RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCOLN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000055732

Ensembl transcript IDs: ENST00000341115.8, ENST00000370587.5, ENST00000370589.7, ENST00000474447.1, ENST00000475312.1, ENST00000490600.6

Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGCTAAGTGTCAACCTAAACCCATTCTCCCCTTCCTAGGCACATaGCTGGGCTGTGTTCCCTGGCTCCCTCTGCAGTTAGGATTGACT +
Preference number: 1 (lower is better)
Translates to: AAKCQPKPILPFLGT*LGCVPWLPLQLGLT
Trigger: AGTCAATCCTAACTGCAGAGGGAGCCAGGGAACACAGCCCAGGCATGTGCCTAGGAAGGGGAGAATGGGTTTAGGTTGACACTTAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR CCA 90 bp GTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTCTaGTGCGCTCTTATTCTGGTGCACTCTTATTCTTCCTTTCAAGAG +
Preference number: 1 (lower is better)
Translates to: VTYGRITLLAGALLF*CALILVHSYSSFQE
Trigger: CTCTTGAAAGGAAGAATAAGAGTGCACCAGAATAAGAGCGCACCAGAATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR GCA 90 bp ACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTCTGGTaGGCTCTTATTCTGGTGCACTCTTATTCTTCCTTTCAAGAGAAG +
Preference number: 1 (lower is better)
Translates to: TYGRITLLAGALLFW*ALILVHSYSSFQEK
Trigger: CTTCTCTTGAAAGGAAGAATAAGAGTGCACCAGAATAAGAGCGCACCAGAATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR GCA 90 bp ATTTCCAGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTaGCATAGCAGATTGCTTGGTACCTTTGTTCTCATAAGCATGATT +
Preference number: 1 (lower is better)
Translates to: ISRVDVSSLVEVLTD*HSRLLGTFVLISMI
Trigger: AATCATGCTTATGAGAACAAAGGTACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCTGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR TCA 90 bp AAGTCCAGTGTTAAGTTCAGTTTATTTTCTGCTGGTGTCCCAATGTaGAAAGGTTCATCTGGCTCCACAAAGAAACACTCAGTTTCAATT +
Preference number: 1 (lower is better)
Translates to: KSSVKFSLFSAGVPM*KGSSGSTKKHSVSI
Trigger: AATTGAAACTGAGTGTTTCTTTGTGGAGCCAGATGAACCTTTTCACATTGGGACACCAGCAGAAAATAAACTGAACTTAACACTGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR TCA 90 bp AGGTCTCAATTAGCTCAAAATAACAGTCTTCAAACATACTACATCTaGTCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATA +
Preference number: 1 (lower is better)
Translates to: RSQLAQNNSLQTYYI*SQNIHSVPTQLHII
Trigger: TATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAGCTAATTGAGACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
3UTR-3UTR CCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCACTGGGCTGTGTTCCCTaGCTCCCTCTGCAGTTAGGA +
Preference number: 2 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPLGCVP*LPLQLG
Trigger: TCCTAACTGCAGAGGGAGCCAGGGAACACAGCCCAG...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR GCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCATCTTCTCTGAGCCATTaGATTTGGGGTCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPSSLSH*IWGLCP
Trigger: TGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGA...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR TCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAATGACTGTGAGATGTTaGGCTACTCACCAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPMTVRC*ATHQSV
Trigger: TACAGACTGGTGAGTAGCTCAACATCTCACAGTCAT...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR TCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACGCTGGTGTCCCAATGTaGAAAGGTTCATCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHAGVPM*KGSSGS
Trigger: GGAGCCAGATGAACCTTTTCACATTGGGACACCAGC...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR CCA 90 bp GTTCCCTGGCTCCCTCTGCAGTTAGGATTGACTAAATTCTATCCAGTGGGATATGGCAGAGAAACAAAATaGGAGGAACATGGGTGCCTG +
Preference number: 2 (lower is better)
Translates to: VPWLPLQLGLTKFYPVGYGRETK*EEHGCL
Trigger: CAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCC...ATATCCCACTGGATAGAATTTAGTCAATCCTAACTGCAGAGGGAGCCAGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCACAAGTCCTTAAGGGGTaGCAGAGAAACAAAATGGGA +
Preference number: 2 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPQVLKG*QRNKMG
Trigger: TCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR CAA 90 bp TGTATAGCTGCAAGTACAAACGCTTTCCAGCTTCAGGGCCTTCTGTaGCCACGCCTTCAGCTTGAAATATTCTCCCCAAGATTTCAAGTC +
Preference number: 2 (lower is better)
Translates to: CIAASTNAFQLQGLL*PRLQLEIFSPRFQV
