Pregenerated sensors for MCUB (Homo sapiens)
Ensembl gene IDs: ENSG00000005059Ensembl transcript IDs: ENST00000394650.7, ENST00000452915.3, ENST00000472310.5, ENST00000494604.1, ENST00000515114.3
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGACCCTTTCACCTCCACATAGAGAATAAACGTGGGACAAGCTaGCAAGGATTTTTAGCTAACAGCAGCCACCGTTGCTTTGATAGA | + |
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Preference number: 1 (lower is better) Translates to: HRPFHLHIENKRGTS*QGFLANSSHRCFDR Trigger: TCTATCAAAGCAACGGTGGCTGCTGTTAGCTAAAAATCCTTGTCAGCTTGTCCCACGTTTATTCTCTATGTGGAGGTGAAAGGGTCTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR-3UTR TCA 90 bp | TACACTGTTTCAGTTGAAGTTCAAAAAGTACCAACTATACTTTATGGTTGGTGGGGCAGGAGGGTTGCTTaGGCCCAGGAGTTTGATTTG | + |
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Preference number: 2 (lower is better) Translates to: YTVSVEVQKVPTILYGWWGRRVA*AQEFDL Trigger: CAAATCAAACTCCTGGGCTCAAGCAACCCTCCTGCC...CCACCAACCATAAAGTATAGTTGGTACTTTTTGAACTTCAACTGAAACAGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR-3UTR GCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAAACAGCAGCCACCGTTaGTTTGATAGACGCATACAA | + |
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Preference number: 2 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTNSSHR*FDRRIQ Trigger: TTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTT...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR-3UTR TCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAAAACGTGGGACAAGCTaGCAAGGATTTTTAGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTKRGTS*QGFLAN Trigger: GTTAGCTAAAAATCCTTGTCAGCTTGTCCCACGTTT...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR-3UTR GCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACACTGAAACTTGTGATTTaGAGGTTCAAAAGCAATCGT | + |
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Preference number: 2 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTLKLVI*RFKSNR Trigger: ACGATTGCTTTTGAACCTGCAAATCACAAGTTTCAG...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR-3UTR CCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAACCAACTATACTTTATaGTTGGTGGAACATTTATGC | + |
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Preference number: 2 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTTNYTL*LVEHLC Trigger: GCATAAATGTTCCACCAACCATAAAGTATAGTTGGT...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR-3UTR CAA 90 bp | TCCAAATTAAGTCTAAGAATGGAAGTGAATGCCAAGCACAGACCCTTTCACCTCGCAGCCACCGTTGCTTaGATAGACGCATACAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SKLSLRMEVNAKHRPFHLAATVA*IDAYKP Trigger: GGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGC...GAGGTGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTTAGACTTAATTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR TCA 72 bp | TTTCACCTCCACATAGAGAATAAACGTGGGACAAGCTaGCAAGGATTTTTAGCTAACAGCAGCCACCGTTGC | + |
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Preference number: 3 (lower is better) Translates to: FHLHIENKRGTS*QGFLANSSHRC Trigger: GCAACGGTGGCTGCTGTTAGCTAAAAATCCTTGTCAGCTTGTCCCACGTTTATTCTCTATGTGGAGGTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR-3UTR CAA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAAGAAAGTTAACTGTTTaGGCTTCGATACCTGAAACT | + |
