Pregenerated sensors for MDK (Homo sapiens)
Ensembl gene IDs: ENSG00000110492Ensembl transcript IDs: ENST00000359803.7, ENST00000395565.5, ENST00000395566.9, ENST00000395569.8, ENST00000405308.6, ENST00000407067.1, ENST00000441869.5, ENST00000481047.1, ENST00000489525.5, ENST00000490240.5, ENST00000533283.5, ENST00000533952.5, ENST00000617138.4
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGGCACTGGTGGGTCACATCTCGGGCCTGGGAGAGGGAGGGCGTaGGCCAGGCCCCATGTGACACCAGGGGCTCCTTGGCATCCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: EGTGGSHLGPGRGRA*ARPHVTPGAPWHPG Trigger: GCCTGGATGCCAAGGAGCCCCTGGTGTCACATGGGGCCTGGCCCACGCCCTCCCTCTCCCAGGCCCGAGATGTGACCCACCAGTGCCTTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000395569.8 ENST00000405308.6 ENST00000407067.1 ENST00000489525.5 |
||
| 3UTR TCA 90 bp | CTAGAAAGGGCAGAGCTGACCAAATGCTGCCCGTGGCTGGAGAGCTaGCAAAGGCAAGCCGTTCCAGGACACTCTCCCTGGGTCCTAAGC | + |
|
Preference number: 1 (lower is better) Translates to: LERAELTKCCPWLES*QRQAVPGHSPWVLS Trigger: GCTTAGGACCCAGGGAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATTTGGTCAGCTCTGCCCTTTCTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR TCA 90 bp | TCTTGTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTaGGGCGATGTCAGGAAGCCACTGGCCAGGACTCAAAACTTAAGG | + |
|
Preference number: 1 (lower is better) Translates to: SCSAHLQTFPGREAK*GDVRKPLARTQNLR Trigger: CCTTAAGTTTTGAGTCCTGGCCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTACAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCGGGCCAGGCCCCATGTaGCACCAGGGGCTCCTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VTPGAPWHPGLASSPFPSGPGPM*HQGLLG Trigger: GCCAAGGAGCCCCTGGTGTCACATGGGGCCTGGCCC...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR CAA 90 bp | TGGGCCAGGCCCCATGTGACACCAGGGGCTCCTTGGCATCCAGGCTaGGCGTCTAGTCCTTTCCCTTCCCTTTCTTGGCTGAGAAGCGGG | + |
|
Preference number: 2 (lower is better) Translates to: WARPHVTPGAPWHPG*ASSPFPSLSWLRSG Trigger: CCCGCTTCTCAGCCAAGAAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCACATGGGGCCTGGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR TCA 90 bp | TTCCCTTTCTTGGCTGAGAAGCGGGCAGATTCACCCCTGCCCTGCTGGCCTCGCCCGTGGCTGGAGAGCTaGCAAAGGCAAGCCGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: FPFLAEKRADSPLPCWPRPWLES*QRQAVP Trigger: TGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGG...GCGAGGCCAGCAGGGCAGGGGTGAATCTGCCCGCTTCTCAGCCAAGAAAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCTTTCTTGGCTGAGAAGCGGGCAGATTCACCCCTGCCCTGCTGGCCTCGCGCAGAGCTGACCAAATaGTGCCCGTGGCTGGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: FPFLAEKRADSPLPCWPRAELTK*CPWLES Trigger: GCTCTCCAGCCACGGGCAGCATTTGGTCAGCTCTGC...GCGAGGCCAGCAGGGCAGGGGTGAATCTGCCCGCTTCTCAGCCAAGAAAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGATTTATGTCCCCAGCATCACCTGCGGCCTCTCTTGTAGTGCCCATCTTCGTCACATCTCGGGCCTaGGAGAGGGAGGGCGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GGFMSPASPAASLVVPIFVTSRA*EREGVG Trigger: GCCCACGCCCTCCCTCTCCCAGGCCCGAGATGTGAC...GAAGATGGGCACTACAAGAGAGGCCGCAGGTGATGCTGGGGACATAAATCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTGACAGAAGGCACTGGTaGGTCACATCTCGGGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFDRRHW*VTSRAW Trigger: CCAGGCCCGAGATGTGACCCACCAGTGCCTTCTGTC...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTCTTGGCGCAGACAGAAGGCACTaGTGGGTCACATCTCGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GLLGIQAWRLVLSLPFLGADRRH*WVTSRA Trigger: GGCCCGAGATGTGACCCACCAGTGCCTTCTGTCTGC...GCCAAGAAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCCAGGACACTCTCCCTaGGTCCTAAGCCAGATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VTPGAPWHPGLASSPFPSPGHSP*VLSQML Trigger: GAGCATCTGGCTTAGGACCCAGGGAGAGTGTCCTGG...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR GCA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTCTGGGACTCACATTaGTTTGGGGGAGGCTCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: VTPGAPWHPGLASSPFPSLWDSH*FGGGSS Trigger: GCTTGAGCCTCCCCCAAAGCAATGTGAGTCCCAGAG...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR CCA 90 bp | TTCCCTTTCTTGGCTGAGAAGCGGGCAGATTCACCCCTGCCCTGCTGGCCTCGCAACAAAAGCGGGCTCTaGGACTCACATTGCTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: FPFLAEKRADSPLPCWPRNKSGL*DSHCFG Trigger: CCCAAAGCAATGTGAGTCCCAGAGCCCGCTTTTGTT...GCGAGGCCAGCAGGGCAGGGGTGAATCTGCCCGCTTCTCAGCCAAGAAAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR TCA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCGGACAAGGCAGGGCATaGTTGATTAAAGCTAACGAG | + |