Trigger: GACTTGAAATCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCAACAGAAGGCCCTGAAGCTGGAAAGCGTTTGTACTTGCAGCTATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR GCA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAGGTGACTCAATCAGTTaGATCAAGACTAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEGDSIS*IKTRET
Trigger: TGTTTCCCTAGTCTTGATGCAACTGATTGAGTCACC...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR CAA 90 bp GATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCCATAGCAGATaGCTTGGTACCTTTGTTCTCATAAGCATGATTCCCAACGGAGAC +
Preference number: 2 (lower is better)
Translates to: DVSSLVEVLTDCHSR*LGTFVLISMIPNGD
Trigger: GTCTCCGTTGGGAATCATGCTTATGAGAACAAAGGTACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGAGGAAACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR TCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACAACCAACTCCCCAGGTaGCTCAATCAGTTGCATCAA +
Preference number: 2 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHNQLPR*LNQLHQ
Trigger: TTGATGCAACTGATTGAGTCACCTGGGGAGTTGGTT...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR TCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACCAGAAAGGCATTTTCTaGCCACTCCGAGACTACTGT +
Preference number: 2 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHQKGIF*PLRDYC
Trigger: ACAGTAGTCTCGGAGTGGTCAGAAAATGCCTTTCTG...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR CCA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTGTGAAAAGGTTCATCTaGCTCCACAAAGAAACACTC +
Preference number: 2 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGVKRFI*LHKETL
Trigger: GAGTGTTTCTTTGTGGAGCCAGATGAACCTTTTCAC...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR CCA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTACTGTTAGGAGTCTGTaGAAGTCCAGTGTTAAGTTC +
Preference number: 2 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGTVRSL*KSSVKF
Trigger: GAACTTAACACTGGACTTCCACAGACTCCTAACAGT...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR TCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACGGAGCATTCTCACTTTaGATGGACGGAGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHGAFSL*MDGGNK
Trigger: TTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCC...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR GCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGGAAGTGCTGACAGATTaGCATAGCAGATTGCTTGGT +
Preference number: 2 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWEVLTD*HSRLLG
Trigger: ACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTC...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR GCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAATTGATCCAGATACATaGCAGTCTTTACATTCTCTG +
Preference number: 2 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPIDPDT*QSLHSL
Trigger: CAGAGAATGTAAAGACTGGCATGTATCTGGATCAAT...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR CAA 90 bp GAAACAAAATGGGAGGAACATGGGTGCCTGAATGACTGTGAGATGTaGAGCTACTCACCAGTCTGTAAAACCCATTCTGACTATTGCATA +
Preference number: 2 (lower is better)
Translates to: ETKWEEHGCLNDCEM*SYSPVCKTHSDYCI
Trigger: TATGCAATAGTCAGAATGGGTTTTACAGACTGGTGAGTAGCTCAACATCTCACAGTCATTCAGGCACCCATGTTCCTCCCATTTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR CAA 90 bp AAGCCAGGGTTACTGAGTTGTCCAAAGTCACAGTCAGACCAAGGATaGTTTTCCACTAATTACACAGTCTGCACAATCAGAATAGCAGGA +
Preference number: 2 (lower is better)
Translates to: KPGLLSCPKSQSDQG*FSTNYTVCTIRIAG
Trigger: TCCTGCTATTCTGATTGTGCAGACTGTGTAATTAGTGGAAAACAATCCTTGGTCTGACTGTGACTTTGGACAACTCAGTAACCCTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR-3UTR TCA 90 bp GTTCCCTGGCTCCCTCTGCAGTTAGGATTGACTAAATTCTATCCAGTGGGATATTTGTGGATCACACTTTaGAAAACTCTGCCTAAGAGA +
Preference number: 2 (lower is better)
Translates to: VPWLPLQLGLTKFYPVGYLWITL*KTLPKR
Trigger: TCTCTTAGGCAGAGTTTTTCAAAGTGTGATCCACAA...ATATCCCACTGGATAGAATTTAGTCAATCCTAACTGCAGAGGGAGCCAGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR GCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACGGTGACTCAATCAGTTaGATCAAGACTAGGGAAACA +
Preference number: 2 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHGDSIS*IKTRET
