RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MDGA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112139

Ensembl transcript IDs: ENST00000373401.2, ENST00000418178.2, ENST00000434837.8, ENST00000478143.2, ENST00000502298.1, ENST00000505425.5, ENST00000508399.1, ENST00000510077.1, ENST00000515437.5, ENST00000650466.1, ENST00000680397.1, ENST00000681439.1, ENST00000681472.1

Found 1777 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTGGGCTGGACTaGCAGGGGGCTCCACTGCCCGGCATCACCACCACTTTATTGGGA +
Preference number: 1 (lower is better)
Translates to: AKRKMAMGPHSCGLD*QGAPLPGITTTLLG
Trigger: TCCCAATAAAGTGGTGGTGATGCCGGGCAGTGGAGCCCCCTGCCAGTCCAGCCCACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR CCA 90 bp GGTGGCCACACAGCTCTCATCATCTCTGCAACGCCAAGAGGAAGATaGCCATGGGCCCCCACAGCTGTGGGCTGGACTGGCAGGGGGCTC +
Preference number: 1 (lower is better)
Translates to: GGHTALIISATPRGR*PWAPTAVGWTGRGL
Trigger: GAGCCCCCTGCCAGTCCAGCCCACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGTGTGGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR TCA 90 bp TCATTTCAGACAGAGGCCTTGACTGGGTCAGGAAGGCAGCCGTGCTaGTTGGGCATCAGAAGGCCCCGCTGCATCCTGGCCCGGCCACCC +
Preference number: 1 (lower is better)
Translates to: SFQTEALTGSGRQPC*LGIRRPRCILARPP
Trigger: GGGTGGCCGGGCCAGGATGCAGCGGGGCCTTCTGATGCCCAATCAGCACGGCTGCCTTCCTGACCCAGTCAAGGCCTCTGTCTGAAATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp GAGAGGCGGGTGCTTCCCGGCCTTTGGAAGCATGGAGGACTCCGCTaGACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACTCTC +
Preference number: 1 (lower is better)
Translates to: ERRVLPGLWKHGGLR*TLNPTSASGSAGTL
Trigger: GAGAGTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCATGCTTCCAAAGGCCGGGAAGCACCCGCCTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp GGCCAGGAAGGAGGGCAGTCCTATCCTAGGAGGGTCCCTGGGAAATaGGTGCAGGCAACAAGAGGGCAAGGGGTGGGGTGGGCAGATGCC +
Preference number: 1 (lower is better)
Translates to: GQEGGQSYPRRVPGK*VQATRGQGVGWADA
Trigger: GGCATCTGCCCACCCCACCCCTTGCCCTCTTGTTGCCTGCACTCATTTCCCAGGGACCCTCCTAGGATAGGACTGCCCTCCTTCCTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp TGCTCCAATGCCTACCCCAGCGAGGGCACAGAGGAAGCACCCAGGTaGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGC +
Preference number: 1 (lower is better)
Translates to: CSNAYPSEGTEEAPR*CQASGSCCQENPRS
Trigger: GCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGGTGCTTCCTCTGTGCCCTCGCTGGGGTAGGCATTGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp GGGTGCTTCCCGGCCTTTGGAAGCATGGAGGACTCCGCTGAACCCTaGACCCAACCTCAGCCAGTGGCTCTGCAGGGACTCTCCAGAGCA +
Preference number: 1 (lower is better)
Translates to: GCFPAFGSMEDSAEP*TQPQPVALQGLSRA
Trigger: TGCTCTGGAGAGTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCATGCTTCCAAAGGCCGGGAAGCACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp GCCTGCTGCCACACATTGCCCTTATTGCCACTGAGAGACCAGGCGTaGGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGTTG +
Preference number: 1 (lower is better)
Translates to: ACCHTLPLLPLRDQA*VSRAPLFRDRTRRL
Trigger: CAACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR CCA 90 bp TCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCACTTCTaGCTCCCTTCTGGCAAAGCCACCAGGCTGGAGTTCGGCCTTGAC +
Preference number: 1 (lower is better)
Translates to: SQSLTKGGAPCLPHF*LPSGKATRLEFGLD
Trigger: GTCAAGGCCGAACTCCAGCCTGGTGGCTTTGCCAGAAGGGAGCCAGAAGTGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp GAAGGCAGCCGTGCTGATTGGGCATCAGAAGGCCCCGCTGCATCCTaGCCCGGCCACCCACCAGCTGTTGGTGATAATGATCACACAGGC +
Preference number: 1 (lower is better)
Translates to: EGSRADWASEGPAAS*PGHPPAVGDNDHTG
Trigger: GCCTGTGTGATCATTATCACCAACAGCTGGTGGGTGGCCGGGCCAGGATGCAGCGGGGCCTTCTGATGCCCAATCAGCACGGCTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp TGCCTCCTGGCACTGCAGTGCTGCCCGAGTTCCAGGCCTCTTCTCTaGAGCTGTCCCCACCAAATGCTCCAGAAGGAGCCCTGTGATGCT +
Preference number: 1 (lower is better)
Translates to: CLLALQCCPSSRPLL*SCPHQMLQKEPCDA
Trigger: AGCATCACAGGGCTCCTTCTGGAGCATTTGGTGGGGACAGCTGCAGAGAAGAGGCCTGGAACTCGGGCAGCACTGCAGTGCCAGGAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTaGAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGCC +
Preference number: 1 (lower is better)
Translates to: WRTPLNPEPNLSQWL*RDSPEQRPWEYSPA
Trigger: GGCTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp AGGAAGGAGGGCAGTCCTATCCTAGGAGGGTCCCTGGGAAATGAGTaGAGGCAACAAGAGGGCAAGGGGTGGGGTGGGCAGATGCCATCC +
Preference number: 1 (lower is better)
Translates to: RKEGSPILGGSLGNE*RQQEGKGWGGQMPS
Trigger: GGATGGCATCTGCCCACCCCACCCCTTGCCCTCTTGTTGCCTGCACTCATTTCCCAGGGACCCTCCTAGGATAGGACTGCCCTCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp ACATTCTGGAAGGGCCCACTGGGGCTGATGGGCACATGGGCCTGCTaGCACACATTGCCCTTATTGCCACTGAGAGACCAGGCGTGCGTG +
Preference number: 1 (lower is better)
Translates to: TFWKGPLGLMGTWAC*HTLPLLPLRDQACV
Trigger: CACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCATCAGCCCCAGTGGGCCCTTCCAGAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR GCA 90 bp GTCACATTCTGGAAGGGCCCACTGGGGCTGATGGGCACATGGGCCTaGTGCCACACATTGCCCTTATTGCCACTGAGAGACCAGGCGTGC +
Preference number: 1 (lower is better)
Translates to: VTFWKGPLGLMGTWA*CHTLPLLPLRDQAC
Trigger: GCACGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCATCAGCCCCAGTGGGCCCTTCCAGAATGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR GCA 90 bp CAGGGATCCCTTTCACAGCTCCCAGAGAGTGAGGGGACTGGCACCTaGTCCCTCCACCAATCCCAGCTCTATAAGCCCCTCCTCCTTCAC +
Preference number: 1 (lower is better)
Translates to: QGSLSQLPESEGTGT*SLHQSQLYKPLLLH
Trigger: GTGAAGGAGGAGGGGCTTATAGAGCTGGGATTGGTGGAGGGAGCAGGTGCCAGTCCCCTCACTCTCTGGGAGCTGTGAAAGGGATCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp GCTGCCCGAGTTCCAGGCCTCTTCTCTGCAGCTGTCCCCACCAAATaGTCCAGAAGGAGCCCTGTGATGCTCCTCACCAAAGGTGCTTGC +
Preference number: 1 (lower is better)
Translates to: AARVPGLFSAAVPTK*SRRSPVMLLTKGAC
Trigger: GCAAGCACCTTTGGTGAGGAGCATCACAGGGCTCCTTCTGGAGCATTTGGTGGGGACAGCTGCAGAGAAGAGGCCTGGAACTCGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp CATCCCCACCGGCACCCTGGACACAGGACTGTTAGCCAAACTCCCTaGAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGT +
Preference number: 1 (lower is better)
Translates to: HPHRHPGHRTVSQTP*SCLAGDLRGSDKRC
Trigger: ACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTTGGCTAACAGTCCTGTGTCCAGGGTGCCGGTGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp ATAATCTGGAAGGGCCCACTGGGGCTGATGGGCACATGGGCCTGCTaGCACACATTGCCCTTATTGCCACTGAGAGACCAGGCGTGCGTG +
Preference number: 1 (lower is better)
Translates to: IIWKGPLGLMGTWAC*HTLPLLPLRDQACV
Trigger: CACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCATCAGCCCCAGTGGGCCCTTCCAGATTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR CCA 90 bp GGCACCCTGGACACAGGACTGTTAGCCAAACTCCCTGCAGTTGTTTaGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGACACCCCCA +
Preference number: 1 (lower is better)
Translates to: GTLDTGLLAKLPAVV*QETSGAVTSGVTPP
Trigger: TGGGGGTGTCACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTTGGCTAACAGTCCTGTGTCCAGGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp GAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATaGCGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCA +
Preference number: 1 (lower is better)
Translates to: EGWTQLGWSARAPPA*RSQSNSEDILGGSS
Trigger: TGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR GCA 90 bp AAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTaGGCCGAGGTCCCTGGGTTGGCGGATGCCATTCAGGCAAGTCCC +
Preference number: 1 (lower is better)
Translates to: KVRSTPRVQQGQGLC*AEVPGLADAIQASP
Trigger: GGGACTTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp GGCCTTGACTTAGGGGACAGGGTAAAGTCAGAAGCACACCACGAGTaGAGCAAGGACAAGGCCTATGTTGCGCCGAGGTCCCTGGGTTGG +
Preference number: 1 (lower is better)
Translates to: GLDLGDRVKSEAHHE*SKDKAYVAPRSLGW
Trigger: CCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCTGTCCCCTAAGTCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp CCCACTGCTTGTAGGGTGGAGTGGGGAAGTTATCAGTCTTCAGACTaGCCAGGCCCAAGACCCTGTGCTGGGTCCCTTCAAAGGGTGCAC +
Preference number: 1 (lower is better)
Translates to: PTACRVEWGSYQSSD*PGPRPCAGSLQRVH
Trigger: GTGCACCCTTTGAAGGGACCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTCCACCCTACAAGCAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp GGGCTTGGTCTTCAGGCTTCACTCAGCACCCTAGGAGCCTGTCTGTaGTCCCAAGGGCAGGATAGCCCAGCTGAGACTTCCATAAGCTGC +
Preference number: 1 (lower is better)
Translates to: GLGLQASLSTLGACL*SQGQDSPAETSISC
Trigger: GCAGCTTATGGAAGTCTCAGCTGGGCTATCCTGCCCTTGGGAGCACAGACAGGCTCCTAGGGTGCTGAGTGAAGCCTGAAGACCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp ACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGCCGAGGTCCCTaGGTTGGCGGATGCCATTCAGGCAAGTCCCCTGTCTTTGCAGTA +
Preference number: 1 (lower is better)
Translates to: TTSAARTRPMLRRGP*VGGCHSGKSPVFAV
Trigger: TACTGCAAAGACAGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp GAAGCATGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTaGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCC +
Preference number: 1 (lower is better)
Translates to: EAWRTPLNPEPNLSQ*LCRDSPEQRPWEYS
Trigger: GGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCATGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp ATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACTCAGCTaGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCA +
Preference number: 1 (lower is better)
Translates to: IFWCFGGDGWKAGLS*DGQPEPLQHDGLRA
Trigger: TGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR TCA 90 bp CTTCTGGCTCCCTTCTGGCAAAGCCACCAGGCTGGAGTTCGGCCTTaGCTTAGGGGACAGGGTAAAGTCAGAAGCACACCACGAGTGCAG +
Preference number: 1 (lower is better)
Translates to: LLAPFWQSHQAGVRP*LRGQGKVRSTPRVQ
Trigger: CTGCACTCGTGGTGTGCTTCTGACTTTACCCTGTCCCCTAAGTCAAGGCCGAACTCCAGCCTGGTGGCTTTGCCAGAAGGGAGCCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp GCAAGGACAAGGCCTATGTTGCGCCGAGGTCCCTGGGTTGGCGGATaGCATTCAGGCAAGTCCCCTGTCTTTGCAGTAAAGAAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: ARTRPMLRRGPWVGG*HSGKSPVFAVKKVL
Trigger: CAGCACCTTCTTTACTGCAAAGACAGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp CTCCACCATCCAGTGCTCACTCTGGACAGAATCGTGTGCAGCAGGTaGCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAGCT +
Preference number: 1 (lower is better)
Translates to: LHHPVLTLDRIVCSR*PTFLVSWTWDSHRA
Trigger: AGCTCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACACGATTCTGTCCAGAGTGAGCACTGGATGGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp AAAATAATCTGGAAGGGCCCACTGGGGCTGATGGGCACATGGGCCTaGTGCCACACATTGCCCTTATTGCCACTGAGAGACCAGGCGTGC +
Preference number: 1 (lower is better)
Translates to: KIIWKGPLGLMGTWA*CHTLPLLPLRDQAC
Trigger: GCACGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCATCAGCCCCAGTGGGCCCTTCCAGATTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR CCA 90 bp AGAATCGTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTaGGACAGTCACAGAGCTCGCAAAGTCCCACCTGTTCGTCCTCTG +
Preference number: 1 (lower is better)
Translates to: RIVCSRCPTFLVSWT*DSHRARKVPPVRPL
Trigger: CAGAGGACGAACAGGTGGGACTTTGCGAGCTCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACACGATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp CTGGACAGAATCGTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTaGACGTGGGACAGTCACAGAGCTCGCAAAGTCCCACCTGTTCGT +
Preference number: 1 (lower is better)
Translates to: LDRIVCSRCPTFLVS*TWDSHRARKVPPVR
Trigger: ACGAACAGGTGGGACTTTGCGAGCTCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACACGATTCTGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp TATGCTGAGAACCTGGAGCGACTCATTTCAGACAGAGGCCTTGACTaGGTCAGGAAGGCAGCCGTGCTGATTGGGCATCAGAAGGCCCCG +
Preference number: 1 (lower is better)
Translates to: YAENLERLISDRGLD*VRKAAVLIGHQKAP
Trigger: CGGGGCCTTCTGATGCCCAATCAGCACGGCTGCCTTCCTGACCCAGTCAAGGCCTCTGTCTGAAATGAGTCGCTCCAGGTTCTCAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp GCAAGGCCAGGAACCACTGATTACAGAATCCATTCCACCGGGCAATaGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACGAGCGG +
Preference number: 1 (lower is better)
Translates to: ARPGTTDYRIHSTGQ*SGFHTRLTCAGHER
Trigger: CCGCTCGTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTAATCAGTGGTTCCTGGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp GGGTGGGGTGGGCAGATGCCATCCCTCTGGACCTCGCCTGTACAATaGGGGCACCAGCTTAGATGCTCCCTAAGGTCCCTTCTAGTTATA +
Preference number: 1 (lower is better)
Translates to: GWGGQMPSLWTSPVQ*GHQLRCSLRSLLVI
Trigger: TATAACTAGAAGGGACCTTAGGGAGCATCTAAGCTGGTGCCCCCATTGTACAGGCGAGGTCCAGAGGGATGGCATCTGCCCACCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTaGGCTGAGATGGTGATTATGTGGGTGGCTGGGAGGATGGCGGGA +
Preference number: 1 (lower is better)
Translates to: SRAGRMHGDLEGHQS*AEMVIMWVAGRMAG
Trigger: TCCCGCCATCCTCCCAGCCACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp CTGTGCTCCCAAGGGCAGGATAGCCCAGCTGAGACTTCCATAAGCTaGTATACAGCACCTGGCCCCCGGAGTCCTTTTCACCAACCTGAA +
Preference number: 1 (lower is better)
Translates to: LCSQGQDSPAETSIS*YTAPGPRSPFHQPE
Trigger: TTCAGGTTGGTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGCTGGGCTATCCTGCCCTTGGGAGCACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp GAGTGCAGCAAGGACAAGGCCTATGTTGCGCCGAGGTCCCTGGGTTaGCGGATGCCATTCAGGCAAGTCCCCTGTCTTTGCAGTAAAGAA +
Preference number: 1 (lower is better)
Translates to: ECSKDKAYVAPRSLG*RMPFRQVPCLCSKE
Trigger: TTCTTTACTGCAAAGACAGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTGCTGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp GGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGGTGGAGTaGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGT +
Preference number: 1 (lower is better)
Translates to: GENRVLRSPTACRVE*GSYQSSDCPGPRPC
Trigger: ACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTCCACCCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp CAGCCAACATGTACTGAGCACCTTTACTGTCCACTCTATGGATCCTaGGGGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGG +
Preference number: 1 (lower is better)
Translates to: QPTCTEHLYCPLYGS*GEQGRQVSPVGAAR
Trigger: CCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCCCTCAGGATCCATAGAGTGGACAGTAAAGGTGCTCAGTACATGTTGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp ACACTCCACACATCACACACATTCTCAGACACACACGCACAGCACTaGCTCGATAGAGAGGCGGGTGCTTCCCGGCCTTTGGAAGCATGG +
Preference number: 1 (lower is better)
Translates to: TLHTSHTFSDTHAQH*LDREAGASRPLEAW
Trigger: CCATGCTTCCAAAGGCCGGGAAGCACCCGCCTCTCTATCGAGTCAGTGCTGTGCGTGTGTGTCTGAGAATGTGTGTGATGTGTGGAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp GAGGGCACAGAGGAAGCACCCAGGTGGTGCCAGGCCAGTGGTTCCTaGTGTCAGGAGAACCCAAGGAGCTTTTCAACATTTCTTGATGTC +
Preference number: 1 (lower is better)
Translates to: EGTEEAPRWCQASGS*CQENPRSFSTFLDV
Trigger: GACATCAAGAAATGTTGAAAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGGTGCTTCCTCTGTGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp AAACACACAGAGACCAGCACATGCCTAGACATTTACAGTGCCCACTaGCATACACTGACACCCACATCCCCCACCCACCTGCTGGCACAC +
Preference number: 1 (lower is better)
Translates to: KHTETSTCLDIYSAH*HTLTPTSPTHLLAH
Trigger: GTGTGCCAGCAGGTGGGTGGGGGATGTGGGTGTCAGTGTATGCCAGTGGGCACTGTAAATGTCTAGGCATGTGCTGGTCTCTGTGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp TCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCT +
Preference number: 1 (lower is better)
Translates to: SRTCGRRRRHSRTWR*HCRGDSLTLHGPPA
Trigger: AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
3UTR TCA 90 bp CCCGGTCTTTGGGGAAACCAAGAGGATGAGCACATGAGAACATGCTaGCCTTCACTCCTAGCCCAAGCTCTTGTGAAGTCACAGGGGAGA +
Preference number: 1 (lower is better)
Translates to: PGLWGNQEDEHMRTC*PSLLAQALVKSQGR
Trigger: TCTCCCCTGTGACTTCACAAGAGCTTGGGCTAGGAGTGAAGGTCAGCATGTTCTCATGTGCTCATCCTCTTGGTTTCCCCAAAGACCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp AACCCAAATGAACTGGTTGTCCTACCTGGGGAAGCCAAATGGAAATaGGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCA +
Preference number: 1 (lower is better)
Translates to: NPNELVVLPGEAKWK*EDSAGWWSPGHPLS
Trigger: TGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTCCCCAGGTAGGACAACCAGTTCATTTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
3UTR GCA 90 bp AACACACAAACACACAGAGACCAGCACATGCCTAGACATTTACAGTaGCCACTGGCATACACTGACACCCACATCCCCCACCCACCTGCT +
Preference number: 1 (lower is better)
Translates to: NTQTHRDQHMPRHLQ*PLAYTDTHIPHPPA
Trigger: AGCAGGTGGGTGGGGGATGTGGGTGTCAGTGTATGCCAGTGGGCACTGTAAATGTCTAGGCATGTGCTGGTCTCTGTGTGTTTGTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp AGGAACAATACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTaGAGCGACTCATTTCAGACAGAGGCCTTGACTGGGTCAGGAAGG +
Preference number: 1 (lower is better)
Translates to: RNNTRQTRWKCMLRT*SDSFQTEALTGSGR
Trigger: CCTTCCTGACCCAGTCAAGGCCTCTGTCTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGTATTGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp TCTTCTCTGCAGCTGTCCCCACCAAATGCTCCAGAAGGAGCCCTGTaGTGCTCCTCACCAAAGGTGCTTGCATTCAATAGGGTCATCTGT +
Preference number: 1 (lower is better)
Translates to: SSLQLSPPNAPEGAL*CSSPKVLAFNRVIC
Trigger: ACAGATGACCCTATTGAATGCAAGCACCTTTGGTGAGGAGCATCACAGGGCTCCTTCTGGAGCATTTGGTGGGGACAGCTGCAGAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp GATGTCAAGGAGGAAAGATCTAGATCCCATCATGTCAATCTCAGGTaGCTAACCCAGGACCCAAGGACAGGGATCCCTTTCACAGCTCCC +
Preference number: 1 (lower is better)
Translates to: DVKEERSRSHHVNLR*LTQDPRTGIPFTAP
Trigger: GGGAGCTGTGAAAGGGATCCCTGTCCTTGGGTCCTGGGTTAGGCACCTGAGATTGACATGATGGGATCTAGATCTTTCCTCCTTGACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp AAGCGTGTAGGAGGGATGGTAGGGTTGGGTGCCGAGAAGGGAAAATaGCATTTCAACCACCATACCAACTTTAGTCCTCCTCCTTTGCCC +
Preference number: 1 (lower is better)
Translates to: KRVGGMVGLGAEKGK*HFNHHTNFSPPPLP
Trigger: GGGCAAAGGAGGAGGACTAAAGTTGGTATGGTGGTTGAAATGCCATTTTCCCTTCTCGGCACCCAACCCTACCATCCCTCCTACACGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp TGTGTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCC +
Preference number: 1 (lower is better)
Translates to: CVSRTCGRRRRHSRT*RWHCRGDSLTLHGP
Trigger: GGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
3UTR TCA 90 bp AAAGGACTCTGGTGGTTCTATTCTGCAGGCAAGGCCAGGAACCACTaGTTACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACAC +
Preference number: 1 (lower is better)
Translates to: KGLWWFYSAGKARNH*LQNPFHRAMEWFPH
Trigger: GTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTAATCAGTGGTTCCTGGCCTTGCCTGCAGAATAGAACCACCAGAGTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp GAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATaGAGTCCAGACCCAGCCACGGGCAAAATGATCTGTGCAAATGGT +
Preference number: 1 (lower is better)
Translates to: ESWSSTLTYPRRSFL*SPDPATGKMICANG
Trigger: ACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR GCA 90 bp GGGTGGAGAAGGGAACTTTCAACTAGACAGTGCTTTTTGGCATTTTaGCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAG +
Preference number: 1 (lower is better)
Translates to: GWRRELSTRQCFLAF*PVHTLLSRAPFHAK
Trigger: CTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAGTTGAAAGTTCCCTTCTCCACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp AGTCTCACAGGCAGATATGTGAGATTGCACACACAGACCTGTGTTTaGACACACTCCTGCCCAACAATGTACCCACGGTGGTACCTAGAC +
Preference number: 1 (lower is better)
Translates to: SLTGRYVRLHTQTCV*THSCPTMYPRWYLD
Trigger: GTCTAGGTACCACCGTGGGTACATTGTTGGGCAGGAGTGTGTGCAAACACAGGTCTGTGTGTGCAATCTCACATATCTGCCTGTGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp TCTAGTTATAAGGGTCAAGGGATCCCCAGGAAAGAGTGGTCCTTCTaGCCCAACACACACACACACACACACAAACACACGCACACTCCA +
Preference number: 1 (lower is better)
Translates to: SSYKGQGIPRKEWSF*PNTHTHTHKHTHTP
Trigger: TGGAGTGTGCGTGTGTTTGTGTGTGTGTGTGTGTGTGTTGGGGCAGAAGGACCACTCTTTCCTGGGGATCCCTTGACCCTTATAACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp AAGGTCCCTTCTAGTTATAAGGGTCAAGGGATCCCCAGGAAAGAGTaGTCCTTCTGCCCCAACACACACACACACACACACAAACACACG +
Preference number: 1 (lower is better)
Translates to: KVPSSYKGQGIPRKE*SFCPNTHTHTHKHT
Trigger: CGTGTGTTTGTGTGTGTGTGTGTGTGTGTTGGGGCAGAAGGACCACTCTTTCCTGGGGATCCCTTGACCCTTATAACTAGAAGGGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp CTTATGAAGTCCAGACCCAGCCACGGGCAAAATGATCTGTGCAAATaGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCA +
Preference number: 1 (lower is better)
Translates to: LMKSRPSHGQNDLCK*FGSPSGCRIFYPTP
Trigger: TGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR TCA 90 bp CACCCTACAAGCGAACACATCACTCAGGAAGGTGGACACACACGCTaGCGTACACGGACATTCATAGAAACGAATGGGTCTCAATCCAGT +
Preference number: 1 (lower is better)
Translates to: HPTSEHITQEGGHTR*RTRTFIETNGSQSS
Trigger: ACTGGATTGAGACCCATTCGTTTCTATGAATGTCCGTGTACGTCAGCGTGTGTGTCCACCTTCCTGAGTGATGTGTTCGCTTGTAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp CCAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATaGTCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTT +
Preference number: 1 (lower is better)
Translates to: PEEASYEVQTQPRAK*SVQMVWEPQWMQNL
Trigger: AAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR TCA 90 bp GGTATAGCCACAGATCTTCTCATCCTCAAAGTGGCAGGTGTTGTCTaGAAGGTTCGGAGAGTTGATGGGCTCTGTGTAGTGGATGATGCG +
Preference number: 1 (lower is better)
Translates to: GIATDLLILKVAGVV*KVRRVDGLCVVDDA
Trigger: CGCATCATCCACTACACAGAGCCCATCAACTCTCCGAACCTTTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGTGGCTATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR GCA 90 bp CACCAAATGCTCCAGAAGGAGCCCTGTGATGCTCCTCACCAAAGGTaGTTGCATTCAATAGGGTCATCTGTAAGCTCTCCGTCATCCATA +
Preference number: 1 (lower is better)
Translates to: HQMLQKEPCDAPHQR*LHSIGSSVSSPSSI
Trigger: TATGGATGACGGAGAGCTTACAGATGACCCTATTGAATGCAAGCACCTTTGGTGAGGAGCATCACAGGGCTCCTTCTGGAGCATTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp CCATATCATGACATCCACACCCTTGATTTGGGGTCACTTTGCAAATaGTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCAC +
Preference number: 1 (lower is better)
Translates to: PYHDIHTLDLGSLCK*SSLPIPMTLASPSH
Trigger: GTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCATTTGCAAAGTGACCCCAAATCAAGGGTGTGGATGTCATGATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp AAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATGATCTGTaGAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCC +
Preference number: 1 (lower is better)
Translates to: KLLMKSRPSHGQNDL*KWFGSPSGCRIFYP
Trigger: GGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR CCA 90 bp TCTATTCAGCCAGCACCCTACAAGCGAACACATCACTCAGGAAGGTaGACACACACGCTGACGTACACGGACATTCATAGAAACGAATGG +
Preference number: 1 (lower is better)
Translates to: SIQPAPYKRTHHSGR*THTLTYTDIHRNEW
Trigger: CCATTCGTTTCTATGAATGTCCGTGTACGTCAGCGTGTGTGTCCACCTTCCTGAGTGATGTGTTCGCTTGTAGGGTGCTGGCTGAATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp CTGGTTCAGGAAAACCATCCCTGTTGCAACTCCTGTTTGGATTTCTaGGTGCCCATCCCCCTCACTGTGTTTGTCCTCACAATAATGCAC +
Preference number: 1 (lower is better)
Translates to: LVQENHPCCNSCLDF*VPIPLTVFVLTIMH
Trigger: GTGCATTATTGTGAGGACAAACACAGTGAGGGGGATGGGCACTCAGAAATCCAAACAGGAGTTGCAACAGGGATGGTTTTCCTGAACCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp TGTAGTCCATATCATGACATCCACACCCTTGATTTGGGGTCACTTTaGAAATGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCA +
Preference number: 1 (lower is better)
Translates to: CSPYHDIHTLDLGSL*KCSSLPIPMTLASP
Trigger: TGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCATTTGCAAAGTGACCCCAAATCAAGGGTGTGGATGTCATGATATGGACTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 90 bp AGGTGGACACACACGCTGACGTACACGGACATTCATAGAAACGAATaGGTCTCAATCCAGTCTCACAGGCAGATATGTGAGATTGCACAC +
Preference number: 1 (lower is better)
Translates to: RWTHTLTYTDIHRNE*VSIQSHRQICEIAH
Trigger: GTGTGCAATCTCACATATCTGCCTGTGAGACTGGATTGAGACCCATTCGTTTCTATGAATGTCCGTGTACGTCAGCGTGTGTGTCCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp TCTAAGTTTTTGGGCCCTGTTGGCCTTTGCATATTCTGTTCCCTCTaGTCAGAAGCCTCTCCCAATCCCAACAGGCTAACTCCAATCATT +
Preference number: 1 (lower is better)
Translates to: SKFLGPVGLCIFCSL*SEASPNPNRLTPII
Trigger: AATGATTGGAGTTAGCCTGTTGGGATTGGGAGAGGCTTCTGAGCAGAGGGAACAGAATATGCAAAGGCCAACAGGGCCCAAAAACTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 90 bp CACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATaGAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCT +
Preference number: 1 (lower is better)
Translates to: HGQNDLCKWFGSPSG*RIFYPTPFLFISSA
Trigger: AGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR TCA 90 bp ATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCTaGATGAACAAATGCACACAAGTTCACTGGGAGCAGACCAGGATG +
Preference number: 1 (lower is better)
Translates to: IKQGLPQRQCLVGIC*MNKCTQVHWEQTRM
Trigger: CATCCTGGTCTGCTCCCAGTGAACTTGTGTGCATTTGTTCATTCAGCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 90 bp AACATAGCCAGTGCTAAAATTAGGAAAGATGGGAGTAAACCCAAATaGACTGGTTGTCCTACCTGGGGAAGCCAAATGGAAATGAGAGGA +
Preference number: 1 (lower is better)
Translates to: NIASAKIRKDGSKPK*TGCPTWGSQMEMRG
Trigger: TCCTCTCATTTCCATTTGGCTTCCCCAGGTAGGACAACCAGTTCATTTGGGTTTACTCCCATCTTTCCTAATTTTAGCACTGGCTATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
3UTR-3UTR TCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAAGGGCCCACTGGGGCTaGTGGGCACATGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKRAHWG*WAHGPA
Trigger: AGCAGGCCCATGTGCCCATCAGCCCCAGTGGGCCCT...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR CAA 90 bp CATCAGAAGGCCCCGCTGCATCCTGGCCCGGCCACCCACCAGCTGTaGGTGATAATGATCACACAGGCCTGGCAGGGGGAGATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: HQKAPLHPGPATHQL*VIMITQAWQGEMGS
Trigger: GCTGCCCATCTCCCCCTGCCAGGCCTGTGTGATCATTATCACCAACAGCTGGTGGGTGGCCGGGCCAGGATGCAGCGGGGCCTTCTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp CCCTTATTGCCACTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCTGGGGAAGCC +
Preference number: 2 (lower is better)
Translates to: PLLPLRDQACVSRAP*FRDRTRRLREPGEA
Trigger: GGCTTCCCCAGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAGTGGCAATAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR-3UTR CCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCACCTGGGCACCCCAGCTaGCGGGGGTCAGTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: PISGVPESDQGRGSMSAPPGHPS*RGSVFG
Trigger: ACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCCCTCACCCCAGAAAATaGGCTGGCCACCGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASPHPRK*AGHRSP
Trigger: GGGGGAGCGGTGGCCAGCCCATTTTCTGGGGTGAGG...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACAGGAGTCCCAGAGTCTaGCCAAGGGAGGGGCTCCAT +
Preference number: 2 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDRSPRV*PREGLH
Trigger: ATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCT...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGACAGCTCCCAGAGAGTaGGGGGACTGGCACCTGCTC +
Preference number: 2 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQTAPRE*GDWHLL
Trigger: GAGCAGGTGCCAGTCCCCTCACTCTCTGGGAGCTGT...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGGCTGTCTGCACCCACTaGGACCTCCAGCAGCATCCC +
Preference number: 2 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEAVCTH*DLQQHP
Trigger: GGGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGC...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACGGACAAGGCCTATGTTaGGCCGAGGTCCCTGGGTTG +
Preference number: 2 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDGQGLC*AEVPGL
Trigger: CAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCC...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCCCCTCCTCCTTCACTaGCCCTGGGTGGAGAAGGGA +
Preference number: 2 (lower is better)
Translates to: QAILKAGLSAPTETSSSIPLLLH*PWVEKG
Trigger: TCCCTTCTCCACCCAGGGGCAGTGAAGGAGGAGGGG...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGGAAGCACCCAGGTGGTaGCAGGCCAGTGGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQEAPRW*QASGSC
Trigger: GCAGGAACCACTGGCCTGGCACCACCTGGGTGCTTC...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAATGATCACACAGGCCTaGCAGGGGGAGATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKMITQA*QGEMGS
Trigger: GCTGCCCATCTCCCCCTGCCAGGCCTGTGTGATCAT...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTGGCAGCCGTGCTGATTaGGCATCAGAAGGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: PRWCQASGSCCQENPRSFGSRAD*ASEGPA
Trigger: AGCGGGGCCTTCTGATGCCCAATCAGCACGGCTGCC...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCTGGATCCAGCCAGCCTaGTCTCCCCTGGCGGGGGTC +
Preference number: 2 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSWIQPA*SPLAGV
Trigger: GACCCCCGCCAGGGGAGACCAGGCTGGCTGGATCCA...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGGTGGTGGAGTCCTaGTCATCCACTCTCACCTAC +
Preference number: 2 (lower is better)
Translates to: LRDQACVSRAPLFRDRTRRVVES*SSTLTY
Trigger: GTAGGTGAGAGTGGATGACCAGGACTCCACCACCCT...CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR CAA 90 bp CGGCACCCTGGACACAGGACTGTTAGCCAAACTCCCTGCAGTTGTTaGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGACACCCCC +
Preference number: 2 (lower is better)
Translates to: RHPGHRTVSQTPCSC*AGDLRGSDKRCDTP
Trigger: GGGGGTGTCACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTTGGCTAACAGTCCTGTGTCCAGGGTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp CCCTTATTGCCACTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCGATGTGTTTC +
Preference number: 2 (lower is better)
Translates to: PLLPLRDQACVSRAP*FRDRTRRLREPMCF
Trigger: GAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAGTGGCAATAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR TCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGCTCACTCTGACAGCCTaGGCCAGGGGCTTTCCCAGA +
Preference number: 2 (lower is better)
Translates to: SARPIRDPPGLWGNQEDELTLTA*ARGFPR
Trigger: TCTGGGAAAGCCCCTGGCTCAGGCTGTCAGAGTGAG...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGTGCACGCCCCATCCGTaGCCCTCCCGGTCTTTGGGG +
Preference number: 2 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVCTPHP*PSRSLG
Trigger: CCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCA...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGGACCGGGATGGCCTTaGCCACCGCATTGTGCTGGT +
Preference number: 2 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTGPGWP*PPHCAG
Trigger: ACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR GCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGGAGATGGGCAGCCTTTaGCTCGGTTCCCCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEEMGSL*LGSPPA
Trigger: GGCAGGCGGGGAACCGAGGCAAAGGCTGCCCATCTC...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCGGAGCAGCCAGGGTTaGGGGGCAAATGGATTGGAA +
Preference number: 2 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDRSSQG*GANGLE
Trigger: TTCCAATCCATTTGCCCCGCAACCCTGGCTGCTCCG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCATCCCCCACCCACCTaGTGGCACACACAGACATCC +
Preference number: 2 (lower is better)
Translates to: PRWCQASGSCCQENPRSFHPPPT*WHTQTS
Trigger: GGATGTCTGTGTGTGCCAGCAGGTGGGTGGGGGATG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACTGTCTGCCCCACTTCTaGCTCCCTTCTGGCAAAGCC +
Preference number: 2 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDCLPHF*LPSGKA
Trigger: GGCTTTGCCAGAAGGGAGCCAGAAGTGGGGCAGACA...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGCAGGCTCACTTGTGCTaGGCACGAGCGGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEQAHLC*ARAGGG
Trigger: GCCACCTCCCGCTCGTGCCCAGCACAAGTGAGCCTG...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGATGGATCCAGCCAGCCTaGTCTCCCCTGGCGGGGGTC +
Preference number: 2 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRWIQPA*SPLAGV
Trigger: GACCCCCGCCAGGGGAGACCAGGCTGGCTGGATCCA...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGGAGCGTTTGGGGTTCTaGGTGAGGGCATTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRERLGF*VRAFCR
Trigger: GCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR GCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCAGCGGGACGTCTCTTCTaGCTTTCTCCAAGTCAAGCC +
Preference number: 2 (lower is better)
Translates to: PISGVPESDQGRGSMSAPAGRLF*LSPSQA
Trigger: GGCTTGACTTGGAGAAAGGCAGAAGAGACGTCCCGC...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCCTCCTGGCACTGCAGTaGTGCCCGAGTTCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: EDILGGSSGLPERTFQEALLALQ*CPSSRP
Trigger: AGGCCTGGAACTCGGGCAGCACTGCAGTGCCAGGAG...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCGCCACTGGGGAGATGTaGTGGATCCAGCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSATGEM*WIQPAW
Trigger: CCAGGCTGGCTGGATCCAGCACATCTCCCCAGTGGC...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGTTATTGGGATCCGTCTaGTTCCGGGGACACTCCCCC +
Preference number: 2 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQLLGSV*FRGHSP
Trigger: GGGGGAGTGTCCCCGGAAGCAGACGGATCCCAATAA...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR CCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGCCCAAGACCCTGTGCTaGGTCCCTTCAAAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRPKTLC*VPSKGA
Trigger: TGCACCCTTTGAAGGGACCCAGCACAGGGTCTTGGG...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAACTCCTTCACTGCCCCTaGGTGGAGAAGGGAACTTTC +
Preference number: 2 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKLLHCP*VEKGTF
Trigger: GAAAGTTCCCTTCTCCACCCAGGGGCAGTGAAGGAG...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCACCGGGCAATGGAGTaGTTTCCACACCAGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PRWCQASGSCCQENPRSFHRAME*FPHQAH
Trigger: GTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTAGGTGGGGGCTCAGGTaGTGTCAAGGAGGAAAGATC +
Preference number: 2 (lower is better)
Translates to: PRWCQASGSCCQENPRSFRWGLR*CQGGKI
Trigger: GATCTTTCCTCCTTGACATCACCTGAGCCCCCACCT...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTTTCTCTGCTCATCCTTaGAGCCAATGCAGGCCCCCT +
Preference number: 2 (lower is better)
Translates to: PRWCQASGSCCQENPRSFFSAHP*SQCRPP
Trigger: AGGGGGCCTGCATTGGCTGCAAGGATGAGCAGAGAA...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAGAGTGTGTGCGTGTGTaGAAGTGGAACAGCTGTCTC +
Preference number: 2 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKECVRV*KWNSCL
Trigger: GAGACAGCTGTTCCACTTGCACACACGCACACACTC...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGTCGTCCTCTGATCCCTaGCTCTCCCATCTCAGGAGT +
Preference number: 2 (lower is better)
Translates to: SARPIRDPPGLWGNQEDESSSDP*LSHLRS
Trigger: ACTCCTGAGATGGGAGAGGCAGGGATCAGAGGACGA...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCTGGACAGAATCGTGTaGAGCAGGTGCCCTACCTTC +
Preference number: 2 (lower is better)
Translates to: PRWCQASGSCCQENPRSFLDRIV*SRCPTF
Trigger: GAAGGTAGGGCACCTGCTGCACACGATTCTGTCCAG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACTGGGGGCCACATGTATaGAGTTCAGCTCAGCCAACA +
Preference number: 2 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDWGPHV*SSAQPT
Trigger: TGTTGGCTGAGCTGAACTGCATACATGTGGCCCCCA...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGATGGGCACATGGGCCTaGTGCCACACATTGCCCTTA +
Preference number: 2 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEMGTWA*CHTLPL
Trigger: TAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCAT...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR CCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTACCTGGGCACCCCAGCTaGCGGGGGTCAGTCTTTGGT +
Preference number: 2 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLPGHPS*RGSVFG
Trigger: ACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCAACCTTCCTTGTCTCCTaGACGTGGGACAGTCACAGA +
Preference number: 2 (lower is better)
Translates to: PISGVPESDQGRGSMSAPTFLVS*TWDSHR
Trigger: TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGT...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGCCTCACCCCAGAAAATaGGCTGGCCACCGCTCCCCC +
Preference number: 2 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQPHPRK*AGHRSP
Trigger: GGGGGAGCGGTGGCCAGCCCATTTTCTGGGGTGAGG...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTACAGGCTCACTTGTGCTaGGCACGAGCGGGAGGTGGC +
Preference number: 2 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLQAHLC*ARAGGG
Trigger: GCCACCTCCCGCTCGTGCCCAGCACAAGTGAGCCTG...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGGGCGGGGGTCACTCATaGGCCACCCATCAACACACA +
Preference number: 2 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVGGGHS*ATHQHT
Trigger: TGTGTGTTGATGGGTGGCCCATGAGTGACCCCCGCC...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTGAGCGTTTGGGGTTCTaGGTGAGGGCATTCTGCCGC +
Preference number: 2 (lower is better)
Translates to: AGWWSPGHPLSPTPEEASERLGF*VRAFCR
Trigger: GCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC...AGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR CAA 90 bp TGCTCACTCTGGACAGAATCGTGTGCAGCAGGTGCCCTACCTTCCTaGTCTCCTGGACGTGGGACAGTCACAGAGCTCGCAAAGTCCCAC +
Preference number: 2 (lower is better)
Translates to: CSLWTESCAAGALPS*SPGRGTVTELAKSH
Trigger: GTGGGACTTTGCGAGCTCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACACGATTCTGTCCAGAGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAGCTGGAGTTCGGCCTTaGCTTAGGGGACAGGGTAAA +
Preference number: 2 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRAGVRP*LRGQGK
Trigger: TTTACCCTGTCCCCTAAGTCAAGGCCGAACTCCAGC...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGGATTGGAAGGTCCTCTaGGGGAAGCAGGCACAGGGT +
Preference number: 2 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVDWKVL*GKQAQG
Trigger: ACCCTGTGCCTGCTTCCCTCAGAGGACCTTCCAATC...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGCACAAGTACACAGCCTaGGTGAGTGTGGGGCACACC +
Preference number: 2 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLHKYTA*VSVGHT
Trigger: GGTGTGCCCCACACTCACTCAGGCTGTGTACTTGTG...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
3UTR-3UTR TCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 2 (lower is better)
Translates to: RSKRPELKLQGIFNSACHVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR GCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCACAAGTCCCCTGTCTTTaGAGTAAAGAAGGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: PISGVPESDQGRGSMSAPQVPCL*SKEGAG
Trigger: GCCAGCACCTTCTTTACTGCAAAGACAGGGGACTTG...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCAGGTCCCTTCAAAGGGTaGACACTGAGGAGGGAAATA +
Preference number: 2 (lower is better)
Translates to: PISGVPESDQGRGSMSAPGPFKG*TLRREI
Trigger: TATTTCCCTCCTCAGTGTGCACCCTTTGAAGGGACC...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTATCAGTCTTCAGACTaGCCAGGCCCAAGACCCTGT +
Preference number: 2 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWYQSSD*PGPRPC
Trigger: ACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATA...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTGTTTGCACACACTCCTaGCCAACAATGTACCCACGG +
Preference number: 2 (lower is better)
Translates to: PRWCQASGSCCQENPRSFVCTHS*PTMYPR
Trigger: CCGTGGGTACATTGTTGGGCAGGAGTGTGTGCAAAC...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGGCTATTCATCTCTGGTaGTCCAATGCCTACCCCAGC +
Preference number: 2 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQAIHLW*SNAYPS
Trigger: GCTGGGGTAGGCATTGGAGCACCAGAGATGAATAGC...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR CCA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCCTTGTCTCCTGGACGTaGGACAGTCACAGAGCTCGC +
Preference number: 2 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGLVSWT*DSHRAR
Trigger: GCGAGCTCTGTGACTGTCCCACGTCCAGGAGACAAG...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCATCTGGGGTGACCTATaGTCTCCACCATCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: QAILKAGLSAPTETSSSIIWGDL*SPPSSA
Trigger: AGCACTGGATGGTGGAGACCATAGGTCACCCCAGAT...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCCAGGAGGAGGGGGCTTaGTCTTCAGGCTTCACTCAG +
Preference number: 2 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSQEEGA*SSGFTQ
Trigger: CTGAGTGAAGCCTGAAGACCAAGCCCCCTCCTCCTG...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCCTCCCTGCAGTTGTTTaGCAGGAGACCTCAGGGGCA +
Preference number: 2 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSLPAVV*QETSGA
Trigger: TGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAG...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGACTGCAGACACTGTGGTaGGAGGGTGGCCACCTCTGT +
Preference number: 2 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRLQTLW*EGGHLC
Trigger: ACAGAGGTGGCCACCCTCCCACCACAGTGTCTGCAG...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGACCCAACCTCAGCCAGTaGCTCTGCAGGGACTCTCCA +
Preference number: 2 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRPNLSQ*LCRDSP
Trigger: TGGAGAGTCCCTGCAGAGCCACTGGCTGAGGTTGGG...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGGTGCTTCCCGGCCTTTaGAAGCATGGAGGACTCCGC +
Preference number: 2 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVVLPGL*KHGGLR
Trigger: GCGGAGTCCTCCATGCTTCCAAAGGCCGGGAAGCAC...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTTGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKACHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR CCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKRHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR TCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGCTGGAGTTCGGCCTTaGCTTAGGGGACAGGGTAAA +
Preference number: 2 (lower is better)
Translates to: EDILGGSSGLPERTFQEAAGVRP*LRGQGK
Trigger: TTTACCCTGTCCCCTAAGTCAAGGCCGAACTCCAGC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGATGTCAGGCCCATCTCTaGGAGGTAGGGGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGCQAHL*EVGVEG
Trigger: TCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACA...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGTGTCAGGCCCATCTCTaGGAGGTAGGGGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVCQAHL*EVGVEG
Trigger: TCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACA...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCCTCAAACTAGCTGTGTaGCCTTGGGCCACTCCCCTT +
Preference number: 2 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSLKLAV*PWATPL
Trigger: AAGGGGAGTGGCCCAAGGTCACACAGCTAGTTTGAG...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGCTCAAACTAGCTGTGTaGCCTTGGGCCACTCCCCTT +
Preference number: 2 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAELKLAV*PWATPL
Trigger: AAGGGGAGTGGCCCAAGGTCACACAGCTAGTTTGAG...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGTCTGCAGCCTGGGATaGGAGGCCAGAATTTGGAGC +
Preference number: 2 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRVCSLG*EARIWS
Trigger: GCTCCAAATTCTGGCCTCTCATCCCAGGCTGCAGAC...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp GTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 2 (lower is better)
Translates to: VVEEGDTVELGAGIVEGTVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...AGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR GCA 90 bp TTGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCGATGTGTTTCCCGTACATGGAAGCACACCACGAGTaGAGCAAGGACAAGGCCTAT +
Preference number: 2 (lower is better)
Translates to: LFRDRTRRLREPMCFPYMEAHHE*SKDKAY
Trigger: ATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTC...CATGTACGGGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR GCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAAGGCCCAAGACCCTGTaGTGGGTCCCTTCAAAGGGT +
Preference number: 2 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGRPKTL*WVPSKG
Trigger: ACCCTTTGAAGGGACCCAGCACAGGGTCTTGGGCCT...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGAGGGGACTGGCACCTaGTCCCTCCACCAATCCCAG +
Preference number: 2 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCEGTGT*SLHQSQ
Trigger: CTGGGATTGGTGGAGGGAGCAGGTGCCAGTCCCCTC...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTCCTGCCTCCTGGCACTaGAGTGCTGCCCGAGTTCCA +
Preference number: 2 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCPASWH*SAARVP
Trigger: TGGAACTCGGGCAGCACTGCAGTGCCAGGAGGCAGG...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGCCGAGGTCCCTGGGTTaGCGGATGCCATTCAGGCAA +
Preference number: 2 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQPRSLG*RMPFRQ
Trigger: TTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGG...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAACCTTCCTTGTCTCCTaGACGTGGGACAGTCACAGA +
Preference number: 2 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRTFLVS*TWDSHR
Trigger: TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGT...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGACAATGTACCCACGGTaGTACCTAGACACAGACGGG +
Preference number: 2 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGTMYPR*YLDTDG
Trigger: CCCGTCTGTGTCTAGGTACCACCGTGGGTACATTGT...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGGGCAGCCGTGCTGATTaGGCATCAGAAGGCCCCGCT +
Preference number: 2 (lower is better)
Translates to: FSRHILSIPGQAILKAGLGSRAD*ASEGPA
Trigger: AGCGGGGCCTTCTGATGCCCAATCAGCACGGCTGCC...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCCTGCTATACAGCACCTaGCCCCCGGAGTCCTTTTCA +
Preference number: 2 (lower is better)
Translates to: EDILGGSSGLPERTFQEALLYST*PPESFS
Trigger: TGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAG...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGGCAGGAAGAATGCATaGAGACCTAGAGGGCCACCA +
Preference number: 2 (lower is better)
Translates to: EDILGGSSGLPERTFQEAGRKNA*RPRGPP
Trigger: TGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCAAGTAGATAAGAAATaGAGGCCCCTCTCCACTTCC +
Preference number: 2 (lower is better)
Translates to: PRWCQASGSCCQENPRSFQVDKK*RPLSTS
Trigger: GGAAGTGGAGAGGGGCCTTCATTTCTTATCTACTTG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTGGAAGGCAGCCGTGCTaGTTGGGCATCAGAAGGCCC +
Preference number: 2 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCGRQPC*LGIRRP
Trigger: GGGCCTTCTGATGCCCAATCAGCACGGCTGCCTTCC...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACTGCCCTTATTGCCACTaGGAGACCAGGCGTGCGTGT +
Preference number: 2 (lower is better)
Translates to: RSKRPELKLQGIFNSACHCPYCH*ETRRAC
Trigger: ACACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCA...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR GCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGACACAGACCTGTGTTTaGACACACTCCTGCCCAACA +
Preference number: 2 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGTQTCV*THSCPT
Trigger: TGTTGGGCAGGAGTGTGTGCAAACACAGGTCTGTGT...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAGCTGTCCCCACCAAATaGTCCAGAAGGAGCCCTGTG +
Preference number: 2 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLAVPTK*SRRSPV
Trigger: CACAGGGCTCCTTCTGGAGCATTTGGTGGGGACAGC...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGACAGAGACCAGCACATaGCTAGACATTTACAGTGCC +
Preference number: 2 (lower is better)
Translates to: SARPIRDPPGLWGNQEDETETST*LDIYSA
Trigger: GGCACTGTAAATGTCTAGGCATGTGCTGGTCTCTGT...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: VVEEGDTVELGAGIVEGTSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...AGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCACAATGTGGACACTTTaGTGTGCCGGGGGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: EDILGGSSGLPERTFQEATMWTL*CAGGKV
Trigger: AACCTTGCCCCCGGCACACCAAAGTGTCCACATTGT...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACGCGGGGGTCAGTCTTTaGTACAATGTGGACACTTTG +
Preference number: 2 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHAGVSL*YNVDTL
Trigger: CAAAGTGTCCACATTGTACCAAAGACTGACCCCCGC...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTCACCCATTCACACGTaGGGACCTCAGCATTTCAGC +
Preference number: 2 (lower is better)
Translates to: EDILGGSSGLPERTFQEASPIHT*GPQHFS
Trigger: GCTGAAATGCTGAGGTCCCCACGTGTGAATGGGTGA...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGATGGTGATTATGTaGGTGGCTGGGAGGATGGCG +
Preference number: 2 (lower is better)
Translates to: TVSEQLRGHPRWQFRASREMVIM*VAGRMA
Trigger: CGCCATCCTCCCAGCCACCCACATAATCACCATCTC...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGAGGGCCACCAGAGTTaGGCTGAGATGGTGATTATG +
Preference number: 2 (lower is better)
Translates to: EDILGGSSGLPERTFQEAEGHQS*AEMVIM
Trigger: CATAATCACCATCTCAGCCCAACTCTGGTGGCCCTC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATACCGCACCAGGAGGTTaGGGGAGCCGATGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYTAPGG*GSRCVS
Trigger: GGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGT...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR GCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATCCCTGGGTTGGCGGATaGCATTCAGGCAAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYPWVGG*HSGKSP
Trigger: AGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGG...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACGAAGCACACCACGAGTaGAGCAAGGACAAGGCCTAT +
Preference number: 2 (lower is better)
Translates to: AETSISCYTAPGPRSPFHEAHHE*SKDKAY
Trigger: ATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTC...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGATATCAGTCTTCAGACTaGCCAGGCCCAAGACCCTGT +
Preference number: 2 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRYQSSD*PGPRPC
Trigger: ACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATA...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGG +
Preference number: 2 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCMYSSS*PFSTRR
Trigger: CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACAT...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR CCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTAGGCACAGGGTGCCTTaGGAACCCCAAAGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCRHRVP*EPQRGS
Trigger: GCTCCCTCTTTGGGGTTCCCAAGGCACCCTGTGCCT...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGACCCTCAAAAATAATCTaGAAGGGCCCACTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGPSKII*KGPLGL
Trigger: CAGCCCCAGTGGGCCCTTCCAGATTATTTTTGAGGG...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR CAA 90 bp TCACCCATTCACACGTGGGGACCTCAGCATTTCAGCAGACACATTTaGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGTCTGCA +
Preference number: 2 (lower is better)
Translates to: SPIHTWGPQHFSRHI*SIPGQAILKAGLSA
Trigger: TGCAGACAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAAATGCTGAGGTCCCCACGTGTGAATGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACGATGGAAGTGTATGCTaGGAACCTGGAGCGACTCAT +
Preference number: 2 (lower is better)
Translates to: AETSISCYTAPGPRSPFHDGSVC*EPGATH
Trigger: ATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATC...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCAAGAGGATGAGCACATaGGAACATGCTGACCTTCAC +
Preference number: 2 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSKRMST*EHADLH
Trigger: GTGAAGGTCAGCATGTTCTCATGTGCTCATCCTCTT...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp TGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACAGGTGGTATAGGGTGTaGGGCGGACCTCATAGCTGT +
Preference number: 2 (lower is better)
Translates to: CGRRRRHSRTWRWHCRGDRWYRV*GGPHSC
Trigger: ACAGCTATGAGGTCCGCCTCACACCCTATACCACCT...GTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR GCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCCCTGCCTCCTGGCACTaGAGTGCTGCCCGAGTTCCA +
Preference number: 2 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICPASWH*SAARVP
Trigger: TGGAACTCGGGCAGCACTGCAGTGCCAGGAGGCAGG...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATGGGGGTCTCCTGTTGTaGTTTTACCTTGGTGGCGGG +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYGGLLL*FYLGGG
Trigger: CCCGCCACCAAGGTAAAAGCACAACAGGAGACCCCC...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTTGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 2 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR GCA 90 bp CTTCACCACCGATGTGTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: LHHRCVSRTCGRRRRHSRSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...TCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAACACATCGGTGGTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502298.1
3UTR-3UTR CCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACACAATGTGGACACTTTaGTGTGCCGGGGGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: RSKRPELKLQGIFNSACHTMWTL*CAGGKV
Trigger: AACCTTGCCCCCGGCACACCAAAGTGTCCACATTGT...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATCTTCTGGCTCCCTTCTaGCAAAGCCACCAGGCTGGA +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYLLAPF*QSHQAG
Trigger: TCCAGCCTGGTGGCTTTGCCAGAAGGGAGCCAGAAG...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATTGTCTGCCCCACTTCTaGCTCCCTTCTGGCAAAGCC +
Preference number: 2 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDCLPHF*LPSGKA
Trigger: GGCTTTGCCAGAAGGGAGCCAGAAGTGGGGCAGACA...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAATCCAGTGCTCACTCTaGACAGAATCGTGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGIQCSL*TESCAA
Trigger: TGCTGCACACGATTCTGTCCAGAGTGAGCACTGGAT...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAATCCAGTGCTCACTCTaGACAGAATCGTGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRIQCSL*TESCAA
Trigger: TGCTGCACACGATTCTGTCCAGAGTGAGCACTGGAT...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGACAATGTACCCACGGTaGTACCTAGACACAGACGGG +
Preference number: 2 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQTMYPR*YLDTDG
Trigger: CCCGTCTGTGTCTAGGTACCACCGTGGGTACATTGT...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp AATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 2 (lower is better)
Translates to: NGLGAPVDAESSIPLHSCCHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...ACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR-3UTR TCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATAGGTGGGGGCTCAGGTaGTGTCAAGGAGGAAAGATC +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYRWGLR*CQGGKI
Trigger: GATCTTTCCTCCTTGACATCACCTGAGCCCCCACCT...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAACAGAGACCAGCACATaGCTAGACATTTACAGTGCC +
Preference number: 2 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRTETST*LDIYSA
Trigger: GGCACTGTAAATGTCTAGGCATGTGCTGGTCTCTGT...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GGGTATAGCCACAGATCTTCTCATCCTCAAAGTGGCAGGTGTTGTCTGAAAGGTCAGGGCCTCAGTGCCTaGCCTCTGTCCTTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: GYSHRSSHPQSGRCCLKGQGLSA*PLSLFS
Trigger: AGAGAACAAGGACAGAGGCCAGGCACTGAGGCCCTG...ACCTTTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGTGGCTATACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR CCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATGGGGCTATTCATCTCTaGTGCTCCAATGCCTACCCC +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYGAIHL*CSNAYP
Trigger: GGGGTAGGCATTGGAGCACCAGAGATGAATAGCCCC...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGATTTACAGTGCCCACTaGCATACACTGACACCCACA +
Preference number: 2 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVIYSAH*HTLTPT
Trigger: TGTGGGTGTCAGTGTATGCCAGTGGGCACTGTAAAT...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp CAGTCTCACAGGCAGATATGTGAGATTGCACACACAGACCTGTGTTaGCACACACTCCTGCCCAACAATGTACCCACGGTGGTACCTAGA +
Preference number: 2 (lower is better)
Translates to: QSHRQICEIAHTDLC*HTLLPNNVPTVVPR
Trigger: TCTAGGTACCACCGTGGGTACATTGTTGGGCAGGAGTGTGTGCAAACACAGGTCTGTGTGTGCAATCTCACATATCTGCCTGTGAGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp CAAATGCTCCAGAAGGAGCCCTGTGATGCTCCTCACCAAAGGTGCTaGCATTCAATAGGGTCATCTGTAAGCTCTCCGTCATCCATAGGG +
Preference number: 2 (lower is better)
Translates to: QMLQKEPCDAPHQRC*HSIGSSVSSPSSIG
Trigger: CCCTATGGATGACGGAGAGCTTACAGATGACCCTATTGAATGCAAGCACCTTTGGTGAGGAGCATCACAGGGCTCCTTCTGGAGCATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAGAAGCACCCAGGTGGTaGCAGGCCAGTGGTTCCTGC +
Preference number: 2 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSEAPRW*QASGSC
Trigger: GCAGGAACCACTGGCCTGGCACCACCTGGGTGCTTC...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACATCCCCCACCCACCTaGTGGCACACACAGACATCC +
Preference number: 2 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPHPPPT*WHTQTS
Trigger: GGATGTCTGTGTGTGCCAGCAGGTGGGTGGGGGATG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGCCACTGCTTGTAGGGTaGAGTGGGGAAGTTATCAGT +
Preference number: 2 (lower is better)
Translates to: FSRHILSIPGQAILKAGLPLLVG*SGEVIS
Trigger: ACTGATAACTTCCCCACTCCACCCTACAAGCAGTGG...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTTTCACTGCCCCTGGGTaGAGAAGGGAACTTTCAACT +
Preference number: 2 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCFTAPG*RRELST
Trigger: AGTTGAAAGTTCCCTTCTCCACCCAGGGGCAGTGAA...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAGAGGAAGCACCCAGGTaGTGCCAGGCCAGTGGTTCC +
Preference number: 2 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSEEAPR*CQASGS
Trigger: GGAACCACTGGCCTGGCACCACCTGGGTGCTTCCTC...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCCGGCCTTTGGAAGCATaGAGGACTCCGCTGAACCCT +
Preference number: 2 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICRPLEA*RTPLNP
Trigger: AGGGTTCAGCGGAGTCCTCCATGCTTCCAAAGGCCG...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp GGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 2 (lower is better)
Translates to: GGVLVIHSHLPQKKLLMKRHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...CTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR-3UTR TCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATGGGAAACCAAGAGGATaGGCACATGAGAACATGCTG +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYGKPRG*AHENML
Trigger: CAGCATGTTCTCATGTGCTCATCCTCTTGGTTTCCC...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR TCA 90 bp ACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTGGGAGTAAACCCAAATaGACTGGTTGTCCTACCTGG +
Preference number: 2 (lower is better)
Translates to: TGKMICANGLGAPVDAESGSKPK*TGCPTW
Trigger: CCAGGTAGGACAACCAGTTCATTTGGGTTTACTCCC...AGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
3UTR-3UTR GCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTTCTGTCCTTGTTCTCTaGTCATCCTTGCAGCCAATG +
Preference number: 2 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCSVLVL*SSLQPM
Trigger: CATTGGCTGCAAGGATGAGCAGAGAACAAGGACAGA...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTTGGGGCAATGGACTCTaGACAGATGGGACAGTTAAG +
Preference number: 2 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCWGNGL*TDGTVK
Trigger: CTTAACTGTCCCATCTGTGCAGAGTCCATTGCCCCA...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCAAAGAGAAGAAAGGCTaGCCCCAGGGAGCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICKEKKG*PQGAER
Trigger: CCTCTCAGCTCCCTGGGGGCAGCCTTTCTTCTCTTT...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACAGGGCCTCAGTGCCTaGCCTCTGTCCTTGTTCTCT +
Preference number: 2 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPQGLSA*PLSLFS
Trigger: AGAGAACAAGGACAGAGGCCAGGCACTGAGGCCCTG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCCATTCTAGAAGGGGCTaGGCCTTCTCTCTCCCATGG +
Preference number: 2 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICHSRRG*AFSLPW
Trigger: CCATGGGAGAGAGAAGGCCCAGCCCCTTCTAGAATG...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATTCTGTCCTTGTTCTCTaGTCATCCTTGCAGCCAATG +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYSVLVL*SSLQPM
Trigger: CATTGGCTGCAAGGATGAGCAGAGAACAAGGACAGA...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCATCGTCCTCTGATCCCTaGCTCTCCCATCTCAGGAGT +
Preference number: 2 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPSSSDP*LSHLRS
Trigger: ACTCCTGAGATGGGAGAGGCAGGGATCAGAGGACGA...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAGACCCTCCCGGTCTTTaGGGAAACCAAGAGGATGAG +
Preference number: 2 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPDPPGL*GNQEDE
Trigger: CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTC...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp ATTTTATTATATCCCATGACGATGGGTCAGGAATTTGGACAGAGCTaGGCCGAGCAATTCAGGTGGCAGTTAGGCTGGTCTGGAAGGTCT +
Preference number: 2 (lower is better)
Translates to: ILLYPMTMGQEFGQS*AEQFRWQLGWSGRS
Trigger: AGACCTTCCAGACCAGCCTAACTGCCACCTGAATTGCTCGGCCAAGCTCTGTCCAAATTCCTGACCCATCGTCATGGGATATAATAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR GCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACTGGTGGTTCTATTCTaGAGGCAAGGCCAGGAACCA +
Preference number: 2 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPLVVLF*RQGQEP
Trigger: TGGTTCCTGGCCTTGCCTGCAGAATAGAACCACCAG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp GAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACATTCTATaGCACAAACAAGGCACTAAGAGCAACCCAGATTCAAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: ELKLQGIFNSACHIL*HKQGTKSNPDSRGR
Trigger: CCTTCCTCTTGAATCTGGGTTGCTCTTAGTGCCTTGTTTGTGCAATAGAATGTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp ATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTaGACCCATCACCCTAGCTGTGGAAACTTCTCCACGATGAGCCTT +
Preference number: 2 (lower is better)
Translates to: MQNLLSHSILVHQFS*THHPSCGNFSTMSL
Trigger: AAGGCTCATCGTGGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR-3UTR GCA 90 bp TATCTACATTTGCTTAAAGTCACTCCGTCTACCATTACGGCTGAGGAAAACAGTTGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 2 (lower is better)
Translates to: YLHLLKVTPSTITAEENSWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...ACTGTTTTCCTCAGCCGTAATGGTAGACGGAGTGACTTTAAGCAAATGTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR-3UTR CCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTATTCATTGTCTGATATaGGGGCACCAAATCACAGAA +
Preference number: 2 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCIHCLI*GHQITE
Trigger: TTCTGTGATTTGGTGCCCCCATATCAGACAATGAAT...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAGGGAGAGGGAGCCCTTaGTCTTGTAATCTGAGCTTC +
Preference number: 2 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSGRGSP*SCNLSF
Trigger: GAAGCTCAGATTACAAGACCAAGGGCTCCCTCTCCC...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAGCTTGTAGGGTGGAGTaGGGAAGTTATCAGTCTTCA +
Preference number: 2 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPACRVE*GSYQSS
Trigger: TGAAGACTGATAACTTCCCCACTCCACCCTACAAGC...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATATTCATTGTCTGATATaGGGGCACCAAATCACAGAA +
Preference number: 2 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYIHCLI*GHQITE
Trigger: TTCTGTGATTTGGTGCCCCCATATCAGACAATGAAT...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAATAGGGGATGAAAGGTaGAATTTCAGGCCATCGCAG +
Preference number: 2 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPIGDER*NFRPSQ
Trigger: CTGCGATGGCCTGAAATTCCACCTTTCATCCCCTAT...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp TTGGGGTCACTTTGCAAATGCTCATCACTGCCTATCCCCATGACCTaGGCAAGCCCATCTCACCTACAATATATGAGTAGATGTTTGAAA +
Preference number: 2 (lower is better)
Translates to: LGSLCKCSSLPIPMT*ASPSHLQYMSRCLK
Trigger: TTTCAAACATCTACTCATATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCATTTGCAAAGTGACCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 90 bp ACAGAAGCACCAGAAACTTCTGTAGATGATGATCCTAGAGCTACCTaGAATCCAAAATGCCCATCTGGTTCAGGAAAACCATCCCTGTTG +
Preference number: 2 (lower is better)
Translates to: TEAPETSVDDDPRAT*NPKCPSGSGKPSLL
Trigger: CAACAGGGATGGTTTTCCTGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGAAGTTTCTGGTGCTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCATGTATGCTGAGAACCTaGAGCGACTCATTTCAGACA +
Preference number: 2 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSCMLRT*SDSFQT
Trigger: TGTCTGAAATGAGTCGCTCCAGGTTCTCAGCATACA...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCATTCTCATCCTCAAAGTaGCAGGTGTTGTCTGAAAGG +
Preference number: 2 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSFSSSK*QVLSER
Trigger: CCTTTCAGACAACACCTGCCACTTTGAGGATGAGAA...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR GCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAGAAAACCATCCCTGTTaGAACTCCTGTTTGGATTTC +
Preference number: 2 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSENHPC*NSCLDF
Trigger: GAAATCCAAACAGGAGTTGCAACAGGGATGGTTTTC...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp AGTGCCTGGCCTCTGTCCTTGTTCTCTGCTCATCCTTaGAGCCAATGCAGGCCCCCTCCCTGGCGGGCCGGC +
Preference number: 3 (lower is better)
Translates to: SAWPLSLFSAHP*SQCRPPPWRAG
Trigger: GCCGGCCCGCCAGGGAGGGGGCCTGCATTGGCTGCAAGGATGAGCAGAGAACAAGGACAGAGGCCAGGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp GGCACACGGAGATCGGTCAGGATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGGACCGGGATGGCCTTG +
Preference number: 3 (lower is better)
Translates to: GTRRSVRMYSSS*PFSTRRTGMAL
Trigger: CAAGGCCATCCCGGTCCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACATCCTGACCGATCTCCGTGTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR TCA 72 bp ACAGAGGCCTTGACTGGGTCAGGAAGGCAGCCGTGCTaGTTGGGCATCAGAAGGCCCCGCTGCATCCTGGCC +
Preference number: 3 (lower is better)
Translates to: TEALTGSGRQPC*LGIRRPRCILA
Trigger: GGCCAGGATGCAGCGGGGCCTTCTGATGCCCAATCAGCACGGCTGCCTTCCTGACCCAGTCAAGGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp CCCACAGCTGTGGGCTGGACTGGCAGGGGGCTCCACTaGCCGGCATCACCACCACTTTATTGGGATCCGTCT +
Preference number: 3 (lower is better)
Translates to: PTAVGWTGRGLH*PASPPLYWDPS
Trigger: AGACGGATCCCAATAAAGTGGTGGTGATGCCGGGCAGTGGAGCCCCCTGCCAGTCCAGCCCACAGCTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR CCA 72 bp GAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTaGGTGGCTGGGAGGATGGCGGGAGGGGGCCAGGAA +
Preference number: 3 (lower is better)
Translates to: EGHQSWAEMVIM*VAGRMAGGGQE
Trigger: TTCCTGGCCCCCTCCCGCCATCCTCCCAGCCACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEGDSLT*HGPPAP
Trigger: GGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCC...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR CAA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAGTTCTCTGCTCATCCTaGCAGCCAATGCAGGCCCCC +
Preference number: 3 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKVLCSS*QPMQAP
Trigger: GGGGGCCTGCATTGGCTGCAAGGATGAGCAGAGAAC...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp CCGGCCTTTGGAAGCATGGAGGACTCCGCTGAACCCTaGACCCAACCTCAGCCAGTGGCTCTGCAGGGACTC +
Preference number: 3 (lower is better)
Translates to: PAFGSMEDSAEP*TQPQPVALQGL
Trigger: GAGTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCATGCTTCCAAAGGCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp GGAGGGCAGTCCTATCCTAGGAGGGTCCCTGGGAAATaGGTGCAGGCAACAAGAGGGCAAGGGGTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: GGQSYPRRVPGK*VQATRGQGVGW
Trigger: CCACCCCACCCCTTGCCCTCTTGTTGCCTGCACTCATTTCCCAGGGACCCTCCTAGGATAGGACTGCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp GCAGCAAGGACAAGGCCTATGTTGCGCCGAGGTCCCTaGGTTGGCGGATGCCATTCAGGCAAGTCCCCTGTC +
Preference number: 3 (lower is better)
Translates to: AARTRPMLRRGP*VGGCHSGKSPV
Trigger: GACAGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp CAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTaGGAATACTCCCCAGCCCCTCAAGCTGCCCAGCGA +
Preference number: 3 (lower is better)
Translates to: QWLCRDSPEQRP*EYSPAPQAAQR
Trigger: TCGCTGGGCAGCTTGAGGGGCTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp CTGGGAAATGAGTGCAGGCAACAAGAGGGCAAGGGGTaGGGTGGGCAGATGCCATCCCTCTGGACCTCGCCT +
Preference number: 3 (lower is better)
Translates to: LGNECRQQEGKG*GGQMPSLWTSP
Trigger: AGGCGAGGTCCAGAGGGATGGCATCTGCCCACCCCACCCCTTGCCCTCTTGTTGCCTGCACTCATTTCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp CTCCTGTTGTGCTTTTACCTTGGTGGCGGGGTGGGCTaGGGTGGTCAGACATGTGGGCCTGGGCATGAGGAG +
Preference number: 3 (lower is better)
Translates to: LLLCFYLGGGVG*GGQTCGPGHEE
Trigger: CTCCTCATGCCCAGGCCCACATGTCTGACCACCCCAGCCCACCCCGCCACCAAGGTAAAAGCACAACAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGGCCGAGGTCCCTGGGTaGGCGGATGCCATTCAGGCA +
Preference number: 3 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWAEVPG*ADAIQA
Trigger: TGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGC...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: TWRWHCRGDSLTLHGPPAVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR CAA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWGDSLT*HGPPAP
Trigger: GGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCC...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR CAA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCACGGACCGGGATGGCCTaGACCACCGCATTGTGCTGG +
Preference number: 3 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPRTGMA*TTALCW
Trigger: CCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCG...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR TCA 72 bp GTGCTTCCCGGCCTTTGGAAGCATGGAGGACTCCGCTaGACCCTGAACCCAACCTCAGCCAGTGGCTCTGCA +
Preference number: 3 (lower is better)
Translates to: VLPGLWKHGGLR*TLNPTSASGSA
Trigger: TGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCATGCTTCCAAAGGCCGGGAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp AGGCCATGTCACCAGCCCCGAAGGTGGTATAGGGTGTaGGGCGGACCTCATAGCTGTGGGGCACACGGAGAT +
Preference number: 3 (lower is better)
Translates to: RPCHQPRRWYRV*GGPHSCGAHGD
Trigger: ATCTCCGTGTGCCCCACAGCTATGAGGTCCGCCTCACACCCTATACCACCTTCGGGGCTGGTGACATGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR GCA 72 bp AGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTaGGCCGAGGTCCCTGGGTTGGCGGATGCCATTCAG +
Preference number: 3 (lower is better)
Translates to: STPRVQQGQGLC*AEVPGLADAIQ
Trigger: CTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp GGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATaGCTACCCCAGCGAGGGCACAGAGGAAGCACCCAG +
Preference number: 3 (lower is better)
Translates to: GSTWGYSSLVLQ*LPQRGHRGSTQ
Trigger: CTGGGTGCTTCCTCTGTGCCCTCGCTGGGGTAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp CGTGCTGATTGGGCATCAGAAGGCCCCGCTGCATCCTaGCCCGGCCACCCACCAGCTGTTGGTGATAATGAT +
Preference number: 3 (lower is better)
Translates to: RADWASEGPAAS*PGHPPAVGDND
Trigger: ATCATTATCACCAACAGCTGGTGGGTGGCCGGGCCAGGATGCAGCGGGGCCTTCTGATGCCCAATCAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp AGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTaGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGG +
Preference number: 3 (lower is better)
Translates to: RTPLNPEPNLSQ*LCRDSPEQRPW
Trigger: CCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp GATAGAGAGGCGGGTGCTTCCCGGCCTTTGGAAGCATaGAGGACTCCGCTGAACCCTGAACCCAACCTCAGC +
Preference number: 3 (lower is better)
Translates to: DREAGASRPLEA*RTPLNPEPNLS
Trigger: GCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCATGCTTCCAAAGGCCGGGAAGCACCCGCCTCTCTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp CACGGTCCCCCAGCTCCCGAGGCCTCGATGTCTCGATaGACATGTAGTAGCCCTCAGGGGTGCCACTTATGT +
Preference number: 3 (lower is better)
Translates to: HGPPAPEASMSR*TCSSPQGCHLC
Trigger: ACATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGGGAGCTGGGGGACCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
3UTR TCA 72 bp CATGGGCCTGCTGCCACACATTGCCCTTATTGCCACTaGGAGACCAGGCGTGCGTGTCCAGAGCCCCTTTGT +
Preference number: 3 (lower is better)
Translates to: HGPAATHCPYCH*ETRRACPEPLC
Trigger: ACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGCCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR GCA 72 bp AGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTaGGGGGCAAATGGATTGGAAGGTCCTCTGAGGGAA +
Preference number: 3 (lower is better)
Translates to: RETSLPCRSSQG*GANGLEGPLRE
Trigger: TTCCCTCAGAGGACCTTCCAATCCATTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp TTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTGTCTGTCAGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: LGERLGFWVRAF*RVQSKLSVRSW
Trigger: CCAGGACCTGACAGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR CCA 72 bp AAGGACAAGGCCTATGTTGCGCCGAGGTCCCTGGGTTaGCGGATGCCATTCAGGCAAGTCCCCTGTCTTTGC +
Preference number: 3 (lower is better)
Translates to: KDKAYVAPRSLG*RMPFRQVPCLC
Trigger: GCAAAGACAGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp GGGCAGATGCCATCCCTCTGGACCTCGCCTGTACAATaGGGGCACCAGCTTAGATGCTCCCTAAGGTCCCTT +
Preference number: 3 (lower is better)
Translates to: GQMPSLWTSPVQ*GHQLRCSLRSL
Trigger: AAGGGACCTTAGGGAGCATCTAAGCTGGTGCCCCCATTGTACAGGCGAGGTCCAGAGGGATGGCATCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAGGCGGGGGTCAGTCTTaGGTACAATGTGGACACTTT +
Preference number: 3 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKGGGQS*VQCGHF
Trigger: AAAGTGTCCACATTGTACCAAAGACTGACCCCCGCC...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGTGCGGGGCAAATGGATaGGAAGGTCCTCTGAGGGAA +
Preference number: 3 (lower is better)
Translates to: SARPIRDPPGLWGNQEDECGANG*EGPLRE
Trigger: TTCCCTCAGAGGACCTTCCAATCCATTTGCCCCGCA...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR CAA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGCCATCGCAGGCAGCTaGAGACTACAGAACAGGGCT +
Preference number: 3 (lower is better)
Translates to: EDILGGSSGLPERTFQEAAIAGS*RLQNRA
Trigger: AGCCCTGTTCTGTAGTCTCAAGCTGCCTGCGATGGC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACGAGGGGATCAAACTTTaGAGGTCCATCCTCACTCTG +
Preference number: 3 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDEGIKL*RSILTL
Trigger: CAGAGTGAGGATGGACCTCAAAAGTTTGATCCCCTC...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCATGAGAGGCCAGAATTaGGAGCCGAGGGCAGGATCC +
Preference number: 3 (lower is better)
Translates to: EDILGGSSGLPERTFQEAMRGQN*EPRAGS
Trigger: GGATCCTGCCCTCGGCTCCAAATTCTGGCCTCTCAT...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 3 (lower is better)
Translates to: RSKRPELKLQGIFNSACHVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
3UTR TCA 72 bp GCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTaGCCTTGGGCCACTCCCCTTCCCCACTCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: ALPRLALLKLAV*PWATPLPHSGL
Trigger: AAGCCCAGAGTGGGGAAGGGGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp ACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATaGCGGTCTCAGAGCAACTCAGAGGACATCCTAGGT +
Preference number: 3 (lower is better)
Translates to: TQLGWSARAPPA*RSQSNSEDILG
Trigger: ACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR GCA 72 bp AGGCCTATGTTGCGCCGAGGTCCCTGGGTTGGCGGATaGCATTCAGGCAAGTCCCCTGTCTTTGCAGTAAAG +
Preference number: 3 (lower is better)
Translates to: RPMLRRGPWVGG*HSGKSPVFAVK
Trigger: CTTTACTGCAAAGACAGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp CCAGTGCTCACTCTGGACAGAATCGTGTGCAGCAGGTaGCCTACCTTCCTTGTCTCCTGGACGTGGGACAGT +
Preference number: 3 (lower is better)
Translates to: PVLTLDRIVCSR*PTFLVSWTWDS
Trigger: ACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACACGATTCTGTCCAGAGTGAGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp CCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTaGTCCAATGCCTACCCCAGCGAGGGCACAGAGGAA +
Preference number: 3 (lower is better)
Translates to: PKEGALGAIHLW*SNAYPSEGTEE
Trigger: TTCCTCTGTGCCCTCGCTGGGGTAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp ATCGTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTaGACGTGGGACAGTCACAGAGCTCGCAAAGTCCCA +
Preference number: 3 (lower is better)
Translates to: IVCSRCPTFLVS*TWDSHRARKVP
Trigger: TGGGACTTTGCGAGCTCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACACGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp CACAGGGTGCCTTGGGAACCCCAAAGAGGGAGCACTTaGGGCTATTCATCTCTGGTGCTCCAATGCCTACCC +
Preference number: 3 (lower is better)
Translates to: HRVPWEPQRGST*GYSSLVLQCLP
Trigger: GGGTAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTCCCAAGGCACCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp TATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTaGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCA +
Preference number: 3 (lower is better)
Translates to: YLLVLWWRWLEG*TQLGWSARAPP
Trigger: TGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR CCA 72 bp GCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATaGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCC +
Preference number: 3 (lower is better)
Translates to: AALPYLLVLWWR*LEGWTQLGWSA
Trigger: GGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR CCA 72 bp GAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTaGAGATGGCTGGAAGGCTGGACTCAGCTGGGATGG +
Preference number: 3 (lower is better)
Translates to: EAAALPYLLVLW*RWLEGWTQLGW
Trigger: CCATCCCAGCTGAGTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR CAA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGCACACAGACCTGTGTTaGCACACACTCCTGCCCAAC +
Preference number: 3 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEHTDLC*HTLLPN
Trigger: GTTGGGCAGGAGTGTGTGCAAACACAGGTCTGTGTG...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp CCCTTCTGGCAAAGCCACCAGGCTGGAGTTCGGCCTTaGCTTAGGGGACAGGGTAAAGTCAGAAGCACACCA +
Preference number: 3 (lower is better)
Translates to: PFWQSHQAGVRP*LRGQGKVRSTP
Trigger: TGGTGTGCTTCTGACTTTACCCTGTCCCCTAAGTCAAGGCCGAACTCCAGCCTGGTGGCTTTGCCAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp TTAGGGGACAGGGTAAAGTCAGAAGCACACCACGAGTaGAGCAAGGACAAGGCCTATGTTGCGCCGAGGTCC +
Preference number: 3 (lower is better)
Translates to: LGDRVKSEAHHE*SKDKAYVAPRS
Trigger: GGACCTCGGCGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCTGTCCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp TGTAGGGTGGAGTGGGGAAGTTATCAGTCTTCAGACTaGCCAGGCCCAAGACCCTGTGCTGGGTCCCTTCAA +
Preference number: 3 (lower is better)
Translates to: CRVEWGSYQSSD*PGPRPCAGSLQ
Trigger: TTGAAGGGACCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTCCACCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp CAAGGGCAGGATAGCCCAGCTGAGACTTCCATAAGCTaGTATACAGCACCTGGCCCCCGGAGTCCTTTTCAC +
Preference number: 3 (lower is better)
Translates to: QGQDSPAETSIS*YTAPGPRSPFH
Trigger: GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGCTGGGCTATCCTGCCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp CGTGTTCTCAGGAGTCCCACTGCTTGTAGGGTGGAGTaGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: RVLRSPTACRVE*GSYQSSDCPGP
Trigger: TGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTCCACCCTACAAGCAGTGGGACTCCTGAGAACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp ATGCACGCATGCCTAAAGAGTCATTCTAGAAGGGGCTaGGCCTTCTCTCTCCCATGGATGGCTAGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: MHACLKSHSRRG*AFSLPWMARWG
Trigger: CCCCCACCTAGCCATCCATGGGAGAGAGAAGGCCCAGCCCCTTCTAGAATGACTCTTTAGGCATGCGTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp AACCTGGAGCGACTCATTTCAGACAGAGGCCTTGACTaGGTCAGGAAGGCAGCCGTGCTGATTGGGCATCAG +
Preference number: 3 (lower is better)
Translates to: NLERLISDRGLD*VRKAAVLIGHQ
Trigger: CTGATGCCCAATCAGCACGGCTGCCTTCCTGACCCAGTCAAGGCCTCTGTCTGAAATGAGTCGCTCCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp GATTCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTaGGGAAACCAAGAGGATGAGCACATGAGAACATGC +
Preference number: 3 (lower is better)
Translates to: DSARPIRDPPGL*GNQEDEHMRTC
Trigger: GCATGTTCTCATGTGCTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp GGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTaGGCTGAGATGGTGATTATGTGGGTGGCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: GRMHGDLEGHQS*AEMVIMWVAGR
Trigger: CCTCCCAGCCACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp CTGGAAGGTCTGAGGCAGCTGCACTCCCATATCTTCTaGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACTC +
Preference number: 3 (lower is better)
Translates to: LEGLRQLHSHIF*CFGGDGWKAGL
Trigger: GAGTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR CAA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAACTAGACAGTGCTTTTaGGCATTTTGCCCTGTACAC +
Preference number: 3 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKTRQCF*AFCPVH
Trigger: GTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAGT...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGACACACATTGCCCTTATaGCCACTGAGAGACCAGGCG +
Preference number: 3 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGHTLPL*PLRDQA
Trigger: CGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTG...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR TCA 72 bp GAACTGGTTGTCCTACCTGGGGAAGCCAAATGGAAATaGGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCAT +
Preference number: 3 (lower is better)
Translates to: ELVVLPGEAKWK*EDSAGWWSPGH
Trigger: ATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTCCCCAGGTAGGACAACCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
3UTR GCA 72 bp TATCTCTGTGTGTGTGAGCATGAGTGTGTGCGTGTGTaGAAGTGGAACAGCTGTCTCCAGGGCCTCAGTGCC +
Preference number: 3 (lower is better)
Translates to: YLCVCEHECVRV*KWNSCLQGLSA
Trigger: GGCACTGAGGCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACACACAGAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp GAGGAAGCACCCAGGTGGTGCCAGGCCAGTGGTTCCTaGTGTCAGGAGAACCCAAGGAGCTTTTCAACATTT +
Preference number: 3 (lower is better)
Translates to: EEAPRWCQASGS*CQENPRSFSTF
Trigger: AAATGTTGAAAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGGTGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTaGAGCGACTCATTTCAGACAGAGGCCTTGACTGGG +
Preference number: 3 (lower is better)
Translates to: TRQTRWKCMLRT*SDSFQTEALTG
Trigger: CCCAGTCAAGGCCTCTGTCTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp ATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTaGTCATCCACTCTCACCTACCCCAGAAGAAGCTTC +
Preference number: 3 (lower is better)
Translates to: MEMRGLGRVVES*SSTLTYPRRSF
Trigger: GAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR-3UTR CAA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACTACAATGTGGACACTTaGGTGTGCCGGGGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: RSKRPELKLQGIFNSACHYNVDT*VCRGQG
Trigger: ACCTTGCCCCCGGCACACCAAAGTGTCCACATTGTA...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGCCACTTCCAAATTCATaGTCTGATATGGGGGCACCA +
Preference number: 3 (lower is better)
Translates to: WGLRLGENRVLRSPTACRPLPNS*SDMGAP
Trigger: TGGTGCCCCCATATCAGACAATGAATTTGGAAGTGG...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAGCCACCCACCAGCTGTaGGTGATAATGATCACACAG +
Preference number: 3 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGATHQL*VIMITQ
Trigger: CTGTGTGATCATTATCACCAACAGCTGGTGGGTGGC...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp CAGCTGTCCCCACCAAATGCTCCAGAAGGAGCCCTGTaGTGCTCCTCACCAAAGGTGCTTGCATTCAATAGG +
Preference number: 3 (lower is better)
Translates to: QLSPPNAPEGAL*CSSPKVLAFNR
Trigger: CCTATTGAATGCAAGCACCTTTGGTGAGGAGCATCACAGGGCTCCTTCTGGAGCATTTGGTGGGGACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp AAGGGTCAAGGGATCCCCAGGAAAGAGTGGTCCTTCTaGCCCAACACACACACACACACACACAAACACACG +
Preference number: 3 (lower is better)
Translates to: KGQGIPRKEWSF*PNTHTHTHKHT
Trigger: CGTGTGTTTGTGTGTGTGTGTGTGTGTGTTGGGGCAGAAGGACCACTCTTTCCTGGGGATCCCTTGACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp AGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGGTaGAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAG +
Preference number: 3 (lower is better)
Translates to: RTVFSGVPLLVG*SGEVISLQTAQ
Trigger: CTGGGCAGTCTGAAGACTGATAACTTCCCCACTCCACCCTACAAGCAGTGGGACTCCTGAGAACACGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCATGACATCCACACCCTaGATTTGGGGTCACTTTGCA +
Preference number: 3 (lower is better)
Translates to: EDILGGSSGLPERTFQEAMTSTP*IWGHFA
Trigger: TGCAAAGTGACCCCAAATCAAGGGTGTGGATGTCAT...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp AGGGTCATCTGTAAGCTCTCCGTCATCCATAGGGGATaGAAGGTGGAATTTCAGGCCATCGCAGGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: RVICKLSVIHRG*KVEFQAIAGSL
Trigger: CAAGCTGCCTGCGATGGCCTGAAATTCCACCTTTCATCCCCTATGGATGACGGAGAGCTTACAGATGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp GGAACAATACCCGACAGACGCGATGGAAGTGTATGCTaGGAACCTGGAGCGACTCATTTCAGACAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: GTIPDRRDGSVC*EPGATHFRQRP
Trigger: AGGCCTCTGTCTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGTATTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp TGTACTGAGCACCTTTACTGTCCACTCTATGGATCCTaGGGGGAACAAGGGAGACAAGTCTCCCCTGTCGGA +
Preference number: 3 (lower is better)
Translates to: CTEHLYCPLYGS*GEQGRQVSPVG
Trigger: TCCGACAGGGGAGACTTGTCTCCCTTGTTCCCCTCAGGATCCATAGAGTGGACAGTAAAGGTGCTCAGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp ACACCATGGCGCACAAAGACACAGCATGAGCAACACTaGTACAGAGATGCTGGCTCACAGGCACACACAGAC +
Preference number: 3 (lower is better)
Translates to: TPWRTKTQHEQH*YRDAGSQAHTD
Trigger: GTCTGTGTGTGCCTGTGAGCCAGCATCTCTGTATCAGTGTTGCTCATGCTGTGTCTTTGTGCGCCATGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp AGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTaGGCTGAAGCTCCAAGGCATCTTCAACTCAGCATG +
Preference number: 3 (lower is better)
Translates to: SSGLPERTFQEA*AEAPRHLQLSM
Trigger: CATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR TCA 72 bp GCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATaGTCTGTGCAAATGGTTTGGGAGCCCCAGTGGATG +
Preference number: 3 (lower is better)
Translates to: ASYEVQTQPRAK*SVQMVWEPQWM
Trigger: CATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR GCA 72 bp GGTTGGCGGATGCCATTCAGGCAAGTCCCCTGTCTTTaGAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAAC +
Preference number: 3 (lower is better)
Translates to: GWRMPFRQVPCL*SKEGAGRSDRN
Trigger: GTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACAGGGGACTTGCCTGAATGGCATCCGCCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp CTCCAGAAGGAGCCCTGTGATGCTCCTCACCAAAGGTaGTTGCATTCAATAGGGTCATCTGTAAGCTCTCCG +
Preference number: 3 (lower is better)
Translates to: LQKEPCDAPHQR*LHSIGSSVSSP
Trigger: CGGAGAGCTTACAGATGACCCTATTGAATGCAAGCACCTTTGGTGAGGAGCATCACAGGGCTCCTTCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp TTGGGCCCTGTTGGCCTTTGCATATTCTGTTCCCTCTaGTCAGAAGCCTCTCCCAATCCCAACAGGCTAACT +
Preference number: 3 (lower is better)
Translates to: LGPVGLCIFCSL*SEASPNPNRLT
Trigger: AGTTAGCCTGTTGGGATTGGGAGAGGCTTCTGAGCAGAGGGAACAGAATATGCAAAGGCCAACAGGGCCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp GTTTGCACACACTCCTGCCCAACAATGTACCCACGGTaGTACCTAGACACAGACGGGCACAAACACATACAC +
Preference number: 3 (lower is better)
Translates to: VCTHSCPTMYPR*YLDTDGHKHIH
Trigger: GTGTATGTGTTTGTGCCCGTCTGTGTCTAGGTACCACCGTGGGTACATTGTTGGGCAGGAGTGTGTGCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp ATGACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTaGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGA +
Preference number: 3 (lower is better)
Translates to: MTVSEQLRGHPR*QFRASRENVPR
Trigger: TCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
3UTR-3UTR CAA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCAGGACAAGGCCTATGTaGCGCCGAGGTCCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICRTRPM*RRGPWV
Trigger: AACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCT...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp ATATGGTGTCCCAGAAATAGGTCAAGGAATCTGGGGTaGCCTATGGTCTCCACCATCCAGTGCTCACTCTGG +
Preference number: 3 (lower is better)
Translates to: IWCPRNRSRNLG*PMVSTIQCSLW
Trigger: CCAGAGTGAGCACTGGATGGTGGAGACCATAGGTCACCCCAGATTCCTTGACCTATTTCTGGGACACCATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp GAGGAAAGATCTAGATCCCATCATGTCAATCTCAGGTaGCTAACCCAGGACCCAAGGACAGGGATCCCTTTC +
Preference number: 3 (lower is better)
Translates to: EERSRSHHVNLR*LTQDPRTGIPF
Trigger: GAAAGGGATCCCTGTCCTTGGGTCCTGGGTTAGGCACCTGAGATTGACATGATGGGATCTAGATCTTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp GTCCCAGAAATAGGTCAAGGAATCTGGGGTGACCTATaGTCTCCACCATCCAGTGCTCACTCTGGACAGAAT +
Preference number: 3 (lower is better)
Translates to: VPEIGQGIWGDL*SPPSSAHSGQN
Trigger: ATTCTGTCCAGAGTGAGCACTGGATGGTGGAGACCATAGGTCACCCCAGATTCCTTGACCTATTTCTGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp AAGGCCCCTCTCCACTTCCAAATTCATTGTCTGATATaGGGGCACCAAATCACAGAAGCGGGACGTCTCTTC +
Preference number: 3 (lower is better)
Translates to: KAPLHFQIHCLI*GHQITEAGRLF
Trigger: GAAGAGACGTCCCGCTTCTGTGATTTGGTGCCCCCATATCAGACAATGAATTTGGAAGTGGAGAGGGGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp TCTAGTTATAAGGGTCAAGGGATCCCCAGGAAAGAGTaGTCCTTCTGCCCCAACACACACACACACACACAC +
Preference number: 3 (lower is better)
Translates to: SSYKGQGIPRKE*SFCPNTHTHTH
Trigger: GTGTGTGTGTGTGTGTGTGTTGGGGCAGAAGGACCACTCTTTCCTGGGGATCCCTTGACCCTTATAACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp TGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCACTAACCTTGCACGGT +
Preference number: 3 (lower is better)
Translates to: CGRRRRHSRTWR*HCRGDSLTLHG
Trigger: ACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
3UTR CCA 72 bp TCCAGACCCAGCCACGGGCAAAATGATCTGTGCAAATaGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTAT +
Preference number: 3 (lower is better)
Translates to: SRPSHGQNDLCK*FGSPSGCRIFY
Trigger: ATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR-3UTR CAA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAGCCATCGCAGGCAGCTaGAGACTACAGAACAGGGCT +
Preference number: 3 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPAIAGS*RLQNRA
Trigger: AGCCCTGTTCTGTAGTCTCAAGCTGCCTGCGATGGC...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp GATGAAAGGTGGAATTTCAGGCCATCGCAGGCAGCTTaGGACTACAGAACAGGGCTGGACAGAGTCTATTCA +
Preference number: 3 (lower is better)
Translates to: DERWNFRPSQAA*DYRTGLDRVYS
Trigger: TGAATAGACTCTGTCCAGCCCTGTTCTGTAGTCTCAAGCTGCCTGCGATGGCCTGAAATTCCACCTTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp TGGGGAAACCAAGAGGATGAGCACATGAGAACATGCTaGCCTTCACTCCTAGCCCAAGCTCTTGTGAAGTCA +
Preference number: 3 (lower is better)
Translates to: WGNQEDEHMRTC*PSLLAQALVKS
Trigger: TGACTTCACAAGAGCTTGGGCTAGGAGTGAAGGTCAGCATGTTCTCATGTGCTCATCCTCTTGGTTTCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp GAAAACCATCCCTGTTGCAACTCCTGTTTGGATTTCTaGGTGCCCATCCCCCTCACTGTGTTTGTCCTCACA +
Preference number: 3 (lower is better)
Translates to: ENHPCCNSCLDF*VPIPLTVFVLT
Trigger: TGTGAGGACAAACACAGTGAGGGGGATGGGCACTCAGAAATCCAAACAGGAGTTGCAACAGGGATGGTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp TCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATaGAGTCCAGACCCAGCCACGGGCAAAATGATCTGT +
Preference number: 3 (lower is better)
Translates to: SSTLTYPRRSFL*SPDPATGKMIC
Trigger: ACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR CCA 72 bp GGTGGAGAAGGGAACTTTCAACTAGACAGTGCTTTTTaGCATTTTGCCCTGTACACACCCTCCTATCCAGGG +
Preference number: 3 (lower is better)
Translates to: GGEGNFQLDSAF*HFALYTPSYPG
Trigger: CCCTGGATAGGAGGGTGTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAGTTGAAAGTTCCCTTCTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp GGTGGGAACCAAGCAGCAATACTTTTTAAAGGACTCTaGTGGTTCTATTCTGCAGGCAAGGCCAGGAACCAC +
Preference number: 3 (lower is better)
Translates to: GGNQAAILFKGL*WFYSAGKARNH
Trigger: GTGGTTCCTGGCCTTGCCTGCAGAATAGAACCACCAGAGTCCTTTAAAAAGTATTGCTGCTTGGTTCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp TGCCCTTACTCCCCTTCCTTGAGCCTTCTAAGTTTTTaGGCCCTGTTGGCCTTTGCATATTCTGTTCCCTCT +
Preference number: 3 (lower is better)
Translates to: CPYSPSLSLLSF*ALLAFAYSVPS
Trigger: AGAGGGAACAGAATATGCAAAGGCCAACAGGGCCCAAAAACTTAGAAGGCTCAAGGAAGGGGAGTAAGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAGGGCCCTGTTGGCCTTaGCATATTCTGTTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPGPCWP*HILFPL
Trigger: CAGAGGGAACAGAATATGCAAAGGCCAACAGGGCCC...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp CGAATGGGTCTCAATCCAGTCTCACAGGCAGATATGTaGGATTGCACACACAGACCTGTGTTTGCACACACT +
Preference number: 3 (lower is better)
Translates to: RMGLNPVSQADM*DCTHRPVFAHT
Trigger: AGTGTGTGCAAACACAGGTCTGTGTGTGCAATCTCACATATCTGCCTGTGAGACTGGATTGAGACCCATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR TCA 72 bp ACAGATCTTCTCATCCTCAAAGTGGCAGGTGTTGTCTaGAAGGTTCGGAGAGTTGATGGGCTCTGTGTAGTG +
Preference number: 3 (lower is better)
Translates to: TDLLILKVAGVV*KVRRVDGLCVV
Trigger: CACTACACAGAGCCCATCAACTCTCCGAACCTTTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR GCA 72 bp AGGGAACTTTCAACTAGACAGTGCTTTTTGGCATTTTaGCCTGTACACACCCTCCTATCCAGGGCACCCTTT +
Preference number: 3 (lower is better)
Translates to: RELSTRQCFLAF*PVHTLLSRAPF
Trigger: AAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAGTTGAAAGTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CCA 72 bp CACACGCTGACGTACACGGACATTCATAGAAACGAATaGGTCTCAATCCAGTCTCACAGGCAGATATGTGAG +
Preference number: 3 (lower is better)
Translates to: HTLTYTDIHRNE*VSIQSHRQICE
Trigger: CTCACATATCTGCCTGTGAGACTGGATTGAGACCCATTCGTTTCTATGAATGTCCGTGTACGTCAGCGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCTCAAAGTGGCAGGTGTaGTCTGAAAGGTTCGGAGAG +
Preference number: 3 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICSKWQV*SERFGE
Trigger: CTCTCCGAACCTTTCAGACAACACCTGCCACTTTGA...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
3UTR-3UTR CAA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACCCTTTATATCTACATTaGCTTAAAGTCACTCCGTCT +
Preference number: 3 (lower is better)
Translates to: RSKRPELKLQGIFNSACHPLYLH*LKVTPS
Trigger: AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGG...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680397.1
3UTR TCA 72 bp GGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCTaGATGAACAAATGCACACAAGTTCACTGGGAGCAG +
Preference number: 3 (lower is better)
Translates to: GLPQRQCLVGIC*MNKCTQVHWEQ
Trigger: CTGCTCCCAGTGAACTTGTGTGCATTTGTTCATTCAGCAAATACCAACCAAACACTGCCTTTGTGGAAGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR GCA 72 bp AATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATaGAGAATCTTCTATCCCACTCCATTCTTGTTCATC +
Preference number: 3 (lower is better)
Translates to: NDLCKWFGSPSG*RIFYPTPFLFI
Trigger: GATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR CCA 72 bp GATGTAGTCCATATCATGACATCCACACCCTTGATTTaGGGTCACTTTGCAAATGCTCATCACTGCCTATCC +
Preference number: 3 (lower is better)
Translates to: DVVHIMTSTPLI*GHFANAHHCLS
Trigger: GGATAGGCAGTGATGAGCATTTGCAAAGTGACCCCAAATCAAGGGTGTGGATGTCATGATATGGACTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp GGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCCCTTTATATCTACATTaGCTTAAAGTCACTCCGTCT +
Preference number: 3 (lower is better)
Translates to: GQNDLCKWFGSPSGCRIFPLYLH*LKVTPS
Trigger: AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGG...GAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR-3UTR CAA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAAGTTTTTGGGCCCTGTaGGCCTTTGCATATTCTGTT +
Preference number: 3 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSSFWAL*AFAYSV
Trigger: AACAGAATATGCAAAGGCCAACAGGGCCCAAAAACT...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR-3UTR CAA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAATAATGCACCTGTACTaGAGTGAGCTTGAGCGGATT +
Preference number: 3 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSIMHLY*SELERI
Trigger: AATCCGCTCAAGCTCACTCAAGTACAGGTGCATTAT...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAAGAGGAGCCCTCCAGTaGCCCGGCCCCGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: TSVGGAFGVLGEGILPRPRGALQ*PGPDPG
Trigger: GCCAGGGTCGGGGCCGGGGCACTGGAGGGCTCCTCT...TGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCCCCGGCCCCGACCCTaGCCCACTCTGCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDPRPRP*PTLPCQ
Trigger: TTGGCAGGGCAGAGTGGGCCAGGGTCGGGGCCGGGG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAACCCCGGCCCCGACCCTaGCCCACTCTGCCCTGCCAA +
Preference number: 4 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKPRPRP*PTLPCQ
Trigger: TTGGCAGGGCAGAGTGGGCCAGGGTCGGGGCCGGGG...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTCCAGGGGGCCGGGCTaGAAGCACTCGCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWSRGPG*KHSRRR
Trigger: TCGCCGCCGCGAGTGCTTTCAGCCCGGCCCCCTGGA...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGCGGCCGCCCTGCGTaGGTGCAATACGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: LRDQACVSRAPLFRDRTRSGRPA*VQYARC
Trigger: GCATCGAGCGTATTGCACGCACGCAGGGCGGCCGCT...CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAACTGGCGGCCGCGGCTTaGCCCGCACCTCGCATTGCA +
Preference number: 4 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKLAAAA*PAPRIA
Trigger: TGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAG...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATCTGGCGGCCGCGGCTTaGCCCGCACCTCGCATTGCA +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHLAAAA*PAPRIA
Trigger: TGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAG...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCGGGAGCAGCGCGGGCTaGGTTCGGCCGAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASGSSAG*VRPRDE
Trigger: CTCGTCCCTCGGCCGAACCCAGCCCGCGCTGCTCCC...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGGGCCGGCCCAGCGCCTaGCGCACGTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRGRPSA*RTSWEL
Trigger: CAGTTCCCAGGACGTGCGCCAGGCGCTGGGCCGGCC...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 72 bp CCACTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCG +
Preference number: 4 (lower is better)
Translates to: PLRDQACVSRAP*FRDRTRRLREP
Trigger: CGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp TTGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCGATGTGTTTCCCGTACATGTCCAGGGGGCCGGGCTaGAAGCACTCGCGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LFRDRTRRLREPMCFPYMSRGPG*KHSRRR
Trigger: TCGCCGCCGCGAGTGCTTTCAGCCCGGCCCCCTGGA...CATGTACGGGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCCCACGCGGATGGACTTaGTGGCCGGCACCCCCACGC +
Preference number: 4 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASPRGWT*WPAPPR
Trigger: GCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGG...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGGCACTGAAGGGATGCTaGGGGTGCCACCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQALKGC*GCHPGP
Trigger: TGGCCCAGGGTGGCACCCTCAGCATCCCTTCAGTGC...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp CTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGGAAGCACCCAGGTGGTaGCAGGCCAGTGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LRDQACVSRAPLFRDRTREAPRW*QASGSC
Trigger: GCAGGAACCACTGGCCTGGCACCACCTGGGTGCTTC...CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACAGCTGTGGGCTGGACTaGCAGGGGGCTCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDSCGLD*QGAPLP
Trigger: GGGCAGTGGAGCCCCCTGCCAGTCCAGCCCACAGCT...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCACAGCCTGGTCTCCCCTaGCGGGGGTCACTCATGGGC +
Preference number: 4 (lower is better)
Translates to: TSVGGAFGVLGEGILPRPQPGLP*RGSLMG
Trigger: GCCCATGAGTGACCCCCGCCAGGGGAGACCAGGCTG...TGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTGTCGTTTCCCCGCACTaGGGCCGCCCCTCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFVVSPH*GRPSAE
Trigger: CTCCGCTGAGGGGCGGCCCCAGTGCGGGGAAACGAC...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCAGCCTGGCGCACGTCCTaGGAACTGGGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPAWRTS*ELGSTS
Trigger: GGAGGTGGAGCCCAGTTCCCAGGACGTGCGCCAGGC...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCGATGTGTTTCCCGTACATGGGCCGGCCCAGCGCCTaGCGCACGTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LFRDRTRRLREPMCFPYMGRPSA*RTSWEL
Trigger: CAGTTCCCAGGACGTGCGCCAGGCGCTGGGCCGGCC...CATGTACGGGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGCCGAGGCGATGCGCTaGGGGCTGCCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTAEAMR*GLPRSS
Trigger: GCTGCTGCGAGGCAGCCCCCAGCGCATCGCCTCGGC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
3UTR CAA 72 bp CCACTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PLRDQACVSRAP*FRDRTRRLREP
Trigger: AGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR TCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCAGCACTGAAGGGATGCTaGGGGTGCCACCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPALKGC*GCHPGP
Trigger: TGGCCCAGGGTGGCACCCTCAGCATCCCTTCAGTGC...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGGCAGGGGGCTCCACTaGCCGGCATCACCACCACTT +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHGRGLH*PASPPL
Trigger: AAGTGGTGGTGATGCCGGGCAGTGGAGCCCCCTGCC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATCATCTTCACGGCCGGTaGTTCATCCCCGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHHLHGR*FIPARR
Trigger: CCGCCTCGCGGGGATGAAGCACCGGCCGTGAAGATG...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDHAWPA*TICAWA
Trigger: AGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCACACAGCCGAGGCGATaGGCTGGGGGCTGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASTQPRR*AGGCLA
Trigger: TGCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGT...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGACCCTGGCCCACTCTaGCCTGCCAACACACACGGC +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHDPGPL*PANTHG
Trigger: GCCGTGTGTGTTGGCAGGGCAGAGTGGGCCAGGGTC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGCAGCCTGGTCTCCCCTaGCGGGGGTCACTCATGGGC +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQQPGLP*RGSLMG
Trigger: GCCCATGAGTGACCCCCGCCAGGGGAGACCAGGCTG...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGGGGCGAGGCTGCCACTaGGGAGATGTGCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQGRGCH*GDVLDP
Trigger: TGGATCCAGCACATCTCCCCAGTGGCAGCCTCGCCC...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTGCACGTCCTGGGAACTaGGCTCCACCTCCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFARPGN*APPPAG
Trigger: TCCCGCCGGAGGTGGAGCCCAGTTCCCAGGACGTGC...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGGCCGGCCCAGCGCCTaGCGCACGTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEGRPSA*RTSWEL
Trigger: CAGTTCCCAGGACGTGCGCCAGGCGCTGGGCCGGCC...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGCTGTCTGCACCCACTaGGACCTCCAGCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHAVCTH*DLQQHP
Trigger: GGGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGCAAGGCACTGCAGCATaGGGGTGTCCCCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRQGTAA*GCPPPG
Trigger: TCCGGGAGGGGGACACCCTCATGCTGCAGTGCCTTG...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGAACCCCGCTTCCAGATaGAGCGGGCAGGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRNPASR*SGQAGW
Trigger: CCAACCCGCCTGCCCGCTTCATCTGGAAGCGGGGTT...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGGACTCCGCTGAACCCTaGACCCAACCTCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQDSAEP*TQPQPV
Trigger: CACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTC...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGCATCCTTGCAGCCAATaGAGGCCCCCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRHPCSQ*RPPPWR
Trigger: CCGCCAGGGAGGGGGCCTGCATTGGCTGCAAGGATG...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGCCCAGAGGGCGAGGCTaGCACTGGGGAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWPRGRG*HWGDVL
Trigger: CAGCACATCTCCCCAGTGGCAGCCTCGCCCTCTGGG...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQMYSSS*PFSTRR
Trigger: CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACAT...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCGCCGCCCTGCGTGCGTaGAATACGCTCGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: QAILKAGLSAPTETSSSIAALRA*NTLDAQ
Trigger: CTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGC...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGAGCGGCCGCCCTGCGTaGGTGCAATACGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRSGRPA*VQYARC
Trigger: GCATCGAGCGTATTGCACGCACGCAGGGCGGCCGCT...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGAGGTCGGGCACGGGTaGCCCTGGGAAAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHEVGHG*PWERSH
Trigger: ATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACAACTGCACGTTCAGCTaGACCTGGGCCTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDNCTFS*TWASRG
Trigger: CCCCCGTGAGGCCCAGGTGCAGCTGAACGTGCAGTT...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGTTGAGAAGGGCAGCAGCTaGAGACACTGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: RPGVRVQSPFVPGPHQEVEKGSS*RHCGGR
Trigger: CCTCCCACCACAGTGTCTGCAGCTGCTGCCCTTCTC...AACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCAGAGGAGCCCTCCAGTaGCCCGGCCCCGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGRGALQ*PGPDPG
Trigger: GCCAGGGTCGGGGCCGGGGCACTGGAGGGCTCCTCT...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCAGCCCCAAGTAGGGTaGAGGGTGGGGTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDQPQVG*RVGSVG
Trigger: CCCTACAGACCCCACCCTGCACCCTACTTGGGGCTG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGCCTGGGCACCCCAGCTaGCGGGGGTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQPGHPS*RGSVFG
Trigger: ACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGCAGGCTCACTTGTGCTaGGCACGAGCGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRQAHLC*ARAGGG
Trigger: GCCACCTCCCGCTCGTGCCCAGCACAAGTGAGCCTG...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCTGAAGAGGCGGAGGTaGCGGCGACCCGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDLKRRR*RRPVFL
Trigger: GAGAAACACGGGTCGCCGCCACCTCCGCCTCTTCAG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATCGCTACCTGCCGTCTTaGTCCACCGTACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHRYLPS*STVPGV
Trigger: GACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCG...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAATCACCAGCAGCCGCTTaGACATGCGTGCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKSPAAA*TCVPAC
Trigger: GCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGA...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATTCACCAGCAGCCGCTTaGACATGCGTGCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHSPAAA*TCVPAC
Trigger: GCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGA...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAACGTTCAGCTGCACCTaGGCCTCACGGGGGCGCACG +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRTFSCT*ASRGRT
Trigger: CGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACGT...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CACAGCTCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACACGTTCAGCTGCACCTaGGCCTCACGGGGGCGCACG +
Preference number: 4 (lower is better)
Translates to: HSSHHLCNAKRKMAMGPHTFSCT*ASRGRT
Trigger: CGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACGT...GTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGCCGAGGCGATGCGCTaGGGGCTGCCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTAEAMR*GLPRSS
Trigger: GCTGCTGCGAGGCAGCCCCCAGCGCATCGCCTCGGC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACACTGTGGTGGGAGGGTaGCCACCTCTGTGTGGCACC +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDTVVGG*PPLCGT
Trigger: GGTGCCACACAGAGGTGGCCACCCTCCCACCACAGT...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGTTGTGCTTCCCGGCCTTTaGAAGCATGGAGGACTCCGC +
Preference number: 4 (lower is better)
Translates to: RPGVRVQSPFVPGPHQEVVLPGL*KHGGLR
Trigger: GCGGAGTCCTCCATGCTTCCAAAGGCCGGGAAGCAC...AACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCATTGAGGTCTCAGGGCTaGTGCAGCCCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPLRSQG*CSPFPP
Trigger: GGGAGGGAAGGGGCTGCACCAGCCCTGAGACCTCAA...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTACAGCTCCCAGAGAGTaGGGGGACTGGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFTAPRE*GDWHLL
Trigger: GAGCAGGTGCCAGTCCCCTCACTCTCTGGGAGCTGT...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTTCAGACAGAGGCCTTaGCTGGGTCAGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQFRQRP*LGQEGS
Trigger: GCTGCCTTCCTGACCCAGTCAAGGCCTCTGTCTGAA...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTATGCCTCAGTCACCCTaGCCCAGAGGGCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TWRWHCRGDSLTLHGPPAMPQSP*PRGRGC
Trigger: GCAGCCTCGCCCTCTGGGTCAGGGTGACTGAGGCAT...AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp AGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGTTTGTCAGGCCCATCTCTaGGAGGTAGGGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: RPGVRVQSPFVPGPHQEVCQAHL*EVGVEG
Trigger: TCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACA...AACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp ATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: MRGLGRVVESWSSTLTYPVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...GGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR TCA 90 bp ACACGGAGATCGGTCAGGATGTACTCCAGCAGCTGCCCCTTCTCCACACGCCGGCCTTTCCCTGAGAGGTaGGAGAGAGAGCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: TRRSVRMYSSSCPFSTRRPFPER*ERERRR
Trigger: TCGTCGCCGCTCTCTCTCTCACCTCTCAGGGAAAGG...CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACATCCTGACCGATCTCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCCACGCGGATGGACTTaGTGGCCGGCACCCCCACGC +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGPRGWT*WPAPPR
Trigger: GCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGG...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp AGTCCAGACCCAGCCACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCACCACGCGGATGGACTTaGTGGCCGGCACCCCCACGC +
Preference number: 4 (lower is better)
Translates to: SPDPATGKMICANGLGAPPRGWT*WPAPPR
Trigger: GCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGG...TGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGGCTCTAGGCTGCTGGTaGCTGCGGGCAGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRALGCW*LRAAQD
Trigger: ATCCTGAGCTGCCCGCAGTCACCAGCAGCCTAGAGC...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTGCACGCCCCATCCGTaGCCCTCCCGGTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGICTPHP*PSRSLG
Trigger: CCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCA...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTTATTGGGATCCGTCTaGTTCCGGGGACACTCCCCC +
Preference number: 4 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQLLGSV*FRGHSP
Trigger: GGGGGAGTGTCCCCGGAAGCAGACGGATCCCAATAA...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCAGAGGGGCTCCATGTCTaGCCCACTTCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPEGLHV*PTSGSL
Trigger: AAGGGAGCCAGAAGTGGGGCAGACATGGAGCCCCTC...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAACCCCTCCTCCTTCACTaGCCCTGGGTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: VGGAFGVLGEGILPRPVKPLLLH*PWVEKG
Trigger: TCCCTTCTCCACCCAGGGGCAGTGAAGGAGGAGGGG...TTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGAGATGGGCAGCCTTTaGCTCGGTTCCCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTEMGSL*LGSPPA
Trigger: GGCAGGCGGGGAACCGAGGCAAAGGCTGCCCATCTC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGCATCTTCACGGCCGGTaGTTCATCCCCGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGHLHGR*FIPARR
Trigger: CCGCCTCGCGGGGATGAAGCACCGGCCGTGAAGATG...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTGTCCGAGGCGCTACCTaGCGTCTTGGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFVRGAT*RLGPPY
Trigger: GTACGGTGGACCAAGACGGCAGGTAGCGCCTCGGAC...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACGCCGCCCTGCGTGCGTaGAATACGCTCGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHAALRA*NTLDAQ
Trigger: CTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGC...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGGGCCCATGGGACCACTaGAGCTGGGGGAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRGPWDH*SWGRGS
Trigger: TGATCCCCTCCCCCAGCTGCAGTGGTCCCATGGGCC...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGGAGGTCGGGCACGGGTaGCCCTGGGAAAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQREVGHG*PWERSH
Trigger: ATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTC...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGCCCCGCACCTCGCATTaGAGCTCGGCAGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWPRTSH*SSAGDP
Trigger: GGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGG...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCACCCCGCACCTCGCATTaGAGCTCGGCAGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPPRTSH*SSAGDP
Trigger: GGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGG...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACCTGGCGGCCGCGGCTTaGCCCGCACCTCGCATTGCA +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHLAAAA*PAPRIA
Trigger: TGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAG...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGACGATGCGCTGGGGGCTaGCTCGCAGCAGCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGRCAGG*LAAASS