|
Preference number: 2 (lower is better) Translates to: VTPGAPWHPGLASSPFPSGQGRA*LIKANE Trigger: CTCGTTAGCTTTAATCAATCATGCCCTGCCTTGTCC...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR CAA 90 bp | GGACACTCTCCCTGGGTCCTAAGCCAGATGCTCCAATGGAGTAGTTaGAGTTGGTCCCTATTTGGGCCAGGGAGGATTTATGTCCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GHSPWVLSQMLQWSS*SWSLFGPGRIYVPS Trigger: GCTGGGGACATAAATCCTCCCTGGCCCAAATAGGGACCAACTCAAACTACTCCATTGGAGCATCTGGCTTAGGACCCAGGGAGAGTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR TCA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTTCCAATGGAGTAGTTTaGGTTGGTCCCTATTTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFSNGVV*VGPYLG Trigger: GCCCAAATAGGGACCAACTCAAACTACTCCATTGGA...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTGAGTTGGTCCCTATTTaGGCCAGGGAGGATTTATGT | + |
|
Preference number: 2 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFELVPI*AREDLC Trigger: ACATAAATCCTCCCTGGCCCAAATAGGGACCAACTC...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTCTTGGCTTAGTAATGGAATTGTaGGGAAGAACAAAAGCGGGC | + |
|
Preference number: 2 (lower is better) Translates to: GLLGIQAWRLVLSLPFLGLVMEL*GRTKAG Trigger: GCCCGCTTTTGTTCTTCCCCACAATTCCATTACTAA...GCCAAGAAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR CCA 72 bp | GCGTGGGCCAGGCCCCATGTGACACCAGGGGCTCCTTaGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AWARPHVTPGAP*HPGLASSPFPS Trigger: GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCACATGGGGCCTGGCCCACGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR TCA 72 bp | GCAGAGCTGACCAAATGCTGCCCGTGGCTGGAGAGCTaGCAAAGGCAAGCCGTTCCAGGACACTCTCCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: AELTKCCPWLES*QRQAVPGHSPW Trigger: CCAGGGAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATTTGGTCAGCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTCTTGGCGCTCTGGGACTCACATaGCTTTGGGGGAGGCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLLGIQAWRLVLSLPFLGALGLT*LWGRLK Trigger: CTTGAGCCTCCCCCAAAGCAATGTGAGTCCCAGAGC...GCCAAGAAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTTCTTGGCTGAGAAGCGGGCAGATTCACCCCTGCCCTGCTGGCCTCGCGGGCCAGGCCCCATGTaGCACCAGGGGCTCCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPFLAEKRADSPLPCWPRGPGPM*HQGLLG Trigger: GCCAAGGAGCCCCTGGTGTCACATGGGGCCTGGCCC...GCGAGGCCAGCAGGGCAGGGGTGAATCTGCCCGCTTCTCAGCCAAGAAAGGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | AATGCTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCTGGCGACCGCGGAGGTaGGCGCCAGCAGGGCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NAARGWRADKGKPFQDTLWRPRR*APAGRG Trigger: TCCTCGCCCTGCTGGCGCTCACCTCCGCGGTCGCCA...GAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | AATGCTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCGCACCCTGCACCGGATaGGCTGGGTCTGGGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NAARGWRADKGKPFQDTLAPCTG*AGSGPR Trigger: GCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGC...GAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTGCACCGGATGCGCTaGGTCTGGGCCCCGCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VTPGAPWHPGLASSPFPSLHRMR*VWAPQV Trigger: CACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAG...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | CTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGCCAGGATCTGGGCCCCGCAGGTaGCCTCGCGGAAACCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LFQAGKPSEAMSGSHWPGSGPRR*PRGNPR Trigger: GCGTGGGTTTCCGCGAGGGCACCTGCGGGGCCCAGA...TCCTGGCCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | TTCCCTTTCTTGGCTGAGAAGCGGGCAGATTCACCCCTGCCCTGCTGGCCTCGCCTGGCCTCGCTGGGCTaGGTCACGAGTGAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FPFLAEKRADSPLPCWPRLASLG*VTSELR Trigger: TCTCAGCTCACTCGTGACTCAGCCCAGCGAGGCCAG...GCGAGGCCAGCAGGGCAGGGGTGAATCTGCCCGCTTCTCAGCCAAGAAAGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTCCACGCCGCAATCCTTaGTGCTGGGGGTGCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFPRRNP*CWGCRA Trigger: GGCCCTGCACCCCCAGCAGCAAGGATTGCGGCGTGG...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | GGAGGATTTATGTCCCCAGCATCACCTGCGGCCTCTCTTGTAGTGCCCATCTTCCGGATGCGCTGGGTCTaGGCCCCGCAGGTGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GGFMSPASPAASLVVPIFRMRWV*APQVPS Trigger: CGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCG...GAAGATGGGCACTACAAGAGAGGCCGCAGGTGATGCTGGGGACATAAATCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCTCACCCCTGCCCTGCTaGCCTCGCTGGGCTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VTPGAPWHPGLASSPFPSSPLPC*PRWAES Trigger: TGACTCAGCCCAGCGAGGCCAGCAGGGCAGGGGTGA...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCGCCCAGGGTGGGCCTTaGCCTCCTCCCAACACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTPGAPWHPGLASSPFPSAQGGP*PPPNTR Trigger: TCTAGTGTTGGGAGGAGGTCAAGGCCCACCCTGGGC...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGCGCCGCAATCCTTGCTaGTGGGGGTGCAGGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRLFQAGKPSEAMSGSHWRRNPC*WGCRAP Trigger: GGGGGCCCTGCACCCCCAGCAGCAAGGATTGCGGCG...CCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | CTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCCCTGCTTGGCGGACTTTGGTaGCTGTGCCCCCATCACACG | + |
|
Preference number: 4 (lower is better) Translates to: LPVAGELTKASRSRTLSLLGGLW*LCPHHT Trigger: CGTGTGATGGGGGCACAGGCACCAAAGTCCGCCAAG...CAGGGAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | AATGCTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCCCCTGCTGGCCTCGCTaGGCTGAGTCACGAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NAARGWRADKGKPFQDTLPCWPR*AESRVS Trigger: GCTCACTCGTGACTCAGCCCAGCGAGGCCAGCAGGG...GAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | GCGGCCTCTCTTGTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTGGGTGCAGGGCTTGGTaGCGCGGATGGTCTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AASLVVPIFRLFQAGKPSGCRAW*RGWSPG Trigger: GCCAGGAGACCATCCGCGTCACCAAGCCCTGCACCC...ACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTACAAGAGAGGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTAGTTGCAGGGCACCCTaGACCGGATGCGCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFSCRAP*TGCAGS Trigger: AGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACT...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCGCAGAGCTGACCAAATaGTGCCCGTGGCTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTPGAPWHPGLASSPFPSAELTK*CPWLES Trigger: GCTCTCCAGCCACGGGCAGCATTTGGTCAGCTCTGC...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGGTCACATCTCGGGCCTaGGAGAGGGAGGGCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLFQAGKPSEAMSGSHWVTSRA*EREGVG Trigger: GCCCACGCCCTCCCTCTCCCAGGCCCGAGATGTGAC...CCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | GGAGGATTTATGTCCCCAGCATCACCTGCGGCCTCTCTTGTAGTGCCCATCTTCGATTCACCCCTGCCCTaGTGGCCTCGCTGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGFMSPASPAASLVVPIFDSPLP*WPRWAE Trigger: CTCAGCCCAGCGAGGCCAGCAGGGCAGGGGTGAATC...GAAGATGGGCACTACAAGAGAGGCCGCAGGTGATGCTGGGGACATAAATCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTCTTGGCTGAGAAGCGGGCAGATTCACCCCTGCCCTGCTGGCCTCGCTTCTTCAGGGTGCCTTaGCGGACTTTGGTGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPFLAEKRADSPLPCWPRFFRVP*RTLVPV Trigger: CACAGGCACCAAAGTCCGCCAAGGCACCCTGAAGAA...GCGAGGCCAGCAGGGCAGGGGTGAATCTGCCCGCTTCTCAGCCAAGAAAGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTCTTGGCGACAGAAGGCACTGGTaGGTCACATCTCGGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGIQAWRLVLSLPFLGDRRHW*VTSRAW Trigger: CCAGGCCCGAGATGTGACCCACCAGTGCCTTCTGTC...GCCAAGAAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTACTCCTTCTTCCAGTTaGAGGGCACCCTGCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFTPSSS*RAPCTG Trigger: TCCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGAGT...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | TTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGGGACTTTGGTGCCTGTaGCCCCATCACACGCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRLFQAGKPSEAMSGSHWGLWCL*PHHTHP Trigger: GGGGTGCGTGTGATGGGGGCACAGGCACCAAAGTCC...CCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCTTTCTTGGCTGAGAAGCGGGCAGATTCACCCCTGCCCTGCTGGCCTCGCCTTGGCATCCAGGCTTaGCGTCTAGTCCTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPFLAEKRADSPLPCWPRLGIQA*RLVLSL Trigger: AAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAG...GCGAGGCCAGCAGGGCAGGGGTGAATCTGCCCGCTTCTCAGCCAAGAAAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTCCAGGACACTCTCCCTaGGTCCTAAGCCAGATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFPGHSP*VLSQML Trigger: GAGCATCTGGCTTAGGACCCAGGGAGAGTGTCCTGG...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | AATGCTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCGGACTCACATTGCTTTaGGGGAGGCTCAAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NAARGWRADKGKPFQDTLGLTLL*GRLKLP Trigger: GGGAAGCTTGAGCCTCCCCCAAAGCAATGTGAGTCC...GAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | CTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCCCTGAACAAAAGCGGGCTCTaGGACTCACATTGCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVAGELTKASRSRTLSLNKSGL*DSHCFG Trigger: CCCAAAGCAATGTGAGTCCCAGAGCCCGCTTTTGTT...CAGGGAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | GGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTCTTGGCAATGCTGCCCGTGGCTaGAGAGCTGACAAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGIQAWRLVLSLPFLGNAARG*RADKGK Trigger: CTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATT...GCCAAGAAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | AATGCTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCCCCTTCTCCTTTCGCTaGCCTTTGGCCTTTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NAARGWRADKGKPFQDTLPFSFR*PLAFAL Trigger: CAAAGCAAAGGCCAAAGGTCAGCGAAAGGAGAAGGG...GAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | ATCACCTGCGGCCTCTCTTGTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGGCAGGGAAGCCAAGTaGGGCGATGTCAGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITCGLSCSAHLQTFPGREGREAK*GDVRKP Trigger: TGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCC...TTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTACAAGAGAGGCCGCAGGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGCCAGGACTCAAAACTTAAGCCGTGGCTGGAGAGCTaGCAAAGGCAAGCCGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQVRRCQEATGQDSKLKPWLES*QRQAVP Trigger: TGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGG...CTTAAGTTTTGAGTCCTGGCCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTTGTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGGCGCCTTCTTCAGGGTaGCTTGGCGGACTTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLVVPIFRLFQAGKPSEAAPSSG*LGGLWC Trigger: GCACCAAAGTCCGCCAAGGCACCCTGAAGAAGGCGC...CGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTACAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | TCTCTTGTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGACACCAGGGGCTCCTTaGCATCCAGGCTTGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVVPIFRLFQAGKPSEATPGAP*HPGLAS Trigger: AGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGT...CGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTACAAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | GTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGCAGACAGAAGGCACTaGTGGGTCACATCTCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVPIFRLFQAGKPSEAMSADRRH*WVTSRA Trigger: GGCCCGAGATGTGACCCACCAGTGCCTTCTGTCTGC...TGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | CTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCCCTGTCTCAAACTTGTACTTaGAGTCGGCTCCAAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPVAGELTKASRSRTLSLSQTCT*SRLQTP Trigger: AGGAGTTTGGAGCCGACTGCAAGTACAAGTTTGAGA...CAGGGAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR GCA 90 bp | GCGGCCTCTCTTGTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTCTCTGGGACTCACATTaGTTTGGGGGAGGCTCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AASLVVPIFRLFQAGKPSLWDSH*FGGGSS Trigger: GCTTGAGCCTCCCCCAAAGCAATGTGAGTCCCAGAG...ACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTACAAGAGAGGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | GGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCCCTGGGTCCTAAGCCAGGACAAGGCAGGGCATaGTTGATTAAAGCTAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: GELTKASRSRTLSLGPKPGQGRA*LIKANE Trigger: CTCGTTAGCTTTAATCAATCATGCCCTGCCTTGTCC...TGGCTTAGGACCCAGGGAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGCCTTTCGCTGACCTTTaGCCTTTGCTTTGGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FRLFQAGKPSEAMSGSHWPFADL*PLLWSW Trigger: CCAAGACCAAAGCAAAGGCCAAAGGTCAGCGAAAGG...CCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGTTCCCTTCCCTTTCTTaGCTGAGAAGCGGGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: FRLFQAGKPSEAMSGSHWFPSLS*LRSGQI Trigger: AATCTGCCCGCTTCTCAGCCAAGAAAGGGAAGGGAA...CCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTTTAGTAATGGAATTGTaGGGAAGAACAAAAGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFLVMEL*GRTKAG Trigger: GCCCGCTTTTGTTCTTCCCCACAATTCCATTACTAA...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGCCAGGACTCAAAACTTAAGTCCAATGGAGTAGTTTaGGTTGGTCCCTATTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQVRRCQEATGQDSKLKSNGVV*VGPYLG Trigger: GCCCAAATAGGGACCAACTCAAACTACTCCATTGGA...CTTAAGTTTTGAGTCCTGGCCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CCA 90 bp | GGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGCCAGGACTCAAAACTTAAGGAGTTGGTCCCTATTTaGGCCAGGGAGGATTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQVRRCQEATGQDSKLKELVPI*AREDLC Trigger: ACATAAATCCTCCCTGGCCCAAATAGGGACCAACTC...CTTAAGTTTTGAGTCCTGGCCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| 3UTR CAA 72 bp | CCCTGGGTCCTAAGCCAGATGCTCCAATGGAGTAGTTaGAGTTGGTCCCTATTTGGGCCAGGGAGGATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PWVLSQMLQWSS*SWSLFGPGRIY Trigger: ATAAATCCTCCCTGGCCCAAATAGGGACCAACTCAAACTACTCCATTGGAGCATCTGGCTTAGGACCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS GCA 90 bp | TGCAGGGCACCCTGCACCGGATGCGCTGGGTCTGGGCCCCGCAGGTaGCCTCGCGGAAACCCACGCCGCAATCCTTGCTGCTGGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CRAPCTGCAGSGPRR*PRGNPRRNPCCWGC Trigger: GCACCCCCAGCAGCAAGGATTGCGGCGTGGGTTTCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 90 bp | GCTGCATCGCCAAGGCCCGGGCCGTTCTCAGGCCTCAGCTTCTCTTaGCTGCCGCGGAGCCCCGGCGCCTGTATAACCCGCGGGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AASPRPGPFSGLSFS*LPRSPGACITRGTR Trigger: GCGGGTCCCGCGGGTTATACAGGCGCCGGGGCTCCGCGGCAGGCAAGAGAAGCTGAGGCCTGAGAACGGCCCGGGCCTTGGCGATGCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441869.5 |
||
| CDS CCA 90 bp | CCTGGGGCGGTTTCCGCGGGTGGGCAGGGAAGCGCTCTGCTGTGCTaGGGGGAGTCTGGGACCCGGTCGCCCAGAGAAAGCCACGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGAVSAGGQGSALLC*GESGTRSPRESHGC Trigger: GCACCCGTGGCTTTCTCTGGGCGACCGGGTCCCAGACTCCCCCCAGCACAGCAGAGCGCTTCCCTGCCCACCCGCGGAAACCGCCCCAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000359803.7 ENST00000405308.6 ENST00000441869.5 ENST00000490240.5 |
||
| CDS GCA 90 bp | CTGGGACCCGGTCGCCCAGAGAAAGCCACGGGTGCGGTCGCCCAGTaGCTTTCCGGGAGCACAGGCTTGAGGGACTGCGAGTGGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGPGRPEKATGAVAQ*LSGSTGLRDCEWGS Trigger: GGACCCCCACTCGCAGTCCCTCAAGCCTGTGCTCCCGGAAAGGCACTGGGCGACCGCACCCGTGGCTTTCTCTGGGCGACCGGGTCCCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000405308.6 ENST00000441869.5 |
||
| CDS GCA 90 bp | CGGCTCCAAACTCCTTCTTCCAGTTGCAGGGCACCCTGCACCGGATaGGCTGGGTCTGGGCCCCGCAGGTGCCCTCGCGGAAACCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: RLQTPSSSCRAPCTG*AGSGPRRCPRGNPR Trigger: GCGTGGGTTTCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGAGTTTGGAGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS CCA 90 bp | TCCTTCTTCCAGTTGCAGGGCACCCTGCACCGGATGCGCTGGGTCTaGGCCCCGCAGGTGCCCTCGCGGAAACCCACGCCGCAATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFFQLQGTLHRMRWV*APQVPSRKPTPQSL Trigger: CAAGGATTGCGGCGTGGGTTTCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS CCA 90 bp | CCAAACTCCTTCTTCCAGTTGCAGGGCACCCTGCACCGGATGCGCTaGGTCTGGGCCCCGCAGGTGCCCTCGCGGAAACCCACGCCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PNSFFQLQGTLHRMR*VWAPQVPSRKPTPQ Trigger: TTGCGGCGTGGGTTTCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGAGTTTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 90 bp | ACTTGCAGTCGGCTCCAAACTCCTTCTTCCAGTTGCAGGGCACCCTaGACCGGATGCGCTGGGTCTGGGCCCCGCAGGTGCCCTCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TCSRLQTPSSSCRAP*TGCAGSGPRRCPRG Trigger: TCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGAGTTTGGAGCCGACTGCAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 90 bp | AGCCGTCTGAGAAGTTCCAGATCCAGCCACATCGGCAGCTGCAAGTaGCCACCCCCTCTAACCCTGGGCCTGTGGCATTGCCTCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLRSSRSSHIGSCK*PPPLTLGLWHCLAR Trigger: CCGGGCGAGGCAATGCCACAGGCCCAGGGTTAGAGGGGGTGGGCACTTGCAGCTGCCGATGTGGCTGGATCTGGAACTTCTCAGACGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405308.6 |
||
| CDS-3UTR CAA 90 bp | CTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGCCAGGACCCACGCCGCAATCCTaGCTGCTGGGGGTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFQAGKPSEAMSGSHWPGPTPQS*LLGVQG Trigger: GCCCTGCACCCCCAGCAGCAAGGATTGCGGCGTGGG...TCCTGGCCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS GCA 90 bp | GACAGGAGCCGTCTGAGAAGTTCCAGATCCAGCCACATCGGCAGCTaGAAGTGCCCACCCCCTCTAACCCTGGGCCTGTGGCATTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DRSRLRSSRSSHIGS*KCPPPLTLGLWHCL Trigger: GAGGCAATGCCACAGGCCCAGGGTTAGAGGGGGTGGGCACTTGCAGCTGCCGATGTGGCTGGATCTGGAACTTCTCAGACGGCTCCTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405308.6 |
||
| CDS-3UTR CAA 90 bp | AATGCTGCCCGTGGCTGGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCTTGGGGGTGCAGGGCTaGGTGACGCGGATGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NAARGWRADKGKPFQDTLLGVQG*VTRMVS Trigger: GGAGACCATCCGCGTCACCAAGCCCTGCACCCCCAA...GAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCCAGCCACGGGCAGCATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTGACACCAGGGGCTCCTaGGCATCCAGGCTTGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFDTRGS*ASRLGV Trigger: GACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTC...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS TCA 90 bp | GCTGACCTTTGGCCTTTGCTTTGGTCTTGGGGGTGCAGGGCTTGGTaGCGCGGATGGTCTCCTGGCACTGAGCATTGTAGCGCGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ADLWPLLWSWGCRAW*RGWSPGTEHCSAPS Trigger: AGAAGGCGCGCTACAATGCTCAGTGCCAGGAGACCATCCGCGTCACCAAGCCCTGCACCCCCAAGACCAAAGCAAAGGCCAAAGGTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 |
||
| CDS-3UTR CAA 90 bp | GGAGAGCTGACAAAGGCAAGCCGTTCCAGGACACTCTCCCTGGGTCCTAAGCCACCTTTGGCCTTTGCTTaGGTCTTGGGGGTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GELTKASRSRTLSLGPKPPLAFA*VLGVQG Trigger: GCCCTGCACCCCCAAGACCAAAGCAAAGGCCAAAGG...TGGCTTAGGACCCAGGGAGAGTGTCCTGGAACGGCTTGCCTTTGTCAGCTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCGCTGACCTTTGGCCTTaGCTTTGGTCTTGGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VTPGAPWHPGLASSPFPSADLWP*LWSWGC Trigger: GCACCCCCAAGACCAAAGCAAAGGCCAAAGGTCAGC...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS TCA 90 bp | TCTTGGCTTTGGCCTTTGCTTTGGTCTTGGGGGTGCAGGGCTTGGTaGCGCGGATGGTCTCCTGGCACTGAGCATTGTAGCGCGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SWLWPLLWSWGCRAW*RGWSPGTEHCSAPS Trigger: AGAAGGCGCGCTACAATGCTCAGTGCCAGGAGACCATCCGCGTCACCAAGCCCTGCACCCCCAAGACCAAAGCAAAGGCCAAAGCCAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000395569.8 ENST00000405308.6 ENST00000407067.1 ENST00000533283.5 ENST00000617138.4 |
||
| CDS-3UTR CAA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTGCTCTGGGACTCACATaGCTTTGGGGGAGGCTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFALGLT*LWGRLK Trigger: CTTGAGCCTCCCCCAAAGCAATGTGAGTCCCAGAGC...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | TTCCCTTTCTTGGCTGAGAAGCGGGCAGATTCACCCCTGCCCTGCTGGCCTCGCTTTCCCTTCCCTTTCTaGGCTGAGAAGCGGGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FPFLAEKRADSPLPCWPRFPFPF*AEKRAD Trigger: ATCTGCCCGCTTCTCAGCCAAGAAAGGGAAGGGAAA...GCGAGGCCAGCAGGGCAGGGGTGAATCTGCCCGCTTCTCAGCCAAGAAAGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS GCA 90 bp | TGTAGCGCGCCTTCTTCAGGGTGCCTTGGCGGACTTTGGTGCCTGTaGCCCCATCACACGCACCCCAGTTCTCAAACTTGTACTTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CSAPSSGCLGGLWCL*PHHTHPSSQTCTCS Trigger: ACTGCAAGTACAAGTTTGAGAACTGGGGTGCGTGTGATGGGGGCACAGGCACCAAAGTCCGCCAAGGCACCCTGAAGAAGGCGCGCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000395569.8 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS CCA 90 bp | ACTGAGCATTGTAGCGCGCCTTCTTCAGGGTGCCTTGGCGGACTTTaGTGCCTGTGCCCCCATCACACGCACCCCAGTTCTCAAACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TEHCSAPSSGCLGGL*CLCPHHTHPSSQTC Trigger: ACAAGTTTGAGAACTGGGGTGCGTGTGATGGGGGCACAGGCACCAAAGTCCGCCAAGGCACCCTGAAGAAGGCGCGCTACAATGCTCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000395569.8 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS-3UTR CAA 90 bp | TTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGGCCTTTGCTTTGGTCTaGGGGGTGCAGGGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FRLFQAGKPSEAMSGSHWAFALV*GVQGLV Trigger: CACCAAGCCCTGCACCCCCAAGACCAAAGCAAAGGC...CCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | CACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCCTTTACCTTATCTTTCTTTTaGGCGACCGCGGAGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HQGLLGIQAWRLVLSLPFTLSFF*ATAEVS Trigger: GCTCACCTCCGCGGTCGCCAAAAAGAAAGATAAGGT...AAAGGGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | GTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAAACTCCTTCTTCCAGTaGCAGGGCACCCTGCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: VVPIFRLFQAGKPSEAMSNSFFQ*QGTLHR Trigger: CCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGAGTT...TGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | GTCCCCAGCATCACCTGCGGCCTCTCTTGTAGTGCCCATCTTCAGACTTTTCCAGGGACTCACATTGCTTaGGGGGAGGCTCAAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPSITCGLSCSAHLQTFPGTHIA*GEAQAS Trigger: GGAAGCTTGAGCCTCCCCCAAAGCAATGTGAGTCCC...TGGAAAAGTCTGAAGATGGGCACTACAAGAGAGGCCGCAGGTGATGCTGGGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | TCTCTTGTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGCCTTGGCATCCAGGCTaGGCGTCTAGTCCTTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLVVPIFRLFQAGKPSEAPWHPG*ASSPFP Trigger: AGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGG...CGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTACAAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | GCGGCCTCTCTTGTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTAGGTTTAACTTGGAATaGTCCCCTCACAGGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AASLVVPIFRLFQAGKPSRFNLE*SPHRRG Trigger: CCCCCGCCTGTGAGGGGACAATTCCAAGTTAAACCT...ACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTACAAGAGAGGCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | TTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCAGGAAGCCACTGGCCCCAGTTCTCAAACTaGTACTTGCAGTCGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRLFQAGKPSEAMSGSHWPQFSN*YLQSAP Trigger: TGGAGCCGACTGCAAGTACAAGTTTGAGAACTGGGG...CCAGTGGCTTCCTGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | GTGACACCAGGGGCTCCTTGGCATCCAGGCTTGGCGTCTAGTCCTTTCCCTTCCAACTTAAGGTTTAACTaGGAATTGTCCCCTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VTPGAPWHPGLASSPFPSNLRFN*ELSPHR Trigger: CCTGTGAGGGGACAATTCCAAGTTAAACCTTAAGTT...GGAAGGGAAAGGACTAGACGCCAAGCCTGGATGCCAAGGAGCCCCTGGTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS-3UTR CAA 90 bp | GTAGTGCCCATCTTCAGACTTTTCCAGGCAGGGAAGCCAAGTGAGGCGATGTCATTCTCAAACTTGTACTaGCAGTCGGCTCCAAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVPIFRLFQAGKPSEAMSFSNLY*QSAPNS Trigger: GGAGTTTGGAGCCGACTGCAAGTACAAGTTTGAGAA...TGACATCGCCTCACTTGGCTTCCCTGCCTGGAAAAGTCTGAAGATGGGCACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489525.5 |
||
| CDS CCA 72 bp | CAGTTGCAGGGCACCCTGCACCGGATGCGCTGGGTCTaGGCCCCGCAGGTGCCCTCGCGGAAACCCACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QLQGTLHRMRWV*APQVPSRKPTP Trigger: CGGCGTGGGTTTCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS CAA 72 bp | CAAGTCGGGCTGCTAAGGTGGCGGCGGTGGGAAGACTaGGGGCGGCCCCTCGCCGCTAGCCCGGACGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: QVGLLRWRRWED*GRPLAASPDAP Trigger: CGGTGCGTCCGGGCTAGCGGCGAGGGGCCGCCCCAAGTCTTCCCACCGCCGCCACCTTAGCAGCCCGACTTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000407067.1 ENST00000481047.1 |
||
| CDS GCA 72 bp | CGCGGAAACCCACGCCGCAATCCTTGCTGCTGGGGGTaGAGGGCCCCCAGGCCCACTCAGCGCACTCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGNPRRNPCCWG*RAPRPTQRTRS Trigger: GGAGCGAGTGCGCTGAGTGGGCCTGGGGGCCCTGCACCCCCAGCAGCAAGGATTGCGGCGTGGGTTTCCGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 72 bp | CCCTGCACCGGATGCGCTGGGTCTGGGCCCCGCAGGTaGCCTCGCGGAAACCCACGCCGCAATCCTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PCTGCAGSGPRR*PRGNPRRNPCC Trigger: GCAGCAAGGATTGCGGCGTGGGTTTCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 72 bp | AAGTGCCCACCCCCTCTAACCCTGGGCCTGTGGCATTaGCTCGCCCGGTTCCCCCAAACCGGGAGAGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KCPPPLTLGLWH*LARFPQTGRAP Trigger: GGGGGCTCTCCCGGTTTGGGGGAACCGGGCGAGGCAATGCCACAGGCCCAGGGTTAGAGGGGGTGGGCACTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000405308.6 |
||
| CDS CCA 72 bp | GTTTCCGCGGGTGGGCAGGGAAGCGCTCTGCTGTGCTaGGGGGAGTCTGGGACCCGGTCGCCCAGAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VSAGGQGSALLC*GESGTRSPRES Trigger: GCTTTCTCTGGGCGACCGGGTCCCAGACTCCCCCCAGCACAGCAGAGCGCTTCCCTGCCCACCCGCGGAAAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000359803.7 ENST00000405308.6 ENST00000441869.5 ENST00000490240.5 |
||
| CDS CCA 72 bp | TTCTTCCAGTTGCAGGGCACCCTGCACCGGATGCGCTaGGTCTGGGCCCCGCAGGTGCCCTCGCGGAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: FFQLQGTLHRMR*VWAPQVPSRKP Trigger: GGGTTTCCGCGAGGGCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTGGAAGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS CAA 72 bp | CAAGTGCCCACCCCCTCTAACCCTGGGCCTGTGGCATaGCCTCGCCCGGTTCCCCCAAACCGGGAGAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QVPTPSNPGPVA*PRPVPPNRESP Trigger: GGGGCTCTCCCGGTTTGGGGGAACCGGGCGAGGCAATGCCACAGGCCCAGGGTTAGAGGGGGTGGGCACTTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000405308.6 |
||
