Pregenerated sensors for MDH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000014641Ensembl transcript IDs: ENST00000421012.2, ENST00000432309.6, ENST00000442225.5, ENST00000454035.5, ENST00000462944.1, ENST00000485155.1, ENST00000485781.5, ENST00000544381.4
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCTCCGCTCCCGACGCGGCGCTCTCTGGGAACTGTAGTTTACGCTaGCCTGGTTGTGGCGCAATCTCCAAAGCATTTCCTTCAAGTGTT | + |
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Preference number: 5 (lower is better) Translates to: GSAPDAALSGNCSLR*PGCGAISKAFPSSV Trigger: AACACTTGAAGGAAATGCTTTGGAGATTGCGCCACAACCAGGGCAGCGTAAACTACAGTTCCCAGAGAGCGCCGCGTCGGGAGCGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485781.5 ENST00000544381.4 |
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| CDS TCA 90 bp | GCGCTCTGCGCCGATTGCAAAGTAGTCCCTGAGGATGAGCCCCTGTaGTTGGAGGACGACAACAAACGGATGGTTTGGGCTCAGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: ALCADCKVVPEDEPL*LEDDNKRMVWAQEE Trigger: TTCCTCCTGAGCCCAAACCATCCGTTTGTTGTCGTCCTCCAATCACAGGGGCTCATCCTCAGGGACTACTTTGCAATCGGCGCAGAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000485781.5 ENST00000544381.4 |
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| CDS GCA 90 bp | ATACCCCGCAAGGTGGAAATCAATCCCTTCCCATTACTGGGTCACTaGGGCAATCCCCAGAAGATGAGTCCGAGCTTGCCAAAGGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: IPRKVEINPFPLLGH*GNPQKMSPSLPKGA Trigger: CGCGCCCTTTGGCAAGCTCGGACTCATCTTCTGGGGATTGCCGCAGTGACCCAGTAATGGGAAGGGATTGATTTCCACCTTGCGGGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421012.2 ENST00000432309.6 |
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| CDS CCA 90 bp | CTACTTCTCCAGAGTCCTCCTAAGAGCGCCCCATACCCCGCAAGGTaGAAATCAATCCCTTCCCATTACTGGGTCACTGCGGCAATCCCC | + |
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Preference number: 5 (lower is better) Translates to: LLLQSPPKSAPYPAR*KSIPSHYWVTAAIP Trigger: GGGGATTGCCGCAGTGACCCAGTAATGGGAAGGGATTGATTTCCACCTTGCGGGGTATGGGGCGCTCTTAGGAGGACTCTGGAGAAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421012.2 ENST00000432309.6 |
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| CDS TCA 90 bp | ACGACAACAAACGGATGGTTTGGGCTCAGGAGGAAAGGACCTGCCTaGTGGAGCCCGGCAATTGGCGGGAGAGATAGCGTGTGTAACTCT | + |
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Preference number: 5 (lower is better) Translates to: TTTNGWFGLRRKGPA*WSPAIGGRDSVCNS Trigger: AGAGTTACACACGCTATCTCTCCCGCCAATTGCCGGGCTCCATCAGGCAGGTCCTTTCCTCCTGAGCCCAAACCATCCGTTTGTTGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485781.5 ENST00000544381.4 |
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| CDS TCA 90 bp | TCTAACTCTGTCCATTCACACACCCTCCTGAGGGGGCAGGGAAATTaGGTCATGTGTGAGTTTGCTGTCAGTTCCAGCAAACTGCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: SNSVHSHTLLRGQGN*VMCEFAVSSSKLPD Trigger: GTCTGGCAGTTTGCTGGAACTGACAGCAAACTCACACATGACTCAATTTCCCTGCCCCCTCAGGAGGGTGTGTGAATGGACAGAGTTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462944.1 |
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| CDS GCA 90 bp | GTCCTTTGGAAAATAGCTGCAGCGTCGCATTTTGTCCTCCCGTCATaGAGCAGGATTAAGATCGCTCCTCTCCCAGGACAACTACTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VLWKIAAASHFVLPS*SRIKIAPLPGQLLL Trigger: GAGAAGTAGTTGTCCTGGGAGAGGAGCGATCTTAATCCTGCTGCATGACGGGAGGACAAAATGCGACGCTGCAGCTATTTTCCAAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421012.2 ENST00000432309.6 |
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| CDS TCA 90 bp | CCATTCACACACCCTCCTGAGGGGGCAGGGAAATTGAGTCATGTGTaGGTTTGCTGTCAGTTCCAGCAAACTGCCAGACAAATTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: PFTHPPEGAGKLSHV*VCCQFQQTARQILP Trigger: AGGAAGAATTTGTCTGGCAGTTTGCTGGAACTGACAGCAAACTCACACATGACTCAATTTCCCTGCCCCCTCAGGAGGGTGTGTGAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462944.1 |
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| CDS CCA 90 bp | GATTGGTTCAGACTTATCGTCCTTATCAAACACCGTAACGTCCTTTaGAAAATAGCTGCAGCGTCGCATTTTGTCCTCCCGTCATGCAGC | + |
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Preference number: 5 (lower is better) Translates to: DWFRLIVLIKHRNVL*KIAAASHFVLPSCS Trigger: GCTGCATGACGGGAGGACAAAATGCGACGCTGCAGCTATTTTCCAAAGGACGTTACGGTGTTTGATAAGGACGATAAGTCTGAACCAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421012.2 ENST00000432309.6 |
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| CDS CCA 90 bp | TTCCTTCTTCCAGATGAGAGTCACGTCTCTGAGACGAAACAAGGATaGATAGCCTCGAAGGCTTCTTTCAAGCTTCTGACACTAAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: FLLPDESHVSETKQG*IASKASFKLLTLSS Trigger: AGAGCTTAGTGTCAGAAGCTTGAAAGAAGCCTTCGAGGCTATCCATCCTTGTTTCGTCTCAGAGACGTGACTCTCATCTGGAAGAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442225.5 ENST00000454035.5 |
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| CDS TCA 90 bp | CGGGGAAGCAGATTTCCTTACTCTTTTGGTTCCAAAGGCCATTTATaGACAAGGGAGTGCTTACTGAGTAACTCTCTCCCACATGACTGT | + |
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Preference number: 5 (lower is better) Translates to: RGSRFPYSFGSKGHL*TRECLLSNSLPHDC Trigger: ACAGTCATGTGGGAGAGAGTTACTCAGTAAGCACTCCCTTGTTCATAAATGGCCTTTGGAACCAAAAGAGTAAGGAAATCTGCTTCCCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485155.1 |
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| CDS TCA 90 bp | CTGTCACTCCCTACAGACAACAAGCAAAGAATCCTCCGCTTTGAATaGGCTTACAGAAGAAGGCTCTTTTCTAACTCTGTCCATTCACAC | + |
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Preference number: 5 (lower is better) Translates to: LSLPTDNKQRILRFE*AYRRRLFSNSVHSH Trigger: GTGTGAATGGACAGAGTTAGAAAAGAGCCTTCTTCTGTAAGCTCATTCAAAGCGGAGGATTCTTTGCTTGTTGTCTGTAGGGAGTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462944.1 |
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| CDS TCA 90 bp | ATGGATAGCCTCGAAGGCTTCTTTCAAGCTTCTGACACTAAGCTCTaGAAGTTAGCAGCACTCAGCAATTTGGTACTCACTCATAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: MDSLEGFFQASDTKL*KLAALSNLVLTHRS Trigger: ACTTCTATGAGTGAGTACCAAATTGCTGAGTGCTGCTAACTTTCAGAGCTTAGTGTCAGAAGCTTGAAAGAAGCCTTCGAGGCTATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442225.5 |
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| CDS TCA 72 bp | AACGGATGGTTTGGGCTCAGGAGGAAAGGACCTGCCTaGTGGAGCCCGGCAATTGGCGGGAGAGATAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: NGWFGLRRKGPA*WSPAIGGRDSV Trigger: CACGCTATCTCTCCCGCCAATTGCCGGGCTCCATCAGGCAGGTCCTTTCCTCCTGAGCCCAAACCATCCGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485781.5 ENST00000544381.4 |
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| CDS CAA 90 bp | GGTTTGGGCTCAGGAGGAAAGGACCTGCCTGATGGAGCCCGGCAATaGGCGGGAGAGATAGCGTGTGTAACTCTAGGGAGGGGAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: GLGSGGKDLPDGARQ*AGEIACVTLGRGES Trigger: TGATTCTCCCCTCCCTAGAGTTACACACGCTATCTCTCCCGCCAATTGCCGGGCTCCATCAGGCAGGTCCTTTCCTCCTGAGCCCAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000485781.5 ENST00000544381.4 |
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| CDS GCA 72 bp | CCCGACGCGGCGCTCTCTGGGAACTGTAGTTTACGCTaGCCTGGTTGTGGCGCAATCTCCAAAGCATTTCCT | + |
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Preference number: 6 (lower is better) Translates to: PDAALSGNCSLR*PGCGAISKAFP Trigger: AGGAAATGCTTTGGAGATTGCGCCACAACCAGGGCAGCGTAAACTACAGTTCCCAGAGAGCGCCGCGTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485781.5 ENST00000544381.4 |
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| CDS CAA 72 bp | TCAGGAGGAAAGGACCTGCCTGATGGAGCCCGGCAATaGGCGGGAGAGATAGCGTGTGTAACTCTAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGGKDLPDGARQ*AGEIACVTLGR Trigger: CCTCCCTAGAGTTACACACGCTATCTCTCCCGCCAATTGCCGGGCTCCATCAGGCAGGTCCTTTCCTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485781.5 ENST00000544381.4 |
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| CDS CAA 72 bp | GCCCCTGTGATTGGAGGACGACAACAAACGGATGGTTaGGGCTCAGGAGGAAAGGACCTGCCTGATGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: APVIGGRQQTDG*GSGGKDLPDGA Trigger: GGCTCCATCAGGCAGGTCCTTTCCTCCTGAGCCCAAACCATCCGTTTGTTGTCGTCCTCCAATCACAGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000485781.5 ENST00000544381.4 |
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| CDS CCA 72 bp | CAGAGTCCTCCTAAGAGCGCCCCATACCCCGCAAGGTaGAAATCAATCCCTTCCCATTACTGGGTCACTGCG | + |
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Preference number: 6 (lower is better) Translates to: QSPPKSAPYPAR*KSIPSHYWVTA Trigger: CGCAGTGACCCAGTAATGGGAAGGGATTGATTTCCACCTTGCGGGGTATGGGGCGCTCTTAGGAGGACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421012.2 ENST00000432309.6 |
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| CDS TCA 72 bp | CACCCTCCTGAGGGGGCAGGGAAATTGAGTCATGTGTaGGTTTGCTGTCAGTTCCAGCAAACTGCCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: HPPEGAGKLSHV*VCCQFQQTARQ Trigger: TTGTCTGGCAGTTTGCTGGAACTGACAGCAAACTCACACATGACTCAATTTCCCTGCCCCCTCAGGAGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462944.1 |
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| CDS GCA 72 bp | AAGGTGGAAATCAATCCCTTCCCATTACTGGGTCACTaGGGCAATCCCCAGAAGATGAGTCCGAGCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: KVEINPFPLLGH*GNPQKMSPSLP Trigger: TGGCAAGCTCGGACTCATCTTCTGGGGATTGCCGCAGTGACCCAGTAATGGGAAGGGATTGATTTCCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421012.2 ENST00000432309.6 |
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| CDS TCA 72 bp | GTCCATTCACACACCCTCCTGAGGGGGCAGGGAAATTaGGTCATGTGTGAGTTTGCTGTCAGTTCCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: VHSHTLLRGQGN*VMCEFAVSSSK Trigger: TTTGCTGGAACTGACAGCAAACTCACACATGACTCAATTTCCCTGCCCCCTCAGGAGGGTGTGTGAATGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000462944.1 |
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| CDS GCA 72 bp | AAAATAGCTGCAGCGTCGCATTTTGTCCTCCCGTCATaGAGCAGGATTAAGATCGCTCCTCTCCCAGGACAA | + |
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Preference number: 6 (lower is better) Translates to: KIAAASHFVLPS*SRIKIAPLPGQ Trigger: TTGTCCTGGGAGAGGAGCGATCTTAATCCTGCTGCATGACGGGAGGACAAAATGCGACGCTGCAGCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421012.2 ENST00000432309.6 |
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| CDS CCA 72 bp | AGACTTATCGTCCTTATCAAACACCGTAACGTCCTTTaGAAAATAGCTGCAGCGTCGCATTTTGTCCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: RLIVLIKHRNVL*KIAAASHFVLP Trigger: CGGGAGGACAAAATGCGACGCTGCAGCTATTTTCCAAAGGACGTTACGGTGTTTGATAAGGACGATAAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421012.2 ENST00000432309.6 |
