RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCTP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000140563

Ensembl transcript IDs: ENST00000357742.9, ENST00000451018.7, ENST00000456504.5, ENST00000543482.5, ENST00000556363.5, ENST00000557505.1, ENST00000557742.1, ENST00000561608.5

Found 567 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGCCCCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTaGTTCAGAGGGAGTGCCGAGATATCCACTTTACACGTGCCCAGA +
Preference number: 1 (lower is better)
Translates to: RAPRQLSSGSSRQLA*FRGSAEISTLHVPR
Trigger: TCTGGGCACGTGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGGGGCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR TCA 90 bp AGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTATGGTaGGGAGGTACGCAAAAGGGCTGGGGAGGTTACTCAAGCCATCAC +
Preference number: 1 (lower is better)
Translates to: SDLGQPGSGLPSGVW*GGTQKGWGGYSSHH
Trigger: GTGATGGCTTGAGTAACCTCCCCAGCCCTTTTGCGTACCTCCTCACCATACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 90 bp TGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGGCTGCTaGAGAGTTTCAATTCTGCATACTGCACCTTTTGAACATCAGACG +
Preference number: 1 (lower is better)
Translates to: CPRERCASSAGGCGC*RVSILHTAPFEHQT
Trigger: CGTCTGATGTTCAAAAGGTGCAGTATGCAGAATTGAAACTCTGCAGCAGCCACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 90 bp GTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGGCTaGTGCAGAGTTTCAATTCTGCATACTGCACCTTTTGAACATCAG +
Preference number: 1 (lower is better)
Translates to: VCPRERCASSAGGCG*CRVSILHTAPFEHQ
Trigger: CTGATGTTCAAAAGGTGCAGTATGCAGAATTGAAACTCTGCAGCAGCCACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 90 bp ATCTCTAGGGACCTTCCTGGGCCATCCATTGCCAGCAATGGACCCTaGTGTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCA +
Preference number: 1 (lower is better)
Translates to: ISRDLPGPSIASNGP*CRLASSTERFPKNS
Trigger: TGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGAAGGTCCCTAGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CCA 90 bp ACCTTCCTGGGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTaGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATC +
Preference number: 1 (lower is better)
Translates to: TFLGHPLPAMDPAVG*HPAPRGFPKIHIHI
Trigger: GATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR GCA 90 bp ACAGCCATAACATTGGTCTACTCAACCAAACACAATATTGGGTGCTaGTGTCCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTT +
Preference number: 1 (lower is better)
Translates to: TAITLVYSTKHNIGC*CPKSVCALESAALL
Trigger: AAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGAGTAGACCAATGTTATGGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 90 bp GAAACAGCCATAACATTGGTCTACTCAACCAAACACAATATTGGGTaGTGCTGTCCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTT +
Preference number: 1 (lower is better)
Translates to: ETAITLVYSTKHNIG*CCPKSVCALESAAL
Trigger: AAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR TCA 90 bp GAAGGCAACCAAATACTTTCATGGGACCCTCATTTTTCAAGTGAGTaGTCTCTAGGGACCTTCCTGGGCCATCCATTGCCAGCAATGGAC +
Preference number: 1 (lower is better)
Translates to: EGNQILSWDPHFSSE*SLGTFLGHPLPAMD
Trigger: GTCCATTGCTGGCAATGGATGGCCCAGGAAGGTCCCTAGAGATCACTCACTTGAAAAATGAGGGTCCCATGAAAGTATTTGGTTGCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR TCA 90 bp AGGCATAATGTAACTGGCATCATGGCCGTGACGTCTGAGAGGTTATaGAGGCCTCCACTTGGGTGGTGGAAATCAGAACAGAAGTGGTTA +
Preference number: 1 (lower is better)
Translates to: RHNVTGIMAVTSERL*RPPLGWWKSEQKWL
Trigger: TAACCACTTCTGTTCTGATTTCCACCACCCAAGTGGAGGCCTTCATAACCTCTCAGACGTCACGGCCATGATGCCAGTTACATTATGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR TCA 90 bp GGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTACCACTaGAACAGCCATAACATTGGTCTACTCAACCAAACACAATATTGG +
Preference number: 1 (lower is better)
Translates to: GCHRACISEGHLGYH*NSHNIGLLNQTQYW
Trigger: CCAATATTGTGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CCA 90 bp GTCACTCTTGAATCCAAGTGGGCTCCTGGCTGTTCTCAAGGAAGGTaGTGTTCAGATCCATGGCAGCCTTGTTATCTCCTATTTCAGAAT +
Preference number: 1 (lower is better)
Translates to: VTLESKWAPGCSQGR*CSDPWQPCYLLFQN
Trigger: ATTCTGAAATAGGAGATAACAAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACTTGGATTCAAGAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CCA 90 bp TGTTGGAGGTGTGAAAACAAGTTCAAAGTCACTCTTGAATCCAAGTaGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGG +
Preference number: 1 (lower is better)
Translates to: CWRCENKFKVTLESK*APGCSQGRWCSDPW
Trigger: CCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACTTGGATTCAAGAGTGACTTTGAACTTGTTTTCACACCTCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR TCA 90 bp ACAGGACTAACTAAGCCTCTTTGGGGCAGGAGACTTTGGAAGTGTTaGAGGAGAGTAGAATCTATTCAGAAAGAAACAACTGGGGGCAGG +
Preference number: 1 (lower is better)
Translates to: TGLTKPLWGRRLWKC*RRVESIQKETTGGR
Trigger: CCTGCCCCCAGTTGTTTCTTTCTGAATAGATTCTACTCTCCTTCAACACTTCCAAAGTCTCCTGCCCCAAAGAGGCTTAGTTAGTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR TCA 90 bp TCCATTACCTTGCTGACATTCCTATTTGGATGCTTTTCAGTCACCTaGGATTCAGCGCTAAAACTGGACTCCTGTGGTCCTCTCACAGCA +
Preference number: 1 (lower is better)
Translates to: SITLLTFLFGCFSVT*DSALKLDSCGPLTA
Trigger: TGCTGTGAGAGGACCACAGGAGTCCAGTTTTAGCGCTGAATCTCAGGTGACTGAAAAGCATCCAAATAGGAATGTCAGCAAGGTAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR GCA 90 bp ATGGCAGGGAAATACTGTGGAATGATGAGGTCTGCAGGAGACAGATaGTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATGGGG +
Preference number: 1 (lower is better)
Translates to: MAGKYCGMMRSAGDR*YQMRTLGWYFLEMG
Trigger: CCCCATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCAGACCTCATCATTCCACAGTATTTCCCTGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CCA 90 bp TATTCAAGGTTGATTCGGTCCTGCTCTTACGTCCCAGCTGGTGTTTaGGTCCTAAACTTAACACTGAGAATTTCAATCGGGCTACAGAGG +
Preference number: 1 (lower is better)
Translates to: YSRLIRSCSYVPAGV*VLNLTLRISIGLQR
Trigger: CCTCTGTAGCCCGATTGAAATTCTCAGTGTTAAGTTTAGGACCCAAACACCAGCTGGGACGTAAGAGCAGGACCGAATCAACCTTGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CCA 90 bp GTGGTGTTCAGATCCATGGCAGCCTTGTTATCTCCTATTTCAGAATaGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTCGCTGG +
Preference number: 1 (lower is better)
Translates to: VVFRSMAALLSPISE*MLVFHSLGVVAFRW
Trigger: CCAGCGAAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGATAACAAGGCTGCCATGGATCTGAACACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR TCA 90 bp ATACAAAATGATGGTGGCTGCTGCCAGAATCAAACAGGCCAGAGATaGAAGGAAGGGGACCGTCCAGTTAAATGTGTTCTTAATCCTTTC +
Preference number: 1 (lower is better)
Translates to: IQNDGGCCQNQTGQR*KEGDRPVKCVLNPF
Trigger: GAAAGGATTAAGAACACATTTAACTGGACGGTCCCCTTCCTTTCATCTCTGGCCTGTTTGATTCTGGCAGCAGCCACCATCATTTTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 90 bp TCAGGATTTTTACATGGCAGGGAAATACTGTGGAATGATGAGGTCTaGAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTT +
Preference number: 1 (lower is better)
Translates to: SGFLHGREILWNDEV*RRQMLSNEDSGVVF
Trigger: AAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCAGACCTCATCATTCCACAGTATTTCCCTGCCATGTAAAAATCCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR GCA 90 bp CTGCCGCTAAGAGATCTGCTGCCTTTAAAACCTTCACTTGTAGAATaGCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATC +
Preference number: 1 (lower is better)
Translates to: LPLRDLLPLKPSLVE*RRLSHLSGSSVSNI
Trigger: GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAGTGAAGGTTTTAAAGGCAGCAGATCTCTTAGCGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR TCA 90 bp GGCTTGTTGCCAGGGTGCTTCCAAACTGTCAAACCATTAAGGTCATaGTTCTGTACTTATGTGATCTCAGCGGCATTTGATATTATTGAC +
Preference number: 1 (lower is better)
Translates to: GLLPGCFQTVKPLRS*FCTYVISAAFDIID
Trigger: GTCAATAATATCAAATGCCGCTGAGATCACATAAGTACAGAATCATGACCTTAATGGTTTGACAGTTTGGAAGCACCCTGGCAACAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CCA 90 bp TATATACGCACAAAGTCAGGATTTTTACATGGCAGGGAAATACTGTaGAATGATGAGGTCTGCAGGAGACAGATGCTATCAAATGAGGAC +
Preference number: 1 (lower is better)
Translates to: YIRTKSGFLHGREIL*NDEVCRRQMLSNED
Trigger: GTCCTCATTTGATAGCATCTGTCTCCTGCAGACCTCATCATTCCACAGTATTTCCCTGCCATGTAAAAATCCTGACTTTGTGCGTATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR TCA 90 bp ATACAAAGATTTGCAGTCGGGAGACTTGATTTCTCCTCCCATGGCTaGCATTACCAATTTGATCAAGGACAAGTCCCTTTACAAATGAGA +
Preference number: 1 (lower is better)
Translates to: IQRFAVGRLDFSSHG*HYQFDQGQVPLQMR
Trigger: TCTCATTTGTAAAGGGACTTGTCCTTGATCAAATTGGTAATGTCAGCCATGGGAGGAGAAATCAAGTCTCCCGACTGCAAATCTTTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
3UTR CCA 90 bp TTCTTCCCTTCCAACAAAGTTATACTTATAATCCCGTTCCAGAGTTaGTTCTTTTTCAAGGACTCAGAGAGCCGTAGGTTGCGTATCAAA +
Preference number: 1 (lower is better)
Translates to: FFPSNKVILIIPFQS*FFFKDSESRRLRIK
Trigger: TTTGATACGCAACCTACGGCTCTCTGAGTCCTTGAAAAAGAACCAACTCTGGAACGGGATTATAAGTATAACTTTGTTGGAAGGGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 90 bp AACAATTGTTTTCTATATACAGTTTATTCAAGGTTGATTCGGTCCTaGTCTTACGTCCCAGCTGGTGTTTGGGTCCTAAACTTAACACTG +
Preference number: 1 (lower is better)
Translates to: NNCFLYTVYSRLIRS*SYVPAGVWVLNLTL
Trigger: CAGTGTTAAGTTTAGGACCCAAACACCAGCTGGGACGTAAGAGCAGGACCGAATCAACCTTGAATAAACTGTATATAGAAAACAATTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR GCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATaGTTCCTCCTGAGACATTCTTCCCTTCCAACAAAGTTATACTTA +
Preference number: 1 (lower is better)
Translates to: YTSDLPVLTGQTSLS*FLLRHSSLPTKLYL
Trigger: TAAGTATAACTTTGTTGGAAGGGAAGAATGTCTCAGGAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 90 bp TTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTCCTATTTaGATGCTTTTCAGTCACCTGAGATTCAGCGCTAAAACTGGACTC +
Preference number: 1 (lower is better)
Translates to: FSENYIFHYLADIPI*MLFSHLRFSAKTGL
Trigger: GAGTCCAGTTTTAGCGCTGAATCTCAGGTGACTGAAAAGCATCCAAATAGGAATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CCA 90 bp TTGATCAAGGCTTTGGATTGGCAATACAACTATCTCATCCCATACTaGGTTCAAGTTCTTATATATGACTTTACTTTTGTACAGCGTCTT +
Preference number: 1 (lower is better)
Translates to: LIKALDWQYNYLIPY*VQVLIYDFTFVQRL
Trigger: AAGACGCTGTACAAAAGTAAAGTCATATATAAGAACTTGAACCCAGTATGGGATGAGATAGTTGTATTGCCAATCCAAAGCCTTGATCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 90 bp AGAAGCAAGACAATGAGGCATTGTTTACACAGAAGATTGAGTAACTaGTTTAACAAAAGAGGTTCTTGGGTATCTATTGTATGTACAACT +
Preference number: 1 (lower is better)
Translates to: RSKTMRHCLHRRLSN*FNKRGSWVSIVCTT
Trigger: AGTTGTACATACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTACTCAATCTTCTGTGTAAACAATGCCTCATTGTCTTGCTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 90 bp GAGAGCCCCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTaGCTTCAGAGGGAGTGCCGAGATATCCACTTTACACGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: ESPQTAVQWQLQAVG*LQRECRDIHFTRAQ
Trigger: CTGGGCACGTGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGGGGCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGATCCTGGGCCATCCATTaGCAGCAATGGACCCTGCTG +
Preference number: 2 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRSWAIH*QQWTLL
Trigger: CAGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGA...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGCAGCTCCAGGCAGTTaGCTTGCTTCAGAGGGAGTG +
Preference number: 2 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRAAPGS*LASEGV
Trigger: CACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGC...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR TCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGATGCTTTTCGCTGGGCTaGCCCTCTACGCAACTAGGA +
Preference number: 2 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRCFSLG*PSTQLG
Trigger: TCCTAGTTGCGTAGAGGGTCAGCCCAGCGAAAAGCA...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR GCA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGAACTGTTCCTGCCACTaGGGATTTGCACTCTTACAC +
Preference number: 2 (lower is better)
Translates to: PKSVCALESAALLPQGAVNCSCH*GFALLH
Trigger: GTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTT...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGGGGCTGTGGCTGCTaGAGAGTTTCAATTCTGCAT +
Preference number: 2 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRGGCGC*RVSILH
Trigger: ATGCAGAATTGAAACTCTGCAGCAGCCACAGCCCCC...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CAA 90 bp ATAAGGAGAGCCCCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTaGGCTTGCTTCAGAGGGAGTGCCGAGATATCCACTTTACACGTG +
Preference number: 2 (lower is better)
Translates to: IRRAPRQLSSGSSRQ*ACFRGSAEISTLHV
Trigger: CACGTGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGGGGCTCTCCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTGCCAGCAATGGACCCTaGTGTAGGCTGGCATCCAGC +
Preference number: 2 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGASNGP*CRLASS
Trigger: GCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGC...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGTGTTCTCAAGGAAGGTaGTGTTCAGATCCATGGCAG +
Preference number: 2 (lower is better)
Translates to: PSIASNGPCCRLASSTERCSQGR*CSDPWQ
Trigger: CTGCCATGGATCTGAACACCACCTTCCTTGAGAACA...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR TCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGACATTTTTCAAGTGAGTaGTCTCTAGGGACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRHFSSE*SLGTFL
Trigger: CAGGAAGGTCCCTAGAGATCACTCACTTGAAAAATG...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR GCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAAAACACAATATTGGGTaGTGCTGTCCAAAGTCGGTG +
Preference number: 2 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRKHNIG*CCPKSV
Trigger: CACCGACTTTGGACAGCAGCACCCAATATTGTGTTT...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTATCCAAGTGGGCTCCTaGCTGTTCTCAAGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLIQVGS*LFSRKV
Trigger: CACCTTCCTTGAGAACAGCCAGGAGCCCACTTGGAT...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTGGTACGCAAAAGGGCTaGGGAGGTTACTCAAGCCAT +
Preference number: 2 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLGTQKG*GGYSSH
Trigger: ATGGCTTGAGTAACCTCCCCAGCCCTTTTGCGTACC...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR TCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAAGTCTGTTGGAGGTGTaGAAACAAGTTCAAAGTCAC +
Preference number: 2 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRSLLEV*KQVQSH
Trigger: GTGACTTTGAACTTGTTTTCACACCTCCAACAGACT...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR TCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTTGTCCTGGATGCTGCTaGCCTTGCCTTTCACAGGTC +
Preference number: 2 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGCPGCC*PCLSQV
Trigger: GACCTGTGAAAGGCAAGGTCAGCAGCATCCAGGACA...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGACAAACATCTCTGTCATaGTTCCTCCTGAGACATTCT +
Preference number: 2 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRQTSLS*FLLRHS
Trigger: AGAATGTCTCAGGAGGAAGCATGACAGAGATGTTTG...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR TCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTGTATGTCTGTGCACGTaGAGGAGGAGGAAGTATACA +
Preference number: 2 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLVCLCT*RRRKYT
Trigger: TGTATACTTCCTCCTCCTTCACGTGCACAGACATAC...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR TCA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCAACTGAGAGCCATCCTTaGCTCTACGCTCCCTCATCC +
Preference number: 2 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPTESHP*LYAPSS
Trigger: GGATGAGGGAGCGTAGAGTCAAGGATGGCTCTCAGT...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTGCATACTGCACCTTTTaGACATCAGACGGTACCCTA +
Preference number: 2 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLAYCTF*TSDGTL
Trigger: TAGGGTACCGTCTGATGTTCAAAAGGTGCAGTATGC...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTGGGTGCCACAGGGCATaGATTTCAGAAGGACACCTT +
Preference number: 2 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGGCHRA*ISEGHL
Trigger: AAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCC...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR GCA 90 bp AGACGGTATGCGTCTGAAGTCGGTCATTGCCTAACTCCAACAAGCAAAATGGGTTCCTGGGCCATCCATTaGCAGCAATGGACCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RRYASEVGHCLTPTSKMGSWAIH*QQWTLL
Trigger: CAGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGA...ACCCATTTTGCTTGTTGGAGTTAGGCAATGACCGACTTCAGACGCATACCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTTCTGCAGGAGACAGATaGTATCAAATGAGGACTCTG +
Preference number: 2 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLSAGDR*YQMRTL
Trigger: CAGAGTCCTCATTTGATAGCATCTGTCTCCTGCAGA...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTTGGTGTTCAGATCCATaGCAGCCTTGTTATCTCCTA +
Preference number: 2 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLWCSDP*QPCYLL
Trigger: TAGGAGATAACAAGGCTGCCATGGATCTGAACACCA...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR TCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGTCCAGCCCTCTGTTCTaGAAGCAGCACATGAAAAGG +
Preference number: 2 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVSSPLF*KQHMKR
Trigger: CCTTTTCATGTGCTGCTTTCAGAACAGAGGGCTGGA...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR GCA 90 bp TCAACCAAACACAATATTGGGTGCTGCTGTCCAAAGTCGGTGTGTGCCCTAGAGCAGAGAGCCGTAGGTTaGGTATCAAAGAGGACTTGC +
Preference number: 2 (lower is better)
Translates to: STKHNIGCCCPKSVCALEQRAVG*VSKRTC
Trigger: GCAAGTCCTCTTTGATACGCAACCTACGGCTCTCTG...CTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp TCTTTCAGGGAGTTCTGTAAGCAATATCGCTGGGTAATCTGCTTTCTTTCGCTGTCCAGGCAGTTGGCTTaGTTCAGAGGGAGTGCCGAG +
Preference number: 2 (lower is better)
Translates to: SFREFCKQYRWVICFLSLSRQLA*FRGSAE
Trigger: CTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGA...CAGCGAAAGAAAGCAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTACTCTTGAATCCAAGTaGGCTCCTGGCTGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGTLESK*APGCSQ
Trigger: TTGAGAACAGCCAGGAGCCCACTTGGATTCAAGAGT...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR GCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGCACAATATTGGGTGCTaGTGTCCAAAGTCGGTGTGT +
Preference number: 2 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVHNIGC*CPKSVC
Trigger: ACACACCGACTTTGGACAGCAGCACCCAATATTGTG...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR GCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTAAACACAATATTGGGTaGTGCTGTCCAAAGTCGGTG +
Preference number: 2 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGKHNIG*CCPKSV
Trigger: CACCGACTTTGGACAGCAGCACCCAATATTGTGTTT...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCAATGAAGGCCTCCACTTaGGTGGTGGAAATCAGAACA +
Preference number: 2 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPMKAST*VVEIRT
Trigger: TGTTCTGATTTCCACCACCCAAGTGGAGGCCTTCAT...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTGCTCATTATTGTCGATaGAATAGGGATTTCGAAGCT +
Preference number: 2 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLAHYCR*NRDFEA
Trigger: AGCTTCGAAATCCCTATTCCATCGACAATAATGAGC...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR TCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATTGCTTTTCGCTGGGCTaGCCCTCTACGCAACTAGGA +
Preference number: 2 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNCFSLG*PSTQLG
Trigger: TCCTAGTTGCGTAGAGGGTCAGCCCAGCGAAAAGCA...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR GCA 90 bp AGACGGTATGCGTCTGAAGTCGGTCATTGCCTAACTCCAACAAGCAAAATGGGTCACAATATTGGGTGCTaGTGTCCAAAGTCGGTGTGT +
Preference number: 2 (lower is better)
Translates to: RRYASEVGHCLTPTSKMGHNIGC*CPKSVC
Trigger: ACACACCGACTTTGGACAGCAGCACCCAATATTGTG...ACCCATTTTGCTTGTTGGAGTTAGGCAATGACCGACTTCAGACGCATACCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTGCCAGCAATGGACCCTaGTGTAGGCTGGCATCCAGC +
Preference number: 2 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGASNGP*CRLASS
Trigger: GCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGC...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR GCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTACTGAGAATGACAAATaGAGAACCCATGAAATCAGA +
Preference number: 2 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLTENDK*RTHEIR
Trigger: TCTGATTTCATGGGTTCTGCATTTGTCATTCTCAGT...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp TCTTTCAGGGAGTTCTGTAAGCAATATCGCTGGGTAATCTGCTTTCTTTCGCTGATCCAAGTGGGCTCCTaGCTGTTCTCAAGGAAGGTG +
Preference number: 2 (lower is better)
Translates to: SFREFCKQYRWVICFLSLIQVGS*LFSRKV
Trigger: CACCTTCCTTGAGAACAGCCAGGAGCCCACTTGGAT...CAGCGAAAGAAAGCAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTAATCTGAAAGGAGTGTaGGGCTGGGGAGCGGAAATA +
Preference number: 2 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILNLKGV*GWGAEI
Trigger: TATTTCCGCTCCCCAGCCCCACACTCCTTTCAGATT...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGATGAGGACTCTGGGGTaGTATTTTCTAGAAATGGGG +
Preference number: 2 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVMRTLG*YFLEMG
Trigger: CCCCATTTCTAGAAAATACCACCCCAGAGTCCTCAT...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGAATCATGCAGAATTCTaGCTCAGCCAGAAAGCAACC +
Preference number: 2 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVNHAEF*LSQKAT
Trigger: GGTTGCTTTCTGGCTGAGCCAGAATTCTGCATGATT...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCTACTCAAGCCATCACTaGCTTCCCCCGGTACCTTCC +
Preference number: 2 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRYSSHH*LPPVPS
Trigger: GGAAGGTACCGGGGGAAGCCAGTGATGGCTTGAGTA...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR TCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGGTTCAAAGTCACTCTTaGATCCAAGTGGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: RHLILLTTSAFLQYALPLVQSHS*IQVGSW
Trigger: CCAGGAGCCCACTTGGATTCAAGAGTGACTTTGAAC...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp AGACGGTATGCGTCTGAAGTCGGTCATTGCCTAACTCCAACAAGCAAAATGGGTACAGATGCTATCAAATaGGGACTCTGGGGTGGTATT +
Preference number: 2 (lower is better)
Translates to: RRYASEVGHCLTPTSKMGTDAIK*GLWGGI
Trigger: AATACCACCCCAGAGTCCTCATTTGATAGCATCTGT...ACCCATTTTGCTTGTTGGAGTTAGGCAATGACCGACTTCAGACGCATACCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR TCA 90 bp CGGTGTCTCTTGAAATCACCCTGTTTTACCACTAGGTTCAAATTTAACACGATCCCTTCAGGTGTATGGTaGGGAGGTACGCAAAAGGGC +
Preference number: 2 (lower is better)
Translates to: RCLLKSPCFTTRFKFNTIPSGVW*GGTQKG
Trigger: GCCCTTTTGCGTACCTCCTCACCATACACCTGAAGG...GATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGAACCAAACACAATATTaGGTGCTGCTGTCCAAAGTC +
Preference number: 2 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVNQTQY*VLLSKV
Trigger: GACTTTGGACAGCAGCACCCAATATTGTGTTTGGTT...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATGTTGTTGCTTTTCGCTaGGCTGACCCTCTACGCAAC +
Preference number: 2 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNVVAFR*ADPLRN
Trigger: GTTGCGTAGAGGGTCAGCCCAGCGAAAAGCAACAAC...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCGTTGTTGCTTTTCGCTaGGCTGACCCTCTACGCAAC +
Preference number: 2 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLVVAFR*ADPLRN
Trigger: GTTGCGTAGAGGGTCAGCCCAGCGAAAAGCAACAAC...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTGACCCTGCTGTAGGCTaGCATCCAGCACCGAGAGGT +
Preference number: 2 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELDPAVG*HPAPRG
Trigger: ACCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTC...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCCTAGGCTTTAGGGGTTaGGAGACGAGGACAACAGCA +
Preference number: 2 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRLGFRG*ETRTTA
Trigger: TGCTGTTGTCCTCGTCTCCCAACCCCTAAAGCCTAG...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAACCTCCACTTGGGTGGTaGAAATCAGAACAGAAGTGG +
Preference number: 2 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQPPLGW*KSEQKW
Trigger: CCACTTCTGTTCTGATTTCCACCACCCAAGTGGAGG...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATCAGAAAGAAACAACTaGGGGCAGGTCCTTCCAGTC +
Preference number: 2 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQSERNN*GQVLPV
Trigger: GACTGGAAGGACCTGCCCCCAGTTGTTTCTTTCTGA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTTGTAAGCAATATCGCTaGGTAATCTGCTTTCTTTCG +
Preference number: 2 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGCKQYR*VICFLS
Trigger: CGAAAGAAAGCAGATTACCCAGCGATATTGCTTACA...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CAA 90 bp GCATTTCAGAAGGACACCTTGGGTACCACTGAAACAGCCATAACATaGGTCTACTCAACCAAACACAATATTGGGTGCTGCTGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: AFQKDTLGTTETAIT*VYSTKHNIGCCCPK
Trigger: CTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTTCTGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CAA 90 bp TTATTCAAGGTTGATTCGGTCCTGCTCTTACGTCCCAGCTGGTGTTaGGGTCCTAAACTTAACACTGAGAATTTCAATCGGGCTACAGAG +
Preference number: 2 (lower is better)
Translates to: LFKVDSVLLLRPSWC*GPKLNTENFNRATE
Trigger: CTCTGTAGCCCGATTGAAATTCTCAGTGTTAAGTTTAGGACCCAAACACCAGCTGGGACGTAAGAGCAGGACCGAATCAACCTTGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp TCAACCAAACACAATATTGGGTGCTGCTGTCCAAAGTCGGTGTGTGCCCTAGAGCAAAATTCCAGACAGTaGTCAAAAATACCGCGAATG +
Preference number: 2 (lower is better)
Translates to: STKHNIGCCCPKSVCALEQNSRQ*SKIPRM
Trigger: CATTCGCGGTATTTTTGATCACTGTCTGGAATTTTG...CTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCCAACTAGGACACCCATaGATGAGGGTGTGTGCACAT +
Preference number: 2 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRQLGHP*MRVCAH
Trigger: ATGTGCACACACCCTCATGCATGGGTGTCCTAGTTG...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR GCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCTTCCTCCTCCAGAAATaGATCAACTCCTGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLFLLQK*INSCWP
Trigger: TGGCCAGCAGGAGTTGATGCATTTCTGGAGGAGGAA...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATGGAGATTATGAGGGTTaGGGTTCTGAAGACAGGGAG +
Preference number: 2 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNGDYEG*GSEDRE
Trigger: CTCCCTGTCTTCAGAACCCCAACCCTCATAATCTCC...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCAGCCTCTTATGATGTATaGCAGATGCCAGAAAGATAT +
Preference number: 2 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPASYDV*QMPERY
Trigger: ATATCTTTCTGGCATCTGCCATACATCATAAGAGGC...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 90 bp TCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTaGTTATCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTT +
Preference number: 2 (lower is better)
Translates to: SWLFSRKVVFRSMAA*LSPISEWMLVFHSL
Trigger: AAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGATAACAAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR TCA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAACATTTTTCAAGTGAGTaGTCTCTAGGGACCTTCCTG +
Preference number: 2 (lower is better)
Translates to: KDTLGTTETAITLVYSTKHFSSE*SLGTFL
Trigger: CAGGAAGGTCCCTAGAGATCACTCACTTGAAAAATG...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR TCA 90 bp ACAGAAGCAGAACCACATAACATTCAGAAATCAGATTCACCAATGATCATGACTTGCAGTCGGGAGACTTaGTTTCTCCTCCCATGGCTG +
Preference number: 2 (lower is better)
Translates to: TEAEPHNIQKSDSPMIMTCSRET*FLLPWL
Trigger: CAGCCATGGGAGGAGAAATCAAGTCTCCCGACTGCA...AGTCATGATCATTGGTGAATCTGATTTCTGAATGTTATGTGGTTCTGCTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
3UTR-3UTR GCA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCTATCCACTTTACACGTaGCCAGACGTTCCTCATGCT +
Preference number: 2 (lower is better)
Translates to: LVECRRLSHLSGSSVSNIYPLYT*PDVPHA
Trigger: AGCATGAGGAACGTCTGGGCACGTGTAAAGTGGATA...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAATATCGCTGGGTAATCTaGTTTCTTTCGCTGAGGTCT +
Preference number: 2 (lower is better)
Translates to: KDTLGTTETAITLVYSTKYRWVI*FLSLRS
Trigger: AGACCTCAGCGAAAGAAAGCAGATTACCCAGCGATA...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGGCAGGGGGCTGTGGCTaGTGCAGAGTTTCAATTCTG +
Preference number: 2 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRAGGCG*CRVSIL
Trigger: CAGAATTGAAACTCTGCAGCAGCCACAGCCCCCTGC...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTAACCAAACACAATATTaGGTGCTGCTGTCCAAAGTC +
Preference number: 2 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILNQTQY*VLLSKV
Trigger: GACTTTGGACAGCAGCACCCAATATTGTGTTTGGTT...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATTGTTCTCAAGGAAGGTaGTGTTCAGATCCATGGCAG +
Preference number: 2 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNCSQGR*CSDPWQ
Trigger: CTGCCATGGATCTGAACACCACCTTCCTTGAGAACA...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp TCAAAAATACCGCGAATGCTATTGTACTTCTTAATGTGGATTCCCACTGGAAGCGGCAGGGAAATACTGTaGAATGATGAGGTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: SKIPRMLLYFLMWIPTGSGREIL*NDEVCR
Trigger: CCTGCAGACCTCATCATTCCACAGTATTTCCCTGCC...GCTTCCAGTGGGAATCCACATTAAGAAGTACAATAGCATTCGCGGTATTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAAGGAACCAGGAAAACTTaGCAAGACTTCAACATCCCT +
Preference number: 2 (lower is better)
Translates to: KDTLGTTETAITLVYSTKGTRKT*QDFNIP
Trigger: AGGGATGTTGAAGTCTTGCCAAGTTTTCCTGGTTCC...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATCTAACTAAGCCTCTTTaGGGCAGGAGACTTTGGAAG +
Preference number: 2 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNLTKPL*GRRLWK
Trigger: CTTCCAAAGTCTCCTGCCCCAAAGAGGCTTAGTTAG...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp TCAACCAAACACAATATTGGGTGCTGCTGTCCAAAGTCGGTGTGTGCCCTAGAGATCAAGGCTTTGGATTaGCAATACAACTATCTCATC +
Preference number: 2 (lower is better)
Translates to: STKHNIGCCCPKSVCALEIKALD*QYNYLI
Trigger: GATGAGATAGTTGTATTGCCAATCCAAAGCCTTGAT...CTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR TCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGAGTCTGTTGGAGGTGTaGAAACAAGTTCAAAGTCAC +
Preference number: 2 (lower is better)
Translates to: RHLILLTTSAFLQYALPLSLLEV*KQVQSH
Trigger: GTGACTTTGAACTTGTTTTCACACCTCCAACAGACT...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATACAGATGCTATCAAATaGGGACTCTGGGGTGGTATT +
Preference number: 2 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNTDAIK*GLWGGI
Trigger: AATACCACCCCAGAGTCCTCATTTGATAGCATCTGT...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR GCA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCTCCCCTACCCCCACCTaGCTTTCTGAAATTATATGT +
Preference number: 2 (lower is better)
Translates to: LVECRRLSHLSGSSVSNISPTPT*LSEIIC
Trigger: ACATATAATTTCAGAAAGGCAGGTGGGGGTAGGGGA...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp TCAAAAATACCGCGAATGCTATTGTACTTCTTAATGTGGATTCCCACTGGAAGCCTGCCACTGCGGATTTaGACTCTTACACAGTGTCTT +
Preference number: 2 (lower is better)
Translates to: SKIPRMLLYFLMWIPTGSLPLRI*TLTQCL
Trigger: AAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAG...GCTTCCAGTGGGAATCCACATTAAGAAGTACAATAGCATTCGCGGTATTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAACTTCAATGTCCAAAATaGCCATCCTGTCAGAGAAGT +
Preference number: 2 (lower is better)
Translates to: KDTLGTTETAITLVYSTKLQCPK*PSCQRS
Trigger: ACTTCTCTGACAGGATGGGCATTTTGGACATTGAAG...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp CCACACTTCAATGTCCAAAATGCCCATCCTGTCAGAGAAGTAGTGAAAGTCAAATCAAAGAGGACTTGCTaGCACTTAATCGCTTCCGAT +
Preference number: 2 (lower is better)
Translates to: PHFNVQNAHPVREVVKVKSKRTC*HLIASD
Trigger: ATCGGAAGCGATTAAGTGCCAGCAAGTCCTCTTTGA...TTTGACTTTCACTACTTCTCTGACAGGATGGGCATTTTGGACATTGAAGTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR TCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTCACCTTGGGTACCACTaGAACAGCCATAACATTGGT +
Preference number: 2 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFHLGYH*NSHNIG
Trigger: ACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTG...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR TCA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTGTATGTCTGTGCACGTaGAGGAGGAGGAAGTATACA +
Preference number: 2 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGVCLCT*RRRKYT
Trigger: TGTATACTTCCTCCTCCTTCACGTGCACAGACATAC...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAACCCCACCTGCCTTTCTaGAATTATATGTTGACATTT +
Preference number: 2 (lower is better)
Translates to: KDTLGTTETAITLVYSTKPHLPF*NYMLTF
Trigger: AAATGTCAACATATAATTTCAGAAAGGCAGGTGGGG...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR TCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGTGGCATGCTGTTGCTTaGAAGTATCTGTTTAATGTC +
Preference number: 2 (lower is better)
Translates to: RHLILLTTSAFLQYALPLWHAVA*KYLFNV
Trigger: GACATTAAACAGATACTTTCAAGCAACAGCATGCCA...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR GCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATCCTTCACTTGTAGAATaGCGACGTCTTTCACATCTT +
Preference number: 2 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNPSLVE*RRLSHL
Trigger: AAGATGTGAAAGACGTCGGCATTCTACAAGTGAAGG...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTAATCTGAAAGGAGTGTaGGGCTGGGGAGCGGAAATA +
Preference number: 2 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELNLKGV*GWGAEI
Trigger: TATTTCCGCTCCCCAGCCCCACACTCCTTTCAGATT...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 90 bp GTAACTGTGCAGGTTTGTTACATAGGTAAACTGTGTCAGAGAGGCTaGTCATACAGATTATTTCATCGCCCATGTATTAAGCCTGGTACT +
Preference number: 2 (lower is better)
Translates to: VTVQVCYIGKLCQRG*SYRLFHRPCIKPGT
Trigger: AGTACCAGGCTTAATACATGGGCGATGAAATAATCTGTATGACAAGCCTCTCTGACACAGTTTACCTATGTAACAAACCTGCACAGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTACCAACGGTGTCTCTTaGAATCACCCTGTTTTACCA +
Preference number: 2 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFTNGVS*NHPVLP
Trigger: TGGTAAAACAGGGTGATTTCAAGAGACACCGTTGGT...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR GCA 90 bp CACAGAAGATTGAGTAACTGGTTTAACAAAAGAGGTTCTTGGGTATCTATTGTACAACTAGGACACCCATaGATGAGGGTGTGTGCACAT +
Preference number: 2 (lower is better)
Translates to: HRRLSNWFNKRGSWVSIVQLGHP*MRVCAH
Trigger: ATGTGCACACACCCTCATGCATGGGTGTCCTAGTTG...TACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTACTCAATCTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGACTCTTGAATCCAAGTaGGCTCCTGGCTGTTCTCAA +
Preference number: 2 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRTLESK*APGCSQ
Trigger: TTGAGAACAGCCAGGAGCCCACTTGGATTCAAGAGT...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTAACCAAATACTTTCATaGGACCCTCATTTTTCAAGT +
Preference number: 2 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILNQILS*DPHFSS
Trigger: ACTTGAAAAATGAGGGTCCCATGAAAGTATTTGGTT...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CCA 90 bp GGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTTTATAGGCAGGGAAATACTGTaGAATGATGAGGTCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GSWVSIVCTTTRFTGAFIGREIL*NDEVCR
Trigger: CCTGCAGACCTCATCATTCCACAGTATTTCCCTGCC...TATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTAGGCCTCCACTTGGGTaGTGGAAATCAGAACAGAAG +
Preference number: 2 (lower is better)
Translates to: STVCYFSENYIFHYLADIRPPLG*WKSEQK
Trigger: CTTCTGTTCTGATTTCCACCACCCAAGTGGAGGCCT...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR GCA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGTTGCTTCAGAGGGAGTaGCGAGATATCCACTTTACA +
Preference number: 2 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRLLQRE*RDIHFT
Trigger: TGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAA...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGATAATCTCTACGACCTaGCCTGTTAAACATGTATTT +
Preference number: 2 (lower is better)
Translates to: RHLILLTTSAFLQYALPLIISTT*PVKHVF
Trigger: AAATACATGTTTAACAGGCCAGGTCGTAGAGATTAT...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp ACAGAAGCAGAACCACATAACATTCAGAAATCAGATTCACCAATGATCATGACTTCCTTCCAAGATTCTTaGGCTCTCAGTGGTAGACTT +
Preference number: 2 (lower is better)
Translates to: TEAEPHNIQKSDSPMIMTSFQDS*ALSGRL
Trigger: AAGTCTACCACTGAGAGCCCAAGAATCTTGGAAGGA...AGTCATGATCATTGGTGAATCTGATTTCTGAATGTTATGTGGTTCTGCTTCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
3UTR-3UTR TCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTCAGTTTATTCAAGGTTaGTTCGGTCCTGCTCTTACG +
Preference number: 2 (lower is better)
Translates to: STVCYFSENYIFHYLADIQFIQG*FGPALT
Trigger: CGTAAGAGCAGGACCGAATCAACCTTGAATAAACTG...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTAGTCTTTCACAGTCTTaGGGTTGTTGCTTTTCGCTG +
Preference number: 2 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALSLSQS*GCCFSL
Trigger: CAGCGAAAAGCAACAACCCCAAGACTGTGAAAGACT...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTTGGTGTTCAGATCCATaGCAGCCTTGTTATCTCCTA +
Preference number: 2 (lower is better)
Translates to: STVCYFSENYIFHYLADIWCSDP*QPCYLL
Trigger: TAGGAGATAACAAGGCTGCCATGGATCTGAACACCA...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 90 bp GCAGCTAGAATATTTTTCAAACTTAAATCTGAGCATGGCATGCTGTaGCTTGAAAGTATCTGTTTAATGTCTGGCTTTACCAAGGGAATG +
Preference number: 2 (lower is better)
Translates to: AARIFFKLKSEHGML*LESICLMSGFTKGM
Trigger: CATTCCCTTGGTAAAGCCAGACATTAAACAGATACTTTCAAGCAACAGCATGCCATGCTCAGATTTAAGTTTGAAAAATATTCTAGCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTGGGAGCGGAAATAACTaGATCTTAATGAGAGTCTGT +
Preference number: 2 (lower is better)
Translates to: STVCYFSENYIFHYLADIGSGNN*ILMRVC
Trigger: ACAGACTCTCATTAAGATTCAGTTATTTCCGCTCCC...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTTTAGAAGCAAGACAATaGGGCATTGTTTACACAGAA +
Preference number: 2 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFLEARQ*GIVYTE
Trigger: TTCTGTGTAAACAATGCCTCATTGTCTTGCTTCTAA...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR TCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTGACGTTTTGAACAGTTaGAACAATATCCTGTACCAT +
Preference number: 2 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFDVLNS*NNILYH
Trigger: ATGGTACAGGATATTGTTTCAACTGTTCAAAACGTC...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTAACCAAATACTTTCATaGGACCCTCATTTTTCAAGT +
Preference number: 2 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELNQILS*DPHFSS
Trigger: ACTTGAAAAATGAGGGTCCCATGAAAGTATTTGGTT...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CAA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGACAGTCTTGGGGTTGTaGCTTTTCGCTGGGCTGACC +
Preference number: 3 (lower is better)
Translates to: PKSVCALESAALLPQGAVTVLGL*LFAGLT
Trigger: GGTCAGCCCAGCGAAAAGCAACAACCCCAAGACTGT...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 72 bp GACCTTCCTGGGCCATCCATTGCCAGCAATGGACCCTaGTGTAGGCTGGCATCCAGCACCGAGAGGTTTCCC +
Preference number: 3 (lower is better)
Translates to: DLPGPSIASNGP*CRLASSTERFP
Trigger: GGGAAACCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGAAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CAA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGTTCACAGTCTTGGGGTaGTTGCTTTTCGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: PKSVCALESAALLPQGAVFTVLG*LLFAGL
Trigger: CAGCCCAGCGAAAAGCAACAACCCCAAGACTGTGAA...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 72 bp CCCCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTaGCTTGCTTCAGAGGGAGTGCCGAGATATCCACTT +
Preference number: 3 (lower is better)
Translates to: PPDSCPVAAPGS*LASEGVPRYPL
Trigger: AAGTGGATATCTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGACAGTCTTGGGGTTGTaGCTTTTCGCTGGGCTGACC +
Preference number: 3 (lower is better)
Translates to: PSIASNGPCCRLASSTERTVLGL*LFAGLT
Trigger: GGTCAGCCCAGCGAAAAGCAACAACCCCAAGACTGT...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CAA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGATCAGAGAGCCGTAGGTaGCGTATCAAAGAGGACTTG +
Preference number: 3 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRSESRR*RIKEDL
Trigger: CAAGTCCTCTTTGATACGCAACCTACGGCTCTCTGA...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 72 bp TGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTaGCGAGATATCCACTTTACACGTGCCCAGACGTTC +
Preference number: 3 (lower is better)
Translates to: WQLQAVGLLQRE*RDIHFTRAQTF
Trigger: GAACGTCTGGGCACGTGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 72 bp AGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTaGTTCAGAGGGAGTGCCGAGATATCCACTTTACAC +
Preference number: 3 (lower is better)
Translates to: RQLSSGSSRQLA*FRGSAEISTLH
Trigger: GTGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 72 bp AGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGGCTaGTGCAGAGTTTCAATTCTGCATACTGCACCTTTT +
Preference number: 3 (lower is better)
Translates to: RERCASSAGGCG*CRVSILHTAPF
Trigger: AAAAGGTGCAGTATGCAGAATTGAAACTCTGCAGCAGCCACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 72 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTaGCATCCAGCACCGAGAGGTTTCCCAAAAATTCAC +
Preference number: 3 (lower is better)
Translates to: GHPLPAMDPAVG*HPAPRGFPKIH
Trigger: GTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR TCA 72 bp CCTAGACCTGGAGACCTAGGGACTGAGAGCCATCCTTaGCTCTACGCTCCCTCATCCCATAGTCCAGCAATT +
Preference number: 3 (lower is better)
Translates to: PRPGDLGTESHP*LYAPSSHSPAI
Trigger: AATTGCTGGACTATGGGATGAGGGAGCGTAGAGTCAAGGATGGCTCTCAGTCCCTAGGTCTCCAGGTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CAA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTTCACATAAGGATCACTaGTGCCACAGCGATCTCGGA +
Preference number: 3 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLSHKDH*CHSDLG
Trigger: TCCGAGATCGCTGTGGCACAAGTGATCCTTATGTGA...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR TCA 72 bp GTAACTGGCATCATGGCCGTGACGTCTGAGAGGTTATaGAGGCCTCCACTTGGGTGGTGGAAATCAGAACAG +
Preference number: 3 (lower is better)
Translates to: VTGIMAVTSERL*RPPLGWWKSEQ
Trigger: CTGTTCTGATTTCCACCACCCAAGTGGAGGCCTTCATAACCTCTCAGACGTCACGGCCATGATGCCAGTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CAA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTGACCAACGGTGTCTCTaGAAATCACCCTGTTTTACC +
Preference number: 3 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLDQRCL*KSPCFT
Trigger: GGTAAAACAGGGTGATTTCAAGAGACACCGTTGGTC...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTAGAAACAGCCATAACATaGGTCTACTCAACCAAACAC +
Preference number: 3 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVETAIT*VYSTKH
Trigger: GTGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTC...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTGGGAACCAGGAAAACTaGGCAAGACTTCAACATCCC +
Preference number: 3 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGGNQEN*ARLQHP
Trigger: GGGATGTTGAAGTCTTGCCAAGTTTTCCTGGTTCCC...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CAA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCATTTCAGAAGGACACCTaGGGTACCACTGAAACAGCC +
Preference number: 3 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPFQKDT*GTTETA
Trigger: GGCTGTTTCAGTGGTACCCAAGGTGTCCTTCTGAAA...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CAA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTCGTATCAAAGAGGACTaGCTGGCACTTAATCGCTTC +
Preference number: 3 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGRIKED*LALNRF
Trigger: GAAGCGATTAAGTGCCAGCAAGTCCTCTTTGATACG...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCCTCCAGGCAGTTGGCTaGCTTCAGAGGGAGTGCCGA +
Preference number: 3 (lower is better)
Translates to: LVECRRLSHLSGSSVSNILQAVG*LQRECR
Trigger: TCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAG...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 72 bp ACATTGGTCTACTCAACCAAACACAATATTGGGTGCTaGTGTCCAAAGTCGGTGTGTGCCCTAGAGAGCGCT +
Preference number: 3 (lower is better)
Translates to: TLVYSTKHNIGC*CPKSVCALESA
Trigger: AGCGCTCTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGAGTAGACCAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 72 bp AGTCACCTGAGATTCAGCGCTAAAACTGGACTCCTGTaGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCT +
Preference number: 3 (lower is better)
Translates to: SHLRFSAKTGLL*SSHSSSYSSLP
Trigger: AGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTTTTAGCGCTGAATCTCAGGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CAA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATTTCCTGGGCCATCCATaGCCAGCAATGGACCCTGCT +
Preference number: 3 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNFLGHP*PAMDPA
Trigger: AGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGAA...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CAA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCTTCCTGGGCCATCCATaGCCAGCAATGGACCCTGCT +
Preference number: 3 (lower is better)
Translates to: LVECRRLSHLSGSSVSNIFLGHP*PAMDPA
Trigger: AGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGAA...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 72 bp TTCAGGGAGTTCTGTAAGCAATATCGCTGGGTAATCTaGTTTCTTTCGCTGAGGTCTGCTAAGGGGCAGACA +
Preference number: 3 (lower is better)
Translates to: FREFCKQYRWVI*FLSLRSAKGQT
Trigger: TGTCTGCCCCTTAGCAGACCTCAGCGAAAGAAAGCAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGTATGAAGGCCTCCACTaGGGTGGTGGAAATCAGAAC +
Preference number: 3 (lower is better)
Translates to: RHLILLTTSAFLQYALPLYEGLH*GGGNQN
Trigger: GTTCTGATTTCCACCACCCAAGTGGAGGCCTTCATA...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR GCA 72 bp GTTGGTTCTTTTTCAAGGACTCAGAGAGCCGTAGGTTaGGTATCAAAGAGGACTTGCTGGCACTTAATCGCT +
Preference number: 3 (lower is better)
Translates to: VGSFSRTQRAVG*VSKRTCWHLIA
Trigger: AGCGATTAAGTGCCAGCAAGTCCTCTTTGATACGCAACCTACGGCTCTCTGAGTCCTTGAAAAAGAACCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR GCA 72 bp ATAACATTGGTCTACTCAACCAAACACAATATTGGGTaGTGCTGTCCAAAGTCGGTGTGTGCCCTAGAGAGC +
Preference number: 3 (lower is better)
Translates to: ITLVYSTKHNIG*CCPKSVCALES
Trigger: GCTCTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGAGTAGACCAATGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 72 bp AGCCATAACATTGGTCTACTCAACCAAACACAATATTaGGTGCTGCTGTCCAAAGTCGGTGTGTGCCCTAGA +
Preference number: 3 (lower is better)
Translates to: SHNIGLLNQTQY*VLLSKVGVCPR
Trigger: TCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGAGTAGACCAATGTTATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATCGTCCCAGCTGGTGTTaGGGTCCTAAACTTAACACT +
Preference number: 3 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNRPSWC*GPKLNT
Trigger: AGTGTTAAGTTTAGGACCCAAACACCAGCTGGGACG...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR TCA 72 bp AGGGCATGCATTTCAGAAGGACACCTTGGGTACCACTaGAACAGCCATAACATTGGTCTACTCAACCAAACA +
Preference number: 3 (lower is better)
Translates to: RACISEGHLGYH*NSHNIGLLNQT
Trigger: TGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTTCTGAAATGCATGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR TCA 72 bp TTGCTGACATTCCTATTTGGATGCTTTTCAGTCACCTaGGATTCAGCGCTAAAACTGGACTCCTGTGGTCCT +
Preference number: 3 (lower is better)
Translates to: LLTFLFGCFSVT*DSALKLDSCGP
Trigger: AGGACCACAGGAGTCCAGTTTTAGCGCTGAATCTCAGGTGACTGAAAAGCATCCAAATAGGAATGTCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CCA 72 bp TGTGAAAACAAGTTCAAAGTCACTCTTGAATCCAAGTaGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCA +
Preference number: 3 (lower is better)
Translates to: CENKFKVTLESK*APGCSQGRWCS
Trigger: TGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACTTGGATTCAAGAGTGACTTTGAACTTGTTTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CAA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGCAACCAAACACAATATaGGGTGCTGCTGTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: RHLILLTTSAFLQYALPLQPNTI*GAAVQS
Trigger: ACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTG...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR TCA 72 bp TTTGCAGTCGGGAGACTTGATTTCTCCTCCCATGGCTaGCATTACCAATTTGATCAAGGACAAGTCCCTTTA +
Preference number: 3 (lower is better)
Translates to: FAVGRLDFSSHG*HYQFDQGQVPL
Trigger: TAAAGGGACTTGTCCTTGATCAAATTGGTAATGTCAGCCATGGGAGGAGAAATCAAGTCTCCCGACTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
3UTR GCA 72 bp GATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATaGTTCCTCCTGAGACATTCTTCCCTTCCAACAAAG +
Preference number: 3 (lower is better)
Translates to: DLPVLTGQTSLS*FLLRHSSLPTK
Trigger: CTTTGTTGGAAGGGAAGAATGTCTCAGGAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCCAACCAAACACAATATaGGGTGCTGCTGTCCAAAGT +
Preference number: 3 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLQPNTI*GAAVQS
Trigger: ACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTG...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGTTCACAGTCTTGGGGTaGTTGCTTTTCGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRFTVLG*LLFAGL
Trigger: CAGCCCAGCGAAAAGCAACAACCCCAAGACTGTGAA...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CAA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGGAGCATGGCATGCTGTaGCTTGAAAGTATCTGTTTA +
Preference number: 3 (lower is better)
Translates to: RHLILLTTSAFLQYALPLEHGML*LESICL
Trigger: TAAACAGATACTTTCAAGCAACAGCATGCCATGCTC...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CAA 90 bp CCACACTTCAATGTCCAAAATGCCCATCCTGTCAGAGAAGTAGTGAAAGTCAAAAATCCCGTTCCAGAGTaGGTTCTTTTTCAAGGACTC +
Preference number: 3 (lower is better)
Translates to: PHFNVQNAHPVREVVKVKNPVPE*VLFQGL
Trigger: GAGTCCTTGAAAAAGAACCAACTCTGGAACGGGATT...TTTGACTTTCACTACTTCTCTGACAGGATGGGCATTTTGGACATTGAAGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTTACATAACAATTCGGTaGTCCATCTCTAATGGACAG +
Preference number: 3 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILYITIR*SISNGQ
Trigger: CTGTCCATTAGAGATGGACAACCGAATTGTTATGTA...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR TCA 72 bp CCAGGGTGCTTCCAAACTGTCAAACCATTAAGGTCATaGTTCTGTACTTATGTGATCTCAGCGGCATTTGAT +
Preference number: 3 (lower is better)
Translates to: PGCFQTVKPLRS*FCTYVISAAFD
Trigger: ATCAAATGCCGCTGAGATCACATAAGTACAGAATCATGACCTTAATGGTTTGACAGTTTGGAAGCACCCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR GCA 72 bp AAATACTGTGGAATGATGAGGTCTGCAGGAGACAGATaGTATCAAATGAGGACTCTGGGGTGGTATTTTCTA +
Preference number: 3 (lower is better)
Translates to: KYCGMMRSAGDR*YQMRTLGWYFL
Trigger: TAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCAGACCTCATCATTCCACAGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR GCA 72 bp TTTCTATATACAGTTTATTCAAGGTTGATTCGGTCCTaGTCTTACGTCCCAGCTGGTGTTTGGGTCCTAAAC +
Preference number: 3 (lower is better)
Translates to: FLYTVYSRLIRS*SYVPAGVWVLN
Trigger: GTTTAGGACCCAAACACCAGCTGGGACGTAAGAGCAGGACCGAATCAACCTTGAATAAACTGTATATAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR GCA 72 bp GTAGTGAAAGTCAAACTGTTCCTGCCACTGCGGATTTaGACTCTTACACAGTGTCTTACTTTTATACCTCTG +
Preference number: 3 (lower is better)
Translates to: VVKVKLFLPLRI*TLTQCLTFIPL
Trigger: CAGAGGTATAAAAGTAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTTCACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 72 bp AGATCCATGGCAGCCTTGTTATCTCCTATTTCAGAATaGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCT +
Preference number: 3 (lower is better)
Translates to: RSMAALLSPISE*MLVFHSLGVVA
Trigger: AGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGATAACAAGGCTGCCATGGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CAA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATAGATCCATGGCAGCCTaGTTATCTCCTATTTCAGAA +
Preference number: 3 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNRSMAA*LSPISE
Trigger: TTCTGAAATAGGAGATAACAAGGCTGCCATGGATCT...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR-3UTR CAA 90 bp AAAGTCAAACTGTTCCTGCCACTGCGGATTTGCACTCTTACACAGTGTCTTACTGATCAAGGCTTTGGATaGGCAATACAACTATCTCAT +
Preference number: 3 (lower is better)
Translates to: KVKLFLPLRICTLTQCLTDQGFG*AIQLSH
Trigger: ATGAGATAGTTGTATTGCCAATCCAAAGCCTTGATC...AGTAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 72 bp TCCAACAAAGTTATACTTATAATCCCGTTCCAGAGTTaGTTCTTTTTCAAGGACTCAGAGAGCCGTAGGTTG +
Preference number: 3 (lower is better)
Translates to: SNKVILIIPFQS*FFFKDSESRRL
Trigger: CAACCTACGGCTCTCTGAGTCCTTGAAAAAGAACCAACTCTGGAACGGGATTATAAGTATAACTTTGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTAGATCCATGGCAGCCTaGTTATCTCCTATTTCAGAA +
Preference number: 3 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELRSMAA*LSPISE
Trigger: TTCTGAAATAGGAGATAACAAGGCTGCCATGGATCT...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR-3UTR CAA 90 bp GATATACTTGATGGCATAAAAATGTTGGGAGTGACCTTGAACCCATTGGCTTCTATCTCTTGCAGCGCTTaGATTCTGCGATTTTATTAT +
Preference number: 3 (lower is better)
Translates to: DILDGIKMLGVTLNPLASISCSA*ILRFYY
Trigger: ATAATAAAATCGCAGAATCAAAGCGCTGCAAGAGAT...AGAAGCCAATGGGTTCAAGGTCACTCCCAACATTTTTATGCCATCAAGTATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557742.1
3UTR-3UTR CAA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCGCTGACATTACCAATTaGATCAAGGACAAGTCCCTT +
Preference number: 3 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFADITN*IKDKSL
Trigger: AAGGGACTTGTCCTTGATCAAATTGGTAATGTCAGC...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
3UTR TCA 72 bp CTAACAATTGTTTTCTATATACAGTTTATTCAAGGTTaGTTCGGTCCTGCTCTTACGTCCCAGCTGGTGTTT +
Preference number: 3 (lower is better)
Translates to: LTIVFYIQFIQG*FGPALTSQLVF
Trigger: AAACACCAGCTGGGACGTAAGAGCAGGACCGAATCAACCTTGAATAAACTGTATATAGAAAACAATTGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR TCA 72 bp TTTGCACTCTTACACAGTGTCTTACTTTTATACCTCTaGTCTCCCAGTTTTAACTGGACAAACATCTCTGTC +
Preference number: 3 (lower is better)
Translates to: FALLHSVLLLYL*SPSFNWTNISV
Trigger: GACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATAAAAGTAAGACACTGTGTAAGAGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR-3UTR CAA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTGAAACAGCCATAACATaGGTCTACTCAACCAAACAC +
Preference number: 3 (lower is better)
Translates to: STVCYFSENYIFHYLADIETAIT*VYSTKH
Trigger: GTGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTC...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR TCA 72 bp GTTAAATCTCGATCATATACCTTCACACGTAGCTTTTaGTCAAGGCTTTGGATTGGCAATACAACTATCTCA +
Preference number: 3 (lower is better)
Translates to: VKSRSYTFTRSF*SRLWIGNTTIS
Trigger: TGAGATAGTTGTATTGCCAATCCAAAGCCTTGATCAAAAGCTACGTGTGAAGGTATATGATCGAGATTTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CCA 72 bp AACTATATATTCCATTACCTTGCTGACATTCCTATTTaGATGCTTTTCAGTCACCTGAGATTCAGCGCTAAA +
Preference number: 3 (lower is better)
Translates to: NYIFHYLADIPI*MLFSHLRFSAK
Trigger: TTTAGCGCTGAATCTCAGGTGACTGAAAAGCATCCAAATAGGAATGTCAGCAAGGTAATGGAATATATAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CCA 72 bp GTTTTTATAGTGATCTTTGCACAGGACAGAAATGAATaGCATGATACCAAATATACAAAGATTTGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: VFIVIFAQDRNE*HDTKYTKICSR
Trigger: CCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCATTTCTGTCCTGTGCAAAGATCACTATAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557742.1
3UTR TCA 72 bp TTCTTTATCCATTCTATCAATGATGGGCATTTAGACTaGTCCAGTGTCTTTGCTATTGTAAATAGTGTTGCA +
Preference number: 3 (lower is better)
Translates to: FFIHSINDGHLD*SSVFAIVNSVA
Trigger: TGCAACACTATTTACAATAGCAAAGACACTGGATCAGTCTAAATGCCCATCATTGATAGAATGGATAAAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CCA 72 bp ACAATGAGGCATTGTTTACACAGAAGATTGAGTAACTaGTTTAACAAAAGAGGTTCTTGGGTATCTATTGTA +
Preference number: 3 (lower is better)
Translates to: TMRHCLHRRLSN*FNKRGSWVSIV
Trigger: TACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTACTCAATCTTCTGTGTAAACAATGCCTCATTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGATGCCCTAGAGAGCGCTaGGCTTCTTCCGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRCPRER*ASSAGG
Trigger: GCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCA...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CAA 72 bp GCCCCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTaGGCTTGCTTCAGAGGGAGTGCCGAGATATCCACT +
Preference number: 4 (lower is better)
Translates to: APRQLSSGSSRQ*ACFRGSAEIST
Trigger: AGTGGATATCTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGACTGAATTCTCATCCTaGACCCTCCAGCTCCCCAAC +
Preference number: 4 (lower is better)
Translates to: PKSVCALESAALLPQGAVTEFSS*TLQLPN
Trigger: GTTGGGGAGCTGGAGGGTCCAGGATGAGAATTCAGT...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGACCAGTACGCCACGCCTaGATTTCTGCCTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRPVRHA*ISASSP
Trigger: AGGACTGGAGGCAGAAATCCAGGCGTGGCGTACTGG...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGACTGAGAGCCATCCTTaGCTCTACGCTCCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PSIASNGPCCRLASSTERTESHP*LYAPSS
Trigger: GGATGAGGGAGCGTAGAGTCAAGGATGGCTCTCAGT...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTGATCAAAGATGCCGTTaGTGGACACCCGTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: PRQLSSGSSRQLACFRGSDQRCR*WTPVSA
Trigger: AGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATC...ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTACAGACAGCTGTCCAGTaGCAGCTCCAGGCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVQTAVQ*QLQAVG
Trigger: GCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTG...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGTTCCGCAGGGGGCTGTaGCTGCTGCAGAGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: PSIASNGPCCRLASSTERFRRGL*LLQSFN
Trigger: ATTGAAACTCTGCAGCAGCCACAGCCCCCTGCGGAA...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGCACCTTGGGTACCACTaGAACAGCCATAACATTGGT +
Preference number: 4 (lower is better)
Translates to: PKSVCALESAALLPQGAVHLGYH*NSHNIG
Trigger: ACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTG...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGAAGTCAAACTGTTCCTaGCACTGCGGATTTGCACTC +
Preference number: 4 (lower is better)
Translates to: PKSVCALESAALLPQGAVKSNCS*HCGFAL
Trigger: GAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTT...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTATCCAAAGTCGGTGTGTaGCCTAGAGAGCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVSKVGV*PRERCA
Trigger: AGCGCAGCGCTCTCTAGGGCACACACCGACTTTGGA...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGTTGTTGCTTTTCGCTaGGCTGACCCTCTACGCAAC +
Preference number: 4 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRVVAFR*ADPLRN
Trigger: GTTGCGTAGAGGGTCAGCCCAGCGAAAAGCAACAAC...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGACAGAGAGCCGTAGGTTaGGTATCAAAGAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRQRAVG*VSKRTC
Trigger: GCAAGTCCTCTTTGATACGCAACCTACGGCTCTCTG...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGTCTGCAGGAGACAGATaGTATCAAATGAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: PKSVCALESAALLPQGAVSAGDR*YQMRTL
Trigger: CAGAGTCCTCATTTGATAGCATCTGTCTCCTGCAGA...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTACTTCTCTGGCTCTTCTaGTGCATCCCCTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVLLWLF*CIPSKG
Trigger: TCCCTTGGAGGGGATGCACCAGAAGAGCCAGAGAAG...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CATCACTGGCTTCCCCCGGTACCTTCCCGCAACTCAGTCACTTCCTCCTCCAGAAATGCAAAGAAATTCTaGGCCAGGCTGCCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: HHWLPPVPSRNSVTSSSRNAKKF*ARLPSP
Trigger: AGGGGAGGGCAGCCTGGCCCAGAATTTCTTTGCATT...TCTGGAGGAGGAAGTGACTGAGTTGCGGGAAGGTACCGGGGGAAGCCAGTGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTCAGGCACAGAGAGGCTaGGACGGCGGTCCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGQAQRG*DGGPSD
Trigger: ATCACTTGGACCGCCGTCTCAGCCTCTCTGTGCCTG...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGCATACTGCACCTTTTaGACATCAGACGGTACCCTA +
Preference number: 4 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRAYCTF*TSDGTL
Trigger: TAGGGTACCGTCTGATGTTCAAAAGGTGCAGTATGC...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTACGTCTGAGAGGTTATaGAGGCCTCCACTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLTSERL*RPPLGW
Trigger: CCACCCAAGTGGAGGCCTTCATAACCTCTCAGACGT...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTCAAAATGATGGTGGCTaGTGCCAGAATCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: PRQLSSGSSRQLACFRGSQNDGG*CQNQTG
Trigger: GCCTGTTTGATTCTGGCAGCAGCCACCATCATTTTG...ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp CCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTCACAATATTGGGTGCTaGTGTCCAAAGTCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PRQLSSGSSRQLACFRGSHNIGC*CPKSVC
Trigger: ACACACCGACTTTGGACAGCAGCACCCAATATTGTG...ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGCTAATAGGGTTACACTaGGGTCATGACACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PSIASNGPCCRLASSTERLIGLH*GHDTSV
Trigger: AACAGAGGTGTCATGACCTCAGTGTAACCCTATTAG...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTCGTCATCTATGTCTGTaGTCTCCTGGCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLRHLCL*SPGCPG
Trigger: TCCAGGACAGCCAGGAGAGCACAGACATAGATGACG...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTAAATGATGGTGGCTGCTaGCAGAATCAAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVNDGGC*QNQTGQ
Trigger: CTGGCCTGTTTGATTCTGGCAGCAGCCACCATCATT...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTTCAAAGAGGACTTGCTaGCACTTAATCGCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: PRQLSSGSSRQLACFRGSSKRTC*HLIASD
Trigger: ATCGGAAGCGATTAAGTGCCAGCAAGTCCTCTTTGA...ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGTGTAAGCAATATCGCTaGGTAATCTGCTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: PKSVCALESAALLPQGAVCKQYR*VICFLS
Trigger: CGAAAGAAAGCAGATTACCCAGCGATATTGCTTACA...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTAGTCTTTCACAGTCTTaGGGTTGTTGCTTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: PRQLSSGSSRQLACFRGSSLSQS*GCCFSL
Trigger: CAGCGAAAAGCAACAACCCCAAGACTGTGAAAGACT...ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTAGATCCATGGCTGCATaGAGACCCAAGAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLRSMAA*RPKKPL
Trigger: AAGTGGCTTCTTGGGTCTTCATGCAGCCATGGATCT...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp CATCACTGGCTTCCCCCGGTACCTTCCCGCAACTCAGTCACTTCCTCCTCCAGACATTTTTCAAGTGAGTaGTCTCTAGGGACCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HHWLPPVPSRNSVTSSSRHFSSE*SLGTFL
Trigger: CAGGAAGGTCCCTAGAGATCACTCACTTGAAAAATG...TCTGGAGGAGGAAGTGACTGAGTTGCGGGAAGGTACCGGGGGAAGCCAGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTCAGAGAGCCGTAGGTTaGGTATCAAAGAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLQRAVG*VSKRTC
Trigger: GCAAGTCCTCTTTGATACGCAACCTACGGCTCTCTG...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTACTGCCACTGCGGATTTaGACTCTTACACAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVLPLRI*TLTQCL
Trigger: AAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAG...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTCAACTAGGACACCCATaGATGAGGGTGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLQLGHP*MRVCAH
Trigger: ATGTGCACACACCCTCATGCATGGGTGTCCTAGTTG...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCATCCTGGGCCATCCATTaGCAGCAATGGACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPSWAIH*QQWTLL
Trigger: CAGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGA...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CATCACTGGCTTCCCCCGGTACCTTCCCGCAACTCAGTCACTTCCTCCTCCAGATCCCCTACCCCCACCTaGCTTTCTGAAATTATATGT +
Preference number: 4 (lower is better)
Translates to: HHWLPPVPSRNSVTSSSRSPTPT*LSEIIC
Trigger: ACATATAATTTCAGAAAGGCAGGTGGGGGTAGGGGA...TCTGGAGGAGGAAGTGACTGAGTTGCGGGAAGGTACCGGGGGAAGCCAGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGATCTGGGGGCTTACTTaGGTTCTTTTTCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: PSIASNGPCCRLASSTERIWGLT*VLFHLL
Trigger: AAGAAGGTGAAAAAGAACCCAAGTAAGCCCCCAGAT...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTTACTCAAGCCATCACTaGCTTCCCCCGGTACAGATT +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLYSSHH*LPPVQI
Trigger: AATCTGTACCGGGGGAAGCCAGTGATGGCTTGAGTA...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGATCCCGTTCCAGAGTTaGTTCTTTTTCAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: PSIASNGPCCRLASSTERIPFQS*FFFKDS
Trigger: TGAGTCCTTGAAAAAGAACCAACTCTGGAACGGGAT...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp CTTGGGCTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGCAGACAGCTGTCCAGTaGCAGCTCCAGGCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LGLSVVDLGGFKISCSALQTAVQ*QLQAVG
Trigger: GCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTG...CAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAGCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp CCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTTTGTACTTCTTAATGTaGATTCCCACTGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRQLSSGSSRQLACFRGSLYFLM*IPTGSS
Trigger: GCTGCTTCCAGTGGGAATCCACATTAAGAAGTACAA...ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGTGGCATGCTGTTGCTTaGAAGTATCTGTTTAATGTC +
Preference number: 4 (lower is better)
Translates to: PSIASNGPCCRLASSTERWHAVA*KYLFNV
Trigger: GACATTAAACAGATACTTTCAAGCAACAGCATGCCA...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp GCCTACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACTCCAGGCAGTTGGCTTaGTTCAGAGGGAGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: AYRQHRSSTPKQWRTKINSRQLA*FRGSAE
Trigger: CTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGA...GTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTCAAAATGATGGTGGCTaGTGCCAGAATCAAACAGGC +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLQNDGG*CQNQTG
Trigger: GCCTGTTTGATTCTGGCAGCAGCCACCATCATTTTG...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTAAAACACAATATTGGGTaGTGCTGTCCAAAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVKHNIG*CCPKSV
Trigger: CACCGACTTTGGACAGCAGCACCCAATATTGTGTTT...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGCTTCTCTGGCTCTTCTaGTGCATCCCCTCCAAGGGA +
Preference number: 4 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVLLWLF*CIPSKG
Trigger: TCCCTTGGAGGGGATGCACCAGAAGAGCCAGAGAAG...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp GCCTACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACGCAGCTCCAGGCAGTTaGCTTGCTTCAGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: AYRQHRSSTPKQWRTKINAAPGS*LASEGV
Trigger: CACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGC...GTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp CCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTTTGATAAGATCTTTTTaGACAGCTTGCGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PRQLSSGSSRQLACFRGSLIRSF*TACGCL
Trigger: AAGACAGCCGCAAGCTGTCCAAAAAGATCTTATCAA...ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTCTAGGCTTTAGGGGTTaGGAGACGAGGACAACAGCA +
Preference number: 4 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGLGFRG*ETRTTA
Trigger: TGCTGTTGTCCTCGTCTCCCAACCCCTAAAGCCTAG...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGACTGCATAGTATTCCATaGTGTACCTCTACCACATTT +
Preference number: 4 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRLHSIP*CTSTTF
Trigger: AAATGTGGTAGAGGTACACCATGGAATACTATGCAG...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CGGTGTCTCTTGAAATCACCCTGTTTTACCACTAGGTTCAAATTTAACACGATCTGCCCTAGAGAGCGCTaGGCTTCTTCCGCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: RCLLKSPCFTTRFKFNTICPRER*ASSAGG
Trigger: GCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCA...GATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTGTACATACCCAGTTATaGGATTGCTGGGTCAAATGG +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLVHTQL*DCWVKW
Trigger: CCATTTGACCCAGCAATCCCATAACTGGGTATGTAC...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCCAGGCACAGAGAGGCTaGGACGGCGGTCCAAGTGAT +
Preference number: 4 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLQAQRG*DGGPSD
Trigger: ATCACTTGGACCGCCGTCTCAGCCTCTCTGTGCCTG...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTGTATGTCTGTGCACGTaGAGGAGGAGGAAGTATACA +
Preference number: 4 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGVCLCT*RRRKYT
Trigger: TGTATACTTCCTCCTCCTTCACGTGCACAGACATAC...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTAGTCTGTTGGAGGTGTaGAAACAAGTTCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLSLLEV*KQVQSH
Trigger: GTGACTTTGAACTTGTTTTCACACCTCCAACAGACT...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTGATCAAAGATGCCGTTaGTGGACACCCGTCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILDQRCR*WTPVSA
Trigger: AGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATC...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATCCAGGCAGTTGGCTTaGTTCAGAGGGAGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQSRQLA*FRGSAE
Trigger: CTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGTCCAAAGTCGGTGTGTaGCCTAGAGAGCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RHLILLTTSAFLQYALPLSKVGV*PRERCA
Trigger: AGCGCAGCGCTCTCTAGGGCACACACCGACTTTGGA...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCAATTCTGGGCCAGGCTaGCCTCCCCTAGTGCGCCTT +
Preference number: 4 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLNSGPG*PPLVRL
Trigger: AAGGCGCACTAGGGGAGGGCAGCCTGGCCCAGAATT...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAACAAAGATGCCGTTGCTaGACACCCGTCTCCGCTCAG +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQQRCRC*TPVSAQ
Trigger: CTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTG...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATGACCCTGCTGTAGGCTaGCATCCAGCACCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNDPAVG*HPAPRG
Trigger: ACCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTC...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAAACCAAATACTTTCATaGGACCCTCATTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRNQILS*DPHFSS
Trigger: ACTTGAAAAATGAGGGTCCCATGAAAGTATTTGGTT...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGCCTCCACTTGGGTGGTaGAAATCAGAACAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVPPLGW*KSEQKW
Trigger: CCACTTCTGTTCTGATTTCCACCACCCAAGTGGAGG...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTATGAAGGCCTCCACTTaGGTGGTGGAAATCAGAACA +
Preference number: 4 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGMKAST*VVEIRT
Trigger: TGTTCTGATTTCCACCACCCAAGTGGAGGCCTTCAT...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGATATCTGTTTAATGTCTaGCTTTACCAAGGGAATGTA +
Preference number: 4 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRYLFNV*LYQGNV
Trigger: TACATTCCCTTGGTAAAGCCAGACATTAAACAGATA...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp GCCTACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACTTTCATAGACAGGGGTaGTTCCTCTTTGCGGTGCGC +
Preference number: 4 (lower is better)
Translates to: AYRQHRSSTPKQWRTKINFHRQG*FLFAVR
Trigger: GCGCACCGCAAAGAGGAACCACCCCTGTCTATGAAA...GTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR TCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTTTCACACGTAGCTTTTaGTCAAGGCTTTGGATTGGC +
Preference number: 4 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGFTRSF*SRLWIG
Trigger: GCCAATCCAAAGCCTTGATCAAAAGCTACGTGTGAA...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTACCAACGGTGTCTCTTaGAATCACCCTGTTTTACCA +
Preference number: 4 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGTNGVS*NHPVLP
Trigger: TGGTAAAACAGGGTGATTTCAAGAGACACCGTTGGT...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTCAAAATTCCAGACAGTaGTCAAAAATACCGCGAATG +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLQNSRQ*SKIPRM
Trigger: CATTCGCGGTATTTTTGATCACTGTCTGGAATTTTG...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTTCCTCCAAGACGTTTTaGACAGTTGAAACAATATCC +
Preference number: 4 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLSSKTF*TVETIS
Trigger: GGATATTGTTTCAACTGTTCAAAACGTCTTGGAGGA...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCACACCTTGGGTACCACTaGAACAGCCATAACATTGGT +
Preference number: 4 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPHLGYH*NSHNIG
Trigger: ACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTG...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCACTGCCACTGCGGATTTaGACTCTTACACAGTGTCTT +
Preference number: 4 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPLPLRI*TLTQCL
Trigger: AAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAG...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGTATCCACTTTACACGTaGCCAGACGTTCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVYPLYT*PDVPHA
Trigger: AGCATGAGGAACGTCTGGGCACGTGTAAAGTGGATA...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTTTGCTTCAGAGGGAGTaGCGAGATATCCACTTTACA +
Preference number: 4 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGLLQRE*RDIHFT
Trigger: TGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAA...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCTCCAGGCAGTTGGCTTaGTTCAGAGGGAGTGCCGAG +
Preference number: 4 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLSRQLA*FRGSAE
Trigger: CTCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGA...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAAGCAGGGGGCTGTGGCTaGTGCAGAGTTTCAATTCTG +
Preference number: 4 (lower is better)
Translates to: KDTLGTTETAITLVYSTKAGGCG*CRVSIL
Trigger: CAGAATTGAAACTCTGCAGCAGCCACAGCCCCCTGC...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp CGGTGTCTCTTGAAATCACCCTGTTTTACCACTAGGTTCAAATTTAACACGATCGCCAGCAATGGACCCTaGTGTAGGCTGGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: RCLLKSPCFTTRFKFNTIASNGP*CRLASS
Trigger: GCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGC...GATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCTCCTGGGCCATCCATTaGCAGCAATGGACCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LVECRRLSHLSGSSVSNISWAIH*QQWTLL
Trigger: CAGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGA...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCGCAGCTCCAGGCAGTTaGCTTGCTTCAGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LVECRRLSHLSGSSVSNIAAPGS*LASEGV
Trigger: CACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGC...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATCTCTCCTGGCTGTCCTaGATGCTGCTGACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNLSWLS*MLLTLP
Trigger: AGGCAAGGTCAGCAGCATCCAGGACAGCCAGGAGAG...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp TCTTTCAGGGAGTTCTGTAAGCAATATCGCTGGGTAATCTGCTTTCTTTCGCTGATGTCTGTGCTCTCCTaGCTGTCCTGGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SFREFCKQYRWVICFLSLMSVLS*LSWMLL
Trigger: CAGCAGCATCCAGGACAGCCAGGAGAGCACAGACAT...CAGCGAAAGAAAGCAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTAGATCCATGGCTGCATaGAGACCCAAGAAGCCACTT +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILRSMAA*RPKKPL
Trigger: AAGTGGCTTCTTGGGTCTTCATGCAGCCATGGATCT...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCCCTTCAGGTGTATGGTaGGGAGGTACGCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLPSGVW*GGTQKG
Trigger: GCCCTTTTGCGTACCTCCTCACCATACACCTGAAGG...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCTGTCCTGGATGCTGCTaGCCTTGCCTTTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: LVECRRLSHLSGSSVSNICPGCC*PCLSQV
Trigger: GACCTGTGAAAGGCAAGGTCAGCAGCATCCAGGACA...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCAACAGATGCTATCAAATaGGGACTCTGGGGTGGTATT +
Preference number: 4 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPTDAIK*GLWGGI
Trigger: AATACCACCCCAGAGTCCTCATTTGATAGCATCTGT...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGCAGTTTATTCAAGGTTaGTTCGGTCCTGCTCTTACG +
Preference number: 4 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVQFIQG*FGPALT
Trigger: CGTAAGAGCAGGACCGAATCAACCTTGAATAAACTG...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGACTCCCAGCTTCGGTTaGGAGAAGACGCCCACCCCC +
Preference number: 4 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRTPSFG*EKTPTP
Trigger: GGGGGTGGGCGTCTTCTCTCAACCGAAGCTGGGAGT...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCCACCTTTCTGATCTCTaGACCACAAGCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLHLSDL*TTSSSG
Trigger: CCCGGAGCTGCTTGTGGTTCAGAGATCAGAAAGGTG...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTCTCAGGACACCTTTCTaGTCTCTGAACCACAAGCAG +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILLRTPF*SLNHKQ
Trigger: CTGCTTGTGGTTCAGAGATCAGAAAGGTGTCCTGAG...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGTATCGCTGGGTAATCTaGTTTCTTTCGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVYRWVI*FLSLRS
Trigger: AGACCTCAGCGAAAGAAAGCAGATTACCCAGCGATA...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAACGTCATCTATGTCTGTaGTCTCCTGGCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQRHLCL*SPGCPG
Trigger: TCCAGGACAGCCAGGAGAGCACAGACATAGATGACG...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTCAGACAGCTGTCCAGTaGCAGCTCCAGGCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIQTAVQ*QLQAVG
Trigger: GCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTG...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp CGGTGTCTCTTGAAATCACCCTGTTTTACCACTAGGTTCAAATTTAACACGATCCTCTCCTGGCTGTCCTaGATGCTGCTGACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RCLLKSPCFTTRFKFNTILSWLS*MLLTLP
Trigger: AGGCAAGGTCAGCAGCATCCAGGACAGCCAGGAGAG...GATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATTTCCGCAGGGGGCTGTaGCTGCTGCAGAGTTTCAAT +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNFRRGL*LLQSFN
Trigger: ATTGAAACTCTGCAGCAGCCACAGCCCCCTGCGGAA...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp TCTTTCAGGGAGTTCTGTAAGCAATATCGCTGGGTAATCTGCTTTCTTTCGCTGGTTGTTGCTTTTCGCTaGGCTGACCCTCTACGCAAC +
Preference number: 4 (lower is better)
Translates to: SFREFCKQYRWVICFLSLVVAFR*ADPLRN
Trigger: GTTGCGTAGAGGGTCAGCCCAGCGAAAAGCAACAAC...CAGCGAAAGAAAGCAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTTGTCATGCTTCCTCCTaGGACATTCTTCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILCHASS*DILPFQ
Trigger: TTGGAAGGGAAGAATGTCTCAGGAGGAAGCATGACA...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCTCTGCTTTCTTTCGCTaGGGTCTGCTAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRSAFFR*GLLRGR
Trigger: TCTGCCCCTTAGCAGACCTCAGCGAAAGAAAGCAGA...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TCAACCAAACACAATATTGGGTGCTGCTGTCCAAAGTCGGTGTGTGCCCTAGAGAGTCTGTTGGAGGTGTaGAAACAAGTTCAAAGTCAC +
Preference number: 4 (lower is better)
Translates to: STKHNIGCCCPKSVCALESLLEV*KQVQSH
Trigger: GTGACTTTGAACTTGTTTTCACACCTCCAACAGACT...CTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp AAAGTCAAACTGTTCCTGCCACTGCGGATTTGCACTCTTACACAGTGTCTTACTTCTGAAGATCAAAGATaGCGTTGCTGGACACCCGTC +
Preference number: 4 (lower is better)
Translates to: KVKLFLPLRICTLTQCLTSEDQR*RCWTPV
Trigger: GACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGA...AGTAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp TACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACGACTATCCACTTTACACGTaGCCAGACGTTCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: YRQHRSSTPKQWRTKINDYPLYT*PDVPHA
Trigger: AGCATGAGGAACGTCTGGGCACGTGTAAAGTGGATA...GTCGTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp CTTGGGCTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGTTGCTTCAGAGGGAGTaGCGAGATATCCACTTTACA +
Preference number: 4 (lower is better)
Translates to: LGLSVVDLGGFKISCSALLLQRE*RDIHFT
Trigger: TGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAA...CAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAGCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp GCCTACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACTCTTTTTGGACAGCTTaGGGCTGTCTTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: AYRQHRSSTPKQWRTKINSFWTA*GCLQQS
Trigger: GCTTTGTTGAAGACAGCCGCAAGCTGTCCAAAAAGA...GTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCGGGGGCTGTGGCTGCTaGAGAGTTTCAATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRGGCGC*RVSILH
Trigger: ATGCAGAATTGAAACTCTGCAGCAGCCACAGCCCCC...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCGGGTGCCACAGGGCATaGATTTCAGAAGGACACCTT +
Preference number: 4 (lower is better)
Translates to: LVECRRLSHLSGSSVSNIGCHRA*ISEGHL
Trigger: AAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCC...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp TCTTTCAGGGAGTTCTGTAAGCAATATCGCTGGGTAATCTGCTTTCTTTCGCTGCAACTAGGACACCCATaGATGAGGGTGTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: SFREFCKQYRWVICFLSLQLGHP*MRVCAH
Trigger: ATGTGCACACACCCTCATGCATGGGTGTCCTAGTTG...CAGCGAAAGAAAGCAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp CTTGGGCTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGCAGAGAGCCGTAGGTTaGGTATCAAAGAGGACTAAA +
Preference number: 4 (lower is better)
Translates to: LGLSVVDLGGFKISCSALQRAVG*VSKRTK
Trigger: TTTAGTCCTCTTTGATACGCAACCTACGGCTCTCTG...CAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAGCCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCGGTACGCAAAAGGGCTaGGGAGGTTACTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRGTQKG*GGYSSH
Trigger: ATGGCTTGAGTAACCTCCCCAGCCCTTTTGCGTACC...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTGCAGCTCCAGGCAGTTaGCTTGCTTCAGAGGGAGTG +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIAAPGS*LASEGV
Trigger: CACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGC...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AGACGGTATGCGTCTGAAGTCGGTCATTGCCTAACTCCAACAAGCAAAATGGGTATGAGGACTCTGGGGTaGTATTTTCTAGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: RRYASEVGHCLTPTSKMGMRTLG*YFLEMG
Trigger: CCCCATTTCTAGAAAATACCACCCCAGAGTCCTCAT...ACCCATTTTGCTTGTTGGAGTTAGGCAATGACCGACTTCAGACGCATACCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGGGCAGGGAAATACTGTaGAATGATGAGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RHLILLTTSAFLQYALPLGREIL*NDEVCR
Trigger: CCTGCAGACCTCATCATTCCACAGTATTTCCCTGCC...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAAAGGCCTCCACTTGGGTaGTGGAAATCAGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQRPPLG*WKSEQK
Trigger: CTTCTGTTCTGATTTCCACCACCCAAGTGGAGGCCT...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTGCCTCTTATGATGTATaGCAGATGCCAGAAAGATAT +
Preference number: 4 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGASYDV*QMPERY
Trigger: ATATCTTTCTGGCATCTGCCATACATCATAAGAGGC...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp CCACACTTCAATGTCCAAAATGCCCATCCTGTCAGAGAAGTAGTGAAAGTCAAAGCAATGACTCCTCTGTaGAAGGAGTCCTGGATGTGG +
Preference number: 4 (lower is better)
Translates to: PHFNVQNAHPVREVVKVKAMTPL*KESWMW
Trigger: CCACATCCAGGACTCCTTCCACAGAGGAGTCATTGC...TTTGACTTTCACTACTTCTCTGACAGGATGGGCATTTTGGACATTGAAGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CGGTGTCTCTTGAAATCACCCTGTTTTACCACTAGGTTCAAATTTAACACGATCTACTCAAGCCATCACTaGCTTCCCCCGGTACCTTCC +
Preference number: 4 (lower is better)
Translates to: RCLLKSPCFTTRFKFNTIYSSHH*LPPVPS
Trigger: GGAAGGTACCGGGGGAAGCCAGTGATGGCTTGAGTA...GATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CAA 72 bp GTTGATTCGGTCCTGCTCTTACGTCCCAGCTGGTGTTaGGGTCCTAAACTTAACACTGAGAATTTCAATCGG +
Preference number: 4 (lower is better)
Translates to: VDSVLLLRPSWC*GPKLNTENFNR
Trigger: CCGATTGAAATTCTCAGTGTTAAGTTTAGGACCCAAACACCAGCTGGGACGTAAGAGCAGGACCGAATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 72 bp AGTTGGTTCTTTTTCAAGGACTCAGAGAGCCGTAGGTaGCGTATCAAAGAGGACTTGCTGGCACTTAATCGC +
Preference number: 4 (lower is better)
Translates to: SWFFFKDSESRR*RIKEDLLALNR
Trigger: GCGATTAAGTGCCAGCAAGTCCTCTTTGATACGCAACCTACGGCTCTCTGAGTCCTTGAAAAAGAACCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATCTTCTTGCTCAAGTTaGTCAACAATGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQSSCSS*STMAWS
Trigger: GGACCAGGCCATTGTTGATCAACTTGAGCAAGAAGA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTCCAAGGGAAGTTTTCTaGAGATCAAAGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILPREVF*RSKMPL
Trigger: CAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGG...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp CTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGATTCTGTGTCATGCTTCCTCCTaGGACATTCTTCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LSVVDLGGFKISCSALILCHASS*DILPFQ
Trigger: TTGGAAGGGAAGAATGTCTCAGGAGGAAGCATGACA...CAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR TCA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTTGTCCTGGATGCTGCTaGCCTTGCCTTTCACAGGTC +
Preference number: 4 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGCPGCC*PCLSQV
Trigger: GACCTGTGAAAGGCAAGGTCAGCAGCATCCAGGACA...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCGTTCAAAGTCACTCTTaGATCCAAGTGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLVQSHS*IQVGSW
Trigger: CCAGGAGCCCACTTGGATTCAAGAGTGACTTTGAAC...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTACAGATGCTATCAAATaGGGACTCTGGGGTGGTATT +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILTDAIK*GLWGGI
Trigger: AATACCACCCCAGAGTCCTCATTTGATAGCATCTGT...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATTTCTACCATTCCACTaGAATGGCTTGTTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQFLPFH*NGLLPG
Trigger: CCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAACTGTCTTTAGGTTTTTaGGGAAACACCCACCCTGTC +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQLSLGF*GNTHPV
Trigger: GACAGGGTGGGTGTTTCCTCAAAAACCTAAAGACAG...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATTCTGAAGATCAAAGATaGCGTTGCTGGACACCCGTC +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNSEDQR*RCWTPV
Trigger: GACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGA...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp AAAGTCAAACTGTTCCTGCCACTGCGGATTTGCACTCTTACACAGTGTCTTACTTATCCACTTTACACGTaGCCAGACGTTCCTCATGCT +
Preference number: 4 (lower is better)
Translates to: KVKLFLPLRICTLTQCLTYPLYT*PDVPHA
Trigger: AGCATGAGGAACGTCTGGGCACGTGTAAAGTGGATA...AGTAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp TACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACGACTATCGCTGGGTAATCTaGTTTCTTTCGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: YRQHRSSTPKQWRTKINDYRWVI*FLSLRS
Trigger: AGACCTCAGCGAAAGAAAGCAGATTACCCAGCGATA...GTCGTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp AGACGGTATGCGTCTGAAGTCGGTCATTGCCTAACTCCAACAAGCAAAATGGGTTCTGAAGTCGGTCATTaGCTAACTCCAACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: RRYASEVGHCLTPTSKMGSEVGH*LTPTSK
Trigger: TTTGCTTGTTGGAGTTAGGCAATGACCGACTTCAGA...ACCCATTTTGCTTGTTGGAGTTAGGCAATGACCGACTTCAGACGCATACCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTTCTTTTTGGACAGCTTaGGGCTGTCTTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILSFWTA*GCLQQS
Trigger: GCTTTGTTGAAGACAGCCGCAAGCTGTCCAAAAAGA...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTGTTTATCCAGATCCATaGCTGCATGAAGACCCAAGA +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILVYPDP*LHEDPR
Trigger: TCTTGGGTCTTCATGCAGCCATGGATCTGGATAAAC...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp GCCTACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACATCCCGTTCCAGAGTTaGTTCTTTTTCAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: AYRQHRSSTPKQWRTKINIPFQS*FFFKDS
Trigger: TGAGTCCTTGAAAAAGAACCAACTCTGGAACGGGAT...GTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp CTTGGGCTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGTTGTACTTCTTAATGTaGATTCCCACTGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LGLSVVDLGGFKISCSALLYFLM*IPTGSS
Trigger: GCTGCTTCCAGTGGGAATCCACATTAAGAAGTACAA...CAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAGCCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATAATCTGAAAGGAGTGTaGGGCTGGGGAGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNNLKGV*GWGAEI
Trigger: TATTTCCGCTCCCCAGCCCCACACTCCTTTCAGATT...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTGACCCTGCTGTAGGCTaGCATCCAGCACCGAGAGGT +
Preference number: 4 (lower is better)
Translates to: STVCYFSENYIFHYLADIDPAVG*HPAPRG
Trigger: ACCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTC...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTATGAGGACTCTGGGGTaGTATTTTCTAGAAATGGGG +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILMRTLG*YFLEMG
Trigger: CCCCATTTCTAGAAAATACCACCCCAGAGTCCTCAT...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CAA 72 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATaGGTCTACTCAACCAAACACAATATTGGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KDTLGTTETAIT*VYSTKHNIGCC
Trigger: GCAGCACCCAATATTGTGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CAA 72 bp CTTGACTCTACGCTCCCTCATCCCATAGTCCAGCAATaGTTAAGTCCTGCTCACTTTATCTCTTCACCATCT +
Preference number: 4 (lower is better)
Translates to: LDSTLPHPIVQQ*LSPAHFISSPS
Trigger: AGATGGTGAAGAGATAAAGTGAGCAGGACTTAACAATTGCTGGACTATGGGATGAGGGAGCGTAGAGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATTCTTCTTGCTCAAGTTaGTCAACAATGGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNSSCSS*STMAWS
Trigger: GGACCAGGCCATTGTTGATCAACTTGAGCAAGAAGA...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp GGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTTTATAAGACGGCGGTCCAAGTaGTGCCTTGCCCGTAGATCT +
Preference number: 4 (lower is better)
Translates to: GSWVSIVCTTTRFTGAFIRRRSK*CLARRS
Trigger: AGATCTACGGGCAAGGCATCACTTGGACCGCCGTCT...TATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGCCTTCAGGTGTATGGTaGGGAGGTACGCAAAAGGGC +
Preference number: 4 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRPSGVW*GGTQKG
Trigger: GCCCTTTTGCGTACCTCCTCACCATACACCTGAAGG...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCGTATGTCTGTGCACGTaGAGGAGGAGGAAGTATACA +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRVCLCT*RRRKYT
Trigger: TGTATACTTCCTCCTCCTTCACGTGCACAGACATAC...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTGGGAGCGGAAATAACTaGATCTTAATGAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILGSGNN*ILMRVC
Trigger: ACAGACTCTCATTAAGATTCAGTTATTTCCGCTCCC...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTCATGGCCGTGACGTCTaGGAGGTTATGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALHGRDV*EVMKAS
Trigger: GGAGGCCTTCATAACCTCTCAGACGTCACGGCCATG...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGTATCCATTCTATCAATaGTGGGCATTTAGACTGATC +
Preference number: 4 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVYPFYQ*WAFRLI
Trigger: GATCAGTCTAAATGCCCATCATTGATAGAATGGATA...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCTGCAGTCGGGAGACTTaGTTTCTCCTCCCATGGCTG +
Preference number: 4 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFCSRET*FLLPWL
Trigger: CAGCCATGGGAGGAGAAATCAAGTCTCCCGACTGCA...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp CCACACTTCAATGTCCAAAATGCCCATCCTGTCAGAGAAGTAGTGAAAGTCAAAAACTGTTCCTGCCACTaGGGATTTGCACTCTTACAC +
Preference number: 4 (lower is better)
Translates to: PHFNVQNAHPVREVVKVKNCSCH*GFALLH
Trigger: GTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTT...TTTGACTTTCACTACTTCTCTGACAGGATGGGCATTTTGGACATTGAAGTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTCTTCAATGTCCAAAATaGCCATCCTGTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILLQCPK*PSCQRS
Trigger: ACTTCTCTGACAGGATGGGCATTTTGGACATTGAAG...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAATTGCTTCAGAGGGAGTaGCGAGATATCCACTTTACA +
Preference number: 4 (lower is better)
Translates to: KDTLGTTETAITLVYSTKLLQRE*RDIHFT
Trigger: TGTAAAGTGGATATCTCGGCACTCCCTCTGAAGCAA...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATCTTTTTGGACAGCTTaGGGCTGTCTTCAACAAAGC +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQSFWTA*GCLQQS
Trigger: GCTTTGTTGAAGACAGCCGCAAGCTGTCCAAAAAGA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATCACAATATTGGGTGCTaGTGTCCAAAGTCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNHNIGC*CPKSVC
Trigger: ACACACCGACTTTGGACAGCAGCACCCAATATTGTG...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTGGGTGCCACAGGGCATaGATTTCAGAAGGACACCTT +
Preference number: 4 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGGCHRA*ISEGHL
Trigger: AAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCC...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATCCCCTACCCCCACCTaGCTTTCTGAAATTATATGT +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQSPTPT*LSEIIC
Trigger: ACATATAATTTCAGAAAGGCAGGTGGGGGTAGGGGA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGTCTGCAGGAGACAGATaGTATCAAATGAGGACTCTG +
Preference number: 4 (lower is better)
Translates to: RHLILLTTSAFLQYALPLSAGDR*YQMRTL
Trigger: CAGAGTCCTCATTTGATAGCATCTGTCTCCTGCAGA...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTAGGTTGATTCGGTCCTaGTCTTACGTCCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIRLIRS*SYVPAG
Trigger: ACCAGCTGGGACGTAAGAGCAGGACCGAATCAACCT...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCGGGGTGGTTCCTCTTTaGGGTGCGCGAATGCTATTG +
Preference number: 4 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFGVVPL*GARMLL
Trigger: CAATAGCATTCGCGCACCGCAAAGAGGAACCACCCC...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTGGTACGCAAAAGGGCTaGGGAGGTTACTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFGTQKG*GGYSSH
Trigger: ATGGCTTGAGTAACCTCCCCAGCCCTTTTGCGTACC...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp TCAGAGGCCCCATATTTTCACATCCACTCACTTCTCAACCCAGCGTGGTTTCCAATCAAGGCTTTGGATTaGCAATACAACTATCTCATC +
Preference number: 4 (lower is better)
Translates to: SEAPYFHIHSLLNPAWFPIKALD*QYNYLI
Trigger: GATGAGATAGTTGTATTGCCAATCCAAAGCCTTGAT...TGGAAACCACGCTGGGTTGAGAAGTGAGTGGATGTGAAAATATGGGGCCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTATCCAAGTGGGCTCCTaGCTGTTCTCAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIIQVGS*LFSRKV
Trigger: CACCTTCCTTGAGAACAGCCAGGAGCCCACTTGGAT...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTATCCAAGTGGGCTCCTaGCTGTTCTCAAGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFIQVGS*LFSRKV
Trigger: CACCTTCCTTGAGAACAGCCAGGAGCCCACTTGGAT...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp CGGTGTCTCTTGAAATCACCCTGTTTTACCACTAGGTTCAAATTTAACACGATCGGCAGGGAAATACTGTaGAATGATGAGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: RCLLKSPCFTTRFKFNTIGREIL*NDEVCR
Trigger: CCTGCAGACCTCATCATTCCACAGTATTTCCCTGCC...GATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATGTCCCAGCTGGTGTTTaGGTCCTAAACTTAACACTG +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNVPAGV*VLNLTL
Trigger: CAGTGTTAAGTTTAGGACCCAAACACCAGCTGGGAC...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATCTCTTACGTCCCAGCTaGTGTTTGGGTCCTAAACTT +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNLLRPS*CLGPKL
Trigger: AAGTTTAGGACCCAAACACCAGCTGGGACGTAAGAG...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 72 bp CAGCGGCATTTGATATTATTGACCACATCAGCTTTCTaGCAGTATGCTCTGCCACTGAATTCTAGGACAGTC +
Preference number: 4 (lower is better)
Translates to: QRHLILLTTSAF*QYALPLNSRTV
Trigger: GACTGTCCTAGAATTCAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCTTCACACGTAGCTTTTaGTCAAGGCTTTGGATTGGC +
Preference number: 4 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLFTRSF*SRLWIG
Trigger: GCCAATCCAAAGCCTTGATCAAAAGCTACGTGTGAA...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp GCCTACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACTTACTTTTATACCTCTaGTCTCCCAGTTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: AYRQHRSSTPKQWRTKINLLLYL*SPSFNW
Trigger: CCAGTTAAAACTGGGAGATCAGAGGTATAAAAGTAA...GTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR TCA 90 bp ACAGAAGCAGAACCACATAACATTCAGAAATCAGATTCACCAATGATCATGACTTCTGCTTTCTTTCGCTaGGGTCTGCTAAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: TEAEPHNIQKSDSPMIMTSAFFR*GLLRGR
Trigger: TCTGCCCCTTAGCAGACCTCAGCGAAAGAAAGCAGA...AGTCATGATCATTGGTGAATCTGATTTCTGAATGTTATGTGGTTCTGCTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR TCA 90 bp TCAAAAATACCGCGAATGCTATTGTACTTCTTAATGTGGATTCCCACTGGAAGCGCATACTGCACCTTTTaGACATCAGACGGTACCCTA +
Preference number: 4 (lower is better)
Translates to: SKIPRMLLYFLMWIPTGSAYCTF*TSDGTL
Trigger: TAGGGTACCGTCTGATGTTCAAAAGGTGCAGTATGC...GCTTCCAGTGGGAATCCACATTAAGAAGTACAATAGCATTCGCGGTATTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp CACAGAAGATTGAGTAACTGGTTTAACAAAAGAGGTTCTTGGGTATCTATTGTATGCTTTTCGCTGGGCTaGCCCTCTACGCAACTAGGA +
Preference number: 4 (lower is better)
Translates to: HRRLSNWFNKRGSWVSIVCFSLG*PSTQLG
Trigger: TCCTAGTTGCGTAGAGGGTCAGCCCAGCGAAAAGCA...TACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTACTCAATCTTCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTCTGGCATCATGGCCGTaGCGTCTGAGAGGTTATGAA +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELLASWP*RLRGYE
Trigger: TTCATAACCTCTCAGACGTCACGGCCATGATGCCAG...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGCAAACATCTCTGTCATaGTTCCTCCTGAGACATTCT +
Preference number: 4 (lower is better)
Translates to: RHLILLTTSAFLQYALPLQTSLS*FLLRHS
Trigger: AGAATGTCTCAGGAGGAAGCATGACAGAGATGTTTG...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AAAGTCAAACTGTTCCTGCCACTGCGGATTTGCACTCTTACACAGTGTCTTACTCAAACATCTCTGTCATaGTTCCTCCTGAGACATTCT +
Preference number: 4 (lower is better)
Translates to: KVKLFLPLRICTLTQCLTQTSLS*FLLRHS
Trigger: AGAATGTCTCAGGAGGAAGCATGACAGAGATGTTTG...AGTAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCTATCGCTGGGTAATCTaGTTTCTTTCGCTGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LVECRRLSHLSGSSVSNIYRWVI*FLSLRS
Trigger: AGACCTCAGCGAAAGAAAGCAGATTACCCAGCGATA...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp AAAGTCAAACTGTTCCTGCCACTGCGGATTTGCACTCTTACACAGTGTCTTACTCCTTCACTTGTAGAATaGCGACGTCTTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: KVKLFLPLRICTLTQCLTPSLVE*RRLSHL
Trigger: AAGATGTGAAAGACGTCGGCATTCTACAAGTGAAGG...AGTAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp CTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGATTCTGCCTTCACTTGTAGAATaGCGACGTCTTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: LSVVDLGGFKISCSALILPSLVE*RRLSHL
Trigger: AAGATGTGAAAGACGTCGGCATTCTACAAGTGAAGG...CAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATCTGAAGTCGGTCATTaGCTAACTCCAACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQSEVGH*LTPTSK
Trigger: TTTGCTTGTTGGAGTTAGGCAATGACCGACTTCAGA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGATTCTGTCTGAAGTCGGTCATTaGCTAACTCCAACAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LSVVDLGGFKISCSALILSEVGH*LTPTSK
Trigger: TTTGCTTGTTGGAGTTAGGCAATGACCGACTTCAGA...CAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTTTCCTCCTCCAGAAATaGATCAACTCCTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFFLLQK*INSCWP
Trigger: TGGCCAGCAGGAGTTGATGCATTTCTGGAGGAGGAA...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp CTTGGGCTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGTTTTATATGAGGCTATaGCTGTTGGCTAAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LGLSVVDLGGFKISCSALFYMRL*LLAKRE
Trigger: TTCTCTCTTAGCCAACAGGCATAGCCTCATATAAAA...CAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAGCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGAATGTGGATTCCCACTaGAAGCAGCTTTTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: RHLILLTTSAFLQYALPLNVDSH*KQLLRN
Trigger: GTTCCTTAAAAGCTGCTTCCAGTGGGAATCCACATT...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTATGTCTGTGCTCTCCTaGCTGTCCTGGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALMSVLS*LSWMLL
Trigger: CAGCAGCATCCAGGACAGCCAGGAGAGCACAGACAT...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAAAACCAAACACAATATTaGGTGCTGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: KDTLGTTETAITLVYSTKNQTQY*VLLSKV
Trigger: GACTTTGGACAGCAGCACCCAATATTGTGTTTGGTT...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTCAGTTATGGGATTGCTaGGTCAAATGGTATTTCTGT +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILQLWDC*VKWYFC
Trigger: ACAGAAATACCATTTGACCCAGCAATCCCATAACTG...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTTGTCATGCTTCCTCCTaGGACATTCTTCCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGCHASS*DILPFQ
Trigger: TTGGAAGGGAAGAATGTCTCAGGAGGAAGCATGACA...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTTTACTTTTATACCTCTaGTCTCCCAGTTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILLLLYL*SPSFNW
Trigger: CCAGTTAAAACTGGGAGATCAGAGGTATAAAAGTAA...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGTCCTCCAAGACGTTTTaGACAGTTGAAACAATATCC +
Preference number: 4 (lower is better)
Translates to: RHLILLTTSAFLQYALPLSSKTF*TVETIS
Trigger: GGATATTGTTTCAACTGTTCAAAACGTCTTGGAGGA...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATGTTACACTGAGGTCATaGCACCTCTGTTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNVTLRS*HLCFLT
Trigger: AGTAAGAAAACAGAGGTGTCATGACCTCAGTGTAAC...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTAAGTCAAACTGTTCCTaGCACTGCGGATTTGCACTC +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIKSNCS*HCGFAL
Trigger: GAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTT...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTAATGATGGTGGCTGCTaGCAGAATCAAACAGGCCAG +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELNDGGC*QNQTGQ
Trigger: CTGGCCTGTTTGATTCTGGCAGCAGCCACCATCATT...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATACCTCTACTGAAAACTaGAATGACTCCTCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNTSTEN*NDSSVE
Trigger: TTCCACAGAGGAGTCATTGCAGTTTTCAGTAGAGGT...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCAATGTGGATTCCCACTaGAAGCAGCTTTTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRNVDSH*KQLLRN
Trigger: GTTCCTTAAAAGCTGCTTCCAGTGGGAATCCACATT...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp CGGTGTCTCTTGAAATCACCCTGTTTTACCACTAGGTTCAAATTTAACACGATCTGGTGTTCAGATCCATaGCAGCCTTGTTATCTCCTA +
Preference number: 4 (lower is better)
Translates to: RCLLKSPCFTTRFKFNTIWCSDP*QPCYLL
Trigger: TAGGAGATAACAAGGCTGCCATGGATCTGAACACCA...GATCGTGTTAAATTTGAACCTAGTGGTAAAACAGGGTGATTTCAAGAGACACCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp CTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGATTCTGTCTACACCGAAGCAGTaGAGAACTAAAATAAACGAC +
Preference number: 4 (lower is better)
Translates to: LSVVDLGGFKISCSALILSTPKQ*RTKIND
Trigger: GTCGTTTATTTTAGTTCTCCACTGCTTCGGTGTAGA...CAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
3UTR CAA 72 bp TTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTaGTTATCTCCTATTTCAGAATGGATGTTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FSRKVVFRSMAA*LSPISEWMLVF
Trigger: AAAGACTAACATCCATTCTGAAATAGGAGATAACAAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
3UTR CAA 72 bp AGTAGTGAAAGTCAAACTGTTCCTGCCACTGCGGATTaGCACTCTTACACAGTGTCTTACTTTTATACCTCT +
Preference number: 4 (lower is better)
Translates to: SSESQTVPATAD*HSYTVSYFYTS
Trigger: AGAGGTATAAAAGTAAGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTTTGACTTTCACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR TCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATCCCCACCTGCCTTTCTaGAATTATATGTTGACATTT +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNPHLPF*NYMLTF
Trigger: AAATGTCAACATATAATTTCAGAAAGGCAGGTGGGG...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTTCCAGCCCTCTGTTCTaGAAGCAGCACATGAAAAGG +
Preference number: 4 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALSSPLF*KQHMKR
Trigger: CCTTTTCATGTGCTGCTTTCAGAACAGAGGGCTGGA...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTAAGCATTCAGGTCACTaGTTCCACATAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIKHSGH*FHIASL
Trigger: CAGAGAAGCTATGTGGAAGCAGTGACCTGAATGCTT...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGACTGAGAATGACAAATaGAGAACCCATGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: RHLILLTTSAFLQYALPLTENDK*RTHEIR
Trigger: TCTGATTTCATGGGTTCTGCATTTGTCATTCTCAGT...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp TCTTTCAGGGAGTTCTGTAAGCAATATCGCTGGGTAATCTGCTTTCTTTCGCTGCAGCTTTTAAGGAACTaGATTGTATTCCATATTGCC +
Preference number: 4 (lower is better)
Translates to: SFREFCKQYRWVICFLSLQLLRN*IVFHIA
Trigger: GGCAATATGGAATACAATGCAGTTCCTTAAAAGCTG...CAGCGAAAGAAAGCAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp TACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACGACCTTCAATGTCCAAAATaGCCATCCTTACTTTTATAC +
Preference number: 4 (lower is better)
Translates to: YRQHRSSTPKQWRTKINDLQCPK*PSLLLY
Trigger: GTATAAAAGTAAGGATGGGCATTTTGGACATTGAAG...GTCGTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTTCAAAGAGGACTTGCTaGCACTTAATCGCTTCCGAT +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKISKRTC*HLIASD
Trigger: ATCGGAAGCGATTAAGTGCCAGCAAGTCCTCTTTGA...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCTGTAAGCAATATCGCTaGGTAATCTGCTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRCKQYR*VICFLS
Trigger: CGAAAGAAAGCAGATTACCCAGCGATATTGCTTACA...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp GATATACTTGATGGCATAAAAATGTTGGGAGTGACCTTGAACCCATTGGCTTCTAATGTGGATTCCCACTaGAAGCAGCTTTTAAGGAAC +
Preference number: 4 (lower is better)
Translates to: DILDGIKMLGVTLNPLASNVDSH*KQLLRN
Trigger: GTTCCTTAAAAGCTGCTTCCAGTGGGAATCCACATT...AGAAGCCAATGGGTTCAAGGTCACTCCCAACATTTTTATGCCATCAAGTATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTTGGTGTTCAGATCCATaGCAGCCTTGTTATCTCCTA +
Preference number: 4 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGWCSDP*QPCYLL
Trigger: TAGGAGATAACAAGGCTGCCATGGATCTGAACACCA...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTTGTTCTCAAGGAAGGTaGTGTTCAGATCCATGGCAG +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELCSQGR*CSDPWQ
Trigger: CTGCCATGGATCTGAACACCACCTTCCTTGAGAACA...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTACTCTTGAATCCAAGTaGGCTCCTGGCTGTTCTCAA +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELTLESK*APGCSQ
Trigger: TTGAGAACAGCCAGGAGCCCACTTGGATTCAAGAGT...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTAATCTGAAAGGAGTGTaGGGCTGGGGAGCGGAAATA +
Preference number: 4 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALNLKGV*GWGAEI
Trigger: TATTTCCGCTCCCCAGCCCCACACTCCTTTCAGATT...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp GGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTTTATAGGAGATTATGAGGGTTaGGGTTCTGAAGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSWVSIVCTTTRFTGAFIGDYEG*GSEDRE
Trigger: CTCCCTGTCTTCAGAACCCCAACCCTCATAATCTCC...TATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTTCAGAAAGAAACAACTaGGGGCAGGTCCTTCCAGTC +
Preference number: 4 (lower is better)
Translates to: STVCYFSENYIFHYLADISERNN*GQVLPV
Trigger: GACTGGAAGGACCTGCCCCCAGTTGTTTCTTTCTGA...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTCTAACTAAGCCTCTTTaGGGCAGGAGACTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELLTKPL*GRRLWK
Trigger: CTTCCAAAGTCTCCTGCCCCAAAGAGGCTTAGTTAG...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCCTTTCTTCTCCACAGTaGAATTTTTCAAGGGTTACC +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRLSSPQ*NFSRVT
Trigger: GGTAACCCTTGAAAAATTCCACTGTGGAGAAGAAAG...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGCCAAGGGAAGTTTTCTaGAGATCAAAGATGCCGTTG +
Preference number: 4 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRPREVF*RSKMPL
Trigger: CAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGG...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCTTACTTTTATACCTCTaGTCTCCCAGTTTTAACTGG +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRLLLYL*SPSFNW
Trigger: CCAGTTAAAACTGGGAGATCAGAGGTATAAAAGTAA...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATGACGTTTTGAACAGTTaGAACAATATCCTGTACCAT +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNDVLNS*NNILYH
Trigger: ATGGTACAGGATATTGTTTCAACTGTTCAAAACGTC...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR TCA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATTTAGAAGCAAGACAATaGGGCATTGTTTACACAGAA +
Preference number: 4 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNLEARQ*GIVYTE
Trigger: TTCTGTGTAAACAATGCCTCATTGTCTTGCTTCTAA...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTGATGGGCATTTAGACTaGTCCAGTGTCTTTGCTATT +
Preference number: 4 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGDGHLD*SSVFAI
Trigger: AATAGCAAAGACACTGGATCAGTCTAAATGCCCATC...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCACTGAGAATGACAAATaGAGAACCCATGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLTENDK*RTHEIR
Trigger: TCTGATTTCATGGGTTCTGCATTTGTCATTCTCAGT...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR GCA 90 bp GGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTTTATAAACTGTTCCTGCCACTaGGGATTTGCACTCTTACAC +
Preference number: 4 (lower is better)
Translates to: GSWVSIVCTTTRFTGAFINCSCH*GFALLH
Trigger: GTGTAAGAGTGCAAATCCGCAGTGGCAGGAACAGTT...TATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGGTTTATCCAGATCCATaGCTGCATGAAGACCCAAGA +
Preference number: 4 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRVYPDP*LHEDPR
Trigger: TCTTGGGTCTTCATGCAGCCATGGATCTGGATAAAC...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTATCTGGGGGCTTACTTaGGTTCTTTTTCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFIWGLT*VLFHLL
Trigger: AAGAAGGTGAAAAAGAACCCAAGTAAGCCCCCAGAT...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCATCAAGGCTTTGGATTaGCAATACAACTATCTCATC +
Preference number: 4 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRIKALD*QYNYLI
Trigger: GATGAGATAGTTGTATTGCCAATCCAAAGCCTTGAT...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTATCCCGTTCCAGAGTTaGTTCTTTTTCAAGGACTCA +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIIPFQS*FFFKDS
Trigger: TGAGTCCTTGAAAAAGAACCAACTCTGGAACGGGAT...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TCAAAAATACCGCGAATGCTATTGTACTTCTTAATGTGGATTCCCACTGGAAGCGCTCATTATTGTCGATaGAATAGGGATTTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: SKIPRMLLYFLMWIPTGSAHYCR*NRDFEA
Trigger: AGCTTCGAAATCCCTATTCCATCGACAATAATGAGC...GCTTCCAGTGGGAATCCACATTAAGAAGTACAATAGCATTCGCGGTATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTAGTCTTTCACAGTCTTaGGGTTGTTGCTTTTCGCTG +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELSLSQS*GCCFSL
Trigger: CAGCGAAAAGCAACAACCCCAAGACTGTGAAAGACT...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTAATCATGCAGAATTCTaGCTCAGCCAGAAAGCAACC +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELNHAEF*LSQKAT
Trigger: GGTTGCTTTCTGGCTGAGCCAGAATTCTGCATGATT...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTGGAACCAGGAAAACTTaGCAAGACTTCAACATCCCT +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELGTRKT*QDFNIP
Trigger: AGGGATGTTGAAGTCTTGCCAAGTTTTCCTGGTTCC...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCTCCTTCCAAGATTCTTaGGCTCTCAGTGGTAGACTT +
Preference number: 4 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFSFQDS*ALSGRL
Trigger: AAGTCTACCACTGAGAGCCCAAGAATCTTGGAAGGA...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR TCA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTCAAAATTCCAGACAGTaGTCAAAAATACCGCGAATG +
Preference number: 4 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIQNSRQ*SKIPRM
Trigger: CATTCGCGGTATTTTTGATCACTGTCTGGAATTTTG...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTCCCCACCTGCCTTTCTaGAATTATATGTTGACATTT +
Preference number: 4 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFPHLPF*NYMLTF
Trigger: AAATGTCAACATATAATTTCAGAAAGGCAGGTGGGG...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR GCA 90 bp ACACTCTTAGACCACTCATACCTCGTATTAGTTTTTATAGTGATCTTTGCACAGCAAACATCTCTGTCATaGTTCCTCCTGAGACATTCT +
Preference number: 4 (lower is better)
Translates to: TLLDHSYLVLVFIVIFAQQTSLS*FLLRHS
Trigger: AGAATGTCTCAGGAGGAAGCATGACAGAGATGTTTG...CTGTGCAAAGATCACTATAAAAACTAATACGAGGTATGAGTGGTCTAAGAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp GGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTTTATAAAACACAATATTGGGTaGTGCTGTCCAAAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: GSWVSIVCTTTRFTGAFIKHNIG*CCPKSV
Trigger: CACCGACTTTGGACAGCAGCACCCAATATTGTGTTT...TATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp TCAAAAATACCGCGAATGCTATTGTACTTCTTAATGTGGATTCCCACTGGAAGCAAATGCATCAACTCCTaGTGGCCATATTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: SKIPRMLLYFLMWIPTGSKCINS*WPYCRI
Trigger: AATTCTACAATATGGCCAGCAGGAGTTGATGCATTT...GCTTCCAGTGGGAATCCACATTAAGAAGTACAATAGCATTCGCGGTATTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CCA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTTTGATAAGATCTTTTTaGACAGCTTGCGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGLIRSF*TACGCL
Trigger: AAGACAGCCGCAAGCTGTCCAAAAAGATCTTATCAA...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTGGGAGACTGAATGTGTaGCCTTTAAAATGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFGRLNV*PLKCKE
Trigger: TTCTTTGCATTTTAAAGGCCACACATTCAGTCTCCC...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000456504.5
3UTR CAA 72 bp ACTAACAATTGTTTTCTATATACAGTTTATTCAAGGTaGATTCGGTCCTGCTCTTACGTCCCAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TNNCFLYTVYSR*IRSCSYVPAGV
Trigger: AACACCAGCTGGGACGTAAGAGCAGGACCGAATCAACCTTGAATAAACTGTATATAGAAAACAATTGTTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 72 bp CAGGTTTGTTACATAGGTAAACTGTGTCAGAGAGGCTaGTCATACAGATTATTTCATCGCCCATGTATTAAG +
Preference number: 4 (lower is better)
Translates to: QVCYIGKLCQRG*SYRLFHRPCIK
Trigger: CTTAATACATGGGCGATGAAATAATCTGTATGACAAGCCTCTCTGACACAGTTTACCTATGTAACAAACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTGGGAGCGGAAATAACTaGATCTTAATGAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALGSGNN*ILMRVC
Trigger: ACAGACTCTCATTAAGATTCAGTTATTTCCGCTCCC...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR TCA 90 bp ACAGAAGCAGAACCACATAACATTCAGAAATCAGATTCACCAATGATCATGACTTCTCTTGCAGCGCTTTaGTTCTGCGATTTTATTATG +
Preference number: 4 (lower is better)
Translates to: TEAEPHNIQKSDSPMIMTSLAAL*FCDFIM
Trigger: CATAATAAAATCGCAGAATCAAAGCGCTGCAAGAGA...AGTCATGATCATTGGTGAATCTGATTTCTGAATGTTATGTGGTTCTGCTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR GCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTCTTCAATGTCCAAAATaGCCATCCTGTCAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: STVCYFSENYIFHYLADILQCPK*PSCQRS
Trigger: ACTTCTCTGACAGGATGGGCATTTTGGACATTGAAG...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTCCTTCACTTGTAGAATaGCGACGTCTTTCACATCTT +
Preference number: 4 (lower is better)
Translates to: STVCYFSENYIFHYLADIPSLVE*RRLSHL
Trigger: AAGATGTGAAAGACGTCGGCATTCTACAAGTGAAGG...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp ACACTCTTAGACCACTCATACCTCGTATTAGTTTTTATAGTGATCTTTGCACAGTGTAAGCAATATCGCTaGGTAATCTGCTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: TLLDHSYLVLVFIVIFAQCKQYR*VICFLS
Trigger: CGAAAGAAAGCAGATTACCCAGCGATATTGCTTACA...CTGTGCAAAGATCACTATAAAAACTAATACGAGGTATGAGTGGTCTAAGAGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp ACAGAAGCAGAACCACATAACATTCAGAAATCAGATTCACCAATGATCATGACTTTGATAAGATCTTTTTaGACAGCTTGCGGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TEAEPHNIQKSDSPMIMTLIRSF*TACGCL
Trigger: AAGACAGCCGCAAGCTGTCCAAAAAGATCTTATCAA...AGTCATGATCATTGGTGAATCTGATTTCTGAATGTTATGTGGTTCTGCTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp CACAGAAGATTGAGTAACTGGTTTAACAAAAGAGGTTCTTGGGTATCTATTGTATTGTACTTCTTAATGTaGATTCCCACTGGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HRRLSNWFNKRGSWVSIVLYFLM*IPTGSS
Trigger: GCTGCTTCCAGTGGGAATCCACATTAAGAAGTACAA...TACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTACTCAATCTTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp CACAGAAGATTGAGTAACTGGTTTAACAAAAGAGGTTCTTGGGTATCTATTGTAGCTGACATTCCTATTTaGATGCTTTTCAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: HRRLSNWFNKRGSWVSIVADIPI*MLFSHL
Trigger: CAGGTGACTGAAAAGCATCCAAATAGGAATGTCAGC...TACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTACTCAATCTTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 72 bp GATATACTTGATGGCATAAAAATGTTGGGAGTGACCTaGAACCCATTGGCTTCTTGGGCTAATAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: DILDGIKMLGVT*NPLASWANKCF
Trigger: AAAACATTTATTAGCCCAAGAAGCCAATGGGTTCAAGGTCACTCCCAACATTTTTATGCCATCAAGTATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR TCA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTATTCCATTACCTTGCTaGCATTCCTATTTGGATGCT +
Preference number: 4 (lower is better)
Translates to: STVCYFSENYIFHYLADIIPLPC*HSYLDA
Trigger: AGCATCCAAATAGGAATGTCAGCAAGGTAATGGAAT...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTCAGCTTTTAAGGAACTaGATTGTATTCCATATTGCC +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELQLLRN*IVFHIA
Trigger: GGCAATATGGAATACAATGCAGTTCCTTAAAAGCTG...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR GCA 90 bp ACAGAAGCAGAACCACATAACATTCAGAAATCAGATTCACCAATGATCATGACTCAGCTTTTAAGGAACTaGATTGTATTCCATATTGCC +
Preference number: 4 (lower is better)
Translates to: TEAEPHNIQKSDSPMIMTQLLRN*IVFHIA
Trigger: GGCAATATGGAATACAATGCAGTTCCTTAAAAGCTG...AGTCATGATCATTGGTGAATCTGATTTCTGAATGTTATGTGGTTCTGCTTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CCA 90 bp GGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTTTATAGCTCATTATTGTCGATaGAATAGGGATTTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: GSWVSIVCTTTRFTGAFIAHYCR*NRDFEA
Trigger: AGCTTCGAAATCCCTATTCCATCGACAATAATGAGC...TATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTAACCAAATACTTTCATaGGACCCTCATTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFNQILS*DPHFSS
Trigger: ACTTGAAAAATGAGGGTCCCATGAAAGTATTTGGTT...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CCA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTATAATCTCTACGACCTaGCCTGTTAAACATGTATTT +
Preference number: 4 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELIISTT*PVKHVF
Trigger: AAATACATGTTTAACAGGCCAGGTCGTAGAGATTAT...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
3UTR CAA 72 bp GTAACTGGTTTAACAAAAGAGGTTCTTGGGTATCTATaGTATGTACAACTACGAGATTTACTGGAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: VTGLTKEVLGYL*YVQLRDLLELL
Trigger: TAAAAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CCA 90 bp CACAGAAGATTGAGTAACTGGTTTAACAAAAGAGGTTCTTGGGTATCTATTGTACAATTTATATTCCTTTaGGTACATACCCAGTTATGG +
Preference number: 4 (lower is better)
Translates to: HRRLSNWFNKRGSWVSIVQFIFL*VHTQLW
Trigger: CCATAACTGGGTATGTACCCAAAGGAATATAAATTG...TACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTACTCAATCTTCTGTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS GCA 90 bp TGCAAAGCTGGGCAGGCGCGCGCCCCTCACCTGCACCGGACCCGCTaGAGTCGCCACTCGGAAGCGCAGGGAGCAACCCTGACGCGGCGG +
Preference number: 5 (lower is better)
Translates to: CKAGQARAPHLHRTR*SRHSEAQGATLTRR
Trigger: CCGCCGCGTCAGGGTTGCTCCCTGCGCTTCCGAGTGGCGACTGCAGCGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543482.5
CDS GCA 90 bp CCGCGTTCGGGGGCTGCAAAGCTGGGCAGGCGCGCGCCCCTCACCTaGACCGGACCCGCTGCAGTCGCCACTCGGAAGCGCAGGGAGCAA +
Preference number: 5 (lower is better)
Translates to: PRSGAAKLGRRAPLT*TGPAAVATRKRREQ
Trigger: TTGCTCCCTGCGCTTCCGAGTGGCGACTGCAGCGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCAGCCCCCGAACGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543482.5
CDS CCA 90 bp ACTGCAATGACTCCTGTGCGAGGCCGCGTTCGGGGGCTGCAAAGCTaGGCAGGCGCGCGCCCCTCACCTGCACCGGACCCGCTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: TAMTPVRGRVRGLQS*AGARPSPAPDPLQS
Trigger: CGACTGCAGCGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGGAGTCATTGCAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543482.5
CDS CCA 90 bp TTTGTCTGGGTATCTGTGCGAGGCCGCGTTCGGGGGCTGCAAAGCTaGGCAGGCGCGCGCCCCTCACCTGCACCGGACCCGCTGCAGTCG +
Preference number: 5 (lower is better)
Translates to: FVWVSVRGRVRGLQS*AGARPSPAPDPLQS
Trigger: CGACTGCAGCGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGATACCCAGACAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561608.5
CDS GCA 90 bp AGAATCCATTTGTCTGGGTATCTGTGCGAGGCCGCGTTCGGGGGCTaGAAAGCTGGGCAGGCGCGCGCCCCTCACCTGCACCGGACCCGC +
Preference number: 5 (lower is better)
Translates to: RIHLSGYLCEAAFGG*KAGQARAPHLHRTR
Trigger: GCGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGATACCCAGACAAATGGATTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561608.5
CDS TCA 90 bp CTGGGGCCAAGGCCTCAGCCTCCAGGAGATCAGGCACAGAGAGGCTaGGACGGCGGTCCAAGTGATGCCTTGCCCGTAGATCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: LGPRPQPPGDQAQRG*DGGPSDALPVDLGA
Trigger: AGCCCCCAGATCTACGGGCAAGGCATCACTTGGACCGCCGTCTCAGCCTCTCTGTGCCTGATCTCCTGGAGGCTGAGGCCTTGGCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS GCA 90 bp GTGCATCCCCTCCAAGGGAAGTTTTCTGAAGATCAAAGATGCCGTTaGTGGACACCCGTCTCCGCTCAGCAGGAGAGGCATAGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: VHPLQGKFSEDQRCR*WTPVSAQQERHRPP
Trigger: AGGAGGCCTATGCCTCTCCTGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGGAGGGGATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS CCA 90 bp CATCCCCTCCAAGGGAAGTTTTCTGAAGATCAAAGATGCCGTTGCTaGACACCCGTCTCCGCTCAGCAGGAGAGGCATAGGCCTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HPLQGKFSEDQRCRC*TPVSAQQERHRPPL
Trigger: CAGAGGAGGCCTATGCCTCTCCTGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGGAGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS-3UTR CAA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGATTTCAGAAGGACACCTaGGGTACCACTGAAACAGCC +
Preference number: 5 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRFQKDT*GTTETA
Trigger: GGCTGTTTCAGTGGTACCCAAGGTGTCCTTCTGAAA...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS GCA 90 bp CTTCTGGTGCATCCCCTCCAAGGGAAGTTTTCTGAAGATCAAAGATaGCGTTGCTGGACACCCGTCTCCGCTCAGCAGGAGAGGCATAGG +
Preference number: 5 (lower is better)
Translates to: LLVHPLQGKFSEDQR*RCWTPVSAQQERHR
Trigger: CCTATGCCTCTCCTGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGGAGGGGATGCACCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS-3UTR CAA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTGGCAGCTCCAGGCAGTaGGCTTGCTTCAGAGGGAGT +
Preference number: 5 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGGSSRQ*ACFRGS
Trigger: ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCC...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTATGGATGCTGCTGACCTaGCCTTTCACAGGTCTGATG +
Preference number: 5 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVWMLLT*PFTGLM
Trigger: CATCAGACCTGTGAAAGGCAAGGTCAGCAGCATCCA...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGAGCCCCCAGTGTATTTaGTTCCCTTCTACATGTCCA +
Preference number: 5 (lower is better)
Translates to: PSIASNGPCCRLASSTERSPQCI*FPSTCP
Trigger: TGGACATGTAGAAGGGAACAAAATACACTGGGGGCT...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS TCA 90 bp AGCTTCTCTGGCTCTTCTGGTGCATCCCCTCCAAGGGAAGTTTTCTaGAGATCAAAGATGCCGTTGCTGGACACCCGTCTCCGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SFSGSSGASPPREVF*RSKMPLLDTRLRSA
Trigger: TGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGGAGGGGATGCACCAGAAGAGCCAGAGAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS-3UTR CAA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAAATCCCGTTCCAGAGTaGGTTCTTTTTCAAGGACTC +
Preference number: 5 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRNPVPE*VLFQGL
Trigger: GAGTCCTTGAAAAAGAACCAACTCTGGAACGGGATT...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp AGTGGGCTCCTGGCTGTTCTCAAGGAAGGTGGTGTTCAGATCCATGGCAGCCTTCCTGCCACTGCGGATTaGCACTCTTACACAGTGTCT +
Preference number: 5 (lower is better)
Translates to: SGLLAVLKEGGVQIHGSLPATAD*HSYTVS
Trigger: AGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGG...AAGGCTGCCATGGATCTGAACACCACCTTCCTTGAGAACAGCCAGGAGCCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp CCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGAGGTCTGTCTTTAGGTTTTaGAGGAAACACCCACCCTGT +
Preference number: 5 (lower is better)
Translates to: PSIASNGPCCRLASSTERSVFRF*RKHPPC
Trigger: ACAGGGTGGGTGTTTCCTCAAAAACCTAAAGACAGA...CCTCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGATGTTGCTGCATTAGTTaGCTAAGGATAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRCCCIS*LRIMAS
Trigger: GGAGGCCATTATCCTTAGCAAACTAATGCAGCAACA...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp CCAAAGTCGGTGTGTGCCCTAGAGAGCGCTGCGCTTCTTCCGCAGGGGGCTGTGCTTTTGATCAAGGCTTaGGATTGGCAATACAACTAT +
Preference number: 5 (lower is better)
Translates to: PKSVCALESAALLPQGAVLLIKA*DWQYNY
Trigger: ATAGTTGTATTGCCAATCCAAAGCCTTGATCAAAAG...CACAGCCCCCTGCGGAAGAAGCGCAGCGCTCTCTAGGGCACACACCGACTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp AGGAAGTATACAGAGGGTGCCACAGGGCATGCATTTCAGAAGGACACCTTGGGTCCTGCCACTGCGGATTaGCACTCTTACACAGTGTCT +
Preference number: 5 (lower is better)
Translates to: RKYTEGATGHAFQKDTLGPATAD*HSYTVS
Trigger: AGACACTGTGTAAGAGTGCAAATCCGCAGTGGCAGG...ACCCAAGGTGTCCTTCTGAAATGCATGCCCTGTGGCACCCTCTGTATACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTAATCTTTTTGGACAGCTaGCGGCTGTCTTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVIFLDS*RLSSTK
Trigger: CTTTGTTGAAGACAGCCGCAAGCTGTCCAAAAAGAT...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTACAACCAAACACAATATaGGGTGCTGCTGTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVQPNTI*GAAVQS
Trigger: ACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTG...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTAACTCCCAGCTTCGGTaGAGAGAAGACGCCCACCCC +
Preference number: 5 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILNSQLR*REDAHP
Trigger: GGGGTGGGCGTCTTCTCTCAACCGAAGCTGGGAGTT...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS CCA 90 bp GGGAGCAAAGAAATGGTGGACACCCCTGTGCCCTGTACATGTTTCTaGAGGTCTCATTTGATAAGAGTCCCTGGCATGGGTCAGATTGAG +
Preference number: 5 (lower is better)
Translates to: GSKEMVDTPVPCTCF*RSHLIRVPGMGQIE
Trigger: CTCAATCTGACCCATGCCAGGGACTCTTATCAAATGAGACCTCCAGAAACATGTACAGGGCACAGGGGTGTCCACCATTTCTTTGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557505.1
CDS-3UTR CAA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGGGTCCAAGTGATGCCTaGCCCGTAGATCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: RHLILLTTSAFLQYALPLGPSDA*PVDLGA
Trigger: AGCCCCCAGATCTACGGGCAAGGCATCACTTGGACC...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp GGCCATCCATTGCCAGCAATGGACCCTGCTGTAGGCTGGCATCCAGCACCGAGATATATGACTTTACTTTaGTACAGCGTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: GHPLPAMDPAVGWHPAPRYMTLL*YSVFPF
Trigger: GAATGGGAAGACGCTGTACAAAAGTAAAGTCATATA...TCTCGGTGCTGGATGCCAGCCTACAGCAGGGTCCATTGCTGGCAATGGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp CCCAGACAGCTGTCCAGTGGCAGCTCCAGGCAGTTGGCTTGCTTCAGAGGGAGTTATATGACTTTACTTTaGTACAGCGTCTTCCCATTC +
Preference number: 5 (lower is better)
Translates to: PRQLSSGSSRQLACFRGSYMTLL*YSVFPF
Trigger: GAATGGGAAGACGCTGTACAAAAGTAAAGTCATATA...ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCCACTGGACAGCTGTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGCTCCAGGCAGTTGGCTaGCTTCAGAGGGAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: RHLILLTTSAFLQYALPLLQAVG*LQRECR
Trigger: TCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAG...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp TCTTTCAGGGAGTTCTGTAAGCAATATCGCTGGGTAATCTGCTTTCTTTCGCTGCTCCAGGCAGTTGGCTaGCTTCAGAGGGAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: SFREFCKQYRWVICFLSLLQAVG*LQRECR
Trigger: TCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAG...CAGCGAAAGAAAGCAGATTACCCAGCGATATTGCTTACAGAACTCCCTGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp CTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGATTCTGCTCCAGGCAGTTGGCTaGCTTCAGAGGGAGTGCCGA +
Preference number: 5 (lower is better)
Translates to: LSVVDLGGFKISCSALILLQAVG*LQRECR
Trigger: TCGGCACTCCCTCTGAAGCAAGCCAACTGCCTGGAG...CAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAAGGCAGCTCCAGGCAGTaGGCTTGCTTCAGAGGGAGT +
Preference number: 5 (lower is better)
Translates to: KDTLGTTETAITLVYSTKGSSRQ*ACFRGS
Trigger: ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCC...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp TCAACCAAACACAATATTGGGTGCTGCTGTCCAAAGTCGGTGTGTGCCCTAGAGTTCACAGTCTTGGGGTaGTTGCTTTTCGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: STKHNIGCCCPKSVCALEFTVLG*LLFAGL
Trigger: CAGCCCAGCGAAAAGCAACAACCCCAAGACTGTGAA...CTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp CACTTGTGCCACAGCGATCTCGGACAACCAGGTTCCGGCCTTCCTTCAGGTGTAAGATCCATGGCAGCCTaGTTATCTCCTATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: HLCHSDLGQPGSGLPSGVRSMAA*LSPISE
Trigger: TTCTGAAATAGGAGATAACAAGGCTGCCATGGATCT...TACACCTGAAGGAAGGCCGGAACCTGGTTGTCCGAGATCGCTGTGGCACAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp CTTGGGCTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGAGGGGTGGTTCCTCTTaGCGGTGCGCGAATGCTATT +
Preference number: 5 (lower is better)
Translates to: LGLSVVDLGGFKISCSALRGGSS*RCANAI
Trigger: AATAGCATTCGCGCACCGCAAAGAGGAACCACCCCT...CAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAGCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCGGTCCAAGTGATGCCTaGCCCGTAGATCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLGPSDA*PVDLGA
Trigger: AGCCCCCAGATCTACGGGCAAGGCATCACTTGGACC...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAAAGATCAAAGATGCCGTaGCTGGACACCCGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQRSKMP*LDTRLR
Trigger: GCGGAGACGGGTGTCCAGCAACGGCATCTTTGATCT...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGTTTCAGAAGGACACCTaGGGTACCACTGAAACAGCC +
Preference number: 5 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVFQKDT*GTTETA
Trigger: GGCTGTTTCAGTGGTACCCAAGGTGTCCTTCTGAAA...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS GCA 90 bp TCCCCCGGTACCTTCCCGCAACTCAGTCACTTCCTCCTCCAGAAATaGATCAACTCCTGCTGGCCATATTGTAGAATTCAAGTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: SPGTFPQLSHFLLQK*INSCWPYCRIQVCF
Trigger: AAAACAGACTTGAATTCTACAATATGGCCAGCAGGAGTTGATGCATTTCTGGAGGAGGAAGTGACTGAGTTGCGGGAAGGTACCGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCTTCCTGGGCCATCCATaGCCAGCAATGGACCCTGCT +
Preference number: 5 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRFLGHP*PAMDPA
Trigger: AGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGAA...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS TCA 90 bp CATTATTCCTTTCCATTGATCTATGTAACTATTCCAATACCATTTTaGTTGCTGTGCGAGGCCGCGTTCGGGGGCTGCAAAGCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: HYSFPLIYVTIPIPF*LLCEAAFGGCKAGQ
Trigger: CTGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGCAATCAAAATGGTATTGGAATAGTTACATAGATCAATGGAAAGGAATAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS CCA 90 bp TCCGCTGTTTTAATGAGCCCCAAACAGATGGTTTATCCAGATCCATaGCTGCATGAAGACCCAAGAAGCCACTTCTCAGAAGTACACCTC +
Preference number: 5 (lower is better)
Translates to: SAVLMSPKQMVYPDP*LHEDPRSHFSEVHL
Trigger: GAGGTGTACTTCTGAGAAGTGGCTTCTTGGGTCTTCATGCAGCCATGGATCTGGATAAACCATCTGTTTGGGGCTCATTAAAACAGCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357742.9
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS-3UTR CAA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATCAGAGAGCCGTAGGTaGCGTATCAAAGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQSESRR*RIKEDL
Trigger: CAAGTCCTCTTTGATACGCAACCTACGGCTCTCTGA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp ACAGAAGCAGAACCACATAACATTCAGAAATCAGATTCACCAATGATCATGACTGGCAGCTCCAGGCAGTaGGCTTGCTTCAGAGGGAGT +
Preference number: 5 (lower is better)
Translates to: TEAEPHNIQKSDSPMIMTGSSRQ*ACFRGS
Trigger: ACTCCCTCTGAAGCAAGCCAACTGCCTGGAGCTGCC...AGTCATGATCATTGGTGAATCTGATTTCTGAATGTTATGTGGTTCTGCTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTTGCATACTGCACCTTTaGAACATCAGACGGTACCCT +
Preference number: 5 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILCILHL*NIRRYP
Trigger: AGGGTACCGTCTGATGTTCAAAAGGTGCAGTATGCA...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp TCAACCAAACACAATATTGGGTGCTGCTGTCCAAAGTCGGTGTGTGCCCTAGAGGAAACAGCCATAACATaGGTCTACTCAACCAAACAC +
Preference number: 5 (lower is better)
Translates to: STKHNIGCCCPKSVCALEETAIT*VYSTKH
Trigger: GTGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTC...CTCTAGGGCACACACCGACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp AACTGGACTCCTGTGGTCCTCTCACAGCAGTTCTTACAGTTCTCTCCCTTAGTGACAGTTTATTCAAGGTaGATTCGGTCCTGCTCTTAC +
Preference number: 5 (lower is better)
Translates to: NWTPVVLSQQFLQFSPLVTVYSR*IRSCSY
Trigger: GTAAGAGCAGGACCGAATCAACCTTGAATAAACTGT...CACTAAGGGAGAGAACTGTAAGAACTGCTGTGAGAGGACCACAGGAGTCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAATATGAAGGCCTCCACTaGGGTGGTGGAAATCAGAAC +
Preference number: 5 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQYEGLH*GGGNQN
Trigger: GTTCTGATTTCCACCACCCAAGTGGAGGCCTTCATA...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTTTCTTCTTGCTCAAGTaGATCAACAATGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILFFLLK*INNGLV
Trigger: GACCAGGCCATTGTTGATCAACTTGAGCAAGAAGAA...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp TACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACGACAATCCCGTTCCAGAGTaGGTTCTTTTTCAAGGACTC +
Preference number: 5 (lower is better)
Translates to: YRQHRSSTPKQWRTKINDNPVPE*VLFQGL
Trigger: GAGTCCTTGAAAAAGAACCAACTCTGGAACGGGATT...GTCGTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTACAGTCTTGGGGTTGTaGCTTTTCGCTGGGCTGACC +
Preference number: 5 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGTVLGL*LFAGLT
Trigger: GGTCAGCCCAGCGAAAAGCAACAACCCCAAGACTGT...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS TCA 90 bp TTTAATGAGCCCCAAACAGATGGTTTATCCAGATCCATGGCTGCATaGAGACCCAAGAAGCCACTTCTCAGAAGTACACCTCTACTGAAA +
Preference number: 5 (lower is better)
Translates to: FNEPQTDGLSRSMAA*RPKKPLLRSTPLLK
Trigger: TTTCAGTAGAGGTGTACTTCTGAGAAGTGGCTTCTTGGGTCTTCATGCAGCCATGGATCTGGATAAACCATCTGTTTGGGGCTCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357742.9
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS-3UTR CAA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCGACCAACGGTGTCTCTaGAAATCACCCTGTTTTACC +
Preference number: 5 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLDQRCL*KSPCFT
Trigger: GGTAAAACAGGGTGATTTCAAGAGACACCGTTGGTC...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp CTTGTAGAATGCCGACGTCTTTCACATCTTTCAGGGAGTTCTGTAAGCAATATCCGTATCAAAGAGGACTaGCTGGCACTTAATCGCTTC +
Preference number: 5 (lower is better)
Translates to: LVECRRLSHLSGSSVSNIRIKED*LALNRF
Trigger: GAAGCGATTAAGTGCCAGCAAGTCCTCTTTGATACG...GATATTGCTTACAGAACTCCCTGAAAGATGTGAAAGACGTCGGCATTCTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp CGGCATTTGATATTATTGACCACATCAGCTTTCTTGCAGTATGCTCTGCCACTGATCTTTTTGGACAGCTaGCGGCTGTCTTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: RHLILLTTSAFLQYALPLIFLDS*RLSSTK
Trigger: CTTTGTTGAAGACAGCCGCAAGCTGTCCAAAAAGAT...CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAACTTGATAAGATCTTTTaGGACAGCTTGCGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: KDTLGTTETAITLVYSTKLDKIF*DSLRLS
Trigger: AGACAGCCGCAAGCTGTCCAAAAAGATCTTATCAAG...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp CTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTTGATTCTGCTTGATAAGATCTTTTaGGACAGCTTGCGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LSVVDLGGFKISCSALILLDKIF*DSLRLS
Trigger: AGACAGCCGCAAGCTGTCCAAAAAGATCTTATCAAG...CAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTTGGATGCTGCTGACCTaGCCTTTCACAGGTCTGATG +
Preference number: 5 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIWMLLT*PFTGLM
Trigger: CATCAGACCTGTGAAAGGCAAGGTCAGCAGCATCCA...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTTTCCTGGGCCATCCATaGCCAGCAATGGACCCTGCT +
Preference number: 5 (lower is better)
Translates to: STVCYFSENYIFHYLADIFLGHP*PAMDPA
Trigger: AGCAGGGTCCATTGCTGGCAATGGATGGCCCAGGAA...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTTCACATAAGGATCACTaGTGCCACAGCGATCTCGGA +
Preference number: 5 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFSHKDH*CHSDLG
Trigger: TCCGAGATCGCTGTGGCACAAGTGATCCTTATGTGA...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp GTAGGCTGGCATCCAGCACCGAGAGGTTTCCCAAAAATTCACATACATATCCTTGATCAAGGCTTTGGATaGGCAATACAACTATCTCAT +
Preference number: 5 (lower is better)
Translates to: VGWHPAPRGFPKIHIHILDQGFG*AIQLSH
Trigger: ATGAGATAGTTGTATTGCCAATCCAAAGCCTTGATC...AAGGATATGTATGTGAATTTTTGGGAAACCTCTCGGTGCTGGATGCCAGCCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCCTTGATAAGATCTTTTaGGACAGCTTGCGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLLDKIF*DSLRLS
Trigger: AGACAGCCGCAAGCTGTCCAAAAAGATCTTATCAAG...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp AAGGACACCTTGGGTACCACTGAAACAGCCATAACATTGGTCTACTCAACCAAATTTTTCTCAGATTCCTaGTCATCTTCATCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: KDTLGTTETAITLVYSTKFFSDS*SSSSSS
Trigger: CGAGGAGGATGAAGATGACAAGGAATCTGAGAAAAA...TTTGGTTGAGTAGACCAATGTTATGGCTGTTTCAGTGGTACCCAAGGTGTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTGGGAACCAGGAAAACTaGGCAAGACTTCAACATCCC +
Preference number: 5 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFGNQEN*ARLQHP
Trigger: GGGATGTTGAAGTCTTGCCAAGTTTTCCTGGTTCCC...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS GCA 90 bp ATTCTTGGGCTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTaGAGCGCTTTGATTCTGCGATTTTATTATGCTCATAAGGATGGG +
Preference number: 5 (lower is better)
Translates to: ILGLSVVDLGGFKIS*SALILRFYYAHKDG
Trigger: CCCATCCTTATGAGCATAATAAAATCGCAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAGCCCAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTCGTTCCTCATGCTTTTaGTTGTCCTTTCCCCACACT +
Preference number: 5 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFRSSCF*LSFPHT
Trigger: AGTGTGGGGAAAGGACAACAAAAAGCATGAGGAACG...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp GATATACTTGATGGCATAAAAATGTTGGGAGTGACCTTGAACCCATTGGCTTCTATCTTTTTGGACAGCTaGCGGCTGTCTTCAACAAAG +
Preference number: 5 (lower is better)
Translates to: DILDGIKMLGVTLNPLASIFLDS*RLSSTK
Trigger: CTTTGTTGAAGACAGCCGCAAGCTGTCCAAAAAGAT...AGAAGCCAATGGGTTCAAGGTCACTCCCAACATTTTTATGCCATCAAGTATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp CCACACTTCAATGTCCAAAATGCCCATCCTGTCAGAGAAGTAGTGAAAGTCAAACACGGTCCACATCTCTaGATAAGATCTTTTTGGACA +
Preference number: 5 (lower is better)
Translates to: PHFNVQNAHPVREVVKVKHGPHL*IRSFWT
Trigger: TGTCCAAAAAGATCTTATCAAGAGATGTGGACCGTG...TTTGACTTTCACTACTTCTCTGACAGGATGGGCATTTTGGACATTGAAGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp TATACCTCTGATCTCCCAGTTTTAACTGGACAAACATCTCTGTCATGCTTCCTCTTTTTCTCAGATTCCTaGTCATCTTCATCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: YTSDLPVLTGQTSLSCFLFFSDS*SSSSSS
Trigger: CGAGGAGGATGAAGATGACAAGGAATCTGAGAAAAA...GAGGAAGCATGACAGAGATGTTTGTCCAGTTAAAACTGGGAGATCAGAGGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATGAAACAGCCATAACATaGGTCTACTCAACCAAACAC +
Preference number: 5 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNETAIT*VYSTKH
Trigger: GTGTTTGGTTGAGTAGACCAATGTTATGGCTGTTTC...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTTTCACAGTCTTGGGGTaGTTGCTTTTCGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALFTVLG*LLFAGL
Trigger: CAGCCCAGCGAAAAGCAACAACCCCAAGACTGTGAA...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGCGTCCCAGCTGGTGTTaGGGTCCTAAACTTAACACT +
Preference number: 5 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRRPSWC*GPKLNT
Trigger: AGTGTTAAGTTTAGGACCCAAACACCAGCTGGGACG...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp TACAGGCAGCATAGGTCCTCTACACCGAAGCAGTGGAGAACTAAAATAAACGACATCTCTTGCAGCGCTTaGATTCTGCGATTTTATTAT +
Preference number: 5 (lower is better)
Translates to: YRQHRSSTPKQWRTKINDISCSA*ILRFYY
Trigger: ATAATAAAATCGCAGAATCAAAGCGCTGCAAGAGAT...GTCGTTTATTTTAGTTCTCCACTGCTTCGGTGTAGAGGACCTATGCTGCCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCATGTTGGGAGTGACCTaGAACCCATTGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFMLGVT*NPLASW
Trigger: CCAAGAAGCCAATGGGTTCAAGGTCACTCCCAACAT...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTTTCTTCTTGCTCAAGTaGATCAACAATGGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGFFLLK*INNGLV
Trigger: GACCAGGCCATTGTTGATCAACTTGAGCAAGAAGAA...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGGACCAACGGTGTCTCTaGAAATCACCCTGTTTTACC +
Preference number: 5 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRDQRCL*KSPCFT
Trigger: GGTAAAACAGGGTGATTTCAAGAGACACCGTTGGTC...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGCGTATCAAAGAGGACTaGCTGGCACTTAATCGCTTC +
Preference number: 5 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRRIKED*LALNRF
Trigger: GAAGCGATTAAGTGCCAGCAAGTCCTCTTTGATACG...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGCGTTCCTCATGCTTTTaGTTGTCCTTTCCCCACACT +
Preference number: 5 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRRSSCF*LSFPHT
Trigger: AGTGTGGGGAAAGGACAACAAAAAGCATGAGGAACG...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp ACACTCTTAGACCACTCATACCTCGTATTAGTTTTTATAGTGATCTTTGCACAGCGTTCCTCATGCTTTTaGTTGTCCTTTCCCCACACT +
Preference number: 5 (lower is better)
Translates to: TLLDHSYLVLVFIVIFAQRSSCF*LSFPHT
Trigger: AGTGTGGGGAAAGGACAACAAAAAGCATGAGGAACG...CTGTGCAAAGATCACTATAAAAACTAATACGAGGTATGAGTGGTCTAAGAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATTACATAACAATTCGGTaGTCCATCTCTAATGGACAG +
Preference number: 5 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNYITIR*SISNGQ
Trigger: CTGTCCATTAGAGATGGACAACCGAATTGTTATGTA...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGTGCATACTGCACCTTTaGAACATCAGACGGTACCCT +
Preference number: 5 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRCILHL*NIRRYP
Trigger: AGGGTACCGTCTGATGTTCAAAAGGTGCAGTATGCA...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTCAACCAAACACAATATaGGGTGCTGCTGTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIQPNTI*GAAVQS
Trigger: ACTTTGGACAGCAGCACCCAATATTGTGTTTGGTTG...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp AAAGAGGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTGAAGTGGTTAATGCATaGACACTGGACCTACTAGGC +
Preference number: 5 (lower is better)
Translates to: KEVLGYLLYVQLRDLLELEVVNA*TLDLLG
Trigger: GCCTAGTAGGTCCAGTGTCAATGCATTAACCACTTC...AAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACCTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp ATTTCTACCATTCCACTGAAATGGCTTGTTGCCAGGGTGCTTCCAAACTGTCAAATGTTTGCCTTTAACTaGTGTACATCTCAAGTACAG +
Preference number: 5 (lower is better)
Translates to: ISTIPLKWLVARVLPNCQMFAFN*CTSQVQ
Trigger: CTGTACTTGAGATGTACACAAGTTAAAGGCAAACAT...TTGACAGTTTGGAAGCACCCTGGCAACAAGCCATTTCAGTGGAATGGTAGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTACCACATCAGCTTTCTaGCAGTATGCTCTGCCACTG +
Preference number: 5 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALTTSAF*QYALPL
Trigger: CAGTGGCAGAGCATACTGCAAGAAAGCTGATGTGGT...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATCCCATGAAGAATTTTTaGCAGCTAATAGGGTTACAC +
Preference number: 5 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNPMKNF*QLIGLH
Trigger: GTGTAACCCTATTAGCTGCAAAAAATTCTTCATGGG...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp TTTGGACAGAGGATGACTACCAAAGACTTGTTAACTCTGAGAAGAGACTTACGCGAGAACATGTGGTATTaGGTTTTCTGTTGCTGCATT +
Preference number: 5 (lower is better)
Translates to: FGQRMTTKDLLTLRRDLRENMWY*VFCCCI
Trigger: AATGCAGCAACAGAAAACCAAATACCACATGTTCTC...GCGTAAGTCTCTTCTCAGAGTTAACAAGTCTTTGGTAGTCATCCTCTGTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS TCA 90 bp GAAACCAGGCCTACACTAAGAGGAAATATGGCTATTCTTGAGCCCTaGAAACATAGTCTCTTTGAGATCTTTTACAAAAACAGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: ETRPTLRGNMAILEP*KHSLFEIFYKNSSK
Trigger: CTTGGAGCTGTTTTTGTAAAAGATCTCAAAGAGACTATGTTTTCAGGGCTCAAGAATAGCCATATTTCCTCTTAGTGTAGGCCTGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS GCA 90 bp AAGACCCAAGAAGCCACTTCTCAGAAGTACACCTCTACTGAAAACTaGAATGACTCTGAATTGCTCTTGTACTTTCATCAAAAATCTCTG +
Preference number: 5 (lower is better)
Translates to: KTQEATSQKYTSTEN*NDSELLLYFHQKSL
Trigger: CAGAGATTTTTGATGAAAGTACAAGAGCAATTCAGAGTCATTGCAGTTTTCAGTAGAGGTGTACTTCTGAGAAGTGGCTTCTTGGGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS-3UTR CAA 90 bp AAAGATACATTTGGGCAGCCAAAGTATTTCTACTTCCTGCTTAAAACATTCAGGAATCCCGTTCCAGAGTaGGTTCTTTTTCAAGGACTC +
Preference number: 5 (lower is better)
Translates to: KDTFGQPKYFYFLLKTFRNPVPE*VLFQGL
Trigger: GAGTCCTTGAAAAAGAACCAACTCTGGAACGGGATT...CCTGAATGTTTTAAGCAGGAAGTAGAAATACTTTGGCTGCCCAAATGTATCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp TCTCCTATTTCAGAATGGATGTTAGTCTTTCACAGTCTTGGGGTTGTTGCTTTTCACGGTCCACATCTCTaGATAAGATCTTTTTGGACA +
Preference number: 5 (lower is better)
Translates to: SPISEWMLVFHSLGVVAFHGPHL*IRSFWT
Trigger: TGTCCAAAAAGATCTTATCAAGAGATGTGGACCGTG...AAAAGCAACAACCCCAAGACTGTGAAAGACTAACATCCATTCTGAAATAGGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp TGCAGGAGACAGATGCTATCAAATGAGGACTCTGGGGTGGTATTTTCTAGAAATATACCGCGAATGCTATaGTACTTCTTAATGTGGATT +
Preference number: 5 (lower is better)
Translates to: CRRQMLSNEDSGVVFSRNIPRML*YFLMWI
Trigger: AATCCACATTAAGAAGTACAATAGCATTCGCGGTAT...ATTTCTAGAAAATACCACCCCAGAGTCCTCATTTGATAGCATCTGTCTCCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357742.9
ENST00000456504.5
CDS-3UTR CAA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCGTGACCTTGAACCCATaGGCTTCTTGGGCTAATAAA +
Preference number: 5 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFVTLNP*ASWANK
Trigger: TTTATTAGCCCAAGAAGCCAATGGGTTCAAGGTCAC...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp ACACTCTTAGACCACTCATACCTCGTATTAGTTTTTATAGTGATCTTTGCACAGGATGGCATAAAAATGTaGGGAGTGACCTTGAACCCA +
Preference number: 5 (lower is better)
Translates to: TLLDHSYLVLVFIVIFAQDGIKM*GVTLNP
Trigger: TGGGTTCAAGGTCACTCCCAACATTTTTATGCCATC...CTGTGCAAAGATCACTATAAAAACTAATACGAGGTATGAGTGGTCTAAGAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp AAGCAACCCAGTGAGATACAACATGAAGAAAAACAGACACGGGATGATAAGATTGATCAAGGCTTTGGATaGGCAATACAACTATCTCAT +
Preference number: 5 (lower is better)
Translates to: KQPSEIQHEEKQTRDDKIDQGFG*AIQLSH
Trigger: ATGAGATAGTTGTATTGCCAATCCAAAGCCTTGATC...AATCTTATCATCCCGTGTCTGTTTTTCTTCATGTTGTATCTCACTGGGTTGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCCACGGTCCACATCTCTaGATAAGATCTTTTTGGACA +
Preference number: 5 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFHGPHL*IRSFWT
Trigger: TGTCCAAAAAGATCTTATCAAGAGATGTGGACCGTG...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp TCAAAAATACCGCGAATGCTATTGTACTTCTTAATGTGGATTCCCACTGGAAGCATACCGCGAATGCTATaGTACTTCTTAATGTGGATT +
Preference number: 5 (lower is better)
Translates to: SKIPRMLLYFLMWIPTGSIPRML*YFLMWI
Trigger: AATCCACATTAAGAAGTACAATAGCATTCGCGGTAT...GCTTCCAGTGGGAATCCACATTAAGAAGTACAATAGCATTCGCGGTATTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS-3UTR CAA 90 bp AGTAGAACAATTTATATTCCTTTGGGTACATACCCAGTTATGGGATTGCTGGGTCGGCATTTGATATTATaGACCACATCAGCTTTCTTG +
Preference number: 5 (lower is better)
Translates to: SRTIYIPLGTYPVMGLLGRHLIL*TTSAFL
Trigger: CAAGAAAGCTGATGTGGTCAATAATATCAAATGCCG...ACCCAGCAATCCCATAACTGGGTATGTACCCAAAGGAATATAAATTGTTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCGGTGCGCGAATGCTATaGTACTTCTTAATGTGGATT +
Preference number: 5 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFGARML*YFLMWI
Trigger: AATCCACATTAAGAAGTACAATAGCATTCGCGCACC...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp ATGAATGGCATGATACCAAATATACAAAGATTTGCAGTCGGGAGACTTGATTTCTACATAACAATTCGGTaGTCCATCTCTAATGGACAG +
Preference number: 5 (lower is better)
Translates to: MNGMIPNIQRFAVGRLDFYITIR*SISNGQ
Trigger: CTGTCCATTAGAGATGGACAACCGAATTGTTATGTA...GAAATCAAGTCTCCCGACTGCAAATCTTTGTATATTTGGTATCATGCCATTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS-3UTR CAA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTAGATCCATGGCAGCCTaGTTATCTCCTATTTCAGAA +
Preference number: 5 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALRSMAA*LSPISE
Trigger: TTCTGAAATAGGAGATAACAAGGCTGCCATGGATCT...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp TGTATGTACAACTACGAGATTTACTGGAGCTTTTATAATTTCTGCAAGGCTCTTTACATAACAATTCGGTaGTCCATCTCTAATGGACAG +
Preference number: 5 (lower is better)
Translates to: CMYNYEIYWSFYNFCKALYITIR*SISNGQ
Trigger: CTGTCCATTAGAGATGGACAACCGAATTGTTATGTA...AAGAGCCTTGCAGAAATTATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp AGTACAGTGTGTTACTTCTCTGAGAACTATATATTCCATTACCTTGCTGACATTCTTTTGATCAAGGCTTaGGATTGGCAATACAACTAT +
Preference number: 5 (lower is better)
Translates to: STVCYFSENYIFHYLADILLIKA*DWQYNY
Trigger: ATAGTTGTATTGCCAATCCAAAGCCTTGATCAAAAG...AATGTCAGCAAGGTAATGGAATATATAGTTCTCAGAGAAGTAACACACTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp CACAGAAGATTGAGTAACTGGTTTAACAAAAGAGGTTCTTGGGTATCTATTGTAGTTCTTGGGTATCTATaGTATGTACAACTACGAGAT +
Preference number: 5 (lower is better)
Translates to: HRRLSNWFNKRGSWVSIVVLGYL*YVQLRD
Trigger: ATCTCGTAGTTGTACATACAATAGATACCCAAGAAC...TACAATAGATACCCAAGAACCTCTTTTGTTAAACCAGTTACTCAATCTTCTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS-3UTR CAA 90 bp GGTTCTTGGGTATCTATTGTATGTACAACTACGAGATTTACTGGAGCTTTTATATTGCTAGGCTATCCATaGCAGCTAGAATATTTTTCA +
Preference number: 5 (lower is better)
Translates to: GSWVSIVCTTTRFTGAFILLGYP*QLEYFS
Trigger: TGAAAAATATTCTAGCTGCAATGGATAGCCTAGCAA...TATAAAAGCTCCAGTAAATCTCGTAGTTGTACATACAATAGATACCCAAGAACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357742.9
CDS GCA 72 bp GGGCAGGCGCGCGCCCCTCACCTGCACCGGACCCGCTaGAGTCGCCACTCGGAAGCGCAGGGAGCAACCCTG +
Preference number: 6 (lower is better)
Translates to: GQARAPHLHRTR*SRHSEAQGATL
Trigger: CAGGGTTGCTCCCTGCGCTTCCGAGTGGCGACTGCAGCGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543482.5
CDS GCA 72 bp GGGGCTGCAAAGCTGGGCAGGCGCGCGCCCCTCACCTaGACCGGACCCGCTGCAGTCGCCACTCGGAAGCGC +
Preference number: 6 (lower is better)
Translates to: GAAKLGRRAPLT*TGPAAVATRKR
Trigger: GCGCTTCCGAGTGGCGACTGCAGCGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCAGCCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS CCA 72 bp ACTCCTGTGCGAGGCCGCGTTCGGGGGCTGCAAAGCTaGGCAGGCGCGCGCCCCTCACCTGCACCGGACCCG +
Preference number: 6 (lower is better)
Translates to: TPVRGRVRGLQS*AGARPSPAPDP
Trigger: CGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGGAGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543482.5
CDS CCA 72 bp GTATCTGTGCGAGGCCGCGTTCGGGGGCTGCAAAGCTaGGCAGGCGCGCGCCCCTCACCTGCACCGGACCCG +
Preference number: 6 (lower is better)
Translates to: VSVRGRVRGLQS*AGARPSPAPDP
Trigger: CGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGATAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561608.5
CDS CCA 72 bp ATTGCTGTGCGAGGCCGCGTTCGGGGGCTGCAAAGCTaGGCAGGCGCGCGCCCCTCACCTGCACCGGACCCG +
Preference number: 6 (lower is better)
Translates to: IAVRGRVRGLQS*AGARPSPAPDP
Trigger: CGGGTCCGGTGCAGGTGAGGGGCGCGCGCCTGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGCAAT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS GCA 72 bp GTGGCCTTTAAAATGCAAAGAAATTCTGGGCCAGGCTaGCCTCCCCTAGTGCGCCTTCCAGTACGCCACGCC +
Preference number: 6 (lower is better)
Translates to: VAFKMQRNSGPG*PPLVRLPVRHA
Trigger: GGCGTGGCGTACTGGAAGGCGCACTAGGGGAGGGCAGCCTGGCCCAGAATTTCTTTGCATTTTAAAGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456504.5
CDS GCA 72 bp CATCCCCTCCAAGGGAAGTTTTCTGAAGATCAAAGATaGCGTTGCTGGACACCCGTCTCCGCTCAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: HPLQGKFSEDQR*RCWTPVSAQQE
Trigger: CTCCTGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGGAGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS TCA 72 bp GGCTCTTCTGGTGCATCCCCTCCAAGGGAAGTTTTCTaGAGATCAAAGATGCCGTTGCTGGACACCCGTCTC +
Preference number: 6 (lower is better)
Translates to: GSSGASPPREVF*RSKMPLLDTRL
Trigger: GAGACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGGAGGGGATGCACCAGAAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS GCA 72 bp CTCCAAGGGAAGTTTTCTGAAGATCAAAGATGCCGTTaGTGGACACCCGTCTCCGCTCAGCAGGAGAGGCAT +
Preference number: 6 (lower is better)
Translates to: LQGKFSEDQRCR*WTPVSAQQERH
Trigger: ATGCCTCTCCTGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGAAAACTTCCCTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS CCA 72 bp CAAGGGAAGTTTTCTGAAGATCAAAGATGCCGTTGCTaGACACCCGTCTCCGCTCAGCAGGAGAGGCATAGG +
Preference number: 6 (lower is better)
Translates to: QGKFSEDQRCRC*TPVSAQQERHR
Trigger: CCTATGCCTCTCCTGCTGAGCGGAGACGGGTGTCCAGCAACGGCATCTTTGATCTTCAGAAAACTTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357742.9
ENST00000451018.7
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS GCA 72 bp TATTCAAATTTTAGAATCCATTTGTCTGGGTATCTGTaGGAGGCCGCGTTCGGGGGCTGCAAAGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: YSNFRIHLSGYL*EAAFGGCKAGQ
Trigger: CTGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGATACCCAGACAAATGGATTCTAAAATTTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561608.5
CDS TCA 72 bp CCCCAAACAGATGGTTTATCCAGATCCATGGCTGCATaGAGACCCAAGAAGCCACTTCTCAGAAGTACACCT +
Preference number: 6 (lower is better)
Translates to: PQTDGLSRSMAA*RPKKPLLRSTP
Trigger: AGGTGTACTTCTGAGAAGTGGCTTCTTGGGTCTTCATGCAGCCATGGATCTGGATAAACCATCTGTTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357742.9
ENST00000456504.5
ENST00000543482.5
ENST00000556363.5
ENST00000561608.5
CDS CCA 72 bp GTCACCAGAGAAAAGGGTACATTTCATAGACAGGGGTaGTTCCTCTTTGCGGTGCGCGAATGCTATTGTACT +
Preference number: 6 (lower is better)
Translates to: VTREKGTFHRQG*FLFAVRECYCT
Trigger: AGTACAATAGCATTCGCGCACCGCAAAGAGGAACCACCCCTGTCTATGAAATGTACCCTTTTCTCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS CAA 90 bp TCATTATTCCTTTCCATTGATCTATGTAACTATTCCAATACCATTTaGATTGCTGTGCGAGGCCGCGTTCGGGGGCTGCAAAGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SLFLSIDLCNYSNTI*IAVRGRVRGLQSWA
Trigger: TGCCCAGCTTTGCAGCCCCCGAACGCGGCCTCGCACAGCAATCAAAATGGTATTGGAATAGTTACATAGATCAATGGAAAGGAATAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS CAA 72 bp CTTTCCATTGATCTATGTAACTATTCCAATACCATTTaGATTGCTGTGCGAGGCCGCGTTCGGGGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: LSIDLCNYSNTI*IAVRGRVRGLQ
Trigger: TTGCAGCCCCCGAACGCGGCCTCGCACAGCAATCAAAATGGTATTGGAATAGTTACATAGATCAATGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS GCA 72 bp CTGACACTGAATCCAGAGTCACGGATGCAGCAGCAATaGTGTCAAGATCAAGAAGAAGCTAAAGAAAATCCC +
Preference number: 6 (lower is better)
Translates to: LTLNPESRMQQQ*CQDQEEAKENP
Trigger: GGGATTTTCTTTAGCTTCTTCTTGATCTTGACAGCATTGCTGCTGCATCCGTGACTCTGGATTCAGTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS CAA 90 bp GTCAGATTGAGTCTAGAAGGGTACTGTCTCCACTTTGCTCATTCCTaGGGGGTATTTTCAACCACTGCAGAGATTGAGGTTCATGAATTT +
Preference number: 6 (lower is better)
Translates to: VRLSLEGYCLHFAHS*GVFSTTAEIEVHEF
Trigger: AAATTCATGAACCTCAATCTCTGCAGTGGTTGAAAATACCCCCAAGGAATGAGCAAAGTGGAGACAGTACCCTTCTAGACTCAATCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557505.1
CDS CAA 90 bp CTCTCAGTGGTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTaGATTCTGCGATTTTATTATGCTCATAAGGATGGGCCAATGTCA +
Preference number: 6 (lower is better)
Translates to: LSVVDLGGFKISCSA*ILRFYYAHKDGPMS
Trigger: TGACATTGGCCCATCCTTATGAGCATAATAAAATCGCAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTACCACTGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS GCA 72 bp GAAGCCACTTCTCAGAAGTACACCTCTACTGAAAACTaGAATGACTCTGAATTGCTCTTGTACTTTCATCAA +
Preference number: 6 (lower is better)
Translates to: EATSQKYTSTEN*NDSELLLYFHQ
Trigger: TTGATGAAAGTACAAGAGCAATTCAGAGTCATTGCAGTTTTCAGTAGAGGTGTACTTCTGAGAAGTGGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS CAA 72 bp GTAGACTTAGGTGGTTTTAAGATCTCTTGCAGCGCTTaGATTCTGCGATTTTATTATGCTCATAAGGATGGG +
Preference number: 6 (lower is better)
Translates to: VDLGGFKISCSA*ILRFYYAHKDG
Trigger: CCCATCCTTATGAGCATAATAAAATCGCAGAATCAAAGCGCTGCAAGAGATCTTAAAACCACCTAAGTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557742.1
CDS CAA 72 bp CTATTCACTTCCTACAATGCTACCAACTACCATATATaGAGTGTCTCTACCCAATTCCAAGCACCATATTTG +
Preference number: 6 (lower is better)
Translates to: LFTSYNATNYHI*SVSTQFQAPYL
Trigger: CAAATATGGTGCTTGGAATTGGGTAGAGACACTCAATATATGGTAGTTGGTAGCATTGTAGGAAGTGAATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS CAA 90 bp ACTTCTCAGAAGTACACCTCTACTGAAAACTGCAATGACTCTGAATaGCTCTTGTACTTTCATCAAAAATCTCTGCTACATCTGTGTAGT +
Preference number: 6 (lower is better)
Translates to: TSQKYTSTENCNDSE*LLYFHQKSLLHLCS
Trigger: ACTACACAGATGTAGCAGAGATTTTTGATGAAAGTACAAGAGCAATTCAGAGTCATTGCAGTTTTCAGTAGAGGTGTACTTCTGAGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556363.5
CDS CAA 72 bp AAGTACACCTCTACTGAAAACTGCAATGACTCTGAATaGCTCTTGTACTTTCATCAAAAATCTCTGCTACAT +
Preference number: 6 (lower is better)
Translates to: KYTSTENCNDSE*LLYFHQKSLLH
Trigger: ATGTAGCAGAGATTTTTGATGAAAGTACAAGAGCAATTCAGAGTCATTGCAGTTTTCAGTAGAGGTGTACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556363.5