Trigger: TGTTTCCCTAGTCTTGATGCAACTGATTGAGTCACC...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR GCA 90 bp GTTCCCTGGCTCCCTCTGCAGTTAGGATTGACTAAATTCTATCCAGTGGGATATGAGACATTGTATAGCTaGAAGTACAAACGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: VPWLPLQLGLTKFYPVGYETLYS*KYKRFP
Trigger: TGGAAAGCGTTTGTACTTGCAGCTATACAATGTCTC...ATATCCCACTGGATAGAATTTAGTCAATCCTAACTGCAGAGGGAGCCAGGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR GCA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGATTGCCATAGCAGATTaGTTGGTACCTTTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMIAIAD*LVPLFS
Trigger: TGAGAACAAAGGTACCAAGCAATCTGCTATGGCAAT...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR CCA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAGGTAAAGTAAGAAAATaGGAGCATTCTCACTTTGAA +
Preference number: 2 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEGKVRK*EHSHFE
Trigger: TTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR TCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTAGCTCCTATCTTCTCTaGGCCATTGCATTTGGGGTC +
Preference number: 2 (lower is better)
Translates to: HDMIIYEAETVNGLERYFSSYLL*AIAFGV
Trigger: GACCCCAAATGCAATGGCTCAGAGAAGATAGGAGCT...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACCATTCTCACTTTGAATaGACGGAGGAAACAAATGCA +
Preference number: 2 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHHSHFE*TEETNA
Trigger: TGCATTTGTTTCCTCCGTCCATTCAAAGTGAGAATG...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR TCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACTACCTTGGTTGTGTATaGATTTTGGTGTGTGTAAGA +
Preference number: 2 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHYLGCV*ILVCVR
Trigger: TCTTACACACACCAAAATTCATACACAACCAAGGTA...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR TCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTAACCAACTCCCCAGGTaGCTCAATCAGTTGCATCAA +
Preference number: 2 (lower is better)
Translates to: HDMIIYEAETVNGLERYFNQLPR*LNQLHQ
Trigger: TTGATGCAACTGATTGAGTCACCTGGGGAGTTGGTT...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR TCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATATGACTGTGAGATGTTaGGCTACTCACCAGTCTGTA +
Preference number: 2 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNMTVRC*ATHQSV
Trigger: TACAGACTGGTGAGTAGCTCAACATCTCACAGTCAT...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CCA 90 bp ACGATGTTTTGGTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATATCACATTGTTAGCTaGTGCGCTCTTATTCTGGTG +
Preference number: 2 (lower is better)
Translates to: TMFWSMMYRIYNGGPRRLYHIVS*CALILV
Trigger: CACCAGAATAAGAGCGCACCAGCTAACAATGTGATA...TAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGACCAAAACATCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR-3UTR GCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATCACTTTGAAAAACTCTaGCTAAGAGACCTCCTGACT +
Preference number: 2 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNHFEKL*LRDLLT
Trigger: AGTCAGGAGGTCTCTTAGGCAGAGTTTTTCAAAGTG...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACGGTAAAGTAAGAAAATaGGAGCATTCTCACTTTGAA +
Preference number: 2 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHGKVRK*EHSHFE
Trigger: TTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTAATTCTTCCACTATaGGCCTTGTTGTCAAATGTT +
Preference number: 2 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWLILPL*ALLSNV
Trigger: AACATTTGACAACAAGGCCCATAGTGGAAGAATTAA...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR CAA 90 bp TACCATTGTGTTACAATTGCCTACTGTATTCAATACAGTAACATGTaGTACAGATTTGTACCCCAGGACCAACAGGCTATACCAAATAGC +
Preference number: 2 (lower is better)
Translates to: YHCVTIAYCIQYSNM*YRFVPQDQQAIPNS
Trigger: GCTATTTGGTATAGCCTGTTGGTCCTGGGGTACAAATCTGTACAACATGTTACTGTATTGAATACAGTAGGCAATTGTAACACAATGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR-3UTR TCA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATATCTCCATCCTTAAGTaGCATATGGCCGTATCACAT +
Preference number: 2 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYISILK*HMAVSH
Trigger: ATGTGATACGGCCATATGTCACTTAAGGATGGAGAT...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR-3UTR TCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTCCAAGCAAGTCAGAATaGCAAAGGCATCAAAGATCA +
Preference number: 2 (lower is better)
Translates to: HDMIIYEAETVNGLERYFPSKSE*QRHQRS
Trigger: TGATCTTTGATGCCTTTGTCATTCTGACTTGCTTGG...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR CCA 72 bp CTCCCCTTCCTAGGCACATGCCTGGGCTGTGTTCCCTaGCTCCCTCTGCAGTTAGGATTGACTAAATTCTAT +
Preference number: 3 (lower is better)
Translates to: LPFLGTCLGCVP*LPLQLGLTKFY
Trigger: ATAGAATTTAGTCAATCCTAACTGCAGAGGGAGCCAGGGAACACAGCCCAGGCATGTGCCTAGGAAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR TCA 72 bp ATGATAACTACACCCACTCTCTCAAGGATGGACTCCTaGGAGTGGTCCAAGCCAGGGTTACTGAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: MITTPTLSRMDS*EWSKPGLLSCP
Trigger: TGGACAACTCAGTAACCCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR-3UTR CAA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGATCTTCTCTGAGCCATaGCATTTGGGGTCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMIFSEP*HLGSLP
Trigger: GGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGAT...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CAA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACTTCCCAACGGAGACATaGTATAGCTGCAAGTACAAA +
Preference number: 3 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDFPTET*YSCKYK
Trigger: TTTGTACTTGCAGCTATACAATGTCTCCGTTGGGAA...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR CAA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACGAGTGTTCTTCTGAATaGATCCAGATACATGCCAGT +
Preference number: 3 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDECSSE*IQIHAS
Trigger: ACTGGCATGTATCTGGATCAATTCAGAAGAACACTC...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR GCA 72 bp CAAGTACAAACGCTTTCCAGCTTCAGGGCCTTCTGTTaGCACGCCTTCAGCTTGAAATATTCTCCCCAAGAT +
Preference number: 3 (lower is better)
Translates to: QVQTLSSFRAFC*HAFSLKYSPQD
Trigger: ATCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCAACAGAAGGCCCTGAAGCTGGAAAGCGTTTGTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR CCA 72 bp GGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTCTaGTGCGCTCTTATTCTGGTGCACTCTTATTCTTCC +
Preference number: 3 (lower is better)
Translates to: GRITLLAGALLF*CALILVHSYSS
Trigger: GGAAGAATAAGAGTGCACCAGAATAAGAGCGCACCAGAATAAGAGCGCACCAGCTAACAATGTGATACGGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR-3UTR CAA 90 bp GGTATCATTTCCAGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCTGCCACGCCTTCAGCTaGAAATATTCTCCCCAAGAT +
Preference number: 3 (lower is better)
Translates to: GIISRVDVSSLVEVLTDCCHAFS*KYSPQD
Trigger: ATCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCA...GCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCTGGAAATGATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR TCA 72 bp CCAGCTTCAGGGCCTTCTGTTGCCACGCCTTCAGCTTaGAATATTCTCCCCAAGATTTCAAGTCTTCAGAAA +
Preference number: 3 (lower is better)
Translates to: PASGPSVATPSA*NILPKISSLQK
Trigger: TTTCTGAAGACTTGAAATCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCAACAGAAGGCCCTGAAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR CAA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACGGGAGCATTCTCACTTaGAATGGACGGAGGAAACAA +
Preference number: 3 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHGSILT*NGRRKQ
Trigger: TTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCC...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CAA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCCTTACCTTAGTTACCTaGGTTGTGTATGAATTTTGG +
Preference number: 3 (lower is better)
Translates to: APIFSEPLHLGSLPRFITLTLVT*VVYEFW
Trigger: CCAAAATTCATACACAACCAAGGTAACTAAGGTAAG...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CAA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATATCTTCTCTGAGCCATaGCATTTGGGGTCTCTGCCC +
Preference number: 3 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNIFSEP*HLGSLP
Trigger: GGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGAT...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR TCA 72 bp CGAACTGTCTGCAGATTAATGGCTTTCAGTTTAAACTaGAGCTCCACTGTTAGGAGTCTGTGGAAGTCCAGT +
Preference number: 3 (lower is better)
Translates to: RTVCRLMAFSLN*SSTVRSLWKSS
Trigger: ACTGGACTTCCACAGACTCCTAACAGTGGAGCTTCAGTTTAAACTGAAAGCCATTAATCTGCAGACAGTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR CAA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATGCACACCATAGTGCCTaGACCTCACTTTCCCCTATA +
Preference number: 3 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNAHHSA*TSLSPI
Trigger: TATAGGGGAAAGTGAGGTCAAGGCACTATGGTGTGC...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CAA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGCTTCCACTATGGGCCTaGTTGTCAAATGTTATAGTC +
Preference number: 3 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWLPLWA*LSNVIV
Trigger: GACTATAACATTTGACAACAAGGCCCATAGTGGAAG...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR GCA 72 bp GTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTaGCATAGCAGATTGCTTGGTACCTTTGTTCTCATA +
Preference number: 3 (lower is better)
Translates to: VDVSSLVEVLTD*HSRLLGTFVLI
Trigger: TATGAGAACAAAGGTACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR-3UTR CAA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGCTTACCTTAGTTACCTaGGTTGTGTATGAATTTTGG +
Preference number: 3 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMLTLVT*VVYEFW
Trigger: CCAAAATTCATACACAACCAAGGTAACTAAGGTAAG...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CAA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTCAGTCAGACCAAGGATaGTTTTCCACTAATTACACA +
Preference number: 3 (lower is better)
Translates to: PSLSDIWPYHIVSWCALIQSDQG*FSTNYT
Trigger: TGTGTAATTAGTGGAAAACAATCCTTGGTCTGACTG...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR GCA 72 bp TCAGACCAAGGATTGTTTTCCACTAATTACACAGTCTaGACAATCAGAATAGCAGGAGCAACAGTATCAGAG +
Preference number: 3 (lower is better)
Translates to: SDQGLFSTNYTV*TIRIAGATVSE
Trigger: CTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACTGTGTAATTAGTGGAAAACAATCCTTGGTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR-3UTR CAA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTGGGAGCATTCTCACTTaGAATGGACGGAGGAAACAA +
Preference number: 3 (lower is better)
Translates to: HDMIIYEAETVNGLERYFGSILT*NGRRKQ
Trigger: TTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCC...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CAA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATAATGACTGTGAGATGTaGAGCTACTCACCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNNDCEM*SYSPVC
Trigger: ACAGACTGGTGAGTAGCTCAACATCTCACAGTCATT...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR-3UTR CAA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTGATTGCCATAGCAGATaGCTTGGTACCTTTGTTCTC +
Preference number: 3 (lower is better)
Translates to: HDMIIYEAETVNGLERYFDCHSR*LGTFVL
Trigger: GAGAACAAAGGTACCAAGCAATCTGCTATGGCAATC...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR TCA 72 bp GTTAAGTTCAGTTTATTTTCTGCTGGTGTCCCAATGTaGAAAGGTTCATCTGGCTCCACAAAGAAACACTCA +
Preference number: 3 (lower is better)
Translates to: VKFSLFSAGVPM*KGSSGSTKKHS
Trigger: TGAGTGTTTCTTTGTGGAGCCAGATGAACCTTTTCACATTGGGACACCAGCAGAAAATAAACTGAACTTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR TCA 72 bp AGGCTATACCATCTAGGTTTGTGGAAGTACATGCTATaGTGTTTAATGACAAAATCGCCTAATGACACATTT +
Preference number: 3 (lower is better)
Translates to: RLYHLGLWKYML*CLMTKSPNDTF
Trigger: AAATGTGTCATTAGGCGATTTTGTCATTAAACATCATAGCATGTACTTCCACAAACCTAGATGGTATAGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAGCAGCCAGCCACCCTTaGCATTCACCCGGAGCGCCG +
Preference number: 4 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEAASHP*HSPGAP
Trigger: CGGCGCTCCGGGTGAATGTCAAGGGTGGCTGGCTGC...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR GCA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACCCCTTCCTAGGCACATaGCTGGGCTGTGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDPFLGT*LGCVPW
Trigger: CCAGGGAACACAGCCCAGGCATGTGCCTAGGAAGGG...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCAGCGCGGGAGGCAGGGTaGGCGAAGGACCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSAREAG*AKDPIR
Trigger: CCTGATGGGGTCCTTCGCCCACCCTGCCTCCCGCGC...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR CCA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACCTGGGCTGTGTTCCCTaGCTCCCTCTGCAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDLGCVP*LPLQLG
Trigger: TCCTAACTGCAGAGGGAGCCAGGGAACACAGCCCAG...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCACCCTTCCTAGGCACATaGCTGGGCTGTGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPPFLGT*LGCVPW
Trigger: CCAGGGAACACAGCCCAGGCATGTGCCTAGGAAGGG...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGGACATTGGGCAGCGCTaGCTGAAGGGTCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQARDIGQR*LKGQNE
Trigger: CTCATTTTGACCCTTCAGGCAGCGCTGCCCAATGTC...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATAGGATCTGCCATCTCTaGGGGACAGCGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHRICHL*GTAGSG
Trigger: GCCGCTCCCCGCTGTCCCCCAGAGATGGCAGATCCT...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGCCACTCTCTCAAGGATaGACTCCTGAGAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQARPLSQG*TPESGP
Trigger: TGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGG...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp GGTATCATTTCCAGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCTTGATTGGAGTAAGCTaGGGGACAGCGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: GIISRVDVSSLVEVLTDCLIGVS*GTAGSG
Trigger: GCCGCTCCCCGCTGTCCCCCAGCTTACTCCAATCAA...GCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCTGGAAATGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTGGGCAGAGGCTTGATTaGAGTAAGCTGGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGGQRLD*SKLGDS
Trigger: GCTGTCCCCCAGCTTACTCCAATCAAGCCTCTGCCC...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACCGATTTTCCTCTTCATaGGAGCTGCAGCTACTCACA +
Preference number: 4 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDRFSSS*ELQLLT
Trigger: TGTGAGTAGCTGCAGCTCTCATGAAGAGGAAAATCG...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTGATTGGAGTAAGCTaGGGGACAGCGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWLIGVS*GTAGSG
Trigger: GCCGCTCCCCGCTGTCCCCCAGCTTACTCCAATCAA...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGGCAGAGGCTTGATTaGAGTAAGCTGGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMGQRLD*SKLGDS
Trigger: GCTGTCCCCCAGCTTACTCCAATCAAGCCTCTGCCC...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGCCTGAAGGGTCAAAATaGGGAGGTTGTACTTTGCAA +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQARPEGSK*GGCTLQ
Trigger: TTGCAAAGTACAACCTCCTCATTTTGACCCTTCAGG...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATTTGGGCAGCGCTGCCTaGAGGGTCAAAATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHLGSAA*RVKMRR
Trigger: CCTCCTCATTTTGACCCTTCAGGCAGCGCTGCCCAA...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGGAAGTGCTGACAGATTaGCATAGCAGATTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQAREVLTD*HSRLLG
Trigger: ACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTC...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTAACTACCTCAGGATCTaGCATCTCTGTTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGNYLRI*HLCSWR
Trigger: CCGCCAGGAACAGAGATGGCAGATCCTGAGGTAGTT...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACCTGGGCTGTGTTCCCTaGCTCCCTCTGCAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHLGCVP*LPLQLG
Trigger: TCCTAACTGCAGAGGGAGCCAGGGAACACAGCCCAG...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACAGTGTTCTTCTGAATTaGTCCAGATACATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDSVLLN*SRYMPV
Trigger: GACTGGCATGTATCTGGATCAATTCAGAAGAACACT...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGCCAAGCAAGTCAGAATaGCAAAGGCATCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQARPSKSE*QRHQRS
Trigger: TGATCTTTGATGCCTTTGTCATTCTGACTTGCTTGG...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACAGGTTTACCCAGTCTaGAAAGCCCTTCCGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSQVYPV*KALPRV
Trigger: CACCCTCGGAAGGGCTTTTCAGACTGGGTAAACCTG...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR TCA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTAGCTCCTATCTTCTCTaGGCCATTGCATTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGSSYLL*AIAFGV
Trigger: GACCCCAAATGCAATGGCTCAGAGAAGATAGGAGCT...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGATCTCCATCCTTAAGTaGCATATGGCCGTATCACAT +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQARISILK*HMAVSH
Trigger: ATGTGATACGGCCATATGTCACTTAAGGATGGAGAT...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCCAGAAAGGCATTTTCTaGCCACTCCGAGACTACTGT +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITQKGIF*PLRDYC
Trigger: ACAGTAGTCTCGGAGTGGTCAGAAAATGCCTTTCTG...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR GCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATAACTACCTCAGGATCTaGCATCTCTGGGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHNYLRI*HLWGTA
Trigger: CGCTGTCCCCCAGAGATGGCAGATCCTGAGGTAGTT...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACCACTTTGAAAAACTCTaGCTAAGAGACCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDHFEKL*LRDLLT
Trigger: AGTCAGGAGGTCTCTTAGGCAGAGTTTTTCAAAGTG...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAAGGATCTGCCATCTCTaGGGGACAGCGGGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLRICHL*GTAGSG
Trigger: GCCGCTCCCCGCTGTCCCCCAGAGATGGCAGATCCT...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGAGTTTTCGCCTCATCTaGTCTTCTAATAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQARSFRLI*SSNRSS
Trigger: GGAGCTTCTATTAGAAGACCAGATGAGGCGAAAACT...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGACTGTTAGGAGTCTGTaGAAGTCCAGTGTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQARTVRSL*KSSVKF
Trigger: GAACTTAACACTGGACTTCCACAGACTCCTAACAGT...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR CAA 72 bp TGGGAGGAACATGGGTGCCTGAATGACTGTGAGATGTaGAGCTACTCACCAGTCTGTAAAACCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: WEEHGCLNDCEM*SYSPVCKTHSD
Trigger: GTCAGAATGGGTTTTACAGACTGGTGAGTAGCTCAACATCTCACAGTCATTCAGGCACCCATGTTCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp CAGCTTCAGGGCCTTCTGTTGCCACGCCTTCAGCTTGAAATATTCTCCCCAAGAGCTTTCAGTTTAAACTaGAGCTCCACTGTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: QLQGLLLPRLQLEIFSPRAFSLN*SSTVRS
Trigger: ACTCCTAACAGTGGAGCTTCAGTTTAAACTGAAAGC...TCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCAACAGAAGGCCCTGAAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR TCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATGGGAACCCCAGCAGCTaGAGGAGGTATTCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNGNPSS*RRYSQP
Trigger: TGGCTGCGAATACCTCCTTCAGCTGCTGGGGTTCCC...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR TCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCGGAGCATTCTCACTTTaGATGGACGGAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITGAFSL*MDGGNK
Trigger: TTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCC...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp AGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCCATAGCAGATTGAGCTCCTATCTTCTCTaGGCCATTGCATTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RVDVSSLVEVLTDCHSRLSSYLL*AIAFGV
Trigger: GACCCCAAATGCAATGGCTCAGAGAAGATAGGAGCT...CAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR TCA 90 bp ACGATGTTTTGGTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATCAAGGATGGACTCCTaGGAGTGGTCCAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TMFWSMMYRIYNGGPRRLSRMDS*EWSKPG
Trigger: CCCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGA...TAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGACCAAAACATCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTGCCACGCCTTCAGCTTaGAATATTCTCCCCAAGATT +
Preference number: 4 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGATPSA*NILPKI
Trigger: AATCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGC...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR GCA 90 bp GGTATCATTTCCAGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCTGGGAGGAACATGGGTaGCTGAATGACTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: GIISRVDVSSLVEVLTDCWEEHG*LNDCEM
Trigger: CATCTCACAGTCATTCAGGCACCCATGTTCCTCCCA...GCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCTGGAAATGATACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCATATGGCAAGTTTCCATaGTTTTCTACCTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPYGKFP*FSTSSP
Trigger: TGGGCTCGAGGTAGAAAACCATGGAAACTTGCCATA...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCTATGGCAAGTTTCCATaGTTTTCTACCTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITYGKFP*FSTSSP
Trigger: TGGGCTCGAGGTAGAAAACCATGGAAACTTGCCATA...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCGGATCTGCCATCTCTTaGAAAAