RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCU (Homo sapiens)

Ensembl gene IDs: ENSG00000156026

Ensembl transcript IDs: ENST00000357157.10, ENST00000373053.7, ENST00000483185.1, ENST00000536019.5, ENST00000603118.5, ENST00000603649.5, ENST00000604152.1, ENST00000604372.5, ENST00000604679.5, ENST00000605597.5

Found 559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGGGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATaGACAAAGCCTCCAGACAAGGCAGTCCCATCTGGCTGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: GGRAHKQCGSVCPSR*TKPPDKAVPSGWPG
Trigger: TCCAGGCCAGCCAGATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CCA 90 bp GATTTACAACTGAAGTTGTGGAGGTGGGAGGGCTCACAAACAGTGTaGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGC +
Preference number: 1 (lower is better)
Translates to: DLQLKLWRWEGSQTV*KCVSFEMNKASRQG
Trigger: GCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR TCA 90 bp CGTAAAAATACACCAACAGAGTCAGAGATAGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGATGGTAGCCTCACAGATATCACAGGT +
Preference number: 1 (lower is better)
Translates to: RKNTPTESEIGLSVN*QRSRRDGSLTDITG
Trigger: ACCTGTGATATCTGTGAGGCTACCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTTGGTGTATTTTTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR CCA 90 bp GTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATCTaGCTGGCCTGGAATGCTGTCACACAAAGCAGATTAGCAATAAAA +
Preference number: 1 (lower is better)
Translates to: VSFEMNKASRQGSPI*LAWNAVTQSRLAIK
Trigger: TTTTATTGCTAATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CCA 90 bp CCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTaGGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATG +
Preference number: 1 (lower is better)
Translates to: PFEIHTLDLQLKLWR*EGSQTVWKCVSFEM
Trigger: CATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CCA 90 bp ATTGCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTaGAGGTGGGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTC +
Preference number: 1 (lower is better)
Translates to: IAPFEIHTLDLQLKL*RWEGSQTVWKCVSF
Trigger: GAAGGACACACACTTCCACACTGTTTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CCA 90 bp GAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGCAGATTAGCAATAAAATTATTCTGG +
Preference number: 1 (lower is better)
Translates to: EMNKASRQGSPIWLA*NAVTQSRLAIKLFW
Trigger: CCAGAATAATTTTATTGCTAATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR GCA 90 bp GAACAAAGCCTCCAGACAAGGCAGTCCCATCTGGCTGGCCTGGAATaGTGTCACACAAAGCAGATTAGCAATAAAATTATTCTGGTTGAA +
Preference number: 1 (lower is better)
Translates to: EQSLQTRQSHLAGLE*CHTKQISNKIILVE
Trigger: TTCAACCAGAATAATTTTATTGCTAATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTGTCTGGAGGCTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR GCA 90 bp AGATCCTCTAGTCTTTCAATAAGCTCCCTTTCCTTGTTTAACTGGTaGTGCTCAATGCACAGTGTGGTGTATAGTTGCTGGACCAATGTC +
Preference number: 1 (lower is better)
Translates to: RSSSLSISSLSLFNW*CSMHSVVYSCWTNV
Trigger: GACATTGGTCCAGCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGAAAGACTAGAGGATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR GCA 90 bp TCCTCTAGTCTTTCAATAAGCTCCCTTTCCTTGTTTAACTGGTGCTaGTCAATGCACAGTGTGGTGTATAGTTGCTGGACCAATGTCTTT +
Preference number: 1 (lower is better)
Translates to: SSSLSISSLSLFNWC*SMHSVVYSCWTNVF
Trigger: AAAGACATTGGTCCAGCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGAAAGACTAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR CCA 90 bp TTGAGATCCTCTAGTCTTTCAATAAGCTCCCTTTCCTTGTTTAACTaGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGCTGGACCAAT +
Preference number: 1 (lower is better)
Translates to: LRSSSLSISSLSLFN*CCSMHSVVYSCWTN
Trigger: ATTGGTCCAGCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGAAAGACTAGAGGATCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGCACCCCCTTTCCCTCTaGTTTGTGTTCTGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMHPLSL*FVFWRE
Trigger: CTCCCTCCAGAACACAAATCAGAGGGAAAGGGGGTG...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGAT +
Preference number: 2 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVGLSVN*QRSRRD
Trigger: ATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCC...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR CCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGGAAAAGGCCAATCAGTaGTGTGGCAGCCCCCATCAT +
Preference number: 2 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMEKANQ*CGSPHH
Trigger: ATGATGGGGGCTGCCACACCACTGATTGGCCTTTTC...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CAA 90 bp TGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTaGGCAGGAGTAGCAGCAGCAGCAGCAATCCTGGCTGGCCTTCAA +
Preference number: 2 (lower is better)
Translates to: WRHASFHSVMPMKGV*AGVAAAAAILAGLQ
Trigger: TTGAAGGCCAGCCAGGATTGCTGCTGCTGCTGCTACTCCTGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTCACCCCCTTTCCCTCTaGTTTGTGTTCTGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVHPLSL*FVFWRE
Trigger: CTCCCTCCAGAACACAAATCAGAGGGAAAGGGGGTG...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGAACAGGTGTTCCTTCTaGCAGGATTCAGAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLNRCSF*QDSEAF
Trigger: AAAAGCCTCTGAATCCTGGCAGAAGGAACACCTGTT...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGCTGGCTGGCCTGGAATaGTGTCACACAAAGCAGATT +
Preference number: 2 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMLAGLE*CHTKQI
Trigger: AATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAG...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp AACAGAGTCAGAGATAGGCTTGAGTGTGAACTGACAGCGTTCACGCCGGGATGGACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 2 (lower is better)
Translates to: NRVRDRLECELTAFTPGWTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...CCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTCCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGC +
Preference number: 2 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVPIWLA*NAVTQS
Trigger: GCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGG...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGGAGCCAGCTGCTCTTTaGGATCCTCTAGTCTTTCAA +
Preference number: 2 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMEPAAL*DPLVFQ
Trigger: TTGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTC...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR TCA 90 bp CAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTCACATCACCAATACTTaGCTCCCACAGGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: QQCCNKQLPNSARKRSSGHITNT*LPQASS
Trigger: GGAGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTG...ACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604679.5
3UTR-3UTR GCA 90 bp CAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTCAACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 2 (lower is better)
Translates to: QILPGSDPLVYPGCKCWSTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...TGACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
3UTR-3UTR CCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGTCAGTAAAGGGATGCTaGAAGGAAAGATTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLSVKGC*KERFLV
Trigger: TACCAGGAATCTTTCCTTCCAGCATCCCTTTACTGA...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGCCTTTGCAAGGCACCTaGAGTCTGGGTTTGTCATTT +
Preference number: 2 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMPLQGT*SLGLSF
Trigger: AAATGACAAACCCAGACTCCAGGTGCCTTGCAAAGG...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTAGCAGCAATCCTGGCTaGCCTTCAACCTTTGCAAGG +
Preference number: 2 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVSSNPG*PSTFAR
Trigger: CCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCT...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTGTGTGTCCTTCGAGATaGACAAAGCCTCCAGACAAG +
Preference number: 2 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVVCPSR*TKPPDK
Trigger: CTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACAC...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAGACACAGATTCCTTTaGCTCTTCAAGCGCAGATGT +
Preference number: 2 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMRHRFL*LFKRRC
Trigger: ACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCT...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp TCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGCGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGAT +
Preference number: 2 (lower is better)
Translates to: SLSLFNWCCSMHSVVYSCGLSVN*QRSRRD
Trigger: ATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCC...GCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp AGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGAT +
Preference number: 2 (lower is better)
Translates to: SSLSLFNWCCSMHSVVYSGLSVN*QRSRRD
Trigger: ATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCC...ACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCTGGCTGGCCTGGAATaGTGTCACACAAAGCAGATT +
Preference number: 2 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLLAGLE*CHTKQI
Trigger: AATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAG...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp AGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SAAINSSQILPGSDPLVYTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...GTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603649.5
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp AGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCCAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: RAQQCCNKQLPNSARKRSQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...GGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAGGCCAATCAGTGGTGTaGCAGCCCCCATCATCCTTT +
Preference number: 2 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAGQSVV*QPPSSF
Trigger: AAAGGATGATGGGGGCTGCCACACCACTGATTGGCC...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACAGCAGCAGCAATCCTaGCTGGCCTTCAACCTTTGC +
Preference number: 2 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAQQQQS*LAFNLC
Trigger: GCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCCAGGAAGCGATCCTCTaGTGTACCTGCGAATGTTCA +
Preference number: 2 (lower is better)
Translates to: RAQQCCNKQLPNSARKRSQEAIL*CTCECS
Trigger: TGAACATTCGCAGGTACACCAGAGGATCGCTTCCTG...GGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604679.5
3UTR-3UTR GCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGCTGGCCTTCAACCTTTaGAAGGCACCTGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQLAFNL*KAPGVW
Trigger: CCAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAG...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp AGCGTTCACGCCGGGATGGTAGCCTCACAGATATCACAGGTAACCCATTTTGATCAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: SVHAGMVASQISQVTHFDQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...ATCAAAATGGGTTACCTGTGATATCTGTGAGGCTACCATCCCGGCGTGAACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGCCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGC +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQPIWLA*NAVTQS
Trigger: GCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGG...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAAGCAGCAATCCTGGCTaGCCTTCAACCTTTGCAAGG +
Preference number: 2 (lower is better)
Translates to: KWRHASFHSVMPMKGVLASSNPG*PSTFAR
Trigger: CCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCT...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGGAAGCGATCCTCTaGTGTACCATATTCGCTTCT +
Preference number: 2 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLQEAIL*CTIFAS
Trigger: AGAAGCGAATATGGTACACCAGAGGATCGCTTCCTG...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGTGTGTCCTTCGAGATaGACAAAGCCTCCAGACAAG +
Preference number: 2 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEVCPSR*TKPPDK
Trigger: CTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACAC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGATTCCGTCATGCCAATaGAAGGGGTGTTGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQIPSCQ*KGCWQE
Trigger: CTCCTGCCAACACCCCTTTCATTGGCATGACGGAAT...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGCTCCCAGCTTCCACCTaGAATGCTTTAATTAAAAAG +
Preference number: 2 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMLPAST*NALIKK
Trigger: CTTTTTAATTAAAGCATTGCAGGTGGAAGCTGGGAG...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp TCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGCACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 2 (lower is better)
Translates to: SLSLFNWCCSMHSVVYSCTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...GCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp AGCGTTCACGCCGGGATGGTAGCCTCACAGATATCACAGGTAACCCATTTTGATTGTTCAAGTTTCCCCTaGGTGAACAGGTCACATCAC +
Preference number: 2 (lower is better)
Translates to: SVHAGMVASQISQVTHFDCSSFP*VNRSHH
Trigger: GTGATGTGACCTGTTCACGCAGGGGAAACTTGAACA...ATCAAAATGGGTTACCTGTGATATCTGTGAGGCTACCATCCCGGCGTGAACGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604679.5
3UTR-3UTR CCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGAGTCGAGTGGGGTGCTaGTGTGTTACTCTTTTGCTG +
Preference number: 2 (lower is better)
Translates to: APFEIHTLDLQLKLWRWESRVGC*CVTLLL
Trigger: CAGCAAAAGAGTAACACACCAGCACCCCACTCGACT...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTCAAGGCAGTCCCATCTaGCTGGCCTGGAATGCTGTC +
Preference number: 2 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPQGSPI*LAWNAV
Trigger: GACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTG...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGGAAAAGGCCAATCAGTaGTGTGGCAGCCCCCATCAT +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQEKANQ*CGSPHH
Trigger: ATGATGGGGGCTGCCACACCACTGATTGGCCTTTTC...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCGTGTTACTCTTTTGCTaGCTCTGCAAAGAAGATGCA +
Preference number: 2 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLVLLFC*LCKEDA
Trigger: TGCATCTTCTTTGCAGAGTCAGCAAAAGAGTAACAC...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATGTGATTTTTAGACACTaGTCCAGAGCACTGGGATAT +
Preference number: 2 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHVIFRH*SRALGY
Trigger: ATATCCCAGTGCTCTGGATCAGTGTCTAAAAATCAC...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCAGACACAGATTCCTTTaGCTCTTCAAGCGCAGATGT +
Preference number: 2 (lower is better)
Translates to: SLASHTPQKDLLVALCCFRHRFL*LFKRRC
Trigger: ACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCT...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGTCTTTTCATACACAATaGTCCCAAAGGAGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMSFHTQ*SQRRKK
Trigger: TTTCTTCCTCCTTTGGGATCATTGTGTATGAAAAGA...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGCGAACACCATCTGGTaGATAGATAGCAACTCTGTC +
Preference number: 2 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEANTIW*IDSNSV
Trigger: GACAGAGTTGCTATCTATTCACCAGATGGTGTTCGC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR GCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAAACAGGTGTTCCTTCTaGCAGGATTCAGAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPNRCSF*QDSEAF
Trigger: AAAAGCCTCTGAATCCTGGCAGAAGGAACACCTGTT...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGCTGGCTGGCCTGGAATaGTGTCACACAAAGCAGATT +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQLAGLE*CHTKQI
Trigger: AATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAG...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp CCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTTATAACAGAACCATCTaGGAATGTTCAAGTTTCCCC +
Preference number: 2 (lower is better)
Translates to: PKFCQEAILWCTQDASVGYNRTI*ECSSFP
Trigger: GGGGAAACTTGAACATTCGCAGATGGTTCTGTTATA...ACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
3UTR-3UTR CCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGACAAATAGAGTCGAGTaGGGTGCTGGTGTGTTACTC +
Preference number: 2 (lower is better)
Translates to: APFEIHTLDLQLKLWRWETNRVE*GAGVLL
Trigger: GAGTAACACACCAGCACCCCACTCGACTCTATTTGT...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCAGTAAAGGGATGCTaGAAGGAAAGATTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVSVKGC*KERFLV
Trigger: TACCAGGAATCTTTCCTTCCAGCATCCCTTTACTGA...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCAAGGCAGTCCCATCTaGCTGGCCTGGAATGCTGTC +
Preference number: 2 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHQGSPI*LAWNAV
Trigger: GACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCATTACAACTGAAGTTGTaGAGGTGGGAGGGCTCACAA +
Preference number: 2 (lower is better)
Translates to: KWRHASFHSVMPMKGVLALQLKL*RWEGSQ
Trigger: TTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAA...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACCTTTGCAAGGCACCTaGAGTCTGGGTTTGTCATTT +
Preference number: 2 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAPLQGT*SLGLSF
Trigger: AAATGACAAACCCAGACTCCAGGTGCCTTGCAAAGG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGAAATGCCAAACTGTGTaGCCATGTAGGCAAGGCCAC +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQKCQTV*PCRQGH
Trigger: GTGGCCTTGCCTACATGGCCACACAGTTTGGCATTT...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR TCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTAACCTTACATCTTCCTaGTTTGGTAGTACAGCTGAA +
Preference number: 2 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVNLTSS*FGSTAE
Trigger: TTCAGCTGTACTACCAAATCAGGAAGATGTAAGGTT...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp ATAAACCACTGTAACATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAGTTTCCCCTGCGTaGACAGGTCACATCACCAAT +
Preference number: 2 (lower is better)
Translates to: INHCNIIRGHNSAAINSSQVSPA*TGHITN
Trigger: ATTGGTGATGTGACCTGTTCACGCAGGGGAAACTTG...GGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATGTTACAGTGGTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
3UTR-3UTR GCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAAACAGGTGTTCCTTCTaGCAGGATTCAGAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: KWRHASFHSVMPMKGVLANRCSF*QDSEAF
Trigger: AAAAGCCTCTGAATCCTGGCAGAAGGAACACCTGTT...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCTGGCCTTCAACCTTTaGAAGGCACCTGGAGTCTGG +
Preference number: 2 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHLAFNL*KAPGVW
Trigger: CCAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGACAAATAGAGTCGAGTaGGGTGCTGGTGTGTTACTC +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQTNRVE*GAGVLL
Trigger: GAGTAACACACCAGCACCCCACTCGACTCTATTTGT...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCAGCAGCAGCAATCCTaGCTGGCCTTCAACCTTTGC +
Preference number: 2 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHQQQQS*LAFNLC
Trigger: GCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp CTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCGAGGTCTATTCCTGTTaGAGCAGCAACGCGAACACC +
Preference number: 2 (lower is better)
Translates to: LKRSLFGGRTWYVKSLMTEVYSC*SSNANT
Trigger: GGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTC...GGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGCAGGAAGTGGAGACATaGATCCTTTCATTCCGTCAT +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQQEVET*ILSFRH
Trigger: ATGACGGAATGAAAGGATGCATGTCTCCACTTCCTG...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACATGTCCTCCCTCCCTTaGTTCCCACACACCCCAAAA +
Preference number: 2 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHMSSLP*FPHTPK
Trigger: TTTTGGGGTGTGTGGGAAGCAAGGGAGGGAGGACAT...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp TCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATAGGCTTGCAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 2 (lower is better)
Translates to: SSSCSCRKNTPTESEIGLQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...CAAGCCTATCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp TCAATAAGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGACTGGTGCTGCTCAATaGACAGTGTGGTGTATAGTT +
Preference number: 2 (lower is better)
Translates to: SISSLSLFNWCCSMHSVVTGAAQ*TVWCIV
Trigger: AACTATACACCACACTGTGCATTGAGCAGCACCAGT...CACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp AGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTTGTTTAACTGGTGCTaGTCAATGCACAGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: SSLSLFNWCCSMHSVVYSLFNWC*SMHSVV
Trigger: CACCACACTGTGCATTGAGCAGCACCAGTTAAACAA...ACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp TCAATAAGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTTGTTTAACTGGTGCTaGTCAATGCACAGTGTGGTG +
Preference number: 2 (lower is better)
Translates to: SISSLSLFNWCCSMHSVVLFNWC*SMHSVV
Trigger: CACCACACTGTGCATTGAGCAGCACCAGTTAAACAA...CACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp CTCTGTCAATTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGATCCTCTGGTGTACCTaGGAATGTTCAAGTTTCCCC +
Preference number: 2 (lower is better)
Translates to: LCQFPDPLLAVVVKIHQQILWCT*ECSSFP
Trigger: GGGGAAACTTGAACATTCGCAGGTACACCAGAGGAT...CTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAATTGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604679.5
3UTR-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTCCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGC +
Preference number: 2 (lower is better)
Translates to: QRRCKKRTPPALFSLYESPIWLA*NAVTQS
Trigger: GCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGG...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTGGCTCACAAACAGTGTaGAAGTGTGTGTCCTTCGAG +
Preference number: 2 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPGSQTV*KCVSFE
Trigger: CTCGAAGGACACACACTTCCACACTGTTTGTGAGCC...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp GTGTGGTGTATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATGCTCAATGCACAGTGTaGTGTATAGTTGCTGGACCA +
Preference number: 2 (lower is better)
Translates to: VWCIVAGPMSLHHSALLHAQCTV*CIVAGP
Trigger: TGGTCCAGCAACTATACACCACACTGTGCATTGAGC...ATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATACACCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACTTTCCTTGTTTAACTaGTGCTGCTCAATGCACAGT +
Preference number: 2 (lower is better)
Translates to: KWRHASFHSVMPMKGVLALSLFN*CCSMHS
Trigger: ACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR CAA 90 bp AGCTGCTCTTTGAGATCCTCTAGTCTTTCAATAAGCTCCCTTTCCTaGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGC +
Preference number: 2 (lower is better)
Translates to: SCSLRSSSLSISSLS*FNWCCSMHSVVYSC
Trigger: GCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGAAAGACTAGAGGATCTCAAAGAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR CAA 90 bp CTGCTAATCTCAATTCGTACCTTTTCCAGGGGAGCCAGCTGCTCTTaGAGATCCTCTAGTCTTTCAATAAGCTCCCTTTCCTTGTTTAAC +
Preference number: 2 (lower is better)
Translates to: LLISIRTFSRGASCS*RSSSLSISSLSLFN
Trigger: GTTAAACAAGGAAAGGGAGCTTATTGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTCCCCTGGAAAAGGTACGAATTGAGATTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTTCTTAAAAACCCTATaGACAAACAGGATAAATGGG +
Preference number: 2 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVFLKTL*TNRING
Trigger: CCCATTTATCCTGTTTGTGCATAGGGTTTTTAAGAA...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGTCAGTAAAGGGATGCTaGAAGGAAAGATTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQSVKGC*KERFLV
Trigger: TACCAGGAATCTTTCCTTCCAGCATCCCTTTACTGA...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGGCCAATCAGTGGTGTaGCAGCCCCCATCATCCTTT +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDGQSVV*QPPSSF
Trigger: AAAGGATGATGGGGGCTGCCACACCACTGATTGGCC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CAA 90 bp GTTGGTCATAATCCTTCTTTCCTAATAAGCATAAAGGGCCAACCCTaGGTCTCTGGGGGATATAACAGAACCATCTGCGAATGTTCAAGT +
Preference number: 2 (lower is better)
Translates to: VGHNPSFLISIKGQP*VSGGYNRTICECSS
Trigger: ACTTGAACATTCGCAGATGGTTCTGTTATATCCCCCAGAGACCAAGGGTTGGCCCTTTATGCTTATTAGGAAAGAAGGATTATGACCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603649.5
3UTR-3UTR GCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGAAACCAACAACCTCATaGAGTGTTGCCAGTGATTTT +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQKPTTS*SVASDF
Trigger: AAAATCACTGGCAACACTGCATGAGGTTGTTGGTTT...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACATGTCCTCCCTCCCTTaGTTCCCACACACCCCAAAA +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDMSSLP*FPHTPK
Trigger: TTTTGGGGTGTGTGGGAAGCAAGGGAGGGAGGACAT...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGATTCAGAGGCTTTTTaGAGATCAATCTTTTTCACC +
Preference number: 2 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEDSEAF*RSIFFT
Trigger: GGTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAAGCGCAGATGTCATCTaGAAATATGGTAGAAAATGT +
Preference number: 2 (lower is better)
Translates to: KWRHASFHSVMPMKGVLASADVI*KYGRKC
Trigger: ACATTTTCTACCATATTTCCAGATGACATCTGCGCT...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGAAAAGGCCAATCAGTaGTGTGGCAGCCCCCATCAT +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDEKANQ*CGSPHH
Trigger: ATGATGGGGGCTGCCACACCACTGATTGGCCTTTTC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CAA 90 bp GTGTGGTGTATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTaGCTGCATTTTCATGACTTAAGAGGTCTCTTTTTGGTGGTCGTA +
Preference number: 2 (lower is better)
Translates to: VWCIVAGPMSLHHSA*LHFHDLRGLFLVVV
Trigger: TACGACCACCAAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATACACCACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGTGTGTCCTTCGAGATaGACAAAGCCTCCAGACAAG +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDVCPSR*TKPPDK
Trigger: CTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACAC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp TCAATAAGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGGTTGCTGCATTTTCATaGCTTAAGAGGTCTCTTTTT +
Preference number: 2 (lower is better)
Translates to: SISSLSLFNWCCSMHSVVVAAFS*LKRSLF
Trigger: AAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAAC...CACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp AGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCTTAAACAGGTGTTCCTTCTaGCAGGATTCAGAGGCTTTT +
Preference number: 2 (lower is better)
Translates to: RSLFGGRTWYVKSLMTSLNRCSF*QDSEAF
Trigger: AAAAGCCTCTGAATCCTGGCAGAAGGAACACCTGTT...TAAGCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR GCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCAGGAAGTGGAGACATaGATCCTTTCATTCCGTCAT +
Preference number: 2 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHQEVET*ILSFRH
Trigger: ATGACGGAATGAAAGGATGCATGTCTCCACTTCCTG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp CATTCAGCGTTGCTGCATTTTCATGACTTAAGAGGTCTCTTTTTGGTGGTCGTACCCCGATCCTCTTCTTaGAGTTGTCGTAAAAATACA +
Preference number: 2 (lower is better)
Translates to: HSALLHFHDLRGLFLVVVPRSSS*SCRKNT
Trigger: TGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG...TACGACCACCAAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAACGCTGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGAGTCGAGTGGGGTGCTaGTGTGTTACTCTTTTGCTG +
Preference number: 2 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKSRVGC*CVTLLL
Trigger: CAGCAAAAGAGTAACACACCAGCACCCCACTCGACT...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAGTCGAGTGGGGTGCTaGTGTGTTACTCTTTTGCTG +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDSRVGC*CVTLLL
Trigger: CAGCAAAAGAGTAACACACCAGCACCCCACTCGACT...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGGCTCACAAACAGTGTaGAAGTGTGTGTCCTTCGAG +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDGSQTV*KCVSFE
Trigger: CTCGAAGGACACACACTTCCACACTGTTTGTGAGCC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTAACCTTACATCTTCCTaGTTTGGTAGTACAGCTGAA +
Preference number: 2 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPNLTSS*FGSTAE
Trigger: TTCAGCTGTACTACCAAATCAGGAAGATGTAAGGTT...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGTTCTTAAAAACCCTATaGACAAACAGGATAAATGGG +
Preference number: 2 (lower is better)
Translates to: TMRKDESRERKGQSVVWQFLKTL*TNRING
Trigger: CCCATTTATCCTGTTTGTGCATAGGGTTTTTAAGAA...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCCCCGATCCTCTTCTTaGAGTTGTCGTAAAAATACA +
Preference number: 2 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHPRSSS*SCRKNT
Trigger: TGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR CCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGCCCATAGCACCAAAGTaGTCCTCTTCTCAGCTTTTC +
Preference number: 2 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKPIAPK*SSSQLF
Trigger: GAAAAGCTGAGAAGAGGACCACTTTGGTGCTATGGG...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR CCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCTCTGTCTCTGGCTTCTaGATAAACATATTCCTGGCG +
Preference number: 2 (lower is better)
Translates to: KNRILDTDSFDSSSADVISVSGF*INIFLA
Trigger: CGCCAGGAATATGTTTATCCAGAAGCCAGAGACAGA...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR TCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTGTGTTACTCTTTTGCTaGCTCTGCAAAGAAGATGCA +
Preference number: 2 (lower is better)
Translates to: QRRCKKRTPPALFSLYESVLLFC*LCKEDA
Trigger: TGCATCTTCTTTGCAGAGTCAGCAAAAGAGTAACAC...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp CATTCAGCGTTGCTGCATTTTCATGACTTAAGAGGTCTCTTTTTGGTGGTCGTATTTGGTGGTCGTACGTaGTATGTTAAGTCATTAATG +
Preference number: 2 (lower is better)
Translates to: HSALLHFHDLRGLFLVVVFGGRT*YVKSLM
Trigger: CATTAATGACTTAACATACCACGTACGACCACCAAA...TACGACCACCAAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAACGCTGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGGTGTTACTCTTTTGCTaGCTCTGCAAAGAAGATGCA +
Preference number: 2 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKVLLFC*LCKEDA
Trigger: TGCATCTTCTTTGCAGAGTCAGCAAAAGAGTAACAC...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGTGTTACTCTTTTGCTaGCTCTGCAAAGAAGATGCA +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDVLLFC*LCKEDA
Trigger: TGCATCTTCTTTGCAGAGTCAGCAAAAGAGTAACAC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR TCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTAACCTTACATCTTCCTaGTTTGGTAGTACAGCTGAA +
Preference number: 2 (lower is better)
Translates to: QRRCKKRTPPALFSLYESNLTSS*FGSTAE
Trigger: TTCAGCTGTACTACCAAATCAGGAAGATGTAAGGTT...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCAAACCAACAACCTCATaGAGTGTTGCCAGTGATTTT +
Preference number: 2 (lower is better)
Translates to: KNRILDTDSFDSSSADVIKPTTS*SVASDF
Trigger: AAAATCACTGGCAACACTGCATGAGGTTGTTGGTTT...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp GTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATTTTCATGACTTATTTGGTGGTCGTACGTaGTATGTTAAGTCATTAATG +
Preference number: 2 (lower is better)
Translates to: VAGPMSLHHSALLHFHDLFGGRT*YVKSLM
Trigger: CATTAATGACTTAACATACCACGTACGACCACCAAA...TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR CCA 90 bp TTTCATGACTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATGTGGTGTATAGTTGCTaGACCAATGTCTTTACATCA +
Preference number: 2 (lower is better)
Translates to: FHDLRGLFLVVVRGMLSHVVYSC*TNVFTS
Trigger: TGATGTAAAGACATTGGTCCAGCAACTATACACCAC...ATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTTAAGTCATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAACCAACAACCTCATaGAGTGTTGCCAGTGATTTT +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDKPTTS*SVASDF
Trigger: AAAATCACTGGCAACACTGCATGAGGTTGTTGGTTT...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR GCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACTTCTTAAAAACCCTATaGACAAACAGGATAAATGGG +
Preference number: 2 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDFLKTL*TNRING
Trigger: CCCATTTATCCTGTTTGTGCATAGGGTTTTTAAGAA...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGGCTGGCCTTCAACCTTaGCAAGGCACCTGGAGTCTG +
Preference number: 3 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMAGLQP*QGTWSL
Trigger: CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGC...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGGATTTACAACTGAAGTaGTGGAGGTGGGAGGGCTCA +
Preference number: 3 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMDLQLK*WRWEGS
Trigger: TGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATC...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCGCTGGCCTTCAACCTTaGCAAGGCACCTGGAGTCTG +
Preference number: 3 (lower is better)
Translates to: SLASHTPQKDLLVALCCFAGLQP*QGTWSL
Trigger: CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGC...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR TCA 72 bp GCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATaGACAAAGCCTCCAGACAAGGCAGTCCCATCTGGC +
Preference number: 3 (lower is better)
Translates to: AHKQCGSVCPSR*TKPPDKAVPSG
Trigger: GCCAGATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR TCA 72 bp ACACCAACAGAGTCAGAGATAGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGATGGTAGCCTCACAGAT +
Preference number: 3 (lower is better)
Translates to: TPTESEIGLSVN*QRSRRDGSLTD
Trigger: ATCTGTGAGGCTACCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTTGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR GCA 72 bp AGAAGGAAGTGGGCGGAGGGTCAGGAAGTGGAGACATaGATCCTTTCATTCCGTCATGCCAATGAAAGGGGT +
Preference number: 3 (lower is better)
Translates to: RRKWAEGQEVET*ILSFRHANERG
Trigger: ACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCCACTTCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCCCCTTTCCCTCTGATTaGTGTTCTGGAGGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: SLASHTPQKDLLVALCCFPFPSD*CSGGRG
Trigger: CCCTCTCCCTCCAGAACACAAATCAGAGGGAAAGGG...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp CCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTATAAAGGGCCAACCCTaGGTCTCTGGGGGATATAAC +
Preference number: 3 (lower is better)
Translates to: PKFCQEAILWCTQDASVGIKGQP*VSGGYN
Trigger: GTTATATCCCCCAGAGACCAAGGGTTGGCCCTTTAT...ACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603649.5
3UTR-3UTR CAA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGGCTGGCCTTCAACCTTaGCAAGGCACCTGGAGTCTG +
Preference number: 3 (lower is better)
Translates to: TMRKDESRERKGQSVVWQAGLQP*QGTWSL
Trigger: CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGC...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CCA 72 bp GAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATCTaGCTGGCCTGGAATGCTGTCACACAAAGCAGATTA +
Preference number: 3 (lower is better)
Translates to: EMNKASRQGSPI*LAWNAVTQSRL
Trigger: TAATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGCCCTTTCCCTCTGATTaGTGTTCTGGAGGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: TMRKDESRERKGQSVVWQPFPSD*CSGGRG
Trigger: CCCTCTCCCTCCAGAACACAAATCAGAGGGAAAGGG...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGTTACATCTTCCTGATTaGGTAGTACAGCTGAACACC +
Preference number: 3 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMLHLPD*VVQLNT
Trigger: GGTGTTCAGCTGTACTACCAAATCAGGAAGATGTAA...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGCCAATGAAAGGGGTGTaGGCAGGAGTAGCAGCAGCA +
Preference number: 3 (lower is better)
Translates to: TMRKDESRERKGQSVVWQPMKGV*AGVAAA
Trigger: TGCTGCTGCTACTCCTGCCAACACCCCTTTCATTGG...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR TCA 72 bp AGAGTCGAGTGGGGTGCTGGTGTGTTACTCTTTTGCTaGCTCTGCAAAGAAGATGCAAGAAACGAACACCCC +
Preference number: 3 (lower is better)
Translates to: RVEWGAGVLLFC*LCKEDARNEHP
Trigger: GGGGTGTTCGTTTCTTGCATCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCAGCACCCCACTCGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR GCA 72 bp ATCCTCTGGTGTACCTGCGAATGTTCAAGTTTCCCCTaGGTGAACAGGTCACATCACCAATACTTGACTCCC +
Preference number: 3 (lower is better)
Translates to: ILWCTCECSSFP*VNRSHHQYLTP
Trigger: GGGAGTCAAGTATTGGTGATGTGACCTGTTCACGCAGGGGAAACTTGAACATTCGCAGGTACACCAGAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
3UTR CCA 72 bp CCAAGAGGTACAGGTAGGTGGTCAGTAAAGGGATGCTaGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTG +
Preference number: 3 (lower is better)
Translates to: PRGTGRWSVKGC*KERFLVTLQRL
Trigger: CAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTACTGACCACCTACCTGTACCTCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGGATAAATTGCACCCTTaGAGATCCACACACTTGATT +
Preference number: 3 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMDKLHP*RSTHLI
Trigger: AATCAAGTGTGTGGATCTCAAAGGGTGCAATTTATC...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CCA 72 bp AAAGCCTCCAGACAAGGCAGTCCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGCAGATTAGCAATAAAA +
Preference number: 3 (lower is better)
Translates to: KASRQGSPIWLA*NAVTQSRLAIK
Trigger: TTTTATTGCTAATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTGTCTGGAGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTGGTGTGTTACTCTTTaGCTGACTCTGCAAAGAAGA +
Preference number: 3 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVWCVTL*LTLQRR
Trigger: TCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCA...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATTGGTGTGTTACTCTTTaGCTGACTCTGCAAAGAAGA +
Preference number: 3 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHWCVTL*LTLQRR
Trigger: TCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCA...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGGTGAAGAGAGTGGGCTaGAAGGAAGCCCTAGAAATG +
Preference number: 3 (lower is better)
Translates to: TMRKDESRERKGQSVVWQVKRVG*KEALEM
Trigger: CATTTCTAGGGCTTCCTTCAAGCCCACTCTCTTCAC...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp CCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATATCACATCACCAATACTaGACTCCCACAGGCCAGCTC +
Preference number: 3 (lower is better)
Translates to: PRSSSCSCRKNTPTESEISHHQY*TPTGQL
Trigger: GAGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTGA...TATCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604679.5
3UTR-3UTR CAA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTGGTGTGTTACTCTTTaGCTGACTCTGCAAAGAAGA +
Preference number: 3 (lower is better)
Translates to: SLASHTPQKDLLVALCCFWCVTL*LTLQRR
Trigger: TCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCA...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp CATTCAGCGTTGCTGCATTTTCATGACTTAAGAGGTCTCTTTTTGGTGGTCGTAGGAGGTCTATTCCTGTaGAAGCAGCAACGCGAACAC +
Preference number: 3 (lower is better)
Translates to: HSALLHFHDLRGLFLVVVGGLFL*KQQREH
Trigger: GTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCC...TACGACCACCAAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAACGCTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTATTCACTAAGCCCTTaGAGCTTATATTCCACAATG +
Preference number: 3 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVYSLSP*SLYSTM
Trigger: CATTGTGGAATATAAGCTCAAAGGGCTTAGTGAATA...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTCCCTTTCCCTCTGATTaGTGTTCTGGAGGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: QRRCKKRTPPALFSLYESPFPSD*CSGGRG
Trigger: CCCTCTCCCTCCAGAACACAAATCAGAGGGAAAGGG...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTGGAGCCAGCTGCTCTTaGAGATCCTCTAGTCTTTCA +
Preference number: 3 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPGASCS*RSSSLS
Trigger: TGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTCC...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR GCA 72 bp CTCCAGACAAGGCAGTCCCATCTGGCTGGCCTGGAATaGTGTCACACAAAGCAGATTAGCAATAAAATTATT +
Preference number: 3 (lower is better)
Translates to: LQTRQSHLAGLE*CHTKQISNKII
Trigger: AATAATTTTATTGCTAATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp AGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGGTGTGTTACTCTTTaGCTGACTCTGCAAAGAAGA +
Preference number: 3 (lower is better)
Translates to: SSLSLFNWCCSMHSVVYSWCVTL*LTLQRR
Trigger: TCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCA...ACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR CAA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGTTACATCTTCCTGATTaGGTAGTACAGCTGAACACC +
Preference number: 3 (lower is better)
Translates to: TMRKDESRERKGQSVVWQLHLPD*VVQLNT
Trigger: GGTGTTCAGCTGTACTACCAAATCAGGAAGATGTAA...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAGATAAATTGCACCCTTaGAGATCCACACACTTGATT +
Preference number: 3 (lower is better)
Translates to: KWRHASFHSVMPMKGVLADKLHP*RSTHLI
Trigger: AATCAAGTGTGTGGATCTCAAAGGGTGCAATTTATC...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR GCA 72 bp AACAGGTGTTCCTTCTGCCAGGATTCAGAGGCTTTTTaGAGATCAATCTTTTTCACCAATTTGTCGGAGAGG +
Preference number: 3 (lower is better)
Translates to: NRCSFCQDSEAF*RSIFFTNLSER
Trigger: CCTCTCCGACAAATTGGTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATCCTGGCAGAAGGAACACCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR CAA 90 bp AGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTATTCACTAAGCCCTTaGAGCTTATATTCCACAATG +
Preference number: 3 (lower is better)
Translates to: SSLSLFNWCCSMHSVVYSYSLSP*SLYSTM
Trigger: CATTGTGGAATATAAGCTCAAAGGGCTTAGTGAATA...ACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
3UTR-3UTR CAA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGATTTACAACTGAAGTaGTGGAGGTGGGAGGGCTCA +
Preference number: 3 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDDLQLK*WRWEGS
Trigger: TGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGGTGAAGAGAGTGGGCTaGAAGGAAGCCCTAGAAATG +
Preference number: 3 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKVKRVG*KEALEM
Trigger: CATTTCTAGGGCTTCCTTCAAGCCCACTCTCTTCAC...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR TCA 72 bp AATGTCTTTACATCATTCAGCGTTGCTGCATTTTCATaGCTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGG +
Preference number: 3 (lower is better)
Translates to: NVFTSFSVAAFS*LKRSLFGGRTW
Trigger: CCACGTACGACCACCAAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR CCA 72 bp TTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTaGTGTATAGTTGCTGGACCAATGTCTTTACATCAT +
Preference number: 3 (lower is better)
Translates to: FPCLTGAAQCTV*CIVAGPMSLHH
Trigger: ATGATGTAAAGACATTGGTCCAGCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTTATTCACTAAGCCCTTaGAGCTTATATTCCACAATG +
Preference number: 3 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPYSLSP*SLYSTM
Trigger: CATTGTGGAATATAAGCTCAAAGGGCTTAGTGAATA...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACTATTCACTAAGCCCTTaGAGCTTATATTCCACAATG +
Preference number: 3 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHYSLSP*SLYSTM
Trigger: CATTGTGGAATATAAGCTCAAAGGGCTTAGTGAATA...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGCGAACACCCCCAGCATaGTTTTCTCTTTATGAATCT +
Preference number: 3 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKRTPPA*FSLYES
Trigger: AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCG...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGTTACATCTTCCTGATTaGGTAGTACAGCTGAACACC +
Preference number: 3 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKLHLPD*VVQLNT
Trigger: GGTGTTCAGCTGTACTACCAAATCAGGAAGATGTAA...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACTTACATCTTCCTGATTaGGTAGTACAGCTGAACACC +
Preference number: 3 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDLHLPD*VVQLNT
Trigger: GGTGTTCAGCTGTACTACCAAATCAGGAAGATGTAA...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACACCTGGAGTCTGGGTTaGTCATTTAAAGTTTTTCTT +
Preference number: 3 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHTWSLG*SFKVFL
Trigger: AAGAAAAACTTTAAATGACAAACCCAGACTCCAGGT...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGATAAATTGCACCCTTaGAGATCCACACACTTGATT +
Preference number: 3 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDDKLHP*RSTHLI
Trigger: AATCAAGTGTGTGGATCTCAAAGGGTGCAATTTATC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR-3UTR CAA 90 bp TTTCATGACTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTTACATCATTCAGCGTaGCTGCATTTTCATGACTTA +
Preference number: 3 (lower is better)
Translates to: FHDLRGLFLVVVRGMLSHLHHSA*LHFHDL
Trigger: TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAA...ATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTTAAGTCATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR TCA 72 bp CTCAACTATATAACTGCATCATTTTCATCCAGAAACTaGGATACTTGGTTAAGACAATATTCACTAAGCCCT +
Preference number: 3 (lower is better)
Translates to: LNYITASFSSRN*DTWLRQYSLSP
Trigger: AGGGCTTAGTGAATATTGTCTTAACCAAGTATCTCAGTTTCTGGATGAAAATGATGCAGTTATATAGTTGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTCGTCCGGTGGTGCTGCTaGTGCCGGTGGCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: PNSARKRSSGVPRMQVLVVRWCC*CRWRLT
Trigger: CGTCAGCCGCCACCGGCAGCAGCAGCACCACCGGAC...GACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR GCA 90 bp AACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCTGCGAATGTTCCCCGTCCGGTGGTGCTaGTGCTGCCGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: NSSQILPGSDPLVYLRMFPVRWC*CCRWRL
Trigger: CAGCCGCCACCGGCAGCAGCAGCACCACCGGACGGG...GAACATTCGCAGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR CCA 90 bp CTCTGGTGTACCTGCGAATGTTCAAGTTTCCCCTGCGTGAACAGGTCACATCACTGCTGCTGCTGCCGGTaGCGGCTGACGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LWCTCECSSFPCVNRSHHCCCCR*RLTPSP
Trigger: TGGGCTGGGCGTCAGCCGCCACCGGCAGCAGCAGCA...GTGATGTGACCTGTTCACGCAGGGGAAACTTGAACATTCGCAGGTACACCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR CCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGCAGGAAGCGATCCTCTaGTGTACCGTCCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLQEAIL*CTVRWC
Trigger: GCACCACCGGACGGTACACCAGAGGATCGCTTCCTG...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR CCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGGCACTGCCACTCTCCTaGCACACACAAGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMALPLS*HTQGGR
Trigger: GCGGCCGCCTTGTGTGTGCCAGGAGAGTGGCAGTGC...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TCCCAGGAATATTCCCACCAGGTAAGCCGGGCCAAAATGCCAAACTGTGTGGCCCAGGAGCGATCTACCTaGGGCGGCCGCCATCTCTCA +
Preference number: 4 (lower is better)
Translates to: SQEYSHQVSRAKMPNCVAQERST*GGRHLS
Trigger: TGAGAGATGGCGGCCGCCGCAGGTAGATCGCTCCTG...GGCCACACAGTTTGGCATTTTGGCCCGGCTTACCTGGTGGGAATATTCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR GCA 90 bp AGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACGTCCGGTGGTGCTGCTaGTGCCGGTGGCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: SAAINSSQILPGSDPLVYVRWCC*CRWRLT
Trigger: CGTCAGCCGCCACCGGCAGCAGCAGCACCACCGGAC...GTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000603649.5
ENST00000604372.5
ENST00000604679.5
CDS-3UTR GCA 90 bp AACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGACCGTCCGGTGGTGCTaGTGCTGCCGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: NSAAINSSQILPGSDPLVTVRWC*CCRWRL
Trigger: CAGCCGCCACCGGCAGCAGCAGCACCACCGGACGGT...CACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603649.5
ENST00000604372.5
CDS-3UTR CCA 90 bp AACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTGCTGCTGCTGCCGGTaGCGGCTGACGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NSAAINSSQILPGSDPLVCCCCR*RLTPSP
Trigger: TGGGCTGGGCGTCAGCCGCCACCGGCAGCAGCAGCA...CACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000603649.5
ENST00000604372.5
ENST00000604679.5
CDS-3UTR GCA 90 bp CCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTCAGGAGCGATCTACCTaGGGCGGCCGCCATCTCTCA +
Preference number: 4 (lower is better)
Translates to: PKFCQEAILWCTQDASVGQERST*GGRHLS
Trigger: TGAGAGATGGCGGCCGCCGCAGGTAGATCGCTCCTG...ACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGTCCGGTGGTGCTGCTaGTGCCGGTGGCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEVRWCC*CRWRLT
Trigger: CGTCAGCCGCCACCGGCAGCAGCAGCACCACCGGAC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGACCGTCCGGTGGTGCTaGTGCTGCCGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWETVRWC*CCRWRL
Trigger: CAGCCGCCACCGGCAGCAGCAGCACCACCGGACGGT...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR GCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCATGTACCGTCCGGTGGTaGTGCTGCTGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPCTVRW*CCCRWR
Trigger: CCGCCACCGGCAGCAGCAGCACCACCGGACGGTACA...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGCCAGCAGCATGGCACTaGCACTCTCCTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMPAAWH*HSPGTH
Trigger: GTGTGTGCCAGGAGAGTGGCAGTGCCATGCTGCTGG...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGGAAGGAGCTGACGACTaGGGGTGGTGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMEGADD*GWWREK
Trigger: CTTCTCCCTCCACCACCCCCAGTCGTCAGCTCCTTC...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATCAGGAGCGATCTACCTaGGGCGGCCGCCATCTCTCA +
Preference number: 4 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHQERST*GGRHLS
Trigger: TGAGAGATGGCGGCCGCCGCAGGTAGATCGCTCCTG...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGTGTACCGTCCGGTGGTaGTGCTGCTGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWECTVRW*CCCRWR
Trigger: CCGCCACCGGCAGCAGCAGCACCACCGGACGGTACA...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR GCA 90 bp AAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTCATAATCCTTCTTTCCAAGACCGTCCGGTGGTaGTGCTGCTGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KRSSGVPRMQVLVIILLSKTVRW*CCCRWR
Trigger: CCGCCACCGGCAGCAGCAGCACCACCGGACGGTCTT...GGAAAGAAGGATTATGACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR CCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGCAAGGCAGTCCCATCTaGCTGGCCTGGAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMQGSPI*LAWNAV
Trigger: GACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTG...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCTTCTCCTGTGCCTGCTaGCCACCCTTCCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLFSCAC*PPFPLQ
Trigger: CTGAAGCGGGAAGGGTGGTCAGCAGGCACAGGAGAA...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGGCACTTCAGCCTGGGTaGCGGGGTGAGACCCTCTCT +
Preference number: 4 (lower is better)
Translates to: HHQRAQQCCNKQLPNSARALQPG*RGETLS
Trigger: AGAGAGGGTCTCACCCCGTCACCCAGGCTGAAGTGC...CCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604372.5
CDS-3UTR GCA 90 bp TCTGCCAGGAAGCGATCCTCTGGTGTACCTGTAGTACTAGCTATTCAGGATGCTCAGGAGCGATCTACCTaGGGCGGCCGCCATCTCTCA +
Preference number: 4 (lower is better)
Translates to: SARKRSSGVPVVLAIQDAQERST*GGRHLS
Trigger: TGAGAGATGGCGGCCGCCGCAGGTAGATCGCTCCTG...AGCATCCTGAATAGCTAGTACTACAGGTACACCAGAGGATCGCTTCCTGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604372.5
CDS-3UTR GCA 90 bp TTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGAGTCCGGTGGTGCTGCTaGTGCCGGTGGCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: FPDPLLAVVVKIHQQSQRVRWCC*CRWRLT
Trigger: CGTCAGCCGCCACCGGCAGCAGCAGCACCACCGGAC...TCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000604372.5
ENST00000604679.5
CDS-3UTR CCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGTGGTGTACCGTCCGGTaGTGCTGCTGCTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEWCTVR*CCCCRW
Trigger: CCACCGGCAGCAGCAGCACCACCGGACGGTACACCA...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR CCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGAAATGCCAAACTGTGTaGCCATGTAGGCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLKCQTV*PCRQGH
Trigger: GTGGCCTTGCCTACATGGCCACACAGTTTGGCATTT...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCGAAGGAGCTGACGACTaGGGGTGGTGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLEGADD*GWWREK
Trigger: CTTCTCCCTCCACCACCCCCAGTCGTCAGCTCCTTC...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGAACTCCTTGCCACAATaGGGAAGGATGAATCACGTG +
Preference number: 4 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLNSLPQ*GRMNHV
Trigger: CACGTGATTCATCCTTCCTCATTGTGGCAAGGAGTT...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGCAGCATGGCACTaGCACTCTCCTGGCACACAC +
Preference number: 4 (lower is better)
Translates to: SAAINSSQILPGSDPLVYPAAWH*HSPGTH
Trigger: GTGTGTGCCAGGAGAGTGGCAGTGCCATGCTGCTGG...GTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGTGCCTCCTGAAGCAATaGAGCATCCATCTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMCLLKQ*SIHLEG
Trigger: TCCCTCGAGATGGATGCTGCATTGCTTCAGGAGGCA...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTTGCTGCTGCTGCCGGTaGCGGCTGACGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPCCCCR*RLTPSP
Trigger: TGGGCTGGGCGTCAGCCGCCACCGGCAGCAGCAGCA...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR CCA 90 bp AACAGAGTCAGAGATAGGCTTGAGTGTGAACTGACAGCGTTCACGCCGGGATGGCCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: NRVRDRLECELTAFTPGWPIWLA*NAVTQS
Trigger: GCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGG...CCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATCAAGGCAGTCCCATCTaGCTGGCCTGGAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHQGSPI*LAWNAV
Trigger: GACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTG...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGTTACAACTGAAGTTGTaGAGGTGGGAGGGCTCACAA +
Preference number: 4 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLLQLKL*RWEGSQ
Trigger: TTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAA...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGGAAGGAGCTGACGACTaGGGGTGGTGGAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: HQRAQQCCNKQLPNSARKEGADD*GWWREK
Trigger: CTTCTCCCTCCACCACCCCCAGTCGTCAGCTCCTTC...CTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPGLSVN*QRSRRD
Trigger: ATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCC...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: HQRAQQCCNKQLPNSARKGLSVN*QRSRRD
Trigger: ATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCC...CTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACGTCCGGTGGTGCTGCTaGTGCCGGTGGCGGCTGACG +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHVRWCC*CRWRLT
Trigger: CGTCAGCCGCCACCGGCAGCAGCAGCACCACCGGAC...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR GCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGTTGTTTAACTGGTGCTaGTCAATGCACAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLLFNWC*SMHSVV
Trigger: CACCACACTGTGCATTGAGCAGCACCAGTTAAACAA...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGTCCTTGTTTAACTGGTaGTGCTCAATGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLSLFNW*CSMHSV
Trigger: CACACTGTGCATTGAGCAGCACCAGTTAAACAAGGA...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTGCCGGGGTCCTGGGCTaGTCTCCGGGGCAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESAGVLG*SPGQLP
Trigger: TGGGAGCTGCCCCGGAGAGCAGCCCAGGACCCCGGC...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATTTTCATGACTTATGCTGCTGCTGCCGGTaGCGGCTGACGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VAGPMSLHHSALLHFHDLCCCCR*RLTPSP
Trigger: TGGGCTGGGCGTCAGCCGCCACCGGCAGCAGCAGCA...TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604372.5
ENST00000604679.5
CDS-3UTR CCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGCAGGAAGCGATCCTCTaGTGTACCGTCCGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEQEAIL*CTVRWC
Trigger: GCACCACCGGACGGTACACCAGAGGATCGCTTCCTG...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR CCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAGTCGAGTGGGGTGCTaGTGTGTTACTCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMSRVGC*CVTLLL
Trigger: CAGCAAAAGAGTAACACACCAGCACCCCACTCGACT...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGCAAGGCAGTCCCATCTaGCTGGCCTGGAATGCTGTC +
Preference number: 4 (lower is better)
Translates to: HHQRAQQCCNKQLPNSARQGSPI*LAWNAV
Trigger: GACAGCATTCCAGGCCAGCCAGATGGGACTGCCTTG...CCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCGGCCAATCAGTGGTGTaGCAGCCCCCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLGQSVV*QPPSSF
Trigger: AAAGGATGATGGGGGCTGCCACACCACTGATTGGCC...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTCAGCAGCAGCAATCCTaGCTGGCCTTCAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVQQQQS*LAFNLC
Trigger: GCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTG...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GGTGACGGGGTGAGACCCTCTCTGCGAATGTTCAAGTTTCCCCTGCGTGAACAGGCTCAATGCACAGTGTaGTGTATAGTTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GDGVRPSLRMFKFPLREQAQCTV*CIVAGP
Trigger: TGGTCCAGCAACTATACACCACACTGTGCATTGAGC...CTGTTCACGCAGGGGAAACTTGAACATTCGCAGAGAGGGTCTCACCCCGTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000604372.5
3UTR CAA 72 bp GCAGCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTaGCAAGGCACCTGGAGTCTGGGTTTGTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: AAAAAILAGLQP*QGTWSLGLSFK
Trigger: TTTAAATGACAAACCCAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCACACCCCCTTTCCCTCTaGTTTGTGTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPHPLSL*FVFWRE
Trigger: CTCCCTCCAGAACACAAATCAGAGGGAAAGGGGGTG...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTATTCCGTCATGCCAATaGAAGGGGTGTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVIPSCQ*KGCWQE
Trigger: CTCCTGCCAACACCCCTTTCATTGGCATGACGGAAT...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATAAGGACCCAAGAGGATaGAGCTTGCCTCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHKDPRG*SLPPEA
Trigger: TGCTTCAGGAGGCAAGCTTCATCCTCTTGGGTCCTT...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTCAAGTTTCCCCTGCGTaGACAGGTCACATCACCAAT +
Preference number: 4 (lower is better)
Translates to: APKFCQEAILWCTQDASVQVSPA*TGHITN
Trigger: ATTGGTGATGTGACCTGTTCACGCAGGGGAAACTTG...AACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR GCA 90 bp TTTCATGACTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATACCGTCCGGTGGTGCTaGTGCTGCCGGTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FHDLRGLFLVVVRGMLSHTVRWC*CCRWRL
Trigger: CAGCCGCCACCGGCAGCAGCAGCACCACCGGACGGT...ATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTTAAGTCATGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604372.5
CDS-3UTR GCA 90 bp CTCTGGTGTACCTGCGAATGTTCAAGTTTCCCCTGCGTGAACAGGTCACATCACACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LWCTCECSSFPCVNRSHHTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...GTGATGTGACCTGTTCACGCAGGGGAAACTTGAACATTCGCAGGTACACCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR GCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTATGTCCTCCCTCCCTTaGTTCCCACACACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVMSSLP*FPHTPK
Trigger: TTTTGGGGTGTGTGGGAAGCAAGGGAGGGAGGACAT...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAGGAGCCGGTTCCCCATaGACACACACAGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAGAGSP*THTEEV
Trigger: GACTTCCTCTGTGTGTGTGCATGGGGAACCGGCTCC...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TCCCAGGAATATTCCCACCAGGTAAGCCGGGCCAAAATGCCAAACTGTGTGGCCCCCATAGCACCAAAGTaGTCCTCTTCTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SQEYSHQVSRAKMPNCVAPIAPK*SSSQLF
Trigger: GAAAAGCTGAGAAGAGGACCACTTTGGTGCTATGGG...GGCCACACAGTTTGGCATTTTGGCCCGGCTTACCTGGTGGGAATATTCCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGACAAATAGAGTCGAGTaGGGTGCTGGTGTGTTACTC +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMTNRVE*GAGVLL
Trigger: GAGTAACACACCAGCACCCCACTCGACTCTATTTGT...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGCCAATCAGTGGTGTaGCAGCCCCCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: AQQCCNKQLPNSARKRSSGQSVV*QPPSSF
Trigger: AAAGGATGATGGGGGCTGCCACACCACTGATTGGCC...AGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCAGCAGCAATCCTGGCTaGCCTTCAACCTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLSSNPG*PSTFAR
Trigger: CCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCT...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCACAGCAGCAGCAATCCTaGCTGGCCTTCAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPQQQQS*LAFNLC
Trigger: GCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTG...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTCAGCAGCAGCAATCCTaGCTGGCCTTCAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: QQCCNKQLPNSARKRSSGQQQQS*LAFNLC
Trigger: GCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTG...ACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp GGAGGAGGTCTATTCCTGTTGAAGCAGCAACGCGAACACCATCTGGTGAATAGAGGGACAACTTCCATCTaGCTCCGTTCAGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: GGGLFLLKQQREHHLVNRGTTSI*LRSGSL
Trigger: AAGGCTCCCTGAACGGAGCCAGATGGAAGTTGTCCC...TCTATTCACCAGATGGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp CTCTGTCAATTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGACCAATACCGTCCGGTaGTGCTGCTGCTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: LCQFPDPLLAVVVKIHQQTNTVR*CCCCRW
Trigger: CCACCGGCAGCAGCAGCACCACCGGACGGTATTGGT...CTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAATTGACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604372.5
CDS-3UTR CCA 90 bp CAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTCACAGGAAGCGATCCTCTaGTGTACCCAGGATGCAAGT +
Preference number: 4 (lower is better)
Translates to: QILPGSDPLVYPGCKCWSQEAIL*CTQDAS
Trigger: ACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTG...TGACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR CCA 90 bp GTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATTTTCATGACTTATCCACTCCCGTCCGGTaGTGCTGCTGCTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: VAGPMSLHHSALLHFHDLSTPVR*CCCCRW
Trigger: CCACCGGCAGCAGCAGCACCACCGGACGGGAGTGGA...TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR CCA 90 bp TTTCCCCTGCGTGAACAGGTCACATCACCAATACTTGACTCCCACAGGCCAGCTCAGGAAGCGATCCTCTaGTGTACCTGCGAATGTTCA +
Preference number: 4 (lower is better)
Translates to: FPLREQVTSPILDSHRPAQEAIL*CTCECS
Trigger: TGAACATTCGCAGGTACACCAGAGGATCGCTTCCTG...AGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTGACCTGTTCACGCAGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR TCA 90 bp TCAATAAGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SISSLSLFNWCCSMHSVVGLSVN*QRSRRD
Trigger: ATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCC...CACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAGAGGTCTATTCCTGTTaGAGCAGCAACGCGAACACC +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPEVYSC*SSNANT
Trigger: GGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTC...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCGAGGTCTATTCCTGTTaGAGCAGCAACGCGAACACC +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFEVYSC*SSNANT
Trigger: GGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTC...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TTTCCCCTGCGTGAACAGGTCACATCACCAATACTTGACTCCCACAGGCCAGCTATGTTACTGGCTCCATaGTGTCCCAGGAATATTCCC +
Preference number: 4 (lower is better)
Translates to: FPLREQVTSPILDSHRPAMLLAP*CPRNIP
Trigger: GGGAATATTCCTGGGACATCATGGAGCCAGTAACAT...AGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTGACCTGTTCACGCAGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGCACCCCCTTTCCCTCTaGTTTGTGTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEHPLSL*FVFWRE
Trigger: CTCCCTCCAGAACACAAATCAGAGGGAAAGGGGGTG...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAATTCCGTCATGCCAATaGAAGGGGTGTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPIPSCQ*KGCWQE
Trigger: CTCCTGCCAACACCCCTTTCATTGGCATGACGGAAT...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTAAGGACCCAAGAGGATaGAGCTTGCCTCCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: AQQCCNKQLPNSARKRSSKDPRG*SLPPEA
Trigger: TGCTTCAGGAGGCAAGCTTCATCCTCTTGGGTCCTT...AGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACGCTTCAGGCACGCGTaGACACGCTTATACAGTAGC +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLARFRHA*TRLYSS
Trigger: GCTACTGTATAAGCGTGTTCACGCGTGCCTGAAGCG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTCAGGAGCGATCTACCTaGGGCGGCCGCCATCTCTCA +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPQERST*GGRHLS
Trigger: TGAGAGATGGCGGCCGCCGCAGGTAGATCGCTCCTG...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR GCA 90 bp AACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NSAAINSSQILPGSDPLVTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...CACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000603649.5
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATCAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGTTCTGCCTGAGCAATTaGATCCTTGAGTTGATTGTA +
Preference number: 4 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLFCLSN*ILELIV
Trigger: TACAATCAACTCAAGGATGCAATTGCTCAGGCAGAA...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAACAGGTGTTCCTTCTaGCAGGATTCAGAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMNRCSF*QDSEAF
Trigger: AAAAGCCTCTGAATCCTGGCAGAAGGAACACCTGTT...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGAAACCAACAACCTCATaGAGTGTTGCCAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLKPTTS*SVASDF
Trigger: AAAATCACTGGCAACACTGCATGAGGTTGTTGGTTT...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGCAGGAAGTGGAGACATaGATCCTTTCATTCCGTCAT +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMQEVET*ILSFRH
Trigger: ATGACGGAATGAAAGGATGCATGTCTCCACTTCCTG...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCATGTCCTCCCTCCCTTaGTTCCCACACACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFMSSLP*FPHTPK
Trigger: TTTTGGGGTGTGTGGGAAGCAAGGGAGGGAGGACAT...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGTCCTTGTTTAACTGGTaGTGCTCAATGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMSLFNW*CSMHSV
Trigger: CACACTGTGCATTGAGCAGCACCAGTTAAACAAGGA...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGAGGAGGTCTATTCCTGTTGAAGCAGCAACGCGAACACCATCTGGTGAATAGATGCCTCCTGAAGCAATaGAGCATCCATCTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGGLFLLKQQREHHLVNRCLLKQ*SIHLEG
Trigger: TCCCTCGAGATGGATGCTGCATTGCTTCAGGAGGCA...TCTATTCACCAGATGGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp AGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCTTAAATACCGTCCGGTGGTaGTGCTGCTGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RSLFGGRTWYVKSLMTSLNTVRW*CCCRWR
Trigger: CCGCCACCGGCAGCAGCAGCACCACCGGACGGTATT...TAAGCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000604372.5
CDS-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACTGCTGCTGCTGCCGGTaGCGGCTGACGCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDCCCCR*RLTPSP
Trigger: TGGGCTGGGCGTCAGCCGCCACCGGCAGCAGCAGCA...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAPIWLA*NAVTQS
Trigger: GCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAGAAAAGGCCAATCAGTaGTGTGGCAGCCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPEKANQ*CGSPHH
Trigger: ATGATGGGGGCTGCCACACCACTGATTGGCCTTTTC...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCGAAAAGGCCAATCAGTaGTGTGGCAGCCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFEKANQ*CGSPHH
Trigger: ATGATGGGGGCTGCCACACCACTGATTGGCCTTTTC...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGAGCAGCAATCCTGGCTaGCCTTCAACCTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: NSAAINSSQILPGSDPLVSSNPG*PSTFAR
Trigger: CCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCT...CACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGCAGCAGCAGCAATCCTaGCTGGCCTTCAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEQQQQS*LAFNLC
Trigger: GCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTG...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AACAGAGTCAGAGATAGGCTTGAGTGTGAACTGACAGCGTTCACGCCGGGATGGGCTCAATGCACAGTGTaGTGTATAGTTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: NRVRDRLECELTAFTPGWAQCTV*CIVAGP
Trigger: TGGTCCAGCAACTATACACCACACTGTGCATTGAGC...CCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCGCGAACACCATCTGGTaGATAGATAGCAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: RAQQCCNKQLPNSARKRSANTIW*IDSNSV
Trigger: GACAGAGTTGCTATCTATTCACCAGATGGTGTTCGC...GGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCATATTCGCTTCTCCTGTGCGCGAACACCATCTGGTaGATAGATAGCAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: PNSARKRSSGVPYSLLLCANTIW*IDSNSV
Trigger: GACAGAGTTGCTATCTATTCACCAGATGGTGTTCGC...GCACAGGAGAAGCGAATATGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGAGGTCTATTCCTGTTaGAGCAGCAACGCGAACACC +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEEVYSC*SSNANT
Trigger: GGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTATGTTACTGGCTCCATaGTGTCCCAGGAATATTCCC +
Preference number: 4 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVMLLAP*CPRNIP
Trigger: GGGAATATTCCTGGGACATCATGGAGCCAGTAACAT...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAGTGTGTCCTTCGAGATaGACAAAGCCTCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPVCPSR*TKPPDK
Trigger: CTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACAC...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCGTGTGTCCTTCGAGATaGACAAAGCCTCCAGACAAG +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFVCPSR*TKPPDK
Trigger: CTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACAC...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTAACTCCTTGCCACAATaGGGAAGGATGAATCACGTG +
Preference number: 4 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVNSLPQ*GRMNHV
Trigger: CACGTGATTCATCCTTCCTCATTGTGGCAAGGAGTT...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGATTCCGTCATGCCAATaGAAGGGGTGTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEIPSCQ*KGCWQE
Trigger: CTCCTGCCAACACCCCTTTCATTGGCATGACGGAAT...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AACAGGTCACATCACCAATACTTGACTCCCACAGGCCAGCTCCACACTCTAGCAGAGCCAGCTGCTCTTTaGGATCCTCTAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: NRSHHQYLTPTGQLHTLAEPAAL*DPLVFQ
Trigger: TTGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTC...TGCTAGAGTGTGGAGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTGACCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR TCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAATGAAGCTTGCCTCCTaGAGCAATGCAGCATCCATC +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPMKLAS*SNAASI
Trigger: GATGGATGCTGCATTGCTTCAGGAGGCAAGCTTCAT...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTATGGTACATGGAGAGTaGGGTAGAAACGGTATCTTG +
Preference number: 4 (lower is better)
Translates to: APKFCQEAILWCTQDASVMVHGE*GRNGIL
Trigger: CAAGATACCGTTTCTACCTCACTCTCCATGTACCAT...AACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWETAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCACAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TTCAAGTTTCCCCTGCGTGAACAGGTCACATCACCAATACTTGACTCCCACAGGCAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: FKFPLREQVTSPILDSHRQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...CCTGTGGGAGTCAAGTATTGGTGATGTGACCTGTTCACGCAGGGGAAACTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGCCCCGATCCTCTTCTTaGAGTTGTCGTAAAAATACA +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMPRSSS*SCRKNT
Trigger: TGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGCTGGCTGGCCTGGAATaGTGTCACACAAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: NSAAINSSQILPGSDPLVLAGLE*CHTKQI
Trigger: AATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAG...CACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTTGGTGTACCGTCCGGTaGTGCTGCTGCTGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESWCTVR*CCCCRW
Trigger: CCACCGGCAGCAGCAGCACCACCGGACGGTACACCA...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357157.10
ENST00000373053.7
CDS-3UTR CCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCCCATAGCACCAAAGTaGTCCTCTTCTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLPIAPK*SSSQLF
Trigger: GAAAAGCTGAGAAGAGGACCACTTTGGTGCTATGGG...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCAGTCGAGTGGGGTGCTaGTGTGTTACTCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFSRVGC*CVTLLL
Trigger: CAGCAAAAGAGTAACACACCAGCACCCCACTCGACT...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCGTTCACGCCGGGATGGTAGCCTCACAGATATCACAGGTAACCCATTTTGATAGTCGAGTGGGGTGCTaGTGTGTTACTCTTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SVHAGMVASQISQVTHFDSRVGC*CVTLLL
Trigger: CAGCAAAAGAGTAACACACCAGCACCCCACTCGACT...ATCAAAATGGGTTACCTGTGATATCTGTGAGGCTACCATCCCGGCGTGAACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATCCTTTGCAAGGCACCTaGAGTCTGGGTTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHPLQGT*SLGLSF
Trigger: AAATGACAAACCCAGACTCCAGGTGCCTTGCAAAGG...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCGCTCAATGCACAGTGTaGTGTATAGTTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLAQCTV*CIVAGP
Trigger: TGGTCCAGCAACTATACACCACACTGTGCATTGAGC...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPGLSVN*QRSRRD
Trigger: ATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCC...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCGCGAACACCATCTGGTaGATAGATAGCAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFANTIW*IDSNSV
Trigger: GACAGAGTTGCTATCTATTCACCAGATGGTGTTCGC...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGGCGAACACCATCTGGTaGATAGATAGCAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: HQRAQQCCNKQLPNSARKANTIW*IDSNSV
Trigger: GACAGAGTTGCTATCTATTCACCAGATGGTGTTCGC...CTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGCGAGGTCTATTCCTGTTaGAGCAGCAACGCGAACACC +
Preference number: 4 (lower is better)
Translates to: SLSLFNWCCSMHSVVYSCEVYSC*SSNANT
Trigger: GGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTC...GCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GGTGACGGGGTGAGACCCTCTCTGCGAATGTTCAAGTTTCCCCTGCGTGAACAGGTTGCTGCATTTTCATaGCTTAAGAGGTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: GDGVRPSLRMFKFPLREQVAAFS*LKRSLF
Trigger: AAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAAC...CTGTTCACGCAGGGGAAACTTGAACATTCGCAGAGAGGGTCTCACCCCGTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000604372.5
CDS-3UTR TCA 90 bp CTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCTTCTCCTGTGCCTGCTaGCCACCCTTCCCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKRSLFGGRTWYVKSLMTFSCAC*PPFPLQ
Trigger: CTGAAGCGGGAAGGGTGGTCAGCAGGCACAGGAGAA...GGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp CTCTGTCAATTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGCACATCACCAATACTTaGCTCCCACAGGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LCQFPDPLLAVVVKIHQQHITNT*LPQASS
Trigger: GGAGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTG...CTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAATTGACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR GCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAACCAACAACCTCATaGAGTGTTGCCAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMKPTTS*SVASDF
Trigger: AAAATCACTGGCAACACTGCATGAGGTTGTTGGTTT...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACTGGCTGGCCTGGAATaGTGTCACACAAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLALAGLE*CHTKQI
Trigger: AATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTACTGGTGCTGCTCAATaGACAGTGTGGTGTATAGTT +
Preference number: 4 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVTGAAQ*TVWCIV
Trigger: AACTATACACCACACTGTGCATTGAGCAGCACCAGT...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGTGTTCAAGTTTCCCCTaGGTGAACAGGTCACATCAC +
Preference number: 4 (lower is better)
Translates to: HQRAQQCCNKQLPNSARKCSSFP*VNRSHH
Trigger: GTGATGTGACCTGTTCACGCAGGGGAAACTTGAACA...CTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000604372.5
ENST00000604679.5
CDS-3UTR GCA 90 bp TTCAAGTTTCCCCTGCGTGAACAGGTCACATCACCAATACTTGACTCCCACAGGATCCTCTGGTGTACCTaGGAATGTTCAAGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: FKFPLREQVTSPILDSHRILWCT*ECSSFP
Trigger: GGGGAAACTTGAACATTCGCAGGTACACCAGAGGAT...CCTGTGGGAGTCAAGTATTGGTGATGTGACCTGTTCACGCAGGGGAAACTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR CCA 90 bp AGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCCATAGCACCAAAGTaGTCCTCTTCTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SAAINSSQILPGSDPLVYPIAPK*SSSQLF
Trigger: GAAAAGCTGAGAAGAGGACCACTTTGGTGCTATGGG...GTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCACAAATAGAGTCGAGTaGGGTGCTGGTGTGTTACTC +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFTNRVE*GAGVLL
Trigger: GAGTAACACACCAGCACCCCACTCGACTCTATTTGT...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGGCTCACAAACAGTGTaGAAGTGTGTGTCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEGSQTV*KCVSFE
Trigger: CTCGAAGGACACACACTTCCACACTGTTTGTGAGCC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TTCCCCTGCGTGAACAGGTCACATCACCAATACTTGACTCCCACAGGCCAGCTCGTGGTGTATAGTTGCTaGACCAATGTCTTTACATCA +
Preference number: 4 (lower is better)
Translates to: FPCVNRSHHQYLTPTGQLVVYSC*TNVFTS
Trigger: TGATGTAAAGACATTGGTCCAGCAACTATACACCAC...GAGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTGACCTGTTCACGCAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR CCA 90 bp AACAGAGTCAGAGATAGGCTTGAGTGTGAACTGACAGCGTTCACGCCGGGATGGCTTTCCTTGTTTAACTaGTGCTGCTCAATGCACAGT +
Preference number: 4 (lower is better)
Translates to: NRVRDRLECELTAFTPGWLSLFN*CCSMHS
Trigger: ACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAG...CCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGCACTGCCACTCTCCTaGCACACACAAGGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDALPLS*HTQGGR
Trigger: GCGGCCGCCTTGTGTGTGCCAGGAGAGTGGCAGTGC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGAACTCTCCAACTCTCTaGGCTTTCCACATCTTCACC +
Preference number: 4 (lower is better)
Translates to: HQRAQQCCNKQLPNSARKNSPTL*AFHIFT
Trigger: GGTGAAGATGTGGAAAGCCCAGAGAGTTGGAGAGTT...CTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604679.5
3UTR CAA 72 bp CCCTTTGAGATCCACACACTTGATTTACAACTGAAGTaGTGGAGGTGGGAGGGCTCACAAACAGTGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PFEIHTLDLQLK*WRWEGSQTVWK
Trigger: CTTCCACACTGTTTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATGTGTTACTCTTTTGCTaGCTCTGCAAAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHVLLFC*LCKEDA
Trigger: TGCATCTTCTTTGCAGAGTCAGCAAAAGAGTAACAC...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTCACCCCCTTTCCCTCTaGTTTGTGTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPHPLSL*FVFWRE
Trigger: CTCCCTCCAGAACACAAATCAGAGGGAAAGGGGGTG...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGAGCCAGCTGCTCTTTaGGATCCTCTAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEEPAAL*DPLVFQ
Trigger: TTGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGAACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FPDPLLAVVVKIHQQSQRTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...TCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCCCCCGATCCTCTTCTTaGAGTTGTCGTAAAAATACA +
Preference number: 4 (lower is better)
Translates to: RAQQCCNKQLPNSARKRSPRSSS*SCRKNT
Trigger: TGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG...GGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCTTAAGGTCCATTTCTaGCTGAGCAATTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLLKVHF*LSNCIL
Trigger: AAGGATGCAATTGCTCAGGCAGAAATGGACCTTAAG...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTCTGGCCTTCAACCTTTaGAAGGCACCTGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPLAFNL*KAPGVW
Trigger: CCAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAG...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAAGATTTGCTCGTTaGACTGTGCTGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMKRFAR*TVLFLL
Trigger: AAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTT...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCACACCCCAAAAAGATTTaGTCGTTGCACTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPHPKKI*SLHCAV
Trigger: AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTG...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGCACCCCAAAAAGATTTaGTCGTTGCACTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HHQRAQQCCNKQLPNSARHPKKI*SLHCAV
Trigger: AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTG...CCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp CAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTACTGGTGCTGCTCAATaGACAGTGTGGTGTATAGTT +
Preference number: 4 (lower is better)
Translates to: QQCCNKQLPNSARKRSSGTGAAQ*TVWCIV
Trigger: AACTATACACCACACTGTGCATTGAGCAGCACCAGT...ACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTTTGTTTAACTGGTGCTaGTCAATGCACAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: AQQCCNKQLPNSARKRSSLFNWC*SMHSVV
Trigger: CACCACACTGTGCATTGAGCAGCACCAGTTAAACAA...AGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGTCCTTGTTTAACTGGTaGTGCTCAATGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: HHQRAQQCCNKQLPNSARSLFNW*CSMHSV
Trigger: CACACTGTGCATTGAGCAGCACCAGTTAAACAAGGA...CCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGCCAAGAGGATGAAGCTTaGCTCCTGAAGCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSLFNWCCSMHSVVYSCQEDEA*LLKQCS
Trigger: GCTGCATTGCTTCAGGAGGCAAGCTTCATCCTCTTG...GCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp GAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTCATAATCCTTCTTTCTGTTCAAGTTTCCCCTaGGTGAACAGGTCACATCAC +
Preference number: 4 (lower is better)
Translates to: EAILWCTQDASVGHNPSFCSSFP*VNRSHH
Trigger: GTGATGTGACCTGTTCACGCAGGGGAAACTTGAACA...GAAAGAAGGATTATGACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR CCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAAGTTCAAAACCATTCTaGCCAACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPSSKPF*PTWQNP
Trigger: GGGGTTTTGCCATGTTGGCCAGAATGGTTTTGAACT...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357157.10
CDS-3UTR CCA 90 bp TCAATAAGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGAAATGCCAAACTGTGTaGCCATGTAGGCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: SISSLSLFNWCCSMHSVVKCQTV*PCRQGH
Trigger: GTGGCCTTGCCTACATGGCCACACAGTTTGGCATTT...CACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCTCAGTAAAGGGATGCTaGAAGGAAAGATTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLSVKGC*KERFLV
Trigger: TACCAGGAATCTTTCCTTCCAGCATCCCTTTACTGA...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTGGCCAATCAGTGGTGTaGCAGCCCCCATCATCCTTT +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPGQSVV*QPPSSF
Trigger: AAAGGATGATGGGGGCTGCCACACCACTGATTGGCC...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCCGTTCAGGGAGCCTTaGGGCAGGGCTGTTAAGAAC +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHPFREP*GRAVKN
Trigger: GTTCTTAACAGCCCTGCCCCAAGGCTCCCTGAACGG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTGGGACAACTTCCATCTaGCTCCGTTCAGGGAGCCTT +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPGTTSI*LRSGSL
Trigger: AAGGCTCCCTGAACGGAGCCAGATGGAAGTTGTCCC...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGATGTTACTGGCTCCATaGTGTCCCAGGAATATTCCC +
Preference number: 4 (lower is better)
Translates to: TMRKDESRERKGQSVVWQMLLAP*CPRNIP
Trigger: GGGAATATTCCTGGGACATCATGGAGCCAGTAACAT...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAGTGATTTTTAGACACTaGTCCAGAGCACTGGGATAT +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPVIFRH*SRALGY
Trigger: ATATCCCAGTGCTCTGGATCAGTGTCTAAAAATCAC...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGGTGATTTTTAGACACTaGTCCAGAGCACTGGGATAT +
Preference number: 4 (lower is better)
Translates to: HQRAQQCCNKQLPNSARKVIFRH*SRALGY
Trigger: ATATCCCAGTGCTCTGGATCAGTGTCTAAAAATCAC...CTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCACCCCCTTTCCCTCTaGTTTGTGTTCTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHHPLSL*FVFWRE
Trigger: CTCCCTCCAGAACACAAATCAGAGGGAAAGGGGGTG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCAACCTTACATCTTCCTaGTTTGGTAGTACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLNLTSS*FGSTAE
Trigger: TTCAGCTGTACTACCAAATCAGGAAGATGTAAGGTT...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGAGACACAGATTCCTTTaGCTCTTCAAGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWERHRFL*LFKRRC
Trigger: ACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCT...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCTTACGCTTCAGGCACGCGTaGACACGCTTATACAGTAGC +
Preference number: 4 (lower is better)
Translates to: RSLFGGRTWYVKSLMTSLRFRHA*TRLYSS
Trigger: GCTACTGTATAAGCGTGTTCACGCGTGCCTGAAGCG...TAAGCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp CTCTGTCAATTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGCAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LCQFPDPLLAVVVKIHQQQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...CTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAATTGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTGTGGTGTATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATCAGAGGGCACAACAGTaGTGCAATAAACAGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VWCIVAGPMSLHHSALLHQRAQQ*CNKQLP
Trigger: TGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTG...ATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATACACCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCACTTAAGGTCCATTTCTaGCTGAGCAATTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPLKVHF*LSNCIL
Trigger: AAGGATGCAATTGCTCAGGCAGAAATGGACCTTAAG...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGAACAGGTGTTCCTTCTaGCAGGATTCAGAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWENRCSF*QDSEAF
Trigger: AAAAGCCTCTGAATCCTGGCAGAAGGAACACCTGTT...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATAAACCAACAACCTCATaGAGTGTTGCCAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHKPTTS*SVASDF
Trigger: AAAATCACTGGCAACACTGCATGAGGTTGTTGGTTT...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGCAGGAAGTGGAGACATaGATCCTTTCATTCCGTCAT +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEQEVET*ILSFRH
Trigger: ATGACGGAATGAAAGGATGCATGTCTCCACTTCCTG...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGCACCCCAAAAAGATTTaGTCGTTGCACTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEHPKKI*SLHCAV
Trigger: AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTG...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCAGTGTGGTGTATAGTTaGTGGACCAATGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLSVVYS*WTNVFT
Trigger: TGTAAAGACATTGGTCCAGCAACTATACACCACACT...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCAGTGTGGTGTATAGTTaGTGGACCAATGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: RAQQCCNKQLPNSARKRSSVVYS*WTNVFT
Trigger: TGTAAAGACATTGGTCCAGCAACTATACACCACACT...GGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAACTGGTGCTGCTCAATaGACAGTGTGGTGTATAGTT +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLATGAAQ*TVWCIV
Trigger: AACTATACACCACACTGTGCATTGAGCAGCACCAGT...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGTTGTTTAACTGGTGCTaGTCAATGCACAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWELFNWC*SMHSVV
Trigger: CACCACACTGTGCATTGAGCAGCACCAGTTAAACAA...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTCCCATAGCACCAAAGTaGTCCTCTTCTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SSLSLFNWCCSMHSVVYSPIAPK*SSSQLF
Trigger: GAAAAGCTGAGAAGAGGACCACTTTGGTGCTATGGG...ACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp ATAAACCACTGTAACATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCAAATGCCAAACTGTGTaGCCATGTAGGCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: INHCNIIRGHNSAAINSSKCQTV*PCRQGH
Trigger: GTGGCCTTGCCTACATGGCCACACAGTTTGGCATTT...GGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATGTTACAGTGGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHPIWLA*NAVTQS
Trigger: GCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CTCTGTCAATTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGGGCTCACAAACAGTGTaGAAGTGTGTGTCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: LCQFPDPLLAVVVKIHQQGSQTV*KCVSFE
Trigger: CTCGAAGGACACACACTTCCACACTGTTTGTGAGCC...CTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAATTGACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTAGCAGCAATCCTGGCTaGCCTTCAACCTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPSSNPG*PSTFAR
Trigger: CCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCT...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCTGGTGGTGTATAGTTGCTaGACCAATGTCTTTACATCA +
Preference number: 4 (lower is better)
Translates to: AAINSSQILPGSDPLVYLVVYSC*TNVFTS
Trigger: TGATGTAAAGACATTGGTCCAGCAACTATACACCAC...CAGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000604372.5
ENST00000604679.5
CDS-3UTR CCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCACTTTCCTTGTTTAACTaGTGCTGCTCAATGCACAGT +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPLSLFN*CCSMHS
Trigger: ACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAG...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCGTTCACGCCGGGATGGTAGCCTCACAGATATCACAGGTAACCCATTTTGATCTTTCCTTGTTTAACTaGTGCTGCTCAATGCACAGT +
Preference number: 4 (lower is better)
Translates to: SVHAGMVASQISQVTHFDLSLFN*CCSMHS
Trigger: ACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAG...ATCAAAATGGGTTACCTGTGATATCTGTGAGGCTACCATCCCGGCGTGAACGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGCCAGGAAGCGATCCTCTaGTGTACCATATTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLSLFNWCCSMHSVVYSCQEAIL*CTIFAS
Trigger: AGAAGCGAATATGGTACACCAGAGGATCGCTTCCTG...GCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp GTGTGGTGTATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATCAGGAAGCGATCCTCTaGTGTACCTGTAGTACTAGC +
Preference number: 4 (lower is better)
Translates to: VWCIVAGPMSLHHSALLHQEAIL*CTCSTS
Trigger: GCTAGTACTACAGGTACACCAGAGGATCGCTTCCTG...ATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATACACCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604372.5
CDS-3UTR CCA 90 bp GAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTCATAATCCTTCTTTCAAGATGTCACTGGCATaGTACATGGAGAGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: EAILWCTQDASVGHNPSFKMSLA*YMESEV
Trigger: TACCTCACTCTCCATGTACCATGCCAGTGACATCTT...GAAAGAAGGATTATGACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR TCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGGCTTGAGTGTGAACTaGCAGCGTTCACGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDGLSVN*QRSRRD
Trigger: ATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGTGATTTTTAGACACTaGTCCAGAGCACTGGGATAT +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEVIFRH*SRALGY
Trigger: ATATCCCAGTGCTCTGGATCAGTGTCTAAAAATCAC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAGTGATTTTTAGACACTaGTCCAGAGCACTGGGATAT +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAVIFRH*SRALGY
Trigger: ATATCCCAGTGCTCTGGATCAGTGTCTAAAAATCAC...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCTCTTTTCATACACAATaGTCCCAAAGGAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLSFHTQ*SQRRKK
Trigger: TTTCTTCCTCCTTTGGGATCATTGTGTATGAAAAGA...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGAGAGCCAGCTGCTCTTTaGGATCCTCTAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: FPDPLLAVVVKIHQQSQREPAAL*DPLVFQ
Trigger: TTGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTC...TCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CTCTGTCAATTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGGAGCCAGCTGCTCTTTaGGATCCTCTAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: LCQFPDPLLAVVVKIHQQEPAAL*DPLVFQ
Trigger: TTGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTC...CTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAATTGACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TCAATAAGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGATGGTACATGGAGAGTaGGGTAGAAACGGTATCTTG +
Preference number: 4 (lower is better)
Translates to: SISSLSLFNWCCSMHSVVMVHGE*GRNGIL
Trigger: CAAGATACCGTTTCTACCTCACTCTCCATGTACCAT...CACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR GCA 90 bp AGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCTTAACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSLFGGRTWYVKSLMTSLTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...TAAGCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGCCCCGATCCTCTTCTTaGAGTTGTCGTAAAAATACA +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEPRSSS*SCRKNT
Trigger: TGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGAGGAGGTCTATTCCTGTTGAAGCAGCAACGCGAACACCATCTGGTGAATAGACTCCCAGCTTCCACCTaGAATGCTTTAATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: GGGLFLLKQQREHHLVNRLPAST*NALIKK
Trigger: CTTTTTAATTAAAGCATTGCAGGTGGAAGCTGGGAG...TCTATTCACCAGATGGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCCTGGCCTTCAACCTTTaGAAGGCACCTGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVILAFNL*KAPGVW
Trigger: CCAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAG...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGAGGAGGTCTATTCCTGTTGAAGCAGCAACGCGAACACCATCTGGTGAATAGAAGTGTGGTGTATAGTTaGTGGACCAATGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: GGGLFLLKQQREHHLVNRSVVYS*WTNVFT
Trigger: TGTAAAGACATTGGTCCAGCAACTATACACCACACT...TCTATTCACCAGATGGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGCACTGGTGCTGCTCAATaGACAGTGTGGTGTATAGTT +
Preference number: 4 (lower is better)
Translates to: SLSLFNWCCSMHSVVYSCTGAAQ*TVWCIV
Trigger: AACTATACACCACACTGTGCATTGAGCAGCACCAGT...GCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGGAGCCGGTTCCCCATaGACACACACAGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDGAGSP*THTEEV
Trigger: GACTTCCTCTGTGTGTGTGCATGGGGAACCGGCTCC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTTTGGTGGTCGTACGTaGTATGTTAAGTCATTAATG +
Preference number: 4 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVFGGRT*YVKSLM
Trigger: CATTAATGACTTAACATACCACGTACGACCACCAAA...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCAGCGCAGATGTCATCTaGAAATATGGTAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLSADVI*KYGRKC
Trigger: ACATTTTCTACCATATTTCCAGATGACATCTGCGCT...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACAGCAGCAATCCTGGCTaGCCTTCAACCTTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHSSNPG*PSTFAR
Trigger: CCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCT...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTAAGATGTCACTGGCATaGTACATGGAGAGTGAGGTA +
Preference number: 4 (lower is better)
Translates to: SSLSLFNWCCSMHSVVYSKMSLA*YMESEV
Trigger: TACCTCACTCTCCATGTACCATGCCAGTGACATCTT...ACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR TCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTGAGGTCTATTCCTGTTaGAGCAGCAACGCGAACACC +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESEVYSC*SSNANT
Trigger: GGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTC...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTATGTTACTGGCTCCATaGTGTCCCAGGAATATTCCC +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPMLLAP*CPRNIP
Trigger: GGGAATATTCCTGGGACATCATGGAGCCAGTAACAT...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATAGGCTTGATGTTACTGGCTCCATaGTGTCCCAGGAATATTCCC +
Preference number: 4 (lower is better)
Translates to: SSSCSCRKNTPTESEIGLMLLAP*CPRNIP
Trigger: GGGAATATTCCTGGGACATCATGGAGCCAGTAACAT...CAAGCCTATCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCAGAGCAATTGCATCCTTaGGTTGATTGTATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPEQLHP*VDCISL
Trigger: TAGAGAAATACAATCAACTCAAGGATGCAATTGCTC...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGGAGCAATTGCATCCTTaGGTTGATTGTATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: HHQRAQQCCNKQLPNSAREQLHP*VDCISL
Trigger: TAGAGAAATACAATCAACTCAAGGATGCAATTGCTC...CCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp AAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCAACTCCTTGCCACAATaGGGAAGGATGAATCACGTG +
Preference number: 4 (lower is better)
Translates to: KRSLFGGRTWYVKSLMTSNSLPQ*GRMNHV
Trigger: CACGTGATTCATCCTTCCTCATTGTGGCAAGGAGTT...GCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCATTCCGTCATGCCAATaGAAGGGGTGTTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIIPSCQ*KGCWQE
Trigger: CTCCTGCCAACACCCCTTTCATTGGCATGACGGAAT...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGGTTGCTGCATTTTCATaGCTTAAGAGGTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: HQRAQQCCNKQLPNSARKVAAFS*LKRSLF
Trigger: AAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAAC...CTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCTTACAAGTTTCCCCTGCGTaGACAGGTCACATCACCAAT +
Preference number: 4 (lower is better)
Translates to: RSLFGGRTWYVKSLMTSLQVSPA*TGHITN
Trigger: ATTGGTGATGTGACCTGTTCACGCAGGGGAAACTTG...TAAGCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000604372.5
ENST00000604679.5
CDS-3UTR TCA 90 bp GTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATTTTCATGACTTACAAGTTTCCCCTGCGTaGACAGGTCACATCACCAAT +
Preference number: 4 (lower is better)
Translates to: VAGPMSLHHSALLHFHDLQVSPA*TGHITN
Trigger: ATTGGTGATGTGACCTGTTCACGCAGGGGAAACTTG...TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604372.5
ENST00000604679.5
CDS-3UTR GCA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCAAAATATGCATACATTaGCATGGCACTTCCATAAGT +
Preference number: 4 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLKICIH*HGTSIS
Trigger: ACTTATGGAAGTGCCATGGCAATGTATGCATATTTT...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCATTCTGCCTGAGCAATTaGATCCTTGAGTTGATTGTA +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAFCLSN*ILELIV
Trigger: TACAATCAACTCAAGGATGCAATTGCTCAGGCAGAA...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGCTTAAGGTCCATTTCTaGCTGAGCAATTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: TMRKDESRERKGQSVVWQLKVHF*LSNCIL
Trigger: AAGGATGCAATTGCTCAGGCAGAAATGGACCTTAAG...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCGATTCAGAGGCTTTTTaGAGATCAATCTTTTTCACC +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFDSEAF*RSIFFT
Trigger: GGTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATC...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GGAGGAGGTCTATTCCTGTTGAAGCAGCAACGCGAACACCATCTGGTGAATAGAGATTCAGAGGCTTTTTaGAGATCAATCTTTTTCACC +
Preference number: 4 (lower is better)
Translates to: GGGLFLLKQQREHHLVNRDSEAF*RSIFFT
Trigger: GGTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATC...TCTATTCACCAGATGGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACTCCCAGCTTCCACCTaGAATGCTTTAATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLALPAST*NALIKK
Trigger: CTTTTTAATTAAAGCATTGCAGGTGGAAGCTGGGAG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGCTCCCAGCTTCCACCTaGAATGCTTTAATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWELPAST*NALIKK
Trigger: CTTTTTAATTAAAGCATTGCAGGTGGAAGCTGGGAG...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGCTGGCCTTCAACCTTTaGAAGGCACCTGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKLAFNL*KAPGVW
Trigger: CCAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAG...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCATGTCCTCCCTCCCTTaGTTCCCACACACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIMSSLP*FPHTPK
Trigger: TTTTGGGGTGTGTGGGAAGCAAGGGAGGGAGGACAT...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTGTGGTGTATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATTCCTTGTTTAACTGGTaGTGCTCAATGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: VWCIVAGPMSLHHSALLHSLFNW*CSMHSV
Trigger: CACACTGTGCATTGAGCAGCACCAGTTAAACAAGGA...ATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATACACCACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTTGGTGGTCGTACGTaGTATGTTAAGTCATTAATG +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFFGGRT*YVKSLM
Trigger: CATTAATGACTTAACATACCACGTACGACCACCAAA...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGTTTGGTGGTCGTACGTaGTATGTTAAGTCATTAATG +
Preference number: 4 (lower is better)
Translates to: HHQRAQQCCNKQLPNSARFGGRT*YVKSLM
Trigger: CATTAATGACTTAACATACCACGTACGACCACCAAA...CCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCATTTGGTGGTCGTACGTaGTATGTTAAGTCATTAATG +
Preference number: 4 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPFGGRT*YVKSLM
Trigger: CATTAATGACTTAACATACCACGTACGACCACCAAA...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTCCCATAGCACCAAAGTaGTCCTCTTCTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPPIAPK*SSSQLF
Trigger: GAAAAGCTGAGAAGAGGACCACTTTGGTGCTATGGG...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACCCCATCTGGCTGGCCTaGAATGCTGTCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDPIWLA*NAVTQS
Trigger: GCTTTGTGTGACAGCATTCCAGGCCAGCCAGATGGG...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATAGGCTTGTTACAACTGAAGTTGTaGAGGTGGGAGGGCTCACAA +
Preference number: 4 (lower is better)
Translates to: SSSCSCRKNTPTESEIGLLQLKL*RWEGSQ
Trigger: TTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAA...CAAGCCTATCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTGAAAAGGCCAATCAGTaGTGTGGCAGCCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESEKANQ*CGSPHH
Trigger: ATGATGGGGGCTGCCACACCACTGATTGGCCTTTTC...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCCCTTTGCAAGGCACCTaGAGTCTGGGTTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: KRSLFGGRTWYVKSLMTSPLQGT*SLGLSF
Trigger: AAATGACAAACCCAGACTCCAGGTGCCTTGCAAAGG...GCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAGTGGTGTATAGTTGCTaGACCAATGTCTTTACATCA +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAVVYSC*TNVFTS
Trigger: TGATGTAAAGACATTGGTCCAGCAACTATACACCAC...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CAA 72 bp TTGAGATCCTCTAGTCTTTCAATAAGCTCCCTTTCCTaGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRSSSLSISSLS*FNWCCSMHSVV
Trigger: CACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGAAAGACTAGAGGATCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR TCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGAGCAATTGCATCCTTaGGTTGATTGTATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEEQLHP*VDCISL
Trigger: TAGAGAAATACAATCAACTCAAGGATGCAATTGCTC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGAACCTTACATCTTCCTaGTTTGGTAGTACAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TMRKDESRERKGQSVVWQNLTSS*FGSTAE
Trigger: TTCAGCTGTACTACCAAATCAGGAAGATGTAAGGTT...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp TCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATAGGCTTGAGACACAGATTCCTTTaGCTCTTCAAGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: SSSCSCRKNTPTESEIGLRHRFL*LFKRRC
Trigger: ACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCT...CAAGCCTATCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCATGAAGCTTGCCTCCTaGAGCAATGCAGCATCCATC +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIMKLAS*SNAASI
Trigger: GATGGATGCTGCATTGCTTCAGGAGGCAAGCTTCAT...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGACAGCTCCCAAATTCTaGCAGGAAGCGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKTAPKF*QEAILW
Trigger: CCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGT...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCAAAATATGCATACATTaGCATGGCACTTCCATAAGT +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFKICIH*HGTSIS
Trigger: ACTTATGGAAGTGCCATGGCAATGTATGCATATTTT...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATaGACAAACAGGATAAATGGG +
Preference number: 4 (lower is better)
Translates to: SLASHTPQKDLLVALCCFFLKTL*TNRING
Trigger: CCCATTTATCCTGTTTGTGCATAGGGTTTTTAAGAA...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGAAAAGATTTGCTCGTTaGACTGTGCTGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEKRFAR*TVLFLL
Trigger: AAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTT...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAAAAAGATTTGCTCGTTaGACTGTGCTGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAKRFAR*TVLFLL
Trigger: AAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTT...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGATGTCCTCCCTCCCTTaGTTCCCACACACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKMSSLP*FPHTPK
Trigger: TTTTGGGGTGTGTGGGAAGCAAGGGAGGGAGGACAT...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCCAAGAGGATGAAGCTTaGCTCCTGAAGCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIQEDEA*LLKQCS
Trigger: GCTGCATTGCTTCAGGAGGCAAGCTTCATCCTCTTG...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATTTTCATGACTTATGTTCAAGTTTCCCCTaGGTGAACAGGTCACATCAC +
Preference number: 4 (lower is better)
Translates to: VAGPMSLHHSALLHFHDLCSSFP*VNRSHH
Trigger: GTGATGTGACCTGTTCACGCAGGGGAAACTTGAACA...TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000604372.5
ENST00000604679.5
CDS-3UTR GCA 90 bp CCTTCTTTCCTAATAAGCATAAAGGGCCAACCCTTGGTCTCTGGGGGATATAACTATAACAGAACCATCTaGGAATGTTCAAGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: PSFLISIKGQPLVSGGYNYNRTI*ECSSFP
Trigger: GGGGAAACTTGAACATTCGCAGATGGTTCTGTTATA...GTTATATCCCCCAGAGACCAAGGGTTGGCCCTTTATGCTTATTAGGAAAGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTAAATGCCAAACTGTGTaGCCATGTAGGCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESKCQTV*PCRQGH
Trigger: GTGGCCTTGCCTACATGGCCACACAGTTTGGCATTT...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCAAATGCCAAACTGTGTaGCCATGTAGGCAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIKCQTV*PCRQGH
Trigger: GTGGCCTTGCCTACATGGCCACACAGTTTGGCATTT...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTTCTGTCTCTGGCTTCTaGATAAACATATTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPSVSGF*INIFLA
Trigger: CGCCAGGAATATGTTTATCCAGAAGCCAGAGACAGA...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACACAAATAGAGTCGAGTaGGGTGCTGGTGTGTTACTC +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHTNRVE*GAGVLL
Trigger: GAGTAACACACCAGCACCCCACTCGACTCTATTTGT...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTGGCTCACAAACAGTGTaGAAGTGTGTGTCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESGSQTV*KCVSFE
Trigger: CTCGAAGGACACACACTTCCACACTGTTTGTGAGCC...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACTTACAACTGAAGTTGTaGAGGTGGGAGGGCTCACAA +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHLQLKL*RWEGSQ
Trigger: TTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAA...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACGCTCAATGCACAGTGTaGTGTATAGTTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHAQCTV*CIVAGP
Trigger: TGGTCCAGCAACTATACACCACACTGTGCATTGAGC...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCGCTCAATGCACAGTGTaGTGTATAGTTGCTGGACCA +
Preference number: 4 (lower is better)
Translates to: LKRSLFGGRTWYVKSLMTAQCTV*CIVAGP
Trigger: TGGTCCAGCAACTATACACCACACTGTGCATTGAGC...GGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
3UTR CAA 72 bp AAACAGGTGTTCCTTCTGCCAGGATTCAGAGGCTTTTaGCAGATCAATCTTTTTCACCAATTTGTCGGAGAG +
Preference number: 4 (lower is better)
Translates to: KQVFLLPGFRGF*QINLFHQFVGE
Trigger: CTCTCCGACAAATTGGTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATCCTGGCAGAAGGAACACCTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR TCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTGCGAACACCATCTGGTaGATAGATAGCAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESANTIW*IDSNSV
Trigger: GACAGAGTTGCTATCTATTCACCAGATGGTGTTCGC...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGGAGCAATTGCATCCTTaGGTTGATTGTATTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TMRKDESRERKGQSVVWQEQLHP*VDCISL
Trigger: TAGAGAAATACAATCAACTCAAGGATGCAATTGCTC...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACAGACACAGATTCCTTTaGCTCTTCAAGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHRHRFL*LFKRRC
Trigger: ACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCT...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGGTTGCTGCATTTTCATaGCTTAAGAGGTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: TMRKDESRERKGQSVVWQVAAFS*LKRSLF
Trigger: AAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAAC...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATAGGCTTGCCCCGATCCTCTTCTTaGAGTTGTCGTAAAAATACA +
Preference number: 4 (lower is better)
Translates to: SSSCSCRKNTPTESEIGLPRSSS*SCRKNT
Trigger: TGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG...CAAGCCTATCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCCCCCGATCCTCTTCTTaGAGTTGTCGTAAAAATACA +
Preference number: 4 (lower is better)
Translates to: KRSLFGGRTWYVKSLMTSPRSSS*SCRKNT
Trigger: TGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG...GCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TTCCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATTCTGCCTGAGCAATTaGATCCTTGAGTTGATTGTA +
Preference number: 4 (lower is better)
Translates to: FPDPLLAVVVKIHQQSQRFCLSN*ILELIV
Trigger: TACAATCAACTCAAGGATGCAATTGCTCAGGCAGAA...TCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGGATTCAGAGGCTTTTTaGAGATCAATCTTTTTCACC +
Preference number: 4 (lower is better)
Translates to: TMRKDESRERKGQSVVWQDSEAF*RSIFFT
Trigger: GGTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATC...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACCTGGCTGGCCTGGAATaGTGTCACACAAAGCAGATT +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDLAGLE*CHTKQI