Trigger: GCTGCTCGCTGCTGCGAGGCAGCCCCCAGCGCATCG...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGATGCGCTGGGGGCTaGCTCGCAGCAGCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGRCAGG*LAAASS
Trigger: GCTGCTCGCTGCTGCGAGGCAGCCCCCAGCGCATCG...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGACCTGGGCACCCCAGCTaGCGGGGGTCAGTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRPGHPS*RGSVFG
Trigger: ACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGCCTGGCAGGGGGAGATaGGCAGCCTTTGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEPGRGR*AAFASV
Trigger: AACCGAGGCAAAGGCTGCCCATCTCCCCCTGCCAGG...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCGGCAGCCGTGCTGATTaGGCATCAGAAGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: QAILKAGLSAPTETSSSIGSRAD*ASEGPA
Trigger: AGCGGGGCCTTCTGATGCCCAATCAGCACGGCTGCC...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGGAGGAAGCACCCAGGTaGTGCCAGGCCAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWEEAPR*CQASGS
Trigger: GGAACCACTGGCCTGGCACCACCTGGGTGCTTCCTC...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGTGGATCCAGCCAGCCTaGTCTCCCCTGGCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVWIQPA*SPLAGV
Trigger: GACCCCCGCCAGGGGAGACCAGGCTGGCTGGATCCA...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGTCGTTTCCCCGCACTaGGGCCGCCCCTCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQVVSPH*GRPSAE
Trigger: CTCCGCTGAGGGGCGGCCCCAGTGCGGGGAAACGAC...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCGCTACCTGCCGTCTTaGTCCACCGTACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QAILKAGLSAPTETSSSIRYLPS*STVPGV
Trigger: GACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCG...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGCCTGGCAGGTGTAGCTaGCATAGTCCTGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEPGRCS*HSPGAA
Trigger: TGCGGCCCCAGGACTATGCCAGCTACACCTGCCAGG...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGAGACAGCTTCAGGGCTaGTGGTGCCGTGGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQRQLQG*WCRGVG
Trigger: ACCAACACCACGGCACCACCAGCCCTGAAGCTGTCT...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGACGTTCAGCTGCACCTaGGCCTCACGGGGGCGCACG +
Preference number: 4 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLTFSCT*ASRGRT
Trigger: CGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACGT...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCACGTTCAGCTGCACCTaGGCCTCACGGGGGCGCACG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGTFSCT*ASRGRT
Trigger: CGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACGT...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GATACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCAGCACGTCCTGGGAACTaGGCTCCACCTCCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: DTVNRSVCSSRGWGPGFSARPGN*APPPAG
Trigger: TCCCGCCGGAGGTGGAGCCCAGTTCCCAGGACGTGC...TGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTGCACGTCCTGGGAACTaGGCTCCACCTCCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCARPGN*APPPAG
Trigger: TCCCGCCGGAGGTGGAGCCCAGTTCCCAGGACGTGC...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGGGCCGGCCCAGCGCCTaGCGCACGTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: SSRGWGPGFSLFTQVHSLGRPSA*RTSWEL
Trigger: CAGTTCCCAGGACGTGCGCCAGGCGCTGGGCCGGCC...CAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TCTCACCTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAGCCGAGGCGATGCGCTaGGGGCTGCCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SHLPQKKLLMKSRPSHGQAEAMR*GLPRSS
Trigger: GCTGCTGCGAGGCAGCCCCCAGCGCATCGCCTCGGC...TTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp ACACGGAGATCGGTCAGGATGTACTCCAGCAGCTGCCCCTTCTCCACACGCCGGCCCAACCTCAGCCAGTaGCTCTGCAGGGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TRRSVRMYSSSCPFSTRRPNLSQ*LCRDSP
Trigger: TGGAGAGTCCCTGCAGAGCCACTGGCTGAGGTTGGG...CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACATCCTGACCGATCTCCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGCCTCAGTCACCCTaGCCCAGAGGGCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEMPQSP*PRGRGC
Trigger: GCAGCCTCGCCCTCTGGGTCAGGGTGACTGAGGCAT...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGCAAGGCACTGCAGCATaGGGGTGTCCCCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEQGTAA*GCPPPG
Trigger: TCCGGGAGGGGGACACCCTCATGCTGCAGTGCCTTG...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp ACACGGAGATCGGTCAGGATGTACTCCAGCAGCTGCCCCTTCTCCACACGCCGGTGCGCAGCGTCTCGTTaGACACCGATGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TRRSVRMYSSSCPFSTRRCAASR*TPMSPG
Trigger: TCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCA...CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACATCCTGACCGATCTCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTCCACGCGGATGGACTTaGTGGCCGGCACCCCCACGC +
Preference number: 4 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFPRGWT*WPAPPR
Trigger: GCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGG...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGAACCCCGCTTCCAGATaGAGCGGGCAGGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAENPASR*SGQAGW
Trigger: CCAACCCGCCTGCCCGCTTCATCTGGAAGCGGGGTT...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCCATCCTTGCAGCCAATaGAGGCCCCCTCCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIHPCSQ*RPPPWR
Trigger: CCGCCAGGGAGGGGGCCTGCATTGGCTGCAAGGATG...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGGAGGGGCTCCATGTCTaGCCCACTTCTGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQEGLHV*PTSGSL
Trigger: AAGGGAGCCAGAAGTGGGGCAGACATGGAGCCCCTC...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACGAGGGGACTGGCACCTaGTCCCTCCACCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHEGTGT*SLHQSQ
Trigger: CTGGGATTGGTGGAGGGAGCAGGTGCCAGTCCCCTC...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACACCTGCCTCCTGGCACTaGAGTGCTGCCCGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTPASWH*SAARVP
Trigger: TGGAACTCGGGCAGCACTGCAGTGCCAGGAGGCAGG...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCGAGATGGGCAGCCTTTaGCTCGGTTCCCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSEMGSL*LGSPPA
Trigger: GGCAGGCGGGGAACCGAGGCAAAGGCTGCCCATCTC...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCACGGAGCAGCCAGGGTTaGGGGGCAAATGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: TSVGGAFGVLGEGILPRPRSSQG*GANGLE
Trigger: TTCCAATCCATTTGCCCCGCAACCCTGGCTGCTCCG...TGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGCCCAGAGGGCGAGGCTaGCACTGGGGAGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVPRGRG*HWGDVL
Trigger: CAGCACATCTCCCCAGTGGCAGCCTCGCCCTCTGGG...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRMYSSS*PFSTRR
Trigger: CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACAT...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGCATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWHAWPA*TICAWA
Trigger: AGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATG...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCGCCGCCCTGCGTGCGTaGAATACGCTCGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGAALRA*NTLDAQ
Trigger: CTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGC...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGGGCCCATGGGACCACTaGAGCTGGGGGAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLGPWDH*SWGRGS
Trigger: TGATCCCCTCCCCCAGCTGCAGTGGTCCCATGGGCC...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCACGATGCGCTGGGGGCTaGCTCGCAGCAGCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPRCAGG*LAAASS
Trigger: GCTGCTCGCTGCTGCGAGGCAGCCCCCAGCGCATCG...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGACACAGCCGAGGCGATaGGCTGGGGGCTGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTTQPRR*AGGCLA
Trigger: TGCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGT...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGACTCGTAGCTGCCGCTaGTGTCGCGAGTTACGGCGT +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQTRSCR*CRELRR
Trigger: ACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGT...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCGCTGCACTCGTAGCTaGCGCTGCTGTCGCGAGTTA +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFRCTRS*RCCREL
Trigger: TAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGGTGGGGTGGGCAGATaGCATCCCTCTGGACCTCGC +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAGGVGR*HPSGPR
Trigger: GCGAGGTCCAGAGGGATGGCATCTGCCCACCCCACC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGGGTGGGGTGGGCAGATaGCATCCCTCTGGACCTCGC +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWGGVGR*HPSGPR
Trigger: GCGAGGTCCAGAGGGATGGCATCTGCCCACCCCACC...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCGACCCTGGCCCACTCTaGCCTGCCAACACACACGGC +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSDPGPL*PANTHG
Trigger: GCCGTGTGTGTTGGCAGGGCAGAGTGGGCCAGGGTC...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTGGGAGCAGACCAGGATaGAGGTCCTCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFGSRPG*RSSLSR
Trigger: CCTGGACAGTGAGGACCTGCATCCTGGTCTGCTCCC...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGCAGCCCCAAGTAGGGTaGAGGGTGGGGTCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRQPQVG*RVGSVG
Trigger: CCCTACAGACCCCACCCTGCACCCTACTTGGGGCTG...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGCCGAGGTCCCTGGGTTaGCGGATGCCATTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQPRSLG*RMPFRQ
Trigger: TTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGG...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCTTGCGCCGAGGTCCCTaGGTTGGCGGATGCCATTCA +
Preference number: 4 (lower is better)
Translates to: QAILKAGLSAPTETSSSILRRGP*VGGCHS
Trigger: TGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAA...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCATCTCTCTCCCATGGATaGCTAGGTGGGGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPSLSHG*LGGGSG
Trigger: ACCTGAGCCCCCACCTAGCCATCCATGGGAGAGAGA...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGGGCAGCCGTGCTGATTaGGCATCAGAAGGCCCCGCT +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGGSRAD*ASEGPA
Trigger: AGCGGGGCCTTCTGATGCCCAATCAGCACGGCTGCC...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGCAGGCTCACTTGTGCTaGGCACGAGCGGGAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEQAHLC*ARAGGG
Trigger: GCCACCTCCCGCTCGTGCCCAGCACAAGTGAGCCTG...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCAGGCACAGGGTGCCTTaGGAACCCCAAAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: QAILKAGLSAPTETSSSIRHRVP*EPQRGS
Trigger: GCTCCCTCTTTGGGGTTCCCAAGGCACCCTGTGCCT...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGGGCGGGGGTCACTCATaGGCCACCCATCAACACACA +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRGGGHS*ATHQHT
Trigger: TGTGTGTTGATGGGTGGCCCATGAGTGACCCCCGCC...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACTGGATCCAGCCAGCCTaGTCTCCCCTGGCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHWIQPA*SPLAGV
Trigger: GACCCCCGCCAGGGGAGACCAGGCTGGCTGGATCCA...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGCGCCCCGCGGGAATCTaGAGAGCAATTCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRRPAGI*RAIPGK
Trigger: CTTGCCTGGAATTGCTCTCCAGATTCCCGCGGGGCG...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCATTCACCACACATGCCTaGCCCGCATGCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: TSVGGAFGVLGEGILPRPFTTHA*PACTIC
Trigger: GCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAA...TGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGCGCTACCTGCCGTCTTaGTCCACCGTACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRRYLPS*STVPGV
Trigger: GACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCG...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGTTGTGCACCGTCAGCATTaGCTCATCCAGGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: RPGVRVQSPFVPGPHQEVVHRQH*LIQVLH
Trigger: GTGCAGTACCTGGATGAGCCAATGCTGACGGTGCAC...AACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGCCATTGTCCTGGCTGTaGGATAGGGTATCGGAACCC +
Preference number: 4 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQPLSWL*DRVSEP
Trigger: GGGTTCCGATACCCTATCCCACAGCCAGGACAATGG...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAGGCACTGCATCCACGTaGCACGATAGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKGTAST*HDSFRS
Trigger: GGACCTGAAGCTATCGTGCCACGTGGATGCAGTGCC...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCGATGTGTTTCCCGTACATGGGGCACGGGTGCCCCTaGGAAAGAAGCCATGCACAG +
Preference number: 4 (lower is better)
Translates to: LFRDRTRRLREPMCFPYMGHGCP*ERSHAQ
Trigger: CTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCC...CATGTACGGGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAGCACGTCCTGGGAACTaGGCTCCACCTCCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGARPGN*APPPAG
Trigger: TCCCGCCGGAGGTGGAGCCCAGTTCCCAGGACGTGC...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGCCTGGCGCACGTCCTaGGAACTGGGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRAWRTS*ELGSTS
Trigger: GGAGGTGGAGCCCAGTTCCCAGGACGTGCGCCAGGC...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGCCTGGCGCACGTCCTaGGAACTGGGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDAWRTS*ELGSTS
Trigger: GGAGGTGGAGCCCAGTTCCCAGGACGTGCGCCAGGC...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGGCCGAGGCGATGCGCTaGGGGCTGCCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: MLITRVGARLLIVYTSTQAEAMR*GLPRSS
Trigger: GCTGCTGCGAGGCAGCCCCCAGCGCATCGCCTCGGC...CTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp ATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCTTCTTGGACAGCTTGTaGCTGCGGGTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: MRGLGRVVESWSSTLTYPFLDSL*LRVGLG
Trigger: CCCCAACCCCACCCGCAGCCACAAGCTGTCCAAGAA...GGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGAGGGTCTCTTCTGTCTaGGGGCCTGGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDERVSSV*GPGRRA
Trigger: TGCCCTTCTCCCAGGCCCCCAGACAGAAGAGACCCT...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACCGGGGTGGGCTGGGGTaGTCAGACATGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDRGGLG*SDMWAW
Trigger: CCAGGCCCACATGTCTGACCACCCCAGCCCACCCCG...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGTGGCGGGGTGGGCTaGGGTGGTCAGACATGTGGG +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRGGGVG*GGQTCG
Trigger: CCCACATGTCTGACCACCCCAGCCCACCCCGCCACC...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 72 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCCGAGGCCTCGATGTCT +
Preference number: 4 (lower is better)
Translates to: TWRWHCRGDSLT*HGPPAPEASMS
Trigger: AGACATCGAGGCCTCGGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCGGAAGGCAGCCGTGCTaGTTGGGCATCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIGRQPC*LGIRRP
Trigger: GGGCCTTCTGATGCCCAATCAGCACGGCTGCCTTCC...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGGAAGGCAGCCGTGCTaGTTGGGCATCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAGRQPC*LGIRRP
Trigger: GGGCCTTCTGATGCCCAATCAGCACGGCTGCCTTCC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCGCTGTCTGCACCCACTaGGACCTCCAGCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGAVCTH*DLQQHP
Trigger: GGGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGC...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCCCCACTGGCATACACTaGCACCCACATCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIPTGIH*HPHPPP
Trigger: GGGTGGGGGATGTGGGTGTCAGTGTATGCCAGTGGG...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGGTCCATCCTCACTCTaGCAGCCTGAGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEGPSSL*QPEPGA
Trigger: AGCCCCTGGCTCAGGCTGTCAGAGTGAGGATGGACC...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGGGACCGGGATGGCCTTaGCCACCGCATTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVGPGWP*PPHCAG
Trigger: ACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCC...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGGACCGGGATGGCCTTaGCCACCGCATTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPGPGWP*PPHCAG
Trigger: ACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCC...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGCCACGCGGATGGACTTaGTGGCCGGCACCCCCACGC +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLPRGWT*WPAPPR
Trigger: GCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGG...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGCAGGCGGGTTGGAGTTaGCAGTACAGCGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRQAGWS*QYSAGT
Trigger: TGTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTG...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGCAGGCGGGTTGGAGTTaGCAGTACAGCGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQQAGWS*QYSAGT
Trigger: TGTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTG...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGAAGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCGCTCTAGGCTGCTGGTaGCTGCGGGCAGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GSQMEMRGLGRVVESWSSALGCW*LRAAQD
Trigger: ATCCTGAGCTGCCCGCAGTCACCAGCAGCCTAGAGC...GGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTCTAGGCTGCTGGTaGCTGCGGGCAGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPALGCW*LRAAQD
Trigger: ATCCTGAGCTGCCCGCAGTCACCAGCAGCCTAGAGC...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGCACGGGGGCGCACGTTaGAGCCATTATAGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREHGGAR*SHYSGP
Trigger: CGGCCCGCTATAATGGCTTCAACGTGCGCCCCCGTG...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACACGGGGGCGCACGTTaGAGCCATTATAGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGHGGAR*SHYSGP
Trigger: CGGCCCGCTATAATGGCTTCAACGTGCGCCCCCGTG...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CCGAGGCCTCGATGTCTCGATGAACATGTAGTAGCCCTCAGGGGTGCCACTTATCACGGGGGCGCACGTTaGAGCCATTATAGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: PRPRCLDEHVVALRGATYHGGAR*SHYSGP
Trigger: CGGCCCGCTATAATGGCTTCAACGTGCGCCCCCGTG...ATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGCAGCAGCTGCCCTTTaGAACGCCACACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAAAAAL*NATQPR
Trigger: CCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAACCGCACCAGGAGGTTaGGGGAGCCGATGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTTAPGG*GSRCVS
Trigger: GGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGT...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTACCGCACCAGGAGGTTaGGGGAGCCGATGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: TWRWHCRGDSLTLHGPPATAPGG*GSRCVS
Trigger: GGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGT...AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGGTCTGCAGCCTGGGATaGGAGGCCAGAATTTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQVCSLG*EARIWS
Trigger: GCTCCAAATTCTGGCCTCTCATCCCAGGCTGCAGAC...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGTGCACGCCCCATCCGTaGCCCTCCCGGTCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQCTPHP*PSRSLG
Trigger: CCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCA...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCATGGAGGACTCCGCTaGACCCTGAACCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFHGGLR*TLNPTS
Trigger: TGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCATG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGAGGGTCCCTGGGAAATaGGTGCAGGCAACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRRVPGK*VQATRG
Trigger: CCCTCTTGTTGCCTGCACTCATTTCCCAGGGACCCT...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATACGTTCCAAGAGGCCTaGGCTGAAGCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHTFQEA*AEAPRH
Trigger: ATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGT...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGGCAGGGGGCTCCACTaGCCGGCATCACCACCACTT +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTGRGLH*PASPPL
Trigger: AAGTGGTGGTGATGCCGGGCAGTGGAGCCCCCTGCC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACGCGGGACGTCTCTTCTaGCTTTCTCCAAGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDAGRLF*LSPSQA
Trigger: GGCTTGACTTGGAGAAAGGCAGAAGAGACGTCCCGC...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCGCTGTCCCCACCAAATaGTCCAGAAGGAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: QAILKAGLSAPTETSSSIAVPTK*SRRSPV
Trigger: CACAGGGCTCCTTCTGGAGCATTTGGTGGGGACAGC...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCATCCAGGCCTCTTCTCTaGAGCTGTCCCCACCAAATG +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPSRPLL*SCPHQM
Trigger: CATTTGGTGGGGACAGCTGCAGAGAAGAGGCCTGGA...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTCACCAGGCTCACTTGTaGTGGGCACGAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCHQAHL*WARAGG
Trigger: ACCTCCCGCTCGTGCCCAGCACAAGTGAGCCTGGTG...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGAAGCACCCAGGTGGTaGCAGGCCAGTGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLEAPRW*QASGSC
Trigger: GCAGGAACCACTGGCCTGGCACCACCTGGGTGCTTC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTGTCAGGTCCTGGGCCACTGGGGAGATGTaGTGGATCCAGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: FWVRAFCRVQSKLSVRSWATGEM*WIQPAW
Trigger: CCAGGCTGGCTGGATCCAGCACATCTCCCCAGTGGC...CCAGGACCTGACAGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp ACTAACCTTGCACGGTCCCCCAGCTCCCGAGGCCTCGATGTCTCGATGAACATGATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: TNLARSPSSRGLDVSMNMMYSSS*PFSTRR
Trigger: CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACAT...CATGTTCATCGAGACATCGAGGCCTCGGGAGCTGGGGGACCGTGCAAGGTTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: GRVVESWSSTLTYPRRSFMYSSS*PFSTRR
Trigger: CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACAT...GAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGCATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREHAWPA*TICAWA
Trigger: AGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATG...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACACCTGGGGTCGAGGGTaGCCTGTTACAAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHTWGRG*PVTRHC
Trigger: GCAGTGCCTTGTAACAGGGCACCCTCGACCCCAGGT...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGGTCCGAGGCGCTACCTaGCGTCTTGGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWVRGAT*RLGPPY
Trigger: GTACGGTGGACCAAGACGGCAGGTAGCGCCTCGGAC...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp TACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGCCGCCCTGCGTGCGTaGAATACGCTCGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: YREQVSMLITRVGARLLIAALRA*NTLDAQ
Trigger: CTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGC...AATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCAGCGGCCGCCCTGCGTaGGTGCAATACGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: AHHEGGGQASHCLHKYTASGRPA*VQYARC
Trigger: GCATCGAGCGTATTGCACGCACGCAGGGCGGCCGCT...GGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGCGCCGTTCTCAGCCTTaGAGTAGTAGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWRRSQP*SSSGRP
Trigger: AGGGCGGCCGCTACTACTGCAAGGCTGAGAACGGCG...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGTCGCTCACCGTCTGGTaGACCGTCAGCATTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDESLTVW*TVSIGS
Trigger: TGAGCCAATGCTGACGGTGCACCAGACGGTGAGCGA...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCCAGAGTCCCGGGCCTaGACTGAAGGGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLPESRA*TEGMLR
Trigger: CCTCAGCATCCCTTCAGTGCAGGCCCGGGACTCTGG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGCAGCCGCTTGGACATaGGTGCCGGCTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTAAAWT*VPACHS
Trigger: AGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCGCAGCCGCTTGGACATaGGTGCCGGCTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: NERTRQGGGVLVIHSHLPAAAWT*VPACHS
Trigger: AGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGC...GGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCGCAGCTCAGGATCATTaGGGGTCACCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GRVVESWSSTLTYPRRSFAAQDH*GSPAAA
Trigger: AGCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGC...GAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTACCCCGCACCTCGCATTaGAGCTCGGCAGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLPRTSH*SSAGDP
Trigger: GGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGG...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCTGGCGGCCGCGGCTTaGCCCGCACCTCGCATTGCA +
Preference number: 4 (lower is better)
Translates to: MLITRVGARLLIVYTSTQLAAAA*PAPRIA
Trigger: TGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAG...CTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTCGATGCGCTGGGGGCTaGCTCGCAGCAGCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: VSMLITRVGARLLIVYTSRCAGG*LAAASS
Trigger: GCTGCTCGCTGCTGCGAGGCAGCCCCCAGCGCATCG...ACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCCGATGCGCTGGGGGCTaGCTCGCAGCAGCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGHPLSPTPEEASYEVQTRCAGG*LAAASS
Trigger: GCTGCTCGCTGCTGCGAGGCAGCCCCCAGCGCATCG...GGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp AGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTAACACAGCCGAGGCGATaGGCTGGGGGCTGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: RVVESWSSTLTYPRRSFLTQPRR*AGGCLA
Trigger: TGCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGT...TAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAACTCGTAGCTGCCGCTaGTGTCGCGAGTTACGGCGT +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRTRSCR*CRELRR
Trigger: ACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGT...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGCGCTGCACTCGTAGCTaGCGCTGCTGTCGCGAGTTA +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGRCTRS*RCCREL
Trigger: TAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCG...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCATGGCCCACTCTGCCCTaGCAACACACACGGCTGACG +
Preference number: 4 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPWPTLP*QHTRLT
Trigger: CGTCAGCCGTGTGTGTTGGCAGGGCAGAGTGGGCCA...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGCCTGGCAGGGGGAGATaGGCAGCCTTTGCCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEPGRGR*AAFASV
Trigger: AACCGAGGCAAAGGCTGCCCATCTCCCCCTGCCAGG...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCGGGCGAGGCTGCCACTaGGGAGATGTGCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIGRGCH*GDVLDP
Trigger: TGGATCCAGCACATCTCCCCAGTGGCAGCCTCGCCC...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGCAGGAGGAGGGGGCTTaGTCTTCAGGCTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWQEEGA*SSGFTQ
Trigger: CTGAGTGAAGCCTGAAGACCAAGCCCCCTCCTCCTG...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATGGGAGCAGCGCGGGCTaGGTTCGGCCGAGGGACGAG +
Preference number: 4 (lower is better)
Translates to: VSRTCGRRRRHSRTWRWHGSSAG*VRPRDE
Trigger: CTCGTCCCTCGGCCGAACCCAGCCCGCGCTGCTCCC...ATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGCTGAAGAGGCGGAGGTaGCGGCGACCCGTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWLKRRR*RRPVFL
Trigger: GAGAAACACGGGTCGCCGCCACCTCCGCCTCTTCAG...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCCTTGTCCCCGGCAGTaGAAGGGGATCAGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLPCPRQ*KGISAR
Trigger: TCTGGCGCTGATCCCCTTCCACTGCCGGGGACAAGG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTTTGGTCCACCGTACCTaGGGTCGAGGGTGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: RQGGGVLVIHSHLPQKKLLVHRT*GRGCPV
Trigger: AACAGGGCACCCTCGACCCCAGGTACGGTGGACCAA...AAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp GAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCGCTACCTGCCGTCTTaGTCCACCGTACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EMRGLGRVVESWSSTLTYRYLPS*STVPGV
Trigger: GACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCG...GTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CCGAGGCCTCGATGTCTCGATGAACATGTAGTAGCCCTCAGGGGTGCCACTTATTGGGACCACTGCAGCTaGGGGAGGGGATCACCGCCT +
Preference number: 4 (lower is better)
Translates to: PRPRCLDEHVVALRGATYWDHCS*GRGSPP
Trigger: AGGCGGTGATCCCCTCCCCCAGCTGCAGTGGTCCCA...ATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCGGGCACGGGTGCCCCTaGGAAAGAAGCCATGCACAG +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIGHGCP*ERSHAQ
Trigger: CTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCC...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCGCCTGGCGCACGTCCTaGGAACTGGGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: CSSRGWGPGFSLFTQVHSAWRTS*ELGSTS
Trigger: GGAGGTGGAGCCCAGTTCCCAGGACGTGCGCCAGGC...GCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACACCGAGCCCACATCGTTaGAGACGCTGCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTPSPHR*RRCTRS
Trigger: GCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGG...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGCTTTGGCGGAGACCTaGAAGAGGCAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAALAET*KRQAAE
Trigger: CTCGGCTGCCTGCCTCTTCCAGGTCTCCGCCAAAGC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000650466.1
CDS-3UTR CCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCGTAGGAGTAGTTCTTaGACAGCTTGTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDRRSSS*TACGCG
Trigger: CCCGCAGCCACAAGCTGTCCAAGAACTACTCCTACG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434837.8
CDS-3UTR CCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGCGGCCTTTGGAAGCATaGAGGACTCCGCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDERPLEA*RTPLNP
Trigger: AGGGTTCAGCGGAGTCCTCCATGCTTCCAAAGGCCG...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACACCTCGCCTGTACAATaGGGGCACCAGCTTAGATGC +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDTSPVQ*GHQLRC
Trigger: GCATCTAAGCTGGTGCCCCCATTGTACAGGCGAGGT...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGGCAGGAAGAATGCATaGAGACCTAGAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHGRKNA*RPRGPP
Trigger: TGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGGTTGTGCTTTTACCTTaGTGGCGGGGTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRVVLLP*WRGGLG
Trigger: CCCCAGCCCACCCCGCCACCAAGGTAAAAGCACAAC...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 72 bp CAAGGACAAGGCCTATGTTGCGCCGAGGTCCCTGGGTaGGCGGATGCCATTCAGGCAAGTCCCCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QGQGLCCAEVPG*ADAIQASPLSL
Trigger: CAAAGACAGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 72 bp AAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTaGCGCCGAGGTCCCTGGGTTGGCGGATGCCATTCA +
Preference number: 4 (lower is better)
Translates to: KHTTSAARTRPM*RRGPWVGGCHS
Trigger: TGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 72 bp AAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTaGCGGGGCAAATGGATTGGAAGGTCCTCTGAGGGA +
Preference number: 4 (lower is better)
Translates to: KGDKSPLSEQPG*RGKWIGRSSEG
Trigger: TCCCTCAGAGGACCTTCCAATCCATTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGCTGGAGTTCGGCCTTaGCTTAGGGGACAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: VGGAFGVLGEGILPRPVKAGVRP*LRGQGK
Trigger: TTTACCCTGTCCCCTAAGTCAAGGCCGAACTCCAGC...TTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCAGGAGTCCCAGAGTCTaGCCAAGGGAGGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGRSPRV*PREGLH
Trigger: ATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCT...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAACAGCTCCCAGAGAGTaGGGGGACTGGCACCTGCTC +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRTAPRE*GDWHLL
Trigger: GAGCAGGTGCCAGTCCCCTCACTCTCTGGGAGCTGT...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCCTCACTCTGACAGCCTaGGCCAGGGGCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEALTLTA*ARGFPR
Trigger: TCTGGGAAAGCCCCTGGCTCAGGCTGTCAGAGTGAG...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTCTCACTCTGACAGCCTaGGCCAGGGGCTTTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCLTLTA*ARGFPR
Trigger: TCTGGGAAAGCCCCTGGCTCAGGCTGTCAGAGTGAG...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGGTCCATCCTCACTCTaGCAGCCTGAGCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTGPSSL*QPEPGA
Trigger: AGCCCCTGGCTCAGGCTGTCAGAGTGAGGATGGACC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAACTCAAACTAGCTGTGTaGCCTTGGGCCACTCCCCTT +
Preference number: 4 (lower is better)
Translates to: VGGAFGVLGEGILPRPVKLKLAV*PWATPL
Trigger: AAGGGGAGTGGCCCAAGGTCACACAGCTAGTTTGAG...TTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGACCGGGATGGCCTTaGCCACCGCATTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQGPGWP*PPHCAG
Trigger: ACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCC...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGGGACCGGGATGGCCTTaGCCACCGCATTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREGPGWP*PPHCAG
Trigger: ACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCC...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CCGAGGCCTCGATGTCTCGATGAACATGTAGTAGCCCTCAGGGGTGCCACTTATGGACCGGGATGGCCTTaGCCACCGCATTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PRPRCLDEHVVALRGATYGPGWP*PPHCAG
Trigger: ACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCC...ATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTAGGTGGTATAGGGTGTaGGGCGGACCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFRWYRV*GGPHSC
Trigger: ACAGCTATGAGGTCCGCCTCACACCCTATACCACCT...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGAGGTGGTATAGGGTGTaGGGCGGACCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRRWYRV*GGPHSC
Trigger: ACAGCTATGAGGTCCGCCTCACACCCTATACCACCT...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp ACCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGCCTCGATGTCTCGATaGACATGTAGTAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: TSVGGAFGVLGEGILPRPASMSR*TCSSPQ
Trigger: CTGAGGGCTACTACATGTTCATCGAGACATCGAGGC...TGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGCAGGCCACGGACGACTaGCAAACTTGTCGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRQATDD*QTCRFP
Trigger: GGGGAAACGACAAGTTTGTCAGTCGTCCGTGGCCTG...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACCAGGCCACGGACGACTaGCAAACTTGTCGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHQATDD*QTCRFP
Trigger: GGGGAAACGACAAGTTTGTCAGTCGTCCGTGGCCTG...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTACAAGGCACTGCAGCATaGGGGTGTCCCCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: RVVESWSSTLTYPRRSFLQGTAA*GCPPPG
Trigger: TCCGGGAGGGGGACACCCTCATGCTGCAGTGCCTTG...TAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGACAGGCGGGTTGGAGTTaGCAGTACAGCGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRQAGWS*QYSAGT
Trigger: TGTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTG...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTAACCCCGCTTCCAGATaGAGCGGGCAGGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFNPASR*SGQAGW
Trigger: CCAACCCGCCTGCCCGCTTCATCTGGAAGCGGGGTT...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACAACCCCGCTTCCAGATaGAGCGGGCAGGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENNPASR*SGQAGW
Trigger: CCAACCCGCCTGCCCGCTTCATCTGGAAGCGGGGTT...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGCACTGAAGGGATGCTaGGGGTGCCACCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENALKGC*GCHPGP
Trigger: TGGCCCAGGGTGGCACCCTCAGCATCCCTTCAGTGC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGATCGCACCAGCAGGTTaGCAGTCTTCTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRIAPAG*QSSWQG
Trigger: ACCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGAT...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTACCCTTGGGCACACTaGTGGTGGGCGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGYPWAH*WWAALS
Trigger: AGACAGTGCCGCCCACCATCAGTGTGCCCAAGGGTA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGCACGGGGGCGCACGTTaGAGCCATTATAGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSRGWGPGFSLFTQVHSLHGGAR*SHYSGP
Trigger: CGGCCCGCTATAATGGCTTCAACGTGCGCCCCCGTG...CAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACGCAGCAGCTGCCCTTTaGAACGCCACACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHAAAAL*NATQPR
Trigger: CCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGC...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCGCAGCAGCTGCCCTTTaGAACGCCACACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AHHEGGGQASHCLHKYTAAAAAL*NATQPR
Trigger: CCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGC...GGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGCAGCAGCTGCCCTTTaGAACGCCACACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQAAAAL*NATQPR
Trigger: CCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGC...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp ACTAACCTTGCACGGTCCCCCAGCTCCCGAGGCCTCGATGTCTCGATGAACATGGTCTGCAGCCTGGGATaGGAGGCCAGAATTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TNLARSPSSRGLDVSMNMVCSLG*EARIWS
Trigger: GCTCCAAATTCTGGCCTCTCATCCCAGGCTGCAGAC...CATGTTCATCGAGACATCGAGGCCTCGGGAGCTGGGGGACCGTGCAAGGTTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp CACAGCTCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGGGTCCCTGGGAAATaGGTGCAGGCAACAAGAGGG +
Preference number: 4 (lower is better)
Translates to: HSSHHLCNAKRKMAMGPHRVPGK*VQATRG
Trigger: CCCTCTTGTTGCCTGCACTCATTTCCCAGGGACCCT...GTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCACCACCAGAGTTGGGCTaGGATGGTGATTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPPPELG*DGDYVG
Trigger: ACCCACATAATCACCATCTCAGCCCAACTCTGGTGG...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCGCAGCTAGCTGGTGGTaGATAAGGGAGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGAASWW*IREAAP
Trigger: TGGGGCTGCCTCCCTTATTCACCACCAGCTAGCTGC...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGTGGACACTTTGGTGTaGCGGGGGCAAGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTVDTLV*RGQGWG
Trigger: CCCCCAACCTTGCCCCCGGCACACCAAAGTGTCCAC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGTGGACACTTTGGTGTaGCGGGGGCAAGGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAVDTLV*RGQGWG
Trigger: CCCCCAACCTTGCCCCCGGCACACCAAAGTGTCCAC...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGTTCTCTGCTCATCCTTaGAGCCAATGCAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEFSAHP*SQCRPP
Trigger: AGGGGGCCTGCATTGGCTGCAAGGATGAGCAGAGAA...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGCTGGACAGAATCGTGTaGAGCAGGTGCCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRLDRIV*SRCPTF
Trigger: GAAGGTAGGGCACCTGCTGCACACGATTCTGTCCAG...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGAGGGGACTGGCACCTaGTCCCTCCACCAATCCCAG +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQEGTGT*SLHQSQ
Trigger: CTGGGATTGGTGGAGGGAGCAGGTGCCAGTCCCCTC...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAGCTGTCCCCACCAAATaGTCCAGAAGGAGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRAVPTK*SRRSPV
Trigger: CACAGGGCTCCTTCTGGAGCATTTGGTGGGGACAGC...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCTGGCACTGCAGTGCTaGCCGAGTTCCAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLLALQC*PSSRPL
Trigger: AAGAGGCCTGGAACTCGGGCAGCACTGCAGTGCCAG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGACTCCTGGCACTGCAGTaGTGCCCGAGTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRLLALQ*CPSSRP
Trigger: AGGCCTGGAACTCGGGCAGCACTGCAGTGCCAGGAG...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGCCTGCCTCCTGGCACTaGAGTGCTGCCCGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTPASWH*SAARVP
Trigger: TGGAACTCGGGCAGCACTGCAGTGCCAGGAGGCAGG...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGCACCAGGCTCACTTGTaGTGGGCACGAGCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVHQAHL*WARAGG
Trigger: ACCTCCCGCTCGTGCCCAGCACAAGTGAGCCTGGTG...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCTGGTGGTTCTATTCTaGAGGCAAGGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDLVVLF*RQGQEP
Trigger: TGGTTCCTGGCCTTGCCTGCAGAATAGAACCACCAG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGTTGTTAGCCAAACTCCCTaGAGTTGTTTGGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RPGVRVQSPFVPGPHQEVVSQTP*SCLAGD
Trigger: GTCTCCTGCCAAACAACTGCAGGGAGTTTGGCTAAC...AACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAMYSSS*PFSTRR
Trigger: CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACAT...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCTGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ERLGFWVRAFCRVQSKLSSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...AGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GGAAGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSQMEMRGLGRVVESWSSSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...GGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACCATCTTCACGGCCGGTaGTTCATCCCCGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: RSKRPELKLQGIFNSACHHLHGR*FIPARR
Trigger: CCGCCTCGCGGGGATGAAGCACCGGCCGTGAAGATG...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACACATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QVSMLITRVGARLLIVYTHAWPA*TICAWA
Trigger: AGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATG...TGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGCTCTTTCACCACACATaGCTGGCCCGCATGCACGAT +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWLFHHT*LARMHD
Trigger: ATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAG...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACAGCGGCCGCCCTGCGTaGGTGCAATACGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: RSKRPELKLQGIFNSACHSGRPA*VQYARC
Trigger: GCATCGAGCGTATTGCACGCACGCAGGGCGGCCGCT...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTCACCTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAGCGGCCGCCCTGCGTaGGTGCAATACGCTCGATGC +
Preference number: 4 (lower is better)
Translates to: SHLPQKKLLMKSRPSHGQSGRPA*VQYARC
Trigger: GCATCGAGCGTATTGCACGCACGCAGGGCGGCCGCT...TTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGACGCCGTTCTCAGCCTTaGAGTAGTAGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGRRSQP*SSSGRP
Trigger: AGGGCGGCCGCTACTACTGCAAGGCTGAGAACGGCG...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGATGGCCTTGTCTGGGATaGCGCACACGTTACGCACAG +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRWPCLG*RTRYAQ
Trigger: CTGTGCGTAACGTGTGCGGCATCCCAGACAAGGCCA...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGGCCCATGGGACCACTaGAGCTGGGGGAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPGPWDH*SWGRGS
Trigger: TGATCCCCTCCCCCAGCTGCAGTGGTCCCATGGGCC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGCCAGAGTCCCGGGCCTaGACTGAAGGGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREPESRA*TEGMLR
Trigger: CCTCAGCATCCCTTCAGTGCAGGCCCGGGACTCTGG...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGGCAGCCGCTTGGACATaGGTGCCGGCTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVAAAWT*VPACHS
Trigger: AGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGC...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGCAGCTCAGGATCATTaGGGGTCACCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLAAQDH*GSPAAA
Trigger: AGCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTAACTGCACGTTCAGCTaGACCTGGGCCTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKANCTFS*TWASRG
Trigger: CCCCCGTGAGGCCCAGGTGCAGCTGAACGTGCAGTT...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTAACTGCACGTTCAGCTaGACCTGGGCCTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: QGGGVLVIHSHLPQKKLLNCTFS*TWASRG
Trigger: CCCCCGTGAGGCCCAGGTGCAGCTGAACGTGCAGTT...AAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGAACTGCACGTTCAGCTaGACCTGGGCCTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVNCTFS*TWASRG
Trigger: CCCCCGTGAGGCCCAGGTGCAGCTGAACGTGCAGTT...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACAACACAGCCGAGGCGATaGGCTGGGGGCTGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: NRSVCSSRGWGPGFSLFTTQPRR*AGGCLA
Trigger: TGCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGT...TGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACACTCGTAGCTGCCGCTaGTGTCGCGAGTTACGGCGT +
Preference number: 4 (lower is better)
Translates to: EMRGLGRVVESWSSTLTYTRSCR*CRELRR
Trigger: ACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGT...GTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCGCTGCACTCGTAGCTaGCGCTGCTGTCGCGAGTTA +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLRCTRS*RCCREL
Trigger: TAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGGGAGCAGACCAGGATaGAGGTCCTCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEGSRPG*RSSLSR
Trigger: CCTGGACAGTGAGGACCTGCATCCTGGTCTGCTCCC...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGCTTCTGGCTCCCTTCTaGCAAAGCCACCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRLLAPF*QSHQAG
Trigger: TCCAGCCTGGTGGCTTTGCCAGAAGGGAGCCAGAAG...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCCTCACCCCAGAAAATaGGCTGGCCACCGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENPHPRK*AGHRSP
Trigger: GGGGGAGCGGTGGCCAGCCCATTTTCTGGGGTGAGG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGGTAAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGCCTCACCCCAGAAAATaGGCTGGCCACCGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RVKSEAHHECSKDKAYVAPHPRK*AGHRSP
Trigger: GGGGGAGCGGTGGCCAGCCCATTTTCTGGGGTGAGG...CGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTGTCAGGTCCTGGGCCTTCTCTCTCCCATaGATGGCTAGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FWVRAFCRVQSKLSVRSWAFSLP*MARWGL
Trigger: GAGCCCCCACCTAGCCATCCATGGGAGAGAGAAGGC...CCAGGACCTGACAGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGGTGGTGCCAGGCCAGTaGTTCCTGCTGTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRVVPGQ*FLLSGE
Trigger: TTCTCCTGACAGCAGGAACCACTGGCCTGGCACCAC...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTGTGGTGCCAGGCCAGTaGTTCCTGCTGTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: TWRWHCRGDSLTLHGPPAVVPGQ*FLLSGE
Trigger: TTCTCCTGACAGCAGGAACCACTGGCCTGGCACCAC...AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCGAGGAAGCACCCAGGTaGTGCCAGGCCAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGEEAPR*CQASGS
Trigger: GGAACCACTGGCCTGGCACCACCTGGGTGCTTCCTC...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGGGGGCTATTCATCTCTaGTGCTCCAATGCCTACCCC +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWGAIHL*CSNAYP
Trigger: GGGGTAGGCATTGGAGCACCAGAGATGAATAGCCCC...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGGGGTTGCGGGGCAAATaGATTGGAAGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRGLRGK*IGRSSE
Trigger: CTCAGAGGACCTTCCAATCCATTTGCCCCGCAACCC...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGTGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWCHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGACCTTGTCCCCGGCAGTaGAAGGGGATCAGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRPCPRQ*KGISAR
Trigger: TCTGGCGCTGATCCCCTTCCACTGCCGGGGACAAGG...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTTGGTCCACCGTACCTaGGGTCGAGGGTGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEALVHRT*GRGCPV
Trigger: AACAGGGCACCCTCGACCCCAGGTACGGTGGACCAA...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTTTGGTCCACCGTACCTaGGGTCGAGGGTGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCLVHRT*GRGCPV
Trigger: AACAGGGCACCCTCGACCCCAGGTACGGTGGACCAA...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTCGCTACCTGCCGTCTTaGTCCACCGTACCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: YREQVSMLITRVGARLLIRYLPS*STVPGV
Trigger: GACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCG...AATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCCATTGTCCTGGCTGTaGGATAGGGTATCGGAACCC +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFPLSWL*DRVSEP
Trigger: GGGTTCCGATACCCTATCCCACAGCCAGGACAATGG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCATCAACCCCATTGTCCTaGCTGTGGGATAGGGTATCG +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPSTPLS*LWDRVS
Trigger: CGATACCCTATCCCACAGCCAGGACAATGGGGTTGA...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCCTGGCAGGTGTAGCTaGCATAGTCCTGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGPGRCS*HSPGAA
Trigger: TGCGGCCCCAGGACTATGCCAGCTACACCTGCCAGG...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGCCTGGCAGGTGTAGCTaGCATAGTCCTGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREPGRCS*HSPGAA
Trigger: TGCGGCCCCAGGACTATGCCAGCTACACCTGCCAGG...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTTGGGACCACTGCAGCTaGGGGAGGGGATCACCGCCT +
Preference number: 4 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFWDHCS*GRGSPP
Trigger: AGGCGGTGATCCCCTCCCCCAGCTGCAGTGGTCCCA...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCATGGGACCACTGCAGCTaGGGGAGGGGATCACCGCCT +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPWDHCS*GRGSPP
Trigger: AGGCGGTGATCCCCTCCCCCAGCTGCAGTGGTCCCA...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGTTGGTTGCCCACATTGTTaGTGGCTGTGCAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RPGVRVQSPFVPGPHQEVGCPHC*WLCSCS
Trigger: ACTACAACTGCACAGCCACCAACAATGTGGGCAACC...AACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTCACCAGCAGCCGCTTaGACATGCGTGCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: REQVSMLITRVGARLLIVSPAAA*TCVPAC
Trigger: GCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGA...AACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGATCACCAGCAGCCGCTTaGACATGCGTGCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGSPAAA*TCVPAC
Trigger: GCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGA...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAGGGCACGGGTGCCCCTaGGAAAGAAGCCATGCACAG +
Preference number: 4 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGGHGCP*ERSHAQ
Trigger: CTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCC...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGACGTTCAGCTGCACCTaGGCCTCACGGGGGCGCACG +
Preference number: 4 (lower is better)
Translates to: GGVLVIHSHLPQKKLLMKTFSCT*ASRGRT
Trigger: CGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACGT...CTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTTCTCCACGATGAGCCTTGCACGTCCTGGGAACTaGGCTCCACCTCCGGCGGGA +
Preference number: 4 (lower is better)
Translates to: QFSLTHHPSCGNFSTMSLARPGN*APPPAG
Trigger: TCCCGCCGGAGGTGGAGCCCAGTTCCCAGGACGTGC...AAGGCTCATCGTGGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTTCTCCACGATGAGCCTTGCCTGGCGCACGTCCTaGGAACTGGGCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QFSLTHHPSCGNFSTMSLAWRTS*ELGSTS
Trigger: GGAGGTGGAGCCCAGTTCCCAGGACGTGCGCCAGGC...AAGGCTCATCGTGGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp GGGTATAGCCACAGATCTTCTCATCCTCAAAGTGGCAGGTGTTGTCTGAAAGGTGCCGAGGCGATGCGCTaGGGGCTGCCTCGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GYSHRSSHPQSGRCCLKGAEAMR*GLPRSS
Trigger: GCTGCTGCGAGGCAGCCCCCAGCGCATCGCCTCGGC...ACCTTTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGTGGCTATACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCTTCTTGGACAGCTTGTaGCTGCGGGTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGFLDSL*LRVGLG
Trigger: CCCCAACCCCACCCGCAGCCACAAGCTGTCCAAGAA...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434837.8
CDS-3UTR CCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTTCTTGGACAGCTTGTaGCTGCGGGTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGFLDSL*LRVGLG
Trigger: CCCCAACCCCACCCGCAGCCACAAGCTGTCCAAGAA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
CDS-3UTR CCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGACAGCTGCAGACACTGTaGTGGGAGGGTGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGQLQTL*WEGGHL
Trigger: GAGGTGGCCACCCTCCCACCACAGTGTCTGCAGCTG...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGACCAGAGCAAAGACCCTaGGAATACTCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRPEQRP*EYSPAP
Trigger: AGGGGCTGGGGAGTATTCCCAGGGTCTTTGCTCTGG...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGCCAGAGCAAAGACCCTaGGAATACTCCCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGPEQRP*EYSPAP
Trigger: AGGGGCTGGGGAGTATTCCCAGGGTCTTTGCTCTGG...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACATCCCCAGGAAAGAGTaGTCCTTCTGCCCCAACACA +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDIPRKE*SFCPNT
Trigger: TGTGTTGGGGCAGAAGGACCACTCTTTCCTGGGGAT...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTGAGATGGTGATTATGTaGGTGGCTGGGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFEMVIM*VAGRMA
Trigger: CGCCATCCTCCCAGCCACCCACATAATCACCATCTC...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGGTGGCGGGGTGGGCTaGGGTGGTCAGACATGTGGG +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCGGGVG*GGQTCG
Trigger: CCCACATGTCTGACCACCCCAGCCCACCCCGCCACC...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCTTTGGTGGAGATGGCTaGAAGGCTGGACTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASFGGDG*KAGLSW
Trigger: CCAGCTGAGTCCAGCCTTCCAGCCATCTCCACCAAA...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGTTTGGTGGAGATGGCTaGAAGGCTGGACTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRFGGDG*KAGLSW
Trigger: CCAGCTGAGTCCAGCCTTCCAGCCATCTCCACCAAA...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGCTTCTGGTGCTTTGGTaGAGATGGCTGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRLLVLW*RWLEGW
Trigger: CCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAG...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCACGTAGGAGTAGTTCTTaGACAGCTTGTGGCGGAGAC +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPRRSSS*TACGGD
Trigger: GTCTCCGCCACAAGCTGTCCAAGAACTACTCCTACG...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATAGGGCCCACTGGGGCTaGTGGGCACATGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDRAHWG*WAHGPA
Trigger: AGCAGGCCCATGTGCCCATCAGCCCCAGTGGGCCCT...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAAGGAGTCCCAGAGTCTaGCCAAGGGAGGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQRSPRV*PREGLH
Trigger: ATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACAGGTGGGGGCTCAGGTaGTGTCAAGGAGGAAAGATC +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHRWGLR*CQGGKI
Trigger: GATCTTTCCTCCTTGACATCACCTGAGCCCCCACCT...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCAGTCATCCATAGGGGATaGAAGGTGGAATTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPVIHRG*KVEFQA
Trigger: GGCCTGAAATTCCACCTTTCATCCCCTATGGATGAC...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCAGCATGAGCAACACTaGTACAGAGATGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDQHEQH*YRDAGS
Trigger: TGAGCCAGCATCTCTGTATCAGTGTTGCTCATGCTG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAGGACCGGGATGGCCTTaGCCACCGCATTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QVSMLITRVGARLLIVYTGPGWP*PPHCAG
Trigger: ACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCC...TGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: GQYAHHEGGGQASHCLHKVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...CTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGGCCTCGATGTCTCGATaGACATGTAGTAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRASMSR*TCSSPQ
Trigger: CTGAGGGCTACTACATGTTCATCGAGACATCGAGGC...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGTGCGCAGCGTCTCGTTaGACACCGATGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLCAASR*TPMSPG
Trigger: TCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCA...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACACCGGCTTGCCATTCTTaGACCACTGGTAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTPACHS*TTGRSP
Trigger: AGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCGG...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGCTCTAGGCTGCTGGTaGCTGCGGGCAGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENALGCW*LRAAQD
Trigger: ATCCTGAGCTGCCCGCAGTCACCAGCAGCCTAGAGC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACTACCCTTGGGCACACTaGTGGTGGGCGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHYPWAH*WWAALS
Trigger: AGACAGTGCCGCCCACCATCAGTGTGCCCAAGGGTA...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCACCGCACCAGGAGGTTaGGGGAGCCGATGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGTAPGG*GSRCVS
Trigger: GGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGT...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGCAGCTAGCTGGTGGTaGATAAGGGAGGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTAASWW*IREAAP
Trigger: TGGGGCTGCCTCCCTTATTCACCACCAGCTAGCTGC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCCACTGCCTATCCCCATaGCCTTGGCAAGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGHCLSP*PWQAHL
Trigger: GAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTG...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACATTCTGGAAGGGCCCACTACCGCACCAGGAGGTTaGGGGAGCCTGGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LKLQGIFNSACHILEGPTTAPGG*GSLGKP
Trigger: TGGCTTCCCCAGGCTCCCTCAACCTCCTGGTGCGGT...AGTGGGCCCTTCCAGAATGTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR GCA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCTTATTGGGATCCGTCTaGTTCCGGGGACACTCCCCC +
Preference number: 4 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGLLGSV*FRGHSP
Trigger: GGGGGAGTGTCCCCGGAAGCAGACGGATCCCAATAA...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGACCCTGGGTTGGCGGATaGCATTCAGGCAAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGPWVGG*HSGKSP
Trigger: AGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGG...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAGGACAAGGCCTATGTTaGGCCGAGGTCCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGGQGLC*AEVPGL
Trigger: CAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCC...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGGACAAGGCCTATGTTaGGCCGAGGTCCCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDGQGLC*AEVPGL
Trigger: CAACCCAGGGACCTCGGCGCAACATAGGCCTTGTCC...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGGTTTGCACACACTCCTaGCCAACAATGTACCCACGG +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRVCTHS*PTMYPR
Trigger: CCGTGGGTACATTGTTGGGCAGGAGTGTGTGCAAAC...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGGTTTGCACACACTCCTaGCCAACAATGTACCCACGG +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEVCTHS*PTMYPR
Trigger: CCGTGGGTACATTGTTGGGCAGGAGTGTGTGCAAAC...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGCTGGCACTGCAGTGCTaGCCGAGTTCCAGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVLALQC*PSSRPL
Trigger: AAGAGGCCTGGAACTCGGGCAGCACTGCAGTGCCAG...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGCGGAGCAGCCAGGGTTaGGGGGCAAATGGATTGGAA +
Preference number: 4 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVRSSQG*GANGLE
Trigger: TTCCAATCCATTTGCCCCGCAACCCTGGCTGCTCCG...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGCCACTGGGGAGATGTaGTGGATCCAGCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENATGEM*WIQPAW
Trigger: CCAGGCTGGCTGGATCCAGCACATCTCCCCAGTGGC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQMYSSS*PFSTRR
Trigger: CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACAT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCATGTACTCCAGCAGCTaGCCCTTCTCCACACGCCGG +
Preference number: 4 (lower is better)
Translates to: AHHEGGGQASHCLHKYTAMYSSS*PFSTRR
Trigger: CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACAT...GGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTTGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: TWRWHCRGDSLTLHGPPAWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCTCTTTCACCACACATaGCTGGCCCGCATGCACGAT +
Preference number: 4 (lower is better)
Translates to: NERTRQGGGVLVIHSHLPLFHHT*LARMHD
Trigger: ATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAG...GGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCCTGTTACAAGGCACTaGAGCATGAGGGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLPVTRH*SMRVSP
Trigger: GGGGGACACCCTCATGCTGCAGTGCCTTGTAACAGG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CCGAGGCCTCGATGTCTCGATGAACATGTAGTAGCCCTCAGGGGTGCCACTTATACCTGGGGTCGAGGGTaGCCTGTTACAAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: PRPRCLDEHVVALRGATYTWGRG*PVTRHC
Trigger: GCAGTGCCTTGTAACAGGGCACCCTCGACCCCAGGT...ATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCGCCGTTCTCAGCCTTaGAGTAGTAGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENRRSQP*SSSGRP
Trigger: AGGGCGGCCGCTACTACTGCAAGGCTGAGAACGGCG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGCCTTGTCTGGGATaGCGCACACGTTACGCACAG +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAWPCLG*RTRYAQ
Trigger: CTGTGCGTAACGTGTGCGGCATCCCAGACAAGGCCA...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CACAGCTCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACCCTGTCAGCAGACACTaGACCGTCACATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: HSSHHLCNAKRKMAMGPHPVSRH*TVTFSP
Trigger: TGGGGAGAATGTGACGGTGCAGTGTCTGCTGACAGG...GTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGGCAGCCGCTTGGACATaGGTGCCGGCTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREAAAWT*VPACHS
Trigger: AGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGC...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGCAGCTCAGGATCATTaGGGGTCACCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDAAQDH*GSPAAA
Trigger: AGCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGC...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGCAGCTCAGGATCATTaGGGGTCACCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQAAQDH*GSPAAA
Trigger: AGCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGC...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACCCCGCACCTCGCATTaGAGCTCGGCAGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTPRTSH*SSAGDP
Trigger: GGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGG...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTACACAGCCGAGGCGATaGGCTGGGGGCTGCCTCGCA +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCTQPRR*AGGCLA
Trigger: TGCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGT...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAACTCGTAGCTGCCGCTaGTGTCGCGAGTTACGGCGT +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGTRSCR*CRELRR
Trigger: ACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGT...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAACATCGTTGGAGACGCTaGACTCGTAGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQHRWRR*TRSCRC
Trigger: GCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATG...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCATCGTTGGAGACGCTaGACTCGTAGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SQMEMRGLGRVVESWSSTHRWRR*TRSCRC
Trigger: GCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATG...AGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCATCGTTGGAGACGCTaGACTCGTAGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGHRWRR*TRSCRC
Trigger: GCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATG...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCGGGGGTCTCCTGTTGTaGTTTTACCTTGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSGGLLL*FYLGGG
Trigger: CCCGCCACCAAGGTAAAAGCACAACAGGAGACCCCC...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCGGGGGTCTCCTGTTGTaGTTTTACCTTGGTGGCGGG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGGGLLL*FYLGGG
Trigger: CCCGCCACCAAGGTAAAAGCACAACAGGAGACCCCC...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTATGGCCCACTCTGCCCTaGCAACACACACGGCTGACG +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLWPTLP*QHTRLT
Trigger: CGTCAGCCGTGTGTGTTGGCAGGGCAGAGTGGGCCA...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCGGCCCTGTTGGCCTTTaGATATTCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASGPVGL*IFCSLC
Trigger: GCAGAGGGAACAGAATATGCAAAGGCCAACAGGGCC...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCAGGGTCACTTTGCAAATaGTCATCACTGCCTATCCCC +
Preference number: 4 (lower is better)
Translates to: PISGVPESDQGRGSMSAPGSLCK*SSLPIP
Trigger: GGGGATAGGCAGTGATGAGCATTTGCAAAGTGACCC...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGTTTGGATTTCTGAGTaGCCATCCCCCTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHVWISE*PSPSLC
Trigger: ACACAGTGAGGGGGATGGGCACTCAGAAATCCAAAC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGTCACCACCACTTTATTaGGATCCGTCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDESPPLY*DPSASG
Trigger: CCCGGAAGCAGACGGATCCCAATAAAGTGGTGGTGA...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATAGCTGTGGGCTGGACTaGCAGGGGGCTCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYSCGLD*QGAPLP
Trigger: GGGCAGTGGAGCCCCCTGCCAGTCCAGCCCACAGCT...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGTGCGTGTGTGCAAGTaGAACAGCTGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLVRVCK*NSCLQG
Trigger: GCCCTGGAGACAGCTGTTCCACTTGCACACACGCAC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGCCGAGGTCCCTGGGTTaGCGGATGCCATTCAGGCAA +
Preference number: 4 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVPRSLG*RMPFRQ
Trigger: TTGCCTGAATGGCATCCGCCAACCCAGGGACCTCGG...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGTGTCTGCCCCACTTCTaGCTCCCTTCTGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPECLPHF*LPSGKA
Trigger: GGCTTTGCCAGAAGGGAGCCAGAAGTGGGGCAGACA...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTGTCAGGTCCTGGTGTCTGCCCCACTTCTaGCTCCCTTCTGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: FWVRAFCRVQSKLSVRSWCLPHF*LPSGKA
Trigger: GGCTTTGCCAGAAGGGAGCCAGAAGTGGGGCAGACA...CCAGGACCTGACAGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTCTTGTCTCCTGGACGTaGGACAGTCACAGAGCTCGC +
Preference number: 4 (lower is better)
Translates to: ERLGFWVRAFCRVQSKLSLVSWT*DSHRAR
Trigger: GCGAGCTCTGTGACTGTCCCACGTCCAGGAGACAAG...AGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp ACTAACCTTGCACGGTCCCCCAGCTCCCGAGGCCTCGATGTCTCGATGAACATGCATTCTAGAAGGGGCTaGGCCTTCTCTCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: TNLARSPSSRGLDVSMNMHSRRG*AFSLPW
Trigger: CCATGGGAGAGAGAAGGCCCAGCCCCTTCTAGAATG...CATGTTCATCGAGACATCGAGGCCTCGGGAGCTGGGGGACCGTGCAAGGTTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAATGATCACACAGGCCTaGCAGGGGGAGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQMITQA*QGEMGS
Trigger: GCTGCCCATCTCCCCCTGCCAGGCCTGTGTGATCAT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCCACCGGGCAATGGAGTaGTTTCCACACCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSHRAME*FPHQAH
Trigger: GTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTG...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCACTGGGGAGATGTGCTaGATCCAGCCAGCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSTGEMC*IQPAWS
Trigger: AGACCAGGCTGGCTGGATCCAGCACATCTCCCCAGT...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACACTGCTATACAGCACCTaGCCCCCGGAGTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTLLYST*PPESFS
Trigger: TGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAG...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCCTCCCTGCAGTTGTTTaGCAGGAGACCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGILPAVV*QETSGA
Trigger: TGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAG...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTGTCAGGTCCTGGCTCCCTGCAGTTGTTTaGCAGGAGACCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FWVRAFCRVQSKLSVRSWLPAVV*QETSGA
Trigger: TGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAG...CCAGGACCTGACAGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCGAGCGTTTGGGGTTCTaGGTGAGGGCATTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: AHHEGGGQASHCLHKYTAERLGF*VRAFCR
Trigger: GCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC...GGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGAGCGTTTGGGGTTCTaGGTGAGGGCATTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAERLGF*VRAFCR
Trigger: GCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCTGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGCHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGACGCCCCGCGGGAATCTaGAGAGCAATTCCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRRPAGI*RAIPGK
Trigger: CTTGCCTGGAATTGCTCTCCAGATTCCCGCGGGGCG...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCACCACACATGCCTaGCCCGCATGCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIFTTHA*PACTIC
Trigger: GCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAA...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTCACCACACATGCCTaGCCCGCATGCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLFTTHA*PACTIC
Trigger: GCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAA...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTGGTCCACCGTACCTaGGGTCGAGGGTGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTLVHRT*GRGCPV
Trigger: AACAGGGCACCCTCGACCCCAGGTACGGTGGACCAA...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGACATCGCTCACCGTCTaGTGCACCGTCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLTSLTV*CTVSIG
Trigger: GCCAATGCTGACGGTGCACCAGACGGTGAGCGATGT...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGGATAGCTTCAGGTCCTaGCCCAGCTGGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRDSFRS*PSWMFS
Trigger: TGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATC...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGGCACTGCATCCACGTaGCACGATAGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEGTAST*HDSFRS
Trigger: GGACCTGAAGCTATCGTGCCACGTGGATGCAGTGCC...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACCCGAGCCCACATCGTTaGAGACGCTGCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDPSPHR*RRCTRS
Trigger: GCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGG...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCAGCTGCAGACACTGTaGTGGGAGGGTGGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENQLQTL*WEGGHL
Trigger: GAGGTGGCCACCCTCCCACCACAGTGTCTGCAGCTG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAGACCCTCCCGGTCTTTaGGGAAACCAAGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRDPPGL*GNQEDE
Trigger: CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTC...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGGTGCTTCCCGGCCTTTaGAAGCATGGAGGACTCCGC +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREVLPGL*KHGGLR
Trigger: GCGGAGTCCTCCATGCTTCCAAAGGCCGGGAAGCAC...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACTTGAGGTCTCAGGGCTaGTGCAGCCCCTTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RSKRPELKLQGIFNSACHLRSQG*CSPFPP
Trigger: GGGAGGGAAGGGGCTGCACCAGCCCTGAGACCTCAA...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAGTTGTGCTTTTACCTTaGTGGCGGGGTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGVVLLP*WRGGLG
Trigger: CCCCAGCCCACCCCGCCACCAAGGTAAAAGCACAAC...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTTGCACACAAGTTCACTaGGAGCAGACCAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFCTQVH*EQTRMQ
Trigger: CTGCATCCTGGTCTGCTCCCAGTGAACTTGTGTGCA...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGGGGAGAGGGAGCCCTTaGTCTTGTAATCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRGRGSP*SCNLSF
Trigger: GAAGCTCAGATTACAAGACCAAGGGCTCCCTCTCCC...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGTTCTCATCCTCAAAGTaGCAGGTGTTGTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: LRDQACVSRAPLFRDRTRFSSSK*QVLSHS
Trigger: GCTATGAGACAACACCTGCCACTTTGAGGATGAGAA...CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGCAGGATCCCTTTATTaGGATCCGTCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTAGSLY*DPSASG
Trigger: CCCGGAAGCAGACGGATCCCAATAAAGGGATCCTGC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650466.1
CDS-3UTR CCA 90 bp TCCAGACCCAGCCACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGAGGACTCGGCAGGGTaGTGGAGTCCTGGTCATCCA +
Preference number: 4 (lower is better)
Translates to: SRPSHGQNDLCKWFGSPSEDSAG*WSPGHP
Trigger: TGGATGACCAGGACTCCACCACCCTGCCGAGTCCTC...ACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR CAA 72 bp TGGACAGAATCGTGTGCAGCAGGTGCCCTACCTTCCTaGTCTCCTGGACGTGGGACAGTCACAGAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: WTESCAAGALPS*SPGRGTVTELA
Trigger: TGCGAGCTCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACACGATTCTGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 72 bp CCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTaGGGCCACTCCCCTTCCCCACTCTGGGCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PKTGSTQTSCVT*GHSPSPLWASA
Trigger: AGCTGAAGCCCAGAGTGGGGAAGGGGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTTGCCCTTATTGCCACTaGGAGACCAGGCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKACPYCH*ETRRAC
Trigger: ACACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCA...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGATGCCCTTATTGCCACTaGGAGACCAGGCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGCPYCH*ETRRAC
Trigger: ACACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCA...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CCAGCCACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCATGCCCTTATTGCCACTaGGAGACCAGGCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: PATGKMICANGLGAPVDACPYCH*ETRRAC
Trigger: ACACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCA...TGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR TCA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCAGGTGGGGGCTCAGGTaGTGTCAAGGAGGAAAGATC +
Preference number: 4 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGRWGLR*CQGGKI
Trigger: GATCTTTCCTCCTTGACATCACCTGAGCCCCCACCT...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGGATGGAAGTGTATGCTaGGAACCTGGAGCGACTCAT +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRDGSVC*EPGATH
Trigger: ATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATC...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGCTCTGTGTAGTGGATaGTGCGGGAGGCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRALCSG*CGRPCH
Trigger: GTGACATGGCCTCCCGCATCATCCACTACACAGAGC...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAGCCTCGATGTCTCGATaGACATGTAGTAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRASMSR*TCSSPQ
Trigger: CTGAGGGCTACTACATGTTCATCGAGACATCGAGGC...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TTGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCGATGTGTTTCCCGTACATGGCCTCGATGTCTCGATaGACATGTAGTAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LFRDRTRRLREPMCFPYMASMSR*TCSSPQ
Trigger: CTGAGGGCTACTACATGTTCATCGAGACATCGAGGC...CATGTACGGGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp TCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACAAGGCACTGCAGCATaGGGGTGTCCCCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SVCSSRGWGPGFSLFTQVQGTAA*GCPPPG
Trigger: TCCGGGAGGGGGACACCCTCATGCTGCAGTGCCTTG...TACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp GTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATCAAGGCACTGCAGCATaGGGGTGTCCCCCTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VSRTCGRRRRHSRTWRWHQGTAA*GCPPPG
Trigger: TCCGGGAGGGGGACACCCTCATGCTGCAGTGCCTTG...ATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp TACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTCAGGCGGGTTGGAGTTaGCAGTACAGCGCAGGAACA +
Preference number: 4 (lower is better)
Translates to: YREQVSMLITRVGARLLIQAGWS*QYSAGT
Trigger: TGTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTG...AATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp TCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTAGCACTGAAGGGATGCTaGGGGTGCCACCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SVCSSRGWGPGFSLFTQVALKGC*GCHPGP
Trigger: TGGCCCAGGGTGGCACCCTCAGCATCCCTTCAGTGC...TACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGATCGCACCAGCAGGTTaGCAGTCTTCTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWIAPAG*QSSWQG
Trigger: ACCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGAT...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTATCGCACCAGCAGGTTaGCAGTCTTCTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCIAPAG*QSSWQG
Trigger: ACCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGAT...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCCCGGCTTGCCATTCTTaGACCACTGGTAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGPACHS*TTGRSP
Trigger: AGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCGG...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTGCTCTAGGCTGCTGGTaGCTGCGGGCAGCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VSMLITRVGARLLIVYTSALGCW*LRAAQD
Trigger: ATCCTGAGCTGCCCGCAGTCACCAGCAGCCTAGAGC...ACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCATACCCTTGGGCACACTaGTGGTGGGCGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPYPWAH*WWAALS
Trigger: AGACAGTGCCGCCCACCATCAGTGTGCCCAAGGGTA...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCGCAGCAGCTGCCCTTTaGAACGCCACACAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SVQMVWEPQWMQNLLSHSAAAAL*NATQPR
Trigger: CCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGC...GGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp CTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTACCGCACCAGGAGGTTaGGGGAGCCGATGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LITRVGARLLIVYTSTQPTAPGG*GSRCVS
Trigger: GGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGT...AGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGGGGAAACCAAGAGGATaGGCACATGAGAACATGCTG +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWGKPRG*AHENML
Trigger: CAGCATGTTCTCATGTGCTCATCCTCTTGGTTTCCC...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGAGGTTCTTGGTCTTGTAATCTaGGCTTCAGTTTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: RPGVRVQSPFVPGPHQEVLGLVI*ASVSPS
Trigger: AGATGGGGAAACTGAAGCTCAGATTACAAGACCAAG...AACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCGAAGCCAAATGGAAATaGGAGGACTCGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGEAKWK*EDSAGW
Trigger: CCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTC...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR GCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGGCACATGGGCCTGCTaGCACACATTGCCCTTATTG +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEGTWAC*HTLPLL
Trigger: CAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCC...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCATGGGCACATGGGCCTaGTGCCACACATTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIMGTWA*CHTLPL
Trigger: TAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCAT...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCATGGGCACATGGGCCTaGTGCCACACATTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSMGTWA*CHTLPL
Trigger: TAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCAT...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACGAGTGTGTGCGTGTGTaGAAGTGGAACAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHECVRV*KWNSCL
Trigger: GAGACAGCTGTTCCACTTGCACACACGCACACACTC...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACTAACCTTGCACGGTCCCCCAGCTCCCGAGGCCTCGATGTCTCGATGAACATGGAGTGTGTGCGTGTGTaGAAGTGGAACAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TNLARSPSSRGLDVSMNMECVRV*KWNSCL
Trigger: GAGACAGCTGTTCCACTTGCACACACGCACACACTC...CATGTTCATCGAGACATCGAGGCCTCGGGAGCTGGGGGACCGTGCAAGGTTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCAAGTCCCCTGTCTTTaGAGTAAAGAAGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QAILKAGLSAPTETSSSIQVPCL*SKEGAG
Trigger: GCCAGCACCTTCTTTACTGCAAAGACAGGGGACTTG...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGGAAGCACACCACGAGTaGAGCAAGGACAAGGCCTAT +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACREAHHE*SKDKAY
Trigger: ATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTC...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGTCGTCCTCTGATCCCTaGCTCTCCCATCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWSSSDP*LSHLRS
Trigger: ACTCCTGAGATGGGAGAGGCAGGGATCAGAGGACGA...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCGTGTGCAGCAGGTaGCCTACCTTCCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGIVCSR*PTFLVS
Trigger: GGAGACAAGGAAGGTAGGGCACCTGCTGCACACGAT...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGATCGTGTGCAGCAGGTaGCCTACCTTCCTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEIVCSR*PTFLVS
Trigger: GGAGACAAGGAAGGTAGGGCACCTGCTGCACACGAT...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCTGGACAGAATCGTGTaGAGCAGGTGCCCTACCTTC +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLLDRIV*SRCPTF
Trigger: GAAGGTAGGGCACCTGCTGCACACGATTCTGTCCAG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CACAGCTCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACGTCTCCACCATCCAGTaGTCACTCTGGACAGAATCG +
Preference number: 4 (lower is better)
Translates to: HSSHHLCNAKRKMAMGPHVSTIQ*SLWTES
Trigger: CGATTCTGTCCAGAGTGAGCACTGGATGGTGGAGAC...GTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGGGTCCCTTCAAAGGGTaGACACTGAGGAGGGAAATA +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRGPFKG*TLRREI
Trigger: TATTTCCCTCCTCAGTGTGCACCCTTTGAAGGGACC...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAAGGCCCAAGACCCTGTaGTGGGTCCCTTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRRPKTL*WVPSKG
Trigger: ACCCTTTGAAGGGACCCAGCACAGGGTCTTGGGCCT...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTCCCCTCCTCCTTCACTaGCCCTGGGTGGAGAAGGGA +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCPLLLH*PWVEKG
Trigger: TCCCTTCTCCACCCAGGGGCAGTGAAGGAGGAGGGG...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTCATGTCAATCTCAGGTaGCTAACCCAGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: TWRWHCRGDSLTLHGPPAHVNLR*LTQDPR
Trigger: CCTTGGGTCCTGGGTTAGGCACCTGAGATTGACATG...AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGACACAGACCTGTGTTTaGACACACTCCTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRTQTCV*THSCPT
Trigger: TGTTGGGCAGGAGTGTGTGCAAACACAGGTCTGTGT...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGTCCAGGCCTCTTCTCTaGAGCTGTCCCCACCAAATG +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLSRPLL*SCPHQM
Trigger: CATTTGGTGGGGACAGCTGCAGAGAAGAGGCCTGGA...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAACCTAGACATTTACAGTaGCCACTGGCATACACTGAC +
Preference number: 4 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKPRHLQ*PLAYTD
Trigger: GTCAGTGTATGCCAGTGGGCACTGTAAATGTCTAGG...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TTGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCGATGTGTTTCCCGTACATGGAGACTTCCATAAGCTaGTATACAGCACCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LFRDRTRRLREPMCFPYMETSIS*YTAPGP
Trigger: GGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTC...CATGTACGGGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCACATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLGAPVDAESSIPLHSCSHAWPA*TICAWA
Trigger: AGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATG...TGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACACCTGGGGTCGAGGGTaGCCTGTTACAAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENTWGRG*PVTRHC
Trigger: GCAGTGCCTTGTAACAGGGCACCCTCGACCCCAGGT...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAACGCCGTTCTCAGCCTTaGAGTAGTAGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: RSVCSSRGWGPGFSLFTQRRSQP*SSSGRP
Trigger: AGGGCGGCCGCTACTACTGCAAGGCTGAGAACGGCG...TTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGATCGCTCACCGTCTGGTaGACCGTCAGCATTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRSLTVW*TVSIGS
Trigger: TGAGCCAATGCTGACGGTGCACCAGACGGTGAGCGA...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGTCTCCTGGTAGAAGTTaGCTCGCACATCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAESPGRS*LAHRSP
Trigger: CGGTGAGCGATGTGCGAGGCAACTTCTACCAGGAGA...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTCTCCTGGTAGAAGTTaGCTCGCACATCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGSPGRS*LAHRSP
Trigger: CGGTGAGCGATGTGCGAGGCAACTTCTACCAGGAGA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CCGAGGCCTCGATGTCTCGATGAACATGTAGTAGCCCTCAGGGGTGCCACTTATTGGCCTTGTCTGGGATaGCGCACACGTTACGCACAG +
Preference number: 4 (lower is better)
Translates to: PRPRCLDEHVVALRGATYWPCLG*RTRYAQ
Trigger: CTGTGCGTAACGTGTGCGGCATCCCAGACAAGGCCA...ATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCCCTGTCAGCAGACACTaGACCGTCACATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIPVSRH*TVTFSP
Trigger: TGGGGAGAATGTGACGGTGCAGTGTCTGCTGACAGG...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATGGCCCATGGGACCACTaGAGCTGGGGGAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDGPWDH*SWGRGS
Trigger: TGATCCCCTCCCCCAGCTGCAGTGGTCCCATGGGCC...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCAGAGTCCCGGGCCTaGACTGAAGGGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: MLITRVGARLLIVYTSTQPESRA*TEGMLR
Trigger: CCTCAGCATCCCTTCAGTGCAGGCCCGGGACTCTGG...CTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGCCGCTTGGACATGCGTaGCGGCTTGCCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEPLGHA*RLAILE
Trigger: TTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGG...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGCCGCTTGGACATGCGTaGCGGCTTGCCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWPLGHA*RLAILE
Trigger: TTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGG...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCACCGCTTGGACATGCGTaGCGGCTTGCCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPPLGHA*RLAILE
Trigger: TTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGG...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp ATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGAGGCAGCCGCTTGGACATaGGTGCCGGCTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: ITRVGARLLIVYTSTQPEAAAWT*VPACHS
Trigger: AGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGC...CTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp ACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACGCAGCTCAGGATCATTaGGGGTCACCAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: TGQYAHHEGGGQASHCLHAAQDH*GSPAAA
Trigger: AGCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGC...GTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGGAGGTCGGGCACGGGTaGCCCTGGGAAAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: GGVLVIHSHLPQKKLLMKEVGHG*PWERSH
Trigger: ATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTC...CTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp ATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACCCCGCACCTCGCATTaGAGCTCGGCAGGCGATCCC +
Preference number: 4 (lower is better)
Translates to: MICANGLGAPVDAESSIPPRTSH*SSAGDP
Trigger: GGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGG...TGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp ACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACACTCGTAGCTGCCGCTaGTGTCGCGAGTTACGGCGT +
Preference number: 4 (lower is better)
Translates to: TGQYAHHEGGGQASHCLHTRSCR*CRELRR
Trigger: ACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGT...GTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp ATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGAGCGCTGCACTCGTAGCTaGCGCTGCTGTCGCGAGTTA +
Preference number: 4 (lower is better)
Translates to: ITRVGARLLIVYTSTQPERCTRS*RCCREL
Trigger: TAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCG...CTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp ACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACCATCGTTGGAGACGCTaGACTCGTAGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TGQYAHHEGGGQASHCLHHRWRR*TRSCRC
Trigger: GCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATG...GTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTTCCCATATCTTCTGGTaGTTTGGTGGAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFSHIFW*FGGDGW
Trigger: CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGA...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCTGAAGCCCCAACACTaGCTGAAGCCAAGCTCTCAA +
Preference number: 4 (lower is better)
Translates to: NERTRQGGGVLVIHSHLPLKPQH*LKPSSQ
Trigger: TTGAGAGCTTGGCTTCAGGCAGTGTTGGGGCTTCAG...GGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GGAAGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCATGCTGGATGCTGGATaGAATGCCAGGCTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GSQMEMRGLGRVVESWSSMLDAG*NARLEW
Trigger: CCACTCCAGCCTGGCATTGCATCCAGCATCCAGCAT...GGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAACAATGTGGACACTTTaGTGTGCCGGGGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTTMWTL*CAGGKV
Trigger: AACCTTGCCCCCGGCACACCAAAGTGTCCACATTGT...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACCTTCTGGCTCCCTTCTaGCAAAGCCACCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHLLAPF*QSHQAG
Trigger: TCCAGCCTGGTGGCTTTGCCAGAAGGGAGCCAGAAG...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCCCAAGACCCTGTGCTaGGTCCCTTCAAAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGPKTLC*VPSKGA
Trigger: TGCACCCTTTGAAGGGACCCAGCACAGGGTCTTGGG...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCCTCCTTCACTGCCCCTaGGTGGAGAAGGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGLLHCP*VEKGTF
Trigger: GAAAGTTCCCTTCTCCACCCAGGGGCAGTGAAGGAG...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGGTAAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGGCCTTCTCTCTCCCATaGATGGCTAGGTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RVKSEAHHECSKDKAYVAAFSLP*MARWGL
Trigger: GAGCCCCCACCTAGCCATCCATGGGAGAGAGAAGGC...CGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACCACCGGGCAATGGAGTaGTTTCCACACCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHHRAME*FPHQAH
Trigger: GTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTG...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGAGGCACAGGGTGCCTTaGGAACCCCAAAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQRHRVP*EPQRGS
Trigger: GCTCCCTCTTTGGGGTTCCCAAGGCACCCTGTGCCT...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAATTTACAGTGCCCACTaGCATACACTGACACCCACA +
Preference number: 4 (lower is better)
Translates to: TSVGGAFGVLGEGILPRPIYSAH*HTLTPT
Trigger: TGTGGGTGTCAGTGTATGCCAGTGGGCACTGTAAAT...TGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGCTGATACAGAGATGCTaGCTCACAGGCACACACAGA +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRLIQRC*LTGTHR
Trigger: TCTGTGTGTGCCTGTGAGCCAGCATCTCTGTATCAG...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCCTGCTATACAGCACCTaGCCCCCGGAGTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGLLYST*PPESFS
Trigger: TGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAG...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCAGGGCTGTAGTACTTaGCTCTCCCAAGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLQGCST*LSQDWL
Trigger: GAGCCAGTCTTGGGAGAGCCAAGTACTACAGCCCTG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTTGTCCCCGGCAGTaGAAGGGGATCAGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: MLITRVGARLLIVYTSTQPCPRQ*KGISAR
Trigger: TCTGGCGCTGATCCCCTTCCACTGCCGGGGACAAGG...CTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCTTGGTCCACCGTACCTaGGGTCGAGGGTGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: CSSRGWGPGFSLFTQVHSLVHRT*GRGCPV
Trigger: AACAGGGCACCCTCGACCCCAGGTACGGTGGACCAA...GCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTAACACCGATGTCTCCTaGAACTTGTCCGAGGCGCTA +
Preference number: 4 (lower is better)
Translates to: RQGGGVLVIHSHLPQKKLNTDVS*NLSEAL
Trigger: TAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTT...AAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGGTGCACCGTCAGCATTaGCTCATCCAGGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEVHRQH*LIQVLH
Trigger: GTGCAGTACCTGGATGAGCCAATGCTGACGGTGCAC...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGTGCACCGTCAGCATTaGCTCATCCAGGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLVHRQH*LIQVLH
Trigger: GTGCAGTACCTGGATGAGCCAATGCTGACGGTGCAC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGACATCGCTCACCGTCTaGTGCACCGTCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASRETSLTV*CTVSIG
Trigger: GCCAATGCTGACGGTGCACCAGACGGTGAGCGATGT...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAACATCGCTCACCGTCTaGTGCACCGTCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQTSLTV*CTVSIG
Trigger: GCCAATGCTGACGGTGCACCAGACGGTGAGCGATGT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGGGTGATGGCCTTGTCTaGGATGCCGCACACGTTACG +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREGDGLV*DAAHVT
Trigger: CGTAACGTGTGCGGCATCCCAGACAAGGCCATCACC...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCAGACAGCTTCAGGGCTaGTGGTGCCGTGGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGRQLQG*WCRGVG
Trigger: ACCAACACCACGGCACCACCAGCCCTGAAGCTGTCT...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAAGACAGCTTCAGGGCTaGTGGTGCCGTGGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGRQLQG*WCRGVG
Trigger: ACCAACACCACGGCACCACCAGCCCTGAAGCTGTCT...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTTGCCCACATTGTTGGTaGCTGTGCAGTTGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFCPHCW*LCSCSS
Trigger: GCTACTACAACTGCACAGCCACCAACAATGTGGGCA...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGGGTTGCCCACATTGTTaGTGGCTGTGCAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEGCPHC*WLCSCS
Trigger: ACTACAACTGCACAGCCACCAACAATGTGGGCAACC...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCGGCACTGCATCCACGTaGCACGATAGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGGTAST*HDSFRS
Trigger: GGACCTGAAGCTATCGTGCCACGTGGATGCAGTGCC...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACAGGGCACGGGTGCCCCTaGGAAAGAAGCCATGCACAG +
Preference number: 4 (lower is better)
Translates to: NRSVCSSRGWGPGFSLFTGHGCP*ERSHAQ
Trigger: CTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCC...TGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACACCGAGCCCACATCGTTaGAGACGCTGCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: QVSMLITRVGARLLIVYTPSPHR*RRCTRS
Trigger: GCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGG...TGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACGCTTTGGCGGAGACCTaGAAGAGGCAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: QYAHHEGGGQASHCLHKYALAET*KRQAAE
Trigger: CTCGGCTGCCTGCCTCTTCCAGGTCTCCGCCAAAGC...GTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCGTAGGAGTAGTTCTTaGACAGCTTGTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLRRSSS*TACGCG
Trigger: CCCGCAGCCACAAGCTGTCCAAGAACTACTCCTACG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
CDS-3UTR CCA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAACCACCGCATTGTGCTaGTTCAACTGGCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPTTALC*FNWRML
Trigger: CAGCATCCGCCAGTTGAACCAGCACAATGCGGTGGT...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGACCACCGCATTGTGCTaGTTCAACTGGCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLTTALC*FNWRML
Trigger: CAGCATCCGCCAGTTGAACCAGCACAATGCGGTGGT...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTGTCAGGTCCTGGACCACCGCATTGTGCTaGTTCAACTGGCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: FWVRAFCRVQSKLSVRSWTTALC*FNWRML
Trigger: CAGCATCCGCCAGTTGAACCAGCACAATGCGGTGGT...CCAGGACCTGACAGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACACTGTGGTGGGAGGGTaGCCACCTCTGTGTGGCACC +
Preference number: 4 (lower is better)
Translates to: CGRRRRHSRTWRWHCRGDTVVGG*PPLCGT
Trigger: GGTGCCACACAGAGGTGGCCACCCTCCCACCACAGT...GTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAAGGGTCTCTTCTGTCTaGGGGCCTGGGAGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLRVSSV*GPGRRA
Trigger: TGCCCTTCTCCCAGGCCCCCAGACAGAAGAGACCCT...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTCGGCCTTTGGAAGCATaGAGGACTCCGCTGAACCCT +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKARPLEA*RTPLNP
Trigger: AGGGTTCAGCGGAGTCCTCCATGCTTCCAAAGGCCG...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGAGATGGTGATTATGTaGGTGGCTGGGAGGATGGCG +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEEMVIM*VAGRMA
Trigger: CGCCATCCTCCCAGCCACCCACATAATCACCATCTC...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGGAGGGCCACCAGAGTTaGGCTGAGATGGTGATTATG +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACREGHQS*AEMVIM
Trigger: CATAATCACCATCTCAGCCCAACTCTGGTGGCCCTC...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGTGCTTTGGTGGAGATaGCTGGAAGGCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLVLWWR*LEGWTQ
Trigger: CTGAGTCCAGCCTTCCAGCCATCTCCACCAAAGCAC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGTGCTTTGGTGGAGATaGCTGGAAGGCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAVLWWR*LEGWTQ
Trigger: CTGAGTCCAGCCTTCCAGCCATCTCCACCAAAGCAC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCCTTCTGGTGCTTTGGTaGAGATGGCTGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGLLVLW*RWLEGW
Trigger: CCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAG...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTTGCCGGGGACCATGCTaGATGCTGGATGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: QGGGVLVIHSHLPQKKLLCRGPC*MLDAMP
Trigger: TGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCA...AAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp GAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACTGCCCTTATTGCCACTaGGAGACCAGGCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: EQVSMLITRVGARLLIVYCPYCH*ETRRAC
Trigger: ACACGCACGCCTGGTCTCTCAGTGGCAATAAGGGCA...GTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCCCCCTTCTTCAGTGTaGCGTCATCTATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: PRWCQASGSCCQENPRSFPPSSV*RHLWQY
Trigger: ATATTGCCATAGATGACGTCACACTGAAGAAGGGGG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGTCAAGGAATCTGGGGTaGCCTATGGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWSRNLG*PMVSTI
Trigger: GATGGTGGAGACCATAGGTCACCCCAGATTCCTTGA...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAGATTGGAAGGTCCTCTaGGGGAAGCAGGCACAGGGT +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLDWKVL*GKQAQG
Trigger: ACCCTGTGCCTGCTTCCCTCAGAGGACCTTCCAATC...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGTCAGCCAACATGTACTaGGCACCTTTACTGTCCACT +
Preference number: 4 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRSANMY*APLLST
Trigger: AGTGGACAGTAAAGGTGCTCAGTACATGTTGGCTGA...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp ACTAACCTTGCACGGTCCCCCAGCTCCCGAGGCCTCGATGTCTCGATGAACATGCAGCATGAGCAACACTaGTACAGAGATGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TNLARSPSSRGLDVSMNMQHEQH*YRDAGS
Trigger: TGAGCCAGCATCTCTGTATCAGTGTTGCTCATGCTG...CATGTTCATCGAGACATCGAGGCCTCGGGAGCTGGGGGACCGTGCAAGGTTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCATGTCAGGCCCATCTCTaGGAGGTAGGGGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPCQAHL*EVGVEG
Trigger: TCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACA...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATGATCTGTGCGGACCGGGATGGCCTTaGCCACCGCATTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QKKLLMKSRPSHGQNDLCGPGWP*PPHCAG
Trigger: ACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCC...GCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR TCA 90 bp CAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTAGGTGGTATAGGGTGTaGGGCGGACCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: QGGGVLVIHSHLPQKKLLRWYRV*GGPHSC
Trigger: ACAGCTATGAGGTCCGCCTCACACCCTATACCACCT...AAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGCTCTGTGTAGTGGATaGTGCGGGAGGCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPALCSG*CGRPCH
Trigger: GTGACATGGCCTCCCGCATCATCCACTACACAGAGC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCGCTCTGTGTAGTGGATaGTGCGGGAGGCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: CSSRGWGPGFSLFTQVHSALCSG*CGRPCH
Trigger: GTGACATGGCCTCCCGCATCATCCACTACACAGAGC...GCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp AGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTAGCTCTGTGTAGTGGATaGTGCGGGAGGCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: RVVESWSSTLTYPRRSFLALCSG*CGRPCH
Trigger: GTGACATGGCCTCCCGCATCATCCACTACACAGAGC...TAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAGCTCTGTGTAGTGGATaGTGCGGGAGGCCATGTCAC +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLALCSG*CGRPCH
Trigger: GTGACATGGCCTCCCGCATCATCCACTACACAGAGC...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGAAGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCGCCTCGATGTCTCGATaGACATGTAGTAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GSQMEMRGLGRVVESWSSASMSR*TCSSPQ
Trigger: CTGAGGGCTACTACATGTTCATCGAGACATCGAGGC...GGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR TCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACCCTTTCCCTGAGAGGTaGGAGAGAGAGCGGCGACGA +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNPFPER*ERERRR
Trigger: TCGTCGCCGCTCTCTCTCTCACCTCTCAGGGAAAGG...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACTGCGCAGCGTCTCGTTaGACACCGATGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: EQVSMLITRVGARLLIVYCAASR*TPMSPG
Trigger: TCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCA...GTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp AGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAATACCCTTGGGCACACTaGTGGTGGGCGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: RSVCSSRGWGPGFSLFTQYPWAH*WWAALS
Trigger: AGACAGTGCCGCCCACCATCAGTGTGCCCAAGGGTA...TTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp ATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACACGGGGGCGCACGTTaGAGCCATTATAGCGGGCCG +
Preference number: 4 (lower is better)
Translates to: MICANGLGAPVDAESSIPHGGAR*SHYSGP
Trigger: CGGCCCGCTATAATGGCTTCAACGTGCGCCCCCGTG...TGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp TCTGCACGCCCCATCCGTGACCCTCCCGGTCTTTGGGGAAACCAAGAGGATGAGAAGAGGATGAGCACATaGGAACATGCTGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: SARPIRDPPGLWGNQEDEKRMST*EHADLH
Trigger: GTGAAGGTCAGCATGTTCTCATGTGCTCATCCTCTT...CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTCACGGATGGGGCGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAGGGAAACCAAGAGGATaGGCACATGAGAACATGCTG +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRGKPRG*AHENML
Trigger: CAGCATGTTCTCATGTGCTCATCCTCTTGGTTTCCC...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCTTTCTCCCAAGTCTTTaGGGTCTCAGGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSFLPSL*GLRAGA
Trigger: TGCACCAGCCCTGAGACCTCAAAGACTTGGGAGAAA...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTTCCTGTTTGGATTTCTaGGTGCCCATCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: ERLGFWVRAFCRVQSKLSSCLDF*VPIPLT
Trigger: AGTGAGGGGGATGGGCACTCAGAAATCCAAACAGGA...AGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAATCCTAGAGCTACCTTaGATCCAAAATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKILELP*IQNAHL
Trigger: CAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGAT...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTACGTTCCAAGAGGCCTaGGCTGAAGCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKATFQEA*AEAPRH
Trigger: ATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGT...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACCACAAGTACACAGCCTaGGTGAGTGTGGGGCACACC +
Preference number: 4 (lower is better)
Translates to: EQVSMLITRVGARLLIVYHKYTA*VSVGHT
Trigger: GGTGTGCCCCACACTCACTCAGGCTGTGTACTTGTG...GTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp GGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCCAGCCACGGGCAAAATaGTCTGTGCAAATGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GRVVESWSSTLTYPRRSFQPRAK*SVQMVW
Trigger: CCAAACCATTTGCACAGATCATTTTGCCCGTGGCTG...GAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR TCA 90 bp ACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGAGAAGAAGCTTCTTATaGAGTCCAGACCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: TRQGGGVLVIHSHLPQKKRRSFL*SPDPAT
Trigger: CGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCT...CTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGGCACATGGGCCTGCTaGCACACATTGCCCTTATTG +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDGTWAC*HTLPLL
Trigger: CAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCC...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGCACATGGGCCTGCTaGCACACATTGCCCTTATTG +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAGTWAC*HTLPLL
Trigger: CAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCC...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCACATGGGCCTGCTaGCACACATTGCCCTTATTG +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQGTWAC*HTLPLL
Trigger: CAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCC...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAATGGGCACATGGGCCTaGTGCCACACATTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGMGTWA*CHTLPL
Trigger: TAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCAT...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGAGTTATTGGGATCCGTCTaGTTCCGGGGACACTCCCCC +
Preference number: 4 (lower is better)
Translates to: ITRVGARLLIVYTSTQPELLGSV*FRGHSP
Trigger: GGGGGAGTGTCCCCGGAAGCAGACGGATCCCAATAA...CTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACTTATTGGGATCCGTCTaGTTCCGGGGACACTCCCCC +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENLLGSV*FRGHSP
Trigger: GGGGGAGTGTCCCCGGAAGCAGACGGATCCCAATAA...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTCCCTGGGTTGGCGGATaGCATTCAGGCAAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCPWVGG*HSGKSP
Trigger: AGGGGACTTGCCTGAATGGCATCCGCCAACCCAGGG...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGAAGCACACCACGAGTaGAGCAAGGACAAGGCCTAT +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLEAHHE*SKDKAY
Trigger: ATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAATCGTCCTCTGATCCCTaGCTCTCCCATCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQSSSDP*LSHLRS
Trigger: ACTCCTGAGATGGGAGAGGCAGGGATCAGAGGACGA...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGGCTCCTCACCAAAGGTaGTTGCATTCAATAGGGTCA +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRAPHQR*LHSIGS
Trigger: TGACCCTATTGAATGCAAGCACCTTTGGTGAGGAGC...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTACTCCTGGCACTGCAGTaGTGCCCGAGTTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: RRRRHSRTWRWHCRGDSLLLALQ*CPSSRP
Trigger: AGGCCTGGAACTCGGGCAGCACTGCAGTGCCAGGAG...TAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTGGGGGCCACATGTATaGAGTTCAGCTCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGWGPHV*SSAQPT
Trigger: TGTTGGCTGAGCTGAACTGCATACATGTGGCCCCCA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGCATCCCCCACCCACCTaGTGGCACACACAGACATCC +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLHPPPT*WHTQTS
Trigger: GGATGTCTGTGTGTGCCAGCAGGTGGGTGGGGGATG...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGACAGAGACCAGCACATaGCTAGACATTTACAGTGCC +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQTETST*LDIYSA
Trigger: GGCACTGTAAATGTCTAGGCATGTGCTGGTCTCTGT...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CACAGCTCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACACACTGATACAGAGATaGTGGCTCACAGGCACACAC +
Preference number: 4 (lower is better)
Translates to: HSSHHLCNAKRKMAMGPHTLIQR*WLTGTH
Trigger: GTGTGTGCCTGTGAGCCAGCATCTCTGTATCAGTGT...GTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGGAGACTTCCATAAGCTaGTATACAGCACCTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWETSIS*YTAPGP
Trigger: GGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTC...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTCTTTCACCACACATaGCTGGCCCGCATGCACGAT +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGLFHHT*LARMHD
Trigger: ATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAG...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAACTCTTTCACCACACATaGCTGGCCCGCATGCACGAT +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQLFHHT*LARMHD
Trigger: ATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAG...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp TATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGTCCGAGGCGCTACCTaGCGTCTTGGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: YAHHEGGGQASHCLHKYTVRGAT*RLGPPY
Trigger: GTACGGTGGACCAAGACGGCAGGTAGCGCCTCGGAC...TGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATGATCTGTGCGTCCGAGGCGCTACCTaGCGTCTTGGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: QKKLLMKSRPSHGQNDLCVRGAT*RLGPPY
Trigger: GTACGGTGGACCAAGACGGCAGGTAGCGCCTCGGAC...GCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp CTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATGATCGCCGTTCTCAGCCTTaGAGTAGTAGCGGCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LPQKKLLMKSRPSHGQNDRRSQP*SSSGRP
Trigger: AGGGCGGCCGCTACTACTGCAAGGCTGAGAACGGCG...ATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp ACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACTCGCTCACCGTCTGGTaGACCGTCAGCATTGGCTCA +
Preference number: 4 (lower is better)
Translates to: TGQYAHHEGGGQASHCLHSLTVW*TVSIGS
Trigger: TGAGCCAATGCTGACGGTGCACCAGACGGTGAGCGA...GTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTATCGCTCACCGTCTGGTaGACCGTCAGCATTGGCTCA +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLSLTVW*TVSIGS
Trigger: TGAGCCAATGCTGACGGTGCACCAGACGGTGAGCGA...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTCTCCTGGTAGAAGTTaGCTCGCACATCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: REQVSMLITRVGARLLIVSPGRS*LAHRSP
Trigger: CGGTGAGCGATGTGCGAGGCAACTTCTACCAGGAGA...AACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACTGGCCTTGTCTGGGATaGCGCACACGTTACGCACAG +
Preference number: 4 (lower is better)
Translates to: EQVSMLITRVGARLLIVYWPCLG*RTRYAQ
Trigger: CTGTGCGTAACGTGTGCGGCATCCCAGACAAGGCCA...GTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATCCAGAGTCCCGGGCCTaGACTGAAGGGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDPESRA*TEGMLR
Trigger: CCTCAGCATCCCTTCAGTGCAGGCCCGGGACTCTGG...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTCTTCTTGGCAGGGTTaGCCACATTGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGISSWQG*PHCWWL
Trigger: CAGCCACCAACAATGTGGGCAACCCTGCCAAGAAGA...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGTCTTCTTGGCAGGGTTaGCCACATTGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLSSWQG*PHCWWL
Trigger: CAGCCACCAACAATGTGGGCAACCCTGCCAAGAAGA...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGCTGGGAAAGAAGCCATaGACAGGTAGGTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGLGKKP*TGRCHS
Trigger: ACTATGGCACCTACCTGTGCATGGCTTCTTTCCCAG...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACAGAGGTCGGGCACGGGTaGCCCTGGGAAAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTEVGHG*PWERSH
Trigger: ATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTC...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp TCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTAAACTGCACGTTCAGCTaGACCTGGGCCTCACGGGGG +
Preference number: 4 (lower is better)
Translates to: SVCSSRGWGPGFSLFTQVNCTFS*TWASRG
Trigger: CCCCCGTGAGGCCCAGGTGCAGCTGAACGTGCAGTT...TACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTTCTCCACGATGAGCCTTCGCTGCACTCGTAGCTaGCGCTGCTGTCGCGAGTTA +
Preference number: 4 (lower is better)
Translates to: QFSLTHHPSCGNFSTMSLRCTRS*RCCREL
Trigger: TAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCG...AAGGCTCATCGTGGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTTGACCACCGCATTGTaGTGGTTCAACTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: AGWWSPGHPLSPTPEEASLTTAL*WFNWRM
Trigger: CATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAA...AGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAAAGAGAAGAAAGGCTaGCCCCAGGGAGCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREKEKKG*PQGAER
Trigger: CCTCTCAGCTCCCTGGGGGCAGCCTTTCTTCTCTTT...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGGATTTCTCTTCCTGTaGTCAGGGAGCCAACCTACA +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTGFLFL*SGSQPT
Trigger: TGTAGGTTGGCTCCCTGAGCACAGGAAGAGAAATCC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACATCCCATATCTTCTGGTaGTTTGGTGGAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTSHIFW*FGGDGW
Trigger: CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGA...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTTCCCTGGTCCCTATGTaGCGCCTTCACTCTCATGCT +
Preference number: 4 (lower is better)
Translates to: QGGGVLVIHSHLPQKKLLSLVPM*RLHSHA
Trigger: AGCATGAGAGTGAAGGCGGCACATAGGGACCAGGGA...AAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGCCCTCAAAAATAATCTaGAAGGGCCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWPSKII*KGPLGL
Trigger: CAGCCCCAGTGGGCCCTTCCAGATTATTTTTGAGGG...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCAGGGCCTCAGTGCCTaGCCTCTGTCCTTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENQGLSA*PLSLFS
Trigger: AGAGAACAAGGACAGAGGCCAGGCACTGAGGCCCTG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGGTGCGTGTGTGCAAGTaGAACAGCTGTCTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQVRVCK*NSCLQG
Trigger: GCCCTGGAGACAGCTGTTCCACTTGCACACACGCAC...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCACTTGTCTCCTGGACGTaGGACAGTCACAGAGCTCGC +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPLVSWT*DSHRAR
Trigger: GCGAGCTCTGTGACTGTCCCACGTCCAGGAGACAAG...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGATCCAGTGCTCACTCTaGACAGAATCGTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGIQCSL*TESCAA
Trigger: TGCTGCACACGATTCTGTCCAGAGTGAGCACTGGAT...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGGTAAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGCCCAAGACCCTGTGCTaGGTCCCTTCAAAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RVKSEAHHECSKDKAYVAPKTLC*VPSKGA
Trigger: TGCACCCTTTGAAGGGACCCAGCACAGGGTCTTGGG...CGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGACCACTGCTTGTAGGGTaGAGTGGGGAAGTTATCAGT +
Preference number: 4 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRPLLVG*SGEVIS
Trigger: ACTGATAACTTCCCCACTCCACCCTACAAGCAGTGG...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAACATTCTAGAAGGGGCTaGGCCTTCTCTCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQHSRRG*AFSLPW
Trigger: CCATGGGAGAGAGAAGGCCCAGCCCCTTCTAGAATG...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTATGATCACACAGGCCTaGCAGGGGGAGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCMITQA*QGEMGS
Trigger: GCTGCCCATCTCCCCCTGCCAGGCCTGTGTGATCAT...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGAGCTCACAGTCTAGTTaGGGCAATGGACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGSSQSS*GNGLCT
Trigger: TGTGCAGAGTCCATTGCCCCAACTAGACTGTGAGCT...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CCGAGGCCTCGATGTCTCGATGAACATGTAGTAGCCCTCAGGGGTGCCACTTATGGGTTGCGGGGCAAATaGATTGGAAGGTCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: PRPRCLDEHVVALRGATYGLRGK*IGRSSE
Trigger: CTCAGAGGACCTTCCAATCCATTTGCCCCGCAACCC...ATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGTCACCCATTCACACGTaGGGACCTCAGCATTTCAGC +
Preference number: 4 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVSPIHT*GPQHFS
Trigger: GCTGAAATGCTGAGGTCCCCACGTGTGAATGGGTGA...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGGACACTGACACACCATaGCGCACAAAGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGDTDTP*RTKTQH
Trigger: ATGCTGTGTCTTTGTGCGCCATGGTGTGTCAGTGTC...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGACAGGGCTGTAGTACTTaGCTCTCCCAAGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGQGCST*LSQDWL
Trigger: GAGCCAGTCTTGGGAGAGCCAAGTACTACAGCCCTG...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTGAGCGTTTGGGGTTCTaGGTGAGGGCATTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: VVEEGDTVELGAGIVEGTERLGF*VRAFCR
Trigger: GCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC...AGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCGAGCGTTTGGGGTTCTaGGTGAGGGCATTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PGHPLSPTPEEASYEVQTERLGF*VRAFCR
Trigger: GCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC...GGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTTGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCCHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACTGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VCSSRGWGPGFSLFTQVHCHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...GTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACTTCACCACACATGCCTaGCCCGCATGCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENFTTHA*PACTIC
Trigger: GCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAA...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGCCATTGTCCTGGCTGTaGGATAGGGTATCGGAACCC +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTPLSWL*DRVSEP
Trigger: GGGTTCCGATACCCTATCCCACAGCCAGGACAATGG...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTCAACCCCATTGTCCTaGCTGTGGGATAGGGTATCG +
Preference number: 4 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLSTPLS*LWDRVS
Trigger: CGATACCCTATCCCACAGCCAGGACAATGGGGTTGA...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTCAACCCCATTGTCCTaGCTGTGGGATAGGGTATCG +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGISTPLS*LWDRVS
Trigger: CGATACCCTATCCCACAGCCAGGACAATGGGGTTGA...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTCAGCTTCAGGACCTTaGTCTCCCCCTGAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGISASGP*SPPECR
Trigger: TCTACACTCAGGGGGAGACCAAGGTCCTGAAGCTGA...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGTCAGCTTCAGGACCTTaGTCTCCCCCTGAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPESASGP*SPPECR
Trigger: TCTACACTCAGGGGGAGACCAAGGTCCTGAAGCTGA...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACCTGGCAGGTGTAGCTaGCATAGTCCTGGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTPGRCS*HSPGAA
Trigger: TGCGGCCCCAGGACTATGCCAGCTACACCTGCCAGG...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGGTGATGGCCTTGTCTaGGATGCCGCACACGTTACG +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPGDGLV*DAAHVT
Trigger: CGTAACGTGTGCGGCATCCCAGACAAGGCCATCACC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACGGTGATGGCCTTGTCTaGGATGCCGCACACGTTACG +
Preference number: 4 (lower is better)
Translates to: EQVSMLITRVGARLLIVYGDGLV*DAAHVT
Trigger: CGTAACGTGTGCGGCATCCCAGACAAGGCCATCACC...GTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACGGTGATGGCCTTGTCTaGGATGCCGCACACGTTACG +
Preference number: 4 (lower is better)
Translates to: RSKRPELKLQGIFNSACHGDGLV*DAAHVT
Trigger: CGTAACGTGTGCGGCATCCCAGACAAGGCCATCACC...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACAGACAGCTTCAGGGCTaGTGGTGCCGTGGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: EQVSMLITRVGARLLIVYRQLQG*WCRGVG
Trigger: ACCAACACCACGGCACCACCAGCCCTGAAGCTGTCT...GTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATACGTCAGGAGTGATCTaGAATGTAGCGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHTSGVI*NVAFFM
Trigger: CATGAAGAACGCTACATTCCAGATCACTCCTGACGT...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGAGGTCCTGGCCCAGCTaGATGTTCTCACTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLRSWPS*MFSLSL
Trigger: CAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCT...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp ACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTGGGCACGGGTGCCCCTaGGAAAGAAGCCATGCACAG +
Preference number: 4 (lower is better)
Translates to: TGKMICANGLGAPVDAESGHGCP*ERSHAQ
Trigger: CTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCC...AGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTACCGGCCGGCCCAGCGCCTaGCGCACGTCCTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: LLHDEPLYLHLLKVTPSTGRPSA*RTSWEL
Trigger: CAGTTCCCAGGACGTGCGCCAGGCGCTGGGCCGGCC...GGTAGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTGCTTTGGCGGAGACCTaGAAGAGGCAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCALAET*KRQAAE
Trigger: CTCGGCTGCCTGCCTCTTCCAGGTCTCCGCCAAAGC...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434837.8
CDS-3UTR CCA 90 bp GGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCGCTTTGGCGGAGACCTaGAAGAGGCAGGCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GQNDLCKWFGSPSGCRIFALAET*KRQAAE
Trigger: CTCGGCTGCCTGCCTCTTCCAGGTCTCCGCCAAAGC...GAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACTTCTTGGACAGCTTGTaGCTGCGGGTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: QYAHHEGGGQASHCLHKYFLDSL*LRVGLG
Trigger: CCCCAACCCCACCCGCAGCCACAAGCTGTCCAAGAA...GTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp ATGAAGTCCAGACCCAGCCACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCTTCTTGGACAGCTTGTaGCTGCGGGTGGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: MKSRPSHGQNDLCKWFGSFLDSL*LRVGLG
Trigger: CCCCAACCCCACCCGCAGCCACAAGCTGTCCAAGAA...GCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp CAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTACCACCGCATTGTGCTaGTTCAACTGGCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: QGGGVLVIHSHLPQKKLLTTALC*FNWRML
Trigger: CAGCATCCGCCAGTTGAACCAGCACAATGCGGTGGT...AAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp CCGAGGCCTCGATGTCTCGATGAACATGTAGTAGCCCTCAGGGGTGCCACTTATGACCCTCCCGGTCTTTaGGGAAACCAAGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: PRPRCLDEHVVALRGATYDPPGL*GNQEDE
Trigger: CTCATCCTCTTGGTTTCCCCAAAGACCGGGAGGGTC...ATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAACCTCGCCTGTACAATaGGGGCACCAGCTTAGATGC +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQTSPVQ*GHQLRC
Trigger: GCATCTAAGCTGGTGCCCCCATTGTACAGGCGAGGT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTCAAGAGGGCAAGGGGTaGGGTGGGCAGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCQEGKG*GGQMPS
Trigger: GGATGGCATCTGCCCACCCCACCCCTTGCCCTCTTG...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGGCAGGAAGAATGCATaGAGACCTAGAGGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTGRKNA*RPRGPP
Trigger: TGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTGCACACAAGTTCACTaGGAGCAGACCAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGICTQVH*EQTRMQ
Trigger: CTGCATCCTGGTCTGCTCCCAGTGAACTTGTGTGCA...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTGGGAGAGGGAGCCCTTaGTCTTGTAATCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCGRGSP*SCNLSF
Trigger: GAAGCTCAGATTACAAGACCAAGGGCTCCCTCTCCC...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATTCCAAAATGCCCATCTaGTTCAGGAAAACCATCCCT +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHSKMPI*FRKTIP
Trigger: AGGGATGGTTTTCCTGAACCAGATGGGCATTTTGGA...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTTGGTGGAGATGGCTaGAAGGCTGGACTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTFGGDG*KAGLSW
Trigger: CCAGCTGAGTCCAGCCTTCCAGCCATCTCCACCAAA...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAGTGCTTTGGTGGAGATaGCTGGAAGGCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGVLWWR*LEGWTQ
Trigger: CTGAGTCCAGCCTTCCAGCCATCTCCACCAAAGCAC...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACCTTCTGGTGCTTTGGTaGAGATGGCTGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHLLVLW*RWLEGW
Trigger: CCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAG...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACTTCTGGTGCTTTGGTaGAGATGGCTGGAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGLLVLW*RWLEGW
Trigger: CCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAG...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTAGGTGGCAGTTAGGCTaGTCTGGAAGGTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKARWQLG*SGRSEA
Trigger: TGCCTCAGACCTTCCAGACCAGCCTAACTGCCACCT...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGAGTGCTCATCACGAGGGTaGGGGCCAGGCTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: ITRVGARLLIVYTSTQPECSSRG*GPGFSL
Trigger: CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCA...CTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp GGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATGCACGATCTGCGCCTaGGCTGGAGCTAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GLGAPVDAESSIPLHSCSCTICA*AGASSC
Trigger: GCAGGAGCTAGCTCCAGCCCAGGCGCAGATCGTGCA...TGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp AGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTACAGCATGTCACATTCTaGAAGGGCCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RVVESWSSTLTYPRRSFLQHVTF*KGPLGL
Trigger: CAGCCCCAGTGGGCCCTTCCAGAATGTGACATGCTG...TAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR TCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGCCACTCTATGGATCCTaGGGGGAACAAGGGAGACAA +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASREPLYGS*GEQGRQ
Trigger: TTGTCTCCCTTGTTCCCCTCAGGATCCATAGAGTGG...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACCCACTCTATGGATCCTaGGGGGAACAAGGGAGACAA +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDPLYGS*GEQGRQ
Trigger: TTGTCTCCCTTGTTCCCCTCAGGATCCATAGAGTGG...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACTCAGCCAACATGTACTaGGCACCTTTACTGTCCACT +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHSANMY*APLLST
Trigger: AGTGGACAGTAAAGGTGCTCAGTACATGTTGGCTGA...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGCTCAAACTAGCTGTGTaGCCTTGGGCCACTCCCCTT +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQLKLAV*PWATPL
Trigger: AAGGGGAGTGGCCCAAGGTCACACAGCTAGTTTGAG...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGTGTAGACACGCTCGCTaGTATTGTCCTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRCRHAR*YCPLSP
Trigger: TGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACA...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTTGCGCAGCGTCTCGTTaGACACCGATGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCCAASR*TPMSPG
Trigger: TCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCA...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCCACATGAGAACATGCTaGCCTTCACTCCTAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSHMRTC*PSLLAQ
Trigger: TTGGGCTAGGAGTGAAGGTCAGCATGTTCTCATGTG...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCTTTCTCCCAAGTCTTTaGGGTCTCAGGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGFLPSL*GLRAGA
Trigger: TGCACCAGCCCTGAGACCTCAAAGACTTGGGAGAAA...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCGAGGCCTCGATGTCTCGATGAACATGTAGTAGCCCTCAGGGGTGCCACTTATATGTGGGCCTGGGCATaGGGAGTTTTGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PRPRCLDEHVVALRGATYMWAWA*GVLAFL
Trigger: GAGAAAAGCCAAAACTCCTCATGCCCAGGCCCACAT...ATAAGTGGCACCCCTGAGGGCTACTACATGTTCATCGAGACATCGAGGCCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAACGTTCCAAGAGGCCTaGGCTGAAGCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLTFQEA*AEAPRH
Trigger: ATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGT...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGCCAAATGGAAATaGGAGGACTCGGCAGGGTGG +
Preference number: 4 (lower is better)
Translates to: GWWSPGHPLSPTPEEASYEAKWK*EDSAGW
Trigger: CCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTC...ATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACATGGGCACATGGGCCTaGTGCCACACATTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENMGTWA*CHTLPL
Trigger: TAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCAT...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACAGCTCTCATCATCTCTaGAACGCCAAGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHSSHHL*NAKRKM
Trigger: CATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCT...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCAAGTCCCCTGTCTTTaGAGTAAAGAAGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLQVPCL*SKEGAG
Trigger: GCCAGCACCTTCTTTACTGCAAAGACAGGGGACTTG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCGGTCCCTTCAAAGGGTaGACACTGAGGAGGGAAATA +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSGPFKG*TLRREI
Trigger: TATTTCCCTCCTCAGTGTGCACCCTTTGAAGGGACC...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGATATCAGTCTTCAGACTaGCCAGGCCCAAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGYQSSD*PGPRPC
Trigger: ACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATA...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAACATGTCAATCTCAGGTaGCTAACCCAGGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQHVNLR*LTQDPR
Trigger: CCTTGGGTCCTGGGTTAGGCACCTGAGATTGACATG...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTCATCCCCCACCCACCTaGTGGCACACACAGACATCC +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCHPPPT*WHTQTS
Trigger: GGATGTCTGTGTGTGCCAGCAGGTGGGTGGGGGATG...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCATGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATTGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GWWSPGHPLSPTPEEASYWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...ATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACAACCTGGGGTCGAGGGTaGCCTGTTACAAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTTWGRG*PVTRHC
Trigger: GCAGTGCCTTGTAACAGGGCACCCTCGACCCCAGGT...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCAACCTGGGGTCGAGGGTaGCCTGTTACAAGGCACTGC +
Preference number: 4 (lower is better)
Translates to: GLGAPVDAESSIPLHSCSTWGRG*PVTRHC
Trigger: GCAGTGCCTTGTAACAGGGCACCCTCGACCCCAGGT...TGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp ATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTTCTCCGCCGCCCTGCGTGCGTaGAATACGCTCGATGCGCAG +
Preference number: 4 (lower is better)
Translates to: ILVHQFSLTHHPSCGNFSAALRA*NTLDAQ
Trigger: CTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGC...GGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTCCTGTCAGCAGACACTaGACCGTCACATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFPVSRH*TVTFSP
Trigger: TGGGGAGAATGTGACGGTGCAGTGTCTGCTGACAGG...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCCTGTCAGCAGACACTaGACCGTCACATTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENPVSRH*TVTFSP
Trigger: TGGGGAGAATGTGACGGTGCAGTGTCTGCTGACAGG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTTCTTCTTGGCAGGGTTaGCCACATTGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKASSWQG*PHCWWL
Trigger: CAGCCACCAACAATGTGGGCAACCCTGCCAAGAAGA...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCCTGGGAAAGAAGCCATaGACAGGTAGGTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEALGKKP*TGRCHS
Trigger: ACTATGGCACCTACCTGTGCATGGCTTCTTTCCCAG...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR GCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACTTGACCACCGCATTGTaGTGGTTCAACTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDLTTAL*WFNWRM
Trigger: CATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAA...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGATTGACCACCGCATTGTaGTGGTTCAACTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRLTTAL*WFNWRM
Trigger: CATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAA...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATGGGAGCAGACCAGGATaGAGGTCCTCACTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VSRTCGRRRRHSRTWRWHGSRPG*RSSLSR
Trigger: CCTGGACAGTGAGGACCTGCATCCTGGTCTGCTCCC...ATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACGGCCCTGTTGGCCTTTaGATATTCTGTTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHGPVGL*IFCSLC
Trigger: GCAGAGGGAACAGAATATGCAAAGGCCAACAGGGCC...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTTAGTCCTCCTCCTTTaGCCTTACTCCCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGLVLLL*PYSPSL
Trigger: CAAGGAAGGGGAGTAAGGGCAAAGGAGGAGGACTAA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGGGTCACTTTGCAAATaGTCATCACTGCCTATCCCC +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAGSLCK*SSLPIP
Trigger: GGGGATAGGCAGTGATGAGCATTTGCAAAGTGACCC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTGTTTGGATTTCTGAGTaGCCATCCCCCTCACTGTGT +
Preference number: 4 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCVWISE*PSPSLC
Trigger: ACACAGTGAGGGGGATGGGCACTCAGAAATCCAAAC...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTCCCATATCTTCTGGTaGTTTGGTGGAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGSHIFW*FGGDGW
Trigger: CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR GCA 90 bp CCAGCCACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGGGAGCCCCAGTGGATaGAGAATCTTCTATCCCACT +
Preference number: 4 (lower is better)
Translates to: PATGKMICANGLGAPVDAGSPSG*RIFYPT
Trigger: AGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCC...TGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTCCCTCAAAAATAATCTaGAAGGGCCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAPSKII*KGPLGL
Trigger: CAGCCCCAGTGGGCCCTTCCAGATTATTTTTGAGGG...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCACAATGTGGACACTTTaGTGTGCCGGGGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGTMWTL*CAGGKV
Trigger: AACCTTGCCCCCGGCACACCAAAGTGTCCACATTGT...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATTTGCGCCGAGGTCCCTaGGTTGGCGGATGCCATTCA +
Preference number: 4 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYLRRGP*VGGCHS
Trigger: TGAATGGCATCCGCCAACCCAGGGACCTCGGCGCAA...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAATCTGGGGTGACCTATaGTCTCCACCATCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRIWGDL*SPPSSA
Trigger: AGCACTGGATGGTGGAGACCATAGGTCACCCCAGAT...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCACTAGACAGTGCTTTTTaGCATTTTGCCCTGTACACA +
Preference number: 4 (lower is better)
Translates to: TSVGGAFGVLGEGILPRPLDSAF*HFALYT
Trigger: TGTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAG...TGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTACTCCTTCACTGCCCCTaGGTGGAGAAGGGAACTTTC +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLLLHCP*VEKGTF
Trigger: GAAAGTTCCCTTCTCCACCCAGGGGCAGTGAAGGAG...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTACAATGTACCCACGGTaGTACCTAGACACAGACGGG +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKATMYPR*YLDTDG
Trigger: CCCGTCTGTGTCTAGGTACCACCGTGGGTACATTGT...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGACAATGTACCCACGGTaGTACCTAGACACAGACGGG +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTTMYPR*YLDTDG
Trigger: CCCGTCTGTGTCTAGGTACCACCGTGGGTACATTGT...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACTCAGAACCTCTGAGGTaGGAACCAAGCAGCAATACT +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHSEPLR*EPSSNT
Trigger: AGTATTGCTGCTTGGTTCCCACCTCAGAGGTTCTGA...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCCAAAGAGGGAGCACTTaGGGCTATTCATCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGIQRGST*GYSSLV
Trigger: CACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTG...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAATCACCCATTCACACGTaGGGACCTCAGCATTTCAGC +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQSPIHT*GPQHFS
Trigger: GCTGAAATGCTGAGGTCCCCACGTGTGAATGGGTGA...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCGACACTGACACACCATaGCGCACAAAGACACAGCAT +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGDTDTP*RTKTQH
Trigger: ATGCTGTGTCTTTGTGCGCCATGGTGTGTCAGTGTC...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATGGCGGGGGTCACTCATaGGCCACCCATCAACACACA +
Preference number: 4 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYGGGHS*ATHQHT
Trigger: TGTGTGTTGATGGGTGGCCCATGAGTGACCCCCGCC...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATGAGCGTTTGGGGTTCTaGGTGAGGGCATTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYERLGF*VRAFCR
Trigger: GCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ATCTCAGCTCACTGCAACCTTCACCACCGATGTGTTTCCCGTACATGTGGTAGATGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ISAHCNLHHRCVSRTCGRCHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...TCTACCACATGTACGGGAAACACATCGGTGGTGAAGGTTGCAGTGAGCTGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502298.1
CDS-3UTR CCA 90 bp ACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGKMICANGLGAPVDAESCHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...AGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVSRTWR*HCRGDS
Trigger: TGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACT...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPSRTWR*HCRGDS
Trigger: TGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACT...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLSRTWR*HCRGDS
Trigger: TGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACT...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWSRTWR*HCRGDS
Trigger: TGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACT...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEARHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGRHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTAACACCGATGTCTCCTaGAACTTGTCCGAGGCGCTA +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKANTDVS*NLSEAL
Trigger: TAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTT...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACACCGATGTCTCCTaGAACTTGTCCGAGGCGCTA +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASRENTDVS*NLSEAL
Trigger: TAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTT...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCGTGCACCGTCAGCATTaGCTCATCCAGGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: CSSRGWGPGFSLFTQVHSVHRQH*LIQVLH
Trigger: GTGCAGTACCTGGATGAGCCAATGCTGACGGTGCAC...GCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTCAGCTTCAGGACCTTaGTCTCCCCCTGAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: REQVSMLITRVGARLLIVSASGP*SPPECR
Trigger: TCTACACTCAGGGGGAGACCAAGGTCCTGAAGCTGA...AACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGATCAGCTTCAGGACCTTaGTCTCCCCCTGAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGSASGP*SPPECR
Trigger: TCTACACTCAGGGGGAGACCAAGGTCCTGAAGCTGA...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCTGGGACCACTGCAGCTaGGGGAGGGGATCACCGCCT +
Preference number: 4 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICWDHCS*GRGSPP
Trigger: AGGCGGTGATCCCCTCCCCCAGCTGCAGTGGTCCCA...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCTGCCCACATTGTTGGTaGCTGTGCAGTTGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSCPHCW*LCSCSS
Trigger: GCTACTACAACTGCACAGCCACCAACAATGTGGGCA...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCCCACATTGTTGGTaGCTGTGCAGTTGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEACPHCW*LCSCSS
Trigger: GCTACTACAACTGCACAGCCACCAACAATGTGGGCA...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAACGTCAGGAGTGATCTaGAATGTAGCGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: VGGAFGVLGEGILPRPVKTSGVI*NVAFFM
Trigger: CATGAAGAACGCTACATTCCAGATCACTCCTGACGT...TTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCAGGTCCTGGCCCAGCTaGATGTTCTCACTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGRSWPS*MFSLSL
Trigger: CAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCT...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGATAGCTTCAGGTCCTaGCCCAGCTGGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQDSFRS*PSWMFS
Trigger: TGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATC...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTGATAGCTTCAGGTCCTaGCCCAGCTGGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: SQMEMRGLGRVVESWSSTDSFRS*PSWMFS
Trigger: TGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATC...AGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp ATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCATCACCAGCAGCCGCTTaGACATGCGTGCCGGCTTGC +
Preference number: 4 (lower is better)
Translates to: MICANGLGAPVDAESSIPSPAAA*TCVPAC
Trigger: GCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGA...TGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATCCGAGCCCACATCGTTaGAGACGCTGCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: CANGLGAPVDAESSIPLHPSPHR*RRCTRS
Trigger: GCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGG...ATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp GGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATCGTAGGAGTAGTTCTTaGACAGCTTGTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GWWSPGHPLSPTPEEASYRRSSS*TACGCG
Trigger: CCCGCAGCCACAAGCTGTCCAAGAACTACTCCTACG...ATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACACCACCGCATTGTGCTaGTTCAACTGGCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: RSKRPELKLQGIFNSACHTTALC*FNWRML
Trigger: CAGCATCCGCCAGTTGAACCAGCACAATGCGGTGGT...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACGAAGGGTCTGCAGCCTaGGATGAGAGGCCAGAATTT +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHEGSAA*DERPEF
Trigger: AAATTCTGGCCTCTCATCCCAGGCTGCAGACCCTTC...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATCTGCAGACACTGTGGTaGGAGGGTGGCCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: VSRTCGRRRRHSRTWRWHLQTLW*EGGHLC
Trigger: ACAGAGGTGGCCACCCTCCCACCACAGTGTCTGCAG...ATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGATGCACACAAGTTCACTaGGAGCAGACCAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRCTQVH*EQTRMQ
Trigger: CTGCATCCTGGTCTGCTCCCAGTGAACTTGTGTGCA...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCGTTTTTGGGCCCTGTTaGCCTTTGCATATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASVFGPC*PLHILF
Trigger: GAACAGAATATGCAAAGGCCAACAGGGCCCAAAAAC...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGTCCAAAATGCCCATCTaGTTCAGGAAAACCATCCCT +
Preference number: 4 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQSKMPI*FRKTIP
Trigger: AGGGATGGTTTTCCTGAACCAGATGGGCATTTTGGA...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGATGGCTGGAAGGCTaGACTCAGCTGGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPRWLEG*TQLGWS
Trigger: TGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATCT...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACTTTGGTGGAGATGGCTaGAAGGCTGGACTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENFGGDG*KAGLSW
Trigger: CCAGCTGAGTCCAGCCTTCCAGCCATCTCCACCAAA...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTATCTTCTGGTGCTTTaGTGGAGATGGCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEAYLLVL*WRWLEG
Trigger: GCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATA...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAGACTCGGCAGGGTGGTaGAGTCCTGGTCATCCACTC +
Preference number: 4 (lower is better)
Translates to: RRRRHSRTWRWHCRGDSLDSAGW*SPGHPL
Trigger: GAGTGGATGACCAGGACTCCACCACCCTGCCGAGTC...TAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp GGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCAGAGGACTCGGCAGGGTaGTGGAGTCCTGGTCATCCA +
Preference number: 4 (lower is better)
Translates to: GLGAPVDAESSIPLHSCSEDSAG*WSPGHP
Trigger: TGGATGACCAGGACTCCACCACCCTGCCGAGTCCTC...TGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR CAA 72 bp GTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATaGTTTACACAAGTACACAGCCTGAGTGAGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VCSSRGWGPGFS*FTQVHSLSECG
Trigger: CCCACACTCACTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGCCCCCTTCTTCAGTGTaGCGTCATCTATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEPPSSV*RHLWQY
Trigger: ATATTGCCATAGATGACGTCACACTGAAGAAGGGGG...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCCAAGTAGATAAGAAATaGAGGCCCCTCTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGQVDKK*RPLSTS
Trigger: GGAAGTGGAGAGGGGCCTTCATTTCTTATCTACTTG...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGAGGTGGTATAGGGTGTaGGGCGGACCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLRWYRV*GGPHSC
Trigger: ACAGCTATGAGGTCCGCCTCACACCCTATACCACCT...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TTCACCACCGATGTGTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAAGTTTGGGGTTCTGGGTaGGGGCATTCTGCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: FTTDVFPVHVVEEGDTVEVWGSG*GHSAAS
Trigger: GGACGCGGCAGAATGCCCTCACCCAGAACCCCAAAC...TTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAACACATCGGTGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502298.1
CDS-3UTR TCA 90 bp TGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCGCCTCGATGTCTCGATaGACATGTAGTAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSSRGWGPGFSLFTQVHSASMSR*TCSSPQ
Trigger: CTGAGGGCTACTACATGTTCATCGAGACATCGAGGC...GCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACGAAGACCAGGAGACTaGAGAGGCGGAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPRRPGD*RGGGGG
Trigger: GCCGCCACCTCCGCCTCTTCAGTCTCCTGGTCTTCG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTGTAGACACGCTCGCTaGTATTGTCCTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGCRHAR*YCPLSP
Trigger: TGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACATCGCACCAGCAGGTTaGCAGTCTTCTTGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VCSSRGWGPGFSLFTQVHIAPAG*QSSWQG
Trigger: ACCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGAT...GTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp AACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACCGGCTTGCCATTCTTaGACCACTGGTAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: NRSVCSSRGWGPGFSLFTPACHS*TTGRSP
Trigger: AGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCGG...TGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATCATGGAGGACTCCGCTaGACCCTGAACCCAACCTCA +
Preference number: 4 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDHGGLR*TLNPTS
Trigger: TGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCATG...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGGGTAAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGATGTGGGCCTGGGCATaGGGAGTTTTGGCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RVKSEAHHECSKDKAYVAMWAWA*GVLAFL
Trigger: GAGAAAAGCCAAAACTCCTCATGCCCAGGCCCACAT...CGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACTTCCTGTCATTTGCCTaGTATGATGTAGTCCATATC +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDFLSFA*YDVVHI
Trigger: GATATGGACTACATCATATCAGGCAAATGACAGGAA...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCATCCTGTTTGGATTTCTaGGTGCCCATCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPSCLDF*VPIPLT
Trigger: AGTGAGGGGGATGGGCACTCAGAAATCCAAACAGGA...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTAGTACACAGCCTGAGTaGGTGTGGGGCACACCTTCA +
Preference number: 4 (lower is better)
Translates to: VSMLITRVGARLLIVYTSSTQPE*VWGTPS
Trigger: TGAAGGTGTGCCCCACACTCACTCAGGCTGTGTACT...ACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp AACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACAGGCACATGGGCCTGCTaGCACACATTGCCCTTATTG +
Preference number: 4 (lower is better)
Translates to: NRSVCSSRGWGPGFSLFTGTWAC*HTLPLL
Trigger: CAATAAGGGCAATGTGTGGCAGCAGGCCCATGTGCC...TGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp AGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAATGGGCACATGGGCCTaGTGCCACACATTGCCCTTA +
Preference number: 4 (lower is better)
Translates to: RSVCSSRGWGPGFSLFTQMGTWA*CHTLPL
Trigger: TAAGGGCAATGTGTGGCAGCAGGCCCATGTGCCCAT...TTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGTCTCCACCATCCAGTaGTCACTCTGGACAGAATCG +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPVSTIQ*SLWTES
Trigger: CGATTCTGTCCAGAGTGAGCACTGGATGGTGGAGAC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACGCGGGACGTCTCTTCTaGCTTTCTCCAAGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNAGRLF*LSPSQA
Trigger: GGCTTGACTTGGAGAAAGGCAGAAGAGACGTCCCGC...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTGGGGCAATGGACTCTaGACAGATGGGACAGTTAAG +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTWGNGL*TDGTVK
Trigger: CTTAACTGTCCCATCTGTGCAGAGTCCATTGCCCCA...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGGCTATTCATCTCTGGTaGTCCAATGCCTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQAIHLW*SNAYPS
Trigger: GCTGGGGTAGGCATTGGAGCACCAGAGATGAATAGC...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGCTATTCATCTCTGGTaGTCCAATGCCTACCCCAGC +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPAIHLW*SNAYPS
Trigger: GCTGGGGTAGGCATTGGAGCACCAGAGATGAATAGC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAATGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RSVCSSRGWGPGFSLFTQWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...TTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACCTCTTTCACCACACATaGCTGGCCCGCATGCACGAT +
Preference number: 4 (lower is better)
Translates to: VCSSRGWGPGFSLFTQVHLFHHT*LARMHD
Trigger: ATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAG...GTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACCTGTTACAAGGCACTaGAGCATGAGGGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTPVTRH*SMRVSP
Trigger: GGGGGACACCCTCATGCTGCAGTGCCTTGTAACAGG...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATGATCCTGTTACAAGGCACTaGAGCATGAGGGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LPQKKLLMKSRPSHGQNDPVTRH*SMRVSP
Trigger: GGGGGACACCCTCATGCTGCAGTGCCTTGTAACAGG...ATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTCTTCTTGGCAGGGTTaGCCACATTGTTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GQYAHHEGGGQASHCLHKSSWQG*PHCWWL
Trigger: CAGCCACCAACAATGTGGGCAACCCTGCCAAGAAGA...CTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACCCGCTTGGACATGCGTaGCGGCTTGCCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: VCSSRGWGPGFSLFTQVHPLGHA*RLAILE
Trigger: TTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGG...GTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCGAGGTCGGGCACGGGTaGCCCTGGGAAAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICEVGHG*PWERSH
Trigger: ATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTC...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGTTGACCACCGCATTGTaGTGGTTCAACTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: SSRGWGPGFSLFTQVHSLLTTAL*WFNWRM
Trigger: CATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAA...CAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp ACTAACCTTGCACGGTCCCCCAGCTCCCGAGGCCTCGATGTCTCGATGAACATGGATTTGGGGTCACTTTaGAAATGCTCATCACTGCCT +
Preference number: 4 (lower is better)
Translates to: TNLARSPSSRGLDVSMNMDLGSL*KCSSLP
Trigger: AGGCAGTGATGAGCATTTGCAAAGTGACCCCAAATC...CATGTTCATCGAGACATCGAGGCCTCGGGAGCTGGGGGACCGTGCAAGGTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACACCTTGAATCCAAAATaGCCATCTGGTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDTLNPK*PSGSGK
Trigger: TTTTCCTGAACCAGATGGGCATTTTGGATTCAAGGT...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTTGACCCACCCGCATGCACGATCTaGGCCTGGGCTGGAGCTAGC +
Preference number: 4 (lower is better)
Translates to: DAESSIPLHSCSSVQLDPPACTI*AWAGAS
Trigger: GCTAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGG...TGGGTCAAGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACCCCTCAAAAATAATCTaGAAGGGCCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RSKRPELKLQGIFNSACHPSKII*KGPLGL
Trigger: CAGCCCCAGTGGGCCCTTCCAGATTATTTTTGAGGG...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAGCGGGGGTCAGTCTTTaGTACAATGTGGACACTTTG +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGAGVSL*YNVDTL
Trigger: CAAAGTGTCCACATTGTACCAAAGACTGACCCCCGC...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCACTACAGAACAGGGCTaGACAGAGTCTATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGTTEQG*TESIQP
Trigger: TGGCTGAATAGACTCTGTCCAGCCCTGTTCTGTAGT...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAACTGATACAGAGATGCTaGCTCACAGGCACACACAGA +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQLIQRC*LTGTHR
Trigger: TCTGTGTGTGCCTGTGAGCCAGCATCTCTGTATCAG...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQSRTWR*HCRGDS
Trigger: TGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQRHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCCCTTGTCCCCGGCAGTaGAAGGGGATCAGCGCCAGA +
Preference number: 4 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICPCPRQ*KGISAR
Trigger: TCTGGCGCTGATCCCCTTCCACTGCCGGGGACAAGG...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCACCACACATGCCTaGCCCGCATGCACGATCTGC +
Preference number: 4 (lower is better)
Translates to: WEPQWMQNLLSHSILVHQFTTHA*PACTIC
Trigger: GCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAA...CTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTACATCGCTCACCGTCTaGTGCACCGTCAGCATTGGC +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCTSLTV*CTVSIG
Trigger: GCCAATGCTGACGGTGCACCAGACGGTGAGCGATGT...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTGATAGCTTCAGGTCCTaGCCCAGCTGGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFDSFRS*PSWMFS
Trigger: TGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATC...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTAGGCACTGCATCCACGTaGCACGATAGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVCSSRGWGPGFSLFTQVGTAST*HDSFRS
Trigger: GGACCTGAAGCTATCGTGCCACGTGGATGCAGTGCC...TACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp GGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCAGGCACTGCATCCACGTaGCACGATAGCTTCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GLGAPVDAESSIPLHSCSGTAST*HDSFRS
Trigger: GGACCTGAAGCTATCGTGCCACGTGGATGCAGTGCC...TGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAATCCCCAGGAAAGAGTaGTCCTTCTGCCCCAACACA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPIPRKE*SFCPNT
Trigger: TGTGTTGGGGCAGAAGGACCACTCTTTCCTGGGGAT...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGAGGGCCACCAGAGTTaGGCTGAGATGGTGATTATG +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENEGHQS*AEMVIM
Trigger: CATAATCACCATCTCAGCCCAACTCTGGTGGCCCTC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCAGCCTTCTAAGTTTTTaGGCCCTGTTGGCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: EDILGGSSGLPERTFQEASLLSF*ALLAFA
Trigger: TGCAAAGGCCAACAGGGCCCAAAAACTTAGAAGGCT...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGTCCACACCCTTGATTTaGGGTCACTTTGCAAATGCT +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRSTPLI*GHFANA
Trigger: AGCATTTGCAAAGTGACCCCAAATCAAGGGTGTGGA...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCGATGTGTTTCCCGTACATGTCCACACCCTTGATTTaGGGTCACTTTGCAAATGCT +
Preference number: 4 (lower is better)
Translates to: LFRDRTRRLREPMCFPYMSTPLI*GHFANA
Trigger: AGCATTTGCAAAGTGACCCCAAATCAAGGGTGTGGA...CATGTACGGGAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGAGGTGGCAGTTAGGCTaGTCTGGAAGGTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLRWQLG*SGRSEA
Trigger: TGCCTCAGACCTTCCAGACCAGCCTAACTGCCACCT...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGAGGTGGCAGTTAGGCTaGTCTGGAAGGTCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GGVLVIHSHLPQKKLLMKRWQLG*SGRSEA
Trigger: TGCCTCAGACCTTCCAGACCAGCCTAACTGCCACCT...CTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp CCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCAGGGTGGTGGAGTCCTaGTCATCCACTCTCACCTAC +
Preference number: 4 (lower is better)
Translates to: PGHPLSPTPEEASYEVQTRVVES*SSTLTY
Trigger: GTAGGTGAGAGTGGATGACCAGGACTCCACCACCCT...GGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR CAA 72 bp GACCCAGCCACGGGCAAAATGATCTGTGCAAATGGTTaGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCA +
Preference number: 4 (lower is better)
Translates to: DPATGKMICANG*GAPVDAESSIP
Trigger: TGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR TCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCCCCCTTCTTCAGTGTaGCGTCATCTATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGPPSSV*RHLWQY
Trigger: ATATTGCCATAGATGACGTCACACTGAAGAAGGGGG...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTTCAAGGAATCTGGGGTaGCCTATGGTCTCCACCATC +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCSRNLG*PMVSTI
Trigger: GATGGTGGAGACCATAGGTCACCCCAGATTCCTTGA...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGCAAGTAGATAAGAAATaGAGGCCCCTCTCCACTTCC +
Preference number: 4 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVQVDKK*RPLSTS
Trigger: GGAAGTGGAGAGGGGCCTTCATTTCTTATCTACTTG...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGTCATCCATAGGGGATaGAAGGTGGAATTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPVIHRG*KVEFQA
Trigger: GGCCTGAAATTCCACCTTTCATCCCCTATGGATGAC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGACACTCATTCCTGCTaGGGAACACACAAACACACA +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDDTHSC*GTHKHT
Trigger: TGTGTGTTTGTGTGTTCCTCAGCAGGAATGAGTGTC...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAAGGTGGTATAGGGTGTaGGGCGGACCTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: YAHHEGGGQASHCLHKYTRWYRV*GGPHSC
Trigger: ACAGCTATGAGGTCCGCCTCACACCCTATACCACCT...TGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp GCTCACTGCAACCTTCACCACCGATGTGTTTCCCGTACATGTGGTAGAAGAAGGGCCTCGATGTCTCGATaGACATGTAGTAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: AHCNLHHRCVSRTCGRRRASMSR*TCSSPQ
Trigger: CTGAGGGCTACTACATGTTCATCGAGACATCGAGGC...CCTTCTTCTACCACATGTACGGGAAACACATCGGTGGTGAAGGTTGCAGTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502298.1
CDS-3UTR TCA 90 bp CACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTGCGCAGCGTCTCGTTaGACACCGATGTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: HSILVHQFSLTHHPSCGNCAASR*TPMSPG
Trigger: TCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCA...GTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATCCGGCTTGCCATTCTTaGACCACTGGTAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYPACHS*TTGRSP
Trigger: AGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCGG...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTTACCCTTGGGCACACTaGTGGTGGGCGGCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PSGCRIFYPTPFLFISSAYPWAH*WWAALS
Trigger: AGACAGTGCCGCCCACCATCAGTGTGCCCAAGGGTA...AGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCACACATGAGAACATGCTaGCCTTCACTCCTAGCCCAA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPHMRTC*PSLLAQ
Trigger: TTGGGCTAGGAGTGAAGGTCAGCATGTTCTCATGTG...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGAAGAGGATGAGCACATaGGAACATGCTGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTKRMST*EHADLH
Trigger: GTGAAGGTCAGCATGTTCTCATGTGCTCATCCTCTT...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATTTGGTTGGTATTTGCTaGATGAACAAATGCACACAA +
Preference number: 4 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHLVGIC*MNKCTQ
Trigger: TTGTGTGCATTTGTTCATTCAGCAAATACCAACCAA...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGATCTGGAACATGGAAGTaGAACTGCCCAATCGACCTA +
Preference number: 4 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRSGTWK*NCPIDL
Trigger: TAGGTCGATTGGGCAGTTTCACTTCCATGTTCCAGA...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGAGAAGTTACCCAACATaGGAGCCAATAAAACTTAGG +
Preference number: 4 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRRSYPT*EPIKLR
Trigger: CCTAAGTTTTATTGGCTCTCATGTTGGGTAACTTCT...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGAGAAGTTACCCAACATaGGAGCCAATAAAACTTAGG +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWRSYPT*EPIKLR
Trigger: CCTAAGTTTTATTGGCTCTCATGTTGGGTAACTTCT...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATTTCTCTGCTCATCCTTaGAGCCAATGCAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYFSAHP*SQCRPP
Trigger: AGGGGGCCTGCATTGGCTGCAAGGATGAGCAGAGAA...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGATCTGTCCTTGTTCTCTaGTCATCCTTGCAGCCAATG +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGSVLVL*SSLQPM
Trigger: CATTGGCTGCAAGGATGAGCAGAGAACAAGGACAGA...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CCTGGGCACCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGCTTTCAACTAGACAGTaGTTTTTGGCATTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: PGHPSWRGSVFGTMWTLWLSTRQ*FLAFCP
Trigger: AGGGCAAAATGCCAAAAAGCACTGTCTAGTTGAAAG...CCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGGTGCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGACACAGACCTGTGTTTaGACACACTCCTGCCCAACA +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQTQTCV*THSCPT
Trigger: TGTTGGGCAGGAGTGTGTGCAAACACAGGTCTGTGT...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACCTAGACATTTACAGTaGCCACTGGCATACACTGAC +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGPRHLQ*PLAYTD
Trigger: GTCAGTGTATGCCAGTGGGCACTGTAAATGTCTAGG...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AGGGTAAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGACACTGATACAGAGATaGTGGCTCACAGGCACACAC +
Preference number: 4 (lower is better)
Translates to: RVKSEAHHECSKDKAYVATLIQR*WLTGTH
Trigger: GTGTGTGCCTGTGAGCCAGCATCTCTGTATCAGTGT...CGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGCTGGGAAAGAAGCCATaGACAGGTAGGTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: GQYAHHEGGGQASHCLHKLGKKP*TGRCHS
Trigger: ACTATGGCACCTACCTGTGCATGGCTTCTTTCCCAG...CTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACCTGGGAAAGAAGCCATaGACAGGTAGGTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: RSKRPELKLQGIFNSACHLGKKP*TGRCHS
Trigger: ACTATGGCACCTACCTGTGCATGGCTTCTTTCCCAG...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AAACTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTCTGGCGGCCGCGGCTTaGCCCGCACCTCGCATTGCA +
Preference number: 4 (lower is better)
Translates to: KLLHDEPLYLHLLKVTPSLAAAA*PAPRIA
Trigger: TGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAG...AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGATATTCTGTTCCCTCTaGTCAGAAGCCTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWIFCSL*SEASPN
Trigger: ATTGGGAGAGGCTTCTGAGCAGAGGGAACAGAATAT...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTATTAGTCCTCCTCCTTTaGCCTTACTCCCCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLLVLLL*PYSPSL
Trigger: CAAGGAAGGGGAGTAAGGGCAAAGGAGGAGGACTAA...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGGATTTCTCTTCCTGTaGTCAGGGAGCCAACCTACA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPGFLFL*SGSQPT
Trigger: TGTAGGTTGGCTCCCTGAGCACAGGAAGAGAAATCC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTAGTGAACAGGTCAGTATaGTCATCACGAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SVCSSRGWGPGFSLFTQVVNRSV*SSRGWG
Trigger: CCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC...TACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp GGAAGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCAGAGATCCTCCCTTCTaGTGTATCTGGCCAAAGATT +
Preference number: 4 (lower is better)
Translates to: GSQMEMRGLGRVVESWSSRDPPF*CIWPKI
Trigger: AATCTTTGGCCAGATACAGCAGAAGGGAGGATCTCT...GGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACACCTTCCTTGTCTCCTaGACGTGGGACAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNTFLVS*TWDSHR
Trigger: TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGT...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGACCTTCCTTGTCTCCTaGACGTGGGACAGTCACAGA +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLTFLVS*TWDSHR
Trigger: TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGT...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAATCCAGTGCTCACTCTaGACAGAATCGTGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPIQCSL*TESCAA
Trigger: TGCTGCACACGATTCTGTCCAGAGTGAGCACTGGAT...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACCTAGACAGTGCTTTTTaGCATTTTGCCCTGTACACA +
Preference number: 4 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHLDSAF*HFALYT
Trigger: TGTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAG...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAACTACAGAACAGGGCTaGACAGAGTCTATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: AVQGFQRERSKRPELKLQTTEQG*TESIQP
Trigger: TGGCTGAATAGACTCTGTCCAGCCCTGTTCTGTAGT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACATAGGGGATGAAAGGTaGAATTTCAGGCCATCGCAG +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDIGDER*NFRPSQ
Trigger: CTGCGATGGCCTGAAATTCCACCTTTCATCCCCTAT...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACACCCGACAGACGCGATaGAAGTGTATGCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNTRQTR*KCMLRT
Trigger: GGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAAGCTCACAGTCTAGTTaGGGCAATGGACTCTGCACA +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLSSQSS*GNGLCT
Trigger: TGTGCAGAGTCCATTGCCCCAACTAGACTGTGAGCT...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCAAAGAGGGAGCACTTaGGGCTATTCATCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENQRGST*GYSSLV
Trigger: CACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTATTTACAGTGCCCACTaGCATACACTGACACCCACA +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAIYSAH*HTLTPT
Trigger: TGTGGGTGTCAGTGTATGCCAGTGGGCACTGTAAAT...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGAACACCGATGTCTCCTaGAACTTGTCCGAGGCGCTA +
Preference number: 4 (lower is better)
Translates to: MLITRVGARLLIVYTSTQNTDVS*NLSEAL
Trigger: TAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTT...CTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACCATTGTCCTGGCTGTaGGATAGGGTATCGGAACCC +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTPLSWL*DRVSEP
Trigger: GGGTTCCGATACCCTATCCCACAGCCAGGACAATGG...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp ATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGAGTGCCCACATTGTTGGTaGCTGTGCAGTTGTAGTAGC +
Preference number: 4 (lower is better)
Translates to: ITRVGARLLIVYTSTQPECPHCW*LCSCSS
Trigger: GCTACTACAACTGCACAGCCACCAACAATGTGGGCA...CTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGTTGCCCACATTGTTaGTGGCTGTGCAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENGCPHC*WLCSCS
Trigger: ACTACAACTGCACAGCCACCAACAATGTGGGCAACC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GATACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCAACGTCAGGAGTGATCTaGAATGTAGCGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: DTVNRSVCSSRGWGPGFSTSGVI*NVAFFM
Trigger: CATGAAGAACGCTACATTCCAGATCACTCCTGACGT...TGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACAGGTCCTGGCCCAGCTaGATGTTCTCACTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNRSWPS*MFSLSL
Trigger: CAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCT...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGAGGTCCTGGCCCAGCTaGATGTTCTCACTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GGVLVIHSHLPQKKLLMKRSWPS*MFSLSL
Trigger: CAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCT...CTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTAGGTCCTGGCCCAGCTaGATGTTCTCACTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCRSWPS*MFSLSL
Trigger: CAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCT...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGGATAGCTTCAGGTCCTaGCCCAGCTGGATGTTCTCA +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLDSFRS*PSWMFS
Trigger: TGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATC...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACGTAGGAGTAGTTCTTaGACAGCTTGTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: SVCSSRGWGPGFSLFTQVRRSSS*TACGCG
Trigger: CCCGCAGCCACAAGCTGTCCAAGAACTACTCCTACG...TACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACAACCACCGCATTGTGCTaGTTCAACTGGCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTTTALC*FNWRML
Trigger: CAGCATCCGCCAGTTGAACCAGCACAATGCGGTGGT...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATCGGGGTGGGCTGGGGTaGTCAGACATGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNRGGLG*SDMWAW
Trigger: CCAGGCCCACATGTCTGACCACCCCAGCCCACCCCG...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGGTTGCAACTCCTGTTTaGATTTCTGAGTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVVATPV*ISECPS
Trigger: GGATGGGCACTCAGAAATCCAAACAGGAGTTGCAAC...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCACAGGAAGGATAACATaGGATTTGCAGCCATCTTTA +
Preference number: 4 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASTGRIT*DLQPSL
Trigger: TAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGT...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGCTCATCACTGCCTATCCCCATGACCTTGGCAAGCCCATCTCACCTACAATATAGATGGCTGGAAGGCTaGACTCAGCTGGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: CSSLPIPMTLASPSHLQYRWLEG*TQLGWS
Trigger: TGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATCT...ATATTGTAGGTGAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTGATGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATGTGCTTTGGTGGAGATaGCTGGAAGGCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: CANGLGAPVDAESSIPLHVLWWR*LEGWTQ
Trigger: CTGAGTCCAGCCTTCCAGCCATCTCCACCAAAGCAC...ATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACTATCTTCTGGTGCTTTaGTGGAGATGGCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: RSKRPELKLQGIFNSACHYLLVL*WRWLEG
Trigger: GCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATA...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp GAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCGACTCGGCAGGGTGGTaGAGTCCTGGTCATCCACTC +
Preference number: 4 (lower is better)
Translates to: ESSIPLHSCSSVQLDPSPDSAGW*SPGHPL
Trigger: GAGTGGATGACCAGGACTCCACCACCCTGCCGAGTC...GGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR TCA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTCCCCCTTCTTCAGTGTaGCGTCATCTATGGCAATAT +
Preference number: 4 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFPPSSV*RHLWQY
Trigger: ATATTGCCATAGATGACGTCACACTGAAGAAGGGGG...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCTCCAAATTCATTGTCTaGTATGGGGGCACCAAATCA +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSSKFIV*YGGTKS
Trigger: TGATTTGGTGCCCCCATATCAGACAATGAATTTGGA...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTTCCAAATTCATTGTCTaGTATGGGGGCACCAAATCA +
Preference number: 4 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCSKFIV*YGGTKS
Trigger: TGATTTGGTGCCCCCATATCAGACAATGAATTTGGA...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR TCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCTTCAGACAGAGGCCTTaGCTGGGTCAGGAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICFRQRP*LGQEGS
Trigger: GCTGCCTTCCTGACCCAGTCAAGGCCTCTGTCTGAA...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGGATGGAAGTGTATGCTaGGAACCTGGAGCGACTCAT +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLDGSVC*EPGATH
Trigger: ATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATC...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGGACACTCATTCCTGCTaGGGAACACACAAACACACA +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQDTHSC*GTHKHT
Trigger: TGTGTGTTTGTGTGTTCCTCAGCAGGAATGAGTGTC...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCATGTAGACACGCTCGCTaGTATTGTCCTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPCRHAR*YCPLSP
Trigger: TGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACA...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCACCGGCTTGCCATTCTTaGACCACTGGTAGGTCACCT +
Preference number: 4 (lower is better)
Translates to: LGAPVDAESSIPLHSCSSPACHS*TTGRSP
Trigger: AGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCGG...TGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTCCACCAGAGTTGGGCTaGGATGGTGATTATGTGGGT +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCPPELG*DGDYVG
Trigger: ACCCACATAATCACCATCTCAGCCCAACTCTGGTGG...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGTCATTTGCCTGATATaGTGTAGTCCATATCATGAC +
Preference number: 4 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTVICLI*CSPYHD
Trigger: GTCATGATATGGACTACATCATATCAGGCAAATGAC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACACGTTCCAAGAGGCCTaGGCTGAAGCTCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: HSILVHQFSLTHHPSCGNTFQEA*AEAPRH
Trigger: ATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGT...GTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR TCA 90 bp CGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTATCACTCAGACATTCTaGACCCCTATTCAGACCCAA +
Preference number: 4 (lower is better)
Translates to: REQVSMLITRVGARLLIVITQTF*TPIQTQ
Trigger: TTGGGTCTGAATAGGGGTTCAGAATGTCTGAGTGAT...AACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp GGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGAGAAGAAGCTTCTTATaGAGTCCAGACCCAGCCACG +
Preference number: 4 (lower is better)
Translates to: GGVLVIHSHLPQKKLLMKRRSFL*SPDPAT
Trigger: CGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCT...CTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATTATCAGTCTTCAGACTaGCCAGGCCCAAGACCCTGT +
Preference number: 4 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDYQSSD*PGPRPC
Trigger: ACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATA...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGTGGGGCAATGGACTCTaGACAGATGGGACAGTTAAG +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLWGNGL*TDGTVK
Trigger: CTTAACTGTCCCATCTGTGCAGAGTCCATTGCCCCA...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTCTGGTGGTTCTATTCTaGAGGCAAGGCCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCLVVLF*RQGQEP
Trigger: TGGTTCCTGGCCTTGCCTGCAGAATAGAACCACCAG...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTTGGGGGCCACATGTATaGAGTTCAGCTCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCWGPHV*SSAQPT
Trigger: TGTTGGCTGAGCTGAACTGCATACATGTGGCCCCCA...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGGTTAGCCAAACTCCCTaGAGTTGTTTGGCAGGAGAC +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLVSQTP*SCLAGD
Trigger: GTCTCCTGCCAAACAACTGCAGGGAGTTTGGCTAAC...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACCCGCTTGGACATGCGTaGCGGCTTGCCATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: HSILVHQFSLTHHPSCGNPLGHA*RLAILE
Trigger: TTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGG...GTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACATCGTTGGAGACGCTaGACTCGTAGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPHRWRR*TRSCRC
Trigger: GCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTTGACCACCGCATTGTaGTGGTTCAACTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: GQNDLCKWFGSPSGCRIFLTTAL*WFNWRM
Trigger: CATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAA...GAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATTTGACCACCGCATTGTaGTGGTTCAACTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDLTTAL*WFNWRM
Trigger: CATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAA...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAGAGAAGGGCAGCAGCTaGAGACACTGTGGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPEKGSS*RHCGGR
Trigger: CCTCCCACCACAGTGTCTGCAGCTGCTGCCCTTCTC...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACATATTCTGTTCCCTCTaGTCAGAAGCCTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHIFCSL*SEASPN
Trigger: ATTGGGAGAGGCTTCTGAGCAGAGGGAACAGAATAT...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGACCTTGAATCCAAAATaGCCATCTGGTTCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRTLNPK*PSGSGK
Trigger: TTTTCCTGAACCAGATGGGCATTTTGGATTCAAGGT...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAAGGGAATTAGACTCTaGCTCTCTACAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: GHPRWQFRASRENVPRGLKGIRL*LSTGRI
Trigger: TATCCTTCCTGTAGAGAGGCAGAGTCTAATTCCCTT...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACACCCTCAAAAATAATCTaGAAGGGCCCACTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YAHHEGGGQASHCLHKYTPSKII*KGPLGL
Trigger: CAGCCCCAGTGGGCCCTTCCAGATTATTTTTGAGGG...TGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGCTTGTAGGGTGGAGTaGGGAAGTTATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENACRVE*GSYQSS
Trigger: TGAAGACTGATAACTTCCCCACTCCACCCTACAAGC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACCCACTGCTTGTAGGGTaGAGTGGGGAAGTTATCAGT +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNPLLVG*SGEVIS
Trigger: ACTGATAACTTCCCCACTCCACCCTACAAGCAGTGG...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGATTCATTGTCTGATATaGGGGCACCAAATCACAGAA +
Preference number: 4 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGIHCLI*GHQITE
Trigger: TTCTGTGATTTGGTGCCCCCATATCAGACAATGAAT...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGTTCACTGCCCCTGGGTaGAGAAGGGAACTTTCAACT +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLFTAPG*RRELST
Trigger: AGTTGAAAGTTCCCTTCTCCACCCAGGGGCAGTGAA...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTTTCACTGCCCCTGGGTaGAGAAGGGAACTTTCAACT +
Preference number: 4 (lower is better)
Translates to: VVEEGDTVELGAGIVEGTFTAPG*RRELST
Trigger: AGTTGAAAGTTCCCTTCTCCACCCAGGGGCAGTGAA...AGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCTGTATGCTGAGAACCTaGAGCGACTCATTTCAGACA +
Preference number: 4 (lower is better)
Translates to: RGHPRWQFRASRENVPRGCMLRT*SDSFQT
Trigger: TGTCTGAAATGAGTCGCTCCAGGTTCTCAGCATACA...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGCTTTTTAAAGGACTCTaGTGGTTCTATTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAELFKGL*WFYSAG
Trigger: GCCTGCAGAATAGAACCACCAGAGTCCTTTAAAAAG...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCACTGGGGAGATGTGCTaGATCCAGCCAGCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICTGEMC*IQPAWS
Trigger: AGACCAGGCTGGCTGGATCCAGCACATCTCCCCAGT...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTGCTTAAAGTCACTCCGTCTACCATTACGGCTGAGGAAAACAGTGAAGATGCTTGCCACTTATGTCGGTaGGGGGACCAGTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLKVTPSTITAEENSEDACHLCR*GDQCWG
Trigger: CCCCCAACACTGGTCCCCCCACCGACATAAGTGGCA...AGCATCTTCACTGTTTTCCTCAGCCGTAATGGTAGACGGAGTGACTTTAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNSRTWR*HCRGDS
Trigger: TGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACT...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGGTTGCCCACATTGTTaGTGGCTGTGCAGTTGTAGT +
Preference number: 4 (lower is better)
Translates to: RSVCSSRGWGPGFSLFTQGCPHC*WLCSCS
Trigger: ACTACAACTGCACAGCCACCAACAATGTGGGCAACC...TTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp CAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTACGTCAGGAGTGATCTaGAATGTAGCGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: QGGGVLVIHSHLPQKKLLTSGVI*NVAFFM
Trigger: CATGAAGAACGCTACATTCCAGATCACTCCTGACGT...AAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACCGAGCCCACATCGTTaGAGACGCTGCACTCGTAGC +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPPSPHR*RRCTRS
Trigger: GCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCAACCACCGCATTGTGCTaGTTCAACTGGCGGATGCTG +
Preference number: 4 (lower is better)
Translates to: MICANGLGAPVDAESSIPTTALC*FNWRML
Trigger: CAGCATCCGCCAGTTGAACCAGCACAATGCGGTGGT...TGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCTCATCCTCAAAGTaGCAGGTGTTGTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: QSNSEDILGGSSGLPERTFSSSK*QVLSER
Trigger: CCTTTCAGACAACACCTGCCACTTTGAGGATGAGAA...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTTTCTCATCCTCAAAGTaGCAGGTGTTGTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAFSSSK*QVLSER
Trigger: CCTTTCAGACAACACCTGCCACTTTGAGGATGAGAA...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACCCAACCTCAGCCAGTaGCTCTGCAGGGACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPPNLSQ*LCRDSP
Trigger: TGGAGAGTCCCTGCAGAGCCACTGGCTGAGGTTGGG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAGGGCATGAGGAGTTTTaGCTTTTCTCCCAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGGHEEF*LFSQVF
Trigger: AAAGACTTGGGAGAAAAGCCAAAACTCCTCATGCCC...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGAGCCTTCTAAGTTTTTaGGCCCTGTTGGCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQSLLSF*ALLAFA
Trigger: TGCAAAGGCCAACAGGGCCCAAAAACTTAGAAGGCT...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTTATCTTCTGGTGCTTTaGTGGAGATGGCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: VVEEGDTVELGAGIVEGTYLLVL*WRWLEG
Trigger: GCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATA...AGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACAGTCTTGCACCTTTATTaGGATCCGTCTGCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTVLHLY*DPSASG
Trigger: CCCGGAAGCAGACGGATCCCAATAAAGGTGCAAGAC...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
3UTR CAA 72 bp CAGAAGGAGCCCTGTGATGCTCCTCACCAAAGGTGCTaGCATTCAATAGGGTCATCTGTAAGCTCTCCGTCA +
Preference number: 4 (lower is better)
Translates to: QKEPCDAPHQRC*HSIGSSVSSPS
Trigger: TGACGGAGAGCTTACAGATGACCCTATTGAATGCAAGCACCTTTGGTGAGGAGCATCACAGGGCTCCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACTGTAGACACGCTCGCTaGTATTGTCCTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: QYAHHEGGGQASHCLHKYCRHAR*YCPLSP
Trigger: TGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACA...GTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR TCA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGAAATTCTAGAATTCTaGGAGGTCTGGGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SEQLRGHPRWQFRASRENEILEF*EVWGKG
Trigger: CCCTTTACCCCAGACCTCTCAGAATTCTAGAATTTC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGTTCCTGTCATTTGCCTaGTATGATGTAGTCCATATC +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEFLSFA*YDVVHI
Trigger: GATATGGACTACATCATATCAGGCAAATGACAGGAA...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGTGTAACCAAGTAACCTaGAAGACACTTCCTGTCATT +
Preference number: 4 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWCNQVT*KTLPVI
Trigger: AATGACAGGAAGTGTCTTTCAGGTTACTTGGTTACA...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTGTAACCAAGTAACCTaGAAGACACTTCCTGTCATT +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGICNQVT*KTLPVI
Trigger: AATGACAGGAAGTGTCTTTCAGGTTACTTGGTTACA...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCTGGAACATGGAAGTaGAACTGCCCAATCGACCTA +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNSGTWK*NCPIDL
Trigger: TAGGTCGATTGGGCAGTTTCACTTCCATGTTCCAGA...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AGGGTAAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGCTTGGTCTTGTAATCTaGGCTTCAGTTTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: RVKSEAHHECSKDKAYVALGLVI*ASVSPS
Trigger: AGATGGGGAAACTGAAGCTCAGATTACAAGACCAAG...CGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGATCCTAGAGCTACCTTaGATCCAAAATGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQILELP*IQNAHL
Trigger: CAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGAT...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACAGTCAGAGCCACATaGTTCCCATCACTCAGACAT +
Preference number: 4 (lower is better)
Translates to: VSMLITRVGARLLIVYTSTVRAT*FPSLRH
Trigger: ATGTCTGAGTGATGGGAATCATGTGGCTCTGACTGT...ACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR GCA 90 bp TTCTGTGGACGATGTGTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGATGGGTGAGGGCATTCTaGCGCGTCCAGTCAAAGTTG +
Preference number: 4 (lower is better)
Translates to: FCGRCVSRTCGRRRRHSRWVRAF*RVQSKL
Trigger: CAACTTTGACTGGACGCGGCAGAATGCCCTCACCCA...TCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAACACATCGTCCACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR GCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAAGTAGCCCTCAGGGGTaGCACTTATGTCGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSSSPQG*HLCRWG
Trigger: CCCCCACCGACATAAGTGGCACCCCTGAGGGCTACT...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACCTGTTACAAGGCACTaGAGCATGAGGGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPPVTRH*SMRVSP
Trigger: GGGGGACACCCTCATGCTGCAGTGCCTTGTAACAGG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp ACCTTCACCACCGATGTGTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTATTGACCACCGCATTGTaGTGGTTCAACTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: TFTTDVFPVHVVEEGDTVLTTAL*WFNWRM
Trigger: CATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAA...TACTGTGTCTCCTTCTTCTACCACATGTACGGGAAACACATCGGTGGTGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502298.1
CDS-3UTR GCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGAAAACCATCCCTGTTaGAACTCCTGTTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAENHPC*NSCLDF
Trigger: GAAATCCAAACAGGAGTTGCAACAGGGATGGTTTTC...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGCATGTCACATTCTATTaGACAAACAAGGCACTAAGA +
Preference number: 4 (lower is better)
Translates to: WGLRLGENRVLRSPTACRHVTFY*TNKALR
Trigger: TCTTAGTGCCTTGTTTGTGCAATAGAATGTGACATG...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATTCATGCTGTTTCTTCTaGTTCGCGGGTACAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GWWSPGHPLSPTPEEASYSCCFF*FAGTER
Trigger: TCTTTCTGTACCCGCGAAGCAGAAGAAACAGCATGA...ATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTTGTAGGGTGGAGTaGGGAAGTTATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCACRVE*GSYQSS
Trigger: TGAAGACTGATAACTTCCCCACTCCACCCTACAAGC...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCATCTCTCTCCCATGGATaGCTAGGTGGGGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPSLSHG*LGGGSG
Trigger: ACCTGAGCCCCCACCTAGCCATCCATGGGAGAGAGA...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTTCAGAACCTCTGAGGTaGGAACCAAGCAGCAATACT +
Preference number: 4 (lower is better)
Translates to: VVEEGDTVELGAGIVEGTSEPLR*EPSSNT
Trigger: AGTATTGCTGCTTGGTTCCCACCTCAGAGGTTCTGA...AGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCGGGGCTATTCATCTCTaGTGCTCCAATGCCTACCCC +
Preference number: 4 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICGAIHL*CSNAYP
Trigger: GGGGTAGGCATTGGAGCACCAGAGATGAATAGCCCC...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: RRRRHSRTWRWHCRGDSLRHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...TAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CCA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACAAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: SMLITRVGARLLIVYTSTRHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCTTCTCATCCTCAAAGTaGCAGGTGTTGTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: CSSRGWGPGFSLFTQVHSFSSSK*QVLSER
Trigger: CCTTTCAGACAACACCTGCCACTTTGAGGATGAGAA...GCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CCA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATCAAGAGGGCAAGGGGTaGGGTGGGCAGATGCCATCC +
Preference number: 4 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNQEGKG*GGQMPS
Trigger: GGATGGCATCTGCCCACCCCACCCCTTGCCCTCTTG...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGCTCTCCCAAGACTGGCTCTACTCAAACTAGCTGTGTGACCTTGGGCCACTCCACAGGAAGGATAACATaGGATTTGCAGCCATCTTTA +
Preference number: 4 (lower is better)
Translates to: GSPKTGSTQTSCVTLGHSTGRIT*DLQPSL
Trigger: TAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGT...GGAGTGGCCCAAGGTCACACAGCTAGTTTGAGTAGAGCCAGTCTTGGGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTTCTCCAGGGTGGTGGAGTCCTaGTCATCCACTCTCACCTAC +
Preference number: 4 (lower is better)
Translates to: ILVHQFSLTHHPSCGNFSRVVES*SSTLTY
Trigger: GTAGGTGAGAGTGGATGACCAGGACTCCACCACCCT...GGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR CAA 72 bp GGGTGGAGAAGGGAACTTTCAACTAGACAGTGCTTTTaGGCATTTTGCCCTGTACACACCCTCCTATCCAGG +
Preference number: 4 (lower is better)
Translates to: GWRRELSTRQCF*AFCPVHTLLSR
Trigger: CCTGGATAGGAGGGTGTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAGTTGAAAGTTCCCTTCTCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 72 bp TTGCCCTTACTCCCCTTCCTTGAGCCTTCTAAGTTTTaGGGCCCTGTTGGCCTTTGCATATTCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LPLLPFLEPSKF*GPVGLCIFCSL
Trigger: GAGGGAACAGAATATGCAAAGGCCAACAGGGCCCAAAAACTTAGAAGGCTCAAGGAAGGGGAGTAAGGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATGACTCCGCTGAACCCTaGACCCAACCTCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNDSAEP*TQPQPV
Trigger: CACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTC...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCTTGGTATTTGCTGAATaGACAAATGCACACAAGTTC +
Preference number: 4 (lower is better)
Translates to: VQGFQRERSKRPELKLQGLVFAE*TNAHKF
Trigger: GAACTTGTGTGCATTTGTTCATTCAGCAAATACCAA...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTGGTTGGTATTTGCTaGATGAACAAATGCACACAA +
Preference number: 4 (lower is better)
Translates to: QGFQRERSKRPELKLQGILVGIC*MNKCTQ
Trigger: TTGTGTGCATTTGTTCATTCAGCAAATACCAACCAA...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGGAAATTCTAGAATTCTaGGAGGTCTGGGGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLEILEF*EVWGKG
Trigger: CCCTTTACCCCAGACCTCTCAGAATTCTAGAATTTC...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACGTCATTTGCCTGATATaGTGTAGTCCATATCATGAC +
Preference number: 4 (lower is better)
Translates to: AETSISCYTAPGPRSPFHVICLI*CSPYHD
Trigger: GTCATGATATGGACTACATCATATCAGGCAAATGAC...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp GAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACGAAACTTCTCCACGATaGGCCTTTATATCTACATTT +
Preference number: 4 (lower is better)
Translates to: EMRGLGRVVESWSSTLTYETSPR*AFISTF
Trigger: AAATGTAGATATAAAGGCTCATCGTGGAGAAGTTTC...GTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR GCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAAGGCCCAAGACCCTGTaGTGGGTCCCTTCAAAGGGT +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSRPKTL*WVPSKG
Trigger: ACCCTTTGAAGGGACCCAGCACAGGGTCTTGGGCCT...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTGCTCCTCACCAAAGGTaGTTGCATTCAATAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCAPHQR*LHSIGS
Trigger: TGACCCTATTGAATGCAAGCACCTTTGGTGAGGAGC...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCATCTCCTGGTAGAAGTTaGCTCGCACATCGCTCACCG +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPSPGRS*LAHRSP
Trigger: CGGTGAGCGATGTGCGAGGCAACTTCTACCAGGAGA...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGATTTGGGGTCACTTTaGAAATGCTCATCACTGCCT +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCDLGSL*KCSSLP
Trigger: AGGCAGTGATGAGCATTTGCAAAGTGACCCCAAATC...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAGAAAACCATCCCTGTTaGAACTCCTGTTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLENHPC*NSCLDF
Trigger: GAAATCCAAACAGGAGTTGCAACAGGGATGGTTTTC...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAAGGGAATTAGACTCTaGCTCTCTACAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: QLRGHPRWQFRASRENVPKGIRL*LSTGRI
Trigger: TATCCTTCCTGTAGAGAGGCAGAGTCTAATTCCCTT...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGCATGTCACATTCTATTaGACAAACAAGGCACTAAGA +
Preference number: 4 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEHVTFY*TNKALR
Trigger: TCTTAGTGCCTTGTTTGTGCAATAGAATGTGACATG...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACATTCATAGAAACGAATaGGTCTCAATCCAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: SCTPISSGALVEMAGRLDIHRNE*VSIQSH
Trigger: GTGAGACTGGATTGAGACCCATTCGTTTCTATGAAT...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATATAGGGGATGAAAGGTaGAATTTCAGGCCATCGCAG +
Preference number: 4 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDIGDER*NFRPSQ
Trigger: CTGCGATGGCCTGAAATTCCACCTTTCATCCCCTAT...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCACAGGAGGAGGGGGCTTaGTCTTCAGGCTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSQEEGA*SSGFTQ
Trigger: CTGAGTGAAGCCTGAAGACCAAGCCCCCTCCTCCTG...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp GGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATTCTCATCCTCAAAGTaGCAGGTGTTGTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GLGAPVDAESSIPLHSCSFSSSK*QVLCSV
Trigger: CACAGAGCACAACACCTGCCACTTTGAGGATGAGAA...TGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp CTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTACCATTGAGCGTTTGGGGTTCTaGGTGAGGGCATTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: LHDEPLYLHLLKVTPSTIERLGF*VRAFCR
Trigger: GCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC...AATGGTAGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCAACACCGATGTCTCCTaGAACTTGTCCGAGGCGCTA +
Preference number: 4 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICNTDVS*NLSEAL
Trigger: TAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTT...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGACGTCAGGAGTGATCTaGAATGTAGCGTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLTSGVI*NVAFFM
Trigger: CATGAAGAACGCTACATTCCAGATCACTCCTGACGT...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTTTCTCATCCTCAAAGTaGCAGGTGTTGTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCFSSSK*QVLSER
Trigger: CCTTTCAGACAACACCTGCCACTTTGAGGATGAGAA...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTGTTGCAACTCCTGTTTaGATTTCTGAGTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCVATPV*ISECPS
Trigger: GGATGGGCACTCAGAAATCCAAACAGGAGTTGCAAC...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAAGATGGCTGGAAGGCTaGACTCAGCTGGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPRWLEG*TQLGWS
Trigger: TGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATCT...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCATATCTTCTGGTGCTTTaGTGGAGATGGCTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LGAPVDAESSIPLHSCSSYLLVL*WRWLEG
Trigger: GCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATA...TGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp TCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCCCCTTCTGCTGTATCTaGCCAAAGATTCTAGCATCA +
Preference number: 4 (lower is better)
Translates to: SVQMVWEPQWMQNLLSHSPFCCI*PKILAS
Trigger: TGATGCTAGAATCTTTGGCCAGATACAGCAGAAGGG...GGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGAATGATCTGTGCAAATaGTTTGGGAGCCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: WEPQWMQNLLSHSILVHQNDLCK*FGSPSG
Trigger: TCCACTGGGGCTCCCAAACCATTTGCACAGATCATT...CTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
3UTR CAA 72 bp CTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTaGACCCATCACCCTAGCTGTGGAAACTTCTCCACG +
Preference number: 4 (lower is better)
Translates to: LLSHSILVHQFS*THHPSCGNFST
Trigger: CGTGGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR TCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAGCTGGAGTTCGGCCTTaGCTTAGGGGACAGGGTAAA +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSAGVRP*LRGQGK
Trigger: TTTACCCTGTCCCCTAAGTCAAGGCCGAACTCCAGC...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp ATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCATGTAGACACGCTCGCTaGTATTGTCCTCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: MICANGLGAPVDAESSIPCRHAR*YCPLSP
Trigger: TGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACA...TGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR TCA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTTTGGTATTTGCTGAATaGACAAATGCACACAAGTTC +
Preference number: 4 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKALVFAE*TNAHKF
Trigger: GAACTTGTGTGCATTTGTTCATTCAGCAAATACCAA...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGTTGGTTGGTATTTGCTaGATGAACAAATGCACACAA +
Preference number: 4 (lower is better)
Translates to: VSEQLRGHPRWQFRASRELVGIC*MNKCTQ
Trigger: TTGTGTGCATTTGTTCATTCAGCAAATACCAACCAA...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR TCA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATCACTGCCTATCCCCATaGCCTTGGCAAGCCCATCTC +
Preference number: 4 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNHCLSP*PWQAHL
Trigger: GAGATGGGCTTGCCAAGGTCATGGGGATAGGCAGTG...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp GGGTATAGCCACAGATCTTCTCATCCTCAAAGTGGCAGGTGTTGTCTGAAAGGTTCTGTCCTTGTTCTCTaGTCATCCTTGCAGCCAATG +
Preference number: 4 (lower is better)
Translates to: GYSHRSSHPQSGRCCLKGSVLVL*SSLQPM
Trigger: CATTGGCTGCAAGGATGAGCAGAGAACAAGGACAGA...ACCTTTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGTGGCTATACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR GCA 90 bp GAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCCTGGGAAAGAAGCCATaGACAGGTAGGTGCCATAGT +
Preference number: 4 (lower is better)
Translates to: ESSIPLHSCSSVQLDPSPLGKKP*TGRCHS
Trigger: ACTATGGCACCTACCTGTGCATGGCTTCTTTCCCAG...GGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp ATCTCTCCCATTAAACAGGGGCTTCCACAAAGGCAGTGTTTGGTTGGTATTTGCTCCCATATCTTCTGGTaGTTTGGTGGAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: ISPIKQGLPQRQCLVGICSHIFW*FGGDGW
Trigger: CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGA...GCAAATACCAACCAAACACTGCCTTTGTGGAAGCCCCTGTTTAATGGGAGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TTCACCACCGATGTGTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTGCCCAGGATGGAGTaGAATGGTACAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: FTTDVFPVHVVEEGDTVELPRME*NGTISA
Trigger: AGCTGAGATTGTACCATTGCACTCCATCCTGGGCAG...TTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAACACATCGGTGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502298.1
CDS-3UTR CCA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATCAGGGCCTCAGTGCCTaGCCTCTGTCCTTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNQGLSA*PLSLFS
Trigger: AGAGAACAAGGACAGAGGCCAGGCACTGAGGCCCTG...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACCTTTTTAAAGGACTCTaGTGGTTCTATTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FQRERSKRPELKLQGIFNLFKGL*WFYSAG
Trigger: GCCTGCAGAATAGAACCACCAGAGTCCTTTAAAAAG...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp ATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTTCTCCAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: ILVHQFSLTHHPSCGNFSRHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...GGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp GTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTTCTCATCCTCAAAGTaGCAGGTGTTGTCTCATAGC +
Preference number: 4 (lower is better)
Translates to: VSRTCGRRRRHSRTWRWHFSSSK*QVLSHS
Trigger: GCTATGAGACAACACCTGCCACTTTGAGGATGAGAA...ATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000502298.1
ENST00000680397.1
CDS-3UTR CCA 90 bp CCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTGTTTGGGAGCCCCAGTaGATGCAGAATCTTCTATCC +
Preference number: 4 (lower is better)
Translates to: PSGCRIFYPTPFLFISSAVWEPQ*MQNLLS
Trigger: GGATAGAAGATTCTGCATCCACTGGGGCTCCCAAAC...AGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp GAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCGTTTGGGAGCCCCAGTaGATGCAGAATCTTCTATCC +
Preference number: 4 (lower is better)
Translates to: ESSIPLHSCSSVQLDPSPVWEPQ*MQNLLS
Trigger: GGATAGAAGATTCTGCATCCACTGGGGCTCCCAAAC...GGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp AATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTAATGATCTGTGCAAATaGTTTGGGAGCCCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: NGLGAPVDAESSIPLHSCNDLCK*FGSPSG
Trigger: TCCACTGGGGCTCCCAAACCATTTGCACAGATCATT...ACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAATCTGGGGTGACCTATaGTCTCCACCATCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSIWGDL*SPPSSA
Trigger: AGCACTGGATGGTGGAGACCATAGGTCACCCCAGAT...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGATTCATAGAAACGAATaGGTCTCAATCCAGTCTCAC +
Preference number: 4 (lower is better)
Translates to: FSRHILSIPGQAILKAGLIHRNE*VSIQSH
Trigger: GTGAGACTGGATTGAGACCCATTCGTTTCTATGAAT...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCATCAACCCCATTGTCCTaGCTGTGGGATAGGGTATCG +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSSTPLS*LWDRVS
Trigger: CGATACCCTATCCCACAGCCAGGACAATGGGGTTGA...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TATCTACATTTGCTTAAAGTCACTCCGTCTACCATTACGGCTGAGGAAAACAGTCGTAGGAGTAGTTCTTaGACAGCTTGTGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: YLHLLKVTPSTITAEENSRRSSS*TACGCG
Trigger: CCCGCAGCCACAAGCTGTCCAAGAACTACTCCTACG...ACTGTTTTCCTCAGCCGTAATGGTAGACGGAGTGACTTTAAGCAAATGTAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAGAAGGGTCTGCAGCCTaGGATGAGAGGCCAGAATTT +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSEGSAA*DERPEF
Trigger: AAATTCTGGCCTCTCATCCCAGGCTGCAGACCCTTC...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
3UTR CAA 72 bp ATAAGAAATGAAGGCCCCTCTCCACTTCCAAATTCATaGTCTGATATGGGGGCACCAAATCACAGAAGCGGG +
Preference number: 4 (lower is better)
Translates to: IRNEGPSPLPNS*SDMGAPNHRSG
Trigger: CCCGCTTCTGTGATTTGGTGCCCCCATATCAGACAATGAATTTGGAAGTGGAGAGGGGCCTTCATTTCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTATTCATTGTCTGATATaGGGGCACCAAATCACAGAA +
Preference number: 4 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCIHCLI*GHQITE
Trigger: TTCTGTGATTTGGTGCCCCCATATCAGACAATGAAT...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATACCCGACAGACGCGATaGAAGTGTATGCTGAGAACC +
Preference number: 4 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNTRQTR*KCMLRT
Trigger: GGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp CTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTACCAGTAGAACTTGGCGCTaGCATTGTAGAGGGGACTCA +
Preference number: 4 (lower is better)
Translates to: LLHDEPLYLHLLKVTPSTSRTWR*HCRGDS
Trigger: TGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACT...GGTAGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAAGACACAGTAGAACTTaGCGCTGGCATTGTAGAGGG +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSRHSRT*RWHCRG
Trigger: CCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCT...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CCA 90 bp AAACTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTAGATGGCTGGAAGGCTaGACTCAGCTGGGATGGTCA +
Preference number: 4 (lower is better)
Translates to: KLLHDEPLYLHLLKVTPSRWLEG*TQLGWS
Trigger: TGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATCT...AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CCA 90 bp CTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTACCTTCTTAAGCCAGTCCTaGTCCTACAGAGATCCTCCC +
Preference number: 4 (lower is better)
Translates to: LLHDEPLYLHLLKVTPSTFLSQS*SYRDPP
Trigger: GGGAGGATCTCTGTAGGACCAGGACTGGCTTAAGAA...GGTAGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR GCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAAGCTCTCATCATCTCTaGAACGCCAAGAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSSSHHL*NAKRKM
Trigger: CATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCT...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAACAGAGACCAGCACATaGCTAGACATTTACAGTGCC +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSTETST*LDIYSA
Trigger: GGCACTGTAAATGTCTAGGCATGTGCTGGTCTCTGT...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp AAACTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTGGGAGCCCCAGTGGATaGAGAATCTTCTATCCCACT +
Preference number: 4 (lower is better)
Translates to: KLLHDEPLYLHLLKVTPSGSPSG*RIFYPT
Trigger: AGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCC...AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAGTTTTTGGGCCCTGTTaGCCTTTGCATATTCTGTTC +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPVFGPC*PLHILF
Trigger: GAACAGAATATGCAAAGGCCAACAGGGCCCAAAAAC...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp AAACTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTCAGCCACGGGCAAAATaGTCTGTGCAAATGGTTTGG +
Preference number: 4 (lower is better)
Translates to: KLLHDEPLYLHLLKVTPSQPRAK*SVQMVW
Trigger: CCAAACCATTTGCACAGATCATTTTGCCCGTGGCTG...AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR TCA 90 bp AAACTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTGGGAGTAAACCCAAATaGACTGGTTGTCCTACCTGG +
Preference number: 4 (lower is better)
Translates to: KLLHDEPLYLHLLKVTPSGSKPK*TGCPTW
Trigger: CCAGGTAGGACAACCAGTTCATTTGGGTTTACTCCC...AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CCA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCAGGGCATGAGGAGTTTTaGCTTTTCTCCCAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSGHEEF*LFSQVF
Trigger: AAAGACTTGGGAGAAAAGCCAAAACTCCTCATGCCC...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR GCA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCACTTTCAACTAGACAGTaGTTTTTGGCATTTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPLSTRQ*FLAFCP
Trigger: AGGGCAAAATGCCAAAAAGCACTGTCTAGTTGAAAG...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR TCA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATTTGGTATTTGCTGAATaGACAAATGCACACAAGTTC +
Preference number: 4 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNLVFAE*TNAHKF
Trigger: GAACTTGTGTGCATTTGTTCATTCAGCAAATACCAA...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS TCA 90 bp CGGCCGCTGCCGTGGGCTCAGCGGCCCGACTCCAGGGGGCCGGGCTaGAAGCACTCGCGGCGGCGAAGCAGCCCCGGGCCCGGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: RPLPWAQRPDSRGPG*KHSRRRSSPGPGPP
Trigger: AGGAGGGCCGGGCCCGGGGCTGCTTCGCCGCCGCGAGTGCTTTCAGCCCGGCCCCCTGGAGTCGGGCCGCTGAGCCCACGGCAGCGGCCG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS TCA 90 bp CTGAAAGCACTCGCGGCGGCGAAGCAGCCCCGGGCCCGGCCCTCCTaGTCCGGGGAGCAGCGCGGGCTGGGTTCGGCCGAGGGACGAGCG +
Preference number: 5 (lower is better)
Translates to: LKALAAAKQPRARPS*SGEQRGLGSAEGRA
Trigger: CGCTCGTCCCTCGGCCGAACCCAGCCCGCGCTGCTCCCCGGATCAGGAGGGCCGGGCCCGGGGCTGCTTCGCCGCCGCGAGTGCTTTCAG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS TCA 90 bp CTGCCGCTGCTGTCGCGAGTTACGGCGTCGAGGCGCAGCTCCGCGTaGTCCGGCGCCTCGGCGGCGGCGGGAACAACAGGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: LPLLSRVTASRRSSA*SGASAAAGTTGGGG
Trigger: GCCGCCGCCGCCTGTTGTTCCCGCCGCCGCCGAGGCGCCGGATCACGCGGAGCTGCGCCTCGACGCCGTAACTCGCGACAGCAGCGGCAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 90 bp GGCGCCTCGGCGGCGGCGGGAACAACAGGCGGCGGCGGCAGCAGCTaGCCTTTGAAACGCCACACAGCCGAGGCGATGCGCTGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: GASAAAGTTGGGGSS*PLKRHTAEAMRWGL
Trigger: CAGCCCCCAGCGCATCGCCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCCGCCGCCGCCTGTTGTTCCCGCCGCCGCCGAGGCGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 90 bp CGGCGGCGGCGGGAACAACAGGCGGCGGCGGCAGCAGCTGCCCTTTaGAACGCCACACAGCCGAGGCGATGCGCTGGGGGCTGCCTCGCA +
Preference number: 5 (lower is better)
Translates to: RRRREQQAAAAAAAL*NATQPRRCAGGCLA
Trigger: TGCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCCGCCGCCGCCTGTTGTTCCCGCCGCCGCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 90 bp CGGGACCAGAGCACTGGCGGCCGCGGCTTGCCCCGCACCTCGCATTaGAGCTCGGCAGGCGATCCCTCGCGCACGGTCACCACGGCCCTA +
Preference number: 5 (lower is better)
Translates to: RDQSTGGRGLPRTSH*SSAGDPSRTVTTAL
Trigger: TAGGGCCGTGGTGACCGTGCGCGAGGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTCTGGTCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 90 bp GCAGGAGCACGGGCCGGCCCAGCGCCTGGCGCACGTCCTGGGAACTaGGCTCCACCTCCGGCGGGAACTGCACGTTCAGCTGCACCTGGG +
Preference number: 5 (lower is better)
Translates to: AGARAGPAPGARPGN*APPPAGTARSAAPG
Trigger: CCCAGGTGCAGCTGAACGTGCAGTTCCCGCCGGAGGTGGAGCCCAGTTCCCAGGACGTGCGCCAGGCGCTGGGCCGGCCCGTGCTCCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 90 bp CAGCCTCCTTGTCCACGCGGGACCAGAGCACTGGCGGCCGCGGCTTaGCCCGCACCTCGCATTGCAGCTCGGCAGGCGATCCCTCGCGCA +
Preference number: 5 (lower is better)
Translates to: QPPCPRGTRALAAAA*PAPRIAARQAIPRA
Trigger: TGCGCGAGGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTCTGGTCCCGCGTGGACAAGGAGGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 90 bp CGAGGGCAGCAGTGCAGCCTCCTTGTCCACGCGGGACCAGAGCACTaGCGGCCGCGGCTTGCCCCGCACCTCGCATTGCAGCTCGGCAGG +
Preference number: 5 (lower is better)
Translates to: RGQQCSLLVHAGPEH*RPRLAPHLALQLGR
Trigger: CCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTCTGGTCCCGCGTGGACAAGGAGGCTGCACTGCTGCCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 90 bp GGCAGCAGCTGCCCTTTGAAACGCCACACAGCCGAGGCGATGCGCTaGGGGCTGCCTCGCAGCAGCGAGCAGCGCAGGAGCACGGGCCGG +
Preference number: 5 (lower is better)
Translates to: GSSCPLKRHTAEAMR*GLPRSSEQRRSTGR
Trigger: CCGGCCCGTGCTCCTGCGCTGCTCGCTGCTGCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 90 bp AGAGAGAGAGCGGCGACGAAGACCAGGAGACTGAAGAGGCGGAGGTaGCGGCGACCCGTGTTTCTCCTCCGGCGGGGCCGCTGCCCGCGT +
Preference number: 5 (lower is better)
Translates to: RERAATKTRRLKRRR*RRPVFLLRRGRCPR
Trigger: ACGCGGGCAGCGGCCCCGCCGGAGGAGAAACACGGGTCGCCGCCACCTCCGCCTCTTCAGTCTCCTGGTCTTCGTCGCCGCTCTCTCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS GCA 90 bp GGCAGGCAGCCGAGCCCACATCGTTGGAGACGCTGCACTCGTAGCTaGCGCTGCTGTCGCGAGTTACGGCGTCGAGGCGCAGCTCCGCGT +
Preference number: 5 (lower is better)
Translates to: GRQPSPHRWRRCTRS*RCCRELRRRGAAPR
Trigger: ACGCGGAGCTGCGCCTCGACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGGCTGCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 90 bp CAGCCGAGCCCACATCGTTGGAGACGCTGCACTCGTAGCTGCCGCTaGTGTCGCGAGTTACGGCGTCGAGGCGCAGCTCCGCGTGATCCG +
Preference number: 5 (lower is better)
Translates to: QPSPHRWRRCTRSCR*CRELRRRGAAPRDP
Trigger: CGGATCACGCGGAGCTGCGCCTCGACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGCCCCGCACCTCGCATaGCAGCTCGGCAGGCGATCC +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHAPHLA*QLGRRS
Trigger: GGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS TCA 90 bp GGAACTGCACGTTCAGCTGCACCTGGGCCTCACGGGGGCGCACGTTaGAGCCATTATAGCGGGCCGTCTGGCAGCGGTAGGTCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: GTARSAAPGPHGGAR*SHYSGPSGSGRSRS
Trigger: TGAGCGGGACCTACCGCTGCCAGACGGCCCGCTATAATGGCTTCAACGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACGTGCAGTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 90 bp CACACTGCACGTTCAGCTGCACCTGGGCCTCACGGGGGCGCACGTTaGAGCCATTATAGCGGGCCGTCTGGCAGCGGTAGGTCCCGCTCA +
Preference number: 5 (lower is better)
Translates to: HTARSAAPGPHGGAR*SHYSGPSGSGRSRS
Trigger: TGAGCGGGACCTACCGCTGCCAGACGGCCCGCTATAATGGCTTCAACGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACGTGCAGTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS GCA 90 bp AGACCTGGAAGAGGCAGGCAGCCGAGCCCACATCGTTGGAGACGCTaGACTCGTAGCTGCCGCTGCTGTCGCGAGTTACGGCGTCGAGGC +
Preference number: 5 (lower is better)
Translates to: RPGRGRQPSPHRWRR*TRSCRCCRELRRRG
Trigger: GCCTCGACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGGCTGCCTGCCTCTTCCAGGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 90 bp GCCTGGCCCGCATGCACGATCTGCGCCTGGGCTGGAGCTAGCTCCTaGTGTTGTGCCGGGGACCATGCTGGATGCTGGATGCAATGCCAG +
Preference number: 5 (lower is better)
Translates to: AWPACTICAWAGASS*CCAGDHAGCWMQCQ
Trigger: CTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCACAACAGCAGGAGCTAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 90 bp GGTGGAAGCGGGGCTGGAAGGGATGCTGCCTGCTGCTGGAACGGCTaGAAGCTGGGATTGGACCGAGCTGAAAGGGGTGGAGCCTACGCC +
Preference number: 5 (lower is better)
Translates to: GGSGAGRDAACCWNG*KLGLDRAERGGAYA
Trigger: GGCGTAGGCTCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTCCAGCCCCGCTTCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS-3UTR CAA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCGCCCCGCACCTCGCATaGCAGCTCGGCAGGCGATCC +
Preference number: 5 (lower is better)
Translates to: QAILKAGLSAPTETSSSIAPHLA*QLGRRS
Trigger: GGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGC...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS TCA 90 bp GGCCGCCCTGCGTGCGTGCAATACGCTCGATGCGCAGCGTCTCGTTaGACACCGATGTCTCCTGGAACTTGTCCGAGGCGCTACCTGCCG +
Preference number: 5 (lower is better)
Translates to: GRPACVQYARCAASR*TPMSPGTCPRRYLP
Trigger: CGGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 90 bp TGCTGCCTGCTGCTGGAACGGCTGGAAGCTGGGATTGGACCGAGCTaGAAGGGGTGGAGCCTACGCCTTACGCAGGCGGAGCCCAGACGT +
Preference number: 5 (lower is better)
Translates to: CCLLLERLEAGIGPS*KGWSLRLTQAEPRR
Trigger: ACGTCTGGGCTCCGCCTGCGTAAGGCGTAGGCTCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS GCA 90 bp CTCGAAGAGCTGGGGCTGAGAGGGGTTTCTGGGCACCGAAGGGCCTaGACCTCTAGGGTGCCAGCTCACGAAACGTGTGCTGTCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LEELGLRGVSGHRRA*TSRVPAHETCAVWP
Trigger: GGGCCAGACAGCACACGTTTCGTGAGCTGGCACCCTAGAGGTGCAGGCCCTTCGGTGCCCAGAAACCCCTCTCAGCCCCAGCTCTTCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 90 bp CTTTGGCGGAGACCTGGAAGAGGCAGGCAGCCGAGCCCACATCGTTaGAGACGCTGCACTCGTAGCTGCCGCTGCTGTCGCGAGTTACGG +
Preference number: 5 (lower is better)
Translates to: LWRRPGRGRQPSPHR*RRCTRSCRCCRELR
Trigger: CCGTAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGGCTGCCTGCCTCTTCCAGGTCTCCGCCAAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
CDS CCA 90 bp GCGGGGCTGGAAGGGATGCTGCCTGCTGCTGGAACGGCTGGAAGCTaGGATTGGACCGAGCTGAAAGGGGTGGAGCCTACGCCTTACGCA +
Preference number: 5 (lower is better)
Translates to: AGLEGMLPAAGTAGS*DWTELKGVEPTPYA
Trigger: TGCGTAAGGCGTAGGCTCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTCCAGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 90 bp TTGTGGCGGAGACCTGGAAGAGGCAGGCAGCCGAGCCCACATCGTTaGAGACGCTGCACTCGTAGCTGCCGCTGCTGTCGCGAGTTACGG +
Preference number: 5 (lower is better)
Translates to: LWRRPGRGRQPSPHR*RRCTRSCRCCRELR
Trigger: CCGTAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGGCTGCCTGCCTCTTCCAGGTCTCCGCCACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGCGCTACCTGCCGTCTaGGTCCACCGTACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHALPAV*VHRTWG
Trigger: ACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCGC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACAGCAGTGCAGCCTCCTaGTCCACGCGGGACCAGAGC +
Preference number: 5 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDSSAAS*STRDQS
Trigger: GCTCTGGTCCCGCGTGGACAAGGAGGCTGCACTGCT...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS GCA 90 bp GGCTCTAACGCTGGTGGAAGCGGGGCTGGAAGGGATGCTGCCTGCTaGTGGAACGGCTGGAAGCTGGGATTGGACCGAGCTGAAAGGGGT +
Preference number: 5 (lower is better)
Translates to: GSNAGGSGAGRDAAC*WNGWKLGLDRAERG
Trigger: ACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTCCAGCCCCGCTTCCACCAGCGTTAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS GCA 90 bp AGGGGCTCTAACGCTGGTGGAAGCGGGGCTGGAAGGGATGCTGCCTaGTGCTGGAACGGCTGGAAGCTGGGATTGGACCGAGCTGAAAGG +
Preference number: 5 (lower is better)
Translates to: RGSNAGGSGAGRDAA*CWNGWKLGLDRAER
Trigger: CCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTCCAGCCCCGCTTCCACCAGCGTTAGAGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS GCA 90 bp GAGCTAGCTCCTGCTGTTGTGCCGGGGACCATGCTGGATGCTGGATaGAATGCCAGGCTGGAGTGGCCATCCCTGGTCCCTATGTGCCGC +
Preference number: 5 (lower is better)
Translates to: ELAPAVVPGTMLDAG*NARLEWPSLVPMCR
Trigger: GCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCACAACAGCAGGAGCTAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 90 bp GCAGGTTCTTCAGCTTCAGGACCTTGGTCTCCCCCTGGGCAGCAGTaGACCACTGGGGTGAGGTGCCTGCTTGAGTCTCCAGGGATCCCG +
Preference number: 5 (lower is better)
Translates to: AGSSASGPWSPPGQQ*TTGVRCLLESPGIP
Trigger: CGGGATCCCTGGAGACTCAAGCAGGCACCTCACCCCAGTGGTCCACTGCTGCCCAGGGGGAGACCAAGGTCCTGAAGCTGAAGAACCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CCA 90 bp CTGGAAGGGATGCTGCCTGCTGCTGGAACGGCTGGAAGCTGGGATTaGACCGAGCTGAAAGGGGTGGAGCCTACGCCTTACGCAGGCGGA +
Preference number: 5 (lower is better)
Translates to: LEGMLPAAGTAGSWD*TELKGVEPTPYAGG
Trigger: TCCGCCTGCGTAAGGCGTAGGCTCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 90 bp AGGGCCTGCACCTCTAGGGTGCCAGCTCACGAAACGTGTGCTGTCTaGCCCAGTGCCCCGCAACAACGTTCCAGAGAAGCTGCTGAGGGG +
Preference number: 5 (lower is better)
Translates to: RACTSRVPAHETCAV*PSAPQQRSREAAEG
Trigger: CCCCTCAGCAGCTTCTCTGGAACGTTGTTGCGGGGCACTGGGCCAGACAGCACACGTTTCGTGAGCTGGCACCCTAGAGGTGCAGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 90 bp TCCTCTTTCACCACACATGCCTGGCCCGCATGCACGATCTGCGCCTaGGCTGGAGCTAGCTCCTGCTGTTGTGCCGGGGACCATGCTGGA +
Preference number: 5 (lower is better)
Translates to: SSFTTHAWPACTICA*AGASSCCCAGDHAG
Trigger: TCCAGCATGGTCCCCGGCACAACAGCAGGAGCTAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRVSRAP*FRDRTR
Trigger: CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACAC...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: VGGAFGVLGEGILPRPVKGDSLT*HGPPAP
Trigger: GGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCC...TTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATAAGCGGGCAGGCGGGTaGGAGTTGACAGTACAGCGC +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHKRAGG*ELTVQR
Trigger: GCGCTGTACTGTCAACTCCAACCCGCCTGCCCGCTT...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCGGAAGGTGATGGCCTaGTCTGGGATGCCGCACACG +
Preference number: 5 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDRKVMA*SGMPHT
Trigger: CGTGTGCGGCATCCCAGACAAGGCCATCACCTTCCG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGGGCAGCTCAGGATCATaGCGGGTCACCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQGSSGS*RVTSSR
Trigger: GCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGCC...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGACCACGGCCCTACCCTaGGGCACACTGATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQTTALP*GTLMVG
Trigger: GCCCACCATCAGTGTGCCCAAGGGTAGGGCCGTGGT...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTGCCCCGCACCTCGCATaGCAGCTCGGCAGGCGATCC +
Preference number: 5 (lower is better)
Translates to: AGWWSPGHPLSPTPEEASAPHLA*QLGRRS
Trigger: GGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGC...AGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAACTGGCGGCCGCGGCTaGCCCCGCACCTCGCATTGC +
Preference number: 5 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGTGGRG*PRTSHC
Trigger: GCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGT...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGACTGGCGGCCGCGGCTaGCCCCGCACCTCGCATTGC +
Preference number: 5 (lower is better)
Translates to: VSEQLRGHPRWQFRASRETGGRG*PRTSHC
Trigger: GCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGT...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGACTGGCGGCCGCGGCTaGCCCCGCACCTCGCATTGC +
Preference number: 5 (lower is better)
Translates to: QSNSEDILGGSSGLPERTTGGRG*PRTSHC
Trigger: GCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGT...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGGCCTTGACCACCGCATaGTGCTGGTTCAACTGGCGG +
Preference number: 5 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQALTTA*CWFNWR
Trigger: CCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGC...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS GCA 90 bp CACGCCGTTCTCAGCCTTGCAGTAGTAGCGGCCGCCCTGCGTGCGTaGAATACGCTCGATGCGCAGCGTCTCGTTGAACACCGATGTCTC +
Preference number: 5 (lower is better)
Translates to: HAVLSLAVVAAALRA*NTLDAQRLVEHRCL
Trigger: GAGACATCGGTGTTCAACGAGACGCTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGCCGCTACTACTGCAAGGCTGAGAACGGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 90 bp GGCCCATGGGAAGAGGAGTCATCTCCTCGCCCCCAGATCCTGCTGTaGCTGGCCACAGGTTCCCAATACTCTGCCACCCAGCAGCAGACT +
Preference number: 5 (lower is better)
Translates to: GPWEEESSPRPQILL*LATGSQYSATQQQT
Trigger: AGTCTGCTGCTGGGTGGCAGAGTATTGGGAACCTGTGGCCAGGCACAGCAGGATCTGGGGGCGAGGAGATGACTCCTCTTCCCATGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS GCA 90 bp ATCAGGGCCCATGGGAAGAGGAGTCATCTCCTCGCCCCCAGATCCTaGTGTGCCTGGCCACAGGTTCCCAATACTCTGCCACCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: IRAHGKRSHLLAPRS*CAWPQVPNTLPPSS
Trigger: GCTGCTGGGTGGCAGAGTATTGGGAACCTGTGGCCAGGCACAGCAGGATCTGGGGGCGAGGAGATGACTCCTCTTCCCATGGGCCCTGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS GCA 90 bp CGCTCGCTGATATTGTCCTCTTTCACCACACATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCTGGAGCTGCTCCACCTGTCGCCGTT +
Preference number: 5 (lower is better)
Translates to: RSLILSSFTTHAWPA*TICAWAGAAPPVAV
Trigger: AACGGCGACAGGTGGAGCAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515437.5
CDS GCA 90 bp CGCTCGCTGATATTGTCCTCTTTCACCACACATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCTGGAGCTGGCAGGAGAGGATGGAGG +
Preference number: 5 (lower is better)
Translates to: RSLILSSFTTHAWPA*TICAWAGAGRRGWR
Trigger: CCTCCATCCTCTCCTGCCAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508399.1
CDS GCA 90 bp TGGGCTGGAGCTAGCTCCTGCTGTTGTGCCGGGGACCATGCTGGATaGTGGATGCAATGCCAGGCTGGAGTGGCCATCCCTGGTCCCTAT +
Preference number: 5 (lower is better)
Translates to: WAGASSCCCAGDHAG*WMQCQAGVAIPGPY
Trigger: ATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCACAACAGCAGGAGCTAGCTCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 90 bp GTGGAGCCTACGCCTTACGCAGGCGGAGCCCAGACGTGGCTTGGATaGGTTTCGAAGGGGTCTAGGCCTGGTTTGGGTGCTGGTAGAGAG +
Preference number: 5 (lower is better)
Translates to: VEPTPYAGGAQTWLG*VSKGSRPGLGAGRE
Trigger: CTCTCTACCAGCACCCAAACCAGGCCTAGACCCCTTCGAAACCCATCCAAGCCACGTCTGGGCTCCGCCTGCGTAAGGCGTAGGCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 90 bp CTGAAAGGGGTGGAGCCTACGCCTTACGCAGGCGGAGCCCAGACGTaGCTTGGATGGGTTTCGAAGGGGTCTAGGCCTGGTTTGGGTGCT +
Preference number: 5 (lower is better)
Translates to: LKGVEPTPYAGGAQT*LGWVSKGSRPGLGA
Trigger: AGCACCCAAACCAGGCCTAGACCCCTTCGAAACCCATCCAAGCCACGTCTGGGCTCCGCCTGCGTAAGGCGTAGGCTCCACCCCTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 90 bp TCTAACGCTGGTGGAAGCGGGGCTGGAAGGGATGCTGCCTGCTGCTaGAACGGCTGGAAGCTGGGATTGGACCGAGCTGAAAGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: SNAGGSGAGRDAACC*NGWKLGLDRAERGG
Trigger: TCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTCCAGCCCCGCTTCCACCAGCGTTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 90 bp GCTGGAGCTAGCTCCTGCTGTTGTGCCGGGGACCATGCTGGATGCTaGATGCAATGCCAGGCTGGAGTGGCCATCCCTGGTCCCTATGTG +
Preference number: 5 (lower is better)
Translates to: AGASSCCCAGDHAGC*MQCQAGVAIPGPYV
Trigger: CACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCACAACAGCAGGAGCTAGCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGGCCGAGGTCCCTGGGTaGGCGGATGCCATTCAGGCA +
Preference number: 5 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGAEVPG*ADAIQA
Trigger: TGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGC...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CACAGCTCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACCCACACCAGGCTCACTaGTGCTGGGCACGAGCGGGA +
Preference number: 5 (lower is better)
Translates to: HSSHHLCNAKRKMAMGPHPHQAH*CWARAG
Trigger: TCCCGCTCGTGCCCAGCACAAGTGAGCCTGGTGTGG...GTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp CTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGTGCGGGGCAAATGGATaGGAAGGTCCTCTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: LRDQACVSRAPLFRDRTRCGANG*EGPLRE
Trigger: TTCCCTCAGAGGACCTTCCAATCCATTTGCCCCGCA...CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATACTAGCTGTGTGACCTaGGGCCACTCCCCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHTSCVT*GHSPSP
Trigger: TGGGGAAGGGGAGTGGCCCAAGGTCACACAGCTAGT...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ACTAACCTTGCACGGTCCCCCAGCTCCCGAGGCCTCGATGTCTCGATGAACATGCGGACCGGGATGGCCTaGACCACCGCATTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: TNLARSPSSRGLDVSMNMRTGMA*TTALCW
Trigger: CCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCG...CATGTTCATCGAGACATCGAGGCCTCGGGAGCTGGGGGACCGTGCAAGGTTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGAAGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCTCCACGCGGATGGACTaGATGGCCGGCACCCCCACG +
Preference number: 5 (lower is better)
Translates to: GSQMEMRGLGRVVESWSSSTRMD*MAGTPT
Trigger: CGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGA...GGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp AAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCCCGGAAGGTGATGGCCTaGTCTGGGATGCCGCACACG +
Preference number: 5 (lower is better)
Translates to: KPSSRQGCLHPLRPPAASRKVMA*SGMPHT
Trigger: CGTGTGCGGCATCCCAGACAAGGCCATCACCTTCCG...GGATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CAAGCCATCCTCAAGGCAGGGCTGTCTGCACCCACTGAGACCTCCAGCAGCATCGGTGGTGCCGTGGTGTaGGTGAGCCGGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: QAILKAGLSAPTETSSSIGGAVV*VSRKVM
Trigger: CATCACCTTCCGGCTCACCAACACCACGGCACCACC...GATGCTGCTGGAGGTCTCAGTGGGTGCAGACAGCCCTGCCTTGAGGATGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACGTCACCAGCAGCCGCTaGGACATGCGTGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHVTSSR*DMRAGL
Trigger: CAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGAC...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACACTGGCGGCCGCGGCTaGCCCCGCACCTCGCATTGC +
Preference number: 5 (lower is better)
Translates to: TGQYAHHEGGGQASHCLHTGGRG*PRTSHC
Trigger: GCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGT...GTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp GGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATACTGGCGGCCGCGGCTaGCCCCGCACCTCGCATTGC +
Preference number: 5 (lower is better)
Translates to: GWWSPGHPLSPTPEEASYTGGRG*PRTSHC
Trigger: GCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGT...ATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS TCA 90 bp GGGTCACCAGCAGCCGCTTGGACATGCGTGCCGGCTTGCCATTCTTaGACCACTGGTAGGTCACCTTCTCCTGGGGCACTGCATCCACGT +
Preference number: 5 (lower is better)
Translates to: GSPAAAWTCVPACHS*TTGRSPSPGALHPR
Trigger: ACGTGGATGCAGTGCCCCAGGAGAAGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 90 bp GTTCTTGGACAGCTTGTGGCTGAGAATGCCTCGAAGAGCTGGGGCTaGGAGGGGTTTCTGGGCACCGAAGGGCCTGCACCTCTAGGGTGC +
Preference number: 5 (lower is better)
Translates to: VLGQLVAENASKSWG*EGFLGTEGPAPLGC
Trigger: GCACCCTAGAGGTGCAGGCCCTTCGGTGCCCAGAAACCCCTCTCAGCCCCAGCTCTTCGAGGCATTCTCAGCCACAAGCTGTCCAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS GCA 90 bp AGCCCTGTCCCTGTTGACAGGACCTCCTCCCCATGCCCAGCTGGGTaGAATGTCCCATTCCTGCAGGGACACCCTCAGTGTGGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: SPVPVDRTSSPCPAG*NVPFLQGHPQCGKE
Trigger: CTCTTTCCCACACTGAGGGTGTCCCTGCAGGAATGGGACATTGCACCCAGCTGGGCATGGGGAGGAGGTCCTGTCAACAGGGACAGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 90 bp CGCTCGCTGATATTGTCCTCTTTCACCACACATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCTGGAGCTAGCTCCTGCTGTTGTGCC +
Preference number: 5 (lower is better)
Translates to: RSLILSSFTTHAWPA*TICAWAGASSCCCA
Trigger: GGCACAACAGCAGGAGCTAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 90 bp TGGTGGTGCCGTGGTGTTGGTGAGCCGGAAGGTGATGGCCTTGTCTaGGATGCCGCACACGTTACGCACAGACACCTGGCAGGTGTAGCT +
Preference number: 5 (lower is better)
Translates to: WWCRGVGEPEGDGLV*DAAHVTHRHLAGVA
Trigger: AGCTACACCTGCCAGGTGTCTGTGCGTAACGTGTGCGGCATCCCAGACAAGGCCATCACCTTCCGGCTCACCAACACCACGGCACCACCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS CCA 90 bp CATGGGAAGAGGAGTCATCTCCTCGCCCCCAGATCCTGCTGTGCCTaGCCACAGGTTCCCAATACTCTGCCACCCAGCAGCAGACTGGGA +
Preference number: 5 (lower is better)
Translates to: HGKRSHLLAPRSCCA*PQVPNTLPPSSRLG
Trigger: TCCCAGTCTGCTGCTGGGTGGCAGAGTATTGGGAACCTGTGGCCAGGCACAGCAGGATCTGGGGGCGAGGAGATGACTCCTCTTCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CCA 90 bp GTGCCGGGGACCATGCTGGATGCTGGATGCAATGCCAGGCTGGAGTaGCCATCCCTGGTCCCTATGTGCCGCCTTCACTCTCATGCTGTT +
Preference number: 5 (lower is better)
Translates to: VPGTMLDAGCNARLE*PSLVPMCRLHSHAV
Trigger: AACAGCATGAGAGTGAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 90 bp CTGTTGTGCCGGGGACCATGCTGGATGCTGGATGCAATGCCAGGCTaGAGTGGCCATCCCTGGTCCCTATGTGCCGCCTTCACTCTCATG +
Preference number: 5 (lower is better)
Translates to: LLCRGPCWMLDAMPG*SGHPWSLCAAFTLM
Trigger: CATGAGAGTGAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCACAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAGCCATCGCAGGCAGCTaGAGACTACAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKAIAGS*RLQNRA
Trigger: AGCCCTGTTCTGTAGTCTCAAGCTGCCTGCGATGGC...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGCCACACCAGGCTCACTaGTGCTGGGCACGAGCGGGA +
Preference number: 5 (lower is better)
Translates to: GHPRWQFRASRENVPRGLPHQAH*CWARAG
Trigger: TCCCGCTCGTGCCCAGCACAAGTGAGCCTGGTGTGG...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTCCAGGAGGAGGGGGCTaGGTCTTCAGGCTTCACTCA +
Preference number: 5 (lower is better)
Translates to: PRWCQASGSCCQENPRSFPGGGG*VFRLHS
Trigger: TGAGTGAAGCCTGAAGACCAAGCCCCCTCCTCCTGG...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCCGGACCGGGATGGCCTaGACCACCGCATTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: VQGFQRERSKRPELKLQGRTGMA*TTALCW
Trigger: CCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCG...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGTTGTCTCGGACCGGGATGGCCTaGACCACCGCATTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: ERLGFWVRAFCRVQSKLSRTGMA*TTALCW
Trigger: CCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCG...AGACAACTTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGGDSLT*HGPPAP
Trigger: GGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCC...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGGACGACTGACAAACTaGTCGTTTCCCCGCACTGGG +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHGRLTN*SFPRTG
Trigger: CCCAGTGCGGGGAAACGACAAGTTTGTCAGTCGTCC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CCCAGGTGGTGCCAGGCCAGTGGTTCCTGCTGTCAGGAGAACCCAAGGAGCTTTGATGTCTCCTGGAACTaGTCCGAGGCGCTACCTGCC +
Preference number: 5 (lower is better)
Translates to: PRWCQASGSCCQENPRSFDVSWN*SEALPA
Trigger: GGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATC...AAAGCTCCTTGGGTTCTCCTGACAGCAGGAACCACTGGCCTGGCACCACCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTTCCACGCGGATGGACTaGATGGCCGGCACCCCCACG +
Preference number: 5 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKASTRMD*MAGTPT
Trigger: CGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGA...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp ACACGGAGATCGGTCAGGATGTACTCCAGCAGCTGCCCCTTCTCCACACGCCGGGGTGCACCGTCAGCATaGGCTCATCCAGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: TRRSVRMYSSSCPFSTRRGAPSA*AHPGTA
Trigger: TGCAGTACCTGGATGAGCCAATGCTGACGGTGCACC...CCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTACATCCTGACCGATCTCCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAAAGCGGGCAGGCGGGTaGGAGTTGACAGTACAGCGC +
Preference number: 5 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTKRAGG*ELTVQR
Trigger: GCGCTGTACTGTCAACTCCAACCCGCCTGCCCGCTT...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAGATCGCACCAGCAGGTaGACAGTCTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKDRTSR*TVFLAG
Trigger: CCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGATC...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGGTCACCAGCAGCCGCTaGGACATGCGTGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWVTSSR*DMRAGL
Trigger: CAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGAC...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACGTCACCAGCAGCCGCTaGGACATGCGTGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: EMRGLGRVVESWSSTLTYVTSSR*DMRAGL
Trigger: CAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGAC...GTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGGGCAGCTCAGGATCATaGCGGGTCACCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWGSSGS*RVTSSR
Trigger: GCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGCC...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTGGCAGCTCAGGATCATaGCGGGTCACCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCGSSGS*RVTSSR
Trigger: GCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGCC...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGACCACGGCCCTACCCTaGGGCACACTGATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RSQSNSEDILGGSSGLPETTALP*GTLMVG
Trigger: GCCCACCATCAGTGTGCCCAAGGGTAGGGCCGTGGT...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAGCCCCGCACCTCGCATaGCAGCTCGGCAGGCGATCC +
Preference number: 5 (lower is better)
Translates to: QVSMLITRVGARLLIVYTAPHLA*QLGRRS
Trigger: GGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGC...TGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGGAGGGATGGTAGGGTaGGGTGCCGAGAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHGGMVG*GAEKGK
Trigger: TTTTCCCTTCTCGGCACCCAACCCTACCATCCCTCC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CCCATCTCAGGAGTCCCAGAGTCTGACCAAGGGAGGGGCTCCATGTCTGCCCCACGATGGGTCAGGAATTaGGACAGAGCTTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: PISGVPESDQGRGSMSAPRWVRN*DRAWPS
Trigger: GCTCGGCCAAGCTCTGTCCAAATTCCTGACCCATCG...TGGGGCAGACATGGAGCCCCTCCCTTGGTCAGACTCTGGGACTCCTGAGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CCAGCCACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGACCGCACCAGGAGGTaGAGGGAGCCTGGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: PATGKMICANGLGAPVDADRTRR*REPGEA
Trigger: GGCTTCCCCAGGCTCCCTCAACCTCCTGGTGCGGTC...TGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS GCA 90 bp GATGGTGTAGACACGCTCGCTGATATTGTCCTCTTTCACCACACATaGCTGGCCCGCATGCACGATCTGCGCCTGGGCTGGAGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: DGVDTLADIVLFHHT*LARMHDLRLGWSCS
Trigger: GGAGCAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515437.5
CDS GCA 90 bp GATGGTGTAGACACGCTCGCTGATATTGTCCTCTTTCACCACACATaGCTGGCCCGCATGCACGATCTGCGCCTGGGCTGGAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: DGVDTLADIVLFHHT*LARMHDLRLGWSWQ
Trigger: CTGCCAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACACCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508399.1
CDS CCA 90 bp ACACCCTACCCTTCCCCTCTAGGCAAGGGAGCTGTCCCAGGGCAGTaGGACCTCTGTCTGGGCACGCAGCAGGGTTTCCAAAGAAAACAG +
Preference number: 5 (lower is better)
Translates to: TPYPSPLGKGAVPGQ*DLCLGTQQGFQRKQ
Trigger: CTGTTTTCTTTGGAAACCCTGCTGCGTGCCCAGACAGAGGTCCCACTGCCCTGGGACAGCTCCCTTGCCTAGAGGGGAAGGGTAGGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CCA 90 bp GCAATACGCTCGATGCGCAGCGTCTCGTTGAACACCGATGTCTCCTaGAACTTGTCCGAGGCGCTACCTGCCGTCTTGGTCCACCGTACC +
Preference number: 5 (lower is better)
Translates to: AIRSMRSVSLNTDVS*NLSEALPAVLVHRT
Trigger: GGTACGGTGGACCAAGACGGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCATCGAGCGTATTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 90 bp TGGCAGAATGGCATCACCACCATCTCCTGGGACTATCAGGGCCCATaGGAAGAGGAGTCATCTCCTCGCCCCCAGATCCTGCTGTGCCTG +
Preference number: 5 (lower is better)
Translates to: WQNGITTISWDYQGP*EEESSPRPQILLCL
Trigger: CAGGCACAGCAGGATCTGGGGGCGAGGAGATGACTCCTCTTCCCATGGGCCCTGATAGTCCCAGGAGATGGTGGTGATGCCATTCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CCA 90 bp ACACAAACATGGGGCTGGCCTGCAGCCACCGCTGAAAGCCCTCCTTaGCAGAATGGCATCACCACCATCTCCTGGGACTATCAGGGCCCA +
Preference number: 5 (lower is better)
Translates to: TQTWGWPAATAESPP*QNGITTISWDYQGP
Trigger: TGGGCCCTGATAGTCCCAGGAGATGGTGGTGATGCCATTCTGCCAAGGAGGGCTTTCAGCGGTGGCTGCAGGCCAGCCCCATGTTTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS-3UTR CAA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: SCTPISSGALVEMAGRLDVSRAP*FRDRTR
Trigger: CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACAC...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGCCGAGGTCCCTGGGTaGGCGGATGCCATTCAGGCA +
Preference number: 5 (lower is better)
Translates to: AVQGFQRERSKRPELKLQAEVPG*ADAIQA
Trigger: TGCCTGAATGGCATCCGCCAACCCAGGGACCTCGGC...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGGCCACCCACCAGCTGTaGGTGATAATGATCACACAG +
Preference number: 5 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQATHQL*VIMITQ
Trigger: CTGTGTGATCATTATCACCAACAGCTGGTGGGTGGC...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp TGGGGGCTGAGGCTAGGAGAGAACCGTGTTCTCAGGAGTCCCACTGCTTGTAGGTCGGAGCAGCCAGGGTaGCGGGGCAAATGGATTGGA +
Preference number: 5 (lower is better)
Translates to: WGLRLGENRVLRSPTACRSEQPG*RGKWIG
Trigger: TCCAATCCATTTGCCCCGCAACCCTGGCTGCTCCGA...CCTACAAGCAGTGGGACTCCTGAGAACACGGTTCTCTCCTAGCCTCAGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGACTAGCTGTGTGACCTaGGGCCACTCCCCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGTSCVT*GHSPSP
Trigger: TGGGGAAGGGGAGTGGCCCAAGGTCACACAGCTAGT...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGACTCCCTGCAGTTGTTaGGCAGGAGACCTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGTPCSC*AGDLRG
Trigger: GCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGT...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCACGGACCGGGATGGCCTaGACCACCGCATTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: LSPTPEEASYEVQTQPRARTGMA*TTALCW
Trigger: CCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCG...TGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CAA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACCGCGTCCAGTCAAAGTaGTCTGTCAGGTCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDRVQSK*SVRSWV
Trigger: TACCCAGGACCTGACAGACAACTTTGACTGGACGCG...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AGCCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: SQMEMRGLGRVVESWSSTGDSLT*HGPPAP
Trigger: GGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCC...AGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CAA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGAGCGTAGACTCCTaGTCCCCGGCAGTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: EDILGGSSGLPERTFQEAWSVDS*SPAVEG
Trigger: CCCTTCCACTGCCGGGGACAAGGAGTCTACGCTCCA...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGTGGAGCGTAGACTCCTaGTCCCCGGCAGTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEWSVDS*SPAVEG
Trigger: CCCTTCCACTGCCGGGGACAAGGAGTCTACGCTCCA...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTGATGTCTCCTGGAACTaGTCCGAGGCGCTACCTGCC +
Preference number: 5 (lower is better)
Translates to: TWRWHCRGDSLTLHGPPADVSWN*SEALPA
Trigger: GGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATC...AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACTCCACGCGGATGGACTaGATGGCCGGCACCCCCACG +
Preference number: 5 (lower is better)
Translates to: RSKRPELKLQGIFNSACHSTRMD*MAGTPT
Trigger: CGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGA...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CACAGCTCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACGCAGGCGGGTTGGAGTaGACAGTACAGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: HSSHHLCNAKRKMAMGPHAGGLE*TVQRRN
Trigger: GTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTGC...GTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGAGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCCGGAAGGTGATGGCCTaGTCTGGGATGCCGCACACG +
Preference number: 5 (lower is better)
Translates to: VQGFQRERSKRPELKLQGRKVMA*SGMPHT
Trigger: CGTGTGCGGCATCCCAGACAAGGCCATCACCTTCCG...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCGGTGGTGCCGTGGTGTaGGTGAGCCGGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: QGFQRERSKRPELKLQGIGGAVV*VSRKVM
Trigger: CATCACCTTCCGGCTCACCAACACCACGGCACCACC...GATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGGACATGCGTGCCGGCTaGCCATTCTTGAACCACTGG +
Preference number: 5 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRDMRAG*PFLNHW
Trigger: CCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTC...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCGTCACCAGCAGCCGCTaGGACATGCGTGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: AHHEGGGQASHCLHKYTAVTSSR*DMRAGL
Trigger: CAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGAC...GGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGGCAGCAGCTGCCCTTaGAAACGCCACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEGSSCP*KRHTAE
Trigger: CTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCC...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp AGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGGCAGCAGCTGCCCTTaGAAACGCCACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: RTWRWHCRGDSLTLHGPPGSSCP*KRHTAE
Trigger: CTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCC...TGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGGACCGCACCAGGAGGTaGAGGGAGCCGATGTGTTTC +
Preference number: 5 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGDRTRR*REPMCF
Trigger: GAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTC...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS GCA 90 bp GATGGTGTAGACACGCTCGCTGATATTGTCCTCTTTCACCACACATaGCTGGCCCGCATGCACGATCTGCGCCTGGGCTGGAGCGTAGAC +
Preference number: 5 (lower is better)
Translates to: DGVDTLADIVLFHHT*LARMHDLRLGWSVD
Trigger: GTCTACGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACACCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS GCA 90 bp CAGCTCAGGATCATTGCGGGTCACCAGCAGCCGCTTGGACATGCGTaGCGGCTTGCCATTCTTGAACCACTGGTAGGTCACCTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: QLRIIAGHQQPLGHA*RLAILEPLVGHLLL
Trigger: CAGGAGAAGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGACCCGCAATGATCCTGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 90 bp TGTCTCAGAGGAGATGTTGACCTCGACGCTGAGGTCGGGCACGGGTaGCCCTGGGAAAGAAGCCATGCACAGGTAGGTGCCATAGTCACT +
Preference number: 5 (lower is better)
Translates to: CLRGDVDLDAEVGHG*PWERSHAQVGAIVT
Trigger: AGTGACTATGGCACCTACCTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTCAGCGTCGAGGTCAACATCTCCTCTGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 90 bp GCTGGAGTGGCCATCCCTGGTCCCTATGTGCCGCCTTCACTCTCATaGTGTTTCTTCTGCTTCGCGGGTACAGAAAGACTGCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: AGVAIPGPYVPPSLS*CFFCFAGTERLLGR
Trigger: CCTCCCCAGCAGTCTTTCTGTACCCGCGAAGCAGAAGAAACAGCATGAGAGTGAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS GCA 90 bp GCTGGATGCAATGCCAGGCTGGAGTGGCCATCCCTGGTCCCTATGTaGCGCCTTCACTCTCATGCTGTTTCTTCTGCTTCGCGGGTACAG +
Preference number: 5 (lower is better)
Translates to: AGCNARLEWPSLVPM*RLHSHAVSSASRVQ
Trigger: CTGTACCCGCGAAGCAGAAGAAACAGCATGAGAGTGAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 90 bp GAGGCTTCCCATCGCTGTCCTTCTCCTGGCCTTCCACACCTGATCTaGGCGCTGTCAGCTTCTCTGATCTCATTTGCTGCCACTCGGGTC +
Preference number: 5 (lower is better)
Translates to: EASHRCPSPGLPHLI*ALSASLISFAATRV
Trigger: GACCCGAGTGGCAGCAAATGAGATCAGAGAAGCTGACAGCGCCCAGATCAGGTGTGGAAGGCCAGGAGAAGGACAGCGATGGGAAGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CCA 90 bp AGAGGAGATGTTGACCTCGACGCTGAGGTCGGGCACGGGTGCCCCTaGGAAAGAAGCCATGCACAGGTAGGTGCCATAGTCACTGAAGTG +
Preference number: 5 (lower is better)
Translates to: RGDVDLDAEVGHGCP*ERSHAQVGAIVTEV
Trigger: CACTTCAGTGACTATGGCACCTACCTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTCAGCGTCGAGGTCAACATCTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: RSKRPELKLQGIFNSACHVSRAP*FRDRTR
Trigger: CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACAC...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGGTTCTCTGCTCATCCTaGCAGCCAATGCAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVVLCSS*QPMQAP
Trigger: GGGGGCCTGCATTGGCTGCAAGGATGAGCAGAGAAC...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGGACAAGGCCTATGTaGCGCCGAGGTCCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GHPRWQFRASRENVPRGLRTRPM*RRGPWV
Trigger: AACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCT...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TCTCATCATCTCTGCAACGCCAAGAGGAAGATGGCCATGGGCCCCCACAGCTGTGGTGCCCTACCTTCCTaGTCTCCTGGACGTGGGACA +
Preference number: 5 (lower is better)
Translates to: SHHLCNAKRKMAMGPHSCGALPS*SPGRGT
Trigger: TGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACC...ACAGCTGTGGGGGCCCATGGCCATCTTCCTCTTGGCGTTGCAGAGATGATGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp CCAGTGTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGGTGCTTTTTGGCATTTaGCCCTGTACACACCCTCCT +
Preference number: 5 (lower is better)
Translates to: PVLGERLGFWVRAFCRVQVLFGI*PCTHPP
Trigger: AGGAGGGTGTGTACAGGGCAAAATGCCAAAAAGCAC...CTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAACACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp TGGAGGACTCCGCTGAACCCTGAACCCAACCTCAGCCAGTGGCTCTGCAGGGACGCCACCCACCAGCTGTaGGTGATAATGATCACACAG +
Preference number: 5 (lower is better)
Translates to: WRTPLNPEPNLSQWLCRDATHQL*VIMITQ
Trigger: CTGTGTGATCATTATCACCAACAGCTGGTGGGTGGC...GTCCCTGCAGAGCCACTGGCTGAGGTTGGGTTCAGGGTTCAGCGGAGTCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGTCGGAGCAGCCAGGGTaGCGGGGCAAATGGATTGGA +
Preference number: 5 (lower is better)
Translates to: GHPRWQFRASRENVPRGLSEQPG*RGKWIG
Trigger: TCCAATCCATTTGCCCCGCAACCCTGGCTGCTCCGA...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACCGGACCGGGATGGCCTaGACCACCGCATTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: TGQYAHHEGGGQASHCLHRTGMA*TTALCW
Trigger: CCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCG...GTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCGGACCGGGATGGCCTaGACCACCGCATTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: SEQLRGHPRWQFRASRENRTGMA*TTALCW
Trigger: CCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CCAAATGGAAATGAGAGGACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PNGNERTRQGGGVLVIHSVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...AGAGTGGATGACCAGGACTCCACCACCCTGCCGAGTCCTCTCATTTCCATTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CAA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGATGGAGCGTAGACTCCTaGTCCCCGGCAGTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGWSVDS*SPAVEG
Trigger: CCCTTCCACTGCCGGGGACAAGGAGTCTACGCTCCA...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGGCGCTACCTGCCGTCTaGGTCCACCGTACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQALPAV*VHRTWG
Trigger: ACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCGC...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGGCGCTACCTGCCGTCTaGGTCCACCGTACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: SSRGWGPGFSLFTQVHSLALPAV*VHRTWG
Trigger: ACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCGC...CAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGATGTCTCCTGGAACTaGTCCGAGGCGCTACCTGCC +
Preference number: 5 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEDVSWN*SEALPA
Trigger: GGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATC...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp ACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGATGCGCAGCGTCTCGTaGAACACCGATGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TRQGGGVLVIHSHLPQKKMRSVS*NTDVSW
Trigger: CCAGGAGACATCGGTGTTCAACGAGACGCTGCGCAT...CTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTTCCACGCGGATGGACTaGATGGCCGGCACCCCCACG +
Preference number: 5 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCSTRMD*MAGTPT
Trigger: CGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGA...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTTCCACGCGGATGGACTaGATGGCCGGCACCCCCACG +
Preference number: 5 (lower is better)
Translates to: VSMLITRVGARLLIVYTSSTRMD*MAGTPT
Trigger: CGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGA...ACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp GAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCGCAGGCGGGTTGGAGTaGACAGTACAGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: EDILGGSSGLPERTFQEAAGGLE*TVQRRN
Trigger: GTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTGC...GGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GATACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCAGCAGGCGGGTTGGAGTaGACAGTACAGCGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: DTVNRSVCSSRGWGPGFSAGGLE*TVQRRN
Trigger: GTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTGC...TGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGAAGCGGGCAGGCGGGTaGGAGTTGACAGTACAGCGC +
Preference number: 5 (lower is better)
Translates to: QSNSEDILGGSSGLPERTKRAGG*ELTVQR
Trigger: GCGCTGTACTGTCAACTCCAACCCGCCTGCCCGCTT...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GTGTGCAGCAGGTGCCCTACCTTCCTTGTCTCCTGGACGTGGGACAGTCACAGAGACATGCGTGCCGGCTaGCCATTCTTGAACCACTGG +
Preference number: 5 (lower is better)
Translates to: VCSRCPTFLVSWTWDSHRDMRAG*PFLNHW
Trigger: CCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTC...TCTGTGACTGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACCTGCTGCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGGCAGCTCAGGATCATaGCGGGTCACCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LITRVGARLLIVYTSTQPGSSGS*RVTSSR
Trigger: GCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGCC...AGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACAGCAGTGCAGCCTCCTaGTCCACGCGGGACCAGAGC +
Preference number: 5 (lower is better)
Translates to: SEQLRGHPRWQFRASRENSSAAS*STRDQS
Trigger: GCTCTGGTCCCGCGTGGACAAGGAGGCTGCACTGCT...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGGACCGCACCAGGAGGTaGAGGGAGCCGATGTGTTTC +
Preference number: 5 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEDRTRR*REPMCF
Trigger: GAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTC...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTTGTTCCGGGACCGCACCAGGATGACATCCACACCCTaGATTTGGGGTCACTTTGCA +
Preference number: 5 (lower is better)
Translates to: LRDQACVSRAPLFRDRTRMTSTP*IWGHFA
Trigger: TGCAAAGTGACCCCAAATCAAGGGTGTGGATGTCAT...CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: QYAHHEGGGQASHCLHKYVSRAP*FRDRTR
Trigger: CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACAC...GTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp GAGTGGGGAAGTTATCAGTCTTCAGACTGCCCAGGCCCAAGACCCTGTGCTGGGCACACATTGCCCTTATaGCCACTGAGAGACCAGGCG +
Preference number: 5 (lower is better)
Translates to: EWGSYQSSDCPGPRPCAGHTLPL*PLRDQA
Trigger: CGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTG...CCCAGCACAGGGTCTTGGGCCTGGGCAGTCTGAAGACTGATAACTTCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACCACACATTGCCCTTATaGCCACTGAGAGACCAGGCG +
Preference number: 5 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHHTLPL*PLRDQA
Trigger: CGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTG...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAGCCTGCTGCCACACATaGCCCTTATTGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTACCHT*PLLPLR
Trigger: TCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGC...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGGTGCCCTACCTTCCTaGTCTCCTGGACGTGGGACA +
Preference number: 5 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRGALPS*SPGRGT
Trigger: TGTCCCACGTCCAGGAGACAAGGAAGGTAGGGCACC...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGACCAGGAGGAGGGGGCTaGGTCTTCAGGCTTCACTCA +
Preference number: 5 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRPGGGG*VFRLHS
Trigger: TGAGTGAAGCCTGAAGACCAAGCCCCCTCCTCCTGG...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACCTTGCACGGTCCCCCAGCTCGCGTCCAGTCAAAGTaGTCTGTCAGGTCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: TWRWHCRGDSLTLHGPPARVQSK*SVRSWV
Trigger: TACCCAGGACCTGACAGACAACTTTGACTGGACGCG...AGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCCTCTACAATGCCAGCGCCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCGCGTCCAGTCAAAGTaGTCTGTCAGGTCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: RQGGGVLVIHSHLPQKKLRVQSK*SVRSWV
Trigger: TACCCAGGACCTGACAGACAACTTTGACTGGACGCG...AAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CAA 90 bp GTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: VSMLITRVGARLLIVYTSGDSLT*HGPPAP
Trigger: GGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCC...ACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: FQRERSKRPELKLQGIFNGDSLT*HGPPAP
Trigger: GGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCC...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTTGGAGCGTAGACTCCTaGTCCCCGGCAGTGGAAGGG +
Preference number: 5 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFWSVDS*SPAVEG
Trigger: CCCTTCCACTGCCGGGGACAAGGAGTCTACGCTCCA...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACGCGCTACCTGCCGTCTaGGTCCACCGTACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: CGRRRRHSRTWRWHCRGDALPAV*VHRTWG
Trigger: ACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCGC...GTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATGCGCAGCGTCTCGTaGAACACCGATGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VQGFQRERSKRPELKLQGMRSVS*NTDVSW
Trigger: CCAGGAGACATCGGTGTTCAACGAGACGCTGCGCAT...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GTGTGTGAGCATGAGTGTGTGCGTGTGTGCAAGTGGAACAGCTGTCTCCAGGGCGGTGCACCGTCAGCATaGGCTCATCCAGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: VCEHECVRVCKWNSCLQGGAPSA*AHPGTA
Trigger: TGCAGTACCTGGATGAGCCAATGCTGACGGTGCACC...GCCCTGGAGACAGCTGTTCCACTTGCACACACGCACACACTCATGCTCACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCAAGCGGGCAGGCGGGTaGGAGTTGACAGTACAGCGC +
Preference number: 5 (lower is better)
Translates to: CSSRGWGPGFSLFTQVHSKRAGG*ELTVQR
Trigger: GCGCTGTACTGTCAACTCCAACCCGCCTGCCCGCTT...GCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAGGTGGTGCCGTGGTGTaGGTGAGCCGGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLGGAVV*VSRKVM
Trigger: CATCACCTTCCGGCTCACCAACACCACGGCACCACC...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGCAGGGTTGCCCACATaGTTGGTGGCTGTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GHPRWQFRASRENVPRGLAGLPT*LVAVQL
Trigger: CAACTGCACAGCCACCAACAATGTGGGCAACCCTGC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp ACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGGACATGCGTGCCGGCTaGCCATTCTTGAACCACTGG +
Preference number: 5 (lower is better)
Translates to: TVNRSVCSSRGWGPGFSLDMRAG*PFLNHW
Trigger: CCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTC...CAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp AGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAAGCAGTGCAGCCTCCTaGTCCACGCGGGACCAGAGC +
Preference number: 5 (lower is better)
Translates to: RSVCSSRGWGPGFSLFTQSSAAS*STRDQS
Trigger: GCTCTGGTCCCGCGTGGACAAGGAGGCTGCACTGCT...TTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACAGCAGTGCAGCCTCCTaGTCCACGCGGGACCAGAGC +
Preference number: 5 (lower is better)
Translates to: FQRERSKRPELKLQGIFNSSAAS*STRDQS
Trigger: GCTCTGGTCCCGCGTGGACAAGGAGGCTGCACTGCT...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAGGCAGCAGCTGCCCTTaGAAACGCCACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLGSSCP*KRHTAE
Trigger: CTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCC...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGCCTTGACCACCGCATaGTGCTGGTTCAACTGGCGG +
Preference number: 5 (lower is better)
Translates to: QSNSEDILGGSSGLPERTALTTA*CWFNWR
Trigger: CCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGCCTTGACCACCGCATaGTGCTGGTTCAACTGGCGG +
Preference number: 5 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAALTTA*CWFNWR
Trigger: CCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGC...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATTCAAAGTGGCAGGTGTaGTCTGAAAGGTTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHSKWQV*SERFGE
Trigger: CTCTCCGAACCTTTCAGACAACACCTGCCACTTTGA...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGACCGCACCAGGAGGTaGAGGGAGCCGATGTGTTTC +
Preference number: 5 (lower is better)
Translates to: QSNSEDILGGSSGLPERTDRTRR*REPMCF
Trigger: GAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS TCA 90 bp GGACCCCTGTCTCCAATCATGTTACCCCCTCTGCTCAGTCTCCTTTaGGGCTTCCCATCGCTGTCCTTCTCCTGGCCTTCCACACCTGAT +
Preference number: 5 (lower is better)
Translates to: GPLSPIMLPPLLSLL*GFPSLSFSWPSTPD
Trigger: ATCAGGTGTGGAAGGCCAGGAGAAGGACAGCGATGGGAAGCCTCAAAGGAGACTGAGCAGAGGGGGTAACATGATTGGAGACAGGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 90 bp TGGGCTGGAGCTGCTCCACCTGTCGCCGTTATTTATCTCAGCGTGTaGGCAAGAATTGTTTTAGGTCGGCCCGTGGGAGCGCAGACAATC +
Preference number: 5 (lower is better)
Translates to: WAGAAPPVAVIYLSV*ARIVLGRPVGAQTI
Trigger: GATTGTCTGCGCTCCCACGGGCCGACCTAAAACAATTCTTGCGCACACGCTGAGATAAATAACGGCGACAGGTGGAGCAGCTCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515437.5
CDS CCA 90 bp TTCTCCTGGGGCACTGCATCCACGTGGCACGATAGCTTCAGGTCCTaGCCCAGCTGGATGTTCTCACTCTCTTTGATCACGTCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: FSWGTASTWHDSFRS*PSWMFSLSLITSGV
Trigger: CACTCCTGACGTGATCAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATCGTGCCACGTGGATGCAGTGCCCCAGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 90 bp CCATGCTGGATGCTGGATGCAATGCCAGGCTGGAGTGGCCATCCCTaGTCCCTATGTGCCGCCTTCACTCTCATGCTGTTTCTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: PCWMLDAMPGWSGHP*SLCAAFTLMLFLLL
Trigger: AAGCAGAAGAAACAGCATGAGAGTGAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp GTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCGCCTGCTGCCACACATaGCCCTTATTGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: VQGFQRERSKRPELKLQGACCHT*PLLPLR
Trigger: TCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGC...GCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGCCTGCTGCCACACATaGCCCTTATTGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: GHPRWQFRASRENVPRGLACCHT*PLLPLR
Trigger: TCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp TCTAGGGCAGGAAGAATGCATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGGCCTGCTGCCACACATaGCCCTTATTGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: SRAGRMHGDLEGHQSWAEACCHT*PLLPLR
Trigger: TCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGC...CTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATGCATTCTTCCTGCCCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCGCCTGGCCTCTGTCCTaGTTCTCTGCTCATCCTTGC +
Preference number: 5 (lower is better)
Translates to: RGHPRWQFRASRENVPRGAWPLS*FSAHPC
Trigger: GCAAGGATGAGCAGAGAACAAGGACAGAGGCCAGGC...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAAGGACAAGGCCTATGTaGCGCCGAGGTCCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLRTRPM*RRGPWV
Trigger: AACCCAGGGACCTCGGCGCAACATAGGCCTTGTCCT...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGCACACAGACCTGTGTTaGCACACACTCCTGCCCAAC +
Preference number: 5 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEHTDLC*HTLLPN
Trigger: GTTGGGCAGGAGTGTGTGCAAACACAGGTCTGTGTG...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGCTTTTCAACATTTCTaGATGTCCGACTGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHAFQHF*MSDCAP
Trigger: TGGAGCGCAGTCGGACATCAAGAAATGTTGAAAAGC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGTGCGGGGCAAATGGATaGGAAGGTCCTCTGAGGGAA +
Preference number: 5 (lower is better)
Translates to: RSQSNSEDILGGSSGLPECGANG*EGPLRE
Trigger: TTCCCTCAGAGGACCTTCCAATCCATTTGCCCCGCA...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGCCAAACTCCCTGCAGTaGTTTGGCAGGAGACCTCAG +
Preference number: 5 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWPNSLQ*FGRRPQ
Trigger: CTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTTGG...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: MLITRVGARLLIVYTSTQVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...CTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: CGRRRRHSRTWRWHCRGDVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...GTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAACACGCTCGCTGATATaGTCCTCTTTCACCACACAT +
Preference number: 5 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKTRSLI*SSFTTH
Trigger: ATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGT...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTGCGCTACCTGCCGTCTaGGTCCACCGTACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: TGKMICANGLGAPVDAESALPAV*VHRTWG
Trigger: ACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCGC...AGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGGTGCACCGTCAGCATaGGCTCATCCAGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: SCTPISSGALVEMAGRLDGAPSA*AHPGTA
Trigger: TGCAGTACCTGGATGAGCCAATGCTGACGGTGCACC...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp AGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGCAGGGTTGCCCACATaGTTGGTGGCTGTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: SCTPISSGALVEMAGRLDAGLPT*LVAVQL
Trigger: CAACTGCACAGCCACCAACAATGTGGGCAACCCTGC...GTCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAGATCGCACCAGCAGGTaGACAGTCTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGDRTSR*TVFLAG
Trigger: CCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGATC...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGACATGCGTGCCGGCTaGCCATTCTTGAACCACTGG +
Preference number: 5 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRDMRAG*PFLNHW
Trigger: CCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTC...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATGTCACCAGCAGCCGCTaGGACATGCGTGCCGGCTTG +
Preference number: 5 (lower is better)
Translates to: VSRTCGRRRRHSRTWRWHVTSSR*DMRAGL
Trigger: CAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGAC...ATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp CTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATGATGGCAGCTCAGGATCATaGCGGGTCACCAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LPQKKLLMKSRPSHGQNDGSSGS*RVTSSR
Trigger: GCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGCC...ATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp TCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTAACCACGGCCCTACCCTaGGGCACACTGATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SVCSSRGWGPGFSLFTQVTTALP*GTLMVG
Trigger: GCCCACCATCAGTGTGCCCAAGGGTAGGGCCGTGGT...TACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGCCTTGACCACCGCATaGTGCTGGTTCAACTGGCGG +
Preference number: 5 (lower is better)
Translates to: QLRGHPRWQFRASRENVPALTTA*CWFNWR
Trigger: CCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CCCCAGCTGGCGGGGGTCAGTCTTTGGTACAATGTGGACACTTTGGTGTGCCGGTCAAAGTGGCAGGTGTaGTCTGAAAGGTTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: PQLAGVSLWYNVDTLVCRSKWQV*SERFGE
Trigger: CTCTCCGAACCTTTCAGACAACACCTGCCACTTTGA...CCGGCACACCAAAGTGTCCACATTGTACCAAAGACTGACCCCCGCCAGCTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTGACCGCACCAGGAGGTaGAGGGAGCCGATGTGTTTC +
Preference number: 5 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFDRTRR*REPMCF
Trigger: GAAACACATCGGCTCCCTCAACCTCCTGGTGCGGTC...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAATGAGAGGCCAGAATTaGGAGCCGAGGGCAGGATCC +
Preference number: 5 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRMRGQN*EPRAGS
Trigger: GGATCCTGCCCTCGGCTCCAAATTCTGGCCTCTCAT...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GATACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCACGTCTTGCACCTTTATaGGGATCCGTCTGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: DTVNRSVCSSRGWGPGFSRLAPL*GSVCFR
Trigger: CCGGAAGCAGACGGATCCCAATAAAGGTGCAAGACG...TGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS CCA 90 bp CTGGGTCTGAGGTTGCCCTTGTGCACACTGGCAAGTACCAGGCCTTaGTTTCTCCAGTCTGGGAAACGGAGGGGTAAGAAGGGAACTTAC +
Preference number: 5 (lower is better)
Translates to: LGLRLPLCTLASTRP*FLQSGKRRGKKGTY
Trigger: GTAAGTTCCCTTCTTACCCCTCCGTTTCCCAGACTGGAGAAACCAAGGCCTGGTACTTGCCAGTGTGCACAAGGGCAACCTCAGACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS-3UTR CAA 90 bp TACCGTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTCACACATTGCCCTTATaGCCACTGAGAGACCAGGCG +
Preference number: 5 (lower is better)
Translates to: YREQVSMLITRVGARLLIHTLPL*PLRDQA
Trigger: CGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTG...AATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCACGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp AGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTCACACATTGCCCTTATaGCCACTGAGAGACCAGGCG +
Preference number: 5 (lower is better)
Translates to: RQLHSHIFWCFGGDGWKAHTLPL*PLRDQA
Trigger: CGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTG...AGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp AGTCCAGACCCAGCCACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCACACACATTGCCCTTATaGCCACTGAGAGACCAGGCG +
Preference number: 5 (lower is better)
Translates to: SPDPATGKMICANGLGAPHTLPL*PLRDQA
Trigger: CGCCTGGTCTCTCAGTGGCAATAAGGGCAATGTGTG...TGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CAA 90 bp GCTGAGACTTCCATAAGCTGCTATACAGCACCTGGCCCCCGGAGTCCTTTTCACTACAATGTGGACACTTaGGTGTGCCGGGGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: AETSISCYTAPGPRSPFHYNVDT*VCRGQG
Trigger: ACCTTGCCCCCGGCACACCAAAGTGTCCACATTGTA...GTGAAAAGGACTCCGGGGGCCAGGTGCTGTATAGCAGCTTATGGAAGTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGACGCGTCCAGTCAAAGTaGTCTGTCAGGTCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGRVQSK*SVRSWV
Trigger: TACCCAGGACCTGACAGACAACTTTGACTGGACGCG...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GTTTCCCGTACATGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: VSRTCGRRRRHSRTWRWHVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...ATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACATGTACGGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000502298.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACGATGTCTCCTGGAACTaGTCCGAGGCGCTACCTGCC +
Preference number: 5 (lower is better)
Translates to: VCSSRGWGPGFSLFTQVHDVSWN*SEALPA
Trigger: GGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATC...GTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp ACCCGACAGACGCGATGGAAGTGTATGCTGAGAACCTGGAGCGACTCATTTCAGATGCGCAGCGTCTCGTaGAACACCGATGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TRQTRWKCMLRTWSDSFQMRSVS*NTDVSW
Trigger: CCAGGAGACATCGGTGTTCAACGAGACGCTGCGCAT...CTGAAATGAGTCGCTCCAGGTTCTCAGCATACACTTCCATCGCGTCTGTCGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGGTGCACCGTCAGCATaGGCTCATCCAGGTACTGCA +
Preference number: 5 (lower is better)
Translates to: LITRVGARLLIVYTSTQPGAPSA*AHPGTA
Trigger: TGCAGTACCTGGATGAGCCAATGCTGACGGTGCACC...AGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACGGAAGGTGATGGCCTaGTCTGGGATGCCGCACACG +
Preference number: 5 (lower is better)
Translates to: SMLITRVGARLLIVYTSTRKVMA*SGMPHT
Trigger: CGTGTGCGGCATCCCAGACAAGGCCATCACCTTCCG...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGGTGGTGCCGTGGTGTaGGTGAGCCGGAAGGTGATG +
Preference number: 5 (lower is better)
Translates to: YAHHEGGGQASHCLHKYTGGAVV*VSRKVM
Trigger: CATCACCTTCCGGCTCACCAACACCACGGCACCACC...TGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp GGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGGCAGGGTTGCCCACATaGTTGGTGGCTGTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: GQYAHHEGGGQASHCLHKAGLPT*LVAVQL
Trigger: CAACTGCACAGCCACCAACAATGTGGGCAACCCTGC...CTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp CGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACTCAGCATGTCACGCAGGGTTGCCCACATaGTTGGTGGCTGTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RSKRPELKLQGIFNSACHAGLPT*LVAVQL
Trigger: CAACTGCACAGCCACCAACAATGTGGGCAACCCTGC...GTGACATGCTGAGTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ACGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGTCTTCTTGGCAGGGTaGCCCACATTGTTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: TVSEQLRGHPRWQFRASRVFLAG*PTLLVA
Trigger: AGCCACCAACAATGTGGGCAACCCTGCCAAGAAGAC...TCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGGTTGACAGTCTTCTaGGCAGGGTTGCCCACATTG +
Preference number: 5 (lower is better)
Translates to: RSQSNSEDILGGSSGLPERLTVF*AGLPTL
Trigger: CAATGTGGGCAACCCTGCCAAGAAGACTGTCAACCT...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp ATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGAGGATCGCACCAGCAGGTaGACAGTCTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: ITRVGARLLIVYTSTQPEDRTSR*TVFLAG
Trigger: CCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGATC...CTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAGATCGCACCAGCAGGTaGACAGTCTTCTTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QLRGHPRWQFRASRENVPDRTSR*TVFLAG
Trigger: CCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGATC...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATATGTTCTCACTCTCTTaGATCACGTCAGGAGTGATC +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHMFSLS*ITSGVI
Trigger: GATCACTCCTGACGTGATCAAAGAGAGTGAGAACAT...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACAGGCAGCAGCTGCCCTTaGAAACGCCACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: SMLITRVGARLLIVYTSTGSSCP*KRHTAE
Trigger: CTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCC...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp ACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTGGCAGCAGCTGCCCTTaGAAACGCCACACAGCCGAG +
Preference number: 5 (lower is better)
Translates to: TGKMICANGLGAPVDAESGSSCP*KRHTAE
Trigger: CTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCC...AGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp AACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACAGCCTTGACCACCGCATaGTGCTGGTTCAACTGGCGG +
Preference number: 5 (lower is better)
Translates to: NRSVCSSRGWGPGFSLFTALTTA*CWFNWR
Trigger: CCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGC...TGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGGGCCCTGTTGGCCTTaGCATATTCTGTTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: QSNSEDILGGSSGLPERTGPCWP*HILFPL
Trigger: CAGAGGGAACAGAATATGCAAAGGCCAACAGGGCCC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGCCTTACTCCCCTTCCTaGAGCCTTCTAAGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQPYSPS*SLLSFW
Trigger: CCAAAAACTTAGAAGGCTCAAGGAAGGGGAGTAAGG...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TGGGATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGATCCACACCCTTGATTaGGGGTCACTTTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: WDGQPEPLQHDGLRATQRIHTLD*GSLCKC
Trigger: GCATTTGCAAAGTGACCCCAAATCAAGGGTGTGGAT...CCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGATCTGTGCAAATGGTTaGGGAGCCCCAGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWICANG*GAPVDA
Trigger: TGCATCCACTGGGGCTCCCAAACCATTTGCACAGAT...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS TCA 90 bp GTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGAGTaGGTGTGGGGCACACCTTCACACAGTCAGAGCCACATGATTCCC +
Preference number: 5 (lower is better)
Translates to: VGARLLIVYTSTQPE*VWGTPSHSQSHMIP
Trigger: GGGAATCATGTGGCTCTGACTGTGTGAAGGTGTGCCCCACACTCACTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS TCA 90 bp GAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTaGGTGAGTGTGGGGCACACCTTCACACAGTCAGAGCCACATGAT +
Preference number: 5 (lower is better)
Translates to: EGGGQASHCLHKYTA*VSVGHTFTQSEPHD
Trigger: ATCATGTGGCTCTGACTGTGTGAAGGTGTGCCCCACACTCACTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS CCA 90 bp GGCACTGCATCCACGTGGCACGATAGCTTCAGGTCCTGGCCCAGCTaGATGTTCTCACTCTCTTTGATCACGTCAGGAGTGATCTGGAAT +
Preference number: 5 (lower is better)
Translates to: GTASTWHDSFRSWPS*MFSLSLITSGVIWN
Trigger: ATTCCAGATCACTCCTGACGTGATCAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATCGTGCCACGTGGATGCAGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGG +
Preference number: 5 (lower is better)
Translates to: ESSIPLHSCSSVQLDPSPVSRAP*FRDRTR
Trigger: CCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACAC...GGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CAA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCATCACCACCACTTTATaGGGATCCGTCTGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: RGHPRWQFRASRENVPRGITTTL*GSVCFR
Trigger: CCGGAAGCAGACGGATCCCAATAAAGTGGTGGTGAT...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAATCACCACCACTTTATaGGGATCCGTCTGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGITTTL*GSVCFR
Trigger: CCGGAAGCAGACGGATCCCAATAAAGTGGTGGTGAT...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGGCGGGGGTCAGTCTTaGGTACAATGTGGACACTTT +
Preference number: 5 (lower is better)
Translates to: QSNSEDILGGSSGLPERTGGGQS*VQCGHF
Trigger: AAAGTGTCCACATTGTACCAAAGACTGACCCCCGCC...CGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ATTTTGCCCTGTACACACCCTCCTATCCAGGGCACCCTTTCATGCCAAGTAGATGTTCTCTGCTCATCCTaGCAGCCAATGCAGGCCCCC +
Preference number: 5 (lower is better)
Translates to: ILPCTHPPIQGTLSCQVDVLCSS*QPMQAP
Trigger: GGGGGCCTGCATTGGCTGCAAGGATGAGCAGAGAAC...ATCTACTTGGCATGAAAGGGTGCCCTGGATAGGAGGGTGTGTACAGGGCAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCACACACAGACCTGTGTTaGCACACACTCCTGCCCAAC +
Preference number: 5 (lower is better)
Translates to: QLRGHPRWQFRASRENVPHTDLC*HTLLPN
Trigger: GTTGGGCAGGAGTGTGTGCAAACACAGGTCTGTGTG...TGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACGCCATCGCAGGCAGCTaGAGACTACAGAACAGGGCT +
Preference number: 5 (lower is better)
Translates to: CGRRRRHSRTWRWHCRGDAIAGS*RLQNRA
Trigger: AGCCCTGTTCTGTAGTCTCAAGCTGCCTGCGATGGC...GTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp AGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTAACTCCCTGCAGTTGTTaGGCAGGAGACCTCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RRRRHSRTWRWHCRGDSLTPCSC*AGDLRG
Trigger: GCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGT...TAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCGCGTCCAGTCAAAGTaGTCTGTCAGGTCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: SEQLRGHPRWQFRASRENRVQSK*SVRSWV
Trigger: TACCCAGGACCTGACAGACAACTTTGACTGGACGCG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000680397.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGCGCGTCCAGTCAAAGTaGTCTGTCAGGTCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: GQYAHHEGGGQASHCLHKRVQSK*SVRSWV
Trigger: TACCCAGGACCTGACAGACAACTTTGACTGGACGCG...CTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp CCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTGGGGACTCACTAACCTaGCACGGTCCCCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: PSGCRIFYPTPFLFISSAGDSLT*HGPPAP
Trigger: GGGAGCTGGGGGACCGTGCAAGGTTAGTGAGTCCCC...AGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CAA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACATGCGCAGCGTCTCGTaGAACACCGATGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: FQRERSKRPELKLQGIFNMRSVS*NTDVSW
Trigger: CCAGGAGACATCGGTGTTCAACGAGACGCTGCGCAT...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp AACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACAATGCGCAGCGTCTCGTaGAACACCGATGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: NRSVCSSRGWGPGFSLFTMRSVS*NTDVSW
Trigger: CCAGGAGACATCGGTGTTCAACGAGACGCTGCGCAT...TGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTCTTCTTGGCAGGGTaGCCCACATTGTTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: SEQLRGHPRWQFRASRENVFLAG*PTLLVA
Trigger: AGCCACCAACAATGTGGGCAACCCTGCCAAGAAGAC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACGTCTTCTTGGCAGGGTaGCCCACATTGTTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: EQVSMLITRVGARLLIVYVFLAG*PTLLVA
Trigger: AGCCACCAACAATGTGGGCAACCCTGCCAAGAAGAC...GTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp GCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAAGGTTGACAGTCTTCTaGGCAGGGTTGCCCACATTG +
Preference number: 5 (lower is better)
Translates to: AVQGFQRERSKRPELKLQRLTVF*AGLPTL
Trigger: CAATGTGGGCAACCCTGCCAAGAAGACTGTCAACCT...TTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp GCCAGTGGCTCTGCAGGGACTCTCCAGAGCAAAGACCCTGGGAATACTCCCCAGATGTTCTCACTCTCTTaGATCACGTCAGGAGTGATC +
Preference number: 5 (lower is better)
Translates to: ASGSAGTLQSKDPGNTPQMFSLS*ITSGVI
Trigger: GATCACTCCTGACGTGATCAAAGAGAGTGAGAACAT...CTGGGGAGTATTCCCAGGGTCTTTGCTCTGGAGAGTCCCTGCAGAGCCACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ATGAAGTCCAGACCCAGCCACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCGACATGCGTGCCGGCTaGCCATTCTTGAACCACTGG +
Preference number: 5 (lower is better)
Translates to: MKSRPSHGQNDLCKWFGSDMRAG*PFLNHW
Trigger: CCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTC...GCTCCCAAACCATTTGCACAGATCATTTTGCCCGTGGCTGGGTCTGGACTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp TGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTTCATCAGGCCTTGACCACCGCATaGTGCTGGTTCAACTGGCGG +
Preference number: 5 (lower is better)
Translates to: WEPQWMQNLLSHSILVHQALTTA*CWFNWR
Trigger: CCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGC...CTGATGAACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CAA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACATGAGAGGCCAGAATTaGGAGCCGAGGGCAGGATCC +
Preference number: 5 (lower is better)
Translates to: FQRERSKRPELKLQGIFNMRGQN*EPRAGS
Trigger: GGATCCTGCCCTCGGCTCCAAATTCTGGCCTCTCAT...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGGGCCCTGTTGGCCTTaGCATATTCTGTTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SEQLRGHPRWQFRASRENGPCWP*HILFPL
Trigger: CAGAGGGAACAGAATATGCAAAGGCCAACAGGGCCC...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCGAGCCTTCTAAGTTTTaGGGCCCTGTTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: RGHPRWQFRASRENVPRGEPSKF*GPVGLC
Trigger: GCAAAGGCCAACAGGGCCCAAAAACTTAGAAGGCTC...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAGAGCCTTCTAAGTTTTaGGGCCCTGTTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGEPSKF*GPVGLC
Trigger: GCAAAGGCCAACAGGGCCCAAAAACTTAGAAGGCTC...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACAGCAGGATCCCTTTATaGGGATCCGTCTGCTTCCGG +
Preference number: 5 (lower is better)
Translates to: SEQLRGHPRWQFRASRENSRIPL*GSVCFR
Trigger: CCGGAAGCAGACGGATCCCAATAAAGGGATCCTGCT...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650466.1
CDS GCA 90 bp TGTTGGGTCCAGAAGGCCAGAGAGGACAGTCTGTGTGACTGTCCGTaGTCTGCATTCCCCATGGGGTGGAATAAACACCAGCAAGTGAAA +
Preference number: 5 (lower is better)
Translates to: CWVQKAREDSLCDCP*SAFPMGWNKHQQVK
Trigger: TTTCACTTGCTGGTGTTTATTCCACCCCATGGGGAATGCAGAGCACGGACAGTCACACAGACTGTCCTCTCTGGCCTTCTGGACCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CCA 90 bp CCCAGCTGGATGTTCTCACTCTCTTTGATCACGTCAGGAGTGATCTaGAATGTAGCGTTCTTCATGGACTGCACGTCCACGCGGATGGAC +
Preference number: 5 (lower is better)
Translates to: PSWMFSLSLITSGVI*NVAFFMDCTSTRMD
Trigger: GTCCATCCGCGTGGACGTGCAGTCCATGAAGAACGCTACATTCCAGATCACTCCTGACGTGATCAAAGAGAGTGAGAACATCCAGCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp CAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACGCCTGCTGCCACACATaGCCCTTATTGCCACTGAGA +
Preference number: 5 (lower is better)
Translates to: QYAHHEGGGQASHCLHKYACCHT*PLLPLR
Trigger: TCTCAGTGGCAATAAGGGCAATGTGTGGCAGCAGGC...GTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TCTGCACAGATGGGACAGTTAAGGAACAATACCCGACAGACGCGATGGAAGTGTGCCTGGCCTCTGTCCTaGTTCTCTGCTCATCCTTGC +
Preference number: 5 (lower is better)
Translates to: SAQMGQLRNNTRQTRWKCAWPLS*FSAHPC
Trigger: GCAAGGATGAGCAGAGAACAAGGACAGAGGCCAGGC...ACACTTCCATCGCGTCTGTCGGGTATTGTTCCTTAACTGTCCCATCTGTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGAAGGCTGGAGTGCTTTTTGGCATTTaGCCCTGTACACACCCTCCT +
Preference number: 5 (lower is better)
Translates to: QLHSHIFWCFGGDGWKAGVLFGI*PCTHPP
Trigger: AGGAGGGTGTGTACAGGGCAAAATGCCAAAAAGCAC...TCCAGCCTTCCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTCCAAACTCCCTGCAGTaGTTTGGCAGGAGACCTCAG +
Preference number: 5 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCPNSLQ*FGRRPQ
Trigger: CTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTTGG...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GAATCTTCTATCCCACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCGTGTTGGGGGAGCGTTaGGGGTTCTGGGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: ESSIPLHSCSSVQLDPSPVLGER*GFWVRA
Trigger: TGCCCTCACCCAGAACCCCAAACGCTCCCCCAACAC...GGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTGGGATAGAAGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CAA 90 bp GGTCTGAGGCAGCTGCACTCCCATATCTTCTGGTGCTTTGGTGGAGATGGCTGGACACGCTCGCTGATATaGTCCTCTTTCACCACACAT +
Preference number: 5 (lower is better)
Translates to: GLRQLHSHIFWCFGGDGWTRSLI*SSFTTH
Trigger: ATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGT...CCAGCCATCTCCACCAAAGCACCAGAAGATATGGGAGTGCAGCTGCCTCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp ATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCAGATGTCTCCTGGAACTaGTCCGAGGCGCTACCTGCC +
Preference number: 5 (lower is better)
Translates to: MICANGLGAPVDAESSIPDVSWN*SEALPA
Trigger: GGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATC...TGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp GTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTGTCTTCTTGGCAGGGTaGCCCACATTGTTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VVEEGDTVELGAGIVEGTVFLAG*PTLLVA
Trigger: AGCCACCAACAATGTGGGCAACCCTGCCAAGAAGAC...AGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp ACTCGGCAGGGTGGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGATGTTCTCACTCTCTTaGATCACGTCAGGAGTGATC +
Preference number: 5 (lower is better)
Translates to: TRQGGGVLVIHSHLPQKKMFSLS*ITSGVI
Trigger: GATCACTCCTGACGTGATCAAAGAGAGTGAGAACAT...CTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACCACCCTGCCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCTCAAAGTGGCAGGTGTaGTCTGAAAGGTTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: RGHPRWQFRASRENVPRGSKWQV*SERFGE
Trigger: CTCTCCGAACCTTTCAGACAACACCTGCCACTTTGA...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434837.8
ENST00000650466.1
ENST00000681472.1
CDS-3UTR CAA 90 bp CGGTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGCCTTACTCCCCTTCCTaGAGCCTTCTAAGTTTTTGG +
Preference number: 5 (lower is better)
Translates to: RSQSNSEDILGGSSGLPEPYSPS*SLLSFW
Trigger: CCAAAAACTTAGAAGGCTCAAGGAAGGGGAGTAAGG...CTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGACCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGTCAGCCAGAGCCCCTCCAGCATGACGGTCTCAGAGCAACTCAGAGGACAAAAGGTTGGCATAACTaGATCTTAGGGCAAGGATGC +
Preference number: 5 (lower is better)
Translates to: DGQPEPLQHDGLRATQRTKGWHN*ILGQGC
Trigger: GCATCCTTGCCCTAAGATCAAGTTATGCCAACCTTT...TGTCCTCTGAGTTGCTCTGAGACCGTCATGCTGGAGGGGCTCTGGCTGACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGCTGGGCACGGAAAACCATCCCTGTaGCAACTCCTGTTTGGATTT +
Preference number: 5 (lower is better)
Translates to: HSTGQWSGFHTRLTCAGHGKPSL*QLLFGF
Trigger: AAATCCAAACAGGAGTTGCAACAGGGATGGTTTTCC...GTGCCCAGCACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GTTGGGGGAGCGTTTGGGGTTCTGGGTGAGGGCATTCTGCCGCGTCCAGTCAAAGCATGTCACATTCTATaGCACAAACAAGGCACTAAG +
Preference number: 5 (lower is better)
Translates to: VGGAFGVLGEGILPRPVKACHIL*HKQGTK
Trigger: CTTAGTGCCTTGTTTGTGCAATAGAATGTGACATGC...TTTGACTGGACGCGGCAGAATGCCCTCACCCAGAACCCCAAACGCTCCCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp TGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATCGATGGGTCAGGAATTaGGACAGAGCTTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: CANGLGAPVDAESSIPLHRWVRN*DRAWPS
Trigger: GCTCGGCCAAGCTCTGTCCAAATTCCTGACCCATCG...ATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CAA 90 bp GTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACCACCTCCTTCCCGTCTaGCACCTTTATTGGGATCCG +
Preference number: 5 (lower is better)
Translates to: VCSSRGWGPGFSLFTQVHHLLPV*HLYWDP
Trigger: CGGATCCCAATAAAGGTGCAAGACGGGAAGGAGGTG...GTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS CCA 90 bp TTGATGAAATGGAGCAAAGAACACAGACCTCCGTGTCCTACAGCATaGGGCTGTCAAGGAGCATTAGGGGTATCAGGAGTAGCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: LMKWSKEHRPPCPTA*GCQGALGVSGVAGG
Trigger: CCCACCAGCTACTCCTGATACCCCTAATGCTCCTTGACAGCCCCATGCTGTAGGACACGGAGGTCTGTGTTCTTTGCTCCATTTCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS-3UTR CAA 90 bp AGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTCACTATACAATGTGGACACTTaGGTGTGCCGGGGGCAAGGT +
Preference number: 5 (lower is better)
Translates to: RRRRHSRTWRWHCRGDSLYNVDT*VCRGQG
Trigger: ACCTTGCCCCCGGCACACCAAAGTGTCCACATTGTA...TAGTGAGTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGACCACTTCCAAATTCATaGTCTGATATGGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGPLPNS*SDMGAP
Trigger: TGGTGCCCCCATATCAGACAATGAATTTGGAAGTGG...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GTCTCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGGCTTTTCAACATTTCTaGATGTCCGACTGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: VSEQLRGHPRWQFRASREAFQHF*MSDCAP
Trigger: TGGAGCGCAGTCGGACATCAAGAAATGTTGAAAAGC...CTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACCCAAAGAGGGAGCACTaGGGGCTATTCATCTCTGGT +
Preference number: 5 (lower is better)
Translates to: FQRERSKRPELKLQGIFNPKREH*GLFISG
Trigger: ACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGG...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AGGGTAAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGGAGGGGATCAAACTTTaGAGGTCCATCCTCACTCTG +
Preference number: 5 (lower is better)
Translates to: RVKSEAHHECSKDKAYVAEGIKL*RSILTL
Trigger: CAGAGTGAGGATGGACCTCAAAAGTTTGATCCCCTC...CGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GATGGCTGGAAGGCTGGACTCAGCTGGGATGGTCAGCCAGAGCCCCTCCAGCATGAAAGTTTGAGTCTTTaGAAAAATATTCGCGCTCTC +
Preference number: 5 (lower is better)
Translates to: DGWKAGLSWDGQPEPLQHESLSL*KNIRAL
Trigger: GAGAGCGCGAATATTTTTCAAAAGACTCAAACTTTC...ATGCTGGAGGGGCTCTGGCTGACCATCCCAGCTGAGTCCAGCCTTCCAGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGGAACAAGGGAGACAAGTCTCCCCTGTCGGAGCAGCCAGGGTTGCGGGGCAAAGAAAGTTTGAGTCTTTaGAAAAATATTCGCGCTCTC +
Preference number: 5 (lower is better)
Translates to: GNKGDKSPLSEQPGLRGKESLSL*KNIRAL
Trigger: GAGAGCGCGAATATTTTTCAAAAGACTCAAACTTTC...TTTGCCCCGCAACCCTGGCTGCTCCGACAGGGGAGACTTGTCTCCCTTGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTACCAGCAGTGCAGCCTCCTaGTCCACGCGGGACCAGAGC +
Preference number: 5 (lower is better)
Translates to: LLHDEPLYLHLLKVTPSTSSAAS*STRDQS
Trigger: GCTCTGGTCCCGCGTGGACAAGGAGGCTGCACTGCT...GGTAGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAATCCACACCCTTGATTaGGGGTCACTTTGCAAATGC +
Preference number: 5 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGIHTLD*GSLCKC
Trigger: GCATTTGCAAAGTGACCCCAAATCAAGGGTGTGGAT...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AAACTCCCTGCAGTTGTTTGGCAGGAGACCTCAGGGGCAGTGACAAGCGGTGTGATAATGCACCTGTACTaGAGTGAGCTTGAGCGGATT +
Preference number: 5 (lower is better)
Translates to: KLPAVVWQETSGAVTSGVIMHLY*SELERI
Trigger: AATCCGCTCAAGCTCACTCAAGTACAGGTGCATTAT...CACACCGCTTGTCACTGCCCCTGAGGTCTCCTGCCAAACAACTGCAGGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCCTGGATCCTAGAGCTACCTaGAATCCAAAATGCCCATCT +
Preference number: 5 (lower is better)
Translates to: GHPRWQFRASRENVPRGLDPRAT*NPKCPS
Trigger: AGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATC...CAGGCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GTGAACAGGTCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTGGGCCAGGCTTCTCATaGTTTACACAAGTACACAGC +
Preference number: 5 (lower is better)
Translates to: VNRSVCSSRGWGPGFSLFGPGFS*FTQVHS
Trigger: GCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCC...AAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGACCTGTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TGTGGTAGAAGAAGGAGACACAGTAGAACTTGGCGCTGGCATTGTAGAGGGGACTCAAAGTGGCAGGTGTaGTCTCATAGCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: CGRRRRHSRTWRWHCRGDSKWQV*SHSCGA
Trigger: TGCCCCACAGCTATGAGACAACACCTGCCACTTTGA...GTCCCCTCTACAATGCCAGCGCCAAGTTCTACTGTGTCTCCTTCTTCTACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000502298.1
ENST00000680397.1
CDS-3UTR CAA 90 bp GGTGGAGTCCTGGTCATCCACTCTCACCTACCCCAGAAGAAGCTTCTTATGAAGACCCAAATGAACTGGTaGTCCTACCTGGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GGVLVIHSHLPQKKLLMKTQMNW*SYLGKP
Trigger: TGGCTTCCCCAGGTAGGACAACCAGTTCATTTGGGT...CTTCATAAGAAGCTTCTTCTGGGGTAGGTGAGAGTGGATGACCAGGACTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS TCA 90 bp CACTCGGGTCTAGCAAACTGGTATCCTTGCTTTTCTTTCAACACTTaGGGGCCAGTTCCTGCCTTAGGGCCTTTGCTTGTGATGTTGCCC +
Preference number: 5 (lower is better)
Translates to: HSGLANWYPCFSFNT*GPVPALGPLLVMLP
Trigger: GGGCAACATCACAAGCAAAGGCCCTAAGGCAGGAACTGGCCCTCAAGTGTTGAAAGAAAAGCAAGGATACCAGTTTGCTAGACCCGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS TCA 90 bp AGCCTGAGTGAGTGTGGGGCACACCTTCACACAGTCAGAGCCACATaGTTCCCATCACTCAGACATTCTGAACCCCTATTCAGACCCAAA +
Preference number: 5 (lower is better)
Translates to: SLSECGAHLHTVRAT*FPSLRHSEPLFRPK
Trigger: TTTGGGTCTGAATAGGGGTTCAGAATGTCTGAGTGATGGGAATCATGTGGCTCTGACTGTGTGAAGGTGTGCCCCACACTCACTCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS CCA 90 bp CCCAGCTGGATGTTCTCACTCTCTTTGATCACGTCAGGAGTGATCTaGAATGTAGCGTTCTTCATGGATCGCACCAGCAGGTTGACAGTC +
Preference number: 5 (lower is better)
Translates to: PSWMFSLSLITSGVI*NVAFFMDRTSRLTV
Trigger: GACTGTCAACCTGCTGGTGCGATCCATGAAGAACGCTACATTCCAGATCACTCCTGACGTGATCAAAGAGAGTGAGAACATCCAGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS CCA 90 bp TTAAGCCAGTCCTGGTCCTACAGAGATCCTCCCTTCTGCTGTATCTaGCCAAAGATTCTAGCATCACAAGGAACTCAGCGACCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: LSQSWSYRDPPFCCI*PKILASQGTQRPPV
Trigger: GACAGGAGGTCGCTGAGTTCCTTGTGATGCTAGAATCTTTGGCCAGATACAGCAGAAGGGAGGATCTCTGTAGGACCAGGACTGGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCACTAGACAGTGCTTTTaGGCATTTTGCCCTGTACAC +
Preference number: 5 (lower is better)
Translates to: RGHPRWQFRASRENVPRGTRQCF*AFCPVH
Trigger: GTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAGT...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AATGGTTTGGGAGCCCCAGTGGATGCAGAATCTTCTATCCCACTCCATTCTTGTCGCGTCCAGTCAAAGTaGTCTGTCAGGTCCTGGGTA +
Preference number: 5 (lower is better)
Translates to: NGLGAPVDAESSIPLHSCRVQSK*SVRSWV
Trigger: TACCCAGGACCTGACAGACAACTTTGACTGGACGCG...ACAAGAATGGAGTGGGATAGAAGATTCTGCATCCACTGGGGCTCCCAAACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS-3UTR CAA 90 bp TCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTGACACGCTCGCTGATATaGTCCTCTTTCACCACACAT +
Preference number: 5 (lower is better)
Translates to: SSRGWGPGFSLFTQVHSLTRSLI*SSFTTH
Trigger: ATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGT...CAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TCAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTAAGGTTGACAGTCTTCTaGGCAGGGTTGCCCACATTG +
Preference number: 5 (lower is better)
Translates to: SVCSSRGWGPGFSLFTQVRLTVF*AGLPTL
Trigger: CAATGTGGGCAACCCTGCCAAGAAGACTGTCAACCT...TACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAATGTTCTCACTCTCTTaGATCACGTCAGGAGTGATC +
Preference number: 5 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGMFSLS*ITSGVI
Trigger: GATCACTCCTGACGTGATCAAAGAGAGTGAGAACAT...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TTGCTTAAAGTCACTCCGTCTACCATTACGGCTGAGGAAAACAGTGAAGATGCTGCCTTGACCACCGCATaGTGCTGGTTCAACTGGCGG +
Preference number: 5 (lower is better)
Translates to: LLKVTPSTITAEENSEDAALTTA*CWFNWR
Trigger: CCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGC...AGCATCTTCACTGTTTTCCTCAGCCGTAATGGTAGACGGAGTGACTTTAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CAA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGAAAGGTTGGCATAACTaGATCTTAGGGCAAGGATGC +
Preference number: 5 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVKGWHN*ILGQGC
Trigger: GCATCCTTGCCCTAAGATCAAGTTATGCCAACCTTT...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AGGGTAAAGTCAGAAGCACACCACGAGTGCAGCAAGGACAAGGCCTATGTTGCGATGACATCCACACCCTaGATTTGGGGTCACTTTGCA +
Preference number: 5 (lower is better)
Translates to: RVKSEAHHECSKDKAYVAMTSTP*IWGHFA
Trigger: TGCAAAGTGACCCCAAATCAAGGGTGTGGATGTCAT...CGCAACATAGGCCTTGTCCTTGCTGCACTCGTGGTGTGCTTCTGACTTTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CATGGAGACCTAGAGGGCCACCAGAGTTGGGCTGAGATGGTGATTATGTGGGTGATAATGCACCTGTACTaGAGTGAGCTTGAGCGGATT +
Preference number: 5 (lower is better)
Translates to: HGDLEGHQSWAEMVIMWVIMHLY*SELERI
Trigger: AATCCGCTCAAGCTCACTCAAGTACAGGTGCATTAT...CACCCACATAATCACCATCTCAGCCCAACTCTGGTGGCCCTCTAGGTCTCCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACGTTCCAAGAGGCGATCCTAGAGCTACCTaGAATCCAAAATGCCCATCT +
Preference number: 5 (lower is better)
Translates to: RGHPRWQFRASRENVPRGDPRAT*NPKCPS
Trigger: AGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATC...GCCTCTTGGAACGTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CTACCCCAGAAGAAGCTTCTTATGAAGTCCAGACCCAGCCACGGGCAAAATGATATCTGTGCAAATGGTTaGGGAGCCCCAGTGGATGCA +
Preference number: 5 (lower is better)
Translates to: LPQKKLLMKSRPSHGQNDICANG*GAPVDA
Trigger: TGCATCCACTGGGGCTCCCAAACCATTTGCACAGAT...ATCATTTTGCCCGTGGCTGGGTCTGGACTTCATAAGAAGCTTCTTCTGGGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS TCA 90 bp CCTTCACACAGTCAGAGCCACATGATTCCCATCACTCAGACATTCTaGACCCCTATTCAGACCCAAACACCCTCCCTCAACAGACAGGAA +
Preference number: 5 (lower is better)
Translates to: PSHSQSHMIPITQTF*TPIQTQTPSLNRQE
Trigger: TTCCTGTCTGTTGAGGGAGGGTGTTTGGGTCTGAATAGGGGTTCAGAATGTCTGAGTGATGGGAATCATGTGGCTCTGACTGTGTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS CCA 90 bp GTTCACCGGGTCCCTGAAAATGAAGATGGGAGATACTTGATGAAATaGAGCAAAGAACACAGACCTCCGTGTCCTACAGCATGGGGCTGT +
Preference number: 5 (lower is better)
Translates to: VHRVPENEDGRYLMK*SKEHRPPCPTAWGC
Trigger: ACAGCCCCATGCTGTAGGACACGGAGGTCTGTGTTCTTTGCTCCATTTCATCAAGTATCTCCCATCTTCATTTTCAGGGACCCGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS-3UTR CAA 90 bp GGGTATAGCCACAGATCTTCTCATCCTCAAAGTGGCAGGTGTTGTCTGAAAGGTGGCGGGGGTCAGTCTTaGGTACAATGTGGACACTTT +
Preference number: 5 (lower is better)
Translates to: GYSHRSSHPQSGRCCLKGGGGQS*VQCGHF
Trigger: AAAGTGTCCACATTGTACCAAAGACTGACCCCCGCC...ACCTTTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGTGGCTATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp TTCCAGAGAGAACGTTCCAAGAGGCCTGAGCTGAAGCTCCAAGGCATCTTCAACCCACTTCCAAATTCATaGTCTGATATGGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: FQRERSKRPELKLQGIFNPLPNS*SDMGAP
Trigger: TGGTGCCCCCATATCAGACAATGAATTTGGAAGTGG...GTTGAAGATGCCTTGGAGCTTCAGCTCAGGCCTCTTGGAACGTTCTCTCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAGGACGACTGACAAACTaGTCGTTTCCCCGCACTGGG +
Preference number: 5 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPGRLTN*SFPRTG
Trigger: CCCAGTGCGGGGAAACGACAAGTTTGTCAGTCGTCC...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TTCAGCAGACACATTTTGTCAATCCCAGGTCAAGCCATCCTCAAGGCAGGGCTGACACGCTCGCTGATATaGTCCTCTTTCACCACACAT +
Preference number: 5 (lower is better)
Translates to: FSRHILSIPGQAILKAGLTRSLI*SSFTTH
Trigger: ATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGT...CAGCCCTGCCTTGAGGATGGCTTGACCTGGGATTGACAAAATGTGTCTGCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp GGGTATAGCCACAGATCTTCTCATCCTCAAAGTGGCAGGTGTTGTCTGAAAGGTAGGTTGACAGTCTTCTaGGCAGGGTTGCCCACATTG +
Preference number: 5 (lower is better)
Translates to: GYSHRSSHPQSGRCCLKGRLTVF*AGLPTL
Trigger: CAATGTGGGCAACCCTGCCAAGAAGACTGTCAACCT...ACCTTTCAGACAACACCTGCCACTTTGAGGATGAGAAGATCTGTGGCTATACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS-3UTR CAA 90 bp AAACTTCTCCACGATGAGCCTTTATATCTACATTTGCTTAAAGTCACTCCGTCTACCACGGCCCTACCCTaGGGCACACTGATGGTGGGC +
Preference number: 5 (lower is better)
Translates to: KLLHDEPLYLHLLKVTPSTTALP*GTLMVG
Trigger: GCCCACCATCAGTGTGCCCAAGGGTAGGGCCGTGGT...AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGGCTCATCGTGGAGAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp AGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACATCAAAGTGGCAGGTGTaGTCTGAAAGGTTCGGAGAG +
Preference number: 5 (lower is better)
Translates to: SMLITRVGARLLIVYTSTSKWQV*SERFGE
Trigger: CTCTCCGAACCTTTCAGACAACACCTGCCACTTTGA...TGTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp GAACCCCAAAGAGGGAGCACTTGGGGCTATTCATCTCTGGTGCTCCAATGCCTAAGTTTTTGGGCCCTGTaGGCCTTTGCATATTCTGTT +
Preference number: 5 (lower is better)
Translates to: EPQRGSTWGYSSLVLQCLSFWAL*AFAYSV
Trigger: AACAGAATATGCAAAGGCCAACAGGGCCCAAAAACT...TAGGCATTGGAGCACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp AAAGAGGTGTCAGGCCCATCTCTGAGAGGTAGGGGTGGAAGGAGCATTCCAGGAGCATGTCACATTCTATaGCACAAACAAGGCACTAAG +
Preference number: 5 (lower is better)
Translates to: KEVSGPSLRGRGGRSIPGACHIL*HKQGTK
Trigger: CTTAGTGCCTTGTTTGTGCAATAGAATGTGACATGC...TCCTGGAATGCTCCTTCCACCCCTACCTCTCAGAGATGGGCCTGACACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CACTCCATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTCAAAGTGGCAGGTGTaGTCTCATAGCTGTGGGGCA +
Preference number: 5 (lower is better)
Translates to: HSILVHQFSLTHHPSCGNSKWQV*SHSCGA
Trigger: TGCCCCACAGCTATGAGACAACACCTGCCACTTTGA...GTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAATGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS TCA 90 bp GGGTGGAATAAACACCAGCAAGTGAAAGCTTGCAGGAGGCAGATTTaGACTGCATCTAAGGAAGACCCTGGATGTATCGGATTTGCCCAG +
Preference number: 5 (lower is better)
Translates to: GWNKHQQVKACRRQI*TASKEDPGCIGFAQ
Trigger: CTGGGCAAATCCGATACATCCAGGGTCTTCCTTAGATGCAGTTCAAATCTGCCTCCTGCAAGCTTTCACTTGCTGGTGTTTATTCCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 90 bp ACCTACTTCTTAAGCCAGTCCTGGTCCTACAGAGATCCTCCCTTCTaGTGTATCTGGCCAAAGATTCTAGCATCACAAGGAACTCAGCGA +
Preference number: 5 (lower is better)
Translates to: TYFLSQSWSYRDPPF*CIWPKILASQGTQR
Trigger: TCGCTGAGTTCCTTGTGATGCTAGAATCTTTGGCCAGATACAGCAGAAGGGAGGATCTCTGTAGGACCAGGACTGGCTTAAGAAGTAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp ACGGGCAAAATGATCTGTGCAAATGGTTTGGGAGCCCCAGTGGATGCAGAATCTACACGCTCGCTGATATaGTCCTCTTTCACCACACAT +
Preference number: 5 (lower is better)
Translates to: TGKMICANGLGAPVDAESTRSLI*SSFTTH
Trigger: ATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGT...AGATTCTGCATCCACTGGGGCTCCCAAACCATTTGCACAGATCATTTTGCCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp CAGTATGCTCATCACGAGGGTGGGGGCCAGGCTTCTCATTGTTTACACAAGTACATGTTCTCACTCTCTTaGATCACGTCAGGAGTGATC +
Preference number: 5 (lower is better)
Translates to: QYAHHEGGGQASHCLHKYMFSLS*ITSGVI
Trigger: GATCACTCCTGACGTGATCAAAGAGAGTGAGAACAT...GTACTTGTGTAAACAATGAGAAGCCTGGCCCCCACCCTCGTGATGAGCATACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS-3UTR CAA 90 bp TACAGAATCCATTCCACCGGGCAATGGAGTGGTTTCCACACCAGGCTCACTTGTGGAAAACCATCCCTGTaGCAACTCCTGTTTGGATTT +
Preference number: 5 (lower is better)
Translates to: YRIHSTGQWSGFHTRLTCGKPSL*QLLFGF
Trigger: AAATCCAAACAGGAGTTGCAACAGGGATGGTTTTCC...ACAAGTGAGCCTGGTGTGGAAACCACTCCATTGCCCGGTGGAATGGATTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TCTGTAGATGATGATCCTAGAGCTACCTTGAATCCAAAATGCCCATCTGGTTCACGATGGGTCAGGAATTaGGACAGAGCTTGGCCGAGC +
Preference number: 5 (lower is better)
Translates to: SVDDDPRATLNPKCPSGSRWVRN*DRAWPS
Trigger: GCTCGGCCAAGCTCTGTCCAAATTCCTGACCCATCG...TGAACCAGATGGGCATTTTGGATTCAAGGTAGCTCTAGGATCATCATCTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS CCA 90 bp AGAAGAACTAGTCCCAGATCTTCGACCTACTTCTTAAGCCAGTCCTaGTCCTACAGAGATCCTCCCTTCTGCTGTATCTGGCCAAAGATT +
Preference number: 5 (lower is better)
Translates to: RRTSPRSSTYFLSQS*SYRDPPFCCIWPKI
Trigger: AATCTTTGGCCAGATACAGCAGAAGGGAGGATCTCTGTAGGACCAGGACTGGCTTAAGAAGTAGGTCGAAGATCTGGGACTAGTTCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS-3UTR CAA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATGGAGGGATGGTAGGGTaGGGTGCCGAGAAGGGAAAA +
Preference number: 5 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNGGMVG*GAEKGK
Trigger: TTTTCCCTTCTCGGCACCCAACCCTACCATCCCTCC...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp CTGCCTCTCTACAGGAAGGATAACATGGGATTTGCAGCCATCTTTATTCTACCAGAGGGGATCAAACTTTaGAGGTCCATCCTCACTCTG +
Preference number: 5 (lower is better)
Translates to: LPLYRKDNMGFAAIFILPEGIKL*RSILTL
Trigger: CAGAGTGAGGATGGACCTCAAAAGTTTGATCCCCTC...TGGTAGAATAAAGATGGCTGCAAATCCCATGTTATCCTTCCTGTAGAGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TCAGAGCAACTCAGAGGACATCCTAGGTGGCAGTTCAGGGCTTCCAGAGAGAACCCTTTATATCTACATTaGCTTAAAGTCACTCCGTCT +
Preference number: 5 (lower is better)
Translates to: SEQLRGHPRWQFRASRENPLYLH*LKVTPS
Trigger: AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGG...GTTCTCTCTGGAAGCCCTGAACTGCCACCTAGGATGTCCTCTGAGTTGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680397.1
CDS-3UTR CAA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATCCAAAGAGGGAGCACTaGGGGCTATTCATCTCTGGT +
Preference number: 5 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNPKREH*GLFISG
Trigger: ACCAGAGATGAATAGCCCCAAGTGCTCCCTCTTTGG...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp TGTCTTTGCAGTAAAGAAGGTGCTGGCAGGTCAGATAGAAACTTGTGCTTTAATACTAGACAGTGCTTTTaGGCATTTTGCCCTGTACAC +
Preference number: 5 (lower is better)
Translates to: CLCSKEGAGRSDRNLCFNTRQCF*AFCPVH
Trigger: GTGTACAGGGCAAAATGCCAAAAAGCACTGTCTAGT...ATTAAAGCACAAGTTTCTATCTGACCTGCCAGCACCTTCTTTACTGCAAAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS-3UTR CAA 90 bp ATTCTTGTTCATCAGTTCAGCTTGACCCATCACCCTAGCTGTGGAAACTTCTCCCCTTTATATCTACATTaGCTTAAAGTCACTCCGTCT +
Preference number: 5 (lower is better)
Translates to: ILVHQFSLTHHPSCGNFSPLYLH*LKVTPS
Trigger: AGACGGAGTGACTTTAAGCAAATGTAGATATAAAGG...GGAGAAGTTTCCACAGCTAGGGTGATGGGTCAAGCTGAACTGATGAACAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680397.1
ENST00000681439.1
CDS CCA 72 bp AGGAGCACGGGCCGGCCCAGCGCCTGGCGCACGTCCTaGGAACTGGGCTCCACCTCCGGCGGGAACTGCACG +
Preference number: 6 (lower is better)
Translates to: RSTGRPSAWRTS*ELGSTSGGNCT
Trigger: CGTGCAGTTCCCGCCGGAGGTGGAGCCCAGTTCCCAGGACGTGCGCCAGGCGCTGGGCCGGCCCGTGCTCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 90 bp GCGGGACCAGAGCACTGGCGGCCGCGGCTTGCCCCGCACCTCGCATaGCAGCTCGGCAGGCGATCCCTCGCGCACGGTCACCACGGCCCT +
Preference number: 6 (lower is better)
Translates to: AGPEHWRPRLAPHLA*QLGRRSLAHGHHGP
Trigger: AGGGCCGTGGTGACCGTGCGCGAGGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTCTGGTCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 72 bp CTGTCGCGAGTTACGGCGTCGAGGCGCAGCTCCGCGTaGTCCGGCGCCTCGGCGGCGGCGGGAACAACAGGC +
Preference number: 6 (lower is better)
Translates to: LSRVTASRRSSA*SGASAAAGTTG
Trigger: GCCTGTTGTTCCCGCCGCCGCCGAGGCGCCGGATCACGCGGAGCTGCGCCTCGACGCCGTAACTCGCGACAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp AGCACTGGCGGCCGCGGCTTGCCCCGCACCTCGCATTaGAGCTCGGCAGGCGATCCCTCGCGCACGGTCACC +
Preference number: 6 (lower is better)
Translates to: STGGRGLPRTSH*SSAGDPSRTVT
Trigger: GGTGACCGTGCGCGAGGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 72 bp GAGCACTGGCGGCCGCGGCTTGCCCCGCACCTCGCATaGCAGCTCGGCAGGCGATCCCTCGCGCACGGTCAC +
Preference number: 6 (lower is better)
Translates to: EHWRPRLAPHLA*QLGRRSLAHGH
Trigger: GTGACCGTGCGCGAGGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 90 bp GCAGCCTCCTTGTCCACGCGGGACCAGAGCACTGGCGGCCGCGGCTaGCCCCGCACCTCGCATTGCAGCTCGGCAGGCGATCCCTCGCGC +
Preference number: 6 (lower is better)
Translates to: AASLSTRDQSTGGRG*PRTSHCSSAGDPSR
Trigger: GCGCGAGGGATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTCTGGTCCCGCGTGGACAAGGAGGCTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 90 bp TCGGCGGCGGCGGGAACAACAGGCGGCGGCGGCAGCAGCTGCCCTTaGAAACGCCACACAGCCGAGGCGATGCGCTGGGGGCTGCCTCGC +
Preference number: 6 (lower is better)
Translates to: SAAAGTTGGGGSSCP*KRHTAEAMRWGLPR
Trigger: GCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCCGCCGCCGCCTGTTGTTCCCGCCGCCGCCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp TGTCCACGCGGGACCAGAGCACTGGCGGCCGCGGCTTaGCCCGCACCTCGCATTGCAGCTCGGCAGGCGATC +
Preference number: 6 (lower is better)
Translates to: CPRGTRALAAAA*PAPRIAARQAI
Trigger: GATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTCTGGTCCCGCGTGGACA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp GCGGCGACGAAGACCAGGAGACTGAAGAGGCGGAGGTaGCGGCGACCCGTGTTTCTCCTCCGGCGGGGCCGC +
Preference number: 6 (lower is better)
Translates to: AATKTRRLKRRR*RRPVFLLRRGR
Trigger: GCGGCCCCGCCGGAGGAGAAACACGGGTCGCCGCCACCTCCGCCTCTTCAGTCTCCTGGTCTTCGTCGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS CCA 72 bp CAGTGCAGCCTCCTTGTCCACGCGGGACCAGAGCACTaGCGGCCGCGGCTTGCCCCGCACCTCGCATTGCAG +
Preference number: 6 (lower is better)
Translates to: QCSLLVHAGPEH*RPRLAPHLALQ
Trigger: CTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTCTGGTCCCGCGTGGACAAGGAGGCTGCACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 72 bp TTGTCCACGCGGGACCAGAGCACTGGCGGCCGCGGCTaGCCCCGCACCTCGCATTGCAGCTCGGCAGGCGAT +
Preference number: 6 (lower is better)
Translates to: LSTRDQSTGGRG*PRTSHCSSAGD
Trigger: ATCGCCTGCCGAGCTGCAATGCGAGGTGCGGGGCAAGCCGCGGCCGCCAGTGCTCTGGTCCCGCGTGGACAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 72 bp GCGGGAACAACAGGCGGCGGCGGCAGCAGCTGCCCTTaGAAACGCCACACAGCCGAGGCGATGCGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: AGTTGGGGSSCP*KRHTAEAMRWG
Trigger: CCCCCAGCGCATCGCCTCGGCTGTGTGGCGTTTCAAAGGGCAGCTGCTGCCGCCGCCGCCTGTTGTTCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp CTGGGCTCCACCTCCGGCGGGAACTGCACGTTCAGCTaGACCTGGGCCTCACGGGGGCGCACGTTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: LGSTSGGNCTFS*TWASRGRTLKP
Trigger: TGGCTTCAACGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACGTGCAGTTCCCGCCGGAGGTGGAGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp TGCCCTTTGAAACGCCACACAGCCGAGGCGATGCGCTaGGGGCTGCCTCGCAGCAGCGAGCAGCGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: CPLKRHTAEAMR*GLPRSSEQRRS
Trigger: GCTCCTGCGCTGCTCGCTGCTGCGAGGCAGCCCCCAGCGCATCGCCTCGGCTGTGTGGCGTTTCAAAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 72 bp GGAGGCGGCGCTTCGATCCAACAGGCCACGGACGACTaGCAAACTTGTCGTTTCCCCGCACTGGGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: GGGASIQQATDD*QTCRFPALGPP
Trigger: GGGCGGCCCCAGTGCGGGGAAACGACAAGTTTGTCAGTCGTCCGTGGCCTGTTGGATCGAAGCGCCGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434837.8
ENST00000681472.1
CDS TCA 72 bp CGTTCAGCTGCACCTGGGCCTCACGGGGGCGCACGTTaGAGCCATTATAGCGGGCCGTCTGGCAGCGGTAGG +
Preference number: 6 (lower is better)
Translates to: RSAAPGPHGGAR*SHYSGPSGSGR
Trigger: CCTACCGCTGCCAGACGGCCCGCTATAATGGCTTCAACGTGCGCCCCCGTGAGGCCCAGGTGCAGCTGAACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp CCACATCGTTGGAGACGCTGCACTCGTAGCTGCCGCTaGTGTCGCGAGTTACGGCGTCGAGGCGCAGCTCCG +
Preference number: 6 (lower is better)
Translates to: PHRWRRCTRSCR*CRELRRRGAAP
Trigger: CGGAGCTGCGCCTCGACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp CCGAGCCCACATCGTTGGAGACGCTGCACTCGTAGCTaGCGCTGCTGTCGCGAGTTACGGCGTCGAGGCGCA +
Preference number: 6 (lower is better)
Translates to: PSPHRWRRCTRS*RCCRELRRRGA
Trigger: TGCGCCTCGACGCCGTAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp ACCACACATGCCTGGCCCGCATGCACGATCTGCGCCTaGGCTGGAGCTAGCTCCTGCTGTTGTGCCGGGGAC +
Preference number: 6 (lower is better)
Translates to: TTHAWPACTICA*AGASSCCCAGD
Trigger: GTCCCCGGCACAACAGCAGGAGCTAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CAA 90 bp AGCTCGGCAGGCGATCCCTCGCGCACGGTCACCACGGCCCTACCCTaGGGCACACTGATGGTGGGCGGCACTGTCTCAGAGGAGATGTTG +
Preference number: 6 (lower is better)
Translates to: SSAGDPSRTVTTALP*GTLMVGGTVSEEML
Trigger: CAACATCTCCTCTGAGACAGTGCCGCCCACCATCAGTGTGCCCAAGGGTAGGGCCGTGGTGACCGTGCGCGAGGGATCGCCTGCCGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 72 bp GCTCATCCAGGTACTGCACGTCCACGCGGATGGACTTaGTGGCCGGCACCCCCACGCCGTTCTCAGCCTTGC +
Preference number: 6 (lower is better)
Translates to: AHPGTARPRGWT*WPAPPRRSQPC
Trigger: GCAAGGCTGAGAACGGCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGACGTGCAGTACCTGGATGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681472.1
CDS GCA 72 bp AGAGGCAGGCAGCCGAGCCCACATCGTTGGAGACGCTaGACTCGTAGCTGCCGCTGCTGTCGCGAGTTACGG +
Preference number: 6 (lower is better)
Translates to: RGRQPSPHRWRR*TRSCRCCRELR
Trigger: CCGTAACTCGCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGGCTGCCTGCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp AGACCTGGAAGAGGCAGGCAGCCGAGCCCACATCGTTaGAGACGCTGCACTCGTAGCTGCCGCTGCTGTCGC +
Preference number: 6 (lower is better)
Translates to: RPGRGRQPSPHR*RRCTRSCRCCR
Trigger: GCGACAGCAGCGGCAGCTACGAGTGCAGCGTCTCCAACGATGTGGGCTCGGCTGCCTGCCTCTTCCAGGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 72 bp GGCTCATCCAGGTACTGCACGTCCACGCGGATGGACTaGATGGCCGGCACCCCCACGCCGTTCTCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: GSSRYCTSTRMD*MAGTPTPFSAL
Trigger: CAAGGCTGAGAACGGCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGACGTGCAGTACCTGGATGAGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681472.1
CDS CAA 90 bp CCCTTATTGCCACTGAGAGACCAGGCGTGCGTGTCCAGAGCCCCTTaGTTCCGGGACCGCACCAGGAGGTTGAGGGAGCCTGCGGTGGGT +
Preference number: 6 (lower is better)
Translates to: PLLPLRDQACVSRAP*FRDRTRRLREPAVG
Trigger: ACCCACCGCAGGCTCCCTCAACCTCCTGGTGCGGTCCCGGAACAAAGGGGCTCTGGACACGCACGCCTGGTCTCTCAGTGGCAATAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CAA 90 bp CGGCCGCCCTGCGTGCGTGCAATACGCTCGATGCGCAGCGTCTCGTaGAACACCGATGTCTCCTGGAACTTGTCCGAGGCGCTACCTGCC +
Preference number: 6 (lower is better)
Translates to: RPPCVRAIRSMRSVS*NTDVSWNLSEALPA
Trigger: GGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 90 bp GCTGGAAGGGATGCTGCCTGCTGCTGGAACGGCTGGAAGCTGGGATaGGACCGAGCTGAAAGGGGTGGAGCCTACGCCTTACGCAGGCGG +
Preference number: 6 (lower is better)
Translates to: AGRDAACCWNGWKLG*DRAERGGAYALRRR
Trigger: CCGCCTGCGTAAGGCGTAGGCTCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS TCA 72 bp CGTTCTTCATGGACTGCACGTCCACGCGGATGGACTTaGTGGCCGGCACCCCCACGCCGTTCTCAGCCTTGC +
Preference number: 6 (lower is better)
Translates to: RSSWTARPRGWT*WPAPPRRSQPC
Trigger: GCAAGGCTGAGAACGGCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGACGTGCAGTCCATGAAGAACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS GCA 72 bp CACCGATGTCTCCTGGAACTTGTCCGAGGCGCTACCTaGCGTCTTGGTCCACCGTACCTGGGGTCGAGGGTG +
Preference number: 6 (lower is better)
Translates to: HRCLLELVRGAT*RLGPPYLGSRV
Trigger: CACCCTCGACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp GGAGATGTTGACCTCGACGCTGAGGTCGGGCACGGGTaGCCCTGGGAAAGAAGCCATGCACAGGTAGGTGCC +
Preference number: 6 (lower is better)
Translates to: GDVDLDAEVGHG*PWERSHAQVGA
Trigger: GGCACCTACCTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTCAGCGTCGAGGTCAACATCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp GGGTTTCTGGGCACCGAAGGGCCTGCACCTCTAGGGTaGCAGCTCACGAAACGTGTGCTGTCTGGCCCAGTG +
Preference number: 6 (lower is better)
Translates to: GFLGTEGPAPLG*QLTKRVLSGPV
Trigger: CACTGGGCCAGACAGCACACGTTTCGTGAGCTGGCACCCTAGAGGTGCAGGCCCTTCGGTGCCCAGAAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS GCA 72 bp CTGGGGCTGAGAGGGGTTTCTGGGCACCGAAGGGCCTaGACCTCTAGGGTGCCAGCTCACGAAACGTGTGCT +
Preference number: 6 (lower is better)
Translates to: LGLRGVSGHRRA*TSRVPAHETCA
Trigger: AGCACACGTTTCGTGAGCTGGCACCCTAGAGGTGCAGGCCCTTCGGTGCCCAGAAACCCCTCTCAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS GCA 72 bp CCTGCTGTTGTGCCGGGGACCATGCTGGATGCTGGATaGAATGCCAGGCTGGAGTGGCCATCCCTGGTCCCT +
Preference number: 6 (lower is better)
Translates to: PAVVPGTMLDAG*NARLEWPSLVP
Trigger: AGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCACAACAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 72 bp CGCAGGTTCTTCAGCTTCAGGACCTTGGTCTCCCCCTaGGCAGCAGTGGACCACTGGGGTGAGGTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: RRFFSFRTLVSP*AAVDHWGEVPA
Trigger: AGCAGGCACCTCACCCCAGTGGTCCACTGCTGCCCAGGGGGAGACCAAGGTCCTGAAGCTGAAGAACCTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CCA 72 bp GTGGAGCCTACGCCTTACGCAGGCGGAGCCCAGACGTaGCTTGGATGGGTTTCGAAGGGGTCTAGGCCTGGT +
Preference number: 6 (lower is better)
Translates to: VEPTPYAGGAQT*LGWVSKGSRPG
Trigger: ACCAGGCCTAGACCCCTTCGAAACCCATCCAAGCCACGTCTGGGCTCCGCCTGCGTAAGGCGTAGGCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 72 bp GGGGCTGGAAGGGATGCTGCCTGCTGCTGGAACGGCTaGAAGCTGGGATTGGACCGAGCTGAAAGGGGTGGA +
Preference number: 6 (lower is better)
Translates to: GAGRDAACCWNG*KLGLDRAERGG
Trigger: TCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 72 bp CGGGGACCATGCTGGATGCTGGATGCAATGCCAGGCTaGAGTGGCCATCCCTGGTCCCTATGTGCCGCCTTC +
Preference number: 6 (lower is better)
Translates to: RGPCWMLDAMPG*SGHPWSLCAAF
Trigger: GAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CAA 72 bp AGCTGCCCCTTCTCCACACGCCGGACCGGGATGGCCTaGACCACCGCATTGTGCTGGTTCAACTGGCGGATG +
Preference number: 6 (lower is better)
Translates to: SCPFSTRRTGMA*TTALCWFNWRM
Trigger: CATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCGGCGTGTGGAGAAGGGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000502298.1
ENST00000505425.5
ENST00000510077.1
ENST00000650466.1
ENST00000680397.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 72 bp GCGTTCTTCATGGACTGCACGTCCACGCGGATGGACTaGATGGCCGGCACCCCCACGCCGTTCTCAGCCTTG +
Preference number: 6 (lower is better)
Translates to: AFFMDCTSTRMD*MAGTPTPFSAL
Trigger: CAAGGCTGAGAACGGCGTGGGGGTGCCGGCCATCAAGTCCATCCGCGTGGACGTGCAGTCCATGAAGAACGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CAA 90 bp AGGGCTGGTGGTGCCGTGGTGTTGGTGAGCCGGAAGGTGATGGCCTaGTCTGGGATGCCGCACACGTTACGCACAGACACCTGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RAGGAVVLVSRKVMA*SGMPHTLRTDTWQV
Trigger: CACCTGCCAGGTGTCTGTGCGTAACGTGTGCGGCATCCCAGACAAGGCCATCACCTTCCGGCTCACCAACACCACGGCACCACCAGCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS CAA 90 bp CGCTCGATGCGCAGCGTCTCGTTGAACACCGATGTCTCCTGGAACTaGTCCGAGGCGCTACCTGCCGTCTTGGTCCACCGTACCTGGGGT +
Preference number: 6 (lower is better)
Translates to: RSMRSVSLNTDVSWN*SEALPAVLVHRTWG
Trigger: ACCCCAGGTACGGTGGACCAAGACGGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCATCGAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 90 bp TACTCCAGCAGCTGCCCCTTCTCCACACGCCGGACCGGGATGGCCTaGACCACCGCATTGTGCTGGTTCAACTGGCGGATGCTGAGTCTG +
Preference number: 6 (lower is better)
Translates to: YSSSCPFSTRRTGMA*TTALCWFNWRMLSL
Trigger: CAGACTCAGCATCCGCCAGTTGAACCAGCACAATGCGGTGGTCAAGGCCATCCCGGTCCGGCGTGTGGAGAAGGGGCAGCTGCTGGAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000502298.1
ENST00000505425.5
ENST00000510077.1
ENST00000650466.1
ENST00000680397.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 90 bp AAGGGGTGGAGCCTACGCCTTACGCAGGCGGAGCCCAGACGTGGCTaGGATGGGTTTCGAAGGGGTCTAGGCCTGGTTTGGGTGCTGGTA +
Preference number: 6 (lower is better)
Translates to: KGWSLRLTQAEPRRG*DGFRRGLGLVWVLV
Trigger: TACCAGCACCCAAACCAGGCCTAGACCCCTTCGAAACCCATCCAAGCCACGTCTGGGCTCCGCCTGCGTAAGGCGTAGGCTCCACCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS TCA 72 bp AGGTGCCAAGGCCAGAAGAAGTCTGGGGCTCCCTCCTaGGTGTATCTGGGAGGGGTCAGCCCAGATCTCCCC +
Preference number: 6 (lower is better)
Translates to: RCQGQKKSGAPS*VYLGGVSPDLP
Trigger: GGGGAGATCTGGGCTGACCCCTCCCAGATACACTCAGGAGGGAGCCCCAGACTTCTTCTGGCCTTGGCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508399.1
CDS GCA 72 bp CTCAGCCTTGCAGTAGTAGCGGCCGCCCTGCGTGCGTaGAATACGCTCGATGCGCAGCGTCTCGTTGAACAC +
Preference number: 6 (lower is better)
Translates to: LSLAVVAAALRA*NTLDAQRLVEH
Trigger: GTGTTCAACGAGACGCTGCGCATCGAGCGTATTGCACGCACGCAGGGCGGCCGCTACTACTGCAAGGCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp AAAAGAGTGGGCTGTCTTGGGGGAGCATCCTGTCCCTaGACAGGACTATCCAGCAGGGCTGCTGCGGAGGGG +
Preference number: 6 (lower is better)
Translates to: KRVGCLGGASCP*TGLSSRAAAEG
Trigger: CCCCTCCGCAGCAGCCCTGCTGGATAGTCCTGTCCAGGGACAGGATGCTCCCCCAAGACAGCCCACTCTTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CCA 72 bp CGCTCGCTGATATTGTCCTCTTTCACCACACATGCCTaGCCCGCATGCACGATCTGCGCCTGGGCTGGAGCG +
Preference number: 6 (lower is better)
Translates to: RSLILSSFTTHA*PACTICAWAGA
Trigger: CGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS CCA 72 bp GTTGACCTCGACGCTGAGGTCGGGCACGGGTGCCCCTaGGAAAGAAGCCATGCACAGGTAGGTGCCATAGTC +
Preference number: 6 (lower is better)
Translates to: VDLDAEVGHGCP*ERSHAQVGAIV
Trigger: GACTATGGCACCTACCTGTGCATGGCTTCTTTCCCAGGGGCACCCGTGCCCGACCTCAGCGTCGAGGTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp TCAGCTTCAGGACCTTGGTCTCCCCCTGGGCAGCAGTaGACCACTGGGGTGAGGTGCCTGCTTGAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SASGPWSPPGQQ*TTGVRCLLESP
Trigger: TGGAGACTCAAGCAGGCACCTCACCCCAGTGGTCCACTGCTGCCCAGGGGGAGACCAAGGTCCTGAAGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CCA 72 bp ACGCCTTACGCAGGCGGAGCCCAGACGTGGCTTGGATaGGTTTCGAAGGGGTCTAGGCCTGGTTTGGGTGCT +
Preference number: 6 (lower is better)
Translates to: TPYAGGAQTWLG*VSKGSRPGLGA
Trigger: AGCACCCAAACCAGGCCTAGACCCCTTCGAAACCCATCCAAGCCACGTCTGGGCTCCGCCTGCGTAAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 72 bp GAAGGGATGCTGCCTGCTGCTGGAACGGCTGGAAGCTaGGATTGGACCGAGCTGAAAGGGGTGGAGCCTACG +
Preference number: 6 (lower is better)
Translates to: EGMLPAAGTAGS*DWTELKGVEPT
Trigger: CGTAGGCTCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 72 bp AGCTCCTGCTGTTGTGCCGGGGACCATGCTGGATGCTaGATGCAATGCCAGGCTGGAGTGGCCATCCCTGGT +
Preference number: 6 (lower is better)
Translates to: SSCCCAGDHAGC*MQCQAGVAIPG
Trigger: ACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCACAACAGCAGGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CAA 72 bp CTCGCACATCGCTCACCGTCTGGTGCACCGTCAGCATaGGCTCATCCAGGTACTGCACGTCCACGCGGATGG +
Preference number: 6 (lower is better)
Translates to: LAHRSPSGAPSA*AHPGTARPRGW
Trigger: CCATCCGCGTGGACGTGCAGTACCTGGATGAGCCAATGCTGACGGTGCACCAGACGGTGAGCGATGTGCGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000515437.5
ENST00000650466.1
ENST00000681472.1
CDS CAA 72 bp CCCCGCTTCCAGATGAAGCGGGCAGGCGGGTTGGAGTaGACAGTACAGCGCAGGAACACCGTCTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: PRFQMKRAGGLE*TVQRRNTVFSW
Trigger: CCAGGAGAAGACGGTGTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTGCCCGCTTCATCTGGAAGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000515437.5
ENST00000650466.1
ENST00000681472.1
CDS CAA 72 bp GGTGCCGTGGTGTTGGTGAGCCGGAAGGTGATGGCCTaGTCTGGGATGCCGCACACGTTACGCACAGACACC +
Preference number: 6 (lower is better)
Translates to: GAVVLVSRKVMA*SGMPHTLRTDT
Trigger: GGTGTCTGTGCGTAACGTGTGCGGCATCCCAGACAAGGCCATCACCTTCCGGCTCACCAACACCACGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS CAA 72 bp AGCCTACGCCTTACGCAGGCGGAGCCCAGACGTGGCTaGGATGGGTTTCGAAGGGGTCTAGGCCTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: SLRLTQAEPRRG*DGFRRGLGLVW
Trigger: CCAAACCAGGCCTAGACCCCTTCGAAACCCATCCAAGCCACGTCTGGGCTCCGCCTGCGTAAGGCGTAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS TCA 72 bp GGGTGTCCCCCTCCCGGATGGTGTAGACACGCTCGCTaGTATTGTCCTCTTTCACCACACATGCCTGGCCCG +
Preference number: 6 (lower is better)
Translates to: GCPPPGWCRHAR*YCPLSPHMPGP
Trigger: CGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGTCTACACCATCCGGGAGGGGGACACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 72 bp GCGTGCGTGCAATACGCTCGATGCGCAGCGTCTCGTTaGACACCGATGTCTCCTGGAACTTGTCCGAGGCGC +
Preference number: 6 (lower is better)
Translates to: ACVQYARCAASR*TPMSPGTCPRR
Trigger: GCGCCTCGGACAAGTTCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCATCGAGCGTATTGCACGCACGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 72 bp GCAGCCGCTTGGACATGCGTGCCGGCTTGCCATTCTTaGACCACTGGTAGGTCACCTTCTCCTGGGGCACTG +
Preference number: 6 (lower is better)
Translates to: AAAWTCVPACHS*TTGRSPSPGAL
Trigger: CAGTGCCCCAGGAGAAGGTGACCTACCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp ATCCTGTCCCTGGACAGGACTATCCAGCAGGGCTGCTaGGGAGGGGACCCCTGTCTCCAATCATGTTACCCC +
Preference number: 6 (lower is better)
Translates to: ILSLDRTIQQGC*GGDPCLQSCYP
Trigger: GGGGTAACATGATTGGAGACAGGGGTCCCCTCCGCAGCAGCCCTGCTGGATAGTCCTGTCCAGGGACAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 72 bp GACACGCTCGCTGATATTGTCCTCTTTCACCACACATaGCTGGCCCGCATGCACGATCTGCGCCTGGGCTGG +
Preference number: 6 (lower is better)
Translates to: DTLADIVLFHHT*LARMHDLRLGW
Trigger: CCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000434837.8
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp GATCCTGCTGTGCCTGGCCACAGGTTCCCAATACTCTaGCACCCAGCAGCAGACTGGGATGACCTGTCTGCC +
Preference number: 6 (lower is better)
Translates to: DPAVPGHRFPIL*HPAADWDDLSA
Trigger: GGCAGACAGGTCATCCCAGTCTGCTGCTGGGTGGCAGAGTATTGGGAACCTGTGGCCAGGCACAGCAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS GCA 72 bp TGTTGTGCCGGGGACCATGCTGGATGCTGGATGCAATaGCAGGCTGGAGTGGCCATCCCTGGTCCCTATGTG +
Preference number: 6 (lower is better)
Translates to: CCAGDHAGCWMQ*QAGVAIPGPYV
Trigger: CACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGTCCCCGGCACAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 72 bp TCGCACATCGCTCACCGTCTGGTGCACCGTCAGCATTaGCTCATCCAGGTACTGCACGTCCACGCGGATGGA +
Preference number: 6 (lower is better)
Translates to: SHIAHRLVHRQH*LIQVLHVHADG
Trigger: TCCATCCGCGTGGACGTGCAGTACCTGGATGAGCCAATGCTGACGGTGCACCAGACGGTGAGCGATGTGCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000515437.5
ENST00000650466.1
ENST00000681472.1
CDS CCA 72 bp CGTGGTGTTGGTGAGCCGGAAGGTGATGGCCTTGTCTaGGATGCCGCACACGTTACGCACAGACACCTGGCA +
Preference number: 6 (lower is better)
Translates to: RGVGEPEGDGLV*DAAHVTHRHLA
Trigger: TGCCAGGTGTCTGTGCGTAACGTGTGCGGCATCCCAGACAAGGCCATCACCTTCCGGCTCACCAACACCACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS CCA 72 bp GGCATCACCACCATCTCCTGGGACTATCAGGGCCCATaGGAAGAGGAGTCATCTCCTCGCCCCCAGATCCTG +
Preference number: 6 (lower is better)
Translates to: GITTISWDYQGP*EEESSPRPQIL
Trigger: CAGGATCTGGGGGCGAGGAGATGACTCCTCTTCCCATGGGCCCTGATAGTCCCAGGAGATGGTGGTGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CCA 72 bp CGCTCGCTGATATTGTCCTCTTTCACCACACATGCCTaGCCCGCATGCACGATCTGCGCCTGGGCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: RSLILSSFTTHA*PACTICAWAGA
Trigger: AGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATATCAGCGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508399.1
ENST00000515437.5
ENST00000681439.1
CDS CCA 72 bp ATGCTGCCTGCTGCTGGAACGGCTGGAAGCTGGGATTaGACCGAGCTGAAAGGGGTGGAGCCTACGCCTTAC +
Preference number: 6 (lower is better)
Translates to: MLPAAGTAGSWD*TELKGVEPTPY
Trigger: GTAAGGCGTAGGCTCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CAA 72 bp CGCAGCGTCTCGTTGAACACCGATGTCTCCTGGAACTaGTCCGAGGCGCTACCTGCCGTCTTGGTCCACCGT +
Preference number: 6 (lower is better)
Translates to: RSVSLNTDVSWN*SEALPAVLVHR
Trigger: ACGGTGGACCAAGACGGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTTCAACGAGACGCTGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 72 bp TCGGAACCCCGCTTCCAGATGAAGCGGGCAGGCGGGTaGGAGTTGACAGTACAGCGCAGGAACACCGTCTTC +
Preference number: 6 (lower is better)
Translates to: SEPRFQMKRAGG*ELTVQRRNTVF
Trigger: GAAGACGGTGTTCCTGCGCTGTACTGTCAACTCCAACCCGCCTGCCCGCTTCATCTGGAAGCGGGGTTCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000515437.5
ENST00000650466.1
ENST00000681472.1
CDS CAA 72 bp GGCAGCTCAGGATCATTGCGGGTCACCAGCAGCCGCTaGGACATGCGTGCCGGCTTGCCATTCTTGAACCAC +
Preference number: 6 (lower is better)
Translates to: GSSGSLRVTSSR*DMRAGLPFLNH
Trigger: GTGGTTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGACCCGCAATGATCCTGAGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 72 bp GATGCTGCCTGCTGCTGGAACGGCTGGAAGCTGGGATaGGACCGAGCTGAAAGGGGTGGAGCCTACGCCTTA +
Preference number: 6 (lower is better)
Translates to: DAACCWNGWKLG*DRAERGGAYAL
Trigger: TAAGGCGTAGGCTCCACCCCTTTCAGCTCGGTCCAATCCCAGCTTCCAGCCGTTCCAGCAGCAGGCAGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS TCA 72 bp CCTCAAAGTGGCAGGTGTTGTGCTCTGTGTAGTGGATaGTGCGGGAGGCCATGTCACCAGCCCCGAAGGTGG +
Preference number: 6 (lower is better)
Translates to: PQSGRCCALCSG*CGRPCHQPRRW
Trigger: CCACCTTCGGGGCTGGTGACATGGCCTCCCGCATCATCCACTACACAGAGCACAACACCTGCCACTTTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418178.2
ENST00000681439.1
CDS GCA 72 bp AGCATCCTGTCCCTGGACAGGACTATCCAGCAGGGCTaGTGCGGAGGGGACCCCTGTCTCCAATCATGTTAC +
Preference number: 6 (lower is better)
Translates to: SILSLDRTIQQG*CGGDPCLQSCY
Trigger: GTAACATGATTGGAGACAGGGGTCCCCTCCGCAGCAGCCCTGCTGGATAGTCCTGTCCAGGGACAGGATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 72 bp CATGGGAAGAGGAGTCATCTCCTCGCCCCCAGATCCTaGTGTGCCTGGCCACAGGTTCCCAATACTCTGCCA +
Preference number: 6 (lower is better)
Translates to: HGKRSHLLAPRS*CAWPQVPNTLP
Trigger: TGGCAGAGTATTGGGAACCTGTGGCCAGGCACAGCAGGATCTGGGGGCGAGGAGATGACTCCTCTTCCCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS GCA 72 bp ATATTGTCCTCTTTCACCACACATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCTGGAGCTGCTCCACCT +
Preference number: 6 (lower is better)
Translates to: ILSSFTTHAWPA*TICAWAGAAPP
Trigger: AGGTGGAGCAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515437.5
CDS GCA 72 bp ATATTGTCCTCTTTCACCACACATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCTGGAGCTGGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: ILSSFTTHAWPA*TICAWAGAGRR
Trigger: TCTCCTGCCAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508399.1
CDS GCA 72 bp ATATTGTCCTCTTTCACCACACATGCCTGGCCCGCATaGACGATCTGCGCCTGGGCTGGAGCTAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: ILSSFTTHAWPA*TICAWAGASSC
Trigger: GCAGGAGCTAGCTCCAGCCCAGGCGCAGATCGTGCATGCGGGCCAGGCATGTGTGGTGAAAGAGGACAATAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 72 bp TCGATGCGCAGCGTCTCGTTGAACACCGATGTCTCCTaGAACTTGTCCGAGGCGCTACCTGCCGTCTTGGTC +
Preference number: 6 (lower is better)
Translates to: SMRSVSLNTDVS*NLSEALPAVLV
Trigger: GACCAAGACGGCAGGTAGCGCCTCGGACAAGTTCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCATCGA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp GGGAACTTACTCGTACAACCCACACAAACATGGGGCTaGCCTGCAGCCACCGCTGAAAGCCCTCCTTGGCAG +
Preference number: 6 (lower is better)
Translates to: GNLLVQPTQTWG*PAATAESPPWQ
Trigger: CTGCCAAGGAGGGCTTTCAGCGGTGGCTGCAGGCCAGCCCCATGTTTGTGTGGGTTGTACGAGTAAGTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CCA 72 bp ACCTCTAGGGTGCCAGCTCACGAAACGTGTGCTGTCTaGCCCAGTGCCCCGCAACAACGTTCCAGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: TSRVPAHETCAV*PSAPQQRSREA
Trigger: AGCTTCTCTGGAACGTTGTTGCGGGGCACTGGGCCAGACAGCACACGTTTCGTGAGCTGGCACCCTAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510077.1
CDS CCA 72 bp CCCTCTGAGTCCACTGCAGCACGTAGGAGTAGTTCTTaGACAGCTTGTGGCGGAGACCTGGAAGAGGCAGGC +
Preference number: 6 (lower is better)
Translates to: PSESTAARRSSS*TACGGDLEEAG
Trigger: GCCTGCCTCTTCCAGGTCTCCGCCACAAGCTGTCCAAGAACTACTCCTACGTGCTGCAGTGGACTCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681472.1
CDS CCA 72 bp ACCATGCTGGATGCTGGATGCAATGCCAGGCTGGAGTaGCCATCCCTGGTCCCTATGTGCCGCCTTCACTCT +
Preference number: 6 (lower is better)
Translates to: TMLDAGCNARLE*PSLVPMCRLHS
Trigger: AGAGTGAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCATCCAGCATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CAA 72 bp TGCGTGCGTGCAATACGCTCGATGCGCAGCGTCTCGTaGAACACCGATGTCTCCTGGAACTTGTCCGAGGCG +
Preference number: 6 (lower is better)
Translates to: CVRAIRSMRSVS*NTDVSWNLSEA
Trigger: CGCCTCGGACAAGTTCCAGGAGACATCGGTGTTCAACGAGACGCTGCGCATCGAGCGTATTGCACGCACGCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000508399.1
ENST00000515437.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS TCA 72 bp AGGAGAAGTGGTATGGGGCGAGCCAGCTGCCCATCCTaGCCTGAGTGTAGAGGGGCTCATAGATGTCAACCC +
Preference number: 6 (lower is better)
Translates to: RRSGMGRASCPS*PECRGAHRCQP
Trigger: GGGTTGACATCTATGAGCCCCTCTACACTCAGGTCAGGATGGGCAGCTGGCTCGCCCCATACCACTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS GCA 72 bp TACAGCGCAGGAACACCGTCTTCTCCTGGTAGAAGTTaGCTCGCACATCGCTCACCGTCTGGTGCACCGTCA +
Preference number: 6 (lower is better)
Translates to: YSAGTPSSPGRS*LAHRSPSGAPS
Trigger: TGACGGTGCACCAGACGGTGAGCGATGTGCGAGGCAACTTCTACCAGGAGAAGACGGTGTTCCTGCGCTGTA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000515437.5
ENST00000650466.1
ENST00000681472.1
CDS GCA 72 bp ATCATTGCGGGTCACCAGCAGCCGCTTGGACATGCGTaGCGGCTTGCCATTCTTGAACCACTGGTAGGTCAC +
Preference number: 6 (lower is better)
Translates to: IIAGHQQPLGHA*RLAILEPLVGH
Trigger: GTGACCTACCAGTGGTTCAAGAATGGCAAGCCGGCACGCATGTCCAAGCGGCTGCTGGTGACCCGCAATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS GCA 72 bp CCCTATGTGCCGCCTTCACTCTCATGCTGTTTCTTCTaGTTCGCGGGTACAGAAAGACTGCTGGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: PYVPPSLSCCFF*FAGTERLLGRG
Trigger: CCCCCTCCCCAGCAGTCTTTCTGTACCCGCGAAGCAGAAGAAACAGCATGAGAGTGAAGGCGGCACATAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 72 bp CCTGCGGTGGGTGTGAAGACAGTGGGCAGTGAGATCTaGCCAGGGCACCCTCACCTTTCCACATTTACCAAG +
Preference number: 6 (lower is better)
Translates to: PAVGVKTVGSEI*PGHPHLSTFTK
Trigger: CTTGGTAAATGTGGAAAGGTGAGGGTGCCCTGGCCAGATCTCACTGCCCACTGTCTTCACACCCACCGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 72 bp GCTGCTCCACCTGTCGCCGTTATTTATCTCAGCGTGTaGGCAAGAATTGTTTTAGGTCGGCCCGTGGGAGCG +
Preference number: 6 (lower is better)
Translates to: AAPPVAVIYLSV*ARIVLGRPVGA
Trigger: CGCTCCCACGGGCCGACCTAAAACAATTCTTGCGCACACGCTGAGATAAATAACGGCGACAGGTGGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515437.5
CDS GCA 72 bp AATGCCAGGCTGGAGTGGCCATCCCTGGTCCCTATGTaGCGCCTTCACTCTCATGCTGTTTCTTCTGCTTCG +
Preference number: 6 (lower is better)
Translates to: NARLEWPSLVPM*RLHSHAVSSAS
Trigger: CGAAGCAGAAGAAACAGCATGAGAGTGAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 72 bp CATCGCTGTCCTTCTCCTGGCCTTCCACACCTGATCTaGGCGCTGTCAGCTTCTCTGATCTCATTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: HRCPSPGLPHLI*ALSASLISFAA
Trigger: GGCAGCAAATGAGATCAGAGAAGCTGACAGCGCCCAGATCAGGTGTGGAAGGCCAGGAGAAGGACAGCGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CCA 72 bp GGCACTGCATCCACGTGGCACGATAGCTTCAGGTCCTaGCCCAGCTGGATGTTCTCACTCTCTTTGATCACG +
Preference number: 6 (lower is better)
Translates to: GTASTWHDSFRS*PSWMFSLSLIT
Trigger: CGTGATCAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATCGTGCCACGTGGATGCAGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp AGCCCTCCTTGGCAGAATGGCATCACCACCATCTCCTaGGACTATCAGGGCCCATGGGAAGAGGAGTCATCT +
Preference number: 6 (lower is better)
Translates to: SPPWQNGITTIS*DYQGPWEEESS
Trigger: AGATGACTCCTCTTCCCATGGGCCCTGATAGTCCCAGGAGATGGTGGTGATGCCATTCTGCCAAGGAGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CCA 72 bp ATGCTGGATGCAATGCCAGGCTGGAGTGGCCATCCCTaGTCCCTATGTGCCGCCTTCACTCTCATGCTGTTT +
Preference number: 6 (lower is better)
Translates to: MLDAMPGWSGHP*SLCAAFTLMLF
Trigger: AAACAGCATGAGAGTGAAGGCGGCACATAGGGACCAGGGATGGCCACTCCAGCCTGGCATTGCATCCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS TCA 72 bp TCTCCAATCATGTTACCCCCTCTGCTCAGTCTCCTTTaGGGCTTCCCATCGCTGTCCTTCTCCTGGCCTTCC +
Preference number: 6 (lower is better)
Translates to: SPIMLPPLLSLL*GFPSLSFSWPS
Trigger: GGAAGGCCAGGAGAAGGACAGCGATGGGAAGCCTCAAAGGAGACTGAGCAGAGGGGGTAACATGATTGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 72 bp CAGAAGGCCAGAGAGGACAGTCTGTGTGACTGTCCGTaGTCTGCATTCCCCATGGGGTGGAATAAACACCAG +
Preference number: 6 (lower is better)
Translates to: QKAREDSLCDCP*SAFPMGWNKHQ
Trigger: CTGGTGTTTATTCCACCCCATGGGGAATGCAGAGCACGGACAGTCACACAGACTGTCCTCTCTGGCCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 72 bp GCCATCCCTGGTCCCTATGTGCCGCCTTCACTCTCATaGTGTTTCTTCTGCTTCGCGGGTACAGAAAGACTG +
Preference number: 6 (lower is better)
Translates to: AIPGPYVPPSLS*CFFCFAGTERL
Trigger: CAGTCTTTCTGTACCCGCGAAGCAGAAGAAACAGCATGAGAGTGAAGGCGGCACATAGGGACCAGGGATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 72 bp TGTATCGGATTTGCCCAGCAAAAGAGTGGGCTGTCTTaGGGGAGCATCCTGTCCCTGGACAGGACTATCCAG +
Preference number: 6 (lower is better)
Translates to: CIGFAQQKSGLS*GSILSLDRTIQ
Trigger: CTGGATAGTCCTGTCCAGGGACAGGATGCTCCCCCAAGACAGCCCACTCTTTTGCTGGGCAAATCCGATACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CCA 72 bp TCCACGTGGCACGATAGCTTCAGGTCCTGGCCCAGCTaGATGTTCTCACTCTCTTTGATCACGTCAGGAGTG +
Preference number: 6 (lower is better)
Translates to: STWHDSFRSWPS*MFSLSLITSGV
Trigger: CACTCCTGACGTGATCAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATCGTGCCACGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CCA 72 bp AGGTTGCCCTTGTGCACACTGGCAAGTACCAGGCCTTaGTTTCTCCAGTCTGGGAAACGGAGGGGTAAGAAG +
Preference number: 6 (lower is better)
Translates to: RLPLCTLASTRP*FLQSGKRRGKK
Trigger: CTTCTTACCCCTCCGTTTCCCAGACTGGAGAAACCAAGGCCTGGTACTTGCCAGTGTGCACAAGGGCAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CAA 72 bp GTCTCCAATCATGTTACCCCCTCTGCTCAGTCTCCTTaGAGGCTTCCCATCGCTGTCCTTCTCCTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: VSNHVTPSAQSP*RLPIAVLLLAF
Trigger: GAAGGCCAGGAGAAGGACAGCGATGGGAAGCCTCAAAGGAGACTGAGCAGAGGGGGTAACATGATTGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CAA 72 bp ATGTATCGGATTTGCCCAGCAAAAGAGTGGGCTGTCTaGGGGGAGCATCCTGTCCCTGGACAGGACTATCCA +
Preference number: 6 (lower is better)
Translates to: MYRICPAKEWAV*GEHPVPGQDYP
Trigger: TGGATAGTCCTGTCCAGGGACAGGATGCTCCCCCAAGACAGCCCACTCTTTTGCTGGGCAAATCCGATACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CAA 72 bp TTCTTCATGGATCGCACCAGCAGGTTGACAGTCTTCTaGGCAGGGTTGCCCACATTGTTGGTGGCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: FFMDRTSRLTVF*AGLPTLLVAVQ
Trigger: CTGCACAGCCACCAACAATGTGGGCAACCCTGCCAAGAAGACTGTCAACCTGCTGGTGCGATCCATGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS TCA 72 bp GGCCAGGCTTCTCATTGTTTACACAAGTACACAGCCTaGGTGAGTGTGGGGCACACCTTCACACAGTCAGAG +
Preference number: 6 (lower is better)
Translates to: GQASHCLHKYTA*VSVGHTFTQSE
Trigger: CTCTGACTGTGTGAAGGTGTGCCCCACACTCACTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS CCA 72 bp TGGAGCAAAGAACACAGACCTCCGTGTCCTACAGCATaGGGCTGTCAAGGAGCATTAGGGGTATCAGGAGTA +
Preference number: 6 (lower is better)
Translates to: WSKEHRPPCPTA*GCQGALGVSGV
Trigger: TACTCCTGATACCCCTAATGCTCCTTGACAGCCCCATGCTGTAGGACACGGAGGTCTGTGTTCTTTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478143.2
CDS CAA 72 bp CGCAGCAGGGTTTCCAAAGAAAACAGTGTGTCCCTGTaGGCAGTACATGACTTGTGGAGGGAGATGAAGGGC +
Preference number: 6 (lower is better)
Translates to: RSRVSKENSVSL*AVHDLWREMKG
Trigger: GCCCTTCATCTCCCTCCACAAGTCATGTACTGCCAACAGGGACACACTGTTTTCTTTGGAAACCCTGCTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CAA 90 bp CCACTCGGGTCTAGCAAACTGGTATCCTTGCTTTTCTTTCAACACTaGAGGGCCAGTTCCTGCCTTAGGGCCTTTGCTTGTGATGTTGCC +
Preference number: 6 (lower is better)
Translates to: PLGSSKLVSLLFFQH*RASSCLRAFACDVA
Trigger: GGCAACATCACAAGCAAAGGCCCTAAGGCAGGAACTGGCCCTCAAGTGTTGAAAGAAAAGCAAGGATACCAGTTTGCTAGACCCGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CAA 90 bp CACGATAGCTTCAGGTCCTGGCCCAGCTGGATGTTCTCACTCTCTTaGATCACGTCAGGAGTGATCTGGAATGTAGCGTTCTTCATGGAC +
Preference number: 6 (lower is better)
Translates to: HDSFRSWPSWMFSLS*ITSGVIWNVAFFMD
Trigger: GTCCATGAAGAACGCTACATTCCAGATCACTCCTGACGTGATCAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS TCA 72 bp GAGTGTGGGGCACACCTTCACACAGTCAGAGCCACATaGTTCCCATCACTCAGACATTCTGAACCCCTATTC +
Preference number: 6 (lower is better)
Translates to: ECGAHLHTVRAT*FPSLRHSEPLF
Trigger: GAATAGGGGTTCAGAATGTCTGAGTGATGGGAATCATGTGGCTCTGACTGTGTGAAGGTGTGCCCCACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS TCA 72 bp AGGCTTCTCATTGTTTACACAAGTACACAGCCTGAGTaGGTGTGGGGCACACCTTCACACAGTCAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: RLLIVYTSTQPE*VWGTPSHSQSH
Trigger: GTGGCTCTGACTGTGTGAAGGTGTGCCCCACACTCACTCAGGCTGTGTACTTGTGTAAACAATGAGAAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505425.5
CDS CCA 72 bp AGTCCCAGATCTTCGACCTACTTCTTAAGCCAGTCCTaGTCCTACAGAGATCCTCCCTTCTGCTGTATCTGG +
Preference number: 6 (lower is better)
Translates to: SPRSSTYFLSQS*SYRDPPFCCIW
Trigger: CCAGATACAGCAGAAGGGAGGATCTCTGTAGGACCAGGACTGGCTTAAGAAGTAGGTCGAAGATCTGGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CAA 72 bp TTCAGGTCCTGGCCCAGCTGGATGTTCTCACTCTCTTaGATCACGTCAGGAGTGATCTGGAATGTAGCGTTC +
Preference number: 6 (lower is better)
Translates to: FRSWPSWMFSLS*ITSGVIWNVAF
Trigger: GAACGCTACATTCCAGATCACTCCTGACGTGATCAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681439.1
ENST00000681472.1
CDS CAA 90 bp CACGATAGCTTCAGGTCCTGGCCCAGCTGGATGTTCTCACTCTCTTaGATCACGTCAGGAGTGATCTGGAATGTAGCGTTCTTCATGGAT +
Preference number: 6 (lower is better)
Translates to: HDSFRSWPSWMFSLS*ITSGVIWNVAFFMD
Trigger: ATCCATGAAGAACGCTACATTCCAGATCACTCCTGACGTGATCAAAGAGAGTGAGAACATCCAGCTGGGCCAGGACCTGAAGCTATCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434837.8
ENST00000478143.2
ENST00000505425.5
ENST00000650466.1
ENST00000681472.1
CDS CAA 72 bp CATTTGCTGCCACTCGGGTCTAGCAAACTGGTATCCTaGCTTTTCTTTCAACACTTGAGGGCCAGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: HLLPLGSSKLVS*LFFQHLRASSC
Trigger: GCAGGAACTGGCCCTCAAGTGTTGAAAGAAAAGCAAGGATACCAGTTTGCTAGACCCGAGTGGCAGCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS GCA 72 bp TTAAGCCAGTCCTGGTCCTACAGAGATCCTCCCTTCTaGTGTATCTGGCCAAAGATTCTAGCATCACAAGGA +
Preference number: 6 (lower is better)
Translates to: LSQSWSYRDPPF*CIWPKILASQG
Trigger: TCCTTGTGATGCTAGAATCTTTGGCCAGATACAGCAGAAGGGAGGATCTCTGTAGGACCAGGACTGGCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS CCA 72 bp ATGTTCTCACTCTCTTTGATCACGTCAGGAGTGATCTaGAATGTAGCGTTCTTCATGGACTGCACGTCCACG +
Preference number: 6 (lower is better)
Translates to: MFSLSLITSGVI*NVAFFMDCTST
Trigger: CGTGGACGTGCAGTCCATGAAGAACGCTACATTCCAGATCACTCCTGACGTGATCAAAGAGAGTGAGAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681439.1
CDS TCA 72 bp AAACACCAGCAAGTGAAAGCTTGCAGGAGGCAGATTTaGACTGCATCTAAGGAAGACCCTGGATGTATCGGA +
Preference number: 6 (lower is better)
Translates to: KHQQVKACRRQI*TASKEDPGCIG
Trigger: TCCGATACATCCAGGGTCTTCCTTAGATGCAGTTCAAATCTGCCTCCTGCAAGCTTTCACTTGCTGGTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CAA 72 bp TCTAGCAAACTGGTATCCTTGCTTTTCTTTCAACACTaGAGGGCCAGTTCCTGCCTTAGGGCCTTTGCTTGT +
Preference number: 6 (lower is better)
Translates to: SSKLVSLLFFQH*RASSCLRAFAC
Trigger: ACAAGCAAAGGCCCTAAGGCAGGAACTGGCCCTCAAGTGTTGAAAGAAAAGCAAGGATACCAGTTTGCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373401.2
CDS CAA 72 bp GAAGCTCCAAGGCATCTTCAACTCAGCATGTCACATTaGTCCATCTCTCCCATTAAACAGGGGCTTCCACAA +
Preference number: 6 (lower is better)
Translates to: EAPRHLQLSMSH*SISPIKQGLPQ
Trigger: TTGTGGAAGCCCCTGTTTAATGGGAGAGATGGACAAATGTGACATGCTGAGTTGAAGATGCCTTGGAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650466.1