Pregenerated sensors for MCRIP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000172366Ensembl transcript IDs: ENST00000491999.5, ENST00000575894.1, ENST00000615744.4, ENST00000619114.1, ENST00000619377.1, ENST00000619674.1, ENST00000620462.4
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGACTACAGCCGGAGGTGGGAGCCGGGAGTCCTGGGCTGCGCCTaGTCCGCCAGGCACTCGCGGTCCCGGCCGGCCTGTTGCCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LDYSRRWEPGVLGCA*SARHSRSRPACCLP Trigger: AGGAAGGCAACAGGCCGGCCGGGACCGCGAGTGCCTGGCGGAGCAGGCGCAGCCCAGGACTCCCGGCTCCCACCTCCGGCTGTAGTCCAG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491999.5 |
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| 3UTR CCA 72 bp | CCCTGGACTACAGCCGGAGGTGGGAGCCGGGAGTCCTaGGCTGCGCCTGCTCCGCCAGGCACTCGCGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: PWTTAGGGSRES*AAPAPPGTRGP Trigger: GGGACCGCGAGTGCCTGGCGGAGCAGGCGCAGCCCAGGACTCCCGGCTCCCACCTCCGGCTGTAGTCCAGGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491999.5 |
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| 3UTR CCA 72 bp | CAGGCACTCGCGGTCCCGGCCGGCCTGTTGCCTTCCTaGGCTCAGGTGCCCCAGCGCCGCTCTCGGTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: QALAVPAGLLPS*AQVPQRRSRFL Trigger: GAGGAACCGAGAGCGGCGCTGGGGCACCTGAGCCCAGGAAGGCAACAGGCCGGCCGGGACCGCGAGTGCCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000491999.5 |
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| CDS GCA 90 bp | TCCTCTTTCCTGTGCCCTCGCGGTCCCGCCAGCTGGGTCCTCCTATaGAGTCGCCAGCTCCCTTGCGCTGAGCCCGGCGCCAGCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: SSFLCPRGPASWVLL*SRQLPCAEPGASGG Trigger: GCCGCCGCTGGCGCCGGGCTCAGCGCAAGGGAGCTGGCGACTGCATAGGAGGACCCAGCTGGCGGGACCGCGAGGGCACAGGAAAGAGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619377.1 |
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| CDS GCA 90 bp | AGGCACTCGCGGTCCCGGCCGGCCTGTTGCCTTCCTGGGCTCAGGTaGCCCAGCGCCGCTCTCGGTTCCTCCTCAGCTGAGAGGGGCACT | + |
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Preference number: 5 (lower is better) Translates to: RHSRSRPACCLPGLR*PSAALGSSSAERGT Trigger: AGTGCCCCTCTCAGCTGAGGAGGAACCGAGAGCGGCGCTGGGGCACCTGAGCCCAGGAAGGCAACAGGCCGGCCGGGACCGCGAGTGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000491999.5 ENST00000615744.4 ENST00000619674.1 ENST00000620462.4 |
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| CDS GCA 90 bp | CGGATGGACCTGGACGGGAACGGGGGCCTTTGCCCTCTCCCTGGCTaGCCCCACGTCCCATGGGATGAGGACTGGGTGCCGGGATGGGCA | + |
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Preference number: 5 (lower is better) Translates to: RMDLDGNGGLCPLPG*PHVPWDEDWVPGWA Trigger: TGCCCATCCCGGCACCCAGTCCTCATCCCATGGGACGTGGGGGCAGCCAGGGAGAGGGCAAAGGCCCCCGTTCCCGTCCAGGTCCATCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS TCA 90 bp | CACGTCTCCCCCACTGAGCTCTGCAAGGGCAGAGCCGGGAGATCTTaGGGACCAGCGCCCGACGCTCTCCGCGAACCGTGGCCTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: HVSPTELCKGRAGRS*GPAPDALREPWPGP Trigger: AGGCCCAGGCCACGGTTCGCGGAGAGCGTCGGGCGCTGGTCCTCAAGATCTCCCGGCTCTGCCCTTGCAGAGCTCAGTGGGGGAGACGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS GCA 90 bp | TTGAGGACCAGCGCCCGACGCTCTCCGCGAACCGTGGCCTGGGCCTaGTGCACGTCAGGGTTCCAGCAGCAACCCAAGGTCGCCCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: LRTSARRSPRTVAWA*CTSGFQQQPKVARS Trigger: GCTTCGGGCGACCTTGGGTTGCTGCTGGAACCCTGACGTGCAGCAGGCCCAGGCCACGGTTCGCGGAGAGCGTCGGGCGCTGGTCCTCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CCA 90 bp | TTCCAGCAGCAACCCAAGGTCGCCCGAAGCACCGACCTCGGACGCTaGAGGCCCCTGCGACCCAGGAACTGGCCGGCTTTCTCCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: FQQQPKVARSTDLGR*RPLRPRNWPAFSPL Trigger: CAGCGGGGAGAAAGCCGGCCAGTTCCTGGGTCGCAGGGGCCTCCAGCGTCCGAGGTCGGTGCTTCGGGCGACCTTGGGTTGCTGCTGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615744.4 |
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| CDS GCA 90 bp | ACTGCAGGAAGGGAGGAGACGGACATGGTTGGTGCCCATCCCAGGTaGGGTGCTGCCTGGCAGAACTCAGGAGCAGCCCCGGGCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: TAGREETDMVGAHPR*GAAWQNSGAAPGQP Trigger: GGGCTGGCCCGGGGCTGCTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTCCCTTCCTGCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CCA 90 bp | GAGATCTTGAGGACCAGCGCCCGACGCTCTCCGCGAACCGTGGCCTaGGCCTGCTGCACGTCAGGGTTCCAGCAGCAACCCAAGGTCGCC | + |
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Preference number: 5 (lower is better) Translates to: EILRTSARRSPRTVA*ACCTSGFQQQPKVA Trigger: GGCGACCTTGGGTTGCTGCTGGAACCCTGACGTGCAGCAGGCCCAGGCCACGGTTCGCGGAGAGCGTCGGGCGCTGGTCCTCAAGATCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS GCA 90 bp | GTTTCCCTCCATGGACGGATGGACCTGGACGGGAACGGGGGCCTTTaGCCTCTCCCTGGCTGCCCCCACGTCCCATGGGATGAGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: VSLHGRMDLDGNGGL*PLPGCPHVPWDEDW Trigger: CCAGTCCTCATCCCATGGGACGTGGGGGCAGCCAGGGAGAGGGCAAAGGCCCCCGTTCCCGTCCAGGTCCATCCGTCCATGGAGGGAAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 90 bp | AAGGGAGGAGACGGACATGGTTGGTGCCCATCCCAGGTGCGGTGCTaGCTGGCAGAACTCAGGAGCAGCCCCGGGCCAGCCCACTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: KGGDGHGWCPSQVRC*LAELRSSPGPAHFP Trigger: GGGAAAGTGGGCTGGCCCGGGGCTGCTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTCCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CCA 90 bp | GAGGAGACGGACATGGTTGGTGCCCATCCCAGGTGCGGTGCTGCCTaGCAGAACTCAGGAGCAGCCCCGGGCCAGCCCACTTTCCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: EETDMVGAHPRCGAA*QNSGAAPGQPTFPR Trigger: TCTGGGGAAAGTGGGCTGGCCCGGGGCTGCTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 90 bp | GCCCTCTCCCTGGCTGCCCCCACGTCCCATGGGATGAGGACTGGGTaGCGGGATGGGCAGTCCCTGAGTCGGGAGAGTGACTATAACCCT | + |
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Preference number: 5 (lower is better) Translates to: ALSLAAPTSHGMRTG*RDGQSLSRESDYNP Trigger: AGGGTTATAGTCACTCTCCCGACTCAGGGACTGCCCATCCCGGCACCCAGTCCTCATCCCATGGGACGTGGGGGCAGCCAGGGAGAGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 90 bp | AGGAAGGGAGGAGACGGACATGGTTGGTGCCCATCCCAGGTGCGGTaGTGCCTGGCAGAACTCAGGAGCAGCCCCGGGCCAGCCCACTTT | + |
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Preference number: 5 (lower is better) Translates to: RKGGDGHGWCPSQVR*CLAELRSSPGPAHF Trigger: AAAGTGGGCTGGCCCGGGGCTGCTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTCCCTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 90 bp | GCCTTGGCCCTGGACTGCAGGAAGGGAGGAGACGGACATGGTTGGTaGCCATCCCAGGTGCGGTGCTGCCTGGCAGAACTCAGGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ALALDCRKGGDGHGW*PSQVRCCLAELRSS Trigger: GCTGCTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTCCCTTCCTGCAGTCCAGGGCCAAGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CCA 90 bp | CAAGCCTTGGCCCTGGACTGCAGGAAGGGAGGAGACGGACATGGTTaGTGCCCATCCCAGGTGCGGTGCTGCCTGGCAGAACTCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: QALALDCRKGGDGHG*CPSQVRCCLAELRS Trigger: GCTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTCCCTTCCTGCAGTCCAGGGCCAAGGCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CCA 90 bp | AAAGTCAAACGTCCAGCCCTGCGGGGCTGTCCAACCTCTGGGTCATaGTCACGGGGAGGCCACAGTGGCCGGACTGAGGCTCCTGTGGTC | + |
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Preference number: 5 (lower is better) Translates to: KVKRPALRGCPTSGS*SRGGHSGRTEAPVV Trigger: GACCACAGGAGCCTCAGTCCGGCCACTGTGGCCTCCCCGTGACCATGACCCAGAGGTTGGACAGCCCCGCAGGGCTGGACGTTTGACTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CCA 90 bp | TCTCGCCCCACAGAAGCACCTCCATCTCCACGATGTTTCCCTCCATaGACGGATGGACCTGGACGGGAACGGGGGCCTTTGCCCTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: SRPTEAPPSPRCFPP*TDGPGRERGPLPSP Trigger: GGGAGAGGGCAAAGGCCCCCGTTCCCGTCCAGGTCCATCCGTCCATGGAGGGAAACATCGTGGAGATGGAGGTGCTTCTGTGGGGCGAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS TCA 90 bp | GCCCATGCTGCCACCTGCATCCCATCAGCAGCCCAGATTCTGACCTaGGCCACGACCCAGTCCATGACCATGTCTCTCTGCCCCAACCCC | + |
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Preference number: 5 (lower is better) Translates to: AHAATCIPSAAQILT*ATTQSMTMSLCPNP Trigger: GGGGTTGGGGCAGAGAGACATGGTCATGGACTGGGTCGTGGCTCAGGTCAGAATCTGGGCTGCTGATGGGATGCAGGTGGCAGCATGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS TCA 90 bp | CTGAGGGCATATGCTCCTGTGGAAGACCTGGCAGCAAGGACCAGCTaGGTTAGAGTGAGGGCGGTGCTGGGGAGGGAAGCCCCATGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LRAYAPVEDLAARTS*VRVRAVLGREAPCG Trigger: CCCACATGGGGCTTCCCTCCCCAGCACCGCCCTCACTCTAACTCAGCTGGTCCTTGCTGCCAGGTCTTCCACAGGAGCATATGCCCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000619114.1 ENST00000619377.1 |
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| CDS GCA 90 bp | GAAGGGAACGGTGGAGGAACTGAGCCAAAGTCAAACGTCCAGCCCTaGGGGGCTGTCCAACCTCTGGGTCATGGTCACGGGGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: EGNGGGTEPKSNVQP*GAVQPLGHGHGEAT Trigger: TGTGGCCTCCCCGTGACCATGACCCAGAGGTTGGACAGCCCCGCAGGGCTGGACGTTTGACTTTGGCTCAGTTCCTCCACCGTTCCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CCA 90 bp | AACACAAGCCTTGGCCCTGGACTGCAGGAAGGGAGGAGACGGACATaGTTGGTGCCCATCCCAGGTGCGGTGCTGCCTGGCAGAACTCAG | + |
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Preference number: 5 (lower is better) Translates to: NTSLGPGLQEGRRRT*LVPIPGAVLPGRTQ Trigger: CTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTCCCTTCCTGCAGTCCAGGGCCAAGGCTTGTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 90 bp | GAGCACCTATGGATCACCGCCAACCTCTCCCACTTCCAGGGACACTaGTCCGGGCAAACTTCAGCCCAGGGAGGTGAAGGCTGTGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: EHLWITANLSHFQGH*SGQTSAQGGEGCGV Trigger: CACTCCACAGCCTTCACCTCCCTGGGCTGAAGTTTGCCCGGAGCAGTGTCCCTGGAAGTGGGAGAGGTTGGCGGTGATCCATAGGTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CCA 90 bp | CCAAGGAAAAGCACAGCCATGCAGCGGCTGTGGGTCAGCTTGAAGTaGGGCCATCCCGGGTCCATGGTTTTGCGACCCAGCAGCCTATGC | + |
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Preference number: 5 (lower is better) Translates to: PRKSTAMQRLWVSLK*GHPGSMVLRPSSLC Trigger: GCATAGGCTGCTGGGTCGCAAAACCATGGACCCGGGATGGCCCCACTTCAAGCTGACCCACAGCCGCTGCATGGCTGTGCTTTTCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000575894.1 ENST00000619674.1 ENST00000620462.4 |
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| CDS CCA 90 bp | AGGAGCCTTCGGGCCGGCTTGGGGCCACAGCAAAATCCACAGGCCTaGGAGAGGCACAGGATAAATGAAGGGAACGGTGGAGGAACTGAG | + |
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Preference number: 5 (lower is better) Translates to: RSLRAGLGPQQNPQA*ERHRINEGNGGGTE Trigger: CTCAGTTCCTCCACCGTTCCCTTCATTTATCCTGTGCCTCTCCCAGGCCTGTGGATTTTGCTGTGGCCCCAAGCCGGCCCGAAGGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CCA 90 bp | GCTGGCCCAGAGCTCAGCAGAGCTAGCGTTTGCTTCAGCCATTGGTaGTCAAGCCACGAGGCCCAAACATCCAGCCCCAACAATAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: AGPELSRASVCFSHW*SSHEAQTSSPNNRP Trigger: TGGCCTATTGTTGGGGCTGGATGTTTGGGCCTCGTGGCTTGACCACCAATGGCTGAAGCAAACGCTAGCTCTGCTGAGCTCTGGGCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619114.1 ENST00000619377.1 |
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| CDS CCA 90 bp | TGGGCTGGCCCAGAGCTCAGCAGAGCTAGCGTTTGCTTCAGCCATTaGTGGTCAAGCCACGAGGCCCAAACATCCAGCCCCAACAATAGG | + |
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Preference number: 5 (lower is better) Translates to: WAGPELSRASVCFSH*WSSHEAQTSSPNNR Trigger: CCTATTGTTGGGGCTGGATGTTTGGGCCTCGTGGCTTGACCACCAATGGCTGAAGCAAACGCTAGCTCTGCTGAGCTCTGGGCCAGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619114.1 ENST00000619377.1 |
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| CDS CCA 90 bp | GGTCATGGTCACGGGGAGGCCACAGTGGCCGGACTGAGGCTCCTGTaGTCTCGGAGTTTCCTAACTGGGTTAGGAAAAGCAGAAGCAACC | + |
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Preference number: 5 (lower is better) Translates to: GHGHGEATVAGLRLL*SRSFLTGLGKAEAT Trigger: GGTTGCTTCTGCTTTTCCTAACCCAGTTAGGAAACTCCGAGACCACAGGAGCCTCAGTCCGGCCACTGTGGCCTCCCCGTGACCATGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS TCA 90 bp | CAAGCCACGAGGCCCAAACATCCAGCCCCAACAATAGGCCATATCTaGAGTCAGGCAACACTAAACCTGCCATGCGCTGGGCACTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: QATRPKHPAPTIGHI*SQATLNLPCAGHCR Trigger: CCTACAGTGCCCAGCGCATGGCAGGTTTAGTGTTGCCTGACTTCAGATATGGCCTATTGTTGGGGCTGGATGTTTGGGCCTCGTGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619114.1 ENST00000619377.1 |
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| CDS TCA 90 bp | TTGGATTATCAATGTCTAAGAAGACAAGAACATTGCCAGGGGCTGTaGATCGAAGGGCGGAGGTGGCGGCTCTCGGGCAGAGATGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LDYQCLRRQEHCQGL*IEGRRWRLSGRDGP Trigger: GGGCCCATCTCTGCCCGAGAGCCGCCACCTCCGCCCTTCGATTCACAGCCCCTGGCAATGTTCTTGTCTTCTTAGACATTGATAATCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS GCA 90 bp | CCCATGAAGCTGGGCTTGGGAGAGAATCCACCTGAGCATATTACATaGTGGGTGGGGGCAGCACCAGGATATCATAGCAAATCCAACAAC | + |
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Preference number: 5 (lower is better) Translates to: PMKLGLGENPPEHIT*WVGAAPGYHSKSNN Trigger: GTTGTTGGATTTGCTATGATATCCTGGTGCTGCCCCCACCCAGCATGTAATATGCTCAGGTGGATTCTCTCCCAAGCCCAGCTTCATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CCA 90 bp | AGCTGGGCTTGGGAGAGAATCCACCTGAGCATATTACATGCTGGGTaGGGGCAGCACCAGGATATCATAGCAAATCCAACAACAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SWAWERIHLSILHAG*GQHQDIIANPTTES Trigger: GGACTCTGTTGTTGGATTTGCTATGATATCCTGGTGCTGCCCCCACCCAGCATGTAATATGCTCAGGTGGATTCTCTCCCAAGCCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CCA 90 bp | ATGAAGCTGGGCTTGGGAGAGAATCCACCTGAGCATATTACATGCTaGGTGGGGGCAGCACCAGGATATCATAGCAAATCCAACAACAGA | + |
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Preference number: 5 (lower is better) Translates to: MKLGLGENPPEHITC*VGAAPGYHSKSNNR Trigger: TCTGTTGTTGGATTTGCTATGATATCCTGGTGCTGCCCCCACCCAGCATGTAATATGCTCAGGTGGATTCTCTCCCAAGCCCAGCTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS GCA 90 bp | GGCCCCGTTTCATCTTATTACTTATATCGCCTCAGTTTATCTTACTaGCTCCCCTATCCATCTCCCACCAGGAGGAAGAACTTGTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: GPVSSYYLYRLSLSY*LPYPSPTRRKNLSK Trigger: CTTTGACAAGTTCTTCCTCCTGGTGGGAGATGGATAGGGGAGGCAGTAAGATAAACTGAGGCGATATAAGTAATAAGATGAAACGGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS GCA 72 bp | CGGTCCCGGCCGGCCTGTTGCCTTCCTGGGCTCAGGTaGCCCAGCGCCGCTCTCGGTTCCTCCTCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RSRPACCLPGLR*PSAALGSSSAE Trigger: CTCAGCTGAGGAGGAACCGAGAGCGGCGCTGGGGCACCTGAGCCCAGGAAGGCAACAGGCCGGCCGGGACCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000491999.5 ENST00000615744.4 ENST00000619674.1 ENST00000620462.4 |
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| CDS GCA 72 bp | TCGCCCGAAGCACCGACCTCGGACGCTGGAGGCCCCTaGGACCCAGGAACTGGCCGGCTTTCTCCCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPEAPTSDAGGP*DPGTGRLSPRW Trigger: CCAGCGGGGAGAAAGCCGGCCAGTTCCTGGGTCGCAGGGGCCTCCAGCGTCCGAGGTCGGTGCTTCGGGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615744.4 |
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| CDS CCA 72 bp | AGGACCAGCGCCCGACGCTCTCCGCGAACCGTGGCCTaGGCCTGCTGCACGTCAGGGTTCCAGCAGCAACCC | + |
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Preference number: 6 (lower is better) Translates to: RTSARRSPRTVA*ACCTSGFQQQP Trigger: GGGTTGCTGCTGGAACCCTGACGTGCAGCAGGCCCAGGCCACGGTTCGCGGAGAGCGTCGGGCGCTGGTCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS GCA 72 bp | GACGGACATGGTTGGTGCCCATCCCAGGTGCGGTGCTaGCTGGCAGAACTCAGGAGCAGCCCCGGGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: DGHGWCPSQVRC*LAELRSSPGPA Trigger: GGCTGGCCCGGGGCTGCTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 72 bp | AGCGCCCGACGCTCTCCGCGAACCGTGGCCTGGGCCTaGTGCACGTCAGGGTTCCAGCAGCAACCCAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SARRSPRTVAWA*CTSGFQQQPKV Trigger: GACCTTGGGTTGCTGCTGGAACCCTGACGTGCAGCAGGCCCAGGCCACGGTTCGCGGAGAGCGTCGGGCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CCA 72 bp | CGTCCAGCCCTGCGGGGCTGTCCAACCTCTGGGTCATaGTCACGGGGAGGCCACAGTGGCCGGACTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RPALRGCPTSGS*SRGGHSGRTEA Trigger: AGCCTCAGTCCGGCCACTGTGGCCTCCCCGTGACCATGACCCAGAGGTTGGACAGCCCCGCAGGGCTGGACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CCA 72 bp | CAACCCAAGGTCGCCCGAAGCACCGACCTCGGACGCTaGAGGCCCCTGCGACCCAGGAACTGGCCGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: QPKVARSTDLGR*RPLRPRNWPAF Trigger: GAAAGCCGGCCAGTTCCTGGGTCGCAGGGGCCTCCAGCGTCCGAGGTCGGTGCTTCGGGCGACCTTGGGTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615744.4 |
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| CDS GCA 72 bp | CTGGCTGCCCCCACGTCCCATGGGATGAGGACTGGGTaGCGGGATGGGCAGTCCCTGAGTCGGGAGAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LAAPTSHGMRTG*RDGQSLSRESD Trigger: GTCACTCTCCCGACTCAGGGACTGCCCATCCCGGCACCCAGTCCTCATCCCATGGGACGTGGGGGCAGCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CAA 90 bp | CGGCTGTGGGTCAGCTTGAAGTGGGGCCATCCCGGGTCCATGGTTTaGCGACCCAGCAGCCTATGCCGCACCCTCTGGCCCCGCTCGCTA | + |
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Preference number: 6 (lower is better) Translates to: RLWVSLKWGHPGSMV*RPSSLCRTLWPRSL Trigger: TAGCGAGCGGGGCCAGAGGGTGCGGCATAGGCTGCTGGGTCGCAAAACCATGGACCCGGGATGGCCCCACTTCAAGCTGACCCACAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000575894.1 ENST00000619674.1 ENST00000620462.4 |
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| CDS GCA 72 bp | AGGGAGGAGACGGACATGGTTGGTGCCCATCCCAGGTaGGGTGCTGCCTGGCAGAACTCAGGAGCAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: REETDMVGAHPR*GAAWQNSGAAP Trigger: CGGGGCTGCTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 72 bp | CATCCCGGGTCCATGGTTTTGCGACCCAGCAGCCTATaGCGCACCCTCTGGCCCCGCTCGCTACCTTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: HPGSMVLRPSSL*RTLWPRSLPSD Trigger: GTCCGAAGGTAGCGAGCGGGGCCAGAGGGTGCGGCATAGGCTGCTGGGTCGCAAAACCATGGACCCGGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000575894.1 ENST00000619674.1 ENST00000620462.4 |
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| CDS CCA 72 bp | CAAGCCGCTCACCCGGACTCCGAGTGCGGCAGGCGCTaGGAAGAAGGGGTTTCTGCACAAGAGTCCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: QAAHPDSECGRR*EEGVSAQESPP Trigger: GGGAGGGGACTCTTGTGCAGAAACCCCTTCTTCCCAGCGCCTGCCGCACTCGGAGTCCGGGTGAGCGGCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CCA 72 bp | AGTCAAACGTCCAGCCCTGCGGGGCTGTCCAACCTCTaGGTCATGGTCACGGGGAGGCCACAGTGGCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SQTSSPAGLSNL*VMVTGRPQWPD Trigger: GTCCGGCCACTGTGGCCTCCCCGTGACCATGACCCAGAGGTTGGACAGCCCCGCAGGGCTGGACGTTTGACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CCA 72 bp | CTCTGGGGGAAAGGGCACCGGCCCGGCGAGCACCTATaGATCACCGCCAACCTCTCCCACTTCCAGGGACAC | + |
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Preference number: 6 (lower is better) Translates to: LWGKGHRPGEHL*ITANLSHFQGH Trigger: GTGTCCCTGGAAGTGGGAGAGGTTGGCGGTGATCCATAGGTGCTCGCCGGGCCGGTGCCCTTTCCCCCAGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CCA 72 bp | ATGACCCTACCACCTCCAGGAGCCTTCGGGCCGGCTTaGGGCCACAGCAAAATCCACAGGCCTGGGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: MTLPPPGAFGPA*GHSKIHRPGRG Trigger: GCCTCTCCCAGGCCTGTGGATTTTGCTGTGGCCCCAAGCCGGCCCGAAGGCTCCTGGAGGTGGTAGGGTCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CAA 72 bp | GTCAGCTTGAAGTGGGGCCATCCCGGGTCCATGGTTTaGCGACCCAGCAGCCTATGCCGCACCCTCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: VSLKWGHPGSMV*RPSSLCRTLWP Trigger: GGGCCAGAGGGTGCGGCATAGGCTGCTGGGTCGCAAAACCATGGACCCGGGATGGCCCCACTTCAAGCTGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575894.1 ENST00000619674.1 ENST00000620462.4 |
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| CDS CCA 72 bp | AGCACAGCCATGCAGCGGCTGTGGGTCAGCTTGAAGTaGGGCCATCCCGGGTCCATGGTTTTGCGACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: STAMQRLWVSLK*GHPGSMVLRPS Trigger: GCTGGGTCGCAAAACCATGGACCCGGGATGGCCCCACTTCAAGCTGACCCACAGCCGCTGCATGGCTGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000575894.1 ENST00000619674.1 ENST00000620462.4 |
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| CDS CAA 90 bp | ACAAGCCTTGGCCCTGGACTGCAGGAAGGGAGGAGACGGACATGGTaGGTGCCCATCCCAGGTGCGGTGCTGCCTGGCAGAACTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TSLGPGLQEGRRRTW*VPIPGAVLPGRTQE Trigger: CTCCTGAGTTCTGCCAGGCAGCACCGCACCTGGGATGGGCACCAACCATGTCCGTCTCCTCCCTTCCTGCAGTCCAGGGCCAAGGCTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS TCA 72 bp | CCACTTTCCCCAGACTTGGCCAGCCTAGGCACTTCCTaGACCAGAGAGAGCAGCCACCCACAGCAGCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: PLSPDLASLGTS*TRESSHPQQPV Trigger: CACCGGCTGCTGTGGGTGGCTGCTCTCTCTGGTTCAGGAAGTGCCTAGGCTGGCCAAGTCTGGGGAAAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 72 bp | AGTACCCCTCCCCGAGGGTCTTGCAGGTGCCCATGCTaGCACCTGCATCCCATCAGCAGCCCAGATTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: STPPRGSCRCPC*HLHPISSPDSD Trigger: GTCAGAATCTGGGCTGCTGATGGGATGCAGGTGGCAGCATGGGCACCTGCAAGACCCTCGGGGAGGGGTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS GCA 72 bp | GGTGGAGGAACTGAGCCAAAGTCAAACGTCCAGCCCTaGGGGGCTGTCCAACCTCTGGGTCATGGTCACGGG | + |
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Preference number: 6 (lower is better) Translates to: GGGTEPKSNVQP*GAVQPLGHGHG Trigger: CCCGTGACCATGACCCAGAGGTTGGACAGCCCCGCAGGGCTGGACGTTTGACTTTGGCTCAGTTCCTCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS CCA 72 bp | ACCTCCATCTCCACGATGTTTCCCTCCATGGACGGATaGACCTGGACGGGAACGGGGGCCTTTGCCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TSISTMFPSMDG*TWTGTGAFALS Trigger: GGAGAGGGCAAAGGCCCCCGTTCCCGTCCAGGTCCATCCGTCCATGGAGGGAAACATCGTGGAGATGGAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CCA 72 bp | ATGGTTTTGCGACCCAGCAGCCTATGCCGCACCCTCTaGCCCCGCTCGCTACCTTCGGACACAAAGCGGACA | + |
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Preference number: 6 (lower is better) Translates to: MVLRPSSLCRTL*PRSLPSDTKRT Trigger: TGTCCGCTTTGTGTCCGAAGGTAGCGAGCGGGGCCAGAGGGTGCGGCATAGGCTGCTGGGTCGCAAAACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000575894.1 ENST00000619674.1 ENST00000620462.4 |
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| CDS TCA 72 bp | TATGCTCCTGTGGAAGACCTGGCAGCAAGGACCAGCTaGGTTAGAGTGAGGGCGGTGCTGGGGAGGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: YAPVEDLAARTS*VRVRAVLGREA Trigger: GGCTTCCCTCCCCAGCACCGCCCTCACTCTAACTCAGCTGGTCCTTGCTGCCAGGTCTTCCACAGGAGCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619114.1 ENST00000619377.1 |
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| CDS CCA 72 bp | AGAGTGCCAAGGAAAAGCACAGCCATGCAGCGGCTGTaGGTCAGCTTGAAGTGGGGCCATCCCGGGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RVPRKSTAMQRL*VSLKWGHPGSM Trigger: CATGGACCCGGGATGGCCCCACTTCAAGCTGACCCACAGCCGCTGCATGGCTGTGCTTTTCCTTGGCACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000575894.1 ENST00000619674.1 ENST00000620462.4 |
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| CDS CCA 72 bp | CGGGCCGGCTTGGGGCCACAGCAAAATCCACAGGCCTaGGAGAGGCACAGGATAAATGAAGGGAACGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: RAGLGPQQNPQA*ERHRINEGNGG Trigger: TCCACCGTTCCCTTCATTTATCCTGTGCCTCTCCCAGGCCTGTGGATTTTGCTGTGGCCCCAAGCCGGCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000615744.4 ENST00000620462.4 |
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| CDS TCA 72 bp | GCCACCTGCATCCCATCAGCAGCCCAGATTCTGACCTaGGCCACGACCCAGTCCATGACCATGTCTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ATCIPSAAQILT*ATTQSMTMSLC Trigger: GCAGAGAGACATGGTCATGGACTGGGTCGTGGCTCAGGTCAGAATCTGGGCTGCTGATGGGATGCAGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CCA 72 bp | ACAGAAGCACCTCCATCTCCACGATGTTTCCCTCCATaGACGGATGGACCTGGACGGGAACGGGGGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TEAPPSPRCFPP*TDGPGRERGPL Trigger: CAAAGGCCCCCGTTCCCGTCCAGGTCCATCCGTCCATGGAGGGAAACATCGTGGAGATGGAGGTGCTTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000575894.1 |
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| CDS CCA 72 bp | CCAGAGCTCAGCAGAGCTAGCGTTTGCTTCAGCCATTaGTGGTCAAGCCACGAGGCCCAAACATCCAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PELSRASVCFSH*WSSHEAQTSSP Trigger: GGGGCTGGATGTTTGGGCCTCGTGGCTTGACCACCAATGGCTGAAGCAAACGCTAGCTCTGCTGAGCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000619114.1 ENST00000619377.1 |
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| CDS TCA 72 bp | TCAGCCCATGAAGCTGGGCTTGGGAGAGAATCCACCTaGGCATATTACATGCTGGGTGGGGGCAGCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SAHEAGLGREST*AYYMLGGGSTR Trigger: CCTGGTGCTGCCCCCACCCAGCATGTAATATGCTCAGGTGGATTCTCTCCCAAGCCCAGCTTCATGGGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CCA 72 bp | GAGCTCAGCAGAGCTAGCGTTTGCTTCAGCCATTGGTaGTCAAGCCACGAGGCCCAAACATCCAGCCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: ELSRASVCFSHW*SSHEAQTSSPN Trigger: GTTGGGGCTGGATGTTTGGGCCTCGTGGCTTGACCACCAATGGCTGAAGCAAACGCTAGCTCTGCTGAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619114.1 ENST00000619377.1 |
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| CDS TCA 72 bp | CAATGTCTAAGAAGACAAGAACATTGCCAGGGGCTGTaGATCGAAGGGCGGAGGTGGCGGCTCTCGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: QCLRRQEHCQGL*IEGRRWRLSGR Trigger: TCTGCCCGAGAGCCGCCACCTCCGCCCTTCGATTCACAGCCCCTGGCAATGTTCTTGTCTTCTTAGACATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CAA 90 bp | CTGCCTGAGTTTCTGCACAAACCACAGGGAATAAAGTTTGTCCACTaGGAAAGCCCCCTTGCCTGCAACCCACTCCCACCTCGGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LPEFLHKPQGIKFVH*ESPLACNPLPPRKA Trigger: GGCTTTCCGAGGTGGGAGTGGGTTGCAGGCAAGGGGGCTTTCCAAGTGGACAAACTTTATTCCCTGTGGTTTGTGCAGAAACTCAGGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS TCA 72 bp | AGGCCCAAACATCCAGCCCCAACAATAGGCCATATCTaGAGTCAGGCAACACTAAACCTGCCATGCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RPKHPAPTIGHI*SQATLNLPCAG Trigger: CCCAGCGCATGGCAGGTTTAGTGTTGCCTGACTTCAGATATGGCCTATTGTTGGGGCTGGATGTTTGGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000619114.1 ENST00000619377.1 |
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| CDS CCA 72 bp | CACACCCTCCATCTGCCCTGGGGTCGGGTGATCACATaGCCCCGTTTCATCTTATTACTTATATCGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HTLHLPWGRVIT*PRFILLLISPQ Trigger: CTGAGGCGATATAAGTAATAAGATGAAACGGGGCCATGTGATCACCCGACCCCAGGGCAGATGGAGGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CAA 90 bp | GAAAGCTTGGAGGTTGGATTATCAATGTCTAAGAAGACAAGAACATaGCCAGGGGCTGTGAATCGAAGGGCGGAGGTGGCGGCTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: ESLEVGLSMSKKTRT*PGAVNRRAEVAALG Trigger: CCCGAGAGCCGCCACCTCCGCCCTTCGATTCACAGCCCCTGGCAATGTTCTTGTCTTCTTAGACATTGATAATCCAACCTCCAAGCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS GCA 72 bp | CTGGGCTTGGGAGAGAATCCACCTGAGCATATTACATaGTGGGTGGGGGCAGCACCAGGATATCATAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: LGLGENPPEHIT*WVGAAPGYHSK Trigger: TTTGCTATGATATCCTGGTGCTGCCCCCACCCAGCATGTAATATGCTCAGGTGGATTCTCTCCCAAGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS GCA 72 bp | ACAGGGAATAAAGTTTGTCCACTTGGAAAGCCCCCTTaGCTGCAACCCACTCCCACCTCGGAAAGCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TGNKVCPLGKPP*LQPTPTSESQK Trigger: TTTCTGGCTTTCCGAGGTGGGAGTGGGTTGCAGGCAAGGGGGCTTTCCAAGTGGACAAACTTTATTCCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CCA 72 bp | GGCTTGGGAGAGAATCCACCTGAGCATATTACATGCTaGGTGGGGGCAGCACCAGGATATCATAGCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: GLGENPPEHITC*VGAAPGYHSKS Trigger: GGATTTGCTATGATATCCTGGTGCTGCCCCCACCCAGCATGTAATATGCTCAGGTGGATTCTCTCCCAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CAA 72 bp | TTTCTGCACAAACCACAGGGAATAAAGTTTGTCCACTaGGAAAGCCCCCTTGCCTGCAACCCACTCCCACCT | + |
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Preference number: 6 (lower is better) Translates to: FLHKPQGIKFVH*ESPLACNPLPP Trigger: AGGTGGGAGTGGGTTGCAGGCAAGGGGGCTTTCCAAGTGGACAAACTTTATTCCCTGTGGTTTGTGCAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CCA 72 bp | TGGGAGAGAATCCACCTGAGCATATTACATGCTGGGTaGGGGCAGCACCAGGATATCATAGCAAATCCAACA | + |
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Preference number: 6 (lower is better) Translates to: WERIHLSILHAG*GQHQDIIANPT Trigger: TGTTGGATTTGCTATGATATCCTGGTGCTGCCCCCACCCAGCATGTAATATGCTCAGGTGGATTCTCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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| CDS CAA 90 bp | CTGCAACCCACTCCCACCTCGGAAAGCCAGAAACTCCAAGAAAGCTaGGAGGTTGGATTATCAATGTCTAAGAAGACAAGAACATTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LQPTPTSESQKLQES*EVGLSMSKKTRTLP Trigger: TGGCAATGTTCTTGTCTTCTTAGACATTGATAATCCAACCTCCAAGCTTTCTTGGAGTTTCTGGCTTTCCGAGGTGGGAGTGGGTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000619674.1 |
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