| CDS GCA 72 bp | CGGCTCCAAACTCCTTCTTCCAGTTGCAGGGCACCCTaGACCGGATGCGCTGGGTCTGGGCCCCGCAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: RLQTPSSSCRAP*TGCAGSGPRRC Trigger: GCACCTGCGGGGCCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGAGTTTGGAGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 72 bp | GGTCGCCCAGAGAAAGCCACGGGTGCGGTCGCCCAGTaGCTTTCCGGGAGCACAGGCTTGAGGGACTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRPEKATGAVAQ*LSGSTGLRDCE Trigger: CTCGCAGTCCCTCAAGCCTGTGCTCCCGGAAAGGCACTGGGCGACCGCACCCGTGGCTTTCTCTGGGCGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000405308.6 ENST00000441869.5 |
||
| CDS GCA 72 bp | GAGTCTGGGACCCGGTCGCCCAGAGAAAGCCACGGGTaGGGTCGCCCAGTGCCTTTCCGGGAGCACAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESGTRSPRESHG*GRPVPFREHRL Trigger: AAGCCTGTGCTCCCGGAAAGGCACTGGGCGACCGCACCCGTGGCTTTCTCTGGGCGACCGGGTCCCAGACTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000405308.6 ENST00000441869.5 ENST00000490240.5 |
||
| CDS CCA 72 bp | AGCTGCAAGTGCCCACCCCCTCTAACCCTGGGCCTGTaGCATTGCCTCGCCCGGTTCCCCCAAACCGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SCKCPPPLTLGL*HCLARFPQTGR Trigger: TCTCCCGGTTTGGGGGAACCGGGCGAGGCAATGCCACAGGCCCAGGGTTAGAGGGGGTGGGCACTTGCAGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000405308.6 |
||
| CDS GCA 72 bp | CGTCTGAGAAGTTCCAGATCCAGCCACATCGGCAGCTaGAAGTGCCCACCCCCTCTAACCCTGGGCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLRSSRSSHIGS*KCPPPLTLGLW Trigger: CCACAGGCCCAGGGTTAGAGGGGGTGGGCACTTGCAGCTGCCGATGTGGCTGGATCTGGAACTTCTCAGACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405308.6 |
||
| CDS CCA 72 bp | TGTAGCGCGCCTTCTTCAGGGTGCCTTGGCGGACTTTaGTGCCTGTGCCCCCATCACACGCACCCCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSAPSSGCLGGL*CLCPHHTHPSS Trigger: AGAACTGGGGTGCGTGTGATGGGGGCACAGGCACCAAAGTCCGCCAAGGCACCCTGAAGAAGGCGCGCTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 11 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000395569.8 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 72 bp | TGTACTTGCAGTCGGCTCCAAACTCCTTCTTCCAGTTaGAGGGCACCCTGCACCGGATGCGCTGGGTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: CTCSRLQTPSSS*RAPCTGCAGSG Trigger: CCCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGAGTTTGGAGCCGACTGCAAGTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 72 bp | AGAAGTTCCAGATCCAGCCACATCGGCAGCTGCAAGTaGCCACCCCCTCTAACCCTGGGCCTGTGGCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSRSSHIGSCK*PPPLTLGLWHC Trigger: GCAATGCCACAGGCCCAGGGTTAGAGGGGGTGGGCACTTGCAGCTGCCGATGTGGCTGGATCTGGAACTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000405308.6 |
||
| CDS TCA 72 bp | TGGCCTTTGCTTTGGTCTTGGGGGTGCAGGGCTTGGTaGCGCGGATGGTCTCCTGGCACTGAGCATTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: WPLLWSWGCRAW*RGWSPGTEHCS Trigger: GCTACAATGCTCAGTGCCAGGAGACCATCCGCGTCACCAAGCCCTGCACCCCCAAGACCAAAGCAAAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000395569.8 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000617138.4 |
||
| CDS TCA 72 bp | GGAGCCCGCAGGCCTGGATTTGGTGAAACTTGGCGCTaGCAGGAGCCGTCTGAGAAGTTCCAGATCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GARRPGFGETWR*QEPSEKFQIQP Trigger: TGGCTGGATCTGGAACTTCTCAGACGGCTCCTGTCAGCGCCAAGTTTCACCAAATCCAGGCCTGCGGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000405308.6 ENST00000441869.5 |
||
| CDS CAA 72 bp | TTGTACTTGCAGTCGGCTCCAAACTCCTTCTTCCAGTaGCAGGGCACCCTGCACCGGATGCGCTGGGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LYLQSAPNSFFQ*QGTLHRMRWVW Trigger: CCAGACCCAGCGCATCCGGTGCAGGGTGCCCTGCAACTGGAAGAAGGAGTTTGGAGCCGACTGCAAGTACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS GCA 72 bp | CCTTCTTCAGGGTGCCTTGGCGGACTTTGGTGCCTGTaGCCCCATCACACGCACCCCAGTTCTCAAACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PSSGCLGGLWCL*PHHTHPSSQTC Trigger: ACAAGTTTGAGAACTGGGGTGCGTGTGATGGGGGCACAGGCACCAAAGTCCGCCAAGGCACCCTGAAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 11 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000395569.8 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||
| CDS CAA 72 bp | CCTGTGCCCCCATCACACGCACCCCAGTTCTCAAACTaGTACTTGCAGTCGGCTCCAAACTCCTTCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PVPPSHAPQFSN*YLQSAPNSFFQ Trigger: CTGGAAGAAGGAGTTTGGAGCCGACTGCAAGTACAAGTTTGAGAACTGGGGTGCGTGTGATGGGGGCACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000359803.7 ENST00000395565.5 ENST00000395566.9 ENST00000405308.6 ENST00000407067.1 ENST00000481047.1 ENST00000489525.5 ENST00000490240.5 ENST00000533283.5 ENST00000533952.5 |
||