Trigger: AATCTGCTTTGTGTGACAGCATTCCAGGCCAGCCAG...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGTTCTTAAAAACCCTATaGACAAACAGGATAAATGGG +
Preference number: 4 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEFLKTL*TNRING
Trigger: CCCATTTATCCTGTTTGTGCATAGGGTTTTTAAGAA...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp GTGTGGTGTATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATAGTGTGGTGTATAGTTaGTGGACCAATGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: VWCIVAGPMSLHHSALLHSVVYS*WTNVFT
Trigger: TGTAAAGACATTGGTCCAGCAACTATACACCACACT...ATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATACACCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCTTATTGTTTAACTGGTGCTaGTCAATGCACAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RSLFGGRTWYVKSLMTSLLFNWC*SMHSVV
Trigger: CACCACACTGTGCATTGAGCAGCACCAGTTAAACAA...TAAGCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACTCCTTGTTTAACTGGTaGTGCTCAATGCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHSLFNW*CSMHSV
Trigger: CACACTGTGCATTGAGCAGCACCAGTTAAACAAGGA...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTTGCTTTGGTGGTCGTACGTaGTATGTTAAGTCATTAATG +
Preference number: 4 (lower is better)
Translates to: SLSLFNWCCSMHSVVYSCFGGRT*YVKSLM
Trigger: CATTAATGACTTAACATACCACGTACGACCACCAAA...GCAACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTCATCTCTACTCTTTTTaGTGGTCGTACGTGGTATGT +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPHLYSF*WSYVVC
Trigger: ACATACCACGTACGACCACCAAAAAGAGTAGAGATG...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357157.10
CDS-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTCCCATAGCACCAAAGTaGTCCTCTTCTCAGCTTTTC +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESPIAPK*SSSQLF
Trigger: GAAAAGCTGAGAAGAGGACCACTTTGGTGCTATGGG...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACTCTGTCTCTGGCTTCTaGATAAACATATTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHSVSGF*INIFLA
Trigger: CGCCAGGAATATGTTTATCCAGAAGCCAGAGACAGA...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTACAAATAGAGTCGAGTaGGGTGCTGGTGTGTTACTC +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESTNRVE*GAGVLL
Trigger: GAGTAACACACCAGCACCCCACTCGACTCTATTTGT...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGGGCTCACAAACAGTGTaGAAGTGTGTGTCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKGSQTV*KCVSFE
Trigger: CTCGAAGGACACACACTTCCACACTGTTTGTGAGCC...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCAGCCTTTCCTTGTTTAACTaGTGCTGCTCAATGCACAGT +
Preference number: 4 (lower is better)
Translates to: KRSLFGGRTWYVKSLMTSLSLFN*CCSMHS
Trigger: ACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAG...GCTGGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTCAGGAAGCGATCCTCTaGTGTACCATATTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESQEAIL*CTIFAS
Trigger: AGAAGCGAATATGGTACACCAGAGGATCGCTTCCTG...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACGTGTTACTCTTTTGCTaGCTCTGCAAAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHVLLFC*LCKEDA
Trigger: TGCATCTTCTTTGCAGAGTCAGCAAAAGAGTAACAC...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGAACTCCTTGCCACAATaGGGAAGGATGAATCACGTG +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKNSLPQ*GRMNHV
Trigger: CACGTGATTCATCCTTCCTCATTGTGGCAAGGAGTT...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGGAGCCAGCTGCTCTTTaGGATCCTCTAGTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKEPAAL*DPLVFQ
Trigger: TTGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTC...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCCAGGAAGTGGAGACATaGATCCTTTCATTCCGTCAT +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIQEVET*ILSFRH
Trigger: ATGACGGAATGAAAGGATGCATGTCTCCACTTCCTG...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCCACCCCAAAAAGATTTaGTCGTTGCACTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIHPKKI*SLHCAV
Trigger: AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTG...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTTTGTTTAACTGGTGCTaGTCAATGCACAGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESLFNWC*SMHSVV
Trigger: CACCACACTGTGCATTGAGCAGCACCAGTTAAACAA...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTTCTGTCTCTGGCTTCTaGATAAACATATTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESSVSGF*INIFLA
Trigger: CGCCAGGAATATGTTTATCCAGAAGCCAGAGACAGA...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGTTACAACTGAAGTTGTaGAGGTGGGAGGGCTCACAA +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKLQLKL*RWEGSQ
Trigger: TTGTGAGCCCTCCCACCTCCACAACTTCAGTTGTAA...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACCCTTTGCAAGGCACCTaGAGTCTGGGTTTGTCATTT +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDPLQGT*SLGLSF
Trigger: AAATGACAAACCCAGACTCCAGGTGCCTTGCAAAGG...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCGTGTTACTCTTTTGCTaGCTCTGCAAAGAAGATGCA +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIVLLFC*LCKEDA
Trigger: TGCATCTTCTTTGCAGAGTCAGCAAAAGAGTAACAC...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTTCTTTTCATACACAATaGTCCCAAAGGAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPSFHTQ*SQRRKK
Trigger: TTTCTTCCTCCTTTGGGATCATTGTGTATGAAAAGA...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR TCA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTGTTGCTGCATTTTCATaGCTTAAGAGGTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPVAAFS*LKRSLF
Trigger: AAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAAC...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TTTCATGACTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATCTTAAGGTCCATTTCTaGCTGAGCAATTGCATCCTT +
Preference number: 4 (lower is better)
Translates to: FHDLRGLFLVVVRGMLSHLKVHF*LSNCIL
Trigger: AAGGATGCAATTGCTCAGGCAGAAATGGACCTTAAG...ATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTTAAGTCATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR GCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACACTGGTGCTGCTCAATaGACAGTGTGGTGTATAGTT +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDTGAAQ*TVWCIV
Trigger: AACTATACACCACACTGTGCATTGAGCAGCACCAGT...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGTCTGTCTCTGGCTTCTaGATAAACATATTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKSVSGF*INIFLA
Trigger: CGCCAGGAATATGTTTATCCAGAAGCCAGAGACAGA...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACCCCCGATCCTCTTCTTaGAGTTGTCGTAAAAATACA +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDPRSSS*SCRKNT
Trigger: TGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCTTCTGCCTGAGCAATTaGATCCTTGAGTTGATTGTA +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIFCLSN*ILELIV
Trigger: TACAATCAACTCAAGGATGCAATTGCTCAGGCAGAA...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACAAAAGATTTGCTCGTTaGACTGTGCTGTTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHKRFAR*TVLFLL
Trigger: AAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTT...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTAGTGTGGTGTATAGTTaGTGGACCAATGTCTTTACA +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESSVVYS*WTNVFT
Trigger: TGTAAAGACATTGGTCCAGCAACTATACACCACACT...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACTTTGGTGGTCGTACGTaGTATGTTAAGTCATTAATG +
Preference number: 4 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHFGGRT*YVKSLM
Trigger: CATTAATGACTTAACATACCACGTACGACCACCAAA...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGTCAGTAAAGGGATGCTaGAAGGAAAGATTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKSVKGC*KERFLV
Trigger: TACCAGGAATCTTTCCTTCCAGCATCCCTTTACTGA...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGCTTTCCTTGTTTAACTaGTGCTGCTCAATGCACAGT +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKLSLFN*CCSMHS
Trigger: ACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAG...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
3UTR CAA 72 bp ATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTaGCTGCATTTTCATGACTTAAGAGGTCTCTTTTTG +
Preference number: 4 (lower is better)
Translates to: IVAGPMSLHHSA*LHFHDLRGLFL
Trigger: CAAAAAGAGACCTCTTAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCGATTCAGAGGCTTTTTaGAGATCAATCTTTTTCACC +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIDSEAF*RSIFFT
Trigger: GGTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATC...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGAAACCAACAACCTCATaGAGTGTTGCCAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKKPTTS*SVASDF
Trigger: AAAATCACTGGCAACACTGCATGAGGTTGTTGGTTT...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCAGCGCAGATGTCATCTaGAAATATGGTAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVISADVI*KYGRKC
Trigger: ACATTTTCTACCATATTTCCAGATGACATCTGCGCT...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGGTGGTGTATAGTTGCTaGACCAATGTCTTTACATCA +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKVVYSC*TNVFTS
Trigger: TGATGTAAAGACATTGGTCCAGCAACTATACACCAC...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGTGGTGTATAGTTGCTaGACCAATGTCTTTACATCA +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDVVYSC*TNVFTS
Trigger: TGATGTAAAGACATTGGTCCAGCAACTATACACCAC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTAAAATATGCATACATTaGCATGGCACTTCCATAAGT +
Preference number: 4 (lower is better)
Translates to: QRRCKKRTPPALFSLYESKICIH*HGTSIS
Trigger: ACTTATGGAAGTGCCATGGCAATGTATGCATATTTT...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCAAAATATGCATACATTaGCATGGCACTTCCATAAGT +
Preference number: 4 (lower is better)
Translates to: KNRILDTDSFDSSSADVIKICIH*HGTSIS
Trigger: ACTTATGGAAGTGCCATGGCAATGTATGCATATTTT...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CCA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAGCGCAGATGTCATCTaGAAATATGGTAGAAAATGT +
Preference number: 4 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDSADVI*KYGRKC
Trigger: ACATTTTCTACCATATTTCCAGATGACATCTGCGCT...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR GCA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGTTCTTAAAAACCCTATaGACAAACAGGATAAATGGG +
Preference number: 4 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKFLKTL*TNRING
Trigger: CCCATTTATCCTGTTTGTGCATAGGGTTTTTAAGAA...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGGGAGGTCTATTCCTGTaGAAGCAGCAACGCGAACAC +
Preference number: 5 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLGGLFL*KQQREH
Trigger: GTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCC...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS TCA 90 bp GCCCTCGAAAGGACCCCCAAAAGCACCTTTAAGGACCCAAGAGGATaGAGCTTGCCTCCTGAAGCAATGCAGCATCCATCTCGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: ALERTPKSTFKDPRG*SLPPEAMQHPSRGS
Trigger: GCTCCCTCGAGATGGATGCTGCATTGCTTCAGGAGGCAAGCTTCATCCTCTTGGGTCCTTAAAGGTGCTTTTGGGGGTCCTTTCGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS GCA 90 bp GCACCTTTAAGGACCCAAGAGGATGAAGCTTGCCTCCTGAAGCAATaGAGCATCCATCTCGAGGGAGCCGGTTCCCCATGCACACACACA +
Preference number: 5 (lower is better)
Translates to: APLRTQEDEACLLKQ*SIHLEGAGSPCTHT
Trigger: TGTGTGTGTGCATGGGGAACCGGCTCCCTCGAGATGGATGCTGCATTGCTTCAGGAGGCAAGCTTCATCCTCTTGGGTCCTTAAAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AACAGAGTCAGAGATAGGCTTGAGTGTGAACTGACAGCGTTCACGCCGGGATGGGCTGGCCTTCAACCTTaGCAAGGCACCTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: NRVRDRLECELTAFTPGWAGLQP*QGTWSL
Trigger: CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGC...CCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCGCTGGCCTTCAACCTTaGCAAGGCACCTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLAGLQP*QGTWSL
Trigger: CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGC...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp TTCCCCTGCGTGAACAGGTCACATCACCAATACTTGACTCCCACAGGCCAGCTCTCACATCACCAATACTaGACTCCCACAGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: FPCVNRSHHQYLTPTGQLSHHQY*TPTGQL
Trigger: GAGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTGA...GAGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTGACCTGTTCACGCAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR CAA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATCCAATGAAAGGGGTGTaGGCAGGAGTAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHPMKGV*AGVAAA
Trigger: TGCTGCTGCTACTCCTGCCAACACCCCTTTCATTGG...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGGGAGCCAGCTGCTCTTaGAGATCCTCTAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMGASCS*RSSSLS
Trigger: TGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTCC...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS CCA 90 bp CCCACAGGCCAGCTCCACACTCTAGCAGCTAAGATGTCACTGGCATaGTACATGGAGAGTGAGGTAGAAACGGTATCTTGCCAATCACTG +
Preference number: 5 (lower is better)
Translates to: PTGQLHTLAAKMSLA*YMESEVETVSCQSL
Trigger: CAGTGATTGGCAAGATACCGTTTCTACCTCACTCTCCATGTACCATGCCAGTGACATCTTAGCTGCTAGAGTGTGGAGCTGGCCTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603649.5
ENST00000604679.5
CDS-3UTR CAA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCGGAGGTCTATTCCTGTaGAAGCAGCAACGCGAACAC +
Preference number: 5 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLGGLFL*KQQREH
Trigger: GTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCC...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGATCTTTTTCACCAATTaGTCGGAGAGGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLIFFTN*SERQMY
Trigger: GTACATCTGCCTCTCCGACAAATTGGTGAAAAAGAT...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGTGGTGTGTTACTCTTTaGCTGACTCTGCAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLWCVTL*LTLQRR
Trigger: TCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCA...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGTTACATCTTCCTGATTaGGTAGTACAGCTGAACACC +
Preference number: 5 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLLHLPD*VVQLNT
Trigger: GGTGTTCAGCTGTACTACCAAATCAGGAAGATGTAA...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AACAGAGTCAGAGATAGGCTTGAGTGTGAACTGACAGCGTTCACGCCGGGATGGGGAGCCAGCTGCTCTTaGAGATCCTCTAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: NRVRDRLECELTAFTPGWGASCS*RSSSLS
Trigger: TGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTCC...CCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTATAAAGGGCCAACCCTaGGTCTCTGGGGGATATAAC +
Preference number: 5 (lower is better)
Translates to: APKFCQEAILWCTQDASVIKGQP*VSGGYN
Trigger: GTTATATCCCCCAGAGACCAAGGGTTGGCCCTTTAT...AACACTTGCATCCTGGGTACACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR CAA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGGGATTCAGAGGCTTTTaGCAGATCAATCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLGFRGF*QINLFH
Trigger: GTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATCC...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCGTGAAGAGAGTGGGCTaGAAGGAAGCCCTAGAAATG +
Preference number: 5 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLVKRVG*KEALEM
Trigger: CATTTCTAGGGCTTCCTTCAAGCCCACTCTCTTCAC...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAGACAAGGCAGTCCCATGTGAAGAGAGTGGGCTaGAAGGAAGCCCTAGAAATG +
Preference number: 5 (lower is better)
Translates to: VEVCVLRDEQSLQTRQSHVKRVG*KEALEM
Trigger: CATTTCTAGGGCTTCCTTCAAGCCCACTCTCTTCAC...ATGGGACTGCCTTGTCTGGAGGCTTTGTTCATCTCGAAGGACACACACTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGATCTTTTTCACCAATTaGTCGGAGAGGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMIFFTN*SERQMY
Trigger: GTACATCTGCCTCTCCGACAAATTGGTGAAAAAGAT...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGTGGTGTGTTACTCTTTaGCTGACTCTGCAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMWCVTL*LTLQRR
Trigger: TCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCA...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AGCGTTCACGCCGGGATGGTAGCCTCACAGATATCACAGGTAACCCATTTTGATGATTTACAACTGAAGTaGTGGAGGTGGGAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SVHAGMVASQISQVTHFDDLQLK*WRWEGS
Trigger: TGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATC...ATCAAAATGGGTTACCTGTGATATCTGTGAGGCTACCATCCCGGCGTGAACGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCGTGAAGAGAGTGGGCTaGAAGGAAGCCCTAGAAATG +
Preference number: 5 (lower is better)
Translates to: SLASHTPQKDLLVALCCFVKRVG*KEALEM
Trigger: CATTTCTAGGGCTTCCTTCAAGCCCACTCTCTTCAC...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GCAGCAGCAGCAATCCTGGCTGGCCTTCAACCTTTGCAAGGCACCTGGAGTCTGACCTGGAGTCTGGGTTaGTCATTTAAAGTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: AAAAILAGLQPLQGTWSLTWSLG*SFKVFL
Trigger: AAGAAAAACTTTAAATGACAAACCCAGACTCCAGGT...CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGCCAGGATTGCTGCTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AACAGAGTCAGAGATAGGCTTGAGTGTGAACTGACAGCGTTCACGCCGGGATGGTTAAGAGGTCTCTTTTaGGTGGTCGTACGTGGTATG +
Preference number: 5 (lower is better)
Translates to: NRVRDRLECELTAFTPGWLRGLF*VVVRGM
Trigger: CATACCACGTACGACCACCAAAAAGAGACCTCTTAA...CCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AAGCGATCCTCTGGTGTACCCAGGATGCAAGTGTTGGTCATAATCCTTCTTTCCTCACATCACCAATACTaGACTCCCACAGGCCAGCTC +
Preference number: 5 (lower is better)
Translates to: KRSSGVPRMQVLVIILLSSHHQY*TPTGQL
Trigger: GAGCTGGCCTGTGGGAGTCAAGTATTGGTGATGTGA...GGAAAGAAGGATTATGACCAACACTTGCATCCTGGGTACACCAGAGGATCGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR CAA 90 bp TCAATAAGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGGGAGGTCTATTCCTGTaGAAGCAGCAACGCGAACAC +
Preference number: 5 (lower is better)
Translates to: SISSLSLFNWCCSMHSVVGGLFL*KQQREH
Trigger: GTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCC...CACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCTTATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GCACCCTTTGAGATCCACACACTTGATTTACAACTGAAGTTGTGGAGGTGGGAGGATTTACAACTGAAGTaGTGGAGGTGGGAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: APFEIHTLDLQLKLWRWEDLQLK*WRWEGS
Trigger: TGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATC...CTCCCACCTCCACAACTTCAGTTGTAAATCAAGTGTGTGGATCTCAAAGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTGCTGGCCTTCAACCTTaGCAAGGCACCTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPAGLQP*QGTWSL
Trigger: CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGC...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GTGTGGTGTATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATCCAATGAAAGGGGTGTaGGCAGGAGTAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: VWCIVAGPMSLHHSALLHPMKGV*AGVAAA
Trigger: TGCTGCTGCTACTCCTGCCAACACCCCTTTCATTGG...ATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTATACACCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp CCCCGATCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATAGGAGGTCTATTCCTGTaGAAGCAGCAACGCGAACAC +
Preference number: 5 (lower is better)
Translates to: PRSSSCSCRKNTPTESEIGGLFL*KQQREH
Trigger: GTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCC...TATCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGATCGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GGGCGGAGGGTCAGGAAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGTATTCACTAAGCCCTTaGAGCTTATATTCCACAATG +
Preference number: 5 (lower is better)
Translates to: GRRVRKWRHASFHSVMPMYSLSP*SLYSTM
Trigger: CATTGTGGAATATAAGCTCAAAGGGCTTAGTGAATA...CATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTTCCTGACCCTCCGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTCCAATGAAAGGGGTGTaGGCAGGAGTAGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPPMKGV*AGVAAA
Trigger: TGCTGCTGCTACTCCTGCCAACACCCCTTTCATTGG...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GTAAAGGGATGCTGGAAGGAAAGATTCCTGGTAACTCTGCAGAGACTGGGTCCATTAAGAGGTCTCTTTTaGGTGGTCGTACGTGGTATG +
Preference number: 5 (lower is better)
Translates to: VKGCWKERFLVTLQRLGPLRGLF*VVVRGM
Trigger: CATACCACGTACGACCACCAAAAAGAGACCTCTTAA...TGGACCCAGTCTCTGCAGAGTTACCAGGAATCTTTCCTTCCAGCATCCCTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTTTAAGAGGTCTCTTTTaGGTGGTCGTACGTGGTATG +
Preference number: 5 (lower is better)
Translates to: AQQCCNKQLPNSARKRSSLRGLF*VVVRGM
Trigger: CATACCACGTACGACCACCAAAAAGAGACCTCTTAA...AGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGGGTAGAAACGGTATCTaGCCAATCACTGTAGGAATG +
Preference number: 5 (lower is better)
Translates to: NSAAINSSQILPGSDPLVGRNGI*PITVGM
Trigger: CATTCCTACAGTGATTGGCAAGATACCGTTTCTACC...CACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603649.5
ENST00000604679.5
CDS GCA 90 bp TTGATAAACCACTGTAACATTCACCATCAGAGGGCACAACAGTGCTaGAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGT +
Preference number: 5 (lower is better)
Translates to: LINHCNIHHQRAQQC*NKQLPNSARKRSSG
Trigger: ACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGGTGAATGTTACAGTGGTTTATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604152.1
CDS-3UTR CAA 90 bp GGAGGGCTCACAAACAGTGTGGAAGTGTGTGTCCTTCGAGATGAACAAAGCCTCCAAAATATGCATACATaGCCATGGCACTTCCATAAG +
Preference number: 5 (lower is better)
Translates to: GGLTNSVEVCVLRDEQSLQNMHT*PWHFHK
Trigger: CTTATGGAAGTGCCATGGCAATGTATGCATATTTTG...GAGGCTTTGTTCATCTCGAAGGACACACACTTCCACACTGTTTGTGAGCCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp CCTCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTGGATTCAGAGGCTTTTaGCAGATCAATCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: PPLLPTHPKKICSLHCAVGFRGF*QINLFH
Trigger: GTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATCC...AACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp CAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTCGAACACCCCCAGCATaGTTTTCTCTTTATGAATCT +
Preference number: 5 (lower is better)
Translates to: QQCCNKQLPNSARKRSSGRTPPA*FSLYES
Trigger: AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCG...ACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCCCTTTCCCTCTGATTaGTGTTCTGGAGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHPFPSD*CSGGRG
Trigger: CCCTCTCCCTCCAGAACACAAATCAGAGGGAAAGGG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp CATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGTTACATCTTCCTGATTaGGTAGTACAGCTGAACACC +
Preference number: 5 (lower is better)
Translates to: HQRAQQCCNKQLPNSARKLHLPD*VVQLNT
Trigger: GGTGTTCAGCTGTACTACCAAATCAGGAAGATGTAA...CTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCGCTGGCCTTCAACCTTaGCAAGGCACCTGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: KNRILDTDSFDSSSADVIAGLQP*QGTWSL
Trigger: CAGACTCCAGGTGCCTTGCAAAGGTTGAAGGCCAGC...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AACAGAGTCAGAGATAGGCTTGAGTGTGAACTGACAGCGTTCACGCCGGGATGGTTACATCATTCAGCGTaGCTGCATTTTCATGACTTA +
Preference number: 5 (lower is better)
Translates to: NRVRDRLECELTAFTPGWLHHSA*LHFHDL
Trigger: TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAA...CCATCCCGGCGTGAACGCTGTCAGTTCACACTCAAGCCTATCTCTGACTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCAATCTTTTTCACCAATTaGTCGGAGAGGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: KWRHASFHSVMPMKGVLAIFFTN*SERQMY
Trigger: GTACATCTGCCTCTCCGACAAATTGGTGAAAAAGAT...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp CATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGGGATTCAGAGGCTTTTaGCAGATCAATCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: HHQRAQQCCNKQLPNSARGFRGF*QINLFH
Trigger: GTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATCC...CCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCACGAACACCCCCAGCATaGTTTTCTCTTTATGAATCT +
Preference number: 5 (lower is better)
Translates to: KWRHASFHSVMPMKGVLARTPPA*FSLYES
Trigger: AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCG...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTGATTTACAACTGAAGTaGTGGAGGTGGGAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPDLQLK*WRWEGS
Trigger: TGAGCCCTCCCACCTCCACAACTTCAGTTGTAAATC...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCGATAAATTGCACCCTTaGAGATCCACACACTTGATT +
Preference number: 5 (lower is better)
Translates to: SLASHTPQKDLLVALCCFDKLHP*RSTHLI
Trigger: AATCAAGTGTGTGGATCTCAAAGGGTGCAATTTATC...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGTTAAGAGGTCTCTTTTaGGTGGTCGTACGTGGTATG +
Preference number: 5 (lower is better)
Translates to: TMRKDESRERKGQSVVWQLRGLF*VVVRGM
Trigger: CATACCACGTACGACCACCAAAAAGAGACCTCTTAA...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AGCTCCCTTTCCTTGTTTAACTGGTGCTGCTCAATGCACAGTGTGGTGTATAGTGGTAGAAACGGTATCTaGCCAATCACTGTAGGAATG +
Preference number: 5 (lower is better)
Translates to: SSLSLFNWCCSMHSVVYSGRNGI*PITVGM
Trigger: CATTCCTACAGTGATTGGCAAGATACCGTTTCTACC...ACTATACACCACACTGTGCATTGAGCAGCACCAGTTAAACAAGGAAAGGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604679.5
CDS-3UTR CAA 90 bp TCTTTCCTAATAAGCATAAAGGGCCAACCCTTGGTCTCTGGGGGATATAACAGACCCAGGATGCAAGTGTaGGTCATAATCCTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: SFLISIKGQPLVSGGYNRPRMQV*VIILLS
Trigger: GGAAAGAAGGATTATGACCAACACTTGCATCCTGGG...TCTGTTATATCCCCCAGAGACCAAGGGTTGGCCCTTTATGCTTATTAGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000603649.5
CDS-3UTR CAA 90 bp GGAGGAGGTCTATTCCTGTTGAAGCAGCAACGCGAACACCATCTGGTGAATAGATATTCACTAAGCCCTTaGAGCTTATATTCCACAATG +
Preference number: 5 (lower is better)
Translates to: GGGLFLLKQQREHHLVNRYSLSP*SLYSTM
Trigger: CATTGTGGAATATAAGCTCAAAGGGCTTAGTGAATA...TCTATTCACCAGATGGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCACCTGGAGTCTGGGTTaGTCATTTAAAGTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: SLASHTPQKDLLVALCCFTWSLG*SFKVFL
Trigger: AAGAAAAACTTTAAATGACAAACCCAGACTCCAGGT...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AACAGTGCTGCAATAAACAGCTCCCAAATTCTGCCAGGAAGCGATCCTCTGGTGTTACATCATTCAGCGTaGCTGCATTTTCATGACTTA +
Preference number: 5 (lower is better)
Translates to: NSAAINSSQILPGSDPLVLHHSA*LHFHDL
Trigger: TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAA...CACCAGAGGATCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp TCCCTTGCTTCCCACACACCCCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTACATCATTCAGCGTaGCTGCATTTTCATGACTTA +
Preference number: 5 (lower is better)
Translates to: SLASHTPQKDLLVALCCFLHHSA*LHFHDL
Trigger: TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAA...GAAACAGCACAGTGCAACGAGCAAATCTTTTTGGGGTGTGTGGGAAGCAAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp GTTGCTGGACCAATGTCTTTACATCATTCAGCGTTGCTGCATTTTCATGACTTAGGAGCCAGCTGCTCTTaGAGATCCTCTAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: VAGPMSLHHSALLHFHDLGASCS*RSSSLS
Trigger: TGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTCC...TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGGAGGTCTATTCCTGTaGAAGCAGCAACGCGAACAC +
Preference number: 5 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDGGLFL*KQQREH
Trigger: GTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCCATCTCTACTCTTTTaGGTGGTCGTACGTGGTATG +
Preference number: 5 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHPSLLF*VVVRGM
Trigger: CATACCACGTACGACCACCAAAAAGAGTAGAGATGG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357157.10
CDS-3UTR CAA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGCAAAATATGCATACATaGCCATGGCACTTCCATAAG +
Preference number: 5 (lower is better)
Translates to: TMRKDESRERKGQSVVWQQNMHT*PWHFHK
Trigger: CTTATGGAAGTGCCATGGCAATGTATGCATATTTTG...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp ACAATGAGGAAGGATGAATCACGTGAAAGAAAAGGCCAATCAGTGGTGTGGCAGGATAAATTGCACCCTTaGAGATCCACACACTTGATT +
Preference number: 5 (lower is better)
Translates to: TMRKDESRERKGQSVVWQDKLHP*RSTHLI
Trigger: AATCAAGTGTGTGGATCTCAAAGGGTGCAATTTATC...CTGCCACACCACTGATTGGCCTTTTCTTTCACGTGATTCATCCTTCCTCATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp TCCTCTTCTTGCAGTTGTCGTAAAAATACACCAACAGAGTCAGAGATAGGCTTGTTAAGAGGTCTCTTTTaGGTGGTCGTACGTGGTATG +
Preference number: 5 (lower is better)
Translates to: SSSCSCRKNTPTESEIGLLRGLF*VVVRGM
Trigger: CATACCACGTACGACCACCAAAAAGAGACCTCTTAA...CAAGCCTATCTCTGACTCTGTTGGTGTATTTTTACGACAACTGCAAGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000604372.5
ENST00000604679.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AAGTGGAGACATGCATCCTTTCATTCCGTCATGCCAATGAAAGGGGTGTTGGCATTACATCATTCAGCGTaGCTGCATTTTCATGACTTA +
Preference number: 5 (lower is better)
Translates to: KWRHASFHSVMPMKGVLALHHSA*LHFHDL
Trigger: TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAA...TGCCAACACCCCTTTCATTGGCATGACGGAATGAAAGGATGCATGTCTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp ATAAACCACTGTAACATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCCAAAATATGCATACATaGCCATGGCACTTCCATAAG +
Preference number: 5 (lower is better)
Translates to: INHCNIIRGHNSAAINSSQNMHT*PWHFHK
Trigger: CTTATGGAAGTGCCATGGCAATGTATGCATATTTTG...GGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATGTTACAGTGGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp AGCCCTTTGAGCTTATATTCCACAATGCCTGATCCTCAGGTTTTAACATTCCCTCGAACACCCCCAGCATaGTTTTCTCTTTATGAATCT +
Preference number: 5 (lower is better)
Translates to: SPLSLYSTMPDPQVLTFPRTPPA*FSLYES
Trigger: AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCG...AGGGAATGTTAAAACCTGAGGATCAGGCATTGTGGAATATAAGCTCAAAGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACGGAGCCAGCTGCTCTTaGAGATCCTCTAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDGASCS*RSSSLS
Trigger: TGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTCC...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGGGAGCCAGCTGCTCTTaGAGATCCTCTAGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKGASCS*RSSSLS
Trigger: TGAAAGACTAGAGGATCTCAAAGAGCAGCTGGCTCC...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp CTTAAGAGGTCTCTTTTTGGTGGTCGTACGTGGTATGTTAAGTCATTAATGACCTGGTGTGTTACTCTTTaGCTGACTCTGCAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: LKRSLFGGRTWYVKSLMTWCVTL*LTLQRR
Trigger: TCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCA...GGTCATTAATGACTTAACATACCACGTACGACCACCAAAAAGAGACCTCTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACTTACATCTTCCTGATTaGGTAGTACAGCTGAACACC +
Preference number: 5 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHLHLPD*VVQLNT
Trigger: GGTGTTCAGCTGTACTACCAAATCAGGAAGATGTAA...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp ATAAACCACTGTAACATCATCAGAGGGCACAACAGTGCTGCAATAAACAGCTCCACCTGGAGTCTGGGTTaGTCATTTAAAGTTTTTCTT +
Preference number: 5 (lower is better)
Translates to: INHCNIIRGHNSAAINSSTWSLG*SFKVFL
Trigger: AAGAAAAACTTTAAATGACAAACCCAGACTCCAGGT...GGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGATGTTACAGTGGTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000605597.5
CDS-3UTR CAA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACCAAAATATGCATACATaGCCATGGCACTTCCATAAG +
Preference number: 5 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHQNMHT*PWHFHK
Trigger: CTTATGGAAGTGCCATGGCAATGTATGCATATTTTG...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp CAAAGAAGATGCAAGAAACGAACACCCCCAGCATTGTTTTCTCTTTATGAATCTATCTTTTTCACCAATTaGTCGGAGAGGCAGATGTAC +
Preference number: 5 (lower is better)
Translates to: QRRCKKRTPPALFSLYESIFFTN*SERQMY
Trigger: GTACATCTGCCTCTCCGACAAATTGGTGAAAAAGAT...AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCGTTTCTTGCATCTTCTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCCGAACACCCCCAGCATaGTTTTCTCTTTATGAATCT +
Preference number: 5 (lower is better)
Translates to: KNRILDTDSFDSSSADVIRTPPA*FSLYES
Trigger: AGATTCATAAAGAGAAAACAATGCTGGGGGTGTTCG...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCTGGTGTGTTACTCTTTaGCTGACTCTGCAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: KNRILDTDSFDSSSADVIWCVTL*LTLQRR
Trigger: TCTTCTTTGCAGAGTCAGCAAAAGAGTAACACACCA...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp CCAAAAAGATTTGCTCGTTGCACTGTGCTGTTTCTTCTTAAAAACCCTATGCACGATAAATTGCACCCTTaGAGATCCACACACTTGATT +
Preference number: 5 (lower is better)
Translates to: PKRFARCTVLFLLKNPMHDKLHP*RSTHLI
Trigger: AATCAAGTGTGTGGATCTCAAAGGGTGCAATTTATC...GTGCATAGGGTTTTTAAGAAGAAACAGCACAGTGCAACGAGCAAATCTTTTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp AAAAACAGGATATTAGACACAGATTCCTTTGACTCTTCAAGCGCAGATGTCATCGGATTCAGAGGCTTTTaGCAGATCAATCTTTTTCAC +
Preference number: 5 (lower is better)
Translates to: KNRILDTDSFDSSSADVIGFRGF*QINLFH
Trigger: GTGAAAAAGATTGATCTGCAAAAAGCCTCTGAATCC...GATGACATCTGCGCTTGAAGAGTCAAAGGAATCTGTGTCTAATATCCTGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp TTTGACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACTATTCACTAAGCCCTTaGAGCTTATATTCCACAATG +
Preference number: 5 (lower is better)
Translates to: FDSSSADVIWKYGRKCFDYSLSP*SLYSTM
Trigger: CATTGTGGAATATAAGCTCAAAGGGCTTAGTGAATA...GTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGTATTCACTAAGCCCTTaGAGCTTATATTCCACAATG +
Preference number: 5 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKYSLSP*SLYSTM
Trigger: CATTGTGGAATATAAGCTCAAAGGGCTTAGTGAATA...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357157.10
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS-3UTR CAA 90 bp ACTCTTCAAGCGCAGATGTCATCTGGAAATATGGTAGAAAATGTTTTGACAAAGTTACATCATTCAGCGTaGCTGCATTTTCATGACTTA +
Preference number: 5 (lower is better)
Translates to: TLQAQMSSGNMVENVLTKLHHSA*LHFHDL
Trigger: TAAGTCATGAAAATGCAGCAACGCTGAATGATGTAA...CTTTGTCAAAACATTTTCTACCATATTTCCAGATGACATCTGCGCTTGAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373053.7
ENST00000536019.5
ENST00000605597.5
CDS GCA 72 bp GCCCCGAGAGGAGAGGAGCAGCAGGAGCGATCTACCTaGGGCGGCCGCCATCTCTCAACTGGAAACGGCGCC +
Preference number: 6 (lower is better)
Translates to: APRGEEQQERST*GGRHLSTGNGA
Trigger: GGCGCCGTTTCCAGTTGAGAGATGGCGGCCGCCGCAGGTAGATCGCTCCTGCTGCTCCTCTCCTCTCGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373053.7
CDS TCA 72 bp GTGCCTGCTGACCACCCTTCCCGCTTCAGGCACGCGTaGACACGCTTATACAGTAGCCCTCGAAAGGACCCC +
Preference number: 6 (lower is better)
Translates to: VPADHPSRFRHA*TRLYSSPRKDP
Trigger: GGGGTCCTTTCGAGGGCTACTGTATAAGCGTGTTCACGCGTGCCTGAAGCGGGAAGGGTGGTCAGCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS GCA 72 bp AGGACCCAAGAGGATGAAGCTTGCCTCCTGAAGCAATaGAGCATCCATCTCGAGGGAGCCGGTTCCCCATGC +
Preference number: 6 (lower is better)
Translates to: RTQEDEACLLKQ*SIHLEGAGSPC
Trigger: GCATGGGGAACCGGCTCCCTCGAGATGGATGCTGCATTGCTTCAGGAGGCAAGCTTCATCCTCTTGGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS TCA 72 bp GAGACCCTCTCTGCGAATGTTCAAGTTTCCCCTGCGTaGACAGGTCACATCACCAATACCGTCCGGTGGTGC +
Preference number: 6 (lower is better)
Translates to: ETLSANVQVSPA*TGHITNTVRWC
Trigger: GCACCACCGGACGGTATTGGTGATGTGACCTGTTCACGCAGGGGAAACTTGAACATTCGCAGAGAGGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000604372.5
CDS TCA 72 bp AGGACCCCCAAAAGCACCTTTAAGGACCCAAGAGGATaGAGCTTGCCTCCTGAAGCAATGCAGCATCCATCT +
Preference number: 6 (lower is better)
Translates to: RTPKSTFKDPRG*SLPPEAMQHPS
Trigger: AGATGGATGCTGCATTGCTTCAGGAGGCAAGCTTCATCCTCTTGGGTCCTTAAAGGTGCTTTTGGGGGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536019.5
ENST00000605597.5
CDS CCA 72 bp CAGCTCCACACTCTAGCAGCTAAGATGTCACTGGCATaGTACATGGAGAGTGAGGTAGAAACGGTATCTTGC +
Preference number: 6 (lower is better)
Translates to: QLHTLAAKMSLA*YMESEVETVSC
Trigger: GCAAGATACCGTTTCTACCTCACTCTCCATGTACCATGCCAGTGACATCTTAGCTGCTAGAGTGTGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000603649.5
ENST00000604679.5
CDS GCA 72 bp CACTGTAACATTCACCATCAGAGGGCACAACAGTGCTaGAATAAACAGCTCCCAAATTCTGCCAGGAAGCGA +
Preference number: 6 (lower is better)
Translates to: HCNIHHQRAQQC*NKQLPNSARKR
Trigger: TCGCTTCCTGGCAGAATTTGGGAGCTGTTTATTGCAGCACTGTTGTGCCCTCTGATGGTGAATGTTACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000604152.1
CDS TCA 72 bp CTTAAAGTCATCAAGGAGGAGGAGGTCTATTCCTGTTaGAGCAGCAACGCGAACACCATCTGTGAAAATTTC +
Preference number: 6 (lower is better)
Translates to: LKVIKEEEVYSC*SSNANTICENF
Trigger: GAAATTTTCACAGATGGTGTTCGCGTTGCTGCTTCAACAGGAATAGACCTCCTCCTCCTTGATGACTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483185.1
CDS CAA 72 bp ATAGTTGCTGGACCAATGTCTTTACATCATTCAGCGTaGCTGCATTTTCATGACTTAAGAGGTCTGAAACAA +
Preference number: 6 (lower is better)
Translates to: IVAGPMSLHHSA*LHFHDLRGLKQ
Trigger: TTGTTTCAGACCTCTTAAGTCATGAAAATGCAGCAACGCTGAATGATGTAAAGACATTGGTCCAGCAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000603118.5