RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MDGA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000139915

Ensembl transcript IDs: ENST00000357362.7, ENST00000399232.8, ENST00000426342.7, ENST00000472499.2, ENST00000482848.7, ENST00000486952.2, ENST00000554762.5, ENST00000555521.1, ENST00000557238.5, ENST00000557516.1

Found 586 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACTCATAGTGACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATaGTGGTTCCACTGCAGGGGGATACTGAACGATGAGCTGCACCAA +
Preference number: 1 (lower is better)
Translates to: THSDTSILSLPDFQE*WFHCRGILNDELHQ
Trigger: TTGGTGCAGCTCATCGTTCAGTATCCCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGTCACTATGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR CCA 90 bp CACTGCAGGGGGATACTGAACGATGAGCTGCACCAAGGCTTCCCTTaGTTTCACGTTAAATCCATTGTATTGGCTGGTCTGACATCTGTA +
Preference number: 1 (lower is better)
Translates to: HCRGILNDELHQGFP*FHVKSIVLAGLTSV
Trigger: TACAGATGTCAGACCAGCCAATACAATGGATTTAACGTGAAACCAAGGGAAGCCTTGGTGCAGCTCATCGTTCAGTATCCCCCTGCAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 90 bp GAAAGGCCATGGCTGTCTAGGAGGTTAAACAACAAATATCTTGTCTaGATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCAGAAGC +
Preference number: 1 (lower is better)
Translates to: ERPWLSRRLNNKYLV*MGLRSSFGPFFFRS
Trigger: GCTTCTGAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGTTTAACCTCCTAGACAGCCATGGCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR GCA 90 bp CTGTGTATTCCTGAGAGTCAAATTGACCCGTCCGTAATAATTTATTaGCCAAGCGCCACTCATAGGTCAGCACCCGTATTGGATAGGCTC +
Preference number: 1 (lower is better)
Translates to: LCIPESQIDPSVIIY*PSATHRSAPVLDRL
Trigger: GAGCCTATCCAATACGGGTGCTGACCTATGAGTGGCGCTTGGGCAATAAATTATTACGGACGGGTCAATTTGACTCTCAGGAATACACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR TCA 90 bp AACAGGGCTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTaGTGTCTCAATGTACATATAAAAACCTTCTTTGGAGCCACTACG +
Preference number: 1 (lower is better)
Translates to: NRAEKSSLFAFQSGS*CLNVHIKTFFGATT
Trigger: CGTAGTGGCTCCAAAGAAGGTTTTTATATGTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAGCCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 90 bp AGCCAGATTTTTCAGGCCCAGTTCCACTGTAGAGTTAGTATGCACTaGAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAAT +
Preference number: 1 (lower is better)
Translates to: SQIFQAQFHCRVSMH*NPKHFLVPSKARAN
Trigger: ATTGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAACTCTACAGTGGAACTGGGCCTGAAAAATCTGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR TCA 90 bp ATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTaGCTTCAAGTTTATAGTAGTTTAACTTCTCAAAAGCTTTCTGGC +
Preference number: 1 (lower is better)
Translates to: ITVMKCYSQVPAQVS*LQVYSSLTSQKLSG
Trigger: GCCAGAAAGCTTTTGAGAAGTTAAACTACTATAAACTTGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 90 bp AATAAAGCCAGATTTTTCAGGCCCAGTTCCACTGTAGAGTTAGTATaGACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGG +
Preference number: 1 (lower is better)
Translates to: NKARFFRPSSTVELV*TAIPNIFLFPLKLG
Trigger: CCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAACTCTACAGTGGAACTGGGCCTGAAAAATCTGGCTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR TCA 90 bp AAGGCTTCCCTTGGTTTCACGTTAAATCCATTGTATTGGCTGGTCTaGCATCTGTACATTCCTGACATTTCCCTAGATACATTCACAATC +
Preference number: 1 (lower is better)
Translates to: KASLGFTLNPLYWLV*HLYIPDISLDTFTI
Trigger: GATTGTGAATGTATCTAGGGAAATGTCAGGAATGTACAGATGTCAGACCAGCCAATACAATGGATTTAACGTGAAACCAAGGGAAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR TCA 90 bp CACGTTAAATCCATTGTATTGGCTGGTCTGACATCTGTACATTCCTaGCATTTCCCTAGATACATTCACAATCCTCAGTGTTCCATCATA +
Preference number: 1 (lower is better)
Translates to: HVKSIVLAGLTSVHS*HFPRYIHNPQCSII
Trigger: TATGATGGAACACTGAGGATTGTGAATGTATCTAGGGAAATGTCAGGAATGTACAGATGTCAGACCAGCCAATACAATGGATTTAACGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR TCA 90 bp CATAGCAAGAGCCTATATGTTGTCCATACATGTGATAAAAGAAGCTaGAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAG +
Preference number: 1 (lower is better)
Translates to: HSKSLYVVHTCDKRS*NNMQCLWVHKGFWE
Trigger: CTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTCAGCTTCTTTTATCACATGTATGGACAACATATAGGCTCTTGCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR TCA 90 bp AAATCCACAATGAAATTCTCCACTATATTTGATCACACGAATTGTTaGATCTCCTTCACCAAATTTGGTGAGAGGAGTCAGTCGGACTTC +
Preference number: 1 (lower is better)
Translates to: KSTMKFSTIFDHTNC*ISFTKFGERSQSDF
Trigger: GAAGTCCGACTGACTCCTCTCACCAAATTTGGTGAAGGAGATTCAACAATTCGTGTGATCAAATATAGTGGAGAATTTCATTGTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR CAA 90 bp GGCTCTCAGTACTCTGCAACTCATAGTGACACTTCGATCCTGTCCTaGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGGATACTG +
Preference number: 2 (lower is better)
Translates to: GSQYSATHSDTSILS*PDFQECWFHCRGIL
Trigger: CAGTATCCCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGTCACTATGAGTTGCAGAGTACTGAGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR TCA 90 bp GAAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAGCTATGCTGAAGGGGATACTGAACGATaGGCTGCACCAAGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: ETICSVCGSIRVFGSYAEGDTER*AAPRLP
Trigger: GGGAAGCCTTGGTGCAGCTCATCGTTCAGTATCCCC...TTCAGCATAGCTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CCA 90 bp CACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGATCCATTGTATTGGCTaGTCTGACATCTGTACATTC +
Preference number: 2 (lower is better)
Translates to: HFDPVLAGFPRMLVPLQGIHCIG*SDICTF
Trigger: GAATGTACAGATGTCAGACCAGCCAATACAATGGAT...CCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR TCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTCATGCCAGTGCCTGGTaGATCTTTTATAGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: TTNILSAWAYAAASVLSSHASAW*IFYSLC
Trigger: GCAGAGGCTATAAAAGATTCACCAGGCACTGGCATG...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR GCA 90 bp GCATCTCCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTCCGGATTTCCAAGAATaGTGGTTCCACTGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: ASPSSSFIYDATVINPIVPDFQE*WFHCRG
Trigger: CCCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGG...AACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGGAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR TCA 90 bp ATCTTCAGTAACTCATTCTTTAGGTTAGGCATCATCTTCTGTAGGCCTTCTATCCTGGACACCACAAATTaGGGAGCTGCTCCTGTCTTC +
Preference number: 2 (lower is better)
Translates to: IFSNSFFRLGIIFCRPSILDTTN*GAAPVF
Trigger: GAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAG...GATAGAAGGCCTACAGAAGATGATGCCTAACCTAAAGAATGAGTTACTGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
3UTR-3UTR TCA 90 bp CTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTGATGTCTCAATGTACACATCTGTACATTCCTaGCATTTCCCTAGATACATT +
Preference number: 2 (lower is better)
Translates to: LRSRAFSPSNLGRDVSMYTSVHS*HFPRYI
Trigger: AATGTATCTAGGGAAATGTCAGGAATGTACAGATGT...GTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR GCA 90 bp GAAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAGCTATGCTGAACTTCGATCCTGTCCTTaGCGGATTTCCAAGAATGCT +
Preference number: 2 (lower is better)
Translates to: ETICSVCGSIRVFGSYAELRSCP*RISKNA
Trigger: AGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAG...TTCAGCATAGCTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR TCA 90 bp CCTGTTTACAGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAGAGTTCAACCAGATaGCGCTGTAATCTTTTTAGC +
Preference number: 2 (lower is better)
Translates to: PVYSEVFVGRPLGFHGNKQSSTR*RCNLFS
Trigger: GCTAAAAAGATTACAGCGTCATCTGGTTGAACTCTG...CTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACTGTAAACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR TCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAAGTACCCTGTTTACAGTaGGGTTTTTGTTGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: NALENWLVKDMICRQVAQVPCLQ*GFCWQA
Trigger: GGCCTGCCAACAAAAACCTCACTGTAAACAGGGTAC...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR TCA 90 bp GAAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAGCTATGCTGAATTGTATTGGCTGGTCTaGCATCTGTACATTCCTGAC +
Preference number: 2 (lower is better)
Translates to: ETICSVCGSIRVFGSYAELYWLV*HLYIPD
Trigger: GTCAGGAATGTACAGATGTCAGACCAGCCAATACAA...TTCAGCATAGCTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR GCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCCCAGCCATGACTTTGTaGTTTGACAAGGATTTCTAT +
Preference number: 2 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFPAMTL*FDKDFY
Trigger: ATAGAAATCCTTGTCAAAGCACAAAGTCATGGCTGG...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR CAA 90 bp CGCAGCAGCTTCGGTCCTTTCTTCTTCAGAAGCGGCTTTGTTGTCTaGCCTGTAATTTGCACATTTAGGCTCTGTAGTTTGTTTATAAAA +
Preference number: 2 (lower is better)
Translates to: RSSFGPFFFRSGFVV*PVICTFRLCSLFIK
Trigger: TTTTATAAACAAACTACAGAGCCTAAATGTGCAAATTACAGGCAAGACAACAAAGCCGCTTCTGAAGAAGAAAGGACCGAAGCTGCTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR TCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCACTTCATTGGAACAGATaGCGTAGTTTGGGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPLHWNR*RSLGVQ
Trigger: TTGAACACCCAAACTACGTCATCTGTTCCAATGAAG...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR GCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAAAGACTCTTTCTTCATaGCAGTGCCTGGTGAATCTT +
Preference number: 2 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPKTLSS*QCLVNL
Trigger: AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTT...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR GCA 90 bp GAAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAGCTATGCTGAAAACAATCCGATCCACTaGATCAGGATTCATCTGTGT +
Preference number: 2 (lower is better)
Translates to: ETICSVCGSIRVFGSYAENNPIH*IRIHLC
Trigger: ACACAGATGAATCCTGATGCAGTGGATCGGATTGTT...TTCAGCATAGCTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CCA 90 bp GAAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAGCTATGCTGAACACCAAGGCTTCCCTTaGTTTCACGTTAAATCCATT +
Preference number: 2 (lower is better)
Translates to: ETICSVCGSIRVFGSYAEHQGFP*FHVKSI
Trigger: AATGGATTTAACGTGAAACCAAGGGAAGCCTTGGTG...TTCAGCATAGCTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR TCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTCATGCCAGTGCCTGGTaGATCTTTTATAGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSHASAW*IFYSLC
Trigger: GCAGAGGCTATAAAAGATTCACCAGGCACTGGCATG...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR GCA 90 bp AGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAAACTATTAAGACTCTTTCTTCATaGCAGTGCCTGGTGAATCTT +
Preference number: 2 (lower is better)
Translates to: SEVFVGRPLGFHGNKQTIKTLSS*QCLVNL
Trigger: AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTT...AATAGTTTGCTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR GCA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTCACAAATTGAGGAGCTaGTCCTGTCTTCTATGTGCC +
Preference number: 2 (lower is better)
Translates to: CFDVAIVSLLIFEQGACIHKLRS*SCLLCA
Trigger: GGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTG...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482848.7
3UTR-3UTR TCA 90 bp AATGCCCCAGATATTGTGTACTTGAATCTCTTTGGTCTGATAAAGTATATGGGTCAGAGTTCAACCAGATaGCGCTGTAATCTTTTTAGC +
Preference number: 2 (lower is better)
Translates to: NAPDIVYLNLFGLIKYMGQSSTR*RCNLFS
Trigger: GCTAAAAAGATTACAGCGTCATCTGGTTGAACTCTG...ACCCATATACTTTATCAGACCAAAGAGATTCAAGTACACAATATCTGGGGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426342.7
3UTR-3UTR TCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATTTCCAATCTGGGTCGTaGTGTCTCAATGTACATATA +
Preference number: 2 (lower is better)
Translates to: NPQSILAHDEYSINVNYYFQSGS*CLNVHI
Trigger: TATATGTACATTGAGACATCACGACCCAGATTGGAA...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 72 bp GCGCTGCTGTCCAGCCTGCCTGATGCCCAACCGGTATaGAACAATCCGATCCACTGCATCAGGATTCATCTG +
Preference number: 3 (lower is better)
Translates to: ALLSSLPDAQPV*NNPIHCIRIHL
Trigger: CAGATGAATCCTGATGCAGTGGATCGGATTGTTGCATACCGGTTGGGCATCAGGCAGGCTGGACAGCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 72 bp GACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATaGTGGTTCCACTGCAGGGGGATACTGAACGATGAG +
Preference number: 3 (lower is better)
Translates to: DTSILSLPDFQE*WFHCRGILNDE
Trigger: CTCATCGTTCAGTATCCCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR CCA 72 bp ACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTaGTTCCACTGCAGGGGGATACTGAACGATGAGCTG +
Preference number: 3 (lower is better)
Translates to: TSILSLPDFQEC*FHCRGILNDEL
Trigger: CAGCTCATCGTTCAGTATCCCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp TATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTGACTTCAAGGTGGGAAGATTCCTaGAGACCAGCCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: YYSDEVLQPSSCPGLLTSRWEDS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAGGAATCTTCCCACCT...TGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 72 bp ACTCTGCAACTCATAGTGACACTTCGATCCTGTCCTTaGCGGATTTCCAAGAATGCTGGTTCCACTGCAGGG +
Preference number: 3 (lower is better)
Translates to: TLQLIVTLRSCP*RISKNAGSTAG
Trigger: CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGTCACTATGAGTTGCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp TATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTGACTTCATGTAATCCCAGCATTTaGAGAGGCGAAGGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: YYSDEVLQPSSCPGLLTSCNPSI*RGEGGK
Trigger: CTTCCCACCTTCGCCTCTCAAAATGCTGGGATTACA...TGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 72 bp CCTGAGAGTCAAATTGACCCGTCCGTAATAATTTATTaGCCAAGCGCCACTCATAGGTCAGCACCCGTATTG +
Preference number: 3 (lower is better)
Translates to: PESQIDPSVIIY*PSATHRSAPVL
Trigger: CAATACGGGTGCTGACCTATGAGTGGCGCTTGGGCAATAAATTATTACGGACGGGTCAATTTGACTCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR CCA 72 bp GGGATACTGAACGATGAGCTGCACCAAGGCTTCCCTTaGTTTCACGTTAAATCCATTGTATTGGCTGGTCTG +
Preference number: 3 (lower is better)
Translates to: GILNDELHQGFP*FHVKSIVLAGL
Trigger: CAGACCAGCCAATACAATGGATTTAACGTGAAACCAAGGGAAGCCTTGGTGCAGCTCATCGTTCAGTATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTACTTCGATCCTGTCCTaGCCGGATTTCCAAGAATGC +
Preference number: 3 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRTSILS*PDFQEC
Trigger: GCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGT...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp CTGCCATACTGGATTGTAGGTATCATAATAGAATTCTGGAGCATAGGCCTTTCCAGGTCAGCACCCGTATaGGATAGGCTCTCAGTACTC +
Preference number: 3 (lower is better)
Translates to: LPYWIVGIIIEFWSIGLSRSAPV*DRLSVL
Trigger: GAGTACTGAGAGCCTATCCAATACGGGTGCTGACCT...GGAAAGGCCTATGCTCCAGAATTCTATTATGATACCTACAATCCAGTATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCAAACCAGCCATGACTTaGTGCTTTGACAAGGATTTC +
Preference number: 3 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFKPAMT*CFDKDF
Trigger: GAAATCCTTGTCAAAGCACAAAGTCATGGCTGGTTT...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR CAA 90 bp TATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTGACTTCAAACAATATGCAGTGTTaGTGGGTCCATAAGGGTTTT +
Preference number: 3 (lower is better)
Translates to: YYSDEVLQPSSCPGLLTSNNMQC*WVHKGF
Trigger: AAAACCCTTATGGACCCACAAACACTGCATATTGTT...TGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCGTGCAAGCTTCTGAGTaGAAAATTATTCAGGCTTGT +
Preference number: 3 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFVQASE*KIIQAC
Trigger: ACAAGCCTGAATAATTTTCAACTCAGAAGCTTGCAC...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR CAA 90 bp GCATCTCCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTGATCCATCAGGCATaGCAACTTCTTTATCCGCTC +
Preference number: 3 (lower is better)
Translates to: ASPSSSFIYDATVINPIVLIHQA*QLLYPL
Trigger: GAGCGGATAAAGAAGTTGCAATGCCTGATGGATCAA...AACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGGAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR TCA 72 bp GGGCATGCATTTTTATTTTCACTGGACACCACAAATTaGGGAGCTGCTCCTGTCTTCTATGTGCCATGTATT +
Preference number: 3 (lower is better)
Translates to: GHAFLFSLDTTN*GAAPVFYVPCI
Trigger: AATACATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAAAATGCATGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482848.7
3UTR TCA 72 bp TCACACGAATTGTTGAATCTCCTTCACCAAATTTGGTaGGAGGAGTCAGTCGGACTTCATAAGCTTCTGGTT +
Preference number: 3 (lower is better)
Translates to: SHELLNLLHQIW*EESVGLHKLLV
Trigger: AACCAGAAGCTTATGAAGTCCGACTGACTCCTCTCACCAAATTTGGTGAAGGAGATTCAACAATTCGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR TCA 72 bp GAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTaGTGTCTCAATGTACATATAAAAACCTTCTTTGGA +
Preference number: 3 (lower is better)
Translates to: EKSSLFAFQSGS*CLNVHIKTFFG
Trigger: TCCAAAGAAGGTTTTTATATGTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 72 bp TTTCAGGCCCAGTTCCACTGTAGAGTTAGTATGCACTaGAATCCCAAACATTTTCTTGTTCCCTCTAAAGCT +
Preference number: 3 (lower is better)
Translates to: FQAQFHCRVSMH*NPKHFLVPSKA
Trigger: AGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAACTCTACAGTGGAACTGGGCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR CAA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCATAAAAGATGGTGGTTaGGTTTCTTCATTGGAACAG +
Preference number: 3 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFIKDGG*VSSLEQ
Trigger: CTGTTCCAATGAAGAAACCAAACCACCATCTTTTAT...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR CAA 90 bp CTGCCATACTGGATTGTAGGTATCATAATAGAATTCTGGAGCATAGGCCTTTCCAACTCTCCATTTGCATaGATCCATCAGGCATTGCAA +
Preference number: 3 (lower is better)
Translates to: LPYWIVGIIIEFWSIGLSNSPFA*IHQALQ
Trigger: TTGCAATGCCTGATGGATCAATGCAAATGGAGAGTT...GGAAAGGCCTATGCTCCAGAATTCTATTATGATACCTACAATCCAGTATGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR TCA 72 bp ATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTaGCTTCAAGTTTATAGTAGTTTAACTTCTCAAAAG +
Preference number: 3 (lower is better)
Translates to: MKCYSQVPAQVS*LQVYSSLTSQK
Trigger: CTTTTGAGAAGTTAAACTACTATAAACTTGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 72 bp AGATTTTTCAGGCCCAGTTCCACTGTAGAGTTAGTATaGACTGCAATCCCAAACATTTTCTTGTTCCCTCTA +
Preference number: 3 (lower is better)
Translates to: RFFRPSSTVELV*TAIPNIFLFPL
Trigger: TAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAACTCTACAGTGGAACTGGGCCTGAAAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR GCA 72 bp ATTTTTATTTTCACTGGACACCACAAATTGAGGAGCTaGTCCTGTCTTCTATGTGCCATGTATTGTTTCGGC +
Preference number: 3 (lower is better)
Translates to: IFIFTGHHKLRS*SCLLCAMYCFG
Trigger: GCCGAAACAATACATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482848.7
3UTR CCA 72 bp CTGCCATACTGGATTGTAGGTATCATAATAGAATTCTaGAGCATAGGCCTTTCCTGTAACAAGAAAGCTGCA +
Preference number: 3 (lower is better)
Translates to: LPYWIVGIIIEF*SIGLSCNKKAA
Trigger: TGCAGCTTTCTTGTTACAGGAAAGGCCTATGCTCCAGAATTCTATTATGATACCTACAATCCAGTATGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp GCATCTCCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTGTTAAATCCATTGTATaGGCTGGTCTGACATCTGTA +
Preference number: 3 (lower is better)
Translates to: ASPSSSFIYDATVINPIVVKSIV*AGLTSV
Trigger: TACAGATGTCAGACCAGCCAATACAATGGATTTAAC...AACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGGAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATTCTCCTTCACCAAATTaGGTGAGAGGAGTCAGTCGG +
Preference number: 3 (lower is better)
Translates to: NPQSILAHDEYSINVNYYSPSPN*VRGVSR
Trigger: CCGACTGACTCCTCTCACCAAATTTGGTGAAGGAGA...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR-3UTR CAA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAATAAAAGATGGTGGTTaGGTTTCTTCATTGGAACAG +
Preference number: 3 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPIKDGG*VSSLEQ