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| CDS CCA 72 bp | CCTGCTTCAGCGGGGAAGCAGATTTCCTTACTCTTTTaGTTCCAAAGGCCATTTATGAACAAGGGAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PASAGKQISLLF*FQRPFMNKGVL Trigger: AAGCACTCCCTTGTTCATAAATGGCCTTTGGAACCAAAAGAGTAAGGAAATCTGCTTCCCCGCTGAAGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485155.1 |
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| CDS TCA 72 bp | CTCGAAGGCTTCTTTCAAGCTTCTGACACTAAGCTCTaGAAGTTAGCAGCACTCAGCAATTTGGTACTCACT | + |
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Preference number: 6 (lower is better) Translates to: LEGFFQASDTKL*KLAALSNLVLT Trigger: AGTGAGTACCAAATTGCTGAGTGCTGCTAACTTTCAGAGCTTAGTGTCAGAAGCTTGAAAGAAGCCTTCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000442225.5 |
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| CDS TCA 72 bp | CTCGAAGGCTTCTTTCAAGCTTCTGACACTAAGCTCTaGAAGTTAGCAGCACTCAGCAATTTGGTACTCACA | + |
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Preference number: 6 (lower is better) Translates to: LEGFFQASDTKL*KLAALSNLVLT Trigger: TGTGAGTACCAAATTGCTGAGTGCTGCTAACTTTCAGAGCTTAGTGTCAGAAGCTTGAAAGAAGCCTTCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454035.5 |
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| CDS TCA 72 bp | CCTACAGACAACAAGCAAAGAATCCTCCGCTTTGAATaGGCTTACAGAAGAAGGCTCTTTTCTAACTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PTDNKQRILRFE*AYRRRLFSNSV Trigger: GACAGAGTTAGAAAAGAGCCTTCTTCTGTAAGCTCATTCAAAGCGGAGGATTCTTTGCTTGTTGTCTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462944.1 |
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| CDS TCA 72 bp | TGTAAGTTACTGTCATTAGTGATATCTCCCATTGACTaGCACCTGCTGGTTGCACCAAGTCAACTGAGTACA | + |
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Preference number: 6 (lower is better) Translates to: CKLLSLVISPID*HLLVAPSQLST Trigger: TGTACTCAGTTGACTTGGTGCAACCAGCAGGTGTCAGTCAATGGGAGATATCACTAATGACAGTAACTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485155.1 |
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| CDS TCA 72 bp | GTTCCAAAGGCCATTTATGAACAAGGGAGTGCTTACTaGGTAACTCTCTCCCACATGACTGTAAGTTACTGT | + |
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Preference number: 6 (lower is better) Translates to: VPKAIYEQGSAY*VTLSHMTVSYC Trigger: ACAGTAACTTACAGTCATGTGGGAGAGAGTTACTCAGTAAGCACTCCCTTGTTCATAAATGGCCTTTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000485155.1 |
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| CDS CCA 72 bp | CCTGCTGGTTGCACCAAGTCAACTGAGTACAATATATaGAAGAGTTCTCATTTGCAAAGTGTTTTCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PAGCTKSTEYNI*KSSHLQSVFSA Trigger: GGCACTGAAAACACTTTGCAAATGAGAACTCTTCCATATATTGTACTCAGTTGACTTGGTGCAACCAGCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485155.1 |
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| CDS TCA 72 bp | TTGGTTCAGACTGCATGGAGAAATGGTCCACTGATGTaGCTAAGCCCAGAAGTGTTTGGTTTCTTTTTACTT | + |
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Preference number: 6 (lower is better) Translates to: LVQTAWRNGPLM*LSPEVFGFFLL Trigger: AAGTAAAAAGAAACCAAACACTTCTGGGCTTAGTCACATCAGTGGACCATTTCTCCATGCAGTCTGAACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000442225.5 ENST00000454035.5 |
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