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Preference number: 3 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTRKLTV*ASIPET Trigger: AGTTTCAGGTATCGAAGCCAAAACAGTTAACTTTCT...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | GGATTTTTAGCTAACAGCAGCCACCGTTGCTTTGATAGACGCATACAAGCCCTTAGTACACCCACCACGTaGGCCAGGCCAGTGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GFLANSSHRCFDRRIQALSTPTT*ARPVPH Trigger: GTGGGGCACTGGCCTGGCTCACGTGGTGGGTGTACT...AAGGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTTAGCTAAAAATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TCCAAATTAAGTCTAAGAATGGAAGTGAATGCCAAGCACAGACCCTTTCACCTCTTCACACGCAAAACCTaGGGCGGAGGCGGCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SKLSLRMEVNAKHRPFHLFTRKT*GGGGSG Trigger: GCCGCTGCCGCCTCCGCCCCAGGTTTTGCGTGTGAA...GAGGTGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTTAGACTTAATTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TCCAAATTAAGTCTAAGAATGGAAGTGAATGCCAAGCACAGACCCTTTCACCTCCGTGAGCCAGGCCAGTaGCCCACCCTGAATGGACAG | + |
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Preference number: 4 (lower is better) Translates to: SKLSLRMEVNAKHRPFHLREPGQ*PTLNGQ Trigger: CTGTCCATTCAGGGTGGGGCACTGGCCTGGCTCACG...GAGGTGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTTAGACTTAATTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | GGATTTTTAGCTAACAGCAGCCACCGTTGCTTTGATAGACGCATACAAGCCCTTCTGAATGGACAGCAGTaGCAATCCAGCCCACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GFLANSSHRCFDRRIQALLNGQQ*QSSPQE Trigger: CTCCTGTGGGCTGGATTGGCACTGCTGTCCATTCAG...AAGGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTTAGCTAAAAATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | ACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATCGGCCAGTGCCCCACCCTaGATGGACAGCAGTGCCAAT | + |
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Preference number: 4 (lower is better) Translates to: TVLASIPETCDLQVQKQSASAPP*MDSSAN Trigger: ATTGGCACTGCTGTCCATTCAGGGTGGGGCACTGGC...CGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAACCTGTTCAAGGGGCTaGAGCTGTTCCTTCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTTCSRG*SCSFRW Trigger: CCACCTGAAGGAACAGCTGCAGCCCCTTGAACAGGT...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | ACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATCGGACAAGACGATTCCGTaGGAGGTTGAGGCAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TVLASIPETCDLQVQKQSDKTIP*EVEAGG Trigger: CCCTCCTGCCTCAACCTCCCACGGAATCGTCTTGTC...CGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TCCAAATTAAGTCTAAGAATGGAAGTGAATGCCAAGCACAGACCCTTTCACCTCTGCAAACAGAGAGAATaGCGCGCCTGTTTCAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: SKLSLRMEVNAKHRPFHLCKQRE*RACFRD Trigger: ATCCCTGAAACAGGCGCGTCATTCTCTCTGTTTGCA...GAGGTGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTTAGACTTAATTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAAGGCAGGAGGGTTGCTTaGGCCCAGGAGTTTGATTTG | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQGRRVA*AQEFDL Trigger: CAAATCAAACTCCTGGGCTCAAGCAACCCTCCTGCC...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | GGATTTTTAGCTAACAGCAGCCACCGTTGCTTTGATAGACGCATACAAGCCCTTTGCTGTGAAGATGGCTaGAGTTTTGATACCCTTATC | + |
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Preference number: 4 (lower is better) Translates to: GFLANSSHRCFDRRIQALCCEDG*SFDTLI Trigger: GATAAGGGTATCAAAACTGCAGCCATCTTCACAGCA...AAGGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTTAGCTAAAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACACCCAGGAGTTTGATTTaGCAAGACCTGGTCTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTPRSLI*QDLVSD Trigger: ATCAGAGACCAGGTCTTGCCAAATCAAACTCCTGGG...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | GGATTTTTAGCTAACAGCAGCCACCGTTGCTTTGATAGACGCATACAAGCCCTTTGTTATTTCATCAGGTaGCACCACGGTACTATAATG | + |
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Preference number: 4 (lower is better) Translates to: GFLANSSHRCFDRRIQALCYFIR*HHGTIM Trigger: CATTATAGTACCGTGGTGCCACCTGATGAAATAACA...AAGGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTTAGCTAAAAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAACCCACAGGAGTCCACTaGTTTTGGCTTCCGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQPTGVH*FWLPNE Trigger: CTCATTCGGAAGCCAAAACCAGTGGACTCCTGTGGG...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | ACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATCGGTTTTGGCTTCCGAATaGGCTTCTATTCCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TVLASIPETCDLQVQKQSVLASE*ASIPAF Trigger: GAAAGCTGGAATAGAAGCTCATTCGGAAGCCAAAAC...CGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACACCTACTCTTAACAGCTaGGTAAGTATAATCCTGTCG | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTPTLNS*VSIILS Trigger: CGACAGGATTATACTTACTCAGCTGTTAAGAGTAGG...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TCCAAATTAAGTCTAAGAATGGAAGTGAATGCCAAGCACAGACCCTTTCACCTCAAACGTGGGACAAGCTaGCAAGGATTTTTAGCTAAC | + |
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Preference number: 4 (lower is better) Translates to: SKLSLRMEVNAKHRPFHLKRGTS*QGFLAN Trigger: GTTAGCTAAAAATCCTTGTCAGCTTGTCCCACGTTT...GAGGTGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTTAGACTTAATTTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | ACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATCGAATCATGTTGCCATCTaGTGTGAAGATGGCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: TVLASIPETCDLQVQKQSNHVAI*CEDGCS Trigger: ACTGCAGCCATCTTCACAGCAGATGGCAACATGATT...CGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | ACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATCGAACAGCAGCCACCGTTaGTTTGATAGACGCATACAA | + |
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Preference number: 4 (lower is better) Translates to: TVLASIPETCDLQVQKQSNSSHR*FDRRIQ Trigger: TTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTT...CGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACATGCTCTCTCTTTTTCTaGGACTCTTCTAAATGCAAG | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTCSLFF*DSSKCK Trigger: CTTGCATTTAGAAGAGTCTCAGAAAAAGAGAGAGCA...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TCCAAATTAAGTCTAAGAATGGAAGTGAATGCCAAGCACAGACCCTTTCACCTCAACTTGTTGTATTGCTaGACATCAAAGTGCTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SKLSLRMEVNAKHRPFHLNLLYC*TSKCCC Trigger: GCAACAGCACTTTGATGTGCAGCAATACAACAAGTT...GAGGTGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTTAGACTTAATTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | GGATTTTTAGCTAACAGCAGCCACCGTTGCTTTGATAGACGCATACAAGCCCTTTTGAGTTCTTCTACTTaGATTTGCAAACAGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: GFLANSSHRCFDRRIQALLSSST*ICKQRE Trigger: TTCTCTCTGTTTGCAAATGCAAGTAGAAGAACTCAA...AAGGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTTAGCTAAAAATCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACATGGTTTTTCTCTCTTTaGACACTGCACATCATATGC | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTWFFSL*TLHIIC Trigger: GCATATGATGTGCAGTGTCCAAAGAGAGAAAAACCA...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAAGCTGTTCCTTCAGGTaGTCAATTTTCTCCAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTSCSFR*SIFSSK Trigger: TTTACTGGAGAAAATTGACCACCTGAAGGAACAGCT...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAAGGAGTCCACTGGTTTTaGCTTCCGAATGAGCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQGVHWF*LPNELL Trigger: TAGAAGCTCATTCGGAAGCCAAAACCAGTGGACTCC...