Trigger: CTGTTCCAATGAAGAAACCAAACCACCATCTTTTAT...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR-3UTR CAA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGAGTGCAAGCTTCTGAGTaGAAAATTATTCAGGCTTGT +
Preference number: 3 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGVQASE*KIIQAC
Trigger: ACAAGCCTGAATAATTTTCAACTCAGAAGCTTGCAC...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426342.7
3UTR TCA 72 bp CTTGGTTTCACGTTAAATCCATTGTATTGGCTGGTCTaGCATCTGTACATTCCTGACATTTCCCTAGATACA +
Preference number: 3 (lower is better)
Translates to: LGFTLNPLYWLV*HLYIPDISLDT
Trigger: TGTATCTAGGGAAATGTCAGGAATGTACAGATGTCAGACCAGCCAATACAATGGATTTAACGTGAAACCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 72 bp AATTCTCTACGAAAACCTTCTCGTAAGGAAAATAAATaGCAGCTCTTCACGTACCCTGTTTACAGTGAGGTT +
Preference number: 3 (lower is better)
Translates to: NSLRKPSRKENK*QLFTYPVYSEV
Trigger: AACCTCACTGTAAACAGGGTACGTGAAGAGCTGGCATTTATTTTCCTTACGAGAAGGTTTTCGTAGAGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR CCA 72 bp ACTGTAAGAATAAACACGGTGTCTGTTCTGCCATACTaGATTGTAGGTATCATAATAGAATTCTGGAGCATA +
Preference number: 3 (lower is better)
Translates to: TVRINTVSVLPY*IVGIIIEFWSI
Trigger: TATGCTCCAGAATTCTATTATGATACCTACAATCCAGTATGGCAGAACAGACACCGTGTTTATTCTTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR GCA 72 bp TTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTaGATCAGGGAGTTCCTATTAAAATTTCTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: LTAFCMYYNIGE*IREFLLKFLSA
Trigger: TGCAGAAAGAAATTTTAATAGGAACTCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426342.7
3UTR CCA 72 bp ACAGGTTTAAGTGAAATTTACAATGCATTGGAAAACTaGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCT +
Preference number: 3 (lower is better)
Translates to: TGLSEIYNALEN*LVKDMICRQVA
Trigger: AGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATTGTAAATTTCACTTAAACCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR CCA 72 bp TTGAAAATTATTCAGGCTTGTTTCATTGAAGGCACTTaGTTTCCATGGCAATTTATAAAAGATGGTGGTTTG +
Preference number: 3 (lower is better)
Translates to: LKIIQACFIEGT*FPWQFIKDGGL
Trigger: CAAACCACCATCTTTTATAAATTGCCATGGAAACCAAGTGCCTTCAATGAAACAAGCCTGAATAATTTTCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGCGCCTCCTCGGCTTTaGCACTCACTCTGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGAPPRL*HSLWPR
Trigger: GCGCGGCCAGAGTGAGTGCCAAAGCCGAGGAGGCGC...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCACGGGCCAAGCCGAGGTaGCCGGGAACCGCTCGCCGA +
Preference number: 4 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPRAKPR*PGTARR
Trigger: TCGGCGAGCGGTTCCCGGGCACCTCGGCTTGGCCCG...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGCACAATACGAACCGTaGGAGGAGCTGCCTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGAQYEP*EELPGN
Trigger: GTTGCCAGGCAGCTCCTCCCACGGTTCGTATTGTGC...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCGCAGGAAGTGGCCTCTaGCCCAGGACACCGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFAGSGL*PRTPSR
Trigger: CCTGCTCGGTGTCCTGGGTCAGAGGCCACTTCCTGC...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR GCA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGCCGGATTTCCAAGAATaGTGGTTCCACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGPDFQE*WFHCRG
Trigger: CCCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGG...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGTGCAGCAAGACCTCCTaGCCACGTCTCCAGCTATAC +
Preference number: 4 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGCSKTS*PRLQLY
Trigger: GTATAGCTGGAGACGTGGCCAGGAGGTCTTGCTGCA...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp TATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTGACTTCAGCTGTCCAGCCTGCCTaGTGCCCAACCGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: YYSDEVLQPSSCPGLLTSAVQPA*CPTGMQ
Trigger: TTGCATACCGGTTGGGCATCAGGCAGGCTGGACAGC...TGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp CTGCCTGATGCCCAACCGGTATGCAACAATCCGATCCACTGCATCAGGATTCATCAGGCCAAGCCTGAGTaGACAATACGAACCGTGGGA +
Preference number: 4 (lower is better)
Translates to: LPDAQPVCNNPIHCIRIHQAKPE*TIRTVG
Trigger: TCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTG...ATGAATCCTGATGCAGTGGATCGGATTGTTGCATACCGGTTGGGCATCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTCCGAGGAGCAGGAAGTaGCCTCTGACCCAGGACACC +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSPRSRK*PLTQDT
Trigger: GGTGTCCTGGGTCAGAGGCCACTTCCTGCTCCTCGG...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR TCA 90 bp CACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGCTTCACCAAATTTGGTaGGAGGAGTCAGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: HFDPVLAGFPRMLVPLQGLHQIW*EESVGL
Trigger: AAGTCCGACTGACTCCTCTCACCAAATTTGGTGAAG...CCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp CACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGTGTCTCCTTCTCTGGTaGCCAATGGTGATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: HFDPVLAGFPRMLVPLQGCLLLW*PMVIFP
Trigger: AGGAAAAATCACCATTGGTCACCAGAGAAGGAGACA...CCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTGGGGATACTGAACGATaGGCTGCACCAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRGDTER*AAPRLP
Trigger: GGGAAGCCTTGGTGCAGCTCATCGTTCAGTATCCCC...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp GAAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAGCTATGCTGAATGCTCCCACCAGCGCTaGTGTCCAGCCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: ETICSVCGSIRVFGSYAECSHQR*CPACLM
Trigger: CATCAGGCAGGCTGGACAGCAGCGCTGGTGGGAGCA...TTCAGCATAGCTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTCGTCTGGAGCTCGCTTaGGCACACCAGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFRLELA*AHQPSR
Trigger: GCGGCTGGGCTGGTGTGCCCAAGCGAGCTCCAGACG...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR TCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAGCTGTCCAGCCTGCCTaGTGCCCAACCGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPAVQPA*CPTGMQ
Trigger: TTGCATACCGGTTGGGCATCAGGCAGGCTGGACAGC...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCCAGGCCAAGCCTGAGTaGACAATACGAACCGTGGGA +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFQAKPE*TIRTVG
Trigger: TCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTG...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTGATGTCTCAATGTACGAATGCTGGTTCCACTaGAGGGGGATACTGAACGAT +
Preference number: 4 (lower is better)
Translates to: LRSRAFSPSNLGRDVSMYECWFH*RGILND
Trigger: ATCGTTCAGTATCCCCCTGCAGTGGAACCAGCATTC...GTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCGGTCCACCTGATCTGTaGACGTGGATGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFGPPDL*TWMSCD
Trigger: GTCACAGGACATCCACGTCCACAGATCAGGTGGACC...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTGATGTCTCAATGTACGGTCAGCACCCGTATTaGATAGGCTCTCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: LRSRAFSPSNLGRDVSMYGQHPY*IGSQYS
Trigger: AGAGTACTGAGAGCCTATCCAATACGGGTGCTGACC...GTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAACTCACACCGGGTGCCTaGGAAAATCGCAGACGCCGG +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGELTPGA*ENRRRR
Trigger: CCGGCGTCTGCGATTTTCCCAGGCACCCGGTGTGAG...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTGAGGTGACAGCCAGCTaGCAGCCCTCACAGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PSSSFIYDATVINPIVFIEVTAS*QPSQPS
Trigger: GGAGGGCTGTGAGGGCTGCCAGCTGGCTGTCACCTC...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
3UTR CAA 72 bp TACTCTGCAACTCATAGTGACACTTCGATCCTGTCCTaGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: YSATHSDTSILS*PDFQECWFHCR
Trigger: CCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGTCACTATGAGTTGCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAGCTGTCCAGCCTGCCTaGTGCCCAACCGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGEAVQPA*CPTGMQ
Trigger: TTGCATACCGGTTGGGCATCAGGCAGGCTGGACAGC...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CCGTATTGGATAGGCTCTCAGTACTCTGCAACTCATAGTGACACTTCGATCCTGTCTGGTGACCAATGGTaGTTTTTCCTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PYWIGSQYSATHSDTSILSGDQW*FFLCCW
Trigger: CCAGCAGCACAGGAAAAATCACCATTGGTCACCAGA...CAGGATCGAAGTGTCACTATGAGTTGCAGAGTACTGAGAGCCTATCCAATACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGTGTCTGCCATCTGGTTaGAGATACTATGTATGTTGC +
Preference number: 4 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGCLPSG*RYYVCC
Trigger: GCAACATACATAGTATCTTCAACCAGATGGCAGACA...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp CCGTATTGGATAGGCTCTCAGTACTCTGCAACTCATAGTGACACTTCGATCCTGCCTTTATCAGATCCTTaGAGCAAGACCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PYWIGSQYSATHSDTSILPLSDP*SKTSWP
Trigger: TGGCCAGGAGGTCTTGCTGCAAGGATCTGATAAAGG...CAGGATCGAAGTGTCACTATGAGTTGCAGAGTACTGAGAGCCTATCCAATACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp CCTGTTTACAGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCCGGATTTCCAAGAATaGTGGTTCCACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PVYSEVFVGRPLGFHGNKPDFQE*WFHCRG
Trigger: CCCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGG...CTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACTGTAAACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTATGCTCCCACCAGCGCTaGTGTCCAGCCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLCSHQR*CPACLM
Trigger: CATCAGGCAGGCTGGACAGCAGCGCTGGTGGGAGCA...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGACAGGGAGCGGAGTGTaGGTCTGGAGCTCGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLTGSGV*VWSSLG
Trigger: CCCAAGCGAGCTCCAGACGCACACTCCGCTCCCTGT...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp CCGTATTGGATAGGCTCTCAGTACTCTGCAACTCATAGTGACACTTCGATCCTGCAGGAGGATTGGAATTaGCAACACACCGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: PYWIGSQYSATHSDTSILQEDWN*QHTGGT
Trigger: TGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTG...CAGGATCGAAGTGTCACTATGAGTTGCAGAGTACTGAGAGCCTATCCAATACGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp CACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGTATAAAAACCTTCTTTaGAGCCACTACGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: HFDPVLAGFPRMLVPLQGYKNLL*SHYGQH
Trigger: ATGCTGACCGTAGTGGCTCCAAAGAAGGTTTTTATA...CCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAAAGCGTAGAGGTGCTCTaGCCGGCCGCACCAATTCCC +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQSVEVL*PAAPIP
Trigger: GGGAATTGGTGCGGCCGGCCAGAGCACCTCTACGCT...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTAAGCGGAGTGTGCGTCTaGAGCTCGCTTGGGCACACC +
Preference number: 4 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLSGVCV*SSLGHT
Trigger: GGTGTGCCCAAGCGAGCTCCAGACGCACACTCCGCT...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTCGCGCGGTAGGAGCCTaGCTTGGACAGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSRAVGA*LGQPRS
Trigger: GCTCCTCGGCTGTCCAAGCCAGGCTCCTACCGCGCG...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR TCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTAGTACCAGCATCATCTaGGGTGATGGCAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSSTSII*GDGRYG
Trigger: ACCATACCTGCCATCACCTCAGATGATGCTGGTACT...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTTTATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCAGGCCAAGCCTGAGTaGACAATACGAACCGTGGGA +
Preference number: 4 (lower is better)
Translates to: FYFHWTPQIEELLLSSMCQAKPE*TIRTVG
Trigger: TCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTG...GCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR GCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTCCCCAAGCCATTCTCTaGTTTACAGTAATACCGGCC +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRPQAIL*FTVIPA
Trigger: GGCCGGTATTACTGTAAAGCAGAGAATGGCTTGGGG...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp ACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATGTATTGTTCCTCCCTTCAGAGATaGTACACATGTGTACGTCCC +
Preference number: 4 (lower is better)
Translates to: TGHHKLRSCSCLLCAMYCSSLQR*YTCVRP
Trigger: GGGACGTACACATGTGTAGCATCTCTGAAGGGAGGA...ACAATACATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR GCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTTCCTCCCTTCAGAGATaGTACACATGTGTACGTCCC +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRSSLQR*YTCVRP
Trigger: GGGACGTACACATGTGTAGCATCTCTGAAGGGAGGA...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTGAATGCTGGTTCCACTaGAGGGGGATACTGAACGAT +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSECWFH*RGILND
Trigger: ATCGTTCAGTATCCCCCTGCAGTGGAACCAGCATTC...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCGAATGCTGGTTCCACTaGAGGGGGATACTGAACGAT +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFECWFH*RGILND
Trigger: ATCGTTCAGTATCCCCCTGCAGTGGAACCAGCATTC...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTTGGTTTCTTCATTGGAACAGATGACGTAGTTTGGGTGTTCAAGTGGCCGCAAGATGCCCAACCGGTATaGAACAATCCGATCCACTGC +
Preference number: 4 (lower is better)
Translates to: FGFFIGTDDVVWVFKWPQDAQPV*NNPIHC
Trigger: GCAGTGGATCGGATTGTTGCATACCGGTTGGGCATC...TTGCGGCCACTTGAACACCCAAACTACGTCATCTGTTCCAATGAAGAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTTGCTCCCACCAGCGCTaGTGTCCAGCCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTCSHQR*CPACLM
Trigger: CATCAGGCAGGCTGGACAGCAGCGCTGGTGGGAGCA...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTCGCACTCACACCGGGTaGCTGGGAAAATCGCAGACG +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFRTHTG*LGKSQT
Trigger: CGTCTGCGATTTTCCCAGGCACCCGGTGTGAGTGCG...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp GCATCTCCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTGGTCCACCTGATCTGTaGACGTGGATGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: ASPSSSFIYDATVINPIVGPPDL*TWMSCD
Trigger: GTCACAGGACATCCACGTCCACAGATCAGGTGGACC...AACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTACCGAACAGGAGGATTaGAATTGGCAACACACCGGA +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRTEQED*NWQHTG
Trigger: TCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGT...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGATCCATTGTATTGGCTaGTCTGACATCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGIHCIG*SDICTF
Trigger: GAATGTACAGATGTCAGACCAGCCAATACAATGGAT...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp GCTGCTCCTGTCTTCTATGTGCCATGTATTGTTTCGGCTATTGAGATTATAGCAGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGT +
Preference number: 4 (lower is better)
Translates to: AAPVFYVPCIVSAIEIIAVTGQA*VHNTNR
Trigger: ACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAAC...TGCTATAATCTCAATAGCCGAAACAATACATGGCACATAGAAGACAGGAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTTACATCCACTCTGATTaGCTTTATCGCTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRYIHSD*LYRWRP
Trigger: GGGTCTCCAGCGATAAAGTCAATCAGAGTGGATGTA...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGACATACATTCCTCACTaGAGCAATGCAGCTATAATT +
Preference number: 4 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGTYIPH*SNAAII
Trigger: AATTATAGCTGCATTGCTTCAGTGAGGAATGTATGT...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp TATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTGACTTCATTGTATTGGCTGGTCTaGCATCTGTACATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: YYSDEVLQPSSCPGLLTSLYWLV*HLYIPD
Trigger: GTCAGGAATGTACAGATGTCAGACCAGCCAATACAA...TGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGGGGATACTGAACGATaGGCTGCACCAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLGDTER*AAPRLP
Trigger: GGGAAGCCTTGGTGCAGCTCATCGTTCAGTATCCCC...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAAGGGGATACTGAACGATaGGCTGCACCAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQGDTER*AAPRLP
Trigger: GGGAAGCCTTGGTGCAGCTCATCGTTCAGTATCCCC...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTCAGGCCAAGCCTGAGTaGACAATACGAACCGTGGGA +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLQAKPE*TIRTVG
Trigger: TCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTG...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAGATGCCCAACCGGTATaGAACAATCCGATCCACTGC +
Preference number: 4 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPDAQPV*NNPIHC
Trigger: GCAGTGGATCGGATTGTTGCATACCGGTTGGGCATC...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTTGCTCCCACCAGCGCTaGTGTCCAGCCTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFCSHQR*CPACLM
Trigger: CATCAGGCAGGCTGGACAGCAGCGCTGGTGGGAGCA...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CCGTATTGGATAGGCTCTCAGTACTCTGCAACTCATAGTGACACTTCGATCCTGTTTATTTTAATCTCCTaGTCCCACCAGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PYWIGSQYSATHSDTSILFILIS*SHQRCC
Trigger: ACAGCAGCGCTGGTGGGAGCAGGAGATTAAAATAAA...CAGGATCGAAGTGTCACTATGAGTTGCAGAGTACTGAGAGCCTATCCAATACGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp GCTGCTCCTGTCTTCTATGTGCCATGTATTGTTTCGGCTATTGAGATTATAGCAGTCAGAGGCACTTCCTaGTGTTTTGGTCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: AAPVFYVPCIVSAIEIIAVRGTS*CFGPPV
Trigger: CACAGGTGGACCAAAACAGCAGGAAGTGCCTCTGAC...TGCTATAATCTCAATAGCCGAAACAATACATGGCACATAGAAGACAGGAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR GCA 90 bp GCATCTCCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTAACCGTGGGAGGAGCTaGCTGGCAACATTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASPSSSFIYDATVINPIVNRGRS*LATFFF
Trigger: GAAGAAGAATGTTGCCAGGCAGCTCCTCCCACGGTT...AACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGGAGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp TATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTGACTTCAATTACAGTGATGAAGTaGTACAGCCAAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: YYSDEVLQPSSCPGLLTSITVMK*YSQVPA
Trigger: GGCAGGAACTTGGCTGTAGCACTTCATCACTGTAAT...TGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp CCTGTTTACAGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAGGAGGATTGGAATTaGCAACACACCGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: PVYSEVFVGRPLGFHGNKQEDWN*QHTGGT
Trigger: TGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTG...CTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACTGTAAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TTTATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCCAGGAGGATTGGAATTaGCAACACACCGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: FIFTGHHKLRSCSCLLCAQEDWN*QHTGGT
Trigger: TGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTG...GGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp TATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATACCGAACAGGAGGATTaGAATTGGCAACACACCGGA +
Preference number: 4 (lower is better)
Translates to: YFHWTPQIEELLLSSMCHTEQED*NWQHTG
Trigger: TCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGT...ATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp CTGCCTGATGCCCAACCGGTATGCAACAATCCGATCCACTGCATCAGGATTCATGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: LPDAQPVCNNPIHCIRIHGTAST*QDIFTS
Trigger: TGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCC...ATGAATCCTGATGCAGTGGATCGGATTGTTGCATACCGGTTGGGCATCAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp CTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTGATGTCTCAATGTACCACCAAGGCTTCCCTTaGTTTCACGTTAAATCCATT +
Preference number: 4 (lower is better)
Translates to: LRSRAFSPSNLGRDVSMYHQGFP*FHVKSI
Trigger: AATGGATTTAACGTGAAACCAAGGGAAGCCTTGGTG...GTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTGATTTCCAAGAATGCTaGTTCCACTGCAGGGGGATA +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRDFQEC*FHCRGI
Trigger: TATCCCCCTGCAGTGGAACCAGCATTCTTGGAAATC...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp CCGTATTGGATAGGCTCTCAGTACTCTGCAACTCATAGTGACACTTCGATCCTGTTTCGCCTTCCAATCTaGGTCGTGATGTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: PYWIGSQYSATHSDTSILFRLPI*VVMSQC
Trigger: ACATTGAGACATCACGACCCAGATTGGAAGGCGAAA...CAGGATCGAAGTGTCACTATGAGTTGCAGAGTACTGAGAGCCTATCCAATACGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCAATATCTTGTCTGCATaGGCTTACGCAGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFNILSA*AYAAAS
Trigger: CGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATT...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CTGCACCAAGGCTTCCCTTGGTTTCACGTTAAATCCATTGTATTGGCTGGTCTGCCTCCTTGGTGTCGCTaGATATTTGTAATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LHQGFPWFHVKSIVLAGLPPWCR*IFVILK
Trigger: TTTGAGGATTACAAATATTCAGCGACACCAAGGAGG...CAGACCAGCCAATACAATGGATTTAACGTGAAACCAAGGGAAGCCTTGGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp TTTATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCTACATCCACTCTGATTaGCTTTATCGCTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: FIFTGHHKLRSCSCLLCAYIHSD*LYRWRP
Trigger: GGGTCTCCAGCGATAAAGTCAATCAGAGTGGATGTA...GGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTGCTGTCCAGCCTGCCTaGTGCCCAACCGGTATGCAA +
Preference number: 4 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLAVQPA*CPTGMQ
Trigger: TTGCATACCGGTTGGGCATCAGGCAGGCTGGACAGC...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCCTTTATTCCCACTTaGAGACCACAGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSSFIPT*RPQWIL
Trigger: GAGAATCCACTGTGGTCTTCAAGTGGGAATAAAGGA...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGCAGGCCAAGCCTGAGTaGACAATACGAACCGTGGGA +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLQAKPE*TIRTVG
Trigger: TCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTG...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTTTATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCCCCAAGCCATTCTCTaGTTTACAGTAATACCGGCC +
Preference number: 4 (lower is better)
Translates to: FYFHWTPQIEELLLSSMCPQAIL*FTVIPA
Trigger: GGCCGGTATTACTGTAAAGCAGAGAATGGCTTGGGG...GCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR GCA 90 bp CTGCCTGATGCCCAACCGGTATGCAACAATCCGATCCACTGCATCAGGATTCATCATTATTATTGGCAATaGAGCTGTAAGTACCAGCAT +
Preference number: 4 (lower is better)
Translates to: LPDAQPVCNNPIHCIRIHHYYWQ*SCKYQH
Trigger: ATGCTGGTACTTACAGCTGCATTGCCAATAATAATG...ATGAATCCTGATGCAGTGGATCGGATTGTTGCATACCGGTTGGGCATCAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTACCGGATTTCCAAGAATaGTGGTTCCACTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLPDFQE*WFHCRG
Trigger: CCCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGG...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CCGTATTGGATAGGCTCTCAGTACTCTGCAACTCATAGTGACACTTCGATCCTGTCCGTAATAATTTATTaGCCAAGCGCCACTCATAGG +
Preference number: 4 (lower is better)
Translates to: PYWIGSQYSATHSDTSILSVIIY*PSATHR
Trigger: CCTATGAGTGGCGCTTGGGCAATAAATTATTACGGA...CAGGATCGAAGTGTCACTATGAGTTGCAGAGTACTGAGAGCCTATCCAATACGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCTTTATTTTAATCTCCTaGTCCCACCAGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFFILIS*SHQRCC
Trigger: ACAGCAGCGCTGGTGGGAGCAGGAGATTAAAATAAA...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCCAGCCCTGCTGTCTTaGCTTCCCCCATTCCATCAG +
Preference number: 4 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTPALLS*LPPFHQ
Trigger: CTGATGGAATGGGGGAAGGCAAGACAGCAGGGCTGG...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR GCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGATGGGAAGGGGAGCTaGGAGGCGAAGTGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFDGKGS*EAKCSS
Trigger: TGAAGAACACTTCGCCTCGCAGCTCCCCTTCCCATC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCGGTCCACCTGATCTGTaGACGTGGATGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASAGPPDL*TWMSCD
Trigger: GTCACAGGACATCCACGTCCACAGATCAGGTGGACC...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp ATCTTCAGTAACTCATTCTTTAGGTTAGGCATCATCTTCTGTAGGCCTTCTATCTGCAGCAAGACCTCCTaGCCACGTCTCCAGCTATAC +
Preference number: 4 (lower is better)
Translates to: IFSNSFFRLGIIFCRPSICSKTS*PRLQLY
Trigger: GTATAGCTGGAGACGTGGCCAGGAGGTCTTGCTGCA...GATAGAAGGCCTACAGAAGATGATGCCTAACCTAAAGAATGAGTTACTGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp CTGCCTGATGCCCAACCGGTATGCAACAATCCGATCCACTGCATCAGGATTCATCACATACTAATGTTATaGCCTCTCCAGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: LPDAQPVCNNPIHCIRIHHILML*PLQDLQ
Trigger: TTGTAAATCCTGGAGAGGCCATAACATTAGTATGTG...ATGAATCCTGATGCAGTGGATCGGATTGTTGCATACCGGTTGGGCATCAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTGTGGAACAGTCAGATTaGGTGGAACTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLVEQSD*VELCCW
Trigger: CCAGCAGCACAGTTCCACCCAATCTGACTGTTCCAC...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTGATGTCTCAATGTACAGACCAAAGGATGATTaGTTTAGGTTTGCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LRSRAFSPSNLGRDVSMYRPKDD*FRFASY
Trigger: GTAACTGGCAAACCTAAACCAATCATCCTTTGGTCT...GTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCTTTCGCCTTCCAATCTaGGTCGTGATGTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFFRLPI*VVMSQC
Trigger: ACATTGAGACATCACGACCCAGATTGGAAGGCGAAA...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CCTGTTTACAGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAGGGCTCTCTTGCCTaGATTCGCCTTTACAAAGTA +
Preference number: 4 (lower is better)
Translates to: PVYSEVFVGRPLGFHGNKQGSLA*IRLYKV
Trigger: TACTTTGTAAAGGCGAATCCAGGCAAGAGAGCCCTG...CTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACTGTAAACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTGGAGCGTACACTCCTTaGCCAGAGATCCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFGAYTP*PEIPSR
Trigger: CCTGGAGGGGATCTCTGGCCAAGGAGTGTACGCTCC...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR TCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGT +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFVTGQA*VHNTNR
Trigger: ACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAAC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAAGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGT +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQVTGQA*VHNTNR
Trigger: ACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAAC...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGT +
Preference number: 4 (lower is better)
Translates to: PSSSFIYDATVINPIVFIVTGQA*VHNTNR
Trigger: ACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAAC...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp ATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATGCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: IFTGHHKLRSCSCLLCAMLIEDT*VLESVR
Trigger: TCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAG...CATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp ACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATGTATTGTTCCTCAAAGTCTCATTaGAGACACTTGAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TGHHKLRSCSCLLCAMYCSSKSH*RHLSLG
Trigger: TCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGA...ACAATACATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTTCCTCAAAGTCTCATTaGAGACACTTGAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRSSKSH*RHLSLG
Trigger: TCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGA...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAACAGCATCATCTGAGGTaGTGGCAGGTATGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGEQHHLR*WQVWSK
Trigger: CTTTGACCATACCTGCCATCACCTCAGATGATGCTG...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTGGGGATACTGAACGATaGGCTGCACCAAGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSGDTER*AAPRLP
Trigger: GGGAAGCCTTGGTGCAGCTCATCGTTCAGTATCCCC...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTCTTCATTGGAACAGATaGCGTAGTTTGGGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSLHWNR*RSLGVQ
Trigger: TTGAACACCCAAACTACGTCATCTGTTCCAATGAAG...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAAGACACTGGACACCACAAATTaGGGAGCTGCTCCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PLYCKQIGTSKVSFGLKTLDTTN*GAAPVF
Trigger: GAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAG...TGTCTTCAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR GCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTAACAATCCGATCCACTaGATCAGGATTCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSNNPIH*IRIHLC
Trigger: ACACAGATGAATCCTGATGCAGTGGATCGGATTGTT...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTGATGTCTCAATGTACAAGATTATGAGTGTCTaGCATCTGGTTGAAGATACT +
Preference number: 4 (lower is better)
Translates to: LRSRAFSPSNLGRDVSMYKIMSV*HLVEDT
Trigger: AGTATCTTCAACCAGATGGCAGACACTCATAATCTT...GTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAACCGAACAGGAGGATTaGAATTGGCAACACACCGGA +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGETEQED*NWQHTG
Trigger: TCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGT...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAAACTATTACCGAACAGGAGGATTaGAATTGGCAACACACCGGA +
Preference number: 4 (lower is better)
Translates to: SEVFVGRPLGFHGNKQTITEQED*NWQHTG
Trigger: TCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGT...AATAGTTTGCTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTGCAGCAAGACCTCCTaGCCACGTCTCCAGCTATAC +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLCSKTS*PRLQLY
Trigger: GTATAGCTGGAGACGTGGCCAGGAGGTCTTGCTGCA...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACATGCAGCAAGACCTCCTaGCCACGTCTCCAGCTATAC +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTCSKTS*PRLQLY
Trigger: GTATAGCTGGAGACGTGGCCAGGAGGTCTTGCTGCA...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CCGTATTGGATAGGCTCTCAGTACTCTGCAACTCATAGTGACACTTCGATCCTGACCCTGGGTAAAGAATaGTTCATAAATCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PYWIGSQYSATHSDTSILTLGKE*FINLNS
Trigger: GGAGTTGAGATTTATGAACCATTCTTTACCCAGGGT...CAGGATCGAAGTGTCACTATGAGTTGCAGAGTACTGAGAGCCTATCCAATACGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTGTGGAACAGTCAGATTaGGTGGAACTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFVEQSD*VELCCW
Trigger: CCAGCAGCACAGTTCCACCCAATCTGACTGTTCCAC...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTCACCAAGGCTTCCCTTaGTTTCACGTTAAATCCATT +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSHQGFP*FHVKSI
Trigger: AATGGATTTAACGTGAAACCAAGGGAAGCCTTGGTG...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGCACAATACGAACCGTaGGAGGAGCGTACACTCCTT +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFAQYEP*EERTLL
Trigger: AAGGAGTGTACGCTCCTCCCACGGTTCGTATTGTGC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGAGTTTGGGTGTTCAAGTaGCCGCAAGCAAACTCCGAT +
Preference number: 4 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGVWVFK*PQANSD
Trigger: ATCGGAGTTTGCTTGCGGCCACTTGAACACCCAAAC...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp CCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAAGACACACTTCCTGCTGTTTTaGTCCACCTGTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: PLYCKQIGTSKVSFGLKTHFLLF*STCGRG
Trigger: TCCACGTCCACAGGTGGACCAAAACAGCAGGAAGTG...TGTCTTCAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp CCTGTTTACAGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: PVYSEVFVGRPLGFHGNKLIEDT*VLESVR
Trigger: TCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAG...CTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACTGTAAACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp ATCTTCAGTAACTCATTCTTTAGGTTAGGCATCATCTTCTGTAGGCCTTCTATCCAGCATCATCTGAGGTaGTGGCAGGTATGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: IFSNSFFRLGIIFCRPSIQHHLR*WQVWSK
Trigger: CTTTGACCATACCTGCCATCACCTCAGATGATGCTG...GATAGAAGGCCTACAGAAGATGATGCCTAACCTAAAGAATGAGTTACTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTCAGCATCATCTGAGGTaGTGGCAGGTATGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: PSSSFIYDATVINPIVFIQHHLR*WQVWSK
Trigger: CTTTGACCATACCTGCCATCACCTCAGATGATGCTG...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTAGTACCAGCATCATCTaGGGTGATGGCAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFSTSII*GDGRYG
Trigger: ACCATACCTGCCATCACCTCAGATGATGCTGGTACT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTAGTACCAGCATCATCTaGGGTGATGGCAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: PSSSFIYDATVINPIVFISTSII*GDGRYG
Trigger: ACCATACCTGCCATCACCTCAGATGATGCTGGTACT...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTCTTCACCAAATTTGGTaGGAGGAGTCAGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLLHQIW*EESVGL
Trigger: AAGTCCGACTGACTCCTCTCACCAAATTTGGTGAAG...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCCATGCCAGTGCCTGGTaGATCTTTTATAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASAHASAW*IFYSLC
Trigger: GCAGAGGCTATAAAAGATTCACCAGGCACTGGCATG...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TTTGGTTTCTTCATTGGAACAGATGACGTAGTTTGGGTGTTCAAGTGGCCGCAACAGAGTTCAACCAGATaGCGCTGTAATCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: FGFFIGTDDVVWVFKWPQQSSTR*RCNLFS
Trigger: GCTAAAAAGATTACAGCGTCATCTGGTTGAACTCTG...TTGCGGCCACTTGAACACCCAAACTACGTCATCTGTTCCAATGAAGAAACCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp ACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATGTATTGTGATTATAGCAATGAGTaGTGCAGACAAAGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: TGHHKLRSCSCLLCAMYCDYSNE*CRQSLR
Trigger: TCTGAGACTTTGTCTGCATCACTCATTGCTATAATC...ACAATACATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATGGTGGGAAGATTCCTTaGGACCAGCCTGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: NPQSILAHDEYSINVNYYGGKIP*DQPGQH
Trigger: ATGTTGCCCAGGCTGGTCTCAAGGAATCTTCCCACC...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTGTCAGAGGCACTTCCTaGTGTTTTGGTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFVRGTS*CFGPPD
Trigger: ATCAGGTGGACCAAAACAGCAGGAAGTGCCTCTGAC...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCGTCAGAGGCACTTCCTaGTGTTTTGGTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASAVRGTS*CFGPPD
Trigger: ATCAGGTGGACCAAAACAGCAGGAAGTGCCTCTGAC...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGCCCCAAGCCATTCTCTaGTTTACAGTAATACCGGCC +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLPQAIL*FTVIPA
Trigger: GGCCGGTATTACTGTAAAGCAGAGAATGGCTTGGGG...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTCCTTTATCAGATCCTTaGAGCAAGACCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFPLSDP*SKTSWP
Trigger: TGGCCAGGAGGTCTTGCTGCAAGGATCTGATAAAGG...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTCCTCCCTTCAGAGATaGTACACATGTGTACGTCCC +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASASSLQR*YTCVRP
Trigger: GGGACGTACACATGTGTAGCATCTCTGAAGGGAGGA...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTGATGCCCAACCGGTATaGAACAATCCGATCCACTGC +
Preference number: 4 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTDAQPV*NNPIHC
Trigger: GCAGTGGATCGGATTGTTGCATACCGGTTGGGCATC...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTGAAGCTGAAACAATATaGAGTGTTTGTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTREAETI*SVCGSI
Trigger: TATGGACCCACAAACACTGCATATTGTTTCAGCTTC...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGCCCCATTCCATCAGTTaGCATTGCAACGCCAATCCT +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLPHSIS*HCNANP
Trigger: AGGATTGGCGTTGCAATGGCAACTGATGGAATGGGG...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCGGTCCACCTGATCTGTaGACGTGGATGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHAGPPDL*TWMSCD
Trigger: GTCACAGGACATCCACGTCCACAGATCAGGTGGACC...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTCAGGAGGATTGGAATTaGCAACACACCGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFQEDWN*QHTGGT
Trigger: TGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTG...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAACAGGAGGATTGGAATTaGCAACACACCGGAGGAACA +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQQEDWN*QHTGGT
Trigger: TGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTG...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCTGCAGCAAGACCTCCTaGCCACGTCTCCAGCTATAC +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHACSKTS*PRLQLY
Trigger: GTATAGCTGGAGACGTGGCCAGGAGGTCTTGCTGCA...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTTTTGTGATAAGGATCTaGTGTGATCCAAAATCGTCC +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRFVIRI*CDPKSS
Trigger: GGACGATTTTGGATCACACCAGATCCTTATCACAAA...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGGTCAGCACCCGTATTaGATAGGCTCTCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFGQHPY*IGSQYS
Trigger: AGAGTACTGAGAGCCTATCCAATACGGGTGCTGACC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCAATATGCAGTGTTTGTaGGTCCATAAGGGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFNMQCL*VHKGFW
Trigger: CCAAAAACCCTTATGGACCCACAAACACTGCATATT...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTGTTTGGGTGTTCAAGTaGCCGCAAGCAAACTCCGAT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFVWVFK*PQANSD
Trigger: ATCGGAGTTTGCTTGCGGCCACTTGAACACCCAAAC...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTACAGATGACGTAGTTTaGGTGTTCAAGTGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLTDDVV*VFKWPQ
Trigger: TTGCGGCCACTTGAACACCCAAACTACGTCATCTGT...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGT +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSVTGQA*VHNTNR
Trigger: ACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAAC...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGACGTGGATGTCCTGTaGCTAGACAAGTCAACTCAA +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFDVDVL*LDKSTQ
Trigger: TTGAGTTGACTTGTCTAGTCACAGGACATCCACGTC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp ATCTTCAGTAACTCATTCTTTAGGTTAGGCATCATCTTCTGTAGGCCTTCTATCGACGTGGATGTCCTGTaGCTAGACAAGTCAACTCAA +
Preference number: 4 (lower is better)
Translates to: IFSNSFFRLGIIFCRPSIDVDVL*LDKSTQ
Trigger: TTGAGTTGACTTGTCTAGTCACAGGACATCCACGTC...GATAGAAGGCCTACAGAAGATGATGCCTAACCTAAAGAATGAGTTACTGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTGACGTGGATGTCCTGTaGCTAGACAAGTCAACTCAA +
Preference number: 4 (lower is better)
Translates to: PSSSFIYDATVINPIVFIDVDVL*LDKSTQ
Trigger: TTGAGTTGACTTGTCTAGTCACAGGACATCCACGTC...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp CTGCCATACTGGATTGTAGGTATCATAATAGAATTCTGGAGCATAGGCCTTTCCCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPYWIVGIIIEFWSIGLSLIEDT*VLESVR
Trigger: TCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAG...GGAAAGGCCTATGCTCCAGAATTCTATTATGATACCTACAATCCAGTATGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAATACATCCACTCTGATTaGCTTTATCGCTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQYIHSD*LYRWRP
Trigger: GGGTCTCCAGCGATAAAGTCAATCAGAGTGGATGTA...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGTACATCCACTCTGATTaGCTTTATCGCTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLYIHSD*LYRWRP
Trigger: GGGTCTCCAGCGATAAAGTCAATCAGAGTGGATGTA...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCAGCATCATCTGAGGTaGTGGCAGGTATGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTQHHLR*WQVWSK
Trigger: CTTTGACCATACCTGCCATCACCTCAGATGATGCTG...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTATTCCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAGTACCAGCATCATCTaGGGTGATGGCAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: SIPLYCKQIGTSKVSFGLSTSII*GDGRYG
Trigger: ACCATACCTGCCATCACCTCAGATGATGCTGGTACT...CAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGGAATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp AGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAAACTATTTTGTATTGGCTGGTCTaGCATCTGTACATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SEVFVGRPLGFHGNKQTILYWLV*HLYIPD
Trigger: GTCAGGAATGTACAGATGTCAGACCAGCCAATACAA...AATAGTTTGCTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTGATCACACGAATTGTTaGATCTCCTTCACCAAATTT +
Preference number: 4 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRDHTNC*ISFTKF
Trigger: AAATTTGGTGAAGGAGATTCAACAATTCGTGTGATC...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCCTTTATTCCCACTTaGAGACCACAGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGESFIPT*RPQWIL
Trigger: GAGAATCCACTGTGGTCTTCAAGTGGGAATAAAGGA...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTCCTTTATTCCCACTTaGAGACCACAGTGGATTCTC +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLSFIPT*RPQWIL
Trigger: GAGAATCCACTGTGGTCTTCAAGTGGGAATAAAGGA...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTCACAACACAATACCCTaGCACACACTCACACGCACG +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSHNTIP*HTLTRT
Trigger: CGTGCGTGTGAGTGTGTGTCAGGGTATTGTGTTGTG...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR TCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTAGCCACAAAAGCACCTaGAGGTCTCTTCTCTACTCA +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFSHKST*RSLLYS
Trigger: TGAGTAGAGAAGAGACCTTCAGGTGCTTTTGTGGCT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GAAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAGCTATGCTGAAAGTAACCTAAGATTATaGGTGTCTGCCATCTGGTTG +
Preference number: 4 (lower is better)
Translates to: ETICSVCGSIRVFGSYAESNLRL*VSAIWL
Trigger: CAACCAGATGGCAGACACTCATAATCTTAGGTTACT...TTCAGCATAGCTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCCCCCAAGCCATTCTCTaGTTTACAGTAATACCGGCC +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLPQAIL*FTVIPA
Trigger: GGCCGGTATTACTGTAAAGCAGAGAATGGCTTGGGG...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCCCCAAGCCATTCTCTaGTTTACAGTAATACCGGCC +
Preference number: 4 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTPQAIL*FTVIPA
Trigger: GGCCGGTATTACTGTAAAGCAGAGAATGGCTTGGGG...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATGATGCCCAACCGGTATaGAACAATCCGATCCACTGC +
Preference number: 4 (lower is better)
Translates to: NPQSILAHDEYSINVNYYDAQPV*NNPIHC
Trigger: GCAGTGGATCGGATTGTTGCATACCGGTTGGGCATC...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTCGAGCAGGGCTCTCTTaGCTGGATTCGCCTTTACAA +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASRAGLS*LDSPLQ
Trigger: TTGTAAAGGCGAATCCAGGCAAGAGAGCCCTGCTCG...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR GCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTACTGTAGAGTTAGTATaGACTGCAATCCCAAACATT +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSTVELV*TAIPNI
Trigger: AATGTTTGGGATTGCAGTGCATACTAACTCTACAGT...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp ATCTTCAGTAACTCATTCTTTAGGTTAGGCATCATCTTCTGTAGGCCTTCTATCCACAAATTGAGGAGCTaGTCCTGTCTTCTATGTGCC +
Preference number: 4 (lower is better)
Translates to: IFSNSFFRLGIIFCRPSIHKLRS*SCLLCA
Trigger: GGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTG...GATAGAAGGCCTACAGAAGATGATGCCTAACCTAAAGAATGAGTTACTGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp AAACACACATACTGCTTGTCATACCTTACCTGGAAAGAGGCTTTATTGAACATAACCGAACAGGAGGATTaGAATTGGCAACACACCGGA +
Preference number: 4 (lower is better)
Translates to: KHTYCLSYLTWKEALLNITEQED*NWQHTG
Trigger: TCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGT...TATGTTCAATAAAGCCTCTTTCCAGGTAAGGTATGACAAGCAGTATGTGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp TATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATTTTGTGATAAGGATCTaGTGTGATCCAAAATCGTCC +
Preference number: 4 (lower is better)
Translates to: YFHWTPQIEELLLSSMCHFVIRI*CDPKSS
Trigger: GGACGATTTTGGATCACACCAGATCCTTATCACAAA...ATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGTGGAACAGTCAGATTaGGTGGAACTGTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASVEQSD*VELCCW
Trigger: CCAGCAGCACAGTTCCACCCAATCTGACTGTTCCAC...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCGGTCAGCACCCGTATTaGATAGGCTCTCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLGQHPY*IGSQYS
Trigger: AGAGTACTGAGAGCCTATCCAATACGGGTGCTGACC...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTGACTTCATCTGTTCTGCCATACTaGATTGTAGGTATCATAATA +
Preference number: 4 (lower is better)
Translates to: YYSDEVLQPSSCPGLLTSSVLPY*IVGIII
Trigger: TATTATGATACCTACAATCCAGTATGGCAGAACAGA...TGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATTTCGCCTTCCAATCTaGGTCGTGATGTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGEFRLPI*VVMSQC
Trigger: ACATTGAGACATCACGACCCAGATTGGAAGGCGAAA...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCCCTAAATATTCAAACTaGTCCCCTTTTGAACTGACT +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFPKYSN*SPFELT
Trigger: AGTCAGTTCAAAAGGGGACCAGTTTGAATATTTAGG...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTGTTTTGGTCCACCTGTaGACGTGGATGTCCTGTGAC +
Preference number: 4 (lower is better)
Translates to: CFDVAIVSLLIFEQGACIVLVHL*TWMSCD
Trigger: GTCACAGGACATCCACGTCCACAGGTGGACCAAAAC...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp TATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATAGAGCTTCCATTCTATaGAGAAACCACATCTATCTG +
Preference number: 4 (lower is better)
Translates to: YFHWTPQIEELLLSSMCHRASIL*RNHIYL
Trigger: CAGATAGATGTGGTTTCTCCATAGAATGGAAGCTCT...ATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGACTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGLIEDT*VLESVR
Trigger: TCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAG...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR TCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTAGTATACATCCACTCTaGTTGACTTTATCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLSIHPL*LTLSLE
Trigger: CTCCAGCGATAAAGTCAATCAGAGTGGATGTATACT...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTCAGCATCATCTGAGGTaGTGGCAGGTATGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASQHHLR*WQVWSK
Trigger: CTTTGACCATACCTGCCATCACCTCAGATGATGCTG...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTACCAGCATCATCTaGGGTGATGGCAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHASTSII*GDGRYG
Trigger: ACCATACCTGCCATCACCTCAGATGATGCTGGTACT...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAATCTGGTGACCAATGGTaGTTTTTCCTGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQSGDQW*FFLWNS
Trigger: ACTGTTCCACAGGAAAAATCACCATTGGTCACCAGA...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTATCTGGTGACCAATGGTaGTTTTTCCTGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLSGDQW*FFLWNS
Trigger: ACTGTTCCACAGGAAAAATCACCATTGGTCACCAGA...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GCATCTCCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCCAATCTGGGTCGTaGTGTCTCAATGTACATATA +
Preference number: 4 (lower is better)
Translates to: ASPSSSFIYDATVINPIVFQSGS*CLNVHI
Trigger: TATATGTACATTGAGACATCACGACCCAGATTGGAA...AACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGGAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCCATGCCAGTGCCTGGTaGATCTTTTATAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHAHASAW*IFYSLC
Trigger: GCAGAGGCTATAAAAGATTCACCAGGCACTGGCATG...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAGCCACAAAAGCACCTaGAGGTCTCTTCTCTACTCA +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTSHKST*RSLLYS
Trigger: TGAGTAGAGAAGAGACCTTCAGGTGCTTTTGTGGCT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAAACTATTCAGAGTTCAACCAGATaGCGCTGTAATCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: SEVFVGRPLGFHGNKQTIQSSTR*RCNLFS
Trigger: GCTAAAAAGATTACAGCGTCATCTGGTTGAACTCTG...AATAGTTTGCTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTGTACCCTGTTTACAGTaGGGTTTTTGTTGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSVPCLQ*GFCWQA
Trigger: GGCCTGCCAACAAAAACCTCACTGTAAACAGGGTAC...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATGTCAGAGGCACTTCCTaGTGTTTTGGTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: NPQSILAHDEYSINVNYYVRGTS*CFGPPD
Trigger: ATCAGGTGGACCAAAACAGCAGGAAGTGCCTCTGAC...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTCCTTTATCAGATCCTTaGAGCAAGACCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSPLSDP*SKTSWP
Trigger: TGGCCAGGAGGTCTTGCTGCAAGGATCTGATAAAGG...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTCCTTTATCAGATCCTTaGAGCAAGACCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASPLSDP*SKTSWP
Trigger: TGGCCAGGAGGTCTTGCTGCAAGGATCTGATAAAGG...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTCCTTTATCAGATCCTTaGAGCAAGACCTCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: CFDVAIVSLLIFEQGACIPLSDP*SKTSWP
Trigger: TGGCCAGGAGGTCTTGCTGCAAGGATCTGATAAAGG...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR GCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCTCCTCCCTTCAGAGATaGTACACATGTGTACGTCCC +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHASSLQR*YTCVRP
Trigger: GGGACGTACACATGTGTAGCATCTCTGAAGGGAGGA...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTTCCTCCCTTCAGAGATaGTACACATGTGTACGTCCC +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFSSLQR*YTCVRP
Trigger: GGGACGTACACATGTGTAGCATCTCTGAAGGGAGGA...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTGAATGCTGGTTCCACTaGAGGGGGATACTGAACGAT +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSECWFH*RGILND
Trigger: ATCGTTCAGTATCCCCCTGCAGTGGAACCAGCATTC...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACACTTCGATCCTGTCCTTaGCGGATTTCCAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTLRSCP*RISKNA
Trigger: AGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAG...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCCTTCGATCCTGTCCTTaGCGGATTTCCAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLLRSCP*RISKNA
Trigger: AGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAG...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAGAAGCTGAAACAATATaGAGTGTTTGTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPEAETI*SVCGSI
Trigger: TATGGACCCACAAACACTGCATATTGTTTCAGCTTC...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTATCCATCAGTTGCCATTaGAACGCCAATCCTGTTACA +
Preference number: 4 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLSISCH*NANPVT
Trigger: TGTAACAGGATTGGCGTTGCAATGGCAACTGATGGA...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR GCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTCGTAAGGAAAATAAATaGCAGCTCTTCACGTACCCT +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLRKENK*QLFTYP
Trigger: AGGGTACGTGAAGAGCTGGCATTTATTTTCCTTACG...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTAACAAATATCTTGTCTaGATGGGCTTACGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFNKYLV*MGLRSS
Trigger: GCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTAGAGTTAGTATGCACTaGAATCCCAAACATTTTCTT +
Preference number: 4 (lower is better)
Translates to: TTNILSAWAYAAASVLSSRVSMH*NPKHFL
Trigger: AAGAAAATGTTTGGGATTGCAGTGCATACTAACTCT...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCATTTGTGATAAGGATCTaGTGTGATCCAAAATCGTCC +
Preference number: 4 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPFVIRI*CDPKSS
Trigger: GGACGATTTTGGATCACACCAGATCCTTATCACAAA...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCAACAGTCAGATTGGGTaGAACTGTGCTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASANSQIG*NCAAGY
Trigger: ATATCCAGCAGCACAGTTCCACCCAATCTGACTGTT...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAAAACAGTCAGATTGGGTaGAACTGTGCTGCTGGATAT +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQNSQIG*NCAAGY
Trigger: ATATCCAGCAGCACAGTTCCACCCAATCTGACTGTT...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAACACCAAGGCTTCCCTTaGTTTCACGTTAAATCCATT +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGEHQGFP*FHVKSI
Trigger: AATGGATTTAACGTGAAACCAAGGGAAGCCTTGGTG...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGACACCAAGGCTTCCCTTaGTTTCACGTTAAATCCATT +
Preference number: 4 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGHQGFP*FHVKSI
Trigger: AATGGATTTAACGTGAAACCAAGGGAAGCCTTGGTG...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAGATTTCCAAGAATGCTaGTTCCACTGCAGGGGGATA +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTDFQEC*FHCRGI
Trigger: TATCCCCCTGCAGTGGAACCAGCATTCTTGGAAATC...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTGGTCAGCACCCGTATTaGATAGGCTCTCAGTACTCT +
Preference number: 4 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLGQHPY*IGSQYS
Trigger: AGAGTACTGAGAGCCTATCCAATACGGGTGCTGACC...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTTTTCGCCTTCCAATCTaGGTCGTGATGTCTCAATGT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFFRLPI*VVMSQC
Trigger: ACATTGAGACATCACGACCCAGATTGGAAGGCGAAA...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GCATCTCCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTAATATGCAGTGTTTGTaGGTCCATAAGGGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: ASPSSSFIYDATVINPIVNMQCL*VHKGFW
Trigger: CCAAAAACCCTTATGGACCCACAAACACTGCATATT...AACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGGAGATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAACAGATGACGTAGTTTaGGTGTTCAAGTGGCCGCAA +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTTDDVV*VFKWPQ
Trigger: TTGCGGCCACTTGAACACCCAAACTACGTCATCTGT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCAATAACCTTTTGCTCTaGTTGACCCATTTAATAACC +
Preference number: 4 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFNNLLL*LTHLIT
Trigger: GGTTATTAAATGGGTCAACCAGAGCAAAAGGTTATT...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp ACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATGTATTGTATCAAAGGTCAGTTTTaGCTTGAAGACAGAATATGT +
Preference number: 4 (lower is better)
Translates to: TGHHKLRSCSCLLCAMYCIKGQF*LEDRIC
Trigger: ACATATTCTGTCTTCAAGCCAAAACTGACCTTTGAT...ACAATACATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCGACGTGGATGTCCTGTaGCTAGACAAGTCAACTCAA +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHADVDVL*LDKSTQ
Trigger: TTGAGTTGACTTGTCTAGTCACAGGACATCCACGTC...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFLIEDT*VLESVR
Trigger: TCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAG...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTTCCTCAAAGTCTCATTaGAGACACTTGAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFSSKSH*RHLSLG
Trigger: TCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGA...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGTCCTCAAAGTCTCATTaGAGACACTTGAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLSSKSH*RHLSLG
Trigger: TCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGA...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTCCTCCTTGGTGTCGCTaGATATTTGTAATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFPPWCR*IFVILK
Trigger: TTTGAGGATTACAAATATTCAGCGACACCAAGGAGG...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCTACATCCACTCTGATTaGCTTTATCGCTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHAYIHSD*LYRWRP
Trigger: GGGTCTCCAGCGATAAAGTCAATCAGAGTGGATGTA...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGAGTATACATCCACTCTaGTTGACTTTATCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLSIHPL*LTLSLE
Trigger: CTCCAGCGATAAAGTCAATCAGAGTGGATGTATACT...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAAGACAAGTATACATCCACTCTaGTTGACTTTATCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PLYCKQIGTSKVSFGLKTSIHPL*LTLSLE
Trigger: CTCCAGCGATAAAGTCAATCAGAGTGGATGTATACT...TGTCTTCAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAACATACATTCCTCACTaGAGCAATGCAGCTATAATT +
Preference number: 4 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPTYIPH*SNAAII
Trigger: AATTATAGCTGCATTGCTTCAGTGAGGAATGTATGT...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AAAATCTTCCAACAAGTGTTCCTGCACAGTAATAAAACAGGCAGACTCTGTCCAGATAAGGATCTGGTGTaGTCCAAAATCGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: KIFQQVFLHSNKTGRLCPDKDLV*SKIVLF
Trigger: AAAAAGGACGATTTTGGATCACACCAGATCCTTATC...TGGACAGAGTCTGCCTGTTTTATTACTGTGCAGGAACACTTGTTGGAAGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACATGTCTCCTTCTCTGGTaGCCAATGGTGATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTCLLLW*PMVIFP
Trigger: AGGAAAAATCACCATTGGTCACCAGAGAAGGAGACA...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTGTCTCCTTCTCTGGTaGCCAATGGTGATTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLCLLLW*PMVIFP
Trigger: AGGAAAAATCACCATTGGTCACCAGAGAAGGAGACA...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAACATCTGTACATTCCTaGCATTTCCCTAGATACATT +
Preference number: 4 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPTSVHS*HFPRYI
Trigger: AATGTATCTAGGGAAATGTCAGGAATGTACAGATGT...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTGTATTGGCTGGTCTaGCATCTGTACATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLLYWLV*HLYIPD
Trigger: GTCAGGAATGTACAGATGTCAGACCAGCCAATACAA...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTTTGTATTGGCTGGTCTaGCATCTGTACATTCCTGAC +
Preference number: 4 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTLYWLV*HLYIPD
Trigger: GTCAGGAATGTACAGATGTCAGACCAGCCAATACAA...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCACCAAATTTGGTaGGAGGAGTCAGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFLHQIW*EESVGL
Trigger: AAGTCCGACTGACTCCTCTCACCAAATTTGGTGAAG...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTCTTCACCAAATTTGGTaGGAGGAGTCAGTCGGACTT +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSLHQIW*EESVGL
Trigger: AAGTCCGACTGACTCCTCTCACCAAATTTGGTGAAG...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCCTTCATTGGAACAGATaGCGTAGTTTGGGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASALHWNR*RSLGVQ
Trigger: TTGAACACCCAAACTACGTCATCTGTTCCAATGAAG...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTTTATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATTATTATTGGCAATaGAGCTGTAAGTACCAGCAT +
Preference number: 4 (lower is better)
Translates to: FYFHWTPQIEELLLSSMCHYYWQ*SCKYQH
Trigger: ATGCTGGTACTTACAGCTGCATTGCCAATAATAATG...GCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR GCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTCTTCGATCCTGTCCTTaGCGGATTTCCAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSLRSCP*RISKNA
Trigger: AGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAG...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATCTTCGATCCTGTCCTTaGCGGATTTCCAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: NPQSILAHDEYSINVNYYLRSCP*RISKNA
Trigger: AGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAG...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTTCCGTAATAATTTATTaGCCAAGCGCCACTCATAGG +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFSVIIY*PSATHR
Trigger: CCTATGAGTGGCGCTTGGGCAATAAATTATTACGGA...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTAACAATCCGATCCACTaGATCAGGATTCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: PSSSFIYDATVINPIVFINNPIH*IRIHLC
Trigger: ACACAGATGAATCCTGATGCAGTGGATCGGATTGTT...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR GCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTAAGACTCTTTCTTCATaGCAGTGCCTGGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFKTLSS*QCLVNL
Trigger: AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAAGACACTCCTGTCTTCTATGTaGCATGTATTGTTTCGGCTA +
Preference number: 4 (lower is better)
Translates to: PLYCKQIGTSKVSFGLKTLLSSM*HVLFRL
Trigger: TAGCCGAAACAATACATGGCACATAGAAGACAGGAG...TGTCTTCAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTTGTGATAAGGATCTaGTGTGATCCAAAATCGTCC +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLFVIRI*CDPKSS
Trigger: GGACGATTTTGGATCACACCAGATCCTTATCACAAA...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAAGACCAAAGGATGATTaGTTTAGGTTTGCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGERPKDD*FRFASY
Trigger: GTAACTGGCAAACCTAAACCAATCATCCTTTGGTCT...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAAACTATTAGACCAAAGGATGATTaGTTTAGGTTTGCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SEVFVGRPLGFHGNKQTIRPKDD*FRFASY
Trigger: GTAACTGGCAAACCTAAACCAATCATCCTTTGGTCT...AATAGTTTGCTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCGATTTCCAAGAATGCTaGTTCCACTGCAGGGGGATA +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHADFQEC*FHCRGI
Trigger: TATCCCCCTGCAGTGGAACCAGCATTCTTGGAAATC...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGATTTCCAAGAATGCTaGTTCCACTGCAGGGGGATA +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASDFQEC*FHCRGI
Trigger: TATCCCCCTGCAGTGGAACCAGCATTCTTGGAAATC...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTATAAAAACCTTCTTTaGAGCCACTACGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLYKNLL*SHYGQH
Trigger: ATGCTGACCGTAGTGGCTCCAAAGAAGGTTTTTATA...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTCCAGGTTTACCATCCTaGATAGTAGTGCATGCAAAA +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFPGLPS*IVVHAK
Trigger: TTTTGCATGCACTACTATCCAGGATGGTAAACCTGG...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTAATATCTTGTCTGCATaGGCTTACGCAGCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFNILSA*AYAAAS
Trigger: CGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATT...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TTTTATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCCAGGGGTAGTGTTTTaGAAGAAGTCAATATATTTC +
Preference number: 4 (lower is better)
Translates to: FYFHWTPQIEELLLSSMCPGVVF*KKSIYF
Trigger: GAAATATATTGACTTCTTCCAAAACACTACCCCTGG...GCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATTTTGAGAGGCGAAGGTaGGAAGATTCCTTGAGACCA +
Preference number: 4 (lower is better)
Translates to: NPQSILAHDEYSINVNYYFERRR*EDSLRP
Trigger: TGGTCTCAAGGAATCTTCCCACCTTCGCCTCTCAAA...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTTTCTCAAAAGCTTTCTaGCTGGGCACAATGACTCAT +
Preference number: 4 (lower is better)
Translates to: PSSSFIYDATVINPIVFIFSKAF*LGTMTH
Trigger: ATGAGTCATTGTGCCCAGCCAGAAAGCTTTTGAGAA...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAAGATAAGGATCTGGTGTaGTCCAAAATCGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQDKDLV*SKIVLF
Trigger: AAAAAGGACGATTTTGGATCACACCAGATCCTTATC...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGATAAGGATCTGGTGTaGTCCAAAATCGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLDKDLV*SKIVLF
Trigger: AAAAAGGACGATTTTGGATCACACCAGATCCTTATC...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTTCTGGTGACCAATGGTaGTTTTTCCTGTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFSGDQW*FFLWNS
Trigger: ACTGTTCCACAGGAAAAATCACCATTGGTCACCAGA...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTTCCAATCTGGGTCGTaGTGTCTCAATGTACATATA +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASAFQSGS*CLNVHI
Trigger: TATATGTACATTGAGACATCACGACCCAGATTGGAA...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGGAAAAAGCCATATATaGACCAAAATCCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLGKSHI*TKIPTA
Trigger: TGCTGTTGGGATTTTGGTTCATATATGGCTTTTTCC...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTAGGAAAAAGCCATATATaGACCAAAATCCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLGKSHI*TKIPTA
Trigger: TGCTGTTGGGATTTTGGTTCATATATGGCTTTTTCC...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCAGCAGTGCAAGCTTCTaGGTTGAAAATTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLSSASF*VENYSG
Trigger: GCCTGAATAATTTTCAACTCAGAAGCTTGCACTGCT...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTTTTATTTTAATCTCCTaGTCCCACCAGCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASFILIS*SHQRCC
Trigger: ACAGCAGCGCTGGTGGGAGCAGGAGATTAAAATAAA...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGAAGCTGAAACAATATaGAGTGTTTGTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLEAETI*SVCGSI
Trigger: TATGGACCCACAAACACTGCATATTGTTTCAGCTTC...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGAAGCTGAAACAATATaGAGTGTTTGTGGGTCCATA +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFEAETI*SVCGSI
Trigger: TATGGACCCACAAACACTGCATATTGTTTCAGCTTC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCATCTTTTATAGCCTCTaGCAGGATAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLIFYSL*QDKVTF
Trigger: GAAGGTGACCTTATCCTGGCAGAGGCTATAAAAGAT...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCAAGACTCTTTCTTCATaGCAGTGCCTGGTGAATCTT +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLKTLSS*QCLVNL
Trigger: AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTT...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAACTGGATAGTAGTGCATaGAAAAAGAGACAGCATACA +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQLDSSA*KKRQHT
Trigger: TGTATGCTGTCTCTTTTTGCATGCACTACTATCCAG...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTCTTGCCTGTAATTTaGACATTTAGGCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLVLPVI*TFRLCS
Trigger: ACTACAGAGCCTAAATGTGCAAATTACAGGCAAGAC...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTAACAAATATCTTGTCTaGATGGGCTTACGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASNKYLV*MGLRSS
Trigger: GCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAACTGTAGAGTTAGTATaGACTGCAATCCCAAACATT +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGETVELV*TAIPNI
Trigger: AATGTTTGGGATTGCAGTGCATACTAACTCTACAGT...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACACTTGAGTCTTaGAATCTGTCAGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTKTLES*NLSEAL
Trigger: AAGTGCCTCTGACAGATTCCAAGACTCAAGTGTCTT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTACCCTGGGTAAAGAATaGTTCATAAATCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFTLGKE*FINLNS
Trigger: GGAGTTGAGATTTATGAACCATTCTTTACCCAGGGT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAAGACAACCCTGGGTAAAGAATaGTTCATAAATCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: PLYCKQIGTSKVSFGLKTTLGKE*FINLNS
Trigger: GGAGTTGAGATTTATGAACCATTCTTTACCCAGGGT...TGTCTTCAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGACACATACTAATGTTATaGCCTCTCCAGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGHILML*PLQDLQ
Trigger: TTGTAAATCCTGGAGAGGCCATAACATTAGTATGTG...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASAGTAST*QDIFTS
Trigger: TGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCC...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTATCCATTGTATTGGCTaGTCTGACATCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFIHCIG*SDICTF
Trigger: GAATGTACAGATGTCAGACCAGCCAATACAATGGAT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTTATAAAAACCTTCTTTaGAGCCACTACGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFYKNLL*SHYGQH
Trigger: ATGCTGACCGTAGTGGCTCCAAAGAAGGTTTTTATA...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTAATATGCAGTGTTTGTaGGTCCATAAGGGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFNMQCL*VHKGFW
Trigger: CCAAAAACCCTTATGGACCCACAAACACTGCATATT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AATGCCCCAGATATTGTGTACTTGAATCTCTTTGGTCTGATAAAGTATATGGGTCCAGGTTTACCATCCTaGATAGTAGTGCATGCAAAA +
Preference number: 4 (lower is better)
Translates to: NAPDIVYLNLFGLIKYMGPGLPS*IVVHAK
Trigger: TTTTGCATGCACTACTATCCAGGATGGTAAACCTGG...ACCCATATACTTTATCAGACCAAAGAGATTCAAGTACACAATATCTGGGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAGGCACTTGGTTTCCATaGCAATTTATAAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGEGTWFP*QFIKDG
Trigger: ACCATCTTTTATAAATTGCCATGGAAACCAAGTGCC...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
3UTR CAA 72 bp TTACACAAACCACTCTTAGCAGTGCAAGCTTCTGAGTaGAAAATTATTCAGGCTTGTTTCATTGAAGGCACT +
Preference number: 4 (lower is better)
Translates to: LHKPLLAVQASE*KIIQACFIEGT
Trigger: AGTGCCTTCAATGAAACAAGCCTGAATAATTTTCAACTCAGAAGCTTGCACTGCTAAGAGTGGTTTGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCCTCAAAGTCTCATTaGAGACACTTGAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSSSKSH*RHLSLG
Trigger: TCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGA...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTCCTCCTTGGTGTCGCTaGATATTTGTAATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLPPWCR*IFVILK
Trigger: TTTGAGGATTACAAATATTCAGCGACACCAAGGAGG...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTCCTCCTTGGTGTCGCTaGATATTTGTAATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: CFDVAIVSLLIFEQGACIPPWCR*IFVILK
Trigger: TTTGAGGATTACAAATATTCAGCGACACCAAGGAGG...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATAGTATACATCCACTCTaGTTGACTTTATCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NPQSILAHDEYSINVNYYSIHPL*LTLSLE
Trigger: CTCCAGCGATAAAGTCAATCAGAGTGGATGTATACT...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTACATACATTCCTCACTaGAGCAATGCAGCTATAATT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFTYIPH*SNAAII
Trigger: AATTATAGCTGCATTGCTTCAGTGAGGAATGTATGT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp CCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAAGACAACATACATTCCTCACTaGAGCAATGCAGCTATAATT +
Preference number: 4 (lower is better)
Translates to: PLYCKQIGTSKVSFGLKTTYIPH*SNAAII
Trigger: AATTATAGCTGCATTGCTTCAGTGAGGAATGTATGT...TGTCTTCAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCGATAAGGATCTGGTGTaGTCCAAAATCGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLDKDLV*SKIVLF
Trigger: AAAAAGGACGATTTTGGATCACACCAGATCCTTATC...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCACATCTGTACATTCCTaGCATTTCCCTAGATACATT +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASATSVHS*HFPRYI
Trigger: AATGTATCTAGGGAAATGTCAGGAATGTACAGATGT...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGATCACACGAATTGTTaGATCTCCTTCACCAAATTT +
Preference number: 4 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFDHTNC*ISFTKF
Trigger: AAATTTGGTGAAGGAGATTCAACAATTCGTGTGATC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTGATCACACGAATTGTTaGATCTCCTTCACCAAATTT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFDHTNC*ISFTKF
Trigger: AAATTTGGTGAAGGAGATTCAACAATTCGTGTGATC...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTCAGGAGCACTATATTTaGTCACACGAATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFQEHYI*SHELLN
Trigger: ATTCAACAATTCGTGTGATCAAATATAGTGCTCCTG...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTCCAATCTGGGTCGTaGTGTCTCAATGTACATATA +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLFQSGS*CLNVHI
Trigger: TATATGTACATTGAGACATCACGACCCAGATTGGAA...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAGGAAAAAGCCATATATaGACCAAAATCCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTGKSHI*TKIPTA
Trigger: TGCTGTTGGGATTTTGGTTCATATATGGCTTTTTCC...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCAGCAAACTATTCATTTaGAACAAAACCAGCCATGAC +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASASKLFI*NKTSHD
Trigger: GTCATGGCTGGTTTTGTTTCAAATGAATAGTTTGCT...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTAGCAGTGCAAGCTTCTaGGTTGAAAATTATTCAGGC +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASSSASF*VENYSG
Trigger: GCCTGAATAATTTTCAACTCAGAAGCTTGCACTGCT...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTCATTATTATTGGCAATaGAGCTGTAAGTACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFHYYWQ*SCKYQH
Trigger: ATGCTGGTACTTACAGCTGCATTGCCAATAATAATG...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGCATTATTATTGGCAATaGAGCTGTAAGTACCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLHYYWQ*SCKYQH
Trigger: ATGCTGGTACTTACAGCTGCATTGCCAATAATAATG...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTACATTATTATTGGCAATaGAGCTGTAAGTACCAGCAT +
Preference number: 4 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLHYYWQ*SCKYQH
Trigger: ATGCTGGTACTTACAGCTGCATTGCCAATAATAATG...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTTCCGTAATAATTTATTaGCCAAGCGCCACTCATAGG +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFSVIIY*PSATHR
Trigger: CCTATGAGTGGCGCTTGGGCAATAAATTATTACGGA...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAACAATCCGATCCACTaGATCAGGATTCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHANNPIH*IRIHLC
Trigger: ACACAGATGAATCCTGATGCAGTGGATCGGATTGTT...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCATCTTTTATAGCCTCTaGCAGGATAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHAIFYSL*QDKVTF
Trigger: GAAGGTGACCTTATCCTGGCAGAGGCTATAAAAGAT...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTATCTTTTATAGCCTCTaGCAGGATAAGGTCACCTTC +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFIFYSL*QDKVTF
Trigger: GAAGGTGACCTTATCCTGGCAGAGGCTATAAAAGAT...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AAACACACATACTGCTTGTCATACCTTACCTGGAAAGAGGCTTTATTGAACATACCAGCCATGACTTTGTaGTTTGACAAGGATTTCTAT +
Preference number: 4 (lower is better)
Translates to: KHTYCLSYLTWKEALLNIPAMTL*FDKDFY
Trigger: ATAGAAATCCTTGTCAAAGCACAAAGTCATGGCTGG...TATGTTCAATAAAGCCTCTTTCCAGGTAAGGTATGACAAGCAGTATGTGTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR GCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCGTAAGGAAAATAAATaGCAGCTCTTCACGTACCCT +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFRKENK*QLFTYP
Trigger: AGGGTACGTGAAGAGCTGGCATTTATTTTCCTTACG...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AAACACACATACTGCTTGTCATACCTTACCTGGAAAGAGGCTTTATTGAACATACTGGATAGTAGTGCATaGAAAAAGAGACAGCATACA +
Preference number: 4 (lower is better)
Translates to: KHTYCLSYLTWKEALLNILDSSA*KKRQHT
Trigger: TGTATGCTGTCTCTTTTTGCATGCACTACTATCCAG...TATGTTCAATAAAGCCTCTTTCCAGGTAAGGTATGACAAGCAGTATGTGTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR GCA 90 bp AGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAAACTATTAGAGTTAGTATGCACTaGAATCCCAAACATTTTCTT +
Preference number: 4 (lower is better)
Translates to: SEVFVGRPLGFHGNKQTIRVSMH*NPKHFL
Trigger: AAGAAAATGTTTGGGATTGCAGTGCATACTAACTCT...AATAGTTTGCTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAACAAACACACATACTaGTTGTCATACCTTACCTGG +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTNKHTY*LSYLTW
Trigger: CCAGGTAAGGTATGACAAGCAGTATGTGTGTTTGTT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR GCA 90 bp AATGCCCCAGATATTGTGTACTTGAATCTCTTTGGTCTGATAAAGTATATGGGTTACAATATAGGGGAGTaGATCAGGGAGTTCCTATTA +
Preference number: 4 (lower is better)
Translates to: NAPDIVYLNLFGLIKYMGYNIGE*IREFLL
Trigger: TAATAGGAACTCCCTGATGCACTCCCCTATATTGTA...ACCCATATACTTTATCAGACCAAAGAGATTCAAGTACACAATATCTGGGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGCACATACTAATGTTATaGCCTCTCCAGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLHILML*PLQDLQ
Trigger: TTGTAAATCCTGGAGAGGCCATAACATTAGTATGTG...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp ATCTTCAGTAACTCATTCTTTAGGTTAGGCATCATCTTCTGTAGGCCTTCTATCCACATACTAATGTTATaGCCTCTCCAGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: IFSNSFFRLGIIFCRPSIHILML*PLQDLQ
Trigger: TTGTAAATCCTGGAGAGGCCATAACATTAGTATGTG...GATAGAAGGCCTACAGAAGATGATGCCTAACCTAAAGAATGAGTTACTGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTGTAST*QDIFTS
Trigger: TGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCC...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTGTAST*QDIFTS
Trigger: TGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCC...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AATGCCCCAGATATTGTGTACTTGAATCTCTTTGGTCTGATAAAGTATATGGGTATCCATTGTATTGGCTaGTCTGACATCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: NAPDIVYLNLFGLIKYMGIHCIG*SDICTF
Trigger: GAATGTACAGATGTCAGACCAGCCAATACAATGGAT...ACCCATATACTTTATCAGACCAAAGAGATTCAAGTACACAATATCTGGGGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp AGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAAACTATTTCTGTTCTGCCATACTaGATTGTAGGTATCATAATA +
Preference number: 4 (lower is better)
Translates to: SEVFVGRPLGFHGNKQTISVLPY*IVGIII
Trigger: TATTATGATACCTACAATCCAGTATGGCAGAACAGA...AATAGTTTGCTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGATTCATTGAAGGCACTTaGTTTCCATGGCAATTTATA +
Preference number: 4 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGFIEGT*FPWQFI
Trigger: TATAAATTGCCATGGAAACCAAGTGCCTTCAATGAA...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CCA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTCTATCTGTAGTTAAGTaGGTACTTTCCAGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: CFDVAIVSLLIFEQGACILSVVK*VLSRGS
Trigger: ACTACCCCTGGAAAGTACCCACTTAACTACAGATAG...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCACATACATTCCTCACTaGAGCAATGCAGCTATAATT +
Preference number: 4 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLTYIPH*SNAAII
Trigger: AATTATAGCTGCATTGCTTCAGTGAGGAATGTATGT...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTGATAAGGATCTGGTGTaGTCCAAAATCGTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: CFDVAIVSLLIFEQGACIDKDLV*SKIVLF
Trigger: AAAAAGGACGATTTTGGATCACACCAGATCCTTATC...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAACATCTGTACATTCCTaGCATTTCCCTAGATACATT +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTTSVHS*HFPRYI
Trigger: AATGTATCTAGGGAAATGTCAGGAATGTACAGATGT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTTCCAATCTGGGTCGTaGTGTCTCAATGTACATATA +
Preference number: 4 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLFQSGS*CLNVHI
Trigger: TATATGTACATTGAGACATCACGACCCAGATTGGAA...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCCTTGTTGCTGTACTTTaGTTTGTCCAGTCAAAATTA +
Preference number: 4 (lower is better)
Translates to: VVCLFNVHLQRLFLHASALVAVL*FVQSKL
Trigger: TAATTTTGACTGGACAAAGCAAAGTACAGCAACAAG...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTCCAGCCATGACTTTGTaGTTTGACAAGGATTTCTAT +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASPAMTL*FDKDFY
Trigger: ATAGAAATCCTTGTCAAAGCACAAAGTCATGGCTGG...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTGTCTTGCCTGTAATTTaGACATTTAGGCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFVLPVI*TFRLCS
Trigger: ACTACAGAGCCTAAATGTGCAAATTACAGGCAAGAC...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTACCCTGGGTAAAGAATaGTTCATAAATCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASTLGKE*FINLNS
Trigger: GGAGTTGAGATTTATGAACCATTCTTTACCCAGGGT...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTACCCTGGGTAAAGAATaGTTCATAAATCTCAACTCC +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFTLGKE*FINLNS
Trigger: GGAGTTGAGATTTATGAACCATTCTTTACCCAGGGT...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTTTTGTGATAAGGATCTaGTGTGATCCAAAATCGTCC +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASFVIRI*CDPKSS
Trigger: GGACGATTTTGGATCACACCAGATCCTTATCACAAA...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCA +
Preference number: 4 (lower is better)
Translates to: CFDVAIVSLLIFEQGACIGTAST*QDIFTS
Trigger: TGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCC...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTAGACCAAAGGATGATTaGTTTAGGTTTGCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASRPKDD*FRFASY
Trigger: GTAACTGGCAAACCTAAACCAATCATCCTTTGGTCT...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCATCCATTGTATTGGCTaGTCTGACATCTGTACATTC +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHAIHCIG*SDICTF
Trigger: GAATGTACAGATGTCAGACCAGCCAATACAATGGAT...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTATCTGTTCTGCCATACTaGATTGTAGGTATCATAATA +
Preference number: 4 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLSVLPY*IVGIII
Trigger: TATTATGATACCTACAATCCAGTATGGCAGAACAGA...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAATCTGTTCTGCCATACTaGATTGTAGGTATCATAATA +
Preference number: 4 (lower is better)
Translates to: NALENWLVKDMICRQVAQSVLPY*IVGIII
Trigger: TATTATGATACCTACAATCCAGTATGGCAGAACAGA...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTATAAAAACCTTCTTTaGAGCCACTACGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSYKNLL*SHYGQH
Trigger: ATGCTGACCGTAGTGGCTCCAAAGAAGGTTTTTATA...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTAATATGCAGTGTTTGTaGGTCCATAAGGGTTTTTGG +
Preference number: 4 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLNMQCL*VHKGFW
Trigger: CCAAAAACCCTTATGGACCCACAAACACTGCATATT...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp CCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAAGACACATTTTTATTTTCACTaGACACCACAAATTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PLYCKQIGTSKVSFGLKTHFYFH*TPQIEE
Trigger: CTCCTCAATTTGTGGTGTCCAGTGAAAATAAAAATG...TGTCTTCAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR TCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATACATCTGTACATTCCTaGCATTTCCCTAGATACATT +
Preference number: 4 (lower is better)
Translates to: NPQSILAHDEYSINVNYYTSVHS*HFPRYI
Trigger: AATGTATCTAGGGAAATGTCAGGAATGTACAGATGT...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR TCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCAGGAGCACTATATTTaGTCACACGAATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFQEHYI*SHELLN
Trigger: ATTCAACAATTCGTGTGATCAAATATAGTGCTCCTG...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTCAGGAGCACTATATTTaGTCACACGAATTGTTGAAT +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASQEHYI*SHELLN
Trigger: ATTCAACAATTCGTGTGATCAAATATAGTGCTCCTG...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR TCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTAGCAAACTATTCATTTaGAACAAAACCAGCCATGAC +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASSKLFI*NKTSHD
Trigger: GTCATGGCTGGTTTTGTTTCAAATGAATAGTTTGCT...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTCACATACTAATGTTATaGCCTCTCCAGGATTTACAA +
Preference number: 4 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLHILML*PLQDLQ
Trigger: TTGTAAATCCTGGAGAGGCCATAACATTAGTATGTG...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCGGCACTTGGTTTCCATaGCAATTTATAAAAGATGGT +
Preference number: 4 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHAGTWFP*QFIKDG
Trigger: ACCATCTTTTATAAATTGCCATGGAAACCAAGTGCC...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTTTCATTGAAGGCACTTaGTTTCCATGGCAATTTATA +
Preference number: 4 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTFIEGT*FPWQFI
Trigger: TATAAATTGCCATGGAAACCAAGTGCCTTCAATGAA...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAATAACCTTTTGCTCTaGTTGACCCATTTAATAACC +
Preference number: 4 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTNNLLL*LTHLIT
Trigger: GGTTATTAAATGGGTCAACCAGAGCAAAAGGTTATT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CCA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTTGTCATACCTTACCTaGAAAGAGGCTTTATTGAAC +
Preference number: 4 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLLSYLT*KEALLN
Trigger: GTTCAATAAAGCCTCTTTCCAGGTAAGGTATGACAA...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
3UTR CAA 72 bp TTTGAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTaGTTTGTTCAATGTCCATTTACAAAGACTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FESVVSGGIFGS*FVQCPFTKTLS
Trigger: AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
3UTR CAA 72 bp TTACCACCTTCTGCACTAAGTATTCTTAATAACCTTTaGCTCTGGTTGACCCATTTAATAACCTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: LPPSALSILNNL*LWLTHLITWKK
Trigger: TTTCTTCCAGGTTATTAAATGGGTCAACCAGAGCAAAAGGTTATTAAGAATACTTAGTGCAGAAGGTGGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTCTTGTTGCTGTACTTTaGTTTGTCCAGTCAAAATTA +
Preference number: 4 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSLVAVL*FVQSKL
Trigger: TAATTTTGACTGGACAAAGCAAAGTACAGCAACAAG...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTGTTGCTGTACTTTaGTTTGTCCAGTCAAAATTA +
Preference number: 4 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFLVAVL*FVQSKL
Trigger: TAATTTTGACTGGACAAAGCAAAGTACAGCAACAAG...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR GCA 90 bp AATCCACAAAGTATCCTAGCCCATGATGAGTACTCCATAAATGTCAACTATTATCTTGTTGCTGTACTTTaGTTTGTCCAGTCAAAATTA +
Preference number: 4 (lower is better)
Translates to: NPQSILAHDEYSINVNYYLVAVL*FVQSKL
Trigger: TAATTTTGACTGGACAAAGCAAAGTACAGCAACAAG...ATAATAGTTGACATTTATGGAGTACTCATCATGGGCTAGGATACTTTGTGGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CCA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGTACTTGAATCTCTTTaGTCTGATAAAGTATATGGG +
Preference number: 4 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASVLESL*SDKVYG
Trigger: CCCATATACTTTATCAGACCAAAGAGATTCAAGTAC...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS GCA 90 bp CGAGGCGAAGTGTTCTTCAGGGAAGCGGGCTCGAGTCTCCGCAGCTaGGGCGGCGGCGGCGGCGCGCTGGGCCGGCGGCGGGCGCGGGCA +
Preference number: 5 (lower is better)
Translates to: RGEVFFREAGSSLRS*GGGGGALGRRRARA
Trigger: TGCCCGCGCCCGCCGCCGGCCCAGCGCGCCGCCGCCGCCGCCGCAGCTGCGGAGACTCGAGCCCGCTTCCCTGAAGAACACTTCGCCTCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS GCA 90 bp GCGGCCAGCCAGGCGCGCTCCACTCGCGCCCGGGCCAAGCCGAGGTaGCCGGGAACCGCTCGCCGAAGGAGGAAGCGCCGTCCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: AASQARSTRARAKPR*PGTARRRRKRRPSV
Trigger: GACAGACGGACGGCGCTTCCTCCTTCGGCGAGCGGTTCCCGGGCACCTCGGCTTGGCCCGGGCGCGAGTGGAGCGCGCCTGGCTGGCCGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS CCA 90 bp AGCCCTCCTTCGCTCTCGGCGCCTCCTCGGCTTTGGCACTCACTCTaGCCGCGCTTGAGGAGCCCTTCAGCCCGCCGCTGCACTGTGGGA +
Preference number: 5 (lower is better)
Translates to: SPPSLSAPPRLWHSL*PRLRSPSARRCTVG
Trigger: TCCCACAGTGCAGCGGCGGGCTGAAGGGCTCCTCAAGCGCGGCCAGAGTGAGTGCCAAAGCCGAGGAGGCGCCGAGAGCGAAGGAGGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS CCA 90 bp TGCCGCGCGGTAGGAGCCTGGCTTGGACAGCCGAGGAGCAGGAAGTaGCCTCTGACCCAGGACACCGAGCAGGGCTCTCTTGCCTGGATT +
Preference number: 5 (lower is better)
Translates to: CRAVGAWLGQPRSRK*PLTQDTEQGSLAWI
Trigger: AATCCAGGCAAGAGAGCCCTGCTCGGTGTCCTGGGTCAGAGGCCACTTCCTGCTCCTCGGCTGTCCAAGCCAGGCTCCTACCGCGCGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS CCA 90 bp AGGAAGTGGCCTCTGACCCAGGACACCGAGCAGGGCTCTCTTGCCTaGATTCGCCTTTACAAAGTAACTCGCGAAGGTCCCCGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: RKWPLTQDTEQGSLA*IRLYKVTREGPRRG
Trigger: GCCCCTCCGGGGACCTTCGCGAGTTACTTTGTAAAGGCGAATCCAGGCAAGAGAGCCCTGCTCGGTGTCCTGGGTCAGAGGCCACTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CAA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGGCGCCTCCTCGGCTTaGGCACTCACTCTGGCCGCG +
Preference number: 5 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGGASSA*ALTLAA
Trigger: CGCGGCCAGAGTGAGTGCCAAAGCCGAGGAGGCGCC...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS GCA 90 bp GAGCAGGAAGTGGCCTCTGACCCAGGACACCGAGCAGGGCTCTCTTaGCTGGATTCGCCTTTACAAAGTAACTCGCGAAGGTCCCCGGAG +
Preference number: 5 (lower is better)
Translates to: EQEVASDPGHRAGLS*LDSPLQSNSRRSPE
Trigger: CTCCGGGGACCTTCGCGAGTTACTTTGTAAAGGCGAATCCAGGCAAGAGAGCCCTGCTCGGTGTCCTGGGTCAGAGGCCACTTCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS TCA 90 bp GACCCTTTCGGAGTAGCGCTCCTCTTCAATGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGTGGGAGGAGCGTACACTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: DPFGVALLFNVTGQA*VHNTNRGRSVHSLA
Trigger: GGCCAAGGAGTGTACGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAACATTGAAGAGGAGCGCTACTCCGAAAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS GCA 90 bp CCCCAGCCCTGCTGTCTTGCCTTCCCCCATTCCATCAGTTGCCATTaGAACGCCAATCCTGTTACACGATACAGACTCGCATCGCCGAAC +
Preference number: 5 (lower is better)
Translates to: PQPCCLAFPHSISCH*NANPVTRYRLASPN
Trigger: GTTCGGCGATGCGAGTCTGTATCGTGTAACAGGATTGGCGTTGCAATGGCAACTGATGGAATGGGGGAAGGCAAGACAGCAGGGCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS GCA 90 bp CGAAGCCCCCAGCCCTGCTGTCTTGCCTTCCCCCATTCCATCAGTTaGCATTGCAACGCCAATCCTGTTACACGATACAGACTCGCATCG +
Preference number: 5 (lower is better)
Translates to: RSPQPCCLAFPHSIS*HCNANPVTRYRLAS
Trigger: CGATGCGAGTCTGTATCGTGTAACAGGATTGGCGTTGCAATGGCAACTGATGGAATGGGGGAAGGCAAGACAGCAGGGCTGGGGGCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS TCA 90 bp GACCCTTTCGGAGTAGCGCTCCTCTTCAATGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGTGGGAGGAGCTGCCTGGCAACATTC +
Preference number: 5 (lower is better)
Translates to: DPFGVALLFNVTGQA*VHNTNRGRSCLATF
Trigger: GAATGTTGCCAGGCAGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAACATTGAAGAGGAGCGCTACTCCGAAAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp ACACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGAGGTGGGAAGATTCCTaGAGACCAGCCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: TLRSCPCRISKNAGSTAGRWEDS*RPAWAT
Trigger: TGTTGCCCAGGCTGGTCTCAAGGAATCTTCCCACCT...CCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS TCA 90 bp GACCCTTTCGGAGTAGCGCTCCTCTTCAATGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGTGGGAGGAGCTTGAATAACCAGATG +
Preference number: 5 (lower is better)
Translates to: DPFGVALLFNVTGQA*VHNTNRGRSLNNQM
Trigger: CATCTGGTTATTCAAGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAACATTGAAGAGGAGCGCTACTCCGAAAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357362.7
ENST00000482848.7
CDS-3UTR CAA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAAGCGTCTGGAGCTCGCTaGGGCACACCAGCCCAGCCG +
Preference number: 5 (lower is better)
Translates to: NALENWLVKDMICRQVAQASGAR*GTPAQP
Trigger: CGGCTGGGCTGGTGTGCCCAAGCGAGCTCCAGACGC...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS CCA 90 bp GCAAGACCTCCTGGCCACGTCTCCAGCTATACCGAACAGGAGGATTaGAATTGGCAACACACCGGAGGAACACTGTTCTCTCATAGTAAA +
Preference number: 5 (lower is better)
Translates to: ARPPGHVSSYTEQED*NWQHTGGTLFSHSK
Trigger: TTTACTATGAGAGAACAGTGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTATAGCTGGAGACGTGGCCAGGAGGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS-3UTR CAA 90 bp CACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGGCCAGTTACTTGACATaGCAGTTCTATTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: HFDPVLAGFPRMLVPLQGASYLT*QFYCVS
Trigger: GGAGACACAATAGAACTGCAATGTCAAGTAACTGGC...CCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS TCA 90 bp TTACAGGCCAAGCCTGAGTGCACAATACGAACCGTGGGAGGAGCTTaGATAACCAGATGCTCGAGGCACACAATAATGAAACAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LQAKPECTIRTVGGA*ITRCSRHTIMKQLR
Trigger: CCTCAGCTGTTTCATTATTGTGTGCCTCGAGCATCTGGTTATTCAAGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS CCA 90 bp CCTCCTGGCCACGTCTCCAGCTATACCGAACAGGAGGATTGGAATTaGCAACACACCGGAGGAACACTGTTCTCTCATAGTAAAATTGTT +
Preference number: 5 (lower is better)
Translates to: PPGHVSSYTEQEDWN*QHTGGTLFSHSKIV
Trigger: AACAATTTTACTATGAGAGAACAGTGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTATAGCTGGAGACGTGGCCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS-3UTR CAA 90 bp ATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATGTACCGAACAGGAGGATaGGAATTGGCAACACACCGG +
Preference number: 5 (lower is better)
Translates to: IFTGHHKLRSCSCLLCAMYRTGG*ELATHR
Trigger: CCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTA...CATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CAA 90 bp CACTTCGATCCTGTCCTTGCCGGATTTCCAAGAATGCTGGTTCCACTGCAGGGGAGGTTTGCCAGTTACTaGACATTGCAGTTCTATTGT +
Preference number: 5 (lower is better)
Translates to: HFDPVLAGFPRMLVPLQGRFASY*TLQFYC
Trigger: ACAATAGAACTGCAATGTCAAGTAACTGGCAAACCT...CCCCTGCAGTGGAACCAGCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp GGAAAGACTCTTCACAGCGTACTCTGTGTATTCCTGAGAGTCAAATTGACCCGTAGGTCAGCACCCGTATaGGATAGGCTCTCAGTACTC +
Preference number: 5 (lower is better)
Translates to: GKTLHSVLCVFLRVKLTRRSAPV*DRLSVL
Trigger: GAGTACTGAGAGCCTATCCAATACGGGTGCTGACCT...ACGGGTCAATTTGACTCTCAGGAATACACAGAGTACGCTGTGAAGAGTCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp CTGCCTGATGCCCAACCGGTATGCAACAATCCGATCCACTGCATCAGGATTCATTCCAGCTTCCCATGTTaGTGTTATGGCTTCACTACT +
Preference number: 5 (lower is better)
Translates to: LPDAQPVCNNPIHCIRIHSSFPC*CYGFTT
Trigger: AGTAGTGAAGCCATAACACAAACATGGGAAGCTGGA...ATGAATCCTGATGCAGTGGATCGGATTGTTGCATACCGGTTGGGCATCAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp TATTACAGTGATGAAGTGCTACAGCCAAGTTCCTGCCCAGGTCTCCTGACTTCAGTAATACCGGCCTCCTaGGTGTCGCTGAATATTTGT +
Preference number: 5 (lower is better)
Translates to: YYSDEVLQPSSCPGLLTSVIPAS*VSLNIC
Trigger: ACAAATATTCAGCGACACCAAGGAGGCCGGTATTAC...TGAAGTCAGGAGACCTGGGCAGGAACTTGGCTGTAGCACTTCATCACTGTAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp CCTGTTTACAGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGTACCGAACAGGAGGATaGGAATTGGCAACACACCGG +
Preference number: 5 (lower is better)
Translates to: PVYSEVFVGRPLGFHGNKYRTGG*ELATHR
Trigger: CCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTA...CTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACTGTAAACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCTCTCCTTCACCAAATTaGGTGAGAGGAGTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFSPSPN*VRGVSR
Trigger: CCGACTGACTCCTCTCACCAAATTTGGTGAAGGAGA...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CTGCCATACTGGATTGTAGGTATCATAATAGAATTCTGGAGCATAGGCCTTTCCACAGGAGGATTGGAATaGGCAACACACCGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: LPYWIVGIIIEFWSIGLSTGGLE*ATHRRN
Trigger: GTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGT...GGAAAGGCCTATGCTCCAGAATTCTATTATGATACCTACAATCCAGTATGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp CTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTGATGTCTCAATGTACAGGAACAGCTTCTACTaGGCAAGATATTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: LRSRAFSPSNLGRDVSMYRNSFY*ARYFHL
Trigger: GAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCT...GTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAGGAGCGTACACTCCTaGGCCAGAGATCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTRSVHS*ARDPLQ
Trigger: CTGGAGGGGATCTCTGGCCAAGGAGTGTACGCTCCT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CAA 90 bp ATCTTCAGTAACTCATTCTTTAGGTTAGGCATCATCTTCTGTAGGCCTTCTATCGCACTTCCTGCTGTTTaGGTCCACCTGTGGACGTGG +
Preference number: 5 (lower is better)
Translates to: IFSNSFFRLGIIFCRPSIALPAV*VHLWTW
Trigger: CCACGTCCACAGGTGGACCAAAACAGCAGGAAGTGC...GATAGAAGGCCTACAGAAGATGATGCCTAACCTAAAGAATGAGTTACTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS TCA 90 bp TTGACATTGCAGTTCTATTGTGTCTCCTTCTCTGGTGACCAATGGTaGTTTTTCCTGTGGAACAGTCAGATTGGGTGGAACTGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LTLQFYCVSFSGDQW*FFLWNSQIGWNCAA
Trigger: AGCAGCACAGTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCATTGGTCACCAGAGAAGGAGACACAATAGAACTGCAATGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000554762.5
CDS-3UTR CAA 90 bp AAAATCTTCCAACAAGTGTTCCTGCACAGTAATAAAACAGGCAGACTCTGTCCAGCACTTCCTGCTGTTTaGGTCCACCTGATCTGTGGA +
Preference number: 5 (lower is better)
Translates to: KIFQQVFLHSNKTGRLCPALPAV*VHLICG
Trigger: TCCACAGATCAGGTGGACCAAAACAGCAGGAAGTGC...TGGACAGAGTCTGCCTGTTTTATTACTGTGCAGGAACACTTGTTGGAAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTGTGGAACAGTCAGATaGGGTGGAACTGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLCGTVR*GGTVLL
Trigger: CAGCAGCACAGTTCCACCCAATCTGACTGTTCCACA...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGAAGGTCAGCACCCGTATaGGATAGGCTCTCAGTACTC +
Preference number: 5 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGRSAPV*DRLSVL
Trigger: GAGTACTGAGAGCCTATCCAATACGGGTGCTGACCT...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CAA 90 bp CTGCCATACTGGATTGTAGGTATCATAATAGAATTCTGGAGCATAGGCCTTTCCTCTCCTTCACCAAATTaGGTGAGAGGAGTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: LPYWIVGIIIEFWSIGLSSPSPN*VRGVSR
Trigger: CCGACTGACTCCTCTCACCAAATTTGGTGAAGGAGA...GGAAAGGCCTATGCTCCAGAATTCTATTATGATACCTACAATCCAGTATGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp CTGAGAAGTCGAGCCTTTTCGCCTTCCAATCTGGGTCGTGATGTCTCAATGTACAACAATATGCAGTGTTaGTGGGTCCATAAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: LRSRAFSPSNLGRDVSMYNNMQC*WVHKGF
Trigger: AAAACCCTTATGGACCCACAAACACTGCATATTGTT...GTACATTGAGACATCACGACCCAGATTGGAAGGCGAAAAGGCTCGACTTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACACCGAGCAGGGCTCTCTaGCCTGGATTCGCCTTTACA +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTPSRAL*PGFAFT
Trigger: TGTAAAGGCGAATCCAGGCAAGAGAGCCCTGCTCGG...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS TCA 90 bp TCCGCTCTAGACCAAAGGATGATTGGTTTAGGTTTGCCAGTTACTTaGCATTGCAGTTCTATTGTGTCTCCTTCTCTGGTGACCAATGGT +
Preference number: 5 (lower is better)
Translates to: SALDQRMIGLGLPVT*HCSSIVSPSLVTNG
Trigger: ACCATTGGTCACCAGAGAAGGAGACACAATAGAACTGCAATGTCAAGTAACTGGCAAACCTAAACCAATCATCCTTTGGTCTAGAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000557238.5
CDS-3UTR CAA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGCACTTCCTGCTGTTTaGGTCCACCTGATCTGTGGA +
Preference number: 5 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFALPAV*VHLICG
Trigger: TCCACAGATCAGGTGGACCAAAACAGCAGGAAGTGC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TTTTATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCGTAATACCGGCCTCCTaGGTGTCGCTGAATATTTGT +
Preference number: 5 (lower is better)
Translates to: FYFHWTPQIEELLLSSMCVIPAS*VSLNIC
Trigger: ACAAATATTCAGCGACACCAAGGAGGCCGGTATTAC...GCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CAA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTTACCGAACAGGAGGATaGGAATTGGCAACACACCGG +
Preference number: 5 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFYRTGG*ELATHR
Trigger: CCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTA...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTTACCGAACAGGAGGATaGGAATTGGCAACACACCGG +
Preference number: 5 (lower is better)
Translates to: PSSSFIYDATVINPIVFIYRTGG*ELATHR
Trigger: CCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTA...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp TTTATTTTCACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCGGTGATGCTGTTTTATaGGACAGTCTAAACGACACC +
Preference number: 5 (lower is better)
Translates to: FIFTGHHKLRSCSCLLCAGDAVL*DSLNDT
Trigger: GGTGTCGTTTAGACTGTCCAATAAAACAGCATCACC...GGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGTGAAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CAA 90 bp CAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTATGTGGAACAGTCAGATaGGGTGGAACTGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QCPFTKTLSSCQCLVNLLCGTVR*GGTVLL
Trigger: CAGCAGCACAGTTCCACCCAATCTGACTGTTCCACA...TAAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CCTGTTTACAGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGTTGATCCATCAGGCATaGCAACTTCTTTATCCGCTC +
Preference number: 5 (lower is better)
Translates to: PVYSEVFVGRPLGFHGNKLIHQA*QLLYPL
Trigger: GAGCGGATAAAGAAGTTGCAATGCCTGATGGATCAA...CTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACTGTAAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTACTTCGATCCTGTCCTaGCCGGATTTCCAAGAATGC +
Preference number: 5 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLTSILS*PDFQEC
Trigger: GCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGT...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AAAATCTTCCAACAAGTGTTCCTGCACAGTAATAAAACAGGCAGACTCTGTCCAACTTCGATCCTGTCCTaGCCGGATTTCCAAGAATGC +
Preference number: 5 (lower is better)
Translates to: KIFQQVFLHSNKTGRLCPTSILS*PDFQEC
Trigger: GCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGT...TGGACAGAGTCTGCCTGTTTTATTACTGTGCAGGAACACTTGTTGGAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCCCCCCATTCCATCAGTaGCCATTGCAACGCCAATCC +
Preference number: 5 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLPPFHQ*PLQRQS
Trigger: GGATTGGCGTTGCAATGGCAACTGATGGAATGGGGG...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS-3UTR CAA 90 bp ACAACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTAAACCAGCCATGACTTaGTGCTTTGACAAGGATTTC +
Preference number: 5 (lower is better)
Translates to: TTNILSAWAYAAASVLSSKPAMT*CFDKDF
Trigger: GAAATCCTTGTCAAAGCACAAAGTCATGGCTGGTTT...AGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AAAATCTTCCAACAAGTGTTCCTGCACAGTAATAAAACAGGCAGACTCTGTCCATGTAATCCCAGCATTTaGAGAGGCGAAGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KIFQQVFLHSNKTGRLCPCNPSI*RGEGGK
Trigger: CTTCCCACCTTCGCCTCTCAAAATGCTGGGATTACA...TGGACAGAGTCTGCCTGTTTTATTACTGTGCAGGAACACTTGTTGGAAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS TCA 90 bp GTGTCGCTGAATATTTGTAATCCTCAAAGTCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGAGGCACTTCCTGCTGTTTTGGTCCA +
Preference number: 5 (lower is better)
Translates to: VSLNICNPQSLIEDT*VLESVRGTSCCFGP
Trigger: TGGACCAAAACAGCAGGAAGTGCCTCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGATTACAAATATTCAGCGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000486952.2
ENST00000557238.5
CDS-3UTR CAA 90 bp ACTGGACACCACAAATTGAGGAGCTGCTCCTGTCTTCTATGTGCCATGTATTGTAGCTTCACCTATACTTaGATGAACAGTTACTACTGG +
Preference number: 5 (lower is better)
Translates to: TGHHKLRSCSCLLCAMYCSFTYT*MNSYYW
Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCT...ACAATACATGGCACATAGAAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CAA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTACAGGAGGATTGGAATaGGCAACACACCGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTTGGLE*ATHRRN
Trigger: GTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGT...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AAACACACATACTGCTTGTCATACCTTACCTGGAAAGAGGCTTTATTGAACATAACAGGAGGATTGGAATaGGCAACACACCGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: KHTYCLSYLTWKEALLNITGGLE*ATHRRN
Trigger: GTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGT...TATGTTCAATAAAGCCTCTTTCCAGGTAAGGTATGACAAGCAGTATGTGTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CAA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTTACCGAACAGGAGGATaGGAATTGGCAACACACCGG +
Preference number: 5 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTYRTGG*ELATHR
Trigger: CCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTA...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCACTTCGATCCTGTCCTaGCCGGATTTCCAAGAATGC +
Preference number: 5 (lower is better)
Translates to: VVCLFNVHLQRLFLHASATSILS*PDFQEC
Trigger: GCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGT...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAGGTCAGCACCCGTATaGGATAGGCTCTCAGTACTC +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTRSAPV*DRLSVL
Trigger: GAGTACTGAGAGCCTATCCAATACGGGTGCTGACCT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTTCTCCTTCACCAAATTaGGTGAGAGGAGTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFSPSPN*VRGVSR
Trigger: CCGACTGACTCCTCTCACCAAATTTGGTGAAGGAGA...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGTCTCCTTCACCAAATTaGGTGAGAGGAGTCAGTCGG +
Preference number: 5 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLSPSPN*VRGVSR
Trigger: CCGACTGACTCCTCTCACCAAATTTGGTGAAGGAGA...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AACAAATATCTTGTCTGCATGGGCTTACGCAGCAGCTTCGGTCCTTTCTTCTTCAACAATATGCAGTGTTaGTGGGTCCATAAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: NKYLVCMGLRSSFGPFFFNNMQC*WVHKGF
Trigger: AAAACCCTTATGGACCCACAAACACTGCATATTGTT...GAAGAAGAAAGGACCGAAGCTGCTGCGTAAGCCCATGCAGACAAGATATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp ATCTTCAGTAACTCATTCTTTAGGTTAGGCATCATCTTCTGTAGGCCTTCTATCACTGGACACCACAAATaGAGGAGCTGCTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: IFSNSFFRLGIIFCRPSITGHHK*RSCSCL
Trigger: AAGACAGGAGCAGCTCCTCAATTTGTGGTGTCCAGT...GATAGAAGGCCTACAGAAGATGATGCCTAACCTAAAGAATGAGTTACTGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS TCA 90 bp ACCAGATGCTCGAGGCACACAATAATGAAACAGCTGAGGTTACTTTaGGGACTAATTTCCACTTATCATTCTGGTACAGGCTCAAGCTAT +
Preference number: 5 (lower is better)
Translates to: TRCSRHTIMKQLRLL*GLISTYHSGTGSSY
Trigger: ATAGCTTGAGCCTGTACCAGAATGATAAGTGGAAATTAGTCCTCAAAGTAACCTCAGCTGTTTCATTATTGTGTGCCTCGAGCATCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486952.2
CDS-3UTR CAA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTGCACTTCCTGCTGTTTaGGTCCACCTGATCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLALPAV*VHLICG
Trigger: TCCACAGATCAGGTGGACCAAAACAGCAGGAAGTGC...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCGCACTTCCTGCTGTTTaGGTCCACCTGATCTGTGGA +
Preference number: 5 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHAALPAV*VHLICG
Trigger: TCCACAGATCAGGTGGACCAAAACAGCAGGAAGTGC...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AATGCATTGGAAAACTGGCTGGTTAAAGATATGATTTGTCGTCAGGTAGCTCAAGTAATACCGGCCTCCTaGGTGTCGCTGAATATTTGT +
Preference number: 5 (lower is better)
Translates to: NALENWLVKDMICRQVAQVIPAS*VSLNIC
Trigger: ACAAATATTCAGCGACACCAAGGAGGCCGGTATTAC...TTGAGCTACCTGACGACAAATCATATCTTTAACCAGCCAGTTTTCCAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTGTAATACCGGCCTCCTaGGTGTCGCTGAATATTTGT +
Preference number: 5 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFVIPAS*VSLNIC
Trigger: ACAAATATTCAGCGACACCAAGGAGGCCGGTATTAC...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTACAGGAGGATTGGAATaGGCAACACACCGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASTGGLE*ATHRRN
Trigger: GTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGT...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTACAGGAGGATTGGAATaGGCAACACACCGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: CFDVAIVSLLIFEQGACITGGLE*ATHRRN
Trigger: GTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGT...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CAA 90 bp TTAGTATGCACTGCAATCCCAAACATTTTCTTGTTCCCTCTAAAGCTAGGGCCAAGGAACAGCTTCTACTaGGCAAGATATTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: LVCTAIPNIFLFPLKLGPRNSFY*ARYFHL
Trigger: GAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCT...TGGCCCTAGCTTTAGAGGGAACAAGAAAATGTTTGGGATTGCAGTGCATACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTGTGGAACAGTCAGATaGGGTGGAACTGTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLCGTVR*GGTVLL
Trigger: CAGCAGCACAGTTCCACCCAATCTGACTGTTCCACA...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAGCCAGTTACTTGACATaGCAGTTCTATTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGEASYLT*QFYCVS
Trigger: GGAGACACAATAGAACTGCAATGTCAAGTAACTGGC...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTGATCCATCAGGCATaGCAACTTCTTTATCCGCTC +
Preference number: 5 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLLIHQA*QLLYPL
Trigger: GAGCGGATAAAGAAGTTGCAATGCCTGATGGATCAA...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AAAATCTTCCAACAAGTGTTCCTGCACAGTAATAAAACAGGCAGACTCTGTCCATTGATCCATCAGGCATaGCAACTTCTTTATCCGCTC +
Preference number: 5 (lower is better)
Translates to: KIFQQVFLHSNKTGRLCPLIHQA*QLLYPL
Trigger: GAGCGGATAAAGAAGTTGCAATGCCTGATGGATCAA...TGGACAGAGTCTGCCTGTTTTATTACTGTGCAGGAACACTTGTTGGAAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCACTTCGATCCTGTCCTaGCCGGATTTCCAAGAATGC +
Preference number: 5 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLTSILS*PDFQEC
Trigger: GCATTCTTGGAAATCCGGCAAGGACAGGATCGAAGT...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTAGGTCAGCACCCGTATaGGATAGGCTCTCAGTACTC +
Preference number: 5 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASRSAPV*DRLSVL
Trigger: GAGTACTGAGAGCCTATCCAATACGGGTGCTGACCT...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAGTCCTTTATTCCCACTaGAAGACCACAGTGGATTCT +
Preference number: 5 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGEVLYSH*KTTVDS
Trigger: AGAATCCACTGTGGTCTTCAAGTGGGAATAAAGGAC...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TGCTTTGATGTTGCCATAGTGAGTTTATTAATTTTTGAACAAGGGGCATGCATTAACCGTGGGAGGAGCTaGAATAACCAGATGCTCGAG +
Preference number: 5 (lower is better)
Translates to: CFDVAIVSLLIFEQGACINRGRS*NNQMLE
Trigger: CTCGAGCATCTGGTTATTCAAGCTCCTCCCACGGTT...AATGCATGCCCCTTGTTCAAAAATTAATAAACTCACTATGGCAACATCAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CAA 90 bp GAAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAGCTATGCTGAAGTGTCTGCCATCTGGTaGAAGATACTATGTATGTTG +
Preference number: 5 (lower is better)
Translates to: ETICSVCGSIRVFGSYAEVSAIW*KILCML
Trigger: CAACATACATAGTATCTTCAACCAGATGGCAGACAC...TTCAGCATAGCTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS TCA 90 bp CAAATGAGGATTTACAGGAGCACTATATTTGATCACACGAATTGTTaGATCTCCTTCACCAAATTTGGTGAGAGGAGTCAGTCGGACTTC +
Preference number: 5 (lower is better)
Translates to: QMRIYRSTIFDHTNC*ISFTKFGERSQSDF
Trigger: GAAGTCCGACTGACTCCTCTCACCAAATTTGGTGAAGGAGATTCAACAATTCGTGTGATCAAATATAGTGCTCCTGTAAATCCTCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000555521.1
CDS CCA 90 bp TTAAACCAACTAAATGTTAGCTCCTCAGAAGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCACGGCCAATCTGGATGTTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LNQLNVSSSEGTAST*QDIFTSRPIWMLSS
Trigger: AGATGACAACATCCAGATTGGCCGTGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCTTCTGAGGAGCTAACATTTAGTTGGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000554762.5
ENST00000557238.5
CDS CCA 90 bp ATCAGGCATTGCAACTTCTTTATCCGCTCTAGACCAAAGGATGATTaGTTTAGGTTTGCCAGTTACTTGACATTGCAGTTCTATTGTGTC +
Preference number: 5 (lower is better)
Translates to: IRHCNFFIRSRPKDD*FRFASYLTLQFYCV
Trigger: GACACAATAGAACTGCAATGTCAAGTAACTGGCAAACCTAAACCAATCATCCTTTGGTCTAGAGCGGATAAAGAAGTTGCAATGCCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000557238.5
CDS-3UTR CAA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTATCCTCAAAGTCTCATaGAAGACACTTGAGTCTTGG +
Preference number: 5 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLILKVS*KTLESW
Trigger: CCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGAT...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAGTAATACCGGCCTCCTaGGTGTCGCTGAATATTTGT +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTVIPAS*VSLNIC
Trigger: ACAAATATTCAGCGACACCAAGGAGGCCGGTATTAC...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGGTGATGCTGTTTTATaGGACAGTCTAAACGACACC +
Preference number: 5 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLGDAVL*DSLNDT
Trigger: GGTGTCGTTTAGACTGTCCAATAAAACAGCATCACC...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTGGTGATGCTGTTTTATaGGACAGTCTAAACGACACC +
Preference number: 5 (lower is better)
Translates to: PSSSFIYDATVINPIVFIGDAVL*DSLNDT
Trigger: GGTGTCGTTTAGACTGTCCAATAAAACAGCATCACC...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGTTGATCCATCAGGCATaGCAACTTCTTTATCCGCTC +
Preference number: 5 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLLIHQA*QLLYPL
Trigger: GAGCGGATAAAGAAGTTGCAATGCCTGATGGATCAA...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAAACTCTCCATTTGCATaGATCCATCAGGCATTGCAA +
Preference number: 5 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGENSPFA*IHQALQ
Trigger: TTGCAATGCCTGATGGATCAATGCAAATGGAGAGTT...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTGTCCTTTATTCCCACTaGAAGACCACAGTGGATTCT +
Preference number: 5 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFVLYSH*KTTVDS
Trigger: AGAATCCACTGTGGTCTTCAAGTGGGAATAAAGGAC...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTGCTAGGTCTTGTTTaGCACATTCTCCTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VQCPFTKTLSSCQCLVNLLLGLV*HILLLQ
Trigger: TTGCAGAAGGAGAATGTGCAAAACAAGACCTAGCAA...AAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCGGTGATGCTGTTTTATaGGACAGTCTAAACGACACC +
Preference number: 5 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLGDAVL*DSLNDT
Trigger: GGTGTCGTTTAGACTGTCCAATAAAACAGCATCACC...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAGGTGATGCTGTTTTATaGGACAGTCTAAACGACACC +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTGDAVL*DSLNDT
Trigger: GGTGTCGTTTAGACTGTCCAATAAAACAGCATCACC...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTGAGGTTTTTGTTGGCAGGCCATTAGGTTTCCATGGTAACAAGCAAACTATTAGGTTTGCCAGTTACTaGACATTGCAGTTCTATTGT +
Preference number: 5 (lower is better)
Translates to: SEVFVGRPLGFHGNKQTIRFASY*TLQFYC
Trigger: ACAATAGAACTGCAATGTCAAGTAACTGGCAAACCT...AATAGTTTGCTTGTTACCATGGAAACCTAATGGCCTGCCAACAAAAACCTCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGAACTCTCCATTTGCATaGATCCATCAGGCATTGCAA +
Preference number: 5 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLNSPFA*IHQALQ
Trigger: TTGCAATGCCTGATGGATCAATGCAAATGGAGAGTT...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTAACTCTCCATTTGCATaGATCCATCAGGCATTGCAA +
Preference number: 5 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFNSPFA*IHQALQ
Trigger: TTGCAATGCCTGATGGATCAATGCAAATGGAGAGTT...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTAACTCTCCATTTGCATaGATCCATCAGGCATTGCAA +
Preference number: 5 (lower is better)
Translates to: PSSSFIYDATVINPIVFINSPFA*IHQALQ
Trigger: TTGCAATGCCTGATGGATCAATGCAAATGGAGAGTT...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGAAACAATATGCAGTGTTaGTGGGTCCATAAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGNNMQC*WVHKGF
Trigger: AAAACCCTTATGGACCCACAAACACTGCATATTGTT...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CAA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTTGCTAGGTCTTGTTTaGCACATTCTCCTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VVCLFNVHLQRLFLHASALLGLV*HILLLQ
Trigger: TTGCAGAAGGAGAATGTGCAAAACAAGACCTAGCAA...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAAGTGCAAGCTTCTGAGTaGAAAATTATTCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: VCSMSIYKDSFFMPVPGEVQASE*KIIQAC
Trigger: ACAAGCCTGAATAATTTTCAACTCAGAAGCTTGCAC...TTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CAAAGGTTTAACTGCTTTCTGCATGTATTACAATATAGGGGAGTGCATCAGGGAAAACACACATACTGCTaGTCATACCTTACCTGGAAA +
Preference number: 5 (lower is better)
Translates to: QRFNCFLHVLQYRGVHQGKHTYC*SYLTWK
Trigger: TTTCCAGGTAAGGTATGACAAGCAGTATGTGTGTTT...TCCCTGATGCACTCCCCTATATTGTAATACATGCAGAAAGCAGTTAAACCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CAA 90 bp GCATCTCCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTGGCAATTATGCGATTaGTTTCCTTTCATTGGTTCT +
Preference number: 5 (lower is better)
Translates to: ASPSSSFIYDATVINPIVWQLCD*FPFIGS
Trigger: AGAACCAATGAAAGGAAACAAATCGCATAATTGCCA...AACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGGAGATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS TCA 90 bp TATATTAACATGAGCCTCATTCCATCTTTGTCCTTTATTCCCACTTaGAGACCACAGTGGATTCTCTATTGTTGTTTGCCCTTTCAAACG +
Preference number: 5 (lower is better)
Translates to: YINMSLIPSLSFIPT*RPQWILYCCLPFQT
Trigger: CGTTTGAAAGGGCAAACAACAATAGAGAATCCACTGTGGTCTTCAAGTGGGAATAAAGGACAAAGATGGAATGAGGCTCATGTTAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS TCA 90 bp TTGCTATCTCACCTATATGTTGTCCATACATGTGATAAAAGAAGCTaGAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: LLSHLYVVHTCDKRS*NNMQCLWVHKGFWE
Trigger: CTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTCAGCTTCTTTTATCACATGTATGGACAACATATAGGTGAGATAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557516.1
CDS-3UTR CAA 90 bp GAGTCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTAGCTTCACCTATACTTaGATGAACAGTTACTACTGG +
Preference number: 5 (lower is better)
Translates to: ESVVSGGIFGSLFVQCPFSFTYT*MNSYYW
Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCT...AAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTAGCTTCACCTATACTTaGATGAACAGTTACTACTGG +
Preference number: 5 (lower is better)
Translates to: PSSSFIYDATVINPIVFISFTYT*MNSYYW
Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCT...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAGGAACAGCTTCTACTaGGCAAGATATTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTRNSFY*ARYFHL
Trigger: GAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTATTCCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGAGGAACAGCTTCTACTaGGCAAGATATTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: SIPLYCKQIGTSKVSFGLRNSFY*ARYFHL
Trigger: GAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCT...CAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGGAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS-3UTR CAA 90 bp TCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCGCCAGTTACTTGACATaGCAGTTCTATTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLVVCLFNVHLQRLFLHAASYLT*QFYCVS
Trigger: GGAGACACAATAGAACTGCAATGTCAAGTAACTGGC...GGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTGCCAGTTACTTGACATaGCAGTTCTATTGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSASYLT*QFYCVS
Trigger: GGAGACACAATAGAACTGCAATGTCAAGTAACTGGC...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGAATCTTTTAGGTTTGCCAGTTACTaGACATTGCAGTTCTATTGT +
Preference number: 5 (lower is better)
Translates to: SMSIYKDSFFMPVPGESFRFASY*TLQFYC
Trigger: ACAATAGAACTGCAATGTCAAGTAACTGGCAAACCT...AAAAGATTCACCAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCGTTAAATCCATTGTATaGGCTGGTCTGACATCTGTA +
Preference number: 5 (lower is better)
Translates to: VVCLFNVHLQRLFLHASAVKSIV*AGLTSV
Trigger: TACAGATGTCAGACCAGCCAATACAATGGATTTAAC...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp CCCAGCTCCAGCTTCATTTATGATGCTACAGTTATAAACCCCATAGTTTTCATTGTTAAATCCATTGTATaGGCTGGTCTGACATCTGTA +
Preference number: 5 (lower is better)
Translates to: PSSSFIYDATVINPIVFIVKSIV*AGLTSV
Trigger: TACAGATGTCAGACCAGCCAATACAATGGATTTAAC...AATGAAAACTATGGGGTTTATAACTGTAGCATCATAAATGAAGCTGGAGCTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS-3UTR CAA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTGTCCTTTATTCCCACTaGAAGACCACAGTGGATTCT +
Preference number: 5 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFVLYSH*KTTVDS
Trigger: AGAATCCACTGTGGTCTTCAAGTGGGAATAAAGGAC...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACATTGCTAGGTCTTGTTTaGCACATTCTCCTTCTGCAA +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTLLGLV*HILLLQ
Trigger: TTGCAGAAGGAGAATGTGCAAAACAAGACCTAGCAA...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAACCAGCCATGACTTaGTGCTTTGACAAGGATTTC +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTKPAMT*CFDKDF
Trigger: GAAATCCTTGTCAAAGCACAAAGTCATGGCTGGTTT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCTGGTGCAAGCTTCTGAGTaGAAAATTATTCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: SLFVQCPFTKTLSSCQCLVQASE*KIIQAC
Trigger: ACAAGCCTGAATAATTTTCAACTCAGAAGCTTGCAC...CAGGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAACCTTTTGCTCTGGTaGACCCATTTAATAACCTGG +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTNLLLW*THLITW
Trigger: CCAGGTTATTAAATGGGTCAACCAGAGCAAAAGGTT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS TCA 90 bp TCTAAACGACACCATCTTATCAGGAATATTACATACATTCCTCACTaGAGCAATGCAGCTATAATTAGCATAGTCCTGAGGTCGAAGATT +
Preference number: 5 (lower is better)
Translates to: SKRHHLIRNITYIPH*SNAAIISIVLRSKI
Trigger: AATCTTCGACCTCAGGACTATGCTAATTATAGCTGCATTGCTTCAGTGAGGAATGTATGTAATATTCCTGATAAGATGGTGTCGTTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000554762.5
ENST00000557238.5
CDS TCA 90 bp CATTTAAGACACCTATATGTTGTCCATACATGTGATAAAAGAAGCTaGAACAATATGCAGTGTTTGTGGGTCCATAAGGGTTTTTGGGAG +
Preference number: 5 (lower is better)
Translates to: HLRHLYVVHTCDKRS*NNMQCLWVHKGFWE
Trigger: CTCCCAAAAACCCTTATGGACCCACAAACACTGCATATTGTTTCAGCTTCTTTTATCACATGTATGGACAACATATAGGTGTCTTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTAGCTTCACCTATACTTaGATGAACAGTTACTACTGG +
Preference number: 5 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTSFTYT*MNSYYW
Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCT...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTAGGAACAGCTTCTACTaGGCAAGATATTTTCACCTC +
Preference number: 5 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFRNSFY*ARYFHL
Trigger: GAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCT...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAGTTAAATCCATTGTATaGGCTGGTCTGACATCTGTA +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTVKSIV*AGLTSV
Trigger: TACAGATGTCAGACCAGCCAATACAATGGATTTAAC...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTGCCACAGGAGCACTATATTaGATCACACGAATTGTTGAA +
Preference number: 5 (lower is better)
Translates to: VVCLFNVHLQRLFLHASATGALY*ITRIVE
Trigger: TTCAACAATTCGTGTGATCAAATATAGTGCTCCTGT...GGCACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTAACAATATGCAGTGTTaGTGGGTCCATAAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTNNMQC*WVHKGF
Trigger: AAAACCCTTATGGACCCACAAACACTGCATATTGTT...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCGTGGATTCTCTATTGTaGTTTGCCCTTTCAAACGTA +
Preference number: 5 (lower is better)
Translates to: SVEESLVVCLFNVHLQRLVDSLL*FALSNV
Trigger: TACGTTTGAAAGGGCAAACAACAATAGAGAATCCAC...GAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTGTGGATTCTCTATTGTaGTTTGCCCTTTCAAACGTA +
Preference number: 5 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTVDSLL*FALSNV
Trigger: TACGTTTGAAAGGGCAAACAACAATAGAGAATCCAC...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTAGCTTCACCTATACTTaGATGAACAGTTACTACTGG +
Preference number: 5 (lower is better)
Translates to: VEESLVVCLFNVHLQRLFSFTYT*MNSYYW
Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCT...AAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTTCATGCCAGTAGGTTTGCCAGTTACTaGACATTGCAGTTCTATTGT +
Preference number: 5 (lower is better)
Translates to: LVVCLFNVHLQRLFLHASRFASY*TLQFYC
Trigger: ACAATAGAACTGCAATGTCAAGTAACTGGCAAACCT...ACTGGCATGAAGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTTCTGTTAAATCCATTGTATaGGCTGGTCTGACATCTGTA +
Preference number: 5 (lower is better)
Translates to: GGIFGSLFVQCPFTKTLSVKSIV*AGLTSV
Trigger: TACAGATGTCAGACCAGCCAATACAATGGATTTAAC...AGAAAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp TCAGTAGTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAACAGGAGCACTATATTaGATCACACGAATTGTTGAA +
Preference number: 5 (lower is better)
Translates to: SVVSGGIFGSLFVQCPFTTGALY*ITRIVE
Trigger: TTCAACAATTCGTGTGATCAAATATAGTGCTCCTGT...TGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGACTACTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTCTTGTGGATTCTCTATTGTaGTTTGCCCTTTCAAACGTA +
Preference number: 5 (lower is better)
Translates to: SGGIFGSLFVQCPFTKTLVDSLL*FALSNV
Trigger: TACGTTTGAAAGGGCAAACAACAATAGAGAATCCAC...AAGAGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp GTCAGTGGAGGAATCTTTGGTAGTTTGTTTGTTCAATGTCCATTTACAAAGACTATAAAAGATGGTGGTTaGGTTTCTTCATTGGAACAG +
Preference number: 5 (lower is better)
Translates to: VSGGIFGSLFVQCPFTKTIKDGG*VSSLEQ
Trigger: CTGTTCCAATGAAGAAACCAAACCACCATCTTTTAT...AGTCTTTGTAAATGGACATTGAACAAACAAACTACCAAAGATTCCTCCACTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399232.8
ENST00000426342.7
CDS-3UTR CAA 90 bp AATGCCCCAGATATTGTGTACTTGAATCTCTTTGGTCTGATAAAGTATATGGGTATAAAAGATGGTGGTTaGGTTTCTTCATTGGAACAG +
Preference number: 5 (lower is better)
Translates to: NAPDIVYLNLFGLIKYMGIKDGG*VSSLEQ
Trigger: CTGTTCCAATGAAGAAACCAAACCACCATCTTTTAT...ACCCATATACTTTATCAGACCAAAGAGATTCAAGTACACAATATCTGGGGCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS-3UTR CAA 90 bp AGTATTCCACTCTATTGTAAGCAAATTGGAACATCAAAGGTCAGTTTTGGCTTGTCCAGGGGTAGTGTTTaGGAAGAAGTCAATATATTT +
Preference number: 5 (lower is better)
Translates to: SIPLYCKQIGTSKVSFGLSRGSV*EEVNIF
Trigger: AAATATATTGACTTCTTCCAAAACACTACCCCTGGA...CAAGCCAAAACTGACCTTTGATGTTCCAATTTGCTTACAATAGAGTGGAATACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS GCA 72 bp GTGTTCTTCAGGGAAGCGGGCTCGAGTCTCCGCAGCTaGGGCGGCGGCGGCGGCGCGCTGGGCCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: VFFREAGSSLRS*GGGGGALGRRR
Trigger: CCGCCGCCGGCCCAGCGCGCCGCCGCCGCCGCCGCAGCTGCGGAGACTCGAGCCCGCTTCCCTGAAGAACAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS GCA 72 bp CAGGCGCGCTCCACTCGCGCCCGGGCCAAGCCGAGGTaGCCGGGAACCGCTCGCCGAAGGAGGAAGCGCCGT +
Preference number: 6 (lower is better)
Translates to: QARSTRARAKPR*PGTARRRRKRR
Trigger: ACGGCGCTTCCTCCTTCGGCGAGCGGTTCCCGGGCACCTCGGCTTGGCCCGGGCGCGAGTGGAGCGCGCCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS GCA 72 bp CTCTGGCCGCGCTTGAGGAGCCCTTCAGCCCGCCGCTaGACTGTGGGAGCCCCTTTCTGGGCTGGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: LWPRLRSPSARR*TVGAPFWAGQG
Trigger: GCCTTGGCCAGCCCAGAAAGGGGCTCCCACAGTGCAGCGGCGGGCTGAAGGGCTCCTCAAGCGCGGCCAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS CCA 72 bp TCGCTCTCGGCGCCTCCTCGGCTTTGGCACTCACTCTaGCCGCGCTTGAGGAGCCCTTCAGCCCGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: SLSAPPRLWHSL*PRLRSPSARRC
Trigger: GCAGCGGCGGGCTGAAGGGCTCCTCAAGCGCGGCCAGAGTGAGTGCCAAAGCCGAGGAGGCGCCGAGAGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS CAA 72 bp GTCCAACAGGGAGCGGAGTGTGCGTCTGGAGCTCGCTaGGGCACACCAGCCCAGCCGCCACCGCCACCGCTC +
Preference number: 6 (lower is better)
Translates to: VQQGAECASGAR*GTPAQPPPPPL
Trigger: GAGCGGTGGCGGTGGCGGCTGGGCTGGTGTGCCCAAGCGAGCTCCAGACGCACACTCCGCTCCCTGTTGGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS CAA 90 bp TCGCTCTCGGCGCCTCCTCGGCTTTGGCACTCACTCTGGCCGCGCTaGAGGAGCCCTTCAGCCCGCCGCTGCACTGTGGGAGCCCCTTTC +
Preference number: 6 (lower is better)
Translates to: SLSAPPRLWHSLWPR*RSPSARRCTVGAPF
Trigger: GAAAGGGGCTCCCACAGTGCAGCGGCGGGCTGAAGGGCTCCTCAAGCGCGGCCAGAGTGAGTGCCAAAGCCGAGGAGGCGCCGAGAGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS CCA 72 bp TCCAACAGGGAGCGGAGTGTGCGTCTGGAGCTCGCTTaGGCACACCAGCCCAGCCGCCACCGCCACCGCTCT +
Preference number: 6 (lower is better)
Translates to: SNRERSVRLELA*AHQPSRHRHRS
Trigger: AGAGCGGTGGCGGTGGCGGCTGGGCTGGTGTGCCCAAGCGAGCTCCAGACGCACACTCCGCTCCCTGTTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS CCA 72 bp GGAGGAAAGGGTCCAACAGGGAGCGGAGTGTGCGTCTaGAGCTCGCTTGGGCACACCAGCCCAGCCGCCACC +
Preference number: 6 (lower is better)
Translates to: GGKGPTGSGVCV*SSLGHTSPAAT
Trigger: GGTGGCGGCTGGGCTGGTGTGCCCAAGCGAGCTCCAGACGCACACTCCGCTCCCTGTTGGACCCTTTCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS CCA 72 bp CACAGCCCTCCTTCGCTCTCGGCGCCTCCTCGGCTTTaGCACTCACTCTGGCCGCGCTTGAGGAGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: HSPPSLSAPPRL*HSLWPRLRSPS
Trigger: TGAAGGGCTCCTCAAGCGCGGCCAGAGTGAGTGCCAAAGCCGAGGAGGCGCCGAGAGCGAAGGAGGGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS CCA 72 bp TCTTCCTGTCCGCTACACTGTGAGGTGACAGCCAGCTaGCAGCCCTCACAGCCCTCCTTCGCTCTCGGCGCC +
Preference number: 6 (lower is better)
Translates to: SSCPLHCEVTAS*QPSQPSFALGA
Trigger: GGCGCCGAGAGCGAAGGAGGGCTGTGAGGGCTGCCAGCTGGCTGTCACCTCACAGTGTAGCGGACAGGAAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS CAA 90 bp GAGGAAAGGGTCCAACAGGGAGCGGAGTGTGCGTCTGGAGCTCGCTaGGGCACACCAGCCCAGCCGCCACCGCCACCGCTCTCCAAAATA +
Preference number: 6 (lower is better)
Translates to: EERVQQGAECASGAR*GTPAQPPPPPLSKI
Trigger: TATTTTGGAGAGCGGTGGCGGTGGCGGCTGGGCTGGTGTGCCCAAGCGAGCTCCAGACGCACACTCCGCTCCCTGTTGGACCCTTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS GCA 72 bp GAGCGGAGCGCAGGAGCCCCGCACTCCACACACTCATaGACACACACACTCACACACACTCACACACTCTCC +
Preference number: 6 (lower is better)
Translates to: ERSAGAPHSTHS*THTLTHTHTLS
Trigger: GGAGAGTGTGTGAGTGTGTGTGAGTGTGTGTGTGCATGAGTGTGTGGAGTGCGGGGCTCCTGCGCTCCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS GCA 72 bp GTGGCCTCTGACCCAGGACACCGAGCAGGGCTCTCTTaGCTGGATTCGCCTTTACAAAGTAACTCGCGAAGG +
Preference number: 6 (lower is better)
Translates to: VASDPGHRAGLS*LDSPLQSNSRR
Trigger: CCTTCGCGAGTTACTTTGTAAAGGCGAATCCAGGCAAGAGAGCCCTGCTCGGTGTCCTGGGTCAGAGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS CAA 90 bp CCGAAGCCCCCAGCCCTGCTGTCTTGCCTTCCCCCATTCCATCAGTaGCCATTGCAACGCCAATCCTGTTACACGATACAGACTCGCATC +
Preference number: 6 (lower is better)
Translates to: PKPPALLSCLPPFHQ*PLQRQSCYTIQTRI
Trigger: GATGCGAGTCTGTATCGTGTAACAGGATTGGCGTTGCAATGGCAACTGATGGAATGGGGGAAGGCAAGACAGCAGGGCTGGGGGCTTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS TCA 72 bp TCAGCCACAGAGTGGGAGAAGCAGGCAGCACTACCGTaGGTCCTGCGGCAGATCCCAAGGGATTCATACTTG +
Preference number: 6 (lower is better)
Translates to: SATEWEKQAALP*VLRQIPRDSYL
Trigger: CAAGTATGAATCCCTTGGGATCTGCCGCAGGACTCACGGTAGTGCTGCCTGCTTCTCCCACTCTGTGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486952.2
CDS TCA 72 bp GGAGTAGCGCTCCTCTTCAATGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGTGGGAGGAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: GVALLFNVTGQA*VHNTNRGRSCL
Trigger: CAGGCAGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAACATTGAAGAGGAGCGCTACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557238.5
CDS TCA 72 bp GGAGTAGCGCTCCTCTTCAATGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGTGGGAGGAGCGTACAC +
Preference number: 6 (lower is better)
Translates to: GVALLFNVTGQA*VHNTNRGRSVH
Trigger: GTGTACGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAACATTGAAGAGGAGCGCTACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399232.8
CDS TCA 72 bp GGAGTAGCGCTCCTCTTCAATGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGTGGGAGGAGCTGTCGA +
Preference number: 6 (lower is better)
Translates to: GVALLFNVTGQA*VHNTNRGRSCR
Trigger: TCGACAGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAACATTGAAGAGGAGCGCTACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426342.7
CDS CCA 72 bp GTCACAGTAGTAGGAGGAAGGAAAGGCAGCTTTGCCTaGCAGAATGCTACCTCAGGGGAGTCAGCCACAGAG +
Preference number: 6 (lower is better)
Translates to: VTVVGGRKGSFA*QNATSGESATE
Trigger: CTCTGTGGCTGACTCCCCTGAGGTAGCATTCTGCCAGGCAAAGCTGCCTTTCCTTCCTCCTACTACTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486952.2
CDS CAA 72 bp TCCTGGCCACGTCTCCAGCTATACCGAACAGGAGGATaGGAATTGGCAACACACCGGAGGAACACTGTTCTC +
Preference number: 6 (lower is better)
Translates to: SWPRLQLYRTGG*ELATHRRNTVL
Trigger: GAGAACAGTGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTATAGCTGGAGACGTGGCCAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS TCA 72 bp GGAGTAGCGCTCCTCTTCAATGTTACAGGCCAAGCCTaGGTGCACAATACGAACCGTGGGAGGAGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: GVALLFNVTGQA*VHNTNRGRSLN
Trigger: ATTCAAGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTTGGCCTGTAACATTGAAGAGGAGCGCTACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357362.7
ENST00000482848.7
CDS CAA 90 bp GGGTTAAGATCTCCTTTGCCCTTGCCACTGTACAGCCTTATCAGCTaGCCACTATGTCTCAGACATAGGAGAGACACTGGAGAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: GLRSPLPLPLYSLIS*PLCLRHRRDTGEAL
Trigger: CAAGGCCTCTCCAGTGTCTCTCCTATGTCTGAGACATAGTGGCAAGCTGATAAGGCTGTACAGTGGCAAGGGCAAAGGAGATCTTAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472499.2
CDS TCA 72 bp TGCTGTTTTGGTCCACCTGTGGACGTGGATGTCCTGTaGCTAGACAAGTCAACTCAAGGGTTTCTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: CCFGPPVDVDVL*LDKSTQGFLLP
Trigger: GGGAAGGAGAAACCCTTGAGTTGACTTGTCTAGTCACAGGACATCCACGTCCACAGGTGGACCAAAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS GCA 72 bp CTCCTTTGCCCTTGCCACTGTACAGCCTTATCAGCTTaGCACTATGTCTCAGACATAGGAGAGACACTGGAG +
Preference number: 6 (lower is better)
Translates to: LLCPCHCTALSA*HYVSDIGETLE
Trigger: CTCCAGTGTCTCTCCTATGTCTGAGACATAGTGGCAAGCTGATAAGGCTGTACAGTGGCAAGGGCAAAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472499.2
CDS CCA 72 bp TCAACTCCTTTATCAGATCCTTGCAGCAAGACCTCCTaGCCACGTCTCCAGCTATACCGAACAGGAGGATTG +
Preference number: 6 (lower is better)
Translates to: STPLSDPCSKTS*PRLQLYRTGGL
Trigger: CAATCCTCCTGTTCGGTATAGCTGGAGACGTGGCCAGGAGGTCTTGCTGCAAGGATCTGATAAAGGAGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS CCA 72 bp CACGTCTCCAGCTATACCGAACAGGAGGATTGGAATTaGCAACACACCGGAGGAACACTGTTCTCTCATAGT +
Preference number: 6 (lower is better)
Translates to: HVSSYTEQEDWN*QHTGGTLFSHS
Trigger: ACTATGAGAGAACAGTGTTCCTCCGGTGTGTTGCCAATTCCAATCCTCCTGTTCGGTATAGCTGGAGACGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS TCA 72 bp AAGCCTGAGTGCACAATACGAACCGTGGGAGGAGCTTaGATAACCAGATGCTCGAGGCACACAATAATGAAA +
Preference number: 6 (lower is better)
Translates to: KPECTIRTVGGA*ITRCSRHTIMK
Trigger: TTTCATTATTGTGTGCCTCGAGCATCTGGTTATTCAAGCTCCTCCCACGGTTCGTATTGTGCACTCAGGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS CAA 90 bp TGGAGACCCCAAGCCATTCTCTGCTTTACAGTAATACCGGCCTCCTaGGTGTCGCTGAATATTTGTAATCCTCAAAGTCTCATTGAAGAC +
Preference number: 6 (lower is better)
Translates to: WRPQAILCFTVIPAS*VSLNICNPQSLIED
Trigger: GTCTTCAATGAGACTTTGAGGATTACAAATATTCAGCGACACCAAGGAGGCCGGTATTACTGTAAAGCAGAGAATGGCTTGGGGTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS TCA 72 bp CAGTTCTATTGTGTCTCCTTCTCTGGTGACCAATGGTaGTTTTTCCTGTGGAACAGTCAGATTGGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: QFYCVSFSGDQW*FFLWNSQIGWN
Trigger: GTTCCACCCAATCTGACTGTTCCACAGGAAAAATCACCATTGGTCACCAGAGAAGGAGACACAATAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000554762.5
CDS CAA 72 bp GCTATGAACACAAAAGGTCATACCCCCATACCTTCTTaGGAGCCACTACGGTCAGCATTAGGTCCTGTATTA +
Preference number: 6 (lower is better)
Translates to: AMNTKGHTPIPS*EPLRSALGPVL
Trigger: TAATACAGGACCTAATGCTGACCGTAGTGGCTCCAAAGAAGGTATGGGGGTATGACCTTTTGTGTTCATAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555521.1
CDS CAA 90 bp ATCCGCTCTAGACCAAAGGATGATTGGTTTAGGTTTGCCAGTTACTaGACATTGCAGTTCTATTGTGTCTCCTTCTCTGGTGACCAATGG +
Preference number: 6 (lower is better)
Translates to: IRSRPKDDWFRFASY*TLQFYCVSFSGDQW
Trigger: CCATTGGTCACCAGAGAAGGAGACACAATAGAACTGCAATGTCAAGTAACTGGCAAACCTAAACCAATCATCCTTTGGTCTAGAGCGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000557238.5
CDS TCA 72 bp TACTGGATCATCCAAATAGTATACATCCACTCTGATTaGCTTTATCGCTGGAGACCCCAAGCCATTCTCTGC +
Preference number: 6 (lower is better)
Translates to: YWIIQIVYIHSD*LYRWRPQAILC
Trigger: GCAGAGAATGGCTTGGGGTCTCCAGCGATAAAGTCAATCAGAGTGGATGTATACTATTTGGATGATCCAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS CCA 72 bp CTAAATGTTAGCTCCTCAGAAGGAACAGCTTCTACTTaGCAAGATATTTTCACCTCACGGCCAATCTGGATG +
Preference number: 6 (lower is better)
Translates to: LNVSSSEGTAST*QDIFTSRPIWM
Trigger: CATCCAGATTGGCCGTGAGGTGAAAATATCTTGCCAAGTAGAAGCTGTTCCTTCTGAGGAGCTAACATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000554762.5
ENST00000557238.5
CDS CAA 72 bp CAAGCCATTCTCTGCTTTACAGTAATACCGGCCTCCTaGGTGTCGCTGAATATTTGTAATCCTCAAAGTCTC +
Preference number: 6 (lower is better)
Translates to: QAILCFTVIPAS*VSLNICNPQSL
Trigger: GAGACTTTGAGGATTACAAATATTCAGCGACACCAAGGAGGCCGGTATTACTGTAAAGCAGAGAATGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000486952.2
ENST00000557238.5
CDS CAA 90 bp TCTCTGATTGCTATGAACACAAAAGGTCATACCCCCATACCTTCTTaGGAGCCACTACGGTCAGCATTAGGTCCTGTATTAGGAGTATAT +
Preference number: 6 (lower is better)
Translates to: SLIAMNTKGHTPIPS*EPLRSALGPVLGVY
Trigger: ATATACTCCTAATACAGGACCTAATGCTGACCGTAGTGGCTCCAAAGAAGGTATGGGGGTATGACCTTTTGTGTTCATAGCAATCAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555521.1
CDS TCA 72 bp ATGAGCCTCATTCCATCTTTGTCCTTTATTCCCACTTaGAGACCACAGTGGATTCTCTATTGTTGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: MSLIPSLSFIPT*RPQWILYCCLP
Trigger: GGGCAAACAACAATAGAGAATCCACTGTGGTCTTCAAGTGGGAATAAAGGACAAAGATGGAATGAGGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS TCA 72 bp CCAAGGGATTCATACTTGAACATGGAAGCCTCACCTTaGATAACCAGATGCTCGAGGCACACAATAATGAAA +
Preference number: 6 (lower is better)
Translates to: PRDSYLNMEASP*ITRCSRHTIMK
Trigger: TTTCATTATTGTGTGCCTCGAGCATCTGGTTATTCAAGGTGAGGCTTCCATGTTCAAGTATGAATCCCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486952.2
CDS CAA 90 bp AACCAGATGCTCGAGGCACACAATAATGAAACAGCTGAGGTTACTTaGAGGACTAATTTCCACTTATCATTCTGGTACAGGCTCAAGCTA +
Preference number: 6 (lower is better)
Translates to: NQMLEAHNNETAEVT*RTNFHLSFWYRLKL
Trigger: TAGCTTGAGCCTGTACCAGAATGATAAGTGGAAATTAGTCCTCAAAGTAACCTCAGCTGTTTCATTATTGTGTGCCTCGAGCATCTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486952.2
CDS TCA 72 bp TTACTACTGGATCATCCAAATAGTATACATCCACTCTaGTTGACTTTATCGCTGGAGACCCCAAGCCATTCT +
Preference number: 6 (lower is better)
Translates to: LLLDHPNSIHPL*LTLSLETPSHS
Trigger: AGAATGGCTTGGGGTCTCCAGCGATAAAGTCAATCAGAGTGGATGTATACTATTTGGATGATCCAGTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS GCA 72 bp GATACTGATATCAGATATTCCTCCTCCCTTCAGAGATaGTACACATGTGTACGTCCCAAAATCCGTGAATTT +
Preference number: 6 (lower is better)
Translates to: DTDIRYSSSLQR*YTCVRPKIREF
Trigger: AAATTCACGGATTTTGGGACGTACACATGTGTAGCATCTCTGAAGGGAGGAGGAATATCTGATATCAGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000554762.5
ENST00000557238.5
CDS CCA 72 bp CATTCTATGGAGAAACCACATCTATCTGTAGTTAAGTaGGTACTTTCCAGGGGTAGTGTTTTGGAAGAAGTC +
Preference number: 6 (lower is better)
Translates to: HSMEKPHLSVVK*VLSRGSVLEEV
Trigger: GACTTCTTCCAAAACACTACCCCTGGAAAGTACCCACTTAACTACAGATAGATGTGGTTTCTCCATAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482848.7
CDS CAA 72 bp AGACCAAAGGATGATTGGTTTAGGTTTGCCAGTTACTaGACATTGCAGTTCTATTGTGTCTCCTTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: RPKDDWFRFASY*TLQFYCVSFSG
Trigger: ACCAGAGAAGGAGACACAATAGAACTGCAATGTCAAGTAACTGGCAAACCTAAACCAATCATCCTTTGGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000554762.5
ENST00000557238.5
CDS CAA 90 bp GGAATTGGCAACACACCGGAGGAACACTGTTCTCTCATAGTAAAATaGTTCTTTAGCTTCACCTATACTTTGATGAACAGTTACTACTGG +
Preference number: 6 (lower is better)
Translates to: GIGNTPEEHCSLIVK*FFSFTYTLMNSYYW
Trigger: CCAGTAGTAACTGTTCATCAAAGTATAGGTGAAGCTAAAGAACAATTTTACTATGAGAGAACAGTGTTCCTCCGGTGTGTTGCCAATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000557238.5
CDS TCA 72 bp AATATTTGTAATCCTCAAAGTCTCATTGAAGACACTTaGGTCTTGGAATCTGTCAGAGGCACTTCCTGCTGT +
Preference number: 6 (lower is better)
Translates to: NICNPQSLIEDT*VLESVRGTSCC
Trigger: ACAGCAGGAAGTGCCTCTGACAGATTCCAAGACTCAAGTGTCTTCAATGAGACTTTGAGGATTACAAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000486952.2
ENST00000557238.5
CDS TCA 72 bp CACCATCTTATCAGGAATATTACATACATTCCTCACTaGAGCAATGCAGCTATAATTAGCATAGTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: HHLIRNITYIPH*SNAAIISIVLR
Trigger: CCTCAGGACTATGCTAATTATAGCTGCATTGCTTCAGTGAGGAATGTATGTAATATTCCTGATAAGATGGTG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000482848.7
ENST00000554762.5
ENST00000557238.5
CDS TCA 72 bp ATTTACAGGAGCACTATATTTGATCACACGAATTGTTaGATCTCCTTCACCAAATTTGGTGAGAGGAGTCAG +
Preference number: 6 (lower is better)
Translates to: IYRSTIFDHTNC*ISFTKFGERSQ
Trigger: CTGACTCCTCTCACCAAATTTGGTGAAGGAGATTCAACAATTCGTGTGATCAAATATAGTGCTCCTGTAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000555521.1
CDS CAA 72 bp TATTCCCACTTGAAGACCACAGTGGATTCTCTATTGTaGTTTGCCCTTTCAAACGTAGATAAACATTTAAGA +
Preference number: 6 (lower is better)
Translates to: YSHLKTTVDSLL*FALSNVDKHLR
Trigger: TCTTAAATGTTTATCTACGTTTGAAAGGGCAAACAACAATAGAGAATCCACTGTGGTCTTCAAGTGGGAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS CAA 72 bp CTTTATTCCCACTTGAAGACCACAGTGGATTCTCTATaGTTGTTTGCCCTTTCAAACGTAGATAAACATTTA +
Preference number: 6 (lower is better)
Translates to: LYSHLKTTVDSL*LFALSNVDKHL
Trigger: TAAATGTTTATCTACGTTTGAAAGGGCAAACAACAATAGAGAATCCACTGTGGTCTTCAAGTGGGAATAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
CDS TCA 72 bp ATTCTCTCAAATGAGGATTTACAGGAGCACTATATTTaGTCACACGAATTGTTGAATCTCCTTCACCAAATT +
Preference number: 6 (lower is better)
Translates to: ILSNEDLQEHYI*SHELLNLLHQI
Trigger: AATTTGGTGAAGGAGATTCAACAATTCGTGTGATCAAATATAGTGCTCCTGTAAATCCTCATTTGAGAGAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357362.7
ENST00000399232.8
ENST00000426342.7
ENST00000555521.1