: AFQDHRSLFKVSLHC*ISHHPPREQPWANG
Trigger: GCCATTTGCCCAGGGCTGCTCCCGAGGGGGATGATGGGAAATTCAGCAGTGTAGACTGACTTTAAACAAGCTCCGGTGATCCTGAAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 90 bp GCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATaGCTCTGTCCCTCACCCGTCAGAACAGACCATCAGGTACCACCT +
Preference number: 1 (lower is better)
Translates to: AIGSCSQKASRFSSR*LCPSPVRTDHQVPP
Trigger: AGGTGGTACCTGATGGTCTGTTCTGACGGGTGAGGGACAGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 90 bp TCCTTCCCAGTCCAGCCTCTCAGCTCCTGTCTGTGGCTTAGCACGTaGACCACAGAGCCAACCAGATCCTCTGTAAACTTTTGGACTTCT +
Preference number: 1 (lower is better)
Translates to: SFPVQPLSSCLWLST*TTEPTRSSVNFWTS
Trigger: AGAAGTCCAAAAGTTTACAGAGGATCTGGTTGGCTCTGTGGTGCACGTGCTAAGCCACAGACAGGAGCTGAGAGGCTGGACTGGGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 90 bp TATCTTAGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATaGCCAACCGGTGACTCACCGTGTGTTGTTTTCCAGACGTGGGCA +
Preference number: 1 (lower is better)
Translates to: YLRDKLTAPLSGEIS*PTGDSPCVVFQTWA
Trigger: TGCCCACGTCTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCTAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 90 bp AAGCGAGGGACACATCAGTGTGTAAAAGACAGTGATGCCCAGGTGTaGACCAAGTCACAGGGAGGAGACCTGAGTGATTTTTGCATCAGT +
Preference number: 1 (lower is better)
Translates to: KRGTHQCVKDSDAQV*TKSQGGDLSDFCIS
Trigger: ACTGATGCAAAAATCACTCAGGTCTCCTCCCTGTGACTTGGTGCACACCTGGGCATCACTGTCTTTTACACACTGATGTGTCCCTCGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 90 bp TTCATAATCATGAGACTCTTCTCCTCGGAGTTTCCTTTCAACAGGTaGGACATGGATGCTGTGAACTGCTCCTGGGACACGTTCTCACTG +
Preference number: 1 (lower is better)
Translates to: FIIMRLFSSEFPFNR*DMDAVNCSWDTFSL
Trigger: CAGTGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAACTCCGAGGAGAAGAGTCTCATGATTATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR TCA 90 bp GGGACGTGGTTCAAGAGACACACGAGGCAGGCTATCTCTCTCCTCTaGTGTTCATCTCAAGTTAGAAATGTCCCCAAATGTCGTGTGAAT +
Preference number: 1 (lower is better)
Translates to: GTWFKRHTRQAISLL*CSSQVRNVPKCRVN
Trigger: ATTCACACGACATTTGGGGACATTTCTAACTTGAGATGAACATCAGAGGAGAGAGATAGCCTGCCTCGTGTGTCTCTTGAACCACGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR GCA 90 bp AGAGCTGGGTGTGGAACCTTATTACAAATACCTTCTGAGGACTCATaGCACCACCAGACCATGTTACCTCAAAGTCTCCTGCCTCCATTT +
Preference number: 1 (lower is better)
Translates to: RAGCGTLLQIPSEDS*HHQTMLPQSLLPPF
Trigger: AAATGGAGGCAGGAGACTTTGAGGTAACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCACACCCAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 90 bp TGCCCAATGTCCCTCACCTTGAAGTTAGCAAGAGAACCACAACTTTaGTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCA +
Preference number: 1 (lower is better)
Translates to: CPMSLTLKLAREPQL*FSVDRSPNFPICSS
Trigger: TGAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGTTCTCTTGCTAACTTCAAGGTGAGGGACATTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 90 bp GGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGAAAATaGAAGGCCTGCAAAAATGCGAACAGCTCGATTTACTATGGCTTA +
Preference number: 1 (lower is better)
Translates to: GLLLSGRFDEPPSRK*KACKNANSSIYYGL
Trigger: TAAGCCATAGTAAATCGAGCTGTTCGCATTTTTGCAGGCCTTGCATTTTCTACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 90 bp AATGGACCATATACGTATTTATCAACCAAGTTCCCAAACTTAGGGTaGCCAATGTCCCTCACCTTGAAGTTAGCAAGAGAACCACAACTT +
Preference number: 1 (lower is better)
Translates to: NGPYTYLSTKFPNLG*PMSLTLKLAREPQL
Trigger: AAGTTGTGGTTCTCTTGCTAACTTCAAGGTGAGGGACATTGGGCACCCTAAGTTTGGGAACTTGGTTGATAAATACGTATATGGTCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CCA 90 bp CTCCAGGAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCCCGGGGGTTGGGCCCTaGGGCTTCCTTCCCAGTCCA +
Preference number: 2 (lower is better)
Translates to: LQEGSGGSSFIVRDFPEPPGVGP*GFLPSP
Trigger: TGGACTGGGAAGGAAGCCCCAGGGCCCAACCCCCGG...GGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTCCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR GCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGCACCAGCGGTGCCGCTaGTCCCGAGGCAGCTGGGCG +
Preference number: 2 (lower is better)
Translates to: PVRYAITVKPCGREEGLQHQRCR*SRGSWA
Trigger: CGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTG...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CCA 90 bp CAGGCACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGACGGGACACGTTCTCACTaGGTCCCTTCGCCTTCCCTG +
Preference number: 2 (lower is better)
Translates to: QAPAVPLLPRQLGVDVHDGTRSH*VPSPSL
Trigger: CAGGGAAGGCGAAGGGACCCAGTGAGAACGTGTCCC...GTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR TCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCGGGACTACCAGGCTGTaGCCCGTGCGGTACGCTATT +
Preference number: 2 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSGTTRL*PVRYAI
Trigger: AATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCC...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
3UTR-3UTR GCA 90 bp CGAACACATGCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGGGAGGGAAGAGGGGCTaGAGGCGTTGCCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: RTHACHGPRGQPHRVPGEGGKRG*RRCPLP
Trigger: GGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC...CTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CCA 90 bp TTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTGGCGCGAATGCCCACTGATGCGGGCTGTTGTACGTaGTGCACGTGGGCTTGGCTC +
Preference number: 2 (lower is better)
Translates to: FIVRDFPEPFAVARMPTDAGCCT*CTWAWL
Trigger: GAGCCAAGCCCACGTGCACCACGTACAACAGCCCGC...ATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR TCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGAGGCCTAGACAGCTGTaGCTCAGGTGCTGGTTCCCA +
Preference number: 2 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLRPRQL*LRCWFP
Trigger: TGGGAACCAGCACCTGAGTCACAGCTGTCTAGGCCT...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR TCA 90 bp GAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGGGACATGGATGCTGTaGACTGCTCCTGGGACACGT +
Preference number: 2 (lower is better)
Translates to: EGSGGSSFIVRDFPEPFAGTWML*TAPGTR
Trigger: ACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCC...AGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR GCA 90 bp CTCCAGGAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCCCAGGATGCTCTTGTTaGCCTTGGCCAACTGCTCCT +
Preference number: 2 (lower is better)
Translates to: LQEGSGGSSFIVRDFPEPPGCSC*PWPTAP
Trigger: AGGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGG...GGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTCCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CCA 90 bp CTGGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGGAGGAATCCAGGTCCTaGCTCCAGGAAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: LEVLLSRQLRAVVRGARGEESRS*LQEGSG
Trigger: GCCTGAGCCTTCCTGGAGCCAGGACCTGGATTCCTC...CCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTCTGTCTCCCCATCTCTaGGAGGGCAGTCAGGAGGGA +
Preference number: 2 (lower is better)
Translates to: LQALPSTQRNPGPGSRKALSPHL*EGSQEG
Trigger: TCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAG...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCACACGTCATGGTTCCTaGACCGACGAGTCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSTRHGS*TDESRR
Trigger: CCTCCTGGACTCGTCGGTCCAGGAACCATGACGTGT...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR TCA 90 bp CGAACACATGCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGGGGACTACCAGGCTGTaGCCCGTGCGGTACGCTATT +
Preference number: 2 (lower is better)
Translates to: RTHACHGPRGQPHRVPGEGTTRL*PVRYAI
Trigger: AATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCC...CTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR-3UTR GCA 90 bp GAGAAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCAGGGGCTGCAGGCGTTaGCCTCTACCCAGAGGAATC +
Preference number: 2 (lower is better)
Translates to: EKLCPWSSDEKSRHQRCRRGCRR*PLPRGI
Trigger: GATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCT...GCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CAA 90 bp AAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTaGATGTACATGACAGAGAGGACATCCAGGATGCTCTCAAAACCC +
Preference number: 2 (lower is better)
Translates to: KSRHQRCRCSRGSWA*MYMTERTSRMLSKP
Trigger: GGGTTTTGAGAGCATCCTGGATGTCCTCTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR TCA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCAGATGGCAGCTCTGCTaGCCCCACAACCCACCTACA +
Preference number: 2 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCRWQLC*PHNPPT
Trigger: TGTAGGTGGGTTGTGGGGTCAGCAGAGCTGCCATCT...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTCAGGTGGGACATGGATaGTGTGAACTGCTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAQVGHG*CELLLG
Trigger: TCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTG...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR GCA 90 bp AAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTAGCAGGCACCAGCGGTaGCGCTGCTCCCGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: KLRLHLPRARGKPTEHMLSRHQR*RCSRGS
Trigger: GCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCT...AAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTCAGTCAGGAGGGACGTaGTTCAAGAGACACACGAGG +
Preference number: 2 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAQSGGT*FKRHTR
Trigger: CCTCGTGTGTCTCTTGAACCACGTCCCTCCTGACTG...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CAA 90 bp GGAGATCCACCCATGAGTCAGGACATGGCTTCAGAGGGCGTCTTCTaGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTA +
Preference number: 2 (lower is better)
Translates to: GDPPMSQDMASEGVF*AHVGLPGCDPCGTL
Trigger: TAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTGAAGCCATGTCCTGACTCATGGGTGGATCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
3UTR-3UTR TCA 90 bp CAGGCACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGACGAAAGCCCTTGCAAATaGCCACACTCAGGAATATGG +
Preference number: 2 (lower is better)
Translates to: QAPAVPLLPRQLGVDVHDESPCK*PHSGIW
Trigger: CCATATTCCTGAGTGTGGTCATTTGCAAGGGCTTTC...GTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR GCA 90 bp TGGCCACAGAGCTGGGAGAAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGGAGGGGCTGCAGGCGTTaGCCTCTACCCAGAGGAATC +
Preference number: 2 (lower is better)
Translates to: WPQSWEKLCPWSSDEKSRRGCRR*PLPRGI
Trigger: GATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCT...CCTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTCCCAGCTCTGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR GCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGGGCTGTTGTACGTGGTaGACGTGGGCTTGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: PVRYAITVKPCGREEGLQGCCTW*TWAWLC
Trigger: GCAGAGCCAAGCCCACGTGCACCACGTACAACAGCC...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CCA 90 bp GTCGTTGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGGAGGAATCCAGGTCCTaGCTCCAGGAAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: VVVARVCVHSHAGADGEQEESRS*LQEGSG
Trigger: GCCTGAGCCTTCCTGGAGCCAGGACCTGGATTCCTC...CTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACAACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGCACAGCACCTTTAAGTaGGGAGATCTCATGGCCAAC +
Preference number: 2 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLHSTFK*GDLMAN
Trigger: GTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTG...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR TCA 90 bp TCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTATTACAGTCAGGGATGGCCTGAGTaGGGCCATATGAACCCCAGC +
Preference number: 2 (lower is better)
Translates to: SWHMWDYQAVTRAVRYYSQGWPE*GHMNPS
Trigger: GCTGGGGTTCATATGGCCTCACTCAGGCCATCCCTG...ACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR TCA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCCAAGCCCGGGCCAGTaGCCTTTCTCTAAGTGCACT +
Preference number: 2 (lower is better)
Translates to: IASFSEPGKVLSGPLAPAPSPGQ*PFSKCT
Trigger: AGTGCACTTAGAGAAAGGTCACTGGCCCGGGCTTGG...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp TCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTATTACAGTAGGGGCTGCAGGCGTTaGCCTCTACCCAGAGGAATC +
Preference number: 2 (lower is better)
Translates to: SWHMWDYQAVTRAVRYYSRGCRR*PLPRGI
Trigger: GATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCT...ACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
3UTR-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTCCTTCTGAGGACTCATaGCACCACCAGACCATGTTA +
Preference number: 2 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAPSEDS*HHQTML
Trigger: TAACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGG...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CAA 90 bp AGAGAGGACATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTaGACGCTCAGGGACCAGGGTAGTCAGATCAAGAGACGAGCACAG +
Preference number: 2 (lower is better)
Translates to: REDIQDALKTPALVH*TLRDQGSQIKRRAQ
Trigger: CTGTGCTCGTCTCTTGATCTGACTACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATGTCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR TCA 90 bp ATCATACAGCCTGGTGACCATCTCTGGGGGAAGAGCTTCCCCGACGTGGTTACAAGGCAACGGTGCACCTaGCACGTCATGGTTCCTGGA +
Preference number: 2 (lower is better)
Translates to: IIQPGDHLWGKSFPDVVTRQRCT*HVMVPG
Trigger: TCCAGGAACCATGACGTGTCAGGTGCACCGTTGCCT...TGTAACCACGTCGGGGAAGCTCTTCCCCCAGAGATGGTCACCAGGCTGTATGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CCA 90 bp AGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCTGCATCCAGAGGGCGTCTTCTTaGCACATGTGGGACTACCAG +
Preference number: 2 (lower is better)
Translates to: SVQRQNRAPREAHRESCIQRASS*HMWDYQ
Trigger: CTGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTG...GATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGCTCAGCTCCTGTCTGTaGCTTAGCACGTGCACCACA +
Preference number: 2 (lower is better)
Translates to: PVRYAITVKPCGREEGLQLSSCL*LSTCTT
Trigger: TGTGGTGCACGTGCTAAGCCACAGACAGGAGCTGAG...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CCA 90 bp TGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGGAAGCTGCTCCCGAGGCAGCTaGGCGTTGATGTACATGACA +
Preference number: 2 (lower is better)
Translates to: CSPCVCTQPCWGRWRTGSCSRGS*ALMYMT
Trigger: TGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCA...GCTTCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR TCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGTGGGAGATCCACCCATaGGTCAGGACATGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: RFECPEAEPCTKRSPQREWEIHP*VRTWLQ
Trigger: CTGAAGCCATGTCCTGACTCATGGGTGGATCTCCCA...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR TCA 90 bp CAGCTGGGCGTTGATGTACATGACAGAGAGGACATCCAGGATGCTCTCAAAACCCCACATGGGGGACCCTaGACACCCAGTCCTCGATCA +
Preference number: 2 (lower is better)
Translates to: QLGVDVHDREDIQDALKTPHGGP*TPSPRS
Trigger: TGATCGAGGACTGGGTGTTCAGGGTCCCCCATGTGG...GGTTTTGAGAGCATCCTGGATGTCCTCTCTGTCATGTACATCAACGCCCAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR GCA 90 bp TCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTATTACAGTTGCTCTCAAAACCCCTaGCCTGGTCCACTTGACGCT +
Preference number: 2 (lower is better)
Translates to: SWHMWDYQAVTRAVRYYSCSQNP*PGPLDA
Trigger: AGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCA...ACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR-3UTR GCA 90 bp GAGATCTCATGGCCAACCGGTGACTCACCGTGTGTTGTTTTCCAGACGTGGGCACCAGGCTGTGACCCGTaGGGTACGCTATTACAGTTA +
Preference number: 2 (lower is better)
Translates to: EISWPTGDSPCVVFQTWAPGCDP*GTLLQL
Trigger: TAACTGTAATAGCGTACCGCACGGGTCACAGCCTGG...TGCCCACGTCTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CCA 90 bp AGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTGTCATGCAGAGGGCGTCTTCTTaGCACATGTGGGACTACCAG +
Preference number: 2 (lower is better)
Translates to: RLHLPRARGKPTEHMLVMQRASS*HMWDYQ
Trigger: CTGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTG...CATGACAAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR-3UTR CCA 90 bp TGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGGAAGCAACACATGCTTGTCATaGTCCTCGAGGACAGCCACA +
Preference number: 2 (lower is better)
Translates to: CSPCVCTQPCWGRWRTGSNTCLS*SSRTAT
Trigger: TGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTT...GCTTCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR TCA 90 bp CTGGGTGTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGACTGAGTGAGGCCATATaGACCCCAGCGGGAGGAACC +
Preference number: 2 (lower is better)
Translates to: LGVEPYYKYLLRTHATTRLSEAI*TPAGGT
Trigger: GGTTCCTCCCGCTGGGGTTCATATGGCCTCACTCAG...TCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCACACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp AGAACCCAGGCCAGTCACTCACCACTGATTTATGGAATGGACCATATACGTATTGGAGGGAAGAGGGGCTaGAGGCGTTGCCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: RTQASHSPLIYGMDHIRIGGKRG*RRCPLP
Trigger: GGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC...AATACGTATATGGTCCATTCCATAAATCAGTGGTGAGTGACTGGCCTGGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CCA 90 bp CTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGACATCTTCTTGGCACATGTaGGACTACCAGGCTGTGACC +
Preference number: 2 (lower is better)
Translates to: LQPPTPPSYQTGSSPEPTSSWHM*DYQAVT
Trigger: GGTCACAGCCTGGTAGTCCCACATGTGCCAAGAAGA...TGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR-3UTR CCA 90 bp GCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTGCACCTGACACGTCATaGTTCCTGGACCGACGAGTC +
Preference number: 2 (lower is better)
Translates to: AWLCCVLSQNQHPPKAQSAPDTS*FLDRRV
Trigger: GACTCGTCGGTCCAGGAACCATGACGTGTCAGGTGC...ACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR GCA 90 bp CTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGACAATGGATGCTGTGAACTaGTCCTGGGACACGTTCTCA +
Preference number: 2 (lower is better)
Translates to: LQPPTPPSYQTGSSPEPTMDAVN*SWDTFS
Trigger: TGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCAT...TGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CCA 90 bp TCCATGGTTCAAGTACATGTAGTGGTCGTTGTAGCCCGTGTGTGTGTACACAGCGCTGTGAACTGCTCCTaGGACACGTTCTCACTGGGT +
Preference number: 2 (lower is better)
Translates to: SMVQVHVVVVVARVCVHSAVNCS*DTFSLG
Trigger: ACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGC...GCTGTGTACACACACACGGGCTACAACGACCACTACATGTACTTGAACCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CCA 90 bp GTCGTTGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGTTTCCTTTCAACAGGTaGGACATGGATGCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: VVVARVCVHSHAGADGEQFPFNR*DMDAVN
Trigger: GTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAA...CTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACAACGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR TCA 90 bp GACCTTTCTCTAAGTGCACTGCCTGGAAGCAGGTGCATTCGTGATCTGCACTCTGTCAGTCTACACTGCTaGATTTCCCATCATCCCCCT +
Preference number: 2 (lower is better)
Translates to: DLSLSALPGSRCIRDLHSVSLHC*ISHHPP
Trigger: AGGGGGATGATGGGAAATTCAGCAGTGTAGACTGAC...AGAGTGCAGATCACGAATGCACCTGCTTCCAGGCAGTGCACTTAGAGAAAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp GAGATCTCATGGCCAACCGGTGACTCACCGTGTGTTGTTTTCCAGACGTGGGCAAATACAGAACTCCCATaGCATTGGAAGCTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: EISWPTGDSPCVVFQTWANTELP*HWKLFP
Trigger: TGGGAACAGCTTCCAATGGCATGGGAGTTCTGTATT...TGCCCACGTCTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp AGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCTGCATCTACCTCAAAGTCTCCTaGCTCCATTTCCCCATTTTA +
Preference number: 2 (lower is better)
Translates to: SVQRQNRAPREAHRESCIYLKVS*LHFPIL
Trigger: TAAAATGGGGAAATGGAGGCAGGAGACTTTGAGGTA...GATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp ACTGCTGAATTTCCCATCATCCCCCTCGGGAGCAGCCCTGGGCAAATGGCTGCAAGAGAACCACAACTTTaGTTCTCTGTAGACAGATCT +
Preference number: 2 (lower is better)
Translates to: TAEFPIIPLGSSPGQMAAREPQL*FSVDRS
Trigger: AGATCTGTCTACAGAGAAGCAAAGTTGTGGTTCTCT...TGCAGCCATTTGCCCAGGGCTGCTCCCGAGGGGGATGATGGGAAATTCAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp GCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAACCCACCGAACACATaGTTGTCATGGTCCTCGAGG +
Preference number: 2 (lower is better)
Translates to: AWLCCVLSQNQHPPKAQSNPPNT*LSWSSR
Trigger: CCTCGAGGACCATGACAAGCATGTGTTCGGTGGGTT...ACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CCA 90 bp AGAACCCAGGCCAGTCACTCACCACTGATTTATGGAATGGACCATATACGTATTGAGGAATCCAGGTCCTaGCTCCAGGAAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: RTQASHSPLIYGMDHIRIEESRS*LQEGSG
Trigger: GCCTGAGCCTTCCTGGAGCCAGGACCTGGATTCCTC...AATACGTATATGGTCCATTCCATAAATCAGTGGTGAGTGACTGGCCTGGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR TCA 90 bp TGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATTGGGAGATCCACCCATaGGTCAGGACATGGCTTCAG +
Preference number: 2 (lower is better)
Translates to: WLCCVLSQNQHPPKAQSNWEIHP*VRTWLQ
Trigger: CTGAAGCCATGTCCTGACTCATGGGTGGATCTCCCA...ATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR-3UTR CCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGCAGCTCGATTTACTATaGCTTATAATCAAGGCAAAC +
Preference number: 2 (lower is better)
Translates to: PVRYAITVKPCGREEGLQQLDLL*LIIKAN
Trigger: GTTTGCCTTGATTATAAGCCATAGTAAATCGAGCTG...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CAA 90 bp GTGCCCAATGTCCCTCACCTTGAAGTTAGCAAGAGAACCACAACTTaGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: VPNVPHLEVSKRTTT*LLCRQISQLSHLFL
Trigger: GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGTTCTCTTGCTAACTTCAAGGTGAGGGACATTGGGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR TCA 90 bp CAGCTGGGCGTTGATGTACATGACAGAGAGGACATCCAGGATGCTCTCAAAACCGCTATCTCTCTCCTCTaGTGTTCATCTCAAGTTAGA +
Preference number: 2 (lower is better)
Translates to: QLGVDVHDREDIQDALKTAISLL*CSSQVR
Trigger: TCTAACTTGAGATGAACATCAGAGGAGAGAGATAGC...GGTTTTGAGAGCATCCTGGATGTCCTCTCTGTCATGTACATCAACGCCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CCA 90 bp GACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACTCACTCACCACTGATTTATaGAATGGACCATATACGTAT +
Preference number: 2 (lower is better)
Translates to: DKLTAPLSGEISWPTGDSLTTDL*NGPYTY
Trigger: ATACGTATATGGTCCATTCCATAAATCAGTGGTGAG...TGAGTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR TCA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCATTACAAATACCTTCTaGGGACTCATGCCACCACCA +
Preference number: 2 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLITNTF*GLMPPP
Trigger: TGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAAT...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CCA 90 bp AGAACAAACTATTCATTTGTGCAAACTAGGATTGCGAGTTTCTCAGAGCCAGGTTCTTCTTGGCACATGTaGGACTACCAGGCTGTGACC +
Preference number: 2 (lower is better)
Translates to: RTNYSFVQTRIASFSEPGSSWHM*DYQAVT
Trigger: GGTCACAGCCTGGTAGTCCCACATGTGCCAAGAAGA...ACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CAA 90 bp TTATCAACCAAGTTCCCAAACTTAGGGTGCCCAATGTCCCTCACCTaGAAGTTAGCAAGAGAACCACAACTTTGCTTCTCTGTAGACAGA +
Preference number: 2 (lower is better)
Translates to: LSTKFPNLGCPMSLT*KLAREPQLCFSVDR
Trigger: TCTGTCTACAGAGAAGCAAAGTTGTGGTTCTCTTGCTAACTTCAAGGTGAGGGACATTGGGCACCCTAAGTTTGGGAACTTGGTTGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CAA 90 bp TCTGGTTTCACAAAAGAACAAACTATTCATTTGTGCAAACTAGGATaGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGG +
Preference number: 2 (lower is better)
Translates to: SGFTKEQTIHLCKLG*RVSQSQVRYCQVHW
Trigger: CCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCTTTTGTGAAACCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR TCA 90 bp AGAACAAACTATTCATTTGTGCAAACTAGGATTGCGAGTTTCTCAGAGCCAGGTAAGCAGGTGCATTCGTaGTCTGCACTCTCCTTAGAA +
Preference number: 2 (lower is better)
Translates to: RTNYSFVQTRIASFSEPGKQVHS*SALSLE
Trigger: TTCTAAGGAGAGTGCAGATCACGAATGCACCTGCTT...ACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp AGAACAAACTATTCATTTGTGCAAACTAGGATTGCGAGTTTCTCAGAGCCAGGTCCTCCCAGTAGAAAATaGAAGGCCTGCAAAAATGCG +
Preference number: 2 (lower is better)
Translates to: RTNYSFVQTRIASFSEPGPPSRK*KACKNA
Trigger: CGCATTTTTGCAGGCCTTGCATTTTCTACTGGGAGG...ACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CCA 90 bp AGAACAAACTATTCATTTGTGCAAACTAGGATTGCGAGTTTCTCAGAGCCAGGTAGAACAAGCTCAGGGTaGAAAGCATGTGAGTGGACA +
Preference number: 2 (lower is better)
Translates to: RTNYSFVQTRIASFSEPGRTSSG*KACEWT
Trigger: TGTCCACTCACATGCTTTCCACCCTGAGCTTGTTCT...ACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR GCA 90 bp ACCACTGATTTATGGAATGGACCATATACGTATTTATCAACCAAGTTCCCAAACAGATTTTCATCCAGATaGCTCTGTCCCTCACCCGTC +
Preference number: 2 (lower is better)
Translates to: TTDLWNGPYTYLSTKFPNRFSSR*LCPSPV
Trigger: GACGGGTGAGGGACAGAGGCATCTGGATGAAAATCT...GTTTGGGAACTTGGTTGATAAATACGTATATGGTCCATTCCATAAATCAGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp TCCGGGACTTCCCGGAGCCCTTCGCTGTGGCGCGAATaGCCACTGATCTCCAGCAGGGCCTGGGCCTCAGGG +
Preference number: 3 (lower is better)
Translates to: SGTSRSPSLWRE*PLISSRAWASG
Trigger: CCCTGAGGCCCAGGCCCTGCTGGAGATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCGGGAAGTCCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CAA 90 bp GAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTACCTGCACCCGGGGGTaGGGCCCTGGGGCTTCCTTC +
Preference number: 3 (lower is better)
Translates to: EGSGGSSFIVRDFPEPFATCTRG*GPGASF
Trigger: GAAGGAAGCCCCAGGGCCCAACCCCCGGGTGCAGGT...AGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CAA 90 bp GAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGACAGCTGCGGGCTGTaGTACGTGGTGCACGTGGGC +
Preference number: 3 (lower is better)
Translates to: EGSGGSSFIVRDFPEPFADSCGL*YVVHVG
Trigger: GCCCACGTGCACCACGTACAACAGCCCGCAGCTGTC...AGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 72 bp CAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCTaGATCCCCCAGGCTCCCAAGCCCGGGCCAGTGACC +
Preference number: 3 (lower is better)
Translates to: QNRAPREAHRES*IPQAPKPGPVT
Trigger: GGTCACTGGCCCGGGCTTGGGAGCCTGGGGGATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 72 bp CATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTaGCGCGAATGCCCACTGATCTCCAGCAGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: HSSSGTSRSPSL*RECPLISSRAW
Trigger: CCAGGCCCTGCTGGAGATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 72 bp CCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTaGCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTAC +
Preference number: 3 (lower is better)
Translates to: PWSSDEKSRHQR*RCSRGSWALMY
Trigger: GTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 72 bp AGCAGGCACCAGCGGTGCCGCTGCTCCCGAGGCAGCTaGGCGTTGATGTACATGACAGAGAGGACATCCAGG +
Preference number: 3 (lower is better)
Translates to: SRHQRCRCSRGS*ALMYMTERTSR
Trigger: CCTGGATGTCCTCTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CAA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGTCCAGGATGCTCTTGTaGCCCTTGGCCAACTGCTCC +
Preference number: 3 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLSRMLL*PLANCS
Trigger: GGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGGA...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 72 bp AGAGCTGCATCCCCCAGGCTCCCAAGCCCGGGCCAGTaGCCTTTCTCTAAGTGCACTGCCTGGAAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: RAASPRLPSPGQ*PFSKCTAWKQV
Trigger: CACCTGCTTCCAGGCAGTGCACTTAGAGAAAGGTCACTGGCCCGGGCTTGGGAGCCTGGGGGATGCAGCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR TCA 72 bp GGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGTaGTGTGGCCACAGAGCTGGGAGAAGCTGTGTCCAT +
Preference number: 3 (lower is better)
Translates to: GPRGQPHRVPGE*CGHRAGRSCVH
Trigger: ATGGACACAGCTTCTCCCAGCTCTGTGGCCACATCACTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 72 bp AGGGCAGACCCATCACCGCGTCTGTCTCCCCATCTCTaGGAGGGCAGTCAGGAGGGACGTGGTTCAAGAGAC +
Preference number: 3 (lower is better)
Translates to: RADPSPRLSPHL*EGSQEGRGSRD
Trigger: GTCTCTTGAACCACGTCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAGACGCGGTGATGGGTCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 72 bp CTAGAGGCAACGGTGCACCTGACACGTCATGGTTCCTaGACCGACGAGTCCAGGAGGGCAGACCCATCACCG +
Preference number: 3 (lower is better)
Translates to: LEATVHLTRHGS*TDESRRADPSP
Trigger: CGGTGATGGGTCTGCCCTCCTGGACTCGTCGGTCCAGGAACCATGACGTGTCAGGTGCACCGTTGCCTCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 72 bp GCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTaGCTCCAGGAAGGCTCAGGCGGCTCCTCATTCATC +
Preference number: 3 (lower is better)
Translates to: AGVALYPEESRS*LQEGSGGSSFI
Trigger: GATGAATGAGGAGCCGCCTGAGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CAA 90 bp AGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTGGCCCCAGAAGTCTCTaGCCATCTTGCAGCTTCATG +
Preference number: 3 (lower is better)
Translates to: RLRRLLIHRPGLPGALRCGPRSL*PSCSFM
Trigger: CATGAAGCTGCAAGATGGCAAGAGACTTCTGGGGCC...ACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CAA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGATGCTCTTGTTGCCCTaGGCCAACTGCTCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLMLLLP*ANCSSE
Trigger: CTCAGAGGAGCAGTTGGCCAAGGGCAACAAGAGCAT...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CAA 90 bp TTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTGGCGCGAATGCCCACTGATGCATCCAGGATGCTCTaGTTGCCCTTGGCCAACTGC +
Preference number: 3 (lower is better)
Translates to: FIVRDFPEPFAVARMPTDASRML*LPLANC
Trigger: GCAGTTGGCCAAGGGCAACAAGAGCATCCTGGATGC...ATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 72 bp TCAGGTCGACCCTCCGCATGCCATCATACAGCCTGGTaGCCATCTCTGGGGGAAGAGCTTCCCCGACGTGGT +
Preference number: 3 (lower is better)
Translates to: SGRPSACHHTAW*PSLGEELPRRG
Trigger: ACCACGTCGGGGAAGCTCTTCCCCCAGAGATGGTCACCAGGCTGTATGATGGCATGCGGAGGGTCGACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR GCA 72 bp AGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTaGTCCCGAGGCAGCTGGGCGTTGATGTACATGACA +
Preference number: 3 (lower is better)
Translates to: SSDEKSRHQRCR*SRGSWALMYMT
Trigger: TGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 72 bp TCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTaGACGTGGGCTTGGCTCTGCTGTGTCCTTTCCCAA +
Preference number: 3 (lower is better)
Translates to: SPEPTAAGCCTW*TWAWLCCVLSQ
Trigger: TTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CAA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGGAGGGGCTGCAGGCGTaGCCCTCTACCCAGAGGAAT +
Preference number: 3 (lower is better)
Translates to: PVRYAITVKPCGREEGLQEGLQA*PSTQRN
Trigger: ATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTC...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CAA 90 bp GGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTCAGAGGGCGTCTTCTaGGCACATGTGGGACTACCA +
Preference number: 3 (lower is better)
Translates to: GSSPEPTAAGCCTWCTWASEGVF*AHVGLP
Trigger: TGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTGA...AGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR CCA 72 bp GTCTCCCCATCTCTGGGAGGGCAGTCAGGAGGGACGTaGTTCAAGAGACACACGAGGCAGGCTATCTCTCTC +
Preference number: 3 (lower is better)
Translates to: VSPSLGGQSGGT*FKRHTRQAISL
Trigger: GAGAGAGATAGCCTGCCTCGTGTGTCTCTTGAACCACGTCCCTCCTGACTGCCCTCCCAGAGATGGGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CAA 90 bp GCAAATGACCACACTCAGGAATATGGCCACATGGGGGACCCTGAACACCCAGTCGAGGGGCTGCAGGCGTaGCCCTCTACCCAGAGGAAT +
Preference number: 3 (lower is better)
Translates to: ANDHTQEYGHMGDPEHPVEGLQA*PSTQRN
Trigger: ATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTC...GACTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCTGAGTGTGGTCATTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CAA 90 bp TGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGAAGGATGAGAAAGCCCTaGCAAATGACCACACTCAGG +
Preference number: 3 (lower is better)
Translates to: CPWSSDEKSRHQRCRCSRRMRKP*QMTTLR
Trigger: CCTGAGTGTGGTCATTTGCAAGGGCTTTCTCATCCT...TCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 72 bp CCACCTTCTAACAGGGATGGCCTGAGTGAGGCCATATaGACCCCAGCGGGAGGAACCCCCTCCTCAATAGAG +
Preference number: 3 (lower is better)
Translates to: PPSNRDGLSEAI*TPAGGTPSSIE
Trigger: CTCTATTGAGGAGGGGGTTCCTCCCGCTGGGGTTCATATGGCCTCACTCAGGCCATCCCTGTTAGAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR TCA 72 bp CACTGGCCCCAGCCCTGCACACGCCCTAAAAAGGTTTaGGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAG +
Preference number: 3 (lower is better)
Translates to: HWPQPCTRPKKV*VSRGRTVHQEK
Trigger: CTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCTTTTTAGGGCGTGTGCAGGGCTGGGGCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 72 bp TTACATTCTAGAGGCAACGGTGCACCTGACACGTCATaGTTCCTGGACCGACGAGTCCAGGAGGGCAGACCC +
Preference number: 3 (lower is better)
Translates to: LHSRGNGAPDTS*FLDRRVQEGRP
Trigger: GGGTCTGCCCTCCTGGACTCGTCGGTCCAGGAACCATGACGTGTCAGGTGCACCGTTGCCTCTAGAATGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 72 bp GAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTaGGCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAA +
Preference number: 3 (lower is better)
Translates to: EPTAAGCCTWCT*AWLCCVLSQNQ
Trigger: TTGATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 72 bp TCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTaGCGCTCAGGGACCAGGGTAGTCAGATCAAGAGAC +
Preference number: 3 (lower is better)
Translates to: SRMLSKPLPWST*RSGTRVVRSRD
Trigger: GTCTCTTGATCTGACTACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 72 bp GCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTaGGCCGACAGCTGCGGGCTGTTGTACGTGGTGCAC +
Preference number: 3 (lower is better)
Translates to: AHTSILSNWKFS*ADSCGLLYVVH
Trigger: GTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR GCA 72 bp ACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATaGTTGTCATGGTCCTCGAGGACAGCCACACAGGGT +
Preference number: 3 (lower is better)
Translates to: TSQEQEANPPNT*LSWSSRTATQG
Trigger: ACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 72 bp GACGGTGGAACGCTAGGCCCGAGAGCATCCATATGGTaGGACATCACGCAGTCCATAAAGACAAGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: DGGTLGPRASIW*DITQSIKTRGR
Trigger: CCTCCCTCTTGTCTTTATGGACTGCGTGATGTCCCACCATATGGATGCTCTCGGGCCTAGCGTTCCACCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 72 bp GCAGACGGTGGAACGCTAGGCCCGAGAGCATCCATATaGTGGGACATCACGCAGTCCATAAAGACAAGAGGG +
Preference number: 3 (lower is better)
Translates to: ADGGTLGPRASI*WDITQSIKTRG
Trigger: CCCTCTTGTCTTTATGGACTGCGTGATGTCCCACCATATGGATGCTCTCGGGCCTAGCGTTCCACCGTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CAA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCCAGGATCACCGGAGCTaGTTTAAAGTCAGTCTACAC +
Preference number: 3 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCQDHRS*FKVSLH
Trigger: GTGTAGACTGACTTTAAACAAGCTCCGGTGATCCTG...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CAA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCCCTGAGTCAGGGCTATaGCTAAGTGGAAGGTTTGAT +
Preference number: 3 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCPESGL*LSGRFD
Trigger: ATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGG...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CAA 90 bp AGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCTGCATCGTCATGACTAAGTCCTaGTCTGCATCACGCTCCTGC +
Preference number: 3 (lower is better)
Translates to: SVQRQNRAPREAHRESCIVMTKS*SASRSC
Trigger: GCAGGAGCGTGATGCAGACAAGGACTTAGTCATGAC...GATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp GCCCTAAAAAGGTTTGAGTGTCCAGAGGCAGAACCGTaGACCAAGAGAAGCCCACAGAGAGAGCTGCATCCC +
Preference number: 3 (lower is better)
Translates to: ALKRFECPEAEP*TKRSPQRELHP
Trigger: GGGATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCTTTTTAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp TTTCCTTTCAACAGGTGGGACATGGATGCTGTGAACTaGTCCTGGGACACGTTCTCACTGGGTCCCTTCGCC +
Preference number: 3 (lower is better)
Translates to: FPFNRWDMDAVN*SWDTFSLGPFA
Trigger: GGCGAAGGGACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR GCA 72 bp GCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGCTCTaGTGTGTCCTTTCCCAAAATCAACATCCACCCAAA +
Preference number: 3 (lower is better)
Translates to: AGCCTWCTWAWL*CVLSQNQHPPK
Trigger: TTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR CCA 72 bp CCCTTGCAAATGACCACACTCAGGAATATGGCCACATaGGGGACCCTGAACACCCAGTCCTCGATCACAGCT +
Preference number: 3 (lower is better)
Translates to: PLQMTTLRNMAT*GTLNTQSSITA
Trigger: AGCTGTGATCGAGGACTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCTGAGTGTGGTCATTTGCAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 72 bp ACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTaGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCA +
Preference number: 3 (lower is better)
Translates to: TAAGCCTWCTWA*LCCVLSQNQHP
Trigger: TGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR-3UTR CAA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGAGGATGAGAAAGCCCTaGCAAATGACCACACTCAGG +
Preference number: 3 (lower is better)
Translates to: PVRYAITVKPCGREEGLQRMRKP*QMTTLR
Trigger: CCTGAGTGTGGTCATTTGCAAGGGCTTTCTCATCCT...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 72 bp GGGCGTCTTCTTGGCACATGTGGGACTACCAGGCTGTaGCCCGTGCGGTACGCTATTACAGTTAAACCATGT +
Preference number: 3 (lower is better)
Translates to: GRLLGTCGTTRL*PVRYAITVKPC
Trigger: ACATGGTTTAACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGAAGACGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
3UTR TCA 72 bp GATCACCGGAGCTTGTTTAAAGTCAGTCTACACTGCTaGATTTCCCATCATCCCCCTCGGGAGCAGCCCTGG +
Preference number: 3 (lower is better)
Translates to: DHRSLFKVSLHC*ISHHPPREQPW
Trigger: CCAGGGCTGCTCCCGAGGGGGATGATGGGAAATTCAGCAGTGTAGACTGACTTTAAACAAGCTCCGGTGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR TCA 72 bp AGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTaGCTCACCGTGTGTTGTTTTCCAGACGTGGGCAGA +
Preference number: 3 (lower is better)
Translates to: STFKWGDLMANR*LTVCCFPDVGR
Trigger: TCTGCCCACGTCTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp TTCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTaGGGTACGCTATTACAGTTAAACCATGTGGGAGGG +
Preference number: 3 (lower is better)
Translates to: FLAHVGLPGCDP*GTLLQLNHVGG
Trigger: CCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
3UTR GCA 72 bp GTCCAGCCTCTCAGCTCCTGTCTGTGGCTTAGCACGTaGACCACAGAGCCAACCAGATCCTCTGTAAACTTT +
Preference number: 3 (lower is better)
Translates to: VQPLSSCLWLST*TTEPTRSSVNF
Trigger: AAAGTTTACAGAGGATCTGGTTGGCTCTGTGGTGCACGTGCTAAGCCACAGACAGGAGCTGAGAGGCTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR CCA 72 bp TTAGCTGCAAACAAAATGTTCCCCAGCTGCAGACGGTaGAACGCTAGGCCCGAGAGCATCCATATGGTGGGA +
Preference number: 3 (lower is better)
Translates to: LAANKMFPSCRR*NARPESIHMVG
Trigger: TCCCACCATATGGATGCTCTCGGGCCTAGCGTTCCACCGTCTGCAGCTGGGGAACATTTTGTTTGCAGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR TCA 72 bp TGTTGTTTTCCAGACGTGGGCAGATGGCAGCTCTGCTaGCCCCACAACCCACCTACACGATCTTCAGCATTT +
Preference number: 3 (lower is better)
Translates to: CCFPDVGRWQLC*PHNPPTRSSAF
Trigger: AAATGCTGAAGATCGTGTAGGTGGGTTGTGGGGTCAGCAGAGCTGCCATCTGCCCACGTCTGGAAAACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp AGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATaGCTCTGTCCCTCACCCGTCAGAACAGACCATCAG +
Preference number: 3 (lower is better)
Translates to: SCSQKASRFSSR*LCPSPVRTDHQ
Trigger: CTGATGGTCTGTTCTGACGGGTGAGGGACAGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp TCAGTCATGACTAAGTCCTTGTCTGCATCACGCTCCTaGCCCTCCACACACTGTCTGAGCGTGCACTTTTCT +
Preference number: 3 (lower is better)
Translates to: SVMTKSLSASRS*PSTHCLSVHFS
Trigger: AGAAAAGTGCACGCTCAGACAGTGTGTGGAGGGGCAGGAGCGTGATGCAGACAAGGACTTAGTCATGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp GGTGGAAAGCATGTGAGTGGACAAAGTCCTAACCTTTaGAGCGGCCTGGGCAGAAGCAGCAATCAATGGTCA +
Preference number: 3 (lower is better)
Translates to: GGKHVSGQSPNL*SGLGRSSNQWS
Trigger: TGACCATTGATTGCTGCTTCTGCCCAGGCCGCTGCAAAGGTTAGGACTTTGTCCACTCACATGCTTTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 72 bp GACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATaGCCAACCGGTGACTCACCGTGTGTTGTTTTCCAG +
Preference number: 3 (lower is better)
Translates to: DKLTAPLSGEIS*PTGDSPCVVFQ
Trigger: CTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 72 bp ATGAGACTCTTCTCCTCGGAGTTTCCTTTCAACAGGTaGGACATGGATGCTGTGAACTGCTCCTGGGACACG +
Preference number: 3 (lower is better)
Translates to: MRLFSSEFPFNR*DMDAVNCSWDT
Trigger: CGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAACTCCGAGGAGAAGAGTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
3UTR-3UTR CAA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACAGAACTCCCATGCCATaGGAAGCTGTTCCCAGAAAG +
Preference number: 3 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDRTPMP*EAVPRK
Trigger: CTTTCTGGGAACAGCTTCCAATGGCATGGGAGTTCT...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CAA 90 bp GCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTGCATCTGTTGTCCCCTaGAAACTGAGGCTTCACCTC +
Preference number: 3 (lower is better)
Translates to: AWLCCVLSQNQHPPKAQSASVVP*KLRLHL
Trigger: GAGGTGAAGCCTCAGTTTCAAGGGGACAACAGATGC...ACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
3UTR TCA 72 bp TTCTCTAAGTGCACTGCCTGGAAGCAGGTGCATTCGTaGTCTGCACTCTCCTTAGAACAAGCTCAGGGTGGA +
Preference number: 3 (lower is better)
Translates to: FSKCTAWKQVHS*SALSLEQAQGG
Trigger: TCCACCCTGAGCTTGTTCTAAGGAGAGTGCAGATCACGAATGCACCTGCTTCCAGGCAGTGCACTTAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR TCA 72 bp GAGAGCTGGGTGTGGAACCTTATTACAAATACCTTCTaGGGACTCATGCCACCACCAGACCATGTTACCTCA +
Preference number: 3 (lower is better)
Translates to: ESWVWNLITNTF*GLMPPPDHVTS
Trigger: TGAGGTAACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCACACCCAGCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp ACACATCAGTGTGTAAAAGACAGTGATGCCCAGGTGTaGACCAAGTCACAGGGAGGAGACCTGAGTGATTTT +
Preference number: 3 (lower is better)
Translates to: THQCVKDSDAQV*TKSQGGDLSDF
Trigger: AAAATCACTCAGGTCTCCTCCCTGTGACTTGGTGCACACCTGGGCATCACTGTCTTTTACACACTGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CAA 90 bp AGAACAAACTATTCATTTGTGCAAACTAGGATTGCGAGTTTCTCAGAGCCAGGTTCAGAGGGCGTCTTCTaGGCACATGTGGGACTACCA +
Preference number: 3 (lower is better)
Translates to: RTNYSFVQTRIASFSEPGSEGVF*AHVGLP
Trigger: TGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTGA...ACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR TCA 72 bp CCCAGAGGTCTAGAACCCAGGCCAGTCACTCACCACTaGTTTATGGAATGGACCATATACGTATTTATCAAC +
Preference number: 3 (lower is better)
Translates to: PRGLEPRPVTHH*FMEWTIYVFIN
Trigger: GTTGATAAATACGTATATGGTCCATTCCATAAATCAGTGGTGAGTGACTGGCCTGGGTTCTAGACCTCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp TGTGGAACCTTATTACAAATACCTTCTGAGGACTCATaGCACCACCAGACCATGTTACCTCAAAGTCTCCTG +
Preference number: 3 (lower is better)
Translates to: CGTLLQIPSEDS*HHQTMLPQSLL
Trigger: CAGGAGACTTTGAGGTAACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp TCCCTCACCTTGAAGTTAGCAAGAGAACCACAACTTTaGTTCTCTGTAGACAGATCTCCCAACTTTCCCATC +
Preference number: 3 (lower is better)
Translates to: SLTLKLAREPQL*FSVDRSPNFPI
Trigger: GATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGTTCTCTTGCTAACTTCAAGGTGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp CTAAGTGGAAGGTTTGATGAACCTCCCAGTAGAAAATaGAAGGCCTGCAAAAATGCGAACAGCTCGATTTAC +
Preference number: 3 (lower is better)
Translates to: LSGRFDEPPSRK*KACKNANSSIY
Trigger: GTAAATCGAGCTGTTCGCATTTTTGCAGGCCTTGCATTTTCTACTGGGAGGTTCATCAAACCTTCCACTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp AGGTTTGATGAACCTCCCAGTAGAAAATGCAAGGCCTaGAAAAATGCGAACAGCTCGATTTACTATGGCTTA +
Preference number: 3 (lower is better)
Translates to: RFDEPPSRKCKA*KNANSSIYYGL
Trigger: TAAGCCATAGTAAATCGAGCTGTTCGCATTTTTGCAGGCCTTGCATTTTCTACTGGGAGGTTCATCAAACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CCA 72 bp CAGTTCATGCTTTTAAATACAGAACTCCCATGCCATTaGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATC +
Preference number: 3 (lower is better)
Translates to: QFMLLNTELPCH*KLFPESVEIFI
Trigger: GATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCATGGGAGTTCTGTATTTAAAAGCATGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp TATACACAGTTCATGCTTTTAAATACAGAACTCCCATaGCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATT +
Preference number: 3 (lower is better)
Translates to: YTQFMLLNTELP*HWKLFPESVEI
Trigger: AATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCATGGGAGTTCTGTATTTAAAAGCATGAACTGTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR GCA 72 bp TATACGTATTTATCAACCAAGTTCCCAAACTTAGGGTaGCCAATGTCCCTCACCTTGAAGTTAGCAAGAGAA +
Preference number: 3 (lower is better)
Translates to: YTYLSTKFPNLG*PMSLTLKLARE
Trigger: TTCTCTTGCTAACTTCAAGGTGAGGGACATTGGGCACCCTAAGTTTGGGAACTTGGTTGATAAATACGTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR-3UTR CAA 90 bp ACCACTGATTTATGGAATGGACCATATACGTATTTATCAACCAAGTTCCCAAACAAGAGAACCACAACTTaGCTTCTCTGTAGACAGATC +
Preference number: 3 (lower is better)
Translates to: TTDLWNGPYTYLSTKFPNKRTTT*LLCRQI
Trigger: GATCTGTCTACAGAGAAGCAAAGTTGTGGTTCTCTT...GTTTGGGAACTTGGTTGATAAATACGTATATGGTCCATTCCATAAATCAGTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp CAGCTGAGCAGCCAGCACCTGCACCCGGGGGTTGGGCCCTGGGGCTTCCTTCCCTCCTGCCGGGCTTCCTaGTGCTGTCCGGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QLSSQHLHPGVGPWGFLPSCRAS*CCPVRS
Trigger: GGACCGGACCGGACAGCACCAGGAAGCCCGGCAGGA...GGGAAGGAAGCCCCAGGGCCCAACCCCCGGGTGCAGGTGCTGGCTGCTCAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp GGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCACCAGCGGTGCCGCTaGTCCCGAGGCAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRGAAGVALYPEESRSWLHQRCR*SRGSWA
Trigger: CGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTG...GAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGACAGAGAGCAGGCACCAGCGGTaGCGCTGCTCCCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: HQRCRCSRGSWALMYMTESRHQR*RCSRGS
Trigger: GCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCT...CTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGCCCTGCCGGGCTTCCTaGTGCTGTCCGGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLPCRAS*CCPVRS
Trigger: GGACCGGACCGGACAGCACCAGGAAGCCCGGCAGGG...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR TCA 90 bp CACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGACAGAGGGCCAACTGCTCCTCTaGGGGGTCTCCAACCGCCCA +
Preference number: 4 (lower is better)
Translates to: HQRCRCSRGSWALMYMTEGQLLL*GVSNRP
Trigger: TGGGCGGTTGGAGACCCCTCAGAGGAGCAGTTGGCC...CTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTTGCCGGGCTTCCTGGTaGTGTCCGGTCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQALPSTQRNPGPGSRKACRASW*CPVRSS
Trigger: GCTGGACCGGACCGGACAGCACCAGGAAGCCCGGCA...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGAGGGAGGGAAGAGGGGCTaGAGGCGTTGCCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: VHGAQTKRAGTSGAAAPEGGKRG*RRCPLP
Trigger: GGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC...CTCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CTGGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCCGGGGGTTGGGCCCTaGGGCTTCCTTCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LEVLLSRQLRAVVRGARGPGVGP*GFLPSP
Trigger: TGGACTGGGAAGGAAGCCCCAGGGCCCAACCCCCGG...CCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CCCATCACCGCGTCTGTCTCCCCATCTCTGGGAGGGCAGTCAGGAGGGACGTGGGCGGGCTGTTGTACGTaGTGCACGTGGGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PITASVSPSLGGQSGGTWAGCCT*CTWAWL
Trigger: GAGCCAAGCCCACGTGCACCACGTACAACAGCCCGC...CCACGTCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAGACGCGGTGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp GTGGCCACAGAGCTGGGAGAAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGCACCAGCGGTGCCGCTaGTCCCGAGGCAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: VATELGEAVSMELRRKEQHQRCR*SRGSWA
Trigger: CGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTG...CTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTCCCAGCTCTGTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTGGAGGGAAGAGGGGCTaGAGGCGTTGCCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAGGKRG*RRCPLP
Trigger: GGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGCCTCGGGAGCAGCCCTaGGCAAATGGCTGCACTGAC +
Preference number: 4 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLPREQP*ANGCTD
Trigger: GTCAGTGCAGCCATTTGCCCAGGGCTGCTCCCGAGG...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGCCACATGGGGGACCCTaGACACCCAGTCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLPHGGP*TPSPRS
Trigger: TGATCGAGGACTGGGTGTTCAGGGTCCCCCATGTGG...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp GTGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGGGGACTACCAGGCTGTaGCCCGTGCGGTACGCTATT +
Preference number: 4 (lower is better)
Translates to: VSMELRRKEQAPAVPLLPGTTRL*PVRYAI
Trigger: AATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCC...CGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR TCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCCTGAGTGAGGCCATATaGACCCCAGCGGGAGGAACC +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSLSEAI*TPAGGT
Trigger: GGTTCCTCCCGCTGGGGTTCATATGGCCTCACTCAG...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GGTCTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGCACCAGCGGTGCCGCTaGTCCCGAGGCAGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLQPPTPPSYQTGSSPEPHQRCR*SRGSWA
Trigger: CGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTG...CGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CGTTGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGGAAGCAGGCACCAGCGGTaGCGCTGCTCCCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RCSPCVCTQPCWGRWRTGSRHQR*RCSRGS
Trigger: GCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCT...TCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACAACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGGGCTGCAGGCGTTaGCCTCTACCCAGAGGAATC +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSRGCRR*PLPRGI
Trigger: GATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCT...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGAGAGGGGCTGCAGGCGTTaGCCTCTACCCAGAGGAATC +
Preference number: 4 (lower is better)
Translates to: VHGAQTKRAGTSGAAAPERGCRR*PLPRGI
Trigger: GATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCT...CTCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTGCCCACAGAGAGAGCTaGATCCCCCAGGCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAAHRES*IPQAPK
Trigger: CTTGGGAGCCTGGGGGATGCAGCTCTCTCTGTGGGC...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp AGCAGGCACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGTGGTGCACGTGGGCTTaGCTCTGCTGTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SRHQRCRCSRGSWALMYMWCTWA*LCCVLS
Trigger: GGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCA...CATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CTGGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGAACTGGAAGTTCTCCTaGGCCGACAGCTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: LEVLLSRQLRAVVRGARGNWKFS*ADSCGL
Trigger: CAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAGTT...CCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GTCCGGGACTTCCCGGAGCCCTTCGCTGTGGCGCGAATGCCCACTGATCTCCAGCAGGTGGGACATGGATaGTGTGAACTGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VRDFPEPFAVARMPTDLQQVGHG*CELLLG
Trigger: TCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTG...CTGGAGATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCGGGAAGTCCCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCGGTCCGCATCCAGGATaGTCTTGTTGCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGAAGVALYPEESRSWLGPHPG*SCCPWP
Trigger: TGGCCAAGGGCAACAAGAGCATCCTGGATGCGGACC...GAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGACCAGGGGGGACACGTTCTCACTaGGTCCCTTCGCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PGCSQNPCPGPLDAQGPGGTRSH*VPSPSL
Trigger: CAGGGAAGGCGAAGGGACCCAGTGAGAACGTGTCCC...CCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CTCCAGGAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTGCTCCCGAGGCAGCTaGGCGTTGATGTACATGACA +
Preference number: 4 (lower is better)
Translates to: LQEGSGGSSFIVRDFPEPCSRGS*ALMYMT
Trigger: TGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCA...GGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTCCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp GAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTTGTACGTGGTGCACGTaGGCTTGGCTCTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: EGSGGSSFIVRDFPEPFACTWCT*AWLCCV
Trigger: GACACAGCAGAGCCAAGCCCACGTGCACCACGTACA...AGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp GTGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGTGTACGTGGTGCACGTaGGCTTGGCTCTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: VSMELRRKEQAPAVPLLPCTWCT*AWLCCV
Trigger: GACACAGCAGAGCCAAGCCCACGTGCACCACGTACA...CGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCCGGAGCCCTTCGCTGTaGCGCGAATGCCCACTGATC +
Preference number: 4 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCRSPSL*RECPLI
Trigger: GATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCG...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp CGAACACATGCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGCGGAGCCCTTCGCTGTaGCGCGAATGCCCACTGATC +
Preference number: 4 (lower is better)
Translates to: RTHACHGPRGQPHRVPGERSPSL*RECPLI
Trigger: GATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCG...CTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp AGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTACACGTCATGGTTCCTaGACCGACGAGTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLRRLLIHRPGLPGALRCTRHGS*TDESRR
Trigger: CCTCCTGGACTCGTCGGTCCAGGAACCATGACGTGT...ACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR TCA 90 bp GGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCATCATACAGCCTGGTaGCCATCTCTGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GRGAAGVALYPEESRSWLHHTAW*PSLGEE
Trigger: CTCTTCCCCCAGAGATGGTCACCAGGCTGTATGATG...GAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CGAACACATGCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGCCACATGGGGGACCCTaGACACCCAGTCCTCGATCA +
Preference number: 4 (lower is better)
Translates to: RTHACHGPRGQPHRVPGEPHGGP*TPSPRS
Trigger: TGATCGAGGACTGGGTGTTCAGGGTCCCCCATGTGG...CTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp GTCGTTGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGAGGGTCCCCGGTGAGTaGTGTGGCCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VVVARVCVHSHAGADGEQRVPGE*CGHRAG
Trigger: CCCAGCTCTGTGGCCACATCACTCACCGGGGACCCT...CTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACAACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCTGGGAGATCCACCCATaGGTCAGGACATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSWEIHP*VRTWLQ
Trigger: CTGAAGCCATGTCCTGACTCATGGGTGGATCTCCCA...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
CDS-3UTR TCA 90 bp CTGGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGAGGCAACGGTGCACCTaGCACGTCATGGTTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LEVLLSRQLRAVVRGARGRQRCT*HVMVPG
Trigger: TCCAGGAACCATGACGTGTCAGGTGCACCGTTGCCT...CCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp TCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTATTACAGTTGCCGGGCTTCCTGGTaGTGTCCGGTCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SWHMWDYQAVTRAVRYYSCRASW*CPVRSS
Trigger: GCTGGACCGGACCGGACAGCACCAGGAAGCCCGGCA...ACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
CDS-3UTR GCA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACAGCAGGCACCAGCGGTaGCGCTGCTCCCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDSRHQR*RCSRGS
Trigger: GCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCT...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGCCCAGGATGCTCTTGTTaGCCTTGGCCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: VLLSRQLRAVVRGARGLGPGCSC*PWPTAP
Trigger: AGGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGG...GCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGCAAAGTCCTAACCTTTaGAGCGGCCTGGGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLQSPNL*SGLGRS
Trigger: GCTTCTGCCCAGGCCGCTGCAAAGGTTAGGACTTTG...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTCACTGGCCCCAGCCCTaGACACGCCCTAAAAAGGTT +
Preference number: 4 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAHWPQP*TRPKKV
Trigger: AACCTTTTTAGGGCGTGTGCAGGGCTGGGGCCAGTG...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGAGTGATGCCCAGGTGTaGACCAAGTCACAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLSDAQV*TKSQGG
Trigger: TCCTCCCTGTGACTTGGTGCACACCTGGGCATCACT...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCGCTGTGAACTGCTCCTaGGACACGTTCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: GRGAAGVALYPEESRSWLAVNCS*DTFSLG
Trigger: ACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGC...GAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp AGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGTGGTGCACGTGGGCTTaGCTCTGCTGTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSPEPTAAGCCTWCTWAWWCTWA*LCCVLS
Trigger: GGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCA...CCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CGAACACATGCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGGAGGAATCCAGGTCCTaGCTCCAGGAAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: RTHACHGPRGQPHRVPGEEESRS*LQEGSG
Trigger: GCCTGAGCCTTCCTGGAGCCAGGACCTGGATTCCTC...CTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp ATCATACAGCCTGGTGACCATCTCTGGGGGAAGAGCTTCCCCGACGTGGTTACAAGGGTCCCCGGTGAGTaGTGTGGCCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IIQPGDHLWGKSFPDVVTRVPGE*CGHRAG
Trigger: CCCAGCTCTGTGGCCACATCACTCACCGGGGACCCT...TGTAACCACGTCGGGGAAGCTCTTCCCCCAGAGATGGTCACCAGGCTGTATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp GAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTGCCGGGCTTCCTGGTaGTGTCCGGTCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: ETEASPPKSKRQTHRTHACRASW*CPVRSS
Trigger: GCTGGACCGGACCGGACAGCACCAGGAAGCCCGGCA...AGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGACCAGGGCAGGTGGGACATGGATaGTGTGAACTGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PGCSQNPCPGPLDAQGPGQVGHG*CELLLG
Trigger: TCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTG...CCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp TGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGACTGTGGCTTAGCACGTaGACCACAGAGCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: CPWSSDEKSRHQRCRCSRLWLST*TTEPTR
Trigger: TCTGGTTGGCTCTGTGGTGCACGTGCTAAGCCACAG...TCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAACCCACCGAACACATaGTTGTCATGGTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSNPPNT*LSWSSR
Trigger: CCTCGAGGACCATGACAAGCATGTGTTCGGTGGGTT...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCCCGTTCGGGATCGTCTaGTGTCCATGGTTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSPFGIV*CPWFKY
Trigger: GTACTTGAACCATGGACAGCAGACGATCCCGAACGG...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCTTGCCCTTGGCCAACTaGTCCTCTGAGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCLPLAN*SSEGSP
Trigger: TGGAGACCCCTCAGAGGAGCAGTTGGCCAAGGGCAA...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTCCAGGATGCTCTTGTTaGCCTTGGCCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAPGCSC*PWPTAP
Trigger: AGGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGG...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp AGCTGGGAGAAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTCGCTGTGGCGCGAATaGCCACTGATCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SWEKLCPWSSDEKSRHQRSLWRE*PLISSR
Trigger: CCTGCTGGAGATCAGTGGGCATTCGCGCCACAGCGA...CCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCCCAGGCTGTGACCCGTaGGGTACGCTATTACAGTTA +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSPGCDP*GTLLQL
Trigger: TAACTGTAATAGCGTACCGCACGGGTCACAGCCTGG...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
CDS-3UTR GCA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCTCTGCATCACGCTCCTaGCCCTCCACACACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCSASRS*PSTHCL
Trigger: CAGACAGTGTGTGGAGGGGCAGGAGCGTGATGCAGA...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp CTGGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTCAGCTCCTGTCTGTaGCTTAGCACGTGCACCACA +
Preference number: 4 (lower is better)
Translates to: LEVLLSRQLRAVVRGARGLSSCL*LSTCTT
Trigger: TGTGGTGCACGTGCTAAGCCACAGACAGGAGCTGAG...CCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp TGGGCCTCAGGGTCCGCATCCAGGATGCTCTTGTTGCCCTTGGCCAACTGCTCCTGCTCCCGAGGCAGCTaGGCGTTGATGTACATGACA +
Preference number: 4 (lower is better)
Translates to: WASGSASRMLLLPLANCSCSRGS*ALMYMT
Trigger: TGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCA...GGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGGATGCGGACCCTGAGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CAGACCCATCACCGCGTCTGTCTCCCCATCTCTGGGAGGGCAGTCAGGAGGGACTGTACACAGCCATGCTaGGGCAGATGGAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: QTHHRVCLPISGRAVRRDCTQPC*GRWRTG
Trigger: TCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACA...GTCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAGACGCGGTGATGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp TGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCTGCTCCCGATGCTCTTGTTGCCCTTaGCCAACTGCTCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CPWSSDEKSRHQRCRCSRCSCCP*PTAPLR
Trigger: CCTCAGAGGAGCAGTTGGCCAAGGGCAACAAGAGCA...TCGGGAGCAGCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp ATGGTTCCTGGACCGACGAGTCCAGGAGGGCAGACCCATCACCGCGTCTGTCTCTGCTCTTGTTGCCCTTaGCCAACTGCTCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: MVPGPTSPGGQTHHRVCLCSCCP*PTAPLR
Trigger: CCTCAGAGGAGCAGTTGGCCAAGGGCAACAAGAGCA...GAGACAGACGCGGTGATGGGTCTGCCCTCCTGGACTCGTCGGTCCAGGAACCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp AGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTGCCACCTACATGGCCTaGGAACAGTTATCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RLRRLLIHRPGLPGALRCATYMA*EQLSAH
Trigger: GTGAGCTGATAACTGTTCCCAGGCCATGTAGGTGGC...ACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR CAA 72 bp CCCATGAGTCAGGACATGGCTTCAGAGGGCGTCTTCTaGGCACATGTGGGACTACCAGGCTGTGACCCGTGC +
Preference number: 4 (lower is better)
Translates to: PMSQDMASEGVF*AHVGLPGCDPC
Trigger: GCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTGAAGCCATGTCCTGACTCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
CDS-3UTR TCA 90 bp AGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGCTCAGGAAGAAACTGTaGACAAAAGCTCCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: SSPEPTAAGCCTWCTWAWLRKKL*TKAPPH
Trigger: GTGGGGCGGAGCTTTTGTTCACAGTTTCTTCCTGAG...CCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp GACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACTCAGGCCAACTGCTCCTCTaGGGGGTCTCCAACCGCCCA +
Preference number: 4 (lower is better)
Translates to: DKLTAPLSGEISWPTGDSGQLLL*GVSNRP
Trigger: TGGGCGGTTGGAGACCCCTCAGAGGAGCAGTTGGCC...TGAGTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp AAGCCCTTGCAAATGACCACACTCAGGAATATGGCCACATGGGGGACCCTGAACGGCCAACTGCTCCTCTaGGGGGTCTCCAACCGCCCA +
Preference number: 4 (lower is better)
Translates to: KPLQMTTLRNMATWGTLNGQLLL*GVSNRP
Trigger: TGGGCGGTTGGAGACCCCTCAGAGGAGCAGTTGGCC...GTTCAGGGTCCCCCATGTGGCCATATTCCTGAGTGTGGTCATTTGCAAGGGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGGGGACTACCAGGCTGTaGCCCGTGCGGTACGCTATT +
Preference number: 4 (lower is better)
Translates to: PVRYAITVKPCGREEGLQGTTRL*PVRYAI
Trigger: AATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCC...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
CDS-3UTR TCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCGTCAGTCTACACTGCTaGATTTCCCATCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSVSLHC*ISHHPP
Trigger: AGGGGGATGATGGGAAATTCAGCAGTGTAGACTGAC...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCATGGATGCTGTGAACTaGTCCTGGGACACGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GRGAAGVALYPEESRSWLMDAVN*SWDTFS
Trigger: TGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCAT...GAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGCTCTGCTGTGTCCTTTCCGTGTGTACACAGCCATaGTGGGGCAGATGGAGAACA +
Preference number: 4 (lower is better)
Translates to: AAGCCTWCTWAWLCCVLSVCTQP*WGRWRT
Trigger: TGTTCTCCATCTGCCCCAGCATGGCTGTGTACACAC...GGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CGTTGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGGAGGCTGTTGTACGTGGTaGACGTGGGCTTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RCSPCVCTQPCWGRWRTGGCCTW*TWAWLC
Trigger: GCAGAGCCAAGCCCACGTGCACCACGTACAACAGCC...TCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp TGGCCACAGAGCTGGGAGAAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGGTCAGCTCACTGTCCCTaGCGGGCTTCCTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: WPQSWEKLCPWSSDEKSRSAHCP*RASWCC
Trigger: ACAGCACCAGGAAGCCCGGCAGGGACAGTGAGCTGA...CCTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTCCCAGCTCTGTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR GCA 90 bp GGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGGGAGATTCCAACTaGCTCATCTGGACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GSSPEPTAAGCCTWCTWAWGDSN*LIWTGF
Trigger: GAAGCCTGTCCAGATGAGGCAGTTGGAATCTCCCCA...AGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR CCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGGCGGGCTGTTGTACGTaGTGCACGTGGGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: RFECPEAEPCTKRSPQREAGCCT*CTWAWL
Trigger: GAGCCAAGCCCACGTGCACCACGTACAACAGCCCGC...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp TCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTATTACAGTGCGGGCTGTTGTACGTaGTGCACGTGGGCTTGGCTC +
Preference number: 4 (lower is better)
Translates to: SWHMWDYQAVTRAVRYYSAGCCT*CTWAWL
Trigger: GAGCCAAGCCCACGTGCACCACGTACAACAGCCCGC...ACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
CDS-3UTR CCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGCAAGAGGGAGGCAGGTaGGTGGTTACGGACCTCCCT +
Preference number: 4 (lower is better)
Translates to: PVRYAITVKPCGREEGLQQEGGR*VVTDLP
Trigger: AGGGAGGTCCGTAACCACCCACCTGCCTCCCTCTTG...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp CGAACACATGCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGCAGTCAGGAGGGACGTaGTTCAAGAGACACACGAGG +
Preference number: 4 (lower is better)
Translates to: RTHACHGPRGQPHRVPGEQSGGT*FKRHTR
Trigger: CCTCGTGTGTCTCTTGAACCACGTCCCTCCTGACTG...CTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR TCA 90 bp CAGTCCAGCCTCTCAGCTCCTGTCTGTGGCTTAGCACGTGCACCACAGAGCCAACATCATACAGCCTGGTaGCCATCTCTGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: QSSLSAPVCGLARAPQSQHHTAW*PSLGEE
Trigger: CTCTTCCCCCAGAGATGGTCACCAGGCTGTATGATG...TTGGCTCTGTGGTGCACGTGCTAAGCCACAGACAGGAGCTGAGAGGCTGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR TCA 90 bp TGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGGAAGCGGGACATGGATGCTGTaGACTGCTCCTGGGACACGT +
Preference number: 4 (lower is better)
Translates to: CSPCVCTQPCWGRWRTGSGTWML*TAPGTR
Trigger: ACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCC...GCTTCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp TGGCCACAGAGCTGGGAGAAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGGGGGACATGGATGCTGTaGACTGCTCCTGGGACACGT +
Preference number: 4 (lower is better)
Translates to: WPQSWEKLCPWSSDEKSRGTWML*TAPGTR
Trigger: ACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCC...CCTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTCCCAGCTCTGTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGACACTGCCCTGGTCCACTTaGCGCTCAGGGACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: LQPPTPPSYQTGSSPEPTLPWST*RSGTRV
Trigger: TACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAG...TGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CGTGGTTACATTCTAGAGGCAACGGTGCACCTGACACGTCATGGTTCCTGGACCAACTGGAAGTTCTCCTaGGCCGACAGCTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: RGYILEATVHLTRHGSWTNWKFS*ADSCGL
Trigger: CAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAGTT...GGTCCAGGAACCATGACGTGTCAGGTGCACCGTTGCCTCTAGAATGTAACCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR TCA 90 bp GGACATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGATGGGAGATCCACCCATaGGTCAGGACATGGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GHPGCSQNPCPGPLDAQGWEIHP*VRTWLQ
Trigger: CTGAAGCCATGTCCTGACTCATGGGTGGATCTCCCA...TCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR TCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGAAGCAGGTGCATTCGTaGTCTGCACTCTCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLKQVHS*SALSLE
Trigger: TTCTAAGGAGAGTGCAGATCACGAATGCACCTGCTT...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp ACTGCTGAATTTCCCATCATCCCCCTCGGGAGCAGCCCTGGGCAAATGGCTGCACCTTCCAGGCCTAAATaGTCCTCACACCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TAEFPIIPLGSSPGQMAAPSRPK*SSHLSL
Trigger: GAGGCTGAGGTGTGAGGATCATTTAGGCCTGGAAGG...TGCAGCCATTTGCCCAGGGCTGCTCCCGAGGGGGATGATGGGAAATTCAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGTCGCTGTGGCGCGAATaGCCACTGATCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RFECPEAEPCTKRSPQRESLWRE*PLISSR
Trigger: CCTGCTGGAGATCAGTGGGCATTCGCGCCACAGCGA...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GTACATGTAGTGGTCGTTGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCATCGCTGTGGCGCGAATaGCCACTGATCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VHVVVVVARVCVHSHAGASLWRE*PLISSR
Trigger: CCTGCTGGAGATCAGTGGGCATTCGCGCCACAGCGA...TGCCCCAGCATGGCTGTGTACACACACACGGGCTACAACGACCACTACATGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp ATCATACAGCCTGGTGACCATCTCTGGGGGAAGAGCTTCCCCGACGTGGTTACAAGGGGCTGCAGGCGTTaGCCTCTACCCAGAGGAATC +
Preference number: 4 (lower is better)
Translates to: IIQPGDHLWGKSFPDVVTRGCRR*PLPRGI
Trigger: GATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCT...TGTAACCACGTCGGGGAAGCTCTTCCCCCAGAGATGGTCACCAGGCTGTATGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGGTGCATTCGTGATCTaGACTCTCCTTAGAACAAGC +
Preference number: 4 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLGAFVI*TLLRTS
Trigger: GCTTGTTCTAAGGAGAGTGCAGATCACGAATGCACC...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GGACATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGACTCAGCTCCTGTCTGTaGCTTAGCACGTGCACCACA +
Preference number: 4 (lower is better)
Translates to: GHPGCSQNPCPGPLDAQGLSSCL*LSTCTT
Trigger: TGTGGTGCACGTGCTAAGCCACAGACAGGAGCTGAG...TCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp GCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTCCGGGGGTTGGGCCCTaGGGCTTCCTTCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: AWLCCVLSQNQHPPKAQSPGVGP*GFLPSP
Trigger: TGGACTGGGAAGGAAGCCCCAGGGCCCAACCCCCGG...ACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGAGTGGGGAGATCTCATaGCCAACCGGTGACTCACCG +
Preference number: 4 (lower is better)
Translates to: PVRYAITVKPCGREEGLQSGEIS*PTGDSP
Trigger: CGGTGAGTCACCGGTTGGCCATGAGATCTCCCCACT...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGAACAAGCTCAGGGTaGAAAGCATGTGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSRTSSG*KACEWT
Trigger: TGTCCACTCACATGCTTTCCACCCTGAGCTTGTTCT...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGAGCATCCATATGGTaGGACATCACGCAGTCCATA +
Preference number: 4 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSRASIW*DITQSI
Trigger: TATGGACTGCGTGATGTCCCACCATATGGATGCTCT...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CAA 72 bp GGGAGATCTCATGGCCAACCGGTGACTCACCGTGTGTaGTTTTCCAGACGTGGGCAGATGGCAGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRSHGQPVTHRV*FSRRGQMAALL
Trigger: CAGCAGAGCTGCCATCTGCCCACGTCTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGATCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
3UTR CAA 72 bp TCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTaGTCATGGTCCTCGAGGACAGCCACACAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: SQEQEANPPNTC*SWSSRTATQGP
Trigger: GGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGCATCATACAGCCTGGTaGCCATCTCTGGGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PVRYAITVKPCGREEGLQHHTAW*PSLGEE
Trigger: CTCTTCCCCCAGAGATGGTCACCAGGCTGTATGATG...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CCTGGGCCTCAGGGTCCGCATCCAGGATGCTCTTGTTGCCCTTGGCCAACTGCTGAAAGCCCTTGCAAATaGCCACACTCAGGAATATGG +
Preference number: 4 (lower is better)
Translates to: PGPQGPHPGCSCCPWPTAESPCK*PHSGIW
Trigger: CCATATTCCTGAGTGTGGTCATTTGCAAGGGCTTTC...AGCAGTTGGCCAAGGGCAACAAGAGCATCCTGGATGCGGACCCTGAGGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGACATGCGAAGGGGCAGCTTaGGCCTGGGCAAGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LQPPTPPSYQTGSSPEPTCEGAA*AWARSS
Trigger: GGAACTTCTTGCCCAGGCTCAAGCTGCCCCTTCGCA...TGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR GCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGTGCTCTCAAAACCCCTaGCCTGGTCCACTTGACGCT +
Preference number: 4 (lower is better)
Translates to: PVRYAITVKPCGREEGLQCSQNP*PGPLDA
Trigger: AGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCA...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CAGGTGGGACATGGATGCTGTGAACTGCTCCTGGGACACGTTCTCACTGGGTCCCCGTTCGGGATCGTCTaGTGTCCATGGTTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: QVGHGCCELLLGHVLTGSPFGIV*CPWFKY
Trigger: GTACTTGAACCATGGACAGCAGACGATCCCGAACGG...GGACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCACGTGGGCTTGGCTCTaGTGTGTCCTTTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCTWAWL*CVLSQN
Trigger: ATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGT...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp CTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGACAGGCTGTTGTACGTGGTaGACGTGGGCTTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LQPPTPPSYQTGSSPEPTGCCTW*TWAWLC
Trigger: GCAGAGCCAAGCCCACGTGCACCACGTACAACAGCC...TGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GCAAATGACCACACTCAGGAATATGGCCACATGGGGGACCCTGAACACCCAGTCTTGCCCTTGGCCAACTaGTCCTCTGAGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ANDHTQEYGHMGDPEHPVLPLAN*SSEGSP
Trigger: TGGAGACCCCTCAGAGGAGCAGTTGGCCAAGGGCAA...GACTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCTGAGTGTGGTCATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTGGAGGGAAGAGGGGCTaGAGGCGTTGCCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: AWLCCVLSQNQHPPKAQSGGKRG*RRCPLP
Trigger: GGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC...ACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp GTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGCTTTCCTTTCAACAGGTaGGACATGGATGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: VLLSRQLRAVVRGARGLGFPFNR*DMDAVN
Trigger: GTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAA...GCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp GGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCTCCTCTGTAAACTTTTaGACTTCTCTGGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: GRGAAGVALYPEESRSWLSSVNF*TSLAFT
Trigger: CGTGAAGGCCAGAGAAGTCCAAAAGTTTACAGAGGA...GAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp AGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCTGCATCCTCAGCTCCTGTCTGTaGCTTAGCACGTGCACCACA +
Preference number: 4 (lower is better)
Translates to: SVQRQNRAPREAHRESCILSSCL*LSTCTT
Trigger: TGTGGTGCACGTGCTAAGCCACAGACAGGAGCTGAG...GATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GAGAAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGGCACCAGCGGTGCCGCAACACATGCTTGTCATaGTCCTCGAGGACAGCCACA +
Preference number: 4 (lower is better)
Translates to: EKLCPWSSDEKSRHQRCRNTCLS*SSRTAT
Trigger: TGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTT...GCGGCACCGCTGGTGCCTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp TCCTCGGAGTTTCCTTTCAACAGGTGGGACATGGATGCTGTGAACTGCTCCTGGGAGGAATCCAGGTCCTaGCTCCAGGAAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSEFPFNRWDMDAVNCSWEESRS*LQEGSG
Trigger: GCCTGAGCCTTCCTGGAGCCAGGACCTGGATTCCTC...CCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAACTCCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp GGACATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGATCTTCTTGGCACATGTaGGACTACCAGGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: GHPGCSQNPCPGPLDAQGSSWHM*DYQAVT
Trigger: GGTCACAGCCTGGTAGTCCCACATGTGCCAAGAAGA...TCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR CCA 90 bp CATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGACCATGCTGGCCACCTACATaGCCTGGGAACAGTTATCAG +
Preference number: 4 (lower is better)
Translates to: HPGCSQNPCPGPLDAQGPCWPPT*PGNSYQ
Trigger: CTGATAACTGTTCCCAGGCCATGTAGGTGGCCAGCA...TGGTCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR CAA 72 bp GACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTaGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCC +
Preference number: 4 (lower is better)
Translates to: DSCGLLYVVHVG*ALLCPFPKSTS
Trigger: GGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGGGTCCCCGGTGAGTaGTGTGGCCACAGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSRVPGE*CGHRAG
Trigger: CCCAGCTCTGTGGCCACATCACTCACCGGGGACCCT...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp GACCTTTCTCTAAGTGCACTGCCTGGAAGCAGGTGCATTCGTGATCTGCACTCTCAGGGATGGCCTGAGTaGGGCCATATGAACCCCAGC +
Preference number: 4 (lower is better)
Translates to: DLSLSALPGSRCIRDLHSQGWPE*GHMNPS
Trigger: GCTGGGGTTCATATGGCCTCACTCAGGCCATCCCTG...AGAGTGCAGATCACGAATGCACCTGCTTCCAGGCAGTGCACTTAGAGAAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGCTCATGGCCAACCGGTaGCTCACCGTGTGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: PVRYAITVKPCGREEGLQLMANR*LTVCCF
Trigger: AAAACAACACACGGTGAGTCACCGGTTGGCCATGAG...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp CGTGGTTACATTCTAGAGGCAACGGTGCACCTGACACGTCATGGTTCCTGGACCTGCTCTCAAAACCCCTaGCCTGGTCCACTTGACGCT +
Preference number: 4 (lower is better)
Translates to: RGYILEATVHLTRHGSWTCSQNP*PGPLDA
Trigger: AGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCA...GGTCCAGGAACCATGACGTGTCAGGTGCACCGTTGCCTCTAGAATGTAACCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp CTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGACATTGCCCTTGGCCAACTaGTCCTCTGAGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LQPPTPPSYQTGSSPEPTLPLAN*SSEGSP
Trigger: TGGAGACCCCTCAGAGGAGCAGTTGGCCAAGGGCAA...TGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACGGTCCGCATCCAGGATaGTCTTGTTGCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDGPHPG*SCCPWP
Trigger: TGGCCAAGGGCAACAAGAGCATCCTGGATGCGGACC...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCAAAATGTTCCCCAGCTaGAGACGGTGGAACGCTAGG +
Preference number: 4 (lower is better)
Translates to: IASFSEPGKVLSGPLAPAKMFPS*RRWNAR
Trigger: CCTAGCGTTCCACCGTCTGCAGCTGGGGAACATTTT...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCTCCTGCCGGGCTTCCTaGTGCTGTCCGGTCCGGTCC +
Preference number: 4 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLSCRAS*CCPVRS
Trigger: GGACCGGACCGGACAGCACCAGGAAGCCCGGCAGGA...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp CTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGAAAATGCAAGGCCTGCCCGGGGGTTGGGCCCTaGGGCTTCCTTCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLLSGRFDEPPSRKCKACPGVGP*GFLPSP
Trigger: TGGACTGGGAAGGAAGCCCCAGGGCCCAACCCCCGG...GCAGGCCTTGCATTTTCTACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp TGTAGCCCGTGTGTGTGTACACAGCCATGCTGGGGCAGATGGAGAACAGGAAGCATTCTCCCCACAAGCTaGGGAGATTCCAACTGCCTC +
Preference number: 4 (lower is better)
Translates to: CSPCVCTQPCWGRWRTGSILPTS*GDSNCL
Trigger: GAGGCAGTTGGAATCTCCCCAGCTTGTGGGGAGAAT...GCTTCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACACACACACGGGCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
3UTR CAA 72 bp ATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTaGACGCTCAGGGACCAGGGTAGTCAGATCAAGAGA +
Preference number: 4 (lower is better)
Translates to: IQDALKTPALVH*TLRDQGSQIKR
Trigger: TCTCTTGATCTGACTACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp GGTCTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGCTCAGGAAGAAACTGTaGACAAAAGCTCCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: GLQPPTPPSYQTGSSPEPLRKKL*TKAPPH
Trigger: GTGGGGCGGAGCTTTTGTTCACAGTTTCTTCCTGAG...CGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CCTGCCCTGGTCCACTTGACGCTCAGGGACCAGGGTAGTCAGATCAAGAGACGAGAAAGCCCTTGCAAATaGCCACACTCAGGAATATGG +
Preference number: 4 (lower is better)
Translates to: PALVHLTLRDQGSQIKRRESPCK*PHSGIW
Trigger: CCATATTCCTGAGTGTGGTCATTTGCAAGGGCTTTC...TCGTCTCTTGATCTGACTACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTCTGCCCTGGTCCACTTaGCGCTCAGGGACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASLPWST*RSGTRV
Trigger: TACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAG...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp AGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCTGCATCATGAGGCATTCTGCCTaGGTCAGGGCTATTGCTAAG +
Preference number: 4 (lower is better)
Translates to: SVQRQNRAPREAHRESCIMRHSA*VRAIAK
Trigger: CTTAGCAATAGCCCTGACTCAGGCAGAATGCCTCAT...GATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp CTGGGTGTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGAACTTCCGACCTCAGGTaGTCCGCCTACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: LGVEPYYKYLLRTHATTRTSDLR*SAYLGL
Trigger: GAGGCCGAGGTAGGCGGATCACCTGAGGTCGGAAGT...TCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCACACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp AGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCTGCATCGGGAGGAGACCTGAGTaGTTTTTGCATCAGTGCCTT +
Preference number: 4 (lower is better)
Translates to: SVQRQNRAPREAHRESCIGRRPE*FLHQCL
Trigger: AAGGCACTGATGCAAAAATCACTCAGGTCTCCTCCC...GATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp TCCATGGTTCAAGTACATGTAGTGGTCGTTGTAGCCCGTGTGTGTGTACACAGCGCCCCACACGGCTTCTaGTGTTCCCCATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SMVQVHVVVVVARVCVHSAPHGF*CSPSVL
Trigger: CAGGACAGATGGGGAACAGCAGAAGCCGTGTGGGGC...GCTGTGTACACACACACGGGCTACAACGACCACTACATGTACTTGAACCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp ACTGCTGAATTTCCCATCATCCCCCTCGGGAGCAGCCCTGGGCAAATGGCTGCAAGTCTCTTGCCATCTTaGAGCTTCATGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TAEFPIIPLGSSPGQMAASLLPS*SFMSES
Trigger: GCTCTCTGACATGAAGCTGCAAGATGGCAAGAGACT...TGCAGCCATTTGCCCAGGGCTGCTCCCGAGGGGGATGATGGGAAATTCAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGAGAGGACATCCAGGATaGTCTCAAAACCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RFECPEAEPCTKRSPQRERGHPG*SQNPCP
Trigger: AGGGCAGGGGTTTTGAGAGCATCCTGGATGTCCTCT...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GCAAATGACCACACTCAGGAATATGGCCACATGGGGGACCCTGAACACCCAGTCAACCCACCGAACACATaGTTGTCATGGTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ANDHTQEYGHMGDPEHPVNPPNT*LSWSSR
Trigger: CCTCGAGGACCATGACAAGCATGTGTTCGGTGGGTT...GACTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCTGAGTGTGGTCATTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GTGGCCACAGAGCTGGGAGAAGCTGTGTCCATGGAGCTCAGACGAAAAGAGCAGACGTGGGCTTGGCTCTaGTGTGTCCTTTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: VATELGEAVSMELRRKEQTWAWL*CVLSQN
Trigger: ATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGT...CTGCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTCCCAGCTCTGTGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTTACCTCAAAGTCTCCTaGCTCCATTTCCCCATTTTA +
Preference number: 4 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAYLKVS*LHFPIL
Trigger: TAAAATGGGGAAATGGAGGCAGGAGACTTTGAGGTA...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGAGAGAACCACAACTTTaGTTCTCTGTAGACAGATCT +
Preference number: 4 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLREPQL*FSVDRS
Trigger: AGATCTGTCTACAGAGAAGCAAAGTTGTGGTTCTCT...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GACCTTTCTCTAAGTGCACTGCCTGGAAGCAGGTGCATTCGTGATCTGCACTCTCCAGAGGCAGAACCGTaGACCAAGAGAAGCCCACAG +
Preference number: 4 (lower is better)
Translates to: DLSLSALPGSRCIRDLHSPEAEP*TKRSPQ
Trigger: CTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGG...AGAGTGCAGATCACGAATGCACCTGCTTCCAGGCAGTGCACTTAGAGAAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GGTCTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGGGCCCCAGAAGTCTTTaGCTTGCAGCTTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: GLQPPTPPSYQTGSSPEPGPRSL*LAASCQ
Trigger: CTGACATGAAGCTGCAAGGCAAAGACTTCTGGGGCC...CGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR CCA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACTGCTCCCGAGGCAGCTaGGCGTTGATGTACATGACA +
Preference number: 4 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDCSRGS*ALMYMT
Trigger: TGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCA...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCAACACATGCTTGTCATaGTCCTCGAGGACAGCCACA +
Preference number: 4 (lower is better)
Translates to: IASFSEPGKVLSGPLAPANTCLS*SSRTAT
Trigger: TGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTT...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp TCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTATTACAGTTCTTCTTGGCACATGTaGGACTACCAGGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: SWHMWDYQAVTRAVRYYSSSWHM*DYQAVT
Trigger: GGTCACAGCCTGGTAGTCCCACATGTGCCAAGAAGA...ACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
CDS-3UTR CCA 90 bp AGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCTGCATCCACAGCACCTTTAAGTaGGGAGATCTCATGGCCAAC +
Preference number: 4 (lower is better)
Translates to: SVQRQNRAPREAHRESCIHSTFK*GDLMAN
Trigger: GTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTG...GATGCAGCTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTTACTGTCAGGTCCACTaGCCCCAGCCCTGCACACGC +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSYCQVH*PQPCTR
Trigger: GCGTGTGCAGGGCTGGGGCCAGTGGACCTGACAGTA...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACCCGAGAGCATCCATATaGTGGGACATCACGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDPRASI*WDITQS
Trigger: GGACTGCGTGATGTCCCACCATATGGATGCTCTCGG...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCCCCAGCTGCAGACGGTaGAACGCTAGGCCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLPSCRR*NARPES
Trigger: GCTCTCGGGCCTAGCGTTCCACCGTCTGCAGCTGGG...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GGTCTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGTCCAACTGCCTCATCTaGACAGGCTTCGAAGTCCTG +
Preference number: 4 (lower is better)
Translates to: GLQPPTPPSYQTGSSPEPSNCLI*TGFEVL
Trigger: CAGGACTTCGAAGCCTGTCCAGATGAGGCAGTTGGA...CGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR TCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAACTGGAAGTTCTCCTaGGCCGACAGCTGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSNWKFS*ADSCGL
Trigger: CAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAGTT...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTGCCCCACACGGCTTCTaGTGTTCCCCATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSAPHGF*CSPSVL
Trigger: CAGGACAGATGGGGAACAGCAGAAGCCGTGTGGGGC...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp CTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGGAAGGCTCAATTGATCAATCTCTaGCTGTTCCTCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LQALPSTQRNPGPGSRKAQLINL*LFLRKK
Trigger: TTTCTTCCTGAGGAACAGGCAGAGATTGATCAATTG...AGCCTTCCTGGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGATGGATGCTGTGAACTaGTCCTGGGACACGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RFECPEAEPCTKRSPQREMDAVN*SWDTFS
Trigger: TGAGAACGTGTCCCAGGAGCAGTTCACAGCATCCAT...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACGTGTGTACACAGCCATaGTGGGGCAGATGGAGAACA +
Preference number: 4 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDVCTQP*WGRWRT
Trigger: TGTTCTCCATCTGCCCCAGCATGGCTGTGTACACAC...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp AGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTGTCATGGTGTGTACACAGCCATaGTGGGGCAGATGGAGAACA +
Preference number: 4 (lower is better)
Translates to: RLHLPRARGKPTEHMLVMVCTQP*WGRWRT
Trigger: TGTTCTCCATCTGCCCCAGCATGGCTGTGTACACAC...CATGACAAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACTCACCGTTCGGGATCGTCTaGTGTCCATGGTTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: DKLTAPLSGEISWPTGDSPFGIV*CPWFKY
Trigger: GTACTTGAACCATGGACAGCAGACGATCCCGAACGG...TGAGTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTGGCTGTTGTACGTGGTaGACGTGGGCTTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASGCCTW*TWAWLC
Trigger: GCAGAGCCAAGCCCACGTGCACCACGTACAACAGCC...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ATCTGTTGTCCCCTTGAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCCAGGATGCTCTTGTTaGCCTTGGCCAACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: ICCPLETEASPPKSKRQTPGCSC*PWPTAP
Trigger: AGGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGG...GGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTCAAGGGGACAACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGAGATTTTCATCCAGATaGCTCTGTCCCTCACCCGTC +
Preference number: 4 (lower is better)
Translates to: RFECPEAEPCTKRSPQRERFSSR*LCPSPV
Trigger: GACGGGTGAGGGACAGAGGCATCTGGATGAAAATCT...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGCCTTCTGAGGACTCATaGCACCACCAGACCATGTTA +
Preference number: 4 (lower is better)
Translates to: RFECPEAEPCTKRSPQREPSEDS*HHQTML
Trigger: TAACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGG...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGTTCCCAAACTTAGGGTaGCCAATGTCCCTCACCTTG +
Preference number: 4 (lower is better)
Translates to: RFECPEAEPCTKRSPQREFPNLG*PMSLTL
Trigger: CAAGGTGAGGGACATTGGGCACCCTAAGTTTGGGAA...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGGAGAAGCTGTGTCCATaGAGCTCAGACGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RFECPEAEPCTKRSPQREEKLCP*SSDEKS
Trigger: GCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTC...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTGAGGAATCCAGGTCCTaGCTCCAGGAAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSEESRS*LQEGSG
Trigger: GCCTGAGCCTTCCTGGAGCCAGGACCTGGATTCCTC...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATCTGTTGTCCCCTTGAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCAGAGGGCGTCTTCTTaGCACATGTGGGACTACCAG +
Preference number: 4 (lower is better)
Translates to: ICCPLETEASPPKSKRQTQRASS*HMWDYQ
Trigger: CTGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTG...GGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTCAAGGGGACAACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR CCA 90 bp GAGATCTCATGGCCAACCGGTGACTCACCGTGTGTTGTTTTCCAGACGTGGGCAGAACTCCCATGCCATTaGAAGCTGTTCCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: EISWPTGDSPCVVFQTWAELPCH*KLFPES
Trigger: GCTTTCTGGGAACAGCTTCCAATGGCATGGGAGTTC...TGCCCACGTCTGGAAAACAACACACGGTGAGTCACCGGTTGGCCATGAGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGCTCGATTTACTATaGCTTATAATCAAGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GRGAAGVALYPEESRSWLQLDLL*LIIKAN
Trigger: GTTTGCCTTGATTATAAGCCATAGTAAATCGAGCTG...GAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCAACCTCTGCCTCCCTaGTTCAAGCAATTCTACTAC +
Preference number: 4 (lower is better)
Translates to: IASFSEPGKVLSGPLAPAQPLPP*FKQFYY
Trigger: GTAGTAGAATTGCTTGAACCAGGGAGGCAGAGGTTG...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATCATGAGACTCTTCTCCTCGGAGTTTCCTTTCAACAGGTGGGACATGGATGCTCTGTCTCCCCATCTCTaGGAGGGCAGTCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: IMRLFSSEFPFNRWDMDALSPHL*EGSQEG
Trigger: TCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAG...AGCATCCATGTCCCACCTGTTGAAAGGAAACTCCGAGGAGAAGAGTCTCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR TCA 90 bp CATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGACCAAGAGCATCAAACAATTaGTCAATCTCTGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: HPGCSQNPCPGPLDAQGPRASNN*SISACS
Trigger: GGAACAGGCAGAGATTGATCAATTGTTTGATGCTCT...TGGTCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTAGATGGCAGCTCTGCTaGCCCCACAACCCACCTACA +
Preference number: 4 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASRWQLC*PHNPPT
Trigger: TGTAGGTGGGTTGTGGGGTCAGCAGAGCTGCCATCT...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTCCAAGCCCGGGCCAGTaGCCTTTCTCTAAGTGCACT +
Preference number: 4 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASPSPGQ*PFSKCT
Trigger: AGTGCACTTAGAGAAAGGTCACTGGCCCGGGCTTGG...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCAGAAAATGCAAGGCCTaGAAAAATGCGAACAGCTCG +
Preference number: 4 (lower is better)
Translates to: IASFSEPGKVLSGPLAPARKCKA*KNANSS
Trigger: CGAGCTGTTCGCATTTTTGCAGGCCTTGCATTTTCT...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCGACCTGAGTGATTTTTaGATCAGTGCCTTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: IASFSEPGKVLSGPLAPADLSDF*ISAFAC
Trigger: ACAGGCAAAGGCACTGATGCAAAAATCACTCAGGTC...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGACCATGTGGGACACGTTCTCACTaGGTCCCTTCGCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: VEPYYKYLLRTHATTRPCGTRSH*VPSPSL
Trigger: CAGGGAAGGCGAAGGGACCCAGTGAGAACGTGTCCC...ACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp AACTTTTGGACTTCTCTGGCCTTCACGGGACCTTCTGTGGCAGAAATCATTTTCGGGACACGTTCTCACTaGGTCCCTTCGCCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: NFWTSLAFTGPSVAEIIFGTRSH*VPSPSL
Trigger: CAGGGAAGGCGAAGGGACCCAGTGAGAACGTGTCCC...GAAAATGATTTCTGCCACAGAAGGTCCCGTGAAGGCCAGAGAAGTCCAAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCTTTCCTTTCAACAGGTaGGACATGGATGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: IASFSEPGKVLSGPLAPAFPFNR*DMDAVN
Trigger: GTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAA...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATCTGTTGTCCCCTTGAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCTGTACACAGCCATGCTaGGGCAGATGGAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: ICCPLETEASPPKSKRQTCTQPC*GRWRTG
Trigger: TCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACA...GGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTCAAGGGGACAACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp TTTCATAATCATGAGACTCTTCTCCTCGGAGTTTCCTTTCAACAGGTGGGACATCTGCCCTGGTCCACTTaGCGCTCAGGGACCAGGGTA +
Preference number: 4 (lower is better)
Translates to: FHNHETLLLGVSFQQVGHLPWST*RSGTRV
Trigger: TACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAG...ATGTCCCACCTGTTGAAAGGAAACTCCGAGGAGAAGAGTCTCATGATTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp GGACATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGACAATTGATCAATCTCTaGCTGTTCCTCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GHPGCSQNPCPGPLDAQGQLINL*LFLRKK
Trigger: TTTCTTCCTGAGGAACAGGCAGAGATTGATCAATTG...TCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTCTGTGGCTTAGCACGTaGACCACAGAGCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSLWLST*TTEPTR
Trigger: TCTGGTTGGCTCTGTGGTGCACGTGCTAAGCCACAG...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp TCCTCGGAGTTTCCTTTCAACAGGTGGGACATGGATGCTGTGAACTGCTCCTGGAGTCTCTTGCCATCTTaGAGCTTCATGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SSEFPFNRWDMDAVNCSWSLLPS*SFMSES
Trigger: GCTCTCTGACATGAAGCTGCAAGATGGCAAGAGACT...CCAGGAGCAGTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAACTCCGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp GCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAGAGGACATCCAGGATaGTCTCAAAACCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AWLCCVLSQNQHPPKAQSRGHPG*SQNPCP
Trigger: AGGGCAGGGGTTTTGAGAGCATCCTGGATGTCCTCT...ACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp CAGCTGGGCGTTGATGTACATGACAGAGAGGACATCCAGGATGCTCTCAAAACCACGTGGGCTTGGCTCTaGTGTGTCCTTTCCCAAAAT +
Preference number: 4 (lower is better)
Translates to: QLGVDVHDREDIQDALKTTWAWL*CVLSQN
Trigger: ATTTTGGGAAAGGACACAGCAGAGCCAAGCCCACGT...GGTTTTGAGAGCATCCTGGATGTCCTCTCTGTCATGTACATCAACGCCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp TGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATGGTCCGCATCCAGGATaGTCTTGTTGCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: WLCCVLSQNQHPPKAQSNGPHPG*SCCPWP
Trigger: TGGCCAAGGGCAACAAGAGCATCCTGGATGCGGACC...ATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTCCCTGGGCAAATGGCTaGACTGACAGCTGTGACTCA +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSPWANG*TDSCDS
Trigger: TGAGTCACAGCTGTCAGTGCAGCCATTTGCCCAGGG...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GACCTTTCTCTAAGTGCACTGCCTGGAAGCAGGTGCATTCGTGATCTGCACTCTATCTGTCCTGATATCTaGCAGAATTCTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: DLSLSALPGSRCIRDLHSICPDI*QNSPAG
Trigger: CCCGGCAGGAGAATTCTGCCAGATATCAGGACAGAT...AGAGTGCAGATCACGAATGCACCTGCTTCCAGGCAGTGCACTTAGAGAAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATCTGTTGTCCCCTTGAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCATCTGTCCTGATATCTaGCAGAATTCTCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ICCPLETEASPPKSKRQTICPDI*QNSPAG
Trigger: CCCGGCAGGAGAATTCTGCCAGATATCAGGACAGAT...GGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTCAAGGGGACAACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp TACAGCCTGGTGACCATCTCTGGGGGAAGAGCTTCCCCGACGTGGTTACATTCTTTTCCTTTCAACAGGTaGGACATGGATGCTGTGAAC +
Preference number: 4 (lower is better)
Translates to: YSLVTISGGRASPTWLHSFPFNR*DMDAVN
Trigger: GTTCACAGCATCCATGTCCCACCTGTTGAAAGGAAA...AGAATGTAACCACGTCGGGGAAGCTCTTCCCCCAGAGATGGTCACCAGGCTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp TCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTATTACAGTTCCTCTGTAAACTTTTaGACTTCTCTGGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: SWHMWDYQAVTRAVRYYSSSVNF*TSLAFT
Trigger: CGTGAAGGCCAGAGAAGTCCAAAAGTTTACAGAGGA...ACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000566995.5
CDS-3UTR CCA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTAGGAATATGGCCACATaGGGGACCCTGAACACCCAG +
Preference number: 4 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASRNMAT*GTLNTQ
Trigger: CTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCT...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GTCCGTTCGGGATCGTCTGCTGTCCATGGTTCAAGTACATGTAGTGGTCGTTGTGAGAAGCTGTGTCCATaGAGCTCAGACGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: VRSGSSAVHGSSTCSGRCEKLCP*SSDEKS
Trigger: GCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTC...ACAACGACCACTACATGTACTTGAACCATGGACAGCAGACGATCCCGAACGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCTGGTGCACGTGGGCTTaGCTCTGCTGTGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLWCTWA*LCCVLS
Trigger: GGAAAGGACACAGCAGAGCCAAGCCCACGTGCACCA...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp CTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGAAAATGCAAGGCCTGCTGTACGTGGTGCACGTaGGCTTGGCTCTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LLLSGRFDEPPSRKCKACCTWCT*AWLCCV
Trigger: GACACAGCAGAGCCAAGCCCACGTGCACCACGTACA...GCAGGCCTTGCATTTTCTACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp TTTCATAATCATGAGACTCTTCTCCTCGGAGTTTCCTTTCAACAGGTGGGACATCGGAGCCCTTCGCTGTaGCGCGAATGCCCACTGATC +
Preference number: 4 (lower is better)
Translates to: FHNHETLLLGVSFQQVGHRSPSL*RECPLI
Trigger: GATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCG...ATGTCCCACCTGTTGAAAGGAAACTCCGAGGAGAAGAGTCTCATGATTATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp TGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATGCACCTGACACGTCATaGTTCCTGGACCGACGAGTC +
Preference number: 4 (lower is better)
Translates to: WLCCVLSQNQHPPKAQSNAPDTS*FLDRRV
Trigger: GACTCGTCGGTCCAGGAACCATGACGTGTCAGGTGC...ATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR TCA 90 bp AGAACCCAGGCCAGTCACTCACCACTGATTTATGGAATGGACCATATACGTATTAGGCCTAGACAGCTGTaGCTCAGGTGCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RTQASHSPLIYGMDHIRIRPRQL*LRCWFP
Trigger: TGGGAACCAGCACCTGAGTCACAGCTGTCTAGGCCT...AATACGTATATGGTCCATTCCATAAATCAGTGGTGAGTGACTGGCCTGGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp TGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATCTGTGGCTTAGCACGTaGACCACAGAGCCAACCAGA +
Preference number: 4 (lower is better)
Translates to: WLCCVLSQNQHPPKAQSNLWLST*TTEPTR
Trigger: TCTGGTTGGCTCTGTGGTGCACGTGCTAAGCCACAG...ATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAACCCACCGAACACATaGTTGTCATGGTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSNPPNT*LSWSSR
Trigger: CCTCGAGGACCATGACAAGCATGTGTTCGGTGGGTT...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCCAAACTATTCATTTGTaGAAACTAGGATTGCGAGTT +
Preference number: 4 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCQTIHL*KLGLRV
Trigger: AACTCGCAATCCTAGTTTGCACAAATGAATAGTTTG...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ATCTGTTGTCCCCTTGAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCAGAAGTCTTTGCCTTaGAGCTTCATGTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: ICCPLETEASPPKSKRQTQKSLP*SFMSES
Trigger: GCTCTCTGACATGAAGCTGCAAGGCAAAGACTTCTG...GGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTCAAGGGGACAACAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR CCA 90 bp TGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATAGGAATATGGCCACATaGGGGACCCTGAACACCCAG +
Preference number: 4 (lower is better)
Translates to: WLCCVLSQNQHPPKAQSNRNMAT*GTLNTQ
Trigger: CTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCT...ATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp GTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGACCATGTTGCTCTTGTTGCCCTTaGCCAACTGCTCCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: VEPYYKYLLRTHATTRPCCSCCP*PTAPLR
Trigger: CCTCAGAGGAGCAGTTGGCCAAGGGCAACAAGAGCA...ACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTACCTTTGCAGCGGCCTaGGCAGAAGCAGCAATCAAT +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSTFAAA*AEAAIN
Trigger: ATTGATTGCTGCTTCTGCCCAGGCCGCTGCAAAGGT...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCCTCAGGAAGAAACTGTaGACAAAAGCTCCGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLLRKKL*TKAPPH
Trigger: GTGGGGCGGAGCTTTTGTTCACAGTTTCTTCCTGAG...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp CTCCAACCGCCCACACCTCCATCTTATCAAACTGGAAGTTCTCCTGAGCCGACAAGAGAAGGATTTGGATaGGACATTCGGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: LQPPTPPSYQTGSSPEPTREGFG*DIRAVF
Trigger: AAAAACAGCCCGAATGTCTCATCCAAATCCTTCTCT...TGTCGGCTCAGGAGAACTTCCAGTTTGATAAGATGGAGGTGTGGGCGGTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTGTGTGTAAAAGACAGTaGTGCCCAGGTGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASVCKRQ*CPGVHQ
Trigger: TTGGTGCACACCTGGGCATCACTGTCTTTTACACAC...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCCCAGGCTGTGACCCGTaGGGTACGCTATTACAGTTA +
Preference number: 4 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLPGCDP*GTLLQL
Trigger: TAACTGTAATAGCGTACCGCACGGGTCACAGCCTGG...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GACCTTTCTCTAAGTGCACTGCCTGGAAGCAGGTGCATTCGTGATCTGCACTCTAATACAGAACTCCCATaGCATTGGAAGCTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: DLSLSALPGSRCIRDLHSNTELP*HWKLFP
Trigger: TGGGAACAGCTTCCAATGGCATGGGAGTTCTGTATT...AGAGTGCAGATCACGAATGCACCTGCTTCCAGGCAGTGCACTTAGAGAAAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACTCACAAGGCCTGCAAAAATaGGAACAGCTCGATTTACTA +
Preference number: 4 (lower is better)
Translates to: DKLTAPLSGEISWPTGDSQGLQK*EQLDLL
Trigger: TAGTAAATCGAGCTGTTCGCATTTTTGCAGGCCTTG...TGAGTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCCTGCCTGGAAGCAGGTaGATTCGTGATCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLLPGSR*IRDLHS
Trigger: AGAGTGCAGATCACGAATGCACCTGCTTCCAGGCAG...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp GACCTTTCTCTAAGTGCACTGCCTGGAAGCAGGTGCATTCGTGATCTGCACTCTTTGCATCAGTGCCTTTaGCTGTCAGGAGGGAAAATA +
Preference number: 4 (lower is better)
Translates to: DLSLSALPGSRCIRDLHSLHQCL*LSGGKI
Trigger: TATTTTCCCTCCTGACAGGCAAAGGCACTGATGCAA...AGAGTGCAGATCACGAATGCACCTGCTTCCAGGCAGTGCACTTAGAGAAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp TGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATAGAGCTTCCCCGACGTaGTTCTGTAGTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: WLCCVLSQNQHPPKAQSNRASPT*FCSAFR
Trigger: TCTGAAGGCACTACAGAACCACGTCGGGGAAGCTCT...ATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR CCA 90 bp TGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATTGTGCTGCTGTGAACTGCTCCTaGGACACGTTCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: CCVLSQNQHPPKAQSNCAAVNCS*DTFSLG
Trigger: ACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGC...AGCACAATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CCTACACGATCTTCAGCATTTCAGGATCACCGGAGCTTGTTTAAAGTCAGTCTACAGAGGGCGTCTTCTTaGCACATGTGGGACTACCAG +
Preference number: 4 (lower is better)
Translates to: PTRSSAFQDHRSLFKVSLQRASS*HMWDYQ
Trigger: CTGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTG...TAGACTGACTTTAAACAAGCTCCGGTGATCCTGAAATGCTGAAGATCGTGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp AGAACCCAGGCCAGTCACTCACCACTGATTTATGGAATGGACCATATACGTATTACTACCTCAGCCTCCTaGGTAGCTGAGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: RTQASHSPLIYGMDHIRITTSAS*VAEITG
Trigger: GCCTGTAATCTCAGCTACTCAGGAGGCTGAGGTAGT...AATACGTATATGGTCCATTCCATAAATCAGTGGTGAGTGACTGGCCTGGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp GAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTCCCCAAATGTCGTGTaGATCATTCATTATCTACTC +
Preference number: 4 (lower is better)
Translates to: ETEASPPKSKRQTHRTHASPNVV*IIHYLL
Trigger: GAGTAGATAATGAATGATTCACACGACATTTGGGGA...AGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp TGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATTGTGCTAGAGGACATCCAGGATaGTCTCAAAACCCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CCVLSQNQHPPKAQSNCARGHPG*SQNPCP
Trigger: AGGGCAGGGGTTTTGAGAGCATCCTGGATGTCCTCT...AGCACAATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CCA 90 bp CCTACACGATCTTCAGCATTTCAGGATCACCGGAGCTTGTTTAAAGTCAGTCTAAGAGCTTCCCCGACGTaGTTCTGTAGTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PTRSSAFQDHRSLFKVSLRASPT*FCSAFR
Trigger: TCTGAAGGCACTACAGAACCACGTCGGGGAAGCTCT...TAGACTGACTTTAAACAAGCTCCGGTGATCCTGAAATGCTGAAGATCGTGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp TCCATGGTTCAAGTACATGTAGTGGTCGTTGTAGCCCGTGTGTGTGTACACAGCTCCTCTGTAAACTTTTaGACTTCTCTGGCCTTCACG +
Preference number: 4 (lower is better)
Translates to: SMVQVHVVVVVARVCVHSSSVNF*TSLAFT
Trigger: CGTGAAGGCCAGAGAAGTCCAAAAGTTTACAGAGGA...GCTGTGTACACACACACGGGCTACAACGACCACTACATGTACTTGAACCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp CTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGAAAATGCAAGGCCTGCGAAAGCCCTTGCAAATaGCCACACTCAGGAATATGG +
Preference number: 4 (lower is better)
Translates to: LLLSGRFDEPPSRKCKACESPCK*PHSGIW
Trigger: CCATATTCCTGAGTGTGGTCATTTGCAAGGGCTTTC...GCAGGCCTTGCATTTTCTACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp AAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTCAATTGATCAATCTCTaGCTGTTCCTCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: KLRLHLPRARGKPTEHMLQLINL*LFLRKK
Trigger: TTTCTTCCTGAGGAACAGGCAGAGATTGATCAATTG...AAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR GCA 90 bp GTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGACCATGTCCTCCCAGTAGAAAATaGAAGGCCTGCAAAAATGCG +
Preference number: 4 (lower is better)
Translates to: VEPYYKYLLRTHATTRPCPPSRK*KACKNA
Trigger: CGCATTTTTGCAGGCCTTGCATTTTCTACTGGGAGG...ACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTTCAGAGAGAAGGATTTaGATGAGACATTCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSSERRI*MRHSGC
Trigger: ACAGCCCGAATGTCTCATCCAAATCCTTCTCTCTGA...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp AGAACAAACTATTCATTTGTGCAAACTAGGATTGCGAGTTTCTCAGAGCCAGGTGCTGTGAACTGCTCCTaGGACACGTTCTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RTNYSFVQTRIASFSEPGAVNCS*DTFSLG
Trigger: ACCCAGTGAGAACGTGTCCCAGGAGCAGTTCACAGC...ACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp TGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTAATTGTGCTGAGAAGCTGTGTCCATaGAGCTCAGACGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: CCVLSQNQHPPKAQSNCAEKLCP*SSDEKS
Trigger: GCTCTTTTCGTCTGAGCTCCATGGACACAGCTTCTC...AGCACAATTACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR TCA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTAGAGCATCAAACAATTaGTCAATCTCTGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASRASNN*SISACS
Trigger: GGAACAGGCAGAGATTGATCAATTGTTTGATGCTCT...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGAGAAGGATTTGGATaGGACATTCGGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSREGFG*DIRAVF
Trigger: AAAAACAGCCCGAATGTCTCATCCAAATCCTTCTCT...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp ACCACTGATTTATGGAATGGACCATATACGTATTTATCAACCAAGTTCCCAAACGGGACATGGATGCTGTaGACTGCTCCTGGGACACGT +
Preference number: 4 (lower is better)
Translates to: TTDLWNGPYTYLSTKFPNGTWML*TAPGTR
Trigger: ACGTGTCCCAGGAGCAGTTCACAGCATCCATGTCCC...GTTTGGGAACTTGGTTGATAAATACGTATATGGTCCATTCCATAAATCAGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp GTTCAAGAGACACACGAGGCAGGCTATCTCTCTCCTCTGATGTTCATCTCAAGTGCTATCTCTCTCCTCTaGTGTTCATCTCAAGTTAGA +
Preference number: 4 (lower is better)
Translates to: VQETHEAGYLSPLMFISSAISLL*CSSQVR
Trigger: TCTAACTTGAGATGAACATCAGAGGAGAGAGATAGC...ACTTGAGATGAACATCAGAGGAGAGAGATAGCCTGCCTCGTGTGTCTCTTGAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR GCA 90 bp CTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGAAAATGCAAGGCCTGCATTTATGAGGCATTCTaGCTGAGTCAGGGCTATTGC +
Preference number: 4 (lower is better)
Translates to: LLLSGRFDEPPSRKCKACIYEAF*LSQGYC
Trigger: GCAATAGCCCTGACTCAGGCAGAATGCCTCATAAAT...GCAGGCCTTGCATTTTCTACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp AATCATTTTCATAATCATGAGACTCTTCTCCTCGGAGTTTCCTTTCAACAGGTGAGGAATATGGCCACATaGGGGACCCTGAACACCCAG +
Preference number: 4 (lower is better)
Translates to: NHFHNHETLLLGVSFQQVRNMAT*GTLNTQ
Trigger: CTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCT...CACCTGTTGAAAGGAAACTCCGAGGAGAAGAGTCTCATGATTATGAAAATGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp TTTCATAATCATGAGACTCTTCTCCTCGGAGTTTCCTTTCAACAGGTGGGACATAACACATGCTTGTCATaGTCCTCGAGGACAGCCACA +
Preference number: 4 (lower is better)
Translates to: FHNHETLLLGVSFQQVGHNTCLS*SSRTAT
Trigger: TGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTT...ATGTCCCACCTGTTGAAAGGAAACTCCGAGGAGAAGAGTCTCATGATTATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CCA 90 bp AGAACAAACTATTCATTTGTGCAAACTAGGATTGCGAGTTTCTCAGAGCCAGGTTGTACACAGCCATGCTaGGGCAGATGGAGAACAGGA +
Preference number: 4 (lower is better)
Translates to: RTNYSFVQTRIASFSEPGCTQPC*GRWRTG
Trigger: TCCTGTTCTCCATCTGCCCCAGCATGGCTGTGTACA...ACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp AACTTTTGGACTTCTCTGGCCTTCACGGGACCTTCTGTGGCAGAAATCATTTTCAGAGAAGGATTTGGATaGGACATTCGGGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: NFWTSLAFTGPSVAEIIFREGFG*DIRAVF
Trigger: AAAAACAGCCCGAATGTCTCATCCAAATCCTTCTCT...GAAAATGATTTCTGCCACAGAAGGTCCCGTGAAGGCCAGAGAAGTCCAAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR TCA 90 bp AGAACCCAGGCCAGTCACTCACCACTGATTTATGGAATGGACCATATACGTATTCCAGTCACTCACCACTaGTTTATGGAATGGACCATA +
Preference number: 4 (lower is better)
Translates to: RTQASHSPLIYGMDHIRIPVTHH*FMEWTI
Trigger: TATGGTCCATTCCATAAATCAGTGGTGAGTGACTGG...AATACGTATATGGTCCATTCCATAAATCAGTGGTGAGTGACTGGCCTGGGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp CTGGGTGTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGACTAGTCCTTAGAACCTaGATTCTCATTCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGVEPYYKYLLRTHATTRLVLRT*ILILVS
Trigger: TGAAACCAGAATGAGAATTCAGGTTCTAAGGACTAG...TCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCACACCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ACCACTGATTTATGGAATGGACCATATACGTATTTATCAACCAAGTTCCCAAACCAGGTGGGACATGGATaGTGTGAACTGCTCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TTDLWNGPYTYLSTKFPNQVGHG*CELLLG
Trigger: TCCCAGGAGCAGTTCACAGCATCCATGTCCCACCTG...GTTTGGGAACTTGGTTGATAAATACGTATATGGTCCATTCCATAAATCAGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp ACCACTGATTTATGGAATGGACCATATACGTATTTATCAACCAAGTTCCCAAACCCTCCACACACTGTCTaGGCGTGCACTTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TTDLWNGPYTYLSTKFPNPPHTV*ACTFLS
Trigger: CGAAAGAAAAGTGCACGCTCAGACAGTGTGTGGAGG...GTTTGGGAACTTGGTTGATAAATACGTATATGGTCCATTCCATAAATCAGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR GCA 90 bp ATTCTGCCTGAGTCAGGGCTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGGCATGTGTTACCATaGCTGGTTAATTTTCGTATT +
Preference number: 4 (lower is better)
Translates to: ILPESGLLLSGRFDEPPSRHVLP*LVNFRI
Trigger: AATACGAAAATTAACCAGGCATGGTAACACATGCCT...ACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGGCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTCTCACCACTGATTTATaGAATGGACCATATACGTAT +
Preference number: 4 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASLTTDL*NGPYTY
Trigger: ATACGTATATGGTCCATTCCATAAATCAGTGGTGAG...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CCA 90 bp GTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGACCATGTTTAACTGAGGCATCATaGCAGTTTAATAGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: VEPYYKYLLRTHATTRPCLTEAS*QFNSEV
Trigger: TACCTCACTATTAAACTGCCATGATGCCTCAGTTAA...ACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR TCA 90 bp ACCACTGATTTATGGAATGGACCATATACGTATTTATCAACCAAGTTCCCAAACATTACAAATACCTTCTaGGGACTCATGCCACCACCA +
Preference number: 4 (lower is better)
Translates to: TTDLWNGPYTYLSTKFPNITNTF*GLMPPP
Trigger: TGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAAT...GTTTGGGAACTTGGTTGATAAATACGTATATGGTCCATTCCATAAATCAGTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp AGCAGGCACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGACCTGCACCCGGGGGTaGGGCCCTGGGGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SRHQRCRCSRGSWALMYMTCTRG*GPGASF
Trigger: GAAGGAAGCCCCAGGGCCCAACCCCCGGGTGCAGGT...CATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTGCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp AGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCTTCGCTGTCCTGCCCTGGTCCACTaGACGCTCAGGGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: RLRRLLIHRPGLPGALRCPALVH*TLRDQG
Trigger: ACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGG...ACAGCGAAGGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp CACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGACAGAGGACAGCTGCGGGCTGTaGTACGTGGTGCACGTGGGC +
Preference number: 5 (lower is better)
Translates to: HQRCRCSRGSWALMYMTEDSCGL*YVVHVG
Trigger: GCCCACGTGCACCACGTACAACAGCCCGCAGCTGTC...CTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTGACAGCTGCGGGCTGTaGTACGTGGTGCACGTGGGC +
Preference number: 5 (lower is better)
Translates to: GSSPEPTAAGCCTWCTWADSCGL*YVVHVG
Trigger: GCCCACGTGCACCACGTACAACAGCCCGCAGCTGTC...AGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS TCA 90 bp CCCTCGAGATGGCAGTGCCCTGGCAATGGGGCTGGAATAAATGCCTaGGCTACACCTGGAGCCGCTCATCCAAGGGCGTCGGTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: PSRWQCPGNGAGINA*ATPGAAHPRASVLP
Trigger: TGGCAGGACCGACGCCCTTGGATGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS GCA 90 bp ATGCCTGAGCTACACCTGGAGCCGCTCATCCAAGGGCGTCGGTCCTaGCAAGGTCACTGGAAGGGGAATGTTCCCAGCCAGTCAAGGGGC +
Preference number: 5 (lower is better)
Translates to: MPELHLEPLIQGRRS*QGHWKGNVPSQSRG
Trigger: GCCCCTTGACTGGCTGGGAACATTCCCCTTCCAGTGACCTTGGCAGGACCGACGCCCTTGGATGAGCGGCTCCAGGTGTAGCTCAGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS GCA 90 bp GAACCCCTCGAGATGGCAGTGCCCTGGCAATGGGGCTGGAATAAATaGCTGAGCTACACCTGGAGCCGCTCATCCAAGGGCGTCGGTCCT +
Preference number: 5 (lower is better)
Translates to: EPLEMAVPWQWGWNK*LSYTWSRSSKGVGP
Trigger: AGGACCGACGCCCTTGGATGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 90 bp GCAGTGCCCTGGCAATGGGGCTGGAATAAATGCCTGAGCTACACCTaGAGCCGCTCATCCAAGGGCGTCGGTCCTGCCAAGGTCACTGGA +
Preference number: 5 (lower is better)
Translates to: AVPWQWGWNKCLSYT*SRSSKGVGPAKVTG
Trigger: TCCAGTGACCTTGGCAGGACCGACGCCCTTGGATGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 90 bp CTCCGCCCCACACGGCTTCTGCTGTTCCCCATCTGTCCTGATATCTaGCAGAATTCTCTCCGCACCTGCCTCCAGGCACCCACGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LRPTRLLLFPICPDI*QNSLRTCLQAPTKL
Trigger: CAGCTTCGTGGGTGCCTGGAGGCAGGTGCGGAGAGAATTCTGCCAGATATCAGGACAGATGGGGAACAGCAGAAGCCGTGTGGGGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565079.5
CDS-3UTR CAA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGGCCCCAGAAGTCTCTaGCCATCTTGCAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLGPRSL*PSCSFM
Trigger: CATGAAGCTGCAAGATGGCAAGAGACTTCTGGGGCC...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343629.11
ENST00000570036.5
CDS-3UTR CAA 90 bp CAGACCCATCACCGCGTCTGTCTCCCCATCTCTGGGAGGGCAGTCAGGAGGGACGGCCCCAGAAGTCTCTaGCCATCTTGCAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: QTHHRVCLPISGRAVRRDGPRSL*PSCSFM
Trigger: CATGAAGCTGCAAGATGGCAAGAGACTTCTGGGGCC...GTCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAGACGCGGTGATGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CAA 90 bp GTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTTGGCCCACCGAACACATGCTaGTCATGGTCCTCGAGGACA +
Preference number: 5 (lower is better)
Translates to: VLLSRQLRAVVRGARGLGPPNTC*SWSSRT
Trigger: TGTCCTCGAGGACCATGACAAGCATGTGTTCGGTGG...GCCAAGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GTCCGGGACTTCCCGGAGCCCTTCGCTGTGGCGCGAATGCCCACTGATCTCCAGGCATCTGTTGTCCCCTaGAAACTGAGGCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: VRDFPEPFAVARMPTDLQASVVP*KLRLHL
Trigger: GAGGTGAAGCCTCAGTTTCAAGGGGACAACAGATGC...CTGGAGATCAGTGGGCATTCGCGCCACAGCGAAGGGCTCCGGGAAGTCCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp CACCAGCGGTGCCGCTGCTCCCGAGGCAGCTGGGCGTTGATGTACATGACAGAGATGCTCTTGTTGCCCTaGGCCAACTGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: HQRCRCSRGSWALMYMTEMLLLP*ANCSSE
Trigger: CTCAGAGGAGCAGTTGGCCAAGGGCAACAAGAGCAT...CTCTGTCATGTACATCAACGCCCAGCTGCCTCGGGAGCAGCGGCACCGCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp TGGGCCTCAGGGTCCGCATCCAGGATGCTCTTGTTGCCCTTGGCCAACTGCTCCGCATCCAGGATGCTCTaGTTGCCCTTGGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: WASGSASRMLLLPLANCSASRML*LPLANC
Trigger: GCAGTTGGCCAAGGGCAACAAGAGCATCCTGGATGC...GGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGGATGCGGACCCTGAGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGCTGCATCCAGGATGCTCTaGTTGCCCTTGGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: GSSPEPTAAGCCTWCTWAASRML*LPLANC
Trigger: GCAGTTGGCCAAGGGCAACAAGAGCATCCTGGATGC...AGCCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GGACATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGAGAGGGGCTGCAGGCGTaGCCCTCTACCCAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: GHPGCSQNPCPGPLDAQGEGLQA*PSTQRN
Trigger: ATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTC...TCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GGAGGGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGTGACTCACCGTGTGTaGTTTTCCAGACGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: GGKRGCRRCPLPRGIQVLVTHRV*FSRRGQ
Trigger: CTGCCCACGTCTGGAAAACAACACACGGTGAGTCAC...CAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp CGAACACATGCTTGTCATGGTCCTCGAGGACAGCCACACAGGGTCCCCGGTGAGGTGCGAAGGGGCAGCTaGAGCCTGGGCAAGAAGTTC +
Preference number: 5 (lower is better)
Translates to: RTHACHGPRGQPHRVPGEVRRGS*SLGKKF
Trigger: GAACTTCTTGCCCAGGCTCAAGCTGCCCCTTCGCAC...CTCACCGGGGACCCTGTGTGGCTGTCCTCGAGGACCATGACAAGCATGTGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS TCA 90 bp CCTTCCCTGTCAGGTCGACCCTCCGCATGCCATCATACAGCCTGGTaGCCATCTCTGGGGGAAGAGCTTCCCCGACGTGGTTCTGTAGTG +
Preference number: 5 (lower is better)
Translates to: PSLSGRPSACHHTAW*PSLGEELPRRGSVV
Trigger: CACTACAGAACCACGTCGGGGAAGCTCTTCCCCCAGAGATGGTCACCAGGCTGTATGATGGCATGCGGAGGGTCGACCTGACAGGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343629.11
ENST00000561807.5
ENST00000562447.5
ENST00000565079.5
ENST00000566995.5
CDS-3UTR CAA 90 bp GAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCGCATCTGTTGTCCCCTaGAAACTGAGGCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: EEGLQALPSTQRNPGPGSASVVP*KLRLHL
Trigger: GAGGTGAAGCCTCAGTTTCAAGGGGACAACAGATGC...GGAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS TCA 90 bp CCCATAGACCCGGCACCGTGTAATAACTGGGCCCGTGTCCTCGCCTaGAAACTGGGGGTCACACGGCCTGTCCTGAAGAACTCTGATGTG +
Preference number: 5 (lower is better)
Translates to: PIDPAPCNNWARVLA*KLGVTRPVLKNSDV
Trigger: CACATCAGAGTTCTTCAGGACAGGCCGTGTGACCCCCAGTTTTCAGGCGAGGACACGGGCCCAGTTATTACACGGTGCCGGGTCTATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS-3UTR CAA 90 bp TCCATGGTTCAAGTACATGTAGTGGTCGTTGTAGCCCGTGTGTGTGTACACAGCACCTGCACCCGGGGGTaGGGCCCTGGGGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SMVQVHVVVVVARVCVHSTCTRG*GPGASF
Trigger: GAAGGAAGCCCCAGGGCCCAACCCCCGGGTGCAGGT...GCTGTGTACACACACACGGGCTACAACGACCACTACATGTACTTGAACCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACCCTGCCCTGGTCCACTaGACGCTCAGGGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDPALVH*TLRDQG
Trigger: ACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGG...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp AGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTGTCATGCCTGCCCTGGTCCACTaGACGCTCAGGGACCAGGGT +
Preference number: 5 (lower is better)
Translates to: RLHLPRARGKPTEHMLVMPALVH*TLRDQG
Trigger: ACCCTGGTCCCTGAGCGTCAAGTGGACCAGGGCAGG...CATGACAAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp CGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCTGCATGCTCTTGTTGCCCTaGGCCAACTGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RVSQSQVRYCQVHWPQPCMLLLP*ANCSSE
Trigger: CTCAGAGGAGCAGTTGGCCAAGGGCAACAAGAGCAT...GCAGGGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS CCA 90 bp GGCAGAATTCTCCCCACAAGCTGGGGAGATTCCAACTGCCTCATCTaGACAGGCTTCGAAGTCCTGTCTGTGTCTCAGAGCCCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: GRILPTSWGDSNCLI*TGFEVLSVSQSPEA
Trigger: GGCCTCTGGGCTCTGAGACACAGACAGGACTTCGAAGCCTGTCCAGATGAGGCAGTTGGAATCTCCCCAGCTTGTGGGGAGAATTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS CCA 90 bp AGAGCAAGACTCCCCACAAGCTGGGGAGATTCCAACTGCCTCATCTaGACAGGCTTCGAAGTCCTGTCTGTGTCTCAGAGCCCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: RARLPTSWGDSNCLI*TGFEVLSVSQSPEA
Trigger: GGCCTCTGGGCTCTGAGACACAGACAGGACTTCGAAGCCTGTCCAGATGAGGCAGTTGGAATCTCCCCAGCTTGTGGGGAGTCTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565765.1
CDS CCA 90 bp GGTGACAGTAAGAGCGTGGGAGCACACACCTGGGACTCGAACAGCTaGCTTCAAACCCGAGCTCAGGAACAGCATGACCTTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: GDSKSVGAHTWDSNS*LQTRAQEQHDLAKV
Trigger: GACCTTGGCAAGGTCATGCTGTTCCTGAGCTCGGGTTTGAAGCCAGCTGTTCGAGTCCCAGGTGTGTGCTCCCACGCTCTTACTGTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 90 bp AGCATTTCAGAACCCCTCGAGATGGCAGTGCCCTGGCAATGGGGCTaGAATAAATGCCTGAGCTACACCTGGAGCCGCTCATCCAAGGGC +
Preference number: 5 (lower is better)
Translates to: SISEPLEMAVPWQWG*NKCLSYTWSRSSKG
Trigger: GCCCTTGGATGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGGGTTCTGAAATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 90 bp CCAAGCAGCATTTCAGAACCCCTCGAGATGGCAGTGCCCTGGCAATaGGGCTGGAATAAATGCCTGAGCTACACCTGGAGCCGCTCATCC +
Preference number: 5 (lower is better)
Translates to: PSSISEPLEMAVPWQ*GWNKCLSYTWSRSS
Trigger: GGATGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGGGTTCTGAAATGCTGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 90 bp TCCTCTCCAAGCAGCATTTCAGAACCCCTCGAGATGGCAGTGCCCTaGCAATGGGGCTGGAATAAATGCCTGAGCTACACCTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: SSPSSISEPLEMAVP*QWGWNKCLSYTWSR
Trigger: GCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGGGTTCTGAAATGCTGCTTGGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS-3UTR CAA 90 bp CTCCAGGAAGGCTCAGGCGGCTCCTCATTCATCGTCCGGGACTTCCCGGAGCCCATCCTCTGTAAACTTTaGGACTTCTCTGGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LQEGSGGSSFIVRDFPEPILCKL*DFSGLH
Trigger: GTGAAGGCCAGAGAAGTCCAAAAGTTTACAGAGGAT...GGGCTCCGGGAAGTCCCGGACGATGAATGAGGAGCCGCCTGAGCCTTCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp ATGCCATTGGAAGCTGTTCCCAGAAAGCGTCGAGATTTTCATCCAGATGCCTCTACCTGCACCCGGGGGTaGGGCCCTGGGGCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: MPLEAVPRKRRDFHPDASTCTRG*GPGASF
Trigger: GAAGGAAGCCCCAGGGCCCAACCCCCGGGTGCAGGT...AGAGGCATCTGGATGAAAATCTCGACGCTTTCTGGGAACAGCTTCCAATGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp CAGACCCATCACCGCGTCTGTCTCCCCATCTCTGGGAGGGCAGTCAGGAGGGACAAGTCTCTTGCCATCTaGCAGCTTCATGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: QTHHRVCLPISGRAVRRDKSLAI*QLHVRE
Trigger: CTCTCTGACATGAAGCTGCAAGATGGCAAGAGACTT...GTCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAGACGCGGTGATGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CAA 90 bp CCTGGGCCTCAGGGTCCGCATCCAGGATGCTCTTGTTGCCCTTGGCCAACTGCTAGGATGAGAAAGCCCTaGCAAATGACCACACTCAGG +
Preference number: 5 (lower is better)
Translates to: PGPQGPHPGCSCCPWPTARMRKP*QMTTLR
Trigger: CCTGAGTGTGGTCATTTGCAAGGGCTTTCTCATCCT...AGCAGTTGGCCAAGGGCAACAAGAGCATCCTGGATGCGGACCCTGAGGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp CTGGAAGTTCTCCTGAGCCGACAGCTGCGGGCTGTTGTACGTGGTGCACGTGGGAGGATGAGAAAGCCCTaGCAAATGACCACACTCAGG +
Preference number: 5 (lower is better)
Translates to: LEVLLSRQLRAVVRGARGRMRKP*QMTTLR
Trigger: CCTGAGTGTGGTCATTTGCAAGGGCTTTCTCATCCT...CCCACGTGCACCACGTACAACAGCCCGCAGCTGTCGGCTCAGGAGAACTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GGACATCCAGGATGCTCTCAAAACCCCTGCCCTGGTCCACTTGACGCTCAGGGATCAGAGGGCGTCTTCTaGGCACATGTGGGACTACCA +
Preference number: 5 (lower is better)
Translates to: GHPGCSQNPCPGPLDAQGSEGVF*AHVGLP
Trigger: TGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTGA...TCCCTGAGCGTCAAGTGGACCAGGGCAGGGGTTTTGAGAGCATCCTGGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS GCA 90 bp CTGGGTGACAGAGCAAGACTCCCCACAAGCTGGGGAGATTCCAACTaGCTCATCTGGACAGGCTTCGAAGTCCTGTCTGTGTCTCAGAGC +
Preference number: 5 (lower is better)
Translates to: LGDRARLPTSWGDSN*LIWTGFEVLSVSQS
Trigger: GCTCTGAGACACAGACAGGACTTCGAAGCCTGTCCAGATGAGGCAGTTGGAATCTCCCCAGCTTGTGGGGAGTCTTGCTCTGTCACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565765.1
CDS GCA 90 bp CTGTTCCCCATCTGTCCTGATATCTGGCAGAATTCTCTCCGCACCTaGCTCCAGGCACCCACGAAGCTGGAGACTGGACACTCATATCCG +
Preference number: 5 (lower is better)
Translates to: LFPICPDIWQNSLRT*LQAPTKLETGHSYP
Trigger: CGGATATGAGTGTCCAGTCTCCAGCTTCGTGGGTGCCTGGAGGCAGGTGCGGAGAGAATTCTGCCAGATATCAGGACAGATGGGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565079.5
CDS CCA 90 bp CTCCGCCCCACACGGCTTCTGCTGTTCCCCATCTGTCCTGATATCTaGCAGAATTCTCTCAGCCGGGTGTGGTGGCGTGTGACTATAGTT +
Preference number: 5 (lower is better)
Translates to: LRPTRLLLFPICPDI*QNSLSRVWWRVTIV
Trigger: AACTATAGTCACACGCCACCACACCCGGCTGAGAGAATTCTGCCAGATATCAGGACAGATGGGGAACAGCAGAAGCCGTGTGGGGCGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561807.5
ENST00000565765.1
CDS CCA 90 bp GAATTCTCTCCGCACCTGCCTCCAGGCACCCACGAAGCTGGAGACTaGACACTCATATCCGCACAACCTTGCCTGCCAAGAGAAAATGGG +
Preference number: 5 (lower is better)
Translates to: EFSPHLPPGTHEAGD*TLISAQPCLPRENG
Trigger: CCCATTTTCTCTTGGCAGGCAAGGTTGTGCGGATATGAGTGTCCAGTCTCCAGCTTCGTGGGTGCCTGGAGGCAGGTGCGGAGAGAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565079.5
CDS-3UTR CAA 90 bp CCCATCACCGCGTCTGTCTCCCCATCTCTGGGAGGGCAGTCAGGAGGGACGTGGCAGAGCATCAAACAATaGATCAATCTCTGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: PITASVSPSLGGQSGGTWQSIKQ*INLCLF
Trigger: GAACAGGCAGAGATTGATCAATTGTTTGATGCTCTG...CCACGTCCCTCCTGACTGCCCTCCCAGAGATGGGGAGACAGACGCGGTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CAA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGCCACCGAACACATGCTaGTCATGGTCCTCGAGGACA +
Preference number: 5 (lower is better)
Translates to: PVRYAITVKPCGREEGLQPPNTC*SWSSRT
Trigger: TGTCCTCGAGGACCATGACAAGCATGTGTTCGGTGG...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp CCCGTGCGGTACGCTATTACAGTTAAACCATGTGGGAGGGAAGAGGGGCTGCAGATGCTCTTGTTGCCCTaGGCCAACTGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PVRYAITVKPCGREEGLQMLLLP*ANCSSE
Trigger: CTCAGAGGAGCAGTTGGCCAAGGGCAACAAGAGCAT...CTGCAGCCCCTCTTCCCTCCCACATGGTTTAACTGTAATAGCGTACCGCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GCAAATGACCACACTCAGGAATATGGCCACATGGGGGACCCTGAACACCCAGTCTCCAGGATGCTCTTGTaGCCCTTGGCCAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: ANDHTQEYGHMGDPEHPVSRMLL*PLANCS
Trigger: GGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGGA...GACTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCTGAGTGTGGTCATTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS CCA 90 bp TTTTCCATCCCTCACCCACTAAGAGTGGAGGTGACAGTAAGAGCGTaGGAGCACACACCTGGGACTCGAACAGCTGGCTTCAAACCCGAG +
Preference number: 5 (lower is better)
Translates to: FSIPHPLRVEVTVRA*EHTPGTRTAGFKPE
Trigger: CTCGGGTTTGAAGCCAGCTGTTCGAGTCCCAGGTGTGTGCTCCCACGCTCTTACTGTCACCTCCACTCTTAGTGGGTGAGGGATGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS-3UTR CAA 90 bp GGAAGAGGGGCTGCAGGCGTTGCCCTCTACCCAGAGGAATCCAGGTCCTGGCTCCAGAGCATCAAACAATaGATCAATCTCTGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: GRGAAGVALYPEESRSWLQSIKQ*INLCLF
Trigger: GAACAGGCAGAGATTGATCAATTGTTTGATGCTCTG...GAGCCAGGACCTGGATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343629.11
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp ATCTGTTGTCCCCTTGAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCGTGGTGCACGTGGGCTaGGCTCTGCTGTGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: ICCPLETEASPPKSKRQTVVHVG*ALLCPF
Trigger: GAAAGGACACAGCAGAGCCAAGCCCACGTGCACCAC...GGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTCAAGGGGACAACAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACTCCAGGATGCTCTTGTaGCCCTTGGCCAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDSRMLL*PLANCS
Trigger: GGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGGA...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp AGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTGTCATGTCCAGGATGCTCTTGTaGCCCTTGGCCAACTGCTCC +
Preference number: 5 (lower is better)
Translates to: RLHLPRARGKPTEHMLVMSRMLL*PLANCS
Trigger: GGAGCAGTTGGCCAAGGGCAACAAGAGCATCCTGGA...CATGACAAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GCTTGGCTCTGCTGTGTCCTTTCCCAAAATCAACATCCACCCAAAGCCCAAAGTGAGGGGCTGCAGGCGTaGCCCTCTACCCAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: AWLCCVLSQNQHPPKAQSEGLQA*PSTQRN
Trigger: ATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTC...ACTTTGGGCTTTGGGTGGATGTTGATTTTGGGAAAGGACACAGCAGAGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp GCAAATGACCACACTCAGGAATATGGCCACATGGGGGACCCTGAACACCCAGTCGGGCCCCAGAAGTCTTaGCCTTGCAGCTTCATGTCA +
Preference number: 5 (lower is better)
Translates to: ANDHTQEYGHMGDPEHPVGPQKS*PCSFMS
Trigger: TGACATGAAGCTGCAAGGCAAAGACTTCTGGGGCCC...GACTGGGTGTTCAGGGTCCCCCATGTGGCCATATTCCTGAGTGTGGTCATTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS CCA 90 bp CCCATCTGTCCTGATATCTGGCAGAATTCTCTCAGCCGGGTGTGGTaGCGTGTGACTATAGTTCCAGCTATTCAGGAGGCTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PICPDIWQNSLSRVW*RVTIVPAIQEAEVG
Trigger: TCCCACCTCAGCCTCCTGAATAGCTGGAACTATAGTCACACGCCACCACACCCGGCTGAGAGAATTCTGCCAGATATCAGGACAGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561807.5
ENST00000565765.1
CDS-3UTR CAA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCAGGATGAGAAAGCCCTaGCAAATGACCACACTCAGG +
Preference number: 5 (lower is better)
Translates to: IASFSEPGKVLSGPLAPARMRKP*QMTTLR
Trigger: CCTGAGTGTGGTCATTTGCAAGGGCTTTCTCATCCT...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp AGAGACAAGCTCACAGCACCTTTAAGTGGGGAGATCTCATGGCCAACCGGTGACCCACCGAACACATGCTaGTCATGGTCCTCGAGGACA +
Preference number: 5 (lower is better)
Translates to: RDKLTAPLSGEISWPTGDPPNTC*SWSSRT
Trigger: TGTCCTCGAGGACCATGACAAGCATGTGTTCGGTGG...GTCACCGGTTGGCCATGAGATCTCCCCACTTAAAGGTGCTGTGAGCTTGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCGACAGCTGCGGGCTGTaGTACGTGGTGCACGTGGGC +
Preference number: 5 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLDSCGL*YVVHVG
Trigger: GCCCACGTGCACCACGTACAACAGCCCGCAGCTGTC...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS GCA 90 bp CCCGAGCTCAGGAACAGCATGACCTTGCCAAGGTCTGGACCTCTGTaGCTCAGTTTCCTCAGGTATAAAATGGAGGTAAGGCCAGAACCT +
Preference number: 5 (lower is better)
Translates to: PELRNSMTLPRSGPL*LSFLRYKMEVRPEP
Trigger: AGGTTCTGGCCTTACCTCCATTTTATACCTGAGGAAACTGAGGCACAGAGGTCCAGACCTTGGCAAGGTCATGCTGTTCCTGAGCTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 90 bp TTCCCCATCTGTCCTGATATCTGGCAGAATTCTCTCAGCCGGGTGTaGTGGCGTGTGACTATAGTTCCAGCTATTCAGGAGGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: FPICPDIWQNSLSRV*WRVTIVPAIQEAEV
Trigger: CACCTCAGCCTCCTGAATAGCTGGAACTATAGTCACACGCCACCACACCCGGCTGAGAGAATTCTGCCAGATATCAGGACAGATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561807.5
ENST00000565765.1
CDS-3UTR CAA 90 bp AGGTTTGAGTGTCCAGAGGCAGAACCGTGCACCAAGAGAAGCCCACAGAGAGAGAGAACTCCCATGCCATaGGAAGCTGTTCCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: RFECPEAEPCTKRSPQRERTPMP*EAVPRK
Trigger: CTTTCTGGGAACAGCTTCCAATGGCATGGGAGTTCT...CTCTCTCTGTGGGCTTCTCTTGGTGCACGGTTCTGCCTCTGGACACTCAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp ATTGCGAGTTTCTCAGAGCCAGGTAAGGTACTGTCAGGTCCACTGGCCCCAGCCCAGGATCACCGGAGCTaGTTTAAAGTCAGTCTACAC +
Preference number: 5 (lower is better)
Translates to: IASFSEPGKVLSGPLAPAQDHRS*FKVSLH
Trigger: GTGTAGACTGACTTTAAACAAGCTCCGGTGATCCTG...GGCTGGGGCCAGTGGACCTGACAGTACCTTACCTGGCTCTGAGAAACTCGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp GTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGACCATGTGTGGTGCACGTGGGCTaGGCTCTGCTGTGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: VEPYYKYLLRTHATTRPCVVHVG*ALLCPF
Trigger: GAAAGGACACAGCAGAGCCAAGCCCACGTGCACCAC...ACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp CTTTTGGACTTCTCTGGCCTTCACGGGACCTTCTGTGGCAGAAATCATTTTCATGTGGTGCACGTGGGCTaGGCTCTGCTGTGTCCTTTC +
Preference number: 5 (lower is better)
Translates to: LLDFSGLHGTFCGRNHFHVVHVG*ALLCPF
Trigger: GAAAGGACACAGCAGAGCCAAGCCCACGTGCACCAC...ATGAAAATGATTTCTGCCACAGAAGGTCCCGTGAAGGCCAGAGAAGTCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CAA 90 bp AGAACCCAGGCCAGTCACTCACCACTGATTTATGGAATGGACCATATACGTATTGAGGGGCTGCAGGCGTaGCCCTCTACCCAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: RTQASHSPLIYGMDHIRIEGLQA*PSTQRN
Trigger: ATTCCTCTGGGTAGAGGGCAACGCCTGCAGCCCCTC...AATACGTATATGGTCCATTCCATAAATCAGTGGTGAGTGACTGGCCTGGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp AAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTCCAGAAGTCTTTGCCTaGCAGCTTCATGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: KLRLHLPRARGKPTEHMLPEVFA*QLHVRE
Trigger: CTCTCTGACATGAAGCTGCAAGGCAAAGACTTCTGG...AAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS-3UTR CAA 90 bp CTGGGTGTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGAGCATCTGTTGTCCCCTaGAAACTGAGGCTTCACCTC +
Preference number: 5 (lower is better)
Translates to: LGVEPYYKYLLRTHATTRASVVP*KLRLHL
Trigger: GAGGTGAAGCCTCAGTTTCAAGGGGACAACAGATGC...TCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCACACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp AGAACCCAGGCCAGTCACTCACCACTGATTTATGGAATGGACCATATACGTATTGCATCCAGGATGCTCTaGTTGCCCTTGGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: RTQASHSPLIYGMDHIRIASRML*LPLANC
Trigger: GCAGTTGGCCAAGGGCAACAAGAGCATCCTGGATGC...AATACGTATATGGTCCATTCCATAAATCAGTGGTGAGTGACTGGCCTGGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp GTGGAACCTTATTACAAATACCTTCTGAGGACTCATGCCACCACCAGACCATGTTCAGAGGGCGTCTTCTaGGCACATGTGGGACTACCA +
Preference number: 5 (lower is better)
Translates to: VEPYYKYLLRTHATTRPCSEGVF*AHVGLP
Trigger: TGGTAGTCCCACATGTGCCAAGAAGACGCCCTCTGA...ACATGGTCTGGTGGTGGCATGAGTCCTCAGAAGGTATTTGTAATAAGGTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp TCTTGGCACATGTGGGACTACCAGGCTGTGACCCGTGCGGTACGCTATTACAGTAAGAGAACCACAACTTaGCTTCTCTGTAGACAGATC +
Preference number: 5 (lower is better)
Translates to: SWHMWDYQAVTRAVRYYSKRTTT*LLCRQI
Trigger: GATCTGTCTACAGAGAAGCAAAGTTGTGGTTCTCTT...ACTGTAATAGCGTACCGCACGGGTCACAGCCTGGTAGTCCCACATGTGCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp AGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACCGAACACATGCTTGTCATGCAGAGCATCAAACAATaGATCAATCTCTGCCTGTTC +
Preference number: 5 (lower is better)
Translates to: RLHLPRARGKPTEHMLVMQSIKQ*INLCLF
Trigger: GAACAGGCAGAGATTGATCAATTGTTTGATGCTCTG...CATGACAAGCATGTGTTCGGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566995.5
ENST00000570036.5
CDS-3UTR CAA 90 bp ACCACAACTTTGCTTCTCTGTAGACAGATCTCCCAACTTTCCCATCTGTTCCTCGTCATGACTAAGTCCTaGTCTGCATCACGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: TTTLLLCRQISQLSHLFLVMTKS*SASRSC
Trigger: GCAGGAGCGTGATGCAGACAAGGACTTAGTCATGAC...GAGGAACAGATGGGAAAGTTGGGAGATCTGTCTACAGAGAAGCAAAGTTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS TCA 90 bp GTTGCCATCCATCCCATTACAAAAACACGAAAGCAGATTCTGGCCTaGAAGCCACAGTTTGCAGACCCCTGCTCCCAACTAAACATGAAC +
Preference number: 5 (lower is better)
Translates to: VAIHPITKTRKQILA*KPQFADPCSQLNMN
Trigger: GTTCATGTTTAGTTGGGAGCAGGGGTCTGCAAACTGTGGCTTTCAGGCCAGAATCTGCTTTCGTGTTTTTGTAATGGGATGGATGGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS GCA 90 bp CATTACAAAAACACGAAAGCAGATTCTGGCCTGAAAGCCACAGTTTaGAGACCCCTGCTCCCAACTAAACATGAACCACGGGTTGTTACT +
Preference number: 5 (lower is better)
Translates to: HYKNTKADSGLKATV*RPLLPTKHEPRVVT
Trigger: AGTAACAACCCGTGGTTCATGTTTAGTTGGGAGCAGGGGTCTGCAAACTGTGGCTTTCAGGCCAGAATCTGCTTTCGTGTTTTTGTAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS-3UTR CAA 90 bp CTATTGCTAAGTGGAAGGTTTGATGAACCTCCCAGTAGAAAATGCAAGGCCTGCTTTGCATCAGTGCCTTaGCCTGTCAGGAGGGAAAAT +
Preference number: 5 (lower is better)
Translates to: LLLSGRFDEPPSRKCKACFASVP*PVRREN
Trigger: ATTTTCCCTCCTGACAGGCAAAGGCACTGATGCAAA...GCAGGCCTTGCATTTTCTACTGGGAGGTTCATCAAACCTTCCACTTAGCAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp CCTACACGATCTTCAGCATTTCAGGATCACCGGAGCTTGTTTAAAGTCAGTCTAATCCTCTGTAAACTTTaGGACTTCTCTGGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: PTRSSAFQDHRSLFKVSLILCKL*DFSGLH
Trigger: GTGAAGGCCAGAGAAGTCCAAAAGTTTACAGAGGAT...TAGACTGACTTTAAACAAGCTCCGGTGATCCTGAAATGCTGAAGATCGTGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS-3UTR CAA 90 bp AGAACAAACTATTCATTTGTGCAAACTAGGATTGCGAGTTTCTCAGAGCCAGGTAAGTCTCTTGCCATCTaGCAGCTTCATGTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RTNYSFVQTRIASFSEPGKSLAI*QLHVRE
Trigger: CTCTCTGACATGAAGCTGCAAGATGGCAAGAGACTT...ACCTGGCTCTGAGAAACTCGCAATCCTAGTTTGCACAAATGAATAGTTTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS TCA 90 bp GGTTATTACAAGGAACAGAGGAGCTTTTACGTCTTAAGCTCTTGCTaGCACAAAGGCCCCATTTACAGAGATTATAATTCCCAACCTAGC +
Preference number: 5 (lower is better)
Translates to: GYYKEQRSFYVLSSC*HKGPIYRDYNSQPS
Trigger: GCTAGGTTGGGAATTATAATCTCTGTAAATGGGGCCTTTGTGTCAGCAAGAGCTTAAGACGTAAAAGCTCCTCTGTTCCTTGTAATAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS TCA 90 bp GAGACATTCGGGCTGTTTTTATCTGATGACAGAGCATCAAACAATTaGTCAATCTCTGCCTGTTCCTCAGGAAGAAACTGTGAACAAAAG +
Preference number: 5 (lower is better)
Translates to: ETFGLFLSDDRASNN*SISACSSGRNCEQK
Trigger: CTTTTGTTCACAGTTTCTTCCTGAGGAACAGGCAGAGATTGATCAATTGTTTGATGCTCTGTCATCAGATAAAAACAGCCCGAATGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343629.11
ENST00000561807.5
ENST00000562447.5
ENST00000565079.5
ENST00000565701.1
ENST00000565765.1
ENST00000566995.5
ENST00000570036.5
CDS TCA 90 bp TCCTCTGATGTTCATCTCAAGTTAGAAATGTCCCCAAATGTCGTGTaGATCATTCATTATCTACTCCAGGTTCCTTTCTGTAGTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SSDVHLKLEMSPNVV*IIHYLLQVPFCSAF
Trigger: GAAGGCACTACAGAAAGGAACCTGGAGTAGATAATGAATGATTCACACGACATTTGGGGACATTTCTAACTTGAGATGAACATCAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS-3UTR CAA 90 bp ACCACTGATTTATGGAATGGACCATATACGTATTTATCAACCAAGTTCCCAAACCCTGAGTCAGGGCTATaGCTAAGTGGAAGGTTTGAT +
Preference number: 5 (lower is better)
Translates to: TTDLWNGPYTYLSTKFPNPESGL*LSGRFD
Trigger: ATCAAACCTTCCACTTAGCAATAGCCCTGACTCAGG...GTTTGGGAACTTGGTTGATAAATACGTATATGGTCCATTCCATAAATCAGTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343629.11
CDS GCA 72 bp TGGGTGACAGAGCAAGACTCCTGCCGGGCTTCCTGGTaGTGTCCGGTCCGGTCCAGCAGCCCACGGGCTCCT +
Preference number: 6 (lower is better)
Translates to: WVTEQDSCRASW*CPVRSSSPRAP
Trigger: AGGAGCCCGTGGGCTGCTGGACCGGACCGGACAGCACCAGGAAGCCCGGCAGGAGTCTTGCTCTGTCACCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561807.5
CDS CCA 72 bp GAACAGTTATCAGCTCACTGTCCCTGCCGGGCTTCCTaGTGCTGTCCGGTCCGGTCCAGCAGCCCACGGGCT +
Preference number: 6 (lower is better)
Translates to: EQLSAHCPCRAS*CCPVRSSSPRA
Trigger: AGCCCGTGGGCTGCTGGACCGGACCGGACAGCACCAGGAAGCCCGGCAGGGACAGTGAGCTGATAACTGTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565765.1
CDS GCA 72 bp CTACACCTGGAGCCGCTCATCCAAGGGCGTCGGTCCTaGCAAGGTCACTGGAAGGGGAATGTTCCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LHLEPLIQGRRS*QGHWKGNVPSQ
Trigger: CTGGCTGGGAACATTCCCCTTCCAGTGACCTTGGCAGGACCGACGCCCTTGGATGAGCGGCTCCAGGTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CAA 72 bp TTACCATCTCCTGGTCCCCTCGGAGGCATCTGTGGCTaGACTTCTCCCACGCCCCATAGACCCGGCACCGTG +
Preference number: 6 (lower is better)
Translates to: LPSPGPLGGICG*TSPTPHRPGTV
Trigger: CACGGTGCCGGGTCTATGGGGCGTGGGAGAAGTCAAGCCACAGATGCCTCCGAGGGGACCAGGAGATGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS TCA 72 bp TGGCAGTGCCCTGGCAATGGGGCTGGAATAAATGCCTaGGCTACACCTGGAGCCGCTCATCCAAGGGCGTCG +
Preference number: 6 (lower is better)
Translates to: WQCPGNGAGINA*ATPGAAHPRAS
Trigger: CGACGCCCTTGGATGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS TCA 72 bp CCGGCACCGTGTAATAACTGGGCCCGTGTCCTCGCCTaGAAACTGGGGGTCACACGGCCTGTCCTGAAGAAC +
Preference number: 6 (lower is better)
Translates to: PAPCNNWARVLA*KLGVTRPVLKN
Trigger: GTTCTTCAGGACAGGCCGTGTGACCCCCAGTTTTCAGGCGAGGACACGGGCCCAGTTATTACACGGTGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp CCGCACCTGCCTCCAGGCACCCACGAAGCTGGAGACTaGACACTCATATCCGCACAACCTTGCCTGCCAAGA +
Preference number: 6 (lower is better)
Translates to: PHLPPGTHEAGD*TLISAQPCLPR
Trigger: TCTTGGCAGGCAAGGTTGTGCGGATATGAGTGTCCAGTCTCCAGCTTCGTGGGTGCCTGGAGGCAGGTGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565079.5
CDS GCA 72 bp GAGATGGCAGTGCCCTGGCAATGGGGCTGGAATAAATaGCTGAGCTACACCTGGAGCCGCTCATCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: EMAVPWQWGWNK*LSYTWSRSSKG
Trigger: GCCCTTGGATGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp TGGCAATGGGGCTGGAATAAATGCCTGAGCTACACCTaGAGCCGCTCATCCAAGGGCGTCGGTCCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: WQWGWNKCLSYT*SRSSKGVGPAK
Trigger: CTTGGCAGGACCGACGCCCTTGGATGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp GAACCCCTCGAGATGGCAGTGCCCTGGCAATGGGGCTaGAATAAATGCCTGAGCTACACCTGGAGCCGCTCA +
Preference number: 6 (lower is better)
Translates to: EPLEMAVPWQWG*NKCLSYTWSRS
Trigger: TGAGCGGCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp CCTCACCCACTAAGAGTGGAGGTGACAGTAAGAGCGTaGGAGCACACACCTGGGACTCGAACAGCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: PHPLRVEVTVRA*EHTPGTRTAGF
Trigger: GAAGCCAGCTGTTCGAGTCCCAGGTGTGTGCTCCCACGCTCTTACTGTCACCTCCACTCTTAGTGGGTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp ATTCTCTCCGCACCTGCCTCCAGGCACCCACGAAGCTaGAGACTGGACACTCATATCCGCACAACCTTGCCT +
Preference number: 6 (lower is better)
Translates to: ILSAPASRHPRS*RLDTHIRTTLP
Trigger: AGGCAAGGTTGTGCGGATATGAGTGTCCAGTCTCCAGCTTCGTGGGTGCCTGGAGGCAGGTGCGGAGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565079.5
CDS CAA 72 bp CATAGTCCAGCCACTGGGGCCCCAGAAGTCTTTGCCTaGCAGCTTCATGTCAGAGAGCAGCTGAGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: HSPATGAPEVFA*QLHVREQLSSQ
Trigger: CTGGCTGCTCAGCTGCTCTCTGACATGAAGCTGCAAGGCAAAGACTTCTGGGGCCCCAGTGGCTGGACTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS CAA 90 bp GAGCCCTATTTAGCACCCCCACCCTCTCCCTTTCTCCAGAGCTCTTaGCCCGTGCTGTGCCACTCGTCAAGGTTCAGGACACCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: EPYLAPPPSPFLQSS*PVLCHSSRFRTPSL
Trigger: AAGACTTGGTGTCCTGAACCTTGACGAGTGGCACAGCACGGGCAAAGAGCTCTGGAGAAAGGGAGAGGGTGGGGGTGCTAAATAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS GCA 72 bp ATCTGTCCTGATATCTGGCAGAATTCTCTCCGCACCTaGCTCCAGGCACCCACGAAGCTGGAGACTGGACAC +
Preference number: 6 (lower is better)
Translates to: ICPDIWQNSLRT*LQAPTKLETGH
Trigger: GTGTCCAGTCTCCAGCTTCGTGGGTGCCTGGAGGCAGGTGCGGAGAGAATTCTGCCAGATATCAGGACAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565079.5
CDS CCA 72 bp CTCCCCACAAGCTGGGGAGATTCCAACTGCCTCATCTaGACAGGCTTCGAAGTCCTGTCTGTGTCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: LPTSWGDSNCLI*TGFEVLSVSQS
Trigger: GCTCTGAGACACAGACAGGACTTCGAAGCCTGTCCAGATGAGGCAGTTGGAATCTCCCCAGCTTGTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565765.1
ENST00000566995.5
CDS CCA 72 bp AAGAGCGTGGGAGCACACACCTGGGACTCGAACAGCTaGCTTCAAACCCGAGCTCAGGAACAGCATGACCTT +
Preference number: 6 (lower is better)
Translates to: KSVGAHTWDSNS*LQTRAQEQHDL
Trigger: AAGGTCATGCTGTTCCTGAGCTCGGGTTTGAAGCCAGCTGTTCGAGTCCCAGGTGTGTGCTCCCACGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CAA 90 bp CCCGTGCTGTGCCACTCGTCAAGGTTCAGGACACCAAGTCTTACCTaGAAACTGAGGCTTCACCTCCCAAGAGCAAGAGGCAAACCCACC +
Preference number: 6 (lower is better)
Translates to: PVLCHSSRFRTPSLT*KLRLHLPRARGKPT
Trigger: GGTGGGTTTGCCTCTTGCTCTTGGGAGGTGAAGCCTCAGTTTCAAGGTAAGACTTGGTGTCCTGAACCTTGACGAGTGGCACAGCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS TCA 72 bp GAACAGCTGGCTTCAAACCCGAGCTCAGGAACAGCATaGCCTTGCCAAGGTCTGGACCTCTGTGCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: EQLASNPSSGTA*PCQGLDLCASV
Trigger: AACTGAGGCACAGAGGTCCAGACCTTGGCAAGGTCATGCTGTTCCTGAGCTCGGGTTTGAAGCCAGCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS GCA 72 bp GGCAGAATTCTCCCCACAAGCTGGGGAGATTCCAACTaGCTCATCTGGACAGGCTTCGAAGTCCTGTCTGTG +
Preference number: 6 (lower is better)
Translates to: GRILPTSWGDSN*LIWTGFEVLSV
Trigger: CACAGACAGGACTTCGAAGCCTGTCCAGATGAGGCAGTTGGAATCTCCCCAGCTTGTGGGGAGAATTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566995.5
CDS GCA 72 bp AGAGCAAGACTCCCCACAAGCTGGGGAGATTCCAACTaGCTCATCTGGACAGGCTTCGAAGTCCTGTCTGTG +
Preference number: 6 (lower is better)
Translates to: RARLPTSWGDSN*LIWTGFEVLSV
Trigger: CACAGACAGGACTTCGAAGCCTGTCCAGATGAGGCAGTTGGAATCTCCCCAGCTTGTGGGGAGTCTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565765.1
CDS CCA 72 bp ATTTCAGAACCCCTCGAGATGGCAGTGCCCTGGCAATaGGGCTGGAATAAATGCCTGAGCTACACCTGGAGC +
Preference number: 6 (lower is better)
Translates to: ISEPLEMAVPWQ*GWNKCLSYTWS
Trigger: GCTCCAGGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGGGTTCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp AGCAGCATTTCAGAACCCCTCGAGATGGCAGTGCCCTaGCAATGGGGCTGGAATAAATGCCTGAGCTACACC +
Preference number: 6 (lower is better)
Translates to: SSISEPLEMAVP*QWGWNKCLSYT
Trigger: GGTGTAGCTCAGGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGGGTTCTGAAATGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp TCTCCTCTCCAAGCAGCATTTCAGAACCCCTCGAGATaGCAGTGCCCTGGCAATGGGGCTGGAATAAATGCC +
Preference number: 6 (lower is better)
Translates to: SPLQAAFQNPSR*QCPGNGAGINA
Trigger: GGCATTTATTCCAGCCCCATTGCCAGGGCACTGCCATCTCGAGGGGTTCTGAAATGCTGCTTGGAGAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp CTGGTAGGGCACTTCCTGGGACTCCTGCAGTTTATCTaGGAAGTGCGGGTTTCATTCGCCACTAATCAGGCT +
Preference number: 6 (lower is better)
Translates to: LVGHFLGLLQFI*EVRVSFATNQA
Trigger: AGCCTGATTAGTGGCGAATGAAACCCGCACTTCCCAGATAAACTGCAGGAGTCCCAGGAAGTGCCCTACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CCA 72 bp CCTGATATCTGGCAGAATTCTCTCAGCCGGGTGTGGTaGCGTGTGACTATAGTTCCAGCTATTCAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: PDIWQNSLSRVW*RVTIVPAIQEA
Trigger: AGCCTCCTGAATAGCTGGAACTATAGTCACACGCCACCACACCCGGCTGAGAGAATTCTGCCAGATATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561807.5
ENST00000565765.1
CDS CAA 72 bp GCAGACCCCTGCTCCCAACTAAACATGAACCACGGGTaGTTACTCTTGCCTGTAGTGCCTTCAGAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: ADPCSQLNMNHG*LLLPVVPSERR
Trigger: CCTTCTCTCTGAAGGCACTACAGGCAAGAGTAACAACCCGTGGTTCATGTTTAGTTGGGAGCAGGGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS GCA 72 bp AACACGAAAGCAGATTCTGGCCTGAAAGCCACAGTTTaGAGACCCCTGCTCCCAACTAAACATGAACCACGG +
Preference number: 6 (lower is better)
Translates to: NTKADSGLKATV*RPLLPTKHEPR
Trigger: CCGTGGTTCATGTTTAGTTGGGAGCAGGGGTCTGCAAACTGTGGCTTTCAGGCCAGAATCTGCTTTCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS CCA 72 bp TGTCCTGATATCTGGCAGAATTCTCTCAGCCGGGTGTaGTGGCGTGTGACTATAGTTCCAGCTATTCAGGAG +
Preference number: 6 (lower is better)
Translates to: CPDIWQNSLSRV*WRVTIVPAIQE
Trigger: CTCCTGAATAGCTGGAACTATAGTCACACGCCACCACACCCGGCTGAGAGAATTCTGCCAGATATCAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561807.5
ENST00000565765.1
CDS CCA 72 bp AAGGAAAATGTCCGATCTGAACCAATTACCATCTCCTaGTCCCCTCGGAGGCATCTGTGGCTTGACTTCTCC +
Preference number: 6 (lower is better)
Translates to: KENVRSEPITIS*SPRRHLWLDFS
Trigger: GGAGAAGTCAAGCCACAGATGCCTCCGAGGGGACCAGGAGATGGTAATTGGTTCAGATCGGACATTTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CAA 90 bp GCAGACCCCTGCTCCCAACTAAACATGAACCACGGGTTGTTACTCTaGCCTGTAGTGCCTTCAGAGAGAAGGATTTGGATGAGACATTCG +
Preference number: 6 (lower is better)
Translates to: ADPCSQLNMNHGLLL*PVVPSERRIWMRHS
Trigger: CGAATGTCTCATCCAAATCCTTCTCTCTGAAGGCACTACAGGCAAGAGTAACAACCCGTGGTTCATGTTTAGTTGGGAGCAGGGGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS CAA 90 bp CCACAGTTTGCAGACCCCTGCTCCCAACTAAACATGAACCACGGGTaGTTACTCTTGCCTGTAGTGCCTTCAGAGAGAAGGATTTGGATG +
Preference number: 6 (lower is better)
Translates to: PQFADPCSQLNMNHG*LLLPVVPSERRIWM
Trigger: CATCCAAATCCTTCTCTCTGAAGGCACTACAGGCAAGAGTAACAACCCGTGGTTCATGTTTAGTTGGGAGCAGGGGTCTGCAAACTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS TCA 72 bp TTGATCAATCTCTGCCTGTTCCTCAGGAAGAAACTGTaGACAAAAGCTCCGCCCCACACGGCTTCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: LINLCLFLRKKL*TKAPPHTASAV
Trigger: AACAGCAGAAGCCGTGTGGGGCGGAGCTTTTGTTCACAGTTTCTTCCTGAGGAACAGGCAGAGATTGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343629.11
ENST00000561807.5
ENST00000562447.5
ENST00000565079.5
ENST00000565701.1
ENST00000565765.1
ENST00000566995.5
ENST00000570036.5
CDS GCA 72 bp AGGAACAGCATGACCTTGCCAAGGTCTGGACCTCTGTaGCTCAGTTTCCTCAGGTATAAAATGGAGGTAAGG +
Preference number: 6 (lower is better)
Translates to: RNSMTLPRSGPL*LSFLRYKMEVR
Trigger: CCTTACCTCCATTTTATACCTGAGGAAACTGAGGCACAGAGGTCCAGACCTTGGCAAGGTCATGCTGTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS GCA 72 bp GGCACTTCCTGGGACTCCTGCAGTTTATCTGGGAAGTaGGGGTTTCATTCGCCACTAATCAGGCTTAATCAT +
Preference number: 6 (lower is better)
Translates to: GTSWDSCSLSGK*GFHSPLIRLNH
Trigger: ATGATTAAGCCTGATTAGTGGCGAATGAAACCCGCACTTCCCAGATAAACTGCAGGAGTCCCAGGAAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CAA 90 bp CCACGGGTTGTTACTCTTGCCTGTAGTGCCTTCAGAGAGAAGGATTaGGATGAGACATTCGGGCTGTTTTTATCTGATGACAGAGCATCA +
Preference number: 6 (lower is better)
Translates to: PRVVTLACSAFREKD*DETFGLFLSDDRAS
Trigger: TGATGCTCTGTCATCAGATAAAAACAGCCCGAATGTCTCATCCAAATCCTTCTCTCTGAAGGCACTACAGGCAAGAGTAACAACCCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS CAA 72 bp TGCTCCCAACTAAACATGAACCACGGGTTGTTACTCTaGCCTGTAGTGCCTTCAGAGAGAAGGATTTGGATG +
Preference number: 6 (lower is better)
Translates to: CSQLNMNHGLLL*PVVPSERRIWM
Trigger: CATCCAAATCCTTCTCTCTGAAGGCACTACAGGCAAGAGTAACAACCCGTGGTTCATGTTTAGTTGGGAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS CAA 72 bp GCAATTACTGAGCACAGAAAACAGGGCTCGTGTGAATaGAGAGGTGCCGTCAGTGTAAAAGGCACACTTGAT +
Preference number: 6 (lower is better)
Translates to: AITEHRKQGSCE*RGAVSVKGTLD
Trigger: ATCAAGTGTGCCTTTTACACTGACGGCACCTCTCAATTCACACGAGCCCTGTTTTCTGTGCTCAGTAATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS TCA 72 bp AAAACTGGGGGTCACACGGCCTGTCCTGAAGAACTCTaGTGTGATAAACACCATAGAGCAGCATCACATTTT +
Preference number: 6 (lower is better)
Translates to: KTGGHTACPEEL*CDKHHRAASHF
Trigger: AAAATGTGATGCTGCTCTATGGTGTTTATCACATCAGAGTTCTTCAGGACAGGCCGTGTGACCCCCAGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567321.1
CDS CAA 72 bp GTTACTCTTGCCTGTAGTGCCTTCAGAGAGAAGGATTaGGATGAGACATTCGGGCTGTTTTTATCTGATGAC +
Preference number: 6 (lower is better)
Translates to: VTLACSAFREKD*DETFGLFLSDD
Trigger: GTCATCAGATAAAAACAGCCCGAATGTCTCATCCAAATCCTTCTCTCTGAAGGCACTACAGGCAAGAGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565701.1
CDS CAA 72 bp CAGGTTCCTTTCTGTAGTGCCTTCAGAGAGAAGGATTaGGATGAGACATTCGGGCTGTTTTTATCTGATGAC +
Preference number: 6 (lower is better)
Translates to: QVPFCSAFREKD*DETFGLFLSDD
Trigger: GTCATCAGATAAAAACAGCCCGAATGTCTCATCCAAATCCTTCTCTCTGAAGGCACTACAGAAAGGAACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570036.5
CDS TCA 72 bp GGGCTGTTTTTATCTGATGACAGAGCATCAAACAATTaGTCAATCTCTGCCTGTTCCTCAGGAAGAAACTGT +
Preference number: 6 (lower is better)
Translates to: GLFLSDDRASNN*SISACSSGRNC
Trigger: ACAGTTTCTTCCTGAGGAACAGGCAGAGATTGATCAATTGTTTGATGCTCTGTCATCAGATAAAAACAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343629.11
ENST00000561807.5
ENST00000562447.5
ENST00000565079.5
ENST00000565701.1
ENST00000565765.1
ENST00000566995.5
ENST00000570036.5
CDS TCA 72 bp AAGGAACAGAGGAGCTTTTACGTCTTAAGCTCTTGCTaGCACAAAGGCCCCATTTACAGAGATTATAATTCC +
Preference number: 6 (lower is better)
Translates to: KEQRSFYVLSSC*HKGPIYRDYNS
Trigger: GGAATTATAATCTCTGTAAATGGGGCCTTTGTGTCAGCAAGAGCTTAAGACGTAAAAGCTCCTCTGTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567321.1