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAGGTTTGACTACGAATTaGCAACGTTCTTTTCTAGAT | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTGLTTN*QRSFLD Trigger: ATCTAGAAAAGAACGTTGTCAATTCGTAGTCAAACC...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAACATCAAGGTAGAAGCTaGAATCATGTTGCCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQHQGRS*NHVAIC Trigger: GCAGATGGCAACATGATTTCAGCTTCTACCTTGATG...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACATTCTTGTGGAAGAACTaGAGAAATTGCCTACTCTTA | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTFLWKN*RNCLLL Trigger: TAAGAGTAGGCAATTTCTTCAGTTCTTCCACAAGAA...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | ACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATCGAGATGGCTGCAGTTTTaGTACCCTTATCTTCATTTT | + |
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Preference number: 4 (lower is better) Translates to: TVLASIPETCDLQVQKQSRWLQF*YPYLHF Trigger: AAAATGAAGATAAGGGTATCAAAACTGCAGCCATCT...CGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TCCAAATTAAGTCTAAGAATGGAAGTGAATGCCAAGCACAGACCCTTTCACCTCTCTCTCTTTGGACACTaGACATCATATGCTATTTTA | + |
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Preference number: 4 (lower is better) Translates to: SKLSLRMEVNAKHRPFHLSLFGH*TSYAIL Trigger: TAAAATAGCATATGATGTGCAGTGTCCAAAGAGAGA...GAGGTGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTTAGACTTAATTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TCCAAATTAAGTCTAAGAATGGAAGTGAATGCCAAGCACAGACCCTTTCACCTCTTTAACTTGTTGTATTaGTGCACATCAAAGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SKLSLRMEVNAKHRPFHLFNLLY*CTSKCC Trigger: ACAGCACTTTGATGTGCAGCAATACAACAAGTTAAA...GAGGTGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTTAGACTTAATTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAAAAGAATGGAAGTGAATaGCAAGCACAGACCCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQKNGSE*QAQTLS Trigger: TGAAAGGGTCTGTGCTTGGCATTCACTTCCATTCTT...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACATCCAGAATTGTTGTATaGCATTCTGAGGATGAAATA | + |
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Preference number: 4 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTSRIVV*HSEDEI Trigger: TATTTCATCCTCAGAATGCCATACAACAATTCTGGA...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TACACTGTTTCAGTTGAAGTTCAAAAAGTACCAACTATACTTTATGGTTGGTGGAACACCTGCAAAATCTaGTTCTGTCAGCATCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: YTVSVEVQKVPTILYGWWNTCKI*FCQHLP Trigger: TGGAAGATGCTGACAGAATCAGATTTTGCAGGTGTT...CCACCAACCATAAAGTATAGTTGGTACTTTTTGAACTTCAACTGAAACAGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATTAGCCACTATAGGTTaGACACCTGCAAAATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQLATIG*TPAKSD Trigger: ATCAGATTTTGCAGGTGTTCAACCTATAGTGGCTAA...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR TCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAAGGTACTATAATGGTGTaGCTGGTAGTATTTCACATT | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQGTIMV*LVVFHI Trigger: AATGTGAAATACTACCAGTCACACCATTATAGTACC...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TACACTGTTTCAGTTGAAGTTCAAAAAGTACCAACTATACTTTATGGTTGGTGGTCCATCTCAGCAGTGTaGTCATTACTTGGTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: YTVSVEVQKVPTILYGWWSISAV*SLLGFS Trigger: AGAAAAACCAAGTAATGAGCACACTGCTGAGATGGA...CCACCAACCATAAAGTATAGTTGGTACTTTTTGAACTTCAACTGAAACAGTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TACACTGTTTCAGTTGAAGTTCAAAAAGTACCAACTATACTTTATGGTTGGTGGTGCTGCACATCAAAGTaGTGTTGCTTTGATTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: YTVSVEVQKVPTILYGWWCCTSK*CCFDFL Trigger: CAAGAAATCAAAGCAACAGCACTTTGATGTGCAGCA...CCACCAACCATAAAGTATAGTTGGTACTTTTTGAACTTCAACTGAAACAGTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAACTGAAACTTGTGATTTaGAGGTTCAAAAGCAATCGT | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQLKLVI*RFKSNR Trigger: ACGATTGCTTTTGAACCTGCAAATCACAAGTTTCAG...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TACACTGTTTCAGTTGAAGTTCAAAAAGTACCAACTATACTTTATGGTTGGTGGACGTTCTTTTCTAGATaGCAAGGTAAGTGTTACCAA | + |
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Preference number: 4 (lower is better) Translates to: YTVSVEVQKVPTILYGWWTFFSR*QGKCYQ Trigger: TTGGTAACACTTACCTTGCCATCTAGAAAAGAACGT...CCACCAACCATAAAGTATAGTTGGTACTTTTTGAACTTCAACTGAAACAGTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CCA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAAACCAACTATACTTTATaGTTGGTGGAACATTTATGC | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCDLQVQKQTNYTL*LVEHLC Trigger: GCATAAATGTTCCACCAACCATAAAGTATAGTTGGT...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| 3UTR CAA 72 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTaGCAGGTTCAAAAGCAATCGTTTATATACACTGTT | + |
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Preference number: 4 (lower is better) Translates to: LTVLASIPETCD*QVQKQSFIYTV Trigger: AACAGTGTATATAAACGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR GCA 90 bp | TACACTGTTTCAGTTGAAGTTCAAAAAGTACCAACTATACTTTATGGTTGGTGGGTTTTGTTAATAATCTaGCAGAGGCTGAAGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTVSVEVQKVPTILYGWWVLLII*QRLKKV Trigger: AACTTTCTTCAGCCTCTGGCAGATTATTAACAAAAC...CCACCAACCATAAAGTATAGTTGGTACTTTTTGAACTTCAACTGAAACAGTGTA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS CCA 90 bp | TCAGCGGCGCATCCTCCCTCAGCCGGGCTCCTCGTCAGCGCCTGGTaGCTCCGAGCTGTGGGCGCTCCCGCCCCGCCTGCTCGCTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SAAHPPSAGLLVSAW*LRAVGAPAPPARSA Trigger: CGCTGAGCGAGCAGGCGGGGCGGGAGCGCCCACAGCTCGGAGCCACCAGGCGCTGACGAGGAGCCCGGCTGAGGGAGGATGCGCCGCTGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000472310.5 ENST00000515114.3 |
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| CDS CCA 90 bp | GCGTCAGCGGCGCATCCTCCCTCAGCCGGGCTCCTCGTCAGCGCCTaGTGGCTCCGAGCTGTGGGCGCTCCCGCCCCGCCTGCTCGCTCA | + |
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Preference number: 5 (lower is better) Translates to: ASAAHPPSAGLLVSA*WLRAVGAPAPPARS Trigger: TGAGCGAGCAGGCGGGGCGGGAGCGCCCACAGCTCGGAGCCACCAGGCGCTGACGAGGAGCCCGGCTGAGGGAGGATGCGCCGCTGACGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000472310.5 ENST00000515114.3 |
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| CDS TCA 90 bp | TCCCAGGAGTACACCCACCACGTGAGCCAGGCCAGTGCCCCACCCTaGATGGACAGCAGTGCCAATCCAGCCCACAGGAGTCCACTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SQEYTHHVSQASAPP*MDSSANPAHRSPLV Trigger: AACCAGTGGACTCCTGTGGGCTGGATTGGCACTGCTGTCCATTCAGGGTGGGGCACTGGCCTGGCTCACGTGGTGGGTGTACTCCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS GCA 90 bp | CCACCACGTGAGCCAGGCCAGTGCCCCACCCTGAATGGACAGCAGTaGCAATCCAGCCCACAGGAGTCCACTGGTTTTGGCTTCCGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PPREPGQCPTLNGQQ*QSSPQESTGFGFRM Trigger: CATTCGGAAGCCAAAACCAGTGGACTCCTGTGGGCTGGATTGGCACTGCTGTCCATTCAGGGTGGGGCACTGGCCTGGCTCACGTGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS TCA 90 bp | AGTGCCAATCCAGCCCACAGGAGTCCACTGGTTTTGGCTTCCGAATaGGCTTCTATTCCAGCTTTCACCTGTTCAAGGGGCTGCAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: SANPAHRSPLVLASE*ASIPAFTCSRGCSC Trigger: ACAGCTGCAGCCCCTTGAACAGGTGAAAGCTGGAATAGAAGCTCATTCGGAAGCCAAAACCAGTGGACTCCTGTGGGCTGGATTGGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS CCA 90 bp | GAATGGACAGCAGTGCCAATCCAGCCCACAGGAGTCCACTGGTTTTaGCTTCCGAATGAGCTTCTATTCCAGCTTTCACCTGTTCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EWTAVPIQPTGVHWF*LPNELLFQLSPVQG Trigger: CCCTTGAACAGGTGAAAGCTGGAATAGAAGCTCATTCGGAAGCCAAAACCAGTGGACTCCTGTGGGCTGGATTGGCACTGCTGTCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CAA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACACGATTCCGTGGGAGGTaGAGGCAGGAGGGTTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTRFRGR*RQEGCL Trigger: CAAGCAACCCTCCTGCCTCAACCTCCCACGGAATCG...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CAA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAGCAGCCACCGTTGCTTaGATAGACGCATACAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTAATVA*IDAYKP Trigger: GGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGC...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CAA 90 bp | GGATTTTTAGCTAACAGCAGCCACCGTTGCTTTGATAGACGCATACAAGCCCTTAGCATTCCAGAATTGTaGTATGGCATTCTGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: GFLANSSHRCFDRRIQALSIPEL*YGILRM Trigger: CATCCTCAGAATGCCATACAACAATTCTGGAATGCT...AAGGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTTAGCTAAAAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CAA 90 bp | GGATTTTTAGCTAACAGCAGCCACCGTTGCTTTGATAGACGCATACAAGCCCTTAGAAAGTTAACTGTTTaGGCTTCGATACCTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GFLANSSHRCFDRRIQALRKLTV*ASIPET Trigger: AGTTTCAGGTATCGAAGCCAAAACAGTTAACTTTCT...AAGGGCTTGTATGCGTCTATCAAAGCAACGGTGGCTGCTGTTAGCTAAAAATCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS TCA 90 bp | AATAACTGTTATTTCATCAGGTGGCACCACGGTACTATAATGGTGTaGCTGGTAGTATTTCACATTTCCACACAGCTTCACACGCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NNCYFIRWHHGTIMV*LVVFHISTQLHTQN Trigger: GTTTTGCGTGTGAAGCTGTGTGGAAATGTGAAATACTACCAGTCACACCATTATAGTACCGTGGTGCCACCTGATGAAATAACAGTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394650.7 ENST00000452915.3 ENST00000472310.5 ENST00000515114.3 |
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| CDS TCA 90 bp | TTCTTTTCATTGAGTTCTTCTACTTGCATTTGCAAACAGAGAGAATaGCGCGCCTGTTTCAGGGATTCTTTAGCCTTAGCAAGGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFSLSSSTCICKQRE*RACFRDSLALARSS Trigger: AGAAGACCTTGCTAAGGCTAAAGAATCCCTGAAACAGGCGCGTCATTCTCTCTGTTTGCAAATGCAAGTAGAAGAACTCAATGAAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS-3UTR CAA 90 bp | TCCATGTTAAGTTCCTACAAACAGTCCAACAGTCATCAGACCCATTCACACACAAAGATGGCTGCAGTTTaGATACCCTTATCTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SMLSSYKQSNSHQTHSHTKMAAV*IPLSSF Trigger: AAATGAAGATAAGGGTATCAAAACTGCAGCCATCTT...TGTGTGTGAATGGGTCTGATGACTGTTGGACTGTTTGTAGGAACTTAACATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CAA 90 bp | ACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATCGCAAAGTGCTGTTGCTTaGATTTCTTGTGGAAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TVLASIPETCDLQVQKQSQSAVA*ISCGRT Trigger: AGTTCTTCCACAAGAAATCAAAGCAACAGCACTTTG...CGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS TCA 90 bp | AAGATGGCTGCAGTTTTGATACCCTTATCTTCATTTTGTAGGTCCTaGAGGAATGAACCAACTGTTGACAACATTGGTTTGACTACGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KMAAVLIPLSSFCRS*RNEPTVDNIGLTTN Trigger: ATTCGTAGTCAAACCAATGTTGTCAACAGTTGGTTCATTCCTTCAGGACCTACAAAATGAAGATAAGGGTATCAAAACTGCAGCCATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000394650.7 ENST00000452915.3 ENST00000472310.5 |
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| CDS GCA 90 bp | AGGGATTCTTTAGCCTTAGCAAGGTCTTCTTTTAACTTGTTGTATTaGTGCACATCAAAGTGCTGTTGCTTTGATTTCTTGTGGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RDSLALARSSFNLLY*CTSKCCCFDFLWKN Trigger: GTTCTTCCACAAGAAATCAAAGCAACAGCACTTTGATGTGCAGCAATACAACAAGTTAAAAGAAGACCTTGCTAAGGCTAAAGAATCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS-3UTR CAA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAACCTGAAACTTGTGATTaGCAGGTTCAAAAGCAATCG | + |
|
Preference number: 5 (lower is better) Translates to: LTVLASIPETCDLQVQKQPETCD*QVQKQS Trigger: CGATTGCTTTTGAACCTGCAAATCACAAGTTTCAGG...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CAA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATTCTTCTACTTGCATTaGCAAACAGAGAGAATGACG | + |
|
Preference number: 5 (lower is better) Translates to: LTVLASIPETCDLQVQKQFFYLH*QTERMT Trigger: CGTCATTCTCTCTGTTTGCAAATGCAAGTAGAAGAA...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS-3UTR CAA 90 bp | TACACTGTTTCAGTTGAAGTTCAAAAAGTACCAACTATACTTTATGGTTGGTGGATCAGCATTCCAGAATaGTTGTATGGCATTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: YTVSVEVQKVPTILYGWWISIPE*LYGILR Trigger: CCTCAGAATGCCATACAACAATTCTGGAATGCTGAT...CCACCAACCATAAAGTATAGTTGGTACTTTTTGAACTTCAACTGAAACAGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS CCA 90 bp | TTAGTCTCATTTAAGATCTGCTGCTCCTTTCAAAAACAGGCAAGCTaGGAAGAGAAATTACACATAATGGGAAAGAAGAAGGAAGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: LVSFKICCSFQKQAS*EEKLHIMGKKKEEI Trigger: TATTTCTTCCTTCTTCTTTCCCATTATGTGTAATTTCTCTTCCCAGCTTGCCTGTTTTTGAAAGGAGCAGCAGATCTTAAATGAGACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000494604.1 |
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| CDS-3UTR CAA 90 bp | TTAACTGTTTTGGCTTCGATACCTGAAACTTGTGATTTGCAGGTTCAAAAGCAATGGTTTGACTACGAATaGACAACGTTCTTTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTVLASIPETCDLQVQKQWFDYE*TTFFSR Trigger: TCTAGAAAAGAACGTTGTCAATTCGTAGTCAAACCA...TTGCTTTTGAACCTGCAAATCACAAGTTTCAGGTATCGAAGCCAAAACAGTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS CCA 72 bp | CATCCTCCCTCAGCCGGGCTCCTCGTCAGCGCCTGGTaGCTCCGAGCTGTGGGCGCTCCCGCCCCGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HPPSAGLLVSAW*LRAVGAPAPPA Trigger: AGCAGGCGGGGCGGGAGCGCCCACAGCTCGGAGCCACCAGGCGCTGACGAGGAGCCCGGCTGAGGGAGGATG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000472310.5 ENST00000515114.3 |
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| CDS TCA 72 bp | CCAGCCCACAGGAGTCCACTGGTTTTGGCTTCCGAATaGGCTTCTATTCCAGCTTTCACCTGTTCAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PAHRSPLVLASE*ASIPAFTCSRG Trigger: GCCCCTTGAACAGGTGAAAGCTGGAATAGAAGCTCATTCGGAAGCCAAAACCAGTGGACTCCTGTGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000394650.7 |
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| CDS CCA 72 bp | TGGACAGCAGTGCCAATCCAGCCCACAGGAGTCCACTaGTTTTGGCTTCCGAATGAGCTTCTATTCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WTAVPIQPTGVH*FWLPNELLFQL Trigger: AAGCTGGAATAGAAGCTCATTCGGAAGCCAAAACCAGTGGACTCCTGTGGGCTGGATTGGCACTGCTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS TCA 72 bp | TATTTCATCAGGTGGCACCACGGTACTATAATGGTGTaGCTGGTAGTATTTCACATTTCCACACAGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: YFIRWHHGTIMV*LVVFHISTQLH Trigger: GTGAAGCTGTGTGGAAATGTGAAATACTACCAGTCACACCATTATAGTACCGTGGTGCCACCTGATGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000394650.7 ENST00000452915.3 ENST00000472310.5 ENST00000515114.3 |
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| CDS TCA 72 bp | TTGAGTTCTTCTACTTGCATTTGCAAACAGAGAGAATaGCGCGCCTGTTTCAGGGATTCTTTAGCCTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSSTCICKQRE*RACFRDSLALA Trigger: TGCTAAGGCTAAAGAATCCCTGAAACAGGCGCGTCATTCTCTCTGTTTGCAAATGCAAGTAGAAGAACTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS CCA 72 bp | TGGTTTGACTACGAATTGACAACGTTCTTTTCTAGATaGCAAGGTAAGTGTTACCAAGGGAAGGCCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: WFDYELTTFFSR*QGKCYQGKAMS Trigger: AGACATGGCCTTCCCTTGGTAACACTTACCTTGCCATCTAGAAAAGAACGTTGTCAATTCGTAGTCAAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394650.7 ENST00000452915.3 ENST00000472310.5 ENST00000515114.3 |
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| CDS CAA 90 bp | TGTTTCAGGGATTCTTTAGCCTTAGCAAGGTCTTCTTTTAACTTGTaGTATTGCTGCACATCAAAGTGCTGTTGCTTTGATTTCTTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CFRDSLALARSSFNL*YCCTSKCCCFDFLW Trigger: CCACAAGAAATCAAAGCAACAGCACTTTGATGTGCAGCAATACAACAAGTTAAAAGAAGACCTTGCTAAGGCTAAAGAATCCCTGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS TCA 72 bp | GAACCAACTGTTGACAACATTGGTTTGACTACGAATTaGCAACGTTCTTTTCTAGATGGCAAGGTAAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: EPTVDNIGLTTN*QRSFLDGKVSV Trigger: AACACTTACCTTGCCATCTAGAAAAGAACGTTGTCAATTCGTAGTCAAACCAATGTTGTCAACAGTTGGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000394650.7 ENST00000452915.3 ENST00000472310.5 ENST00000515114.3 |
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| CDS TCA 72 bp | CTTGTTGTATTGCTGCACATCAAAGTGCTGTTGCTTTaGTTTCTTGTGGAAGAACTGAAGAAATTGCCTACT | + |
|
Preference number: 6 (lower is better) Translates to: LVVLLHIKVLLL*FLVEELKKLPT Trigger: AGTAGGCAATTTCTTCAGTTCTTCCACAAGAAATCAAAGCAACAGCACTTTGATGTGCAGCAATACAACAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS CAA 72 bp | ACTTGTTGTATTGCTGCACATCAAAGTGCTGTTGCTTaGATTTCTTGTGGAAGAACTGAAGAAATTGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: TCCIAAHQSAVA*ISCGRTEEIAY Trigger: GTAGGCAATTTCTTCAGTTCTTCCACAAGAAATCAAAGCAACAGCACTTTGATGTGCAGCAATACAACAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS CAA 72 bp | AGGGATTCTTTAGCCTTAGCAAGGTCTTCTTTTAACTaGTTGTATTGCTGCACATCAAAGTGCTGTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RDSLALARSSFN*LYCCTSKCCCF Trigger: AAAGCAACAGCACTTTGATGTGCAGCAATACAACAAGTTAAAAGAAGACCTTGCTAAGGCTAAAGAATCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS GCA 72 bp | TTAGCCTTAGCAAGGTCTTCTTTTAACTTGTTGTATTaGTGCACATCAAAGTGCTGTTGCTTTGATTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LALARSSFNLLY*CTSKCCCFDFL Trigger: CAAGAAATCAAAGCAACAGCACTTTGATGTGCAGCAATACAACAAGTTAAAAGAAGACCTTGCTAAGGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS CAA 72 bp | GATTCTTTAGCCTTAGCAAGGTCTTCTTTTAACTTGTaGTATTGCTGCACATCAAAGTGCTGTTGCTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: DSLALARSSFNL*YCCTSKCCCFD Trigger: ATCAAAGCAACAGCACTTTGATGTGCAGCAATACAACAAGTTAAAAGAAGACCTTGCTAAGGCTAAAGAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000494604.1 |
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| CDS CCA 72 bp | ATAAATGAGGGCACAGAGAACACATATTTATCCCAATaGAGGAATTTGTGTGTTACACTAATTACTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: INEGTENTYLSQ*RNLCVTLITSP Trigger: TGGAGAAGTAATTAGTGTAACACACAAATTCCTCCATTGGGATAAATATGTGTTCTCTGTGCCCTCATTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494604.1 |
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| CDS TCA 72 bp | TCAATTTTCTCCAGTAAATGGTGCTCTCTCTTTTTCTaGGACTCTTCTAAATGCAAGATTGTAAATAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SIFSSKWCSLFF*DSSKCKIVNSL Trigger: CAGACTATTTACAATCTTGCATTTAGAAGAGTCTCAGAAAAAGAGAGAGCACCATTTACTGGAGAAAATTGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000394650.7 ENST00000472310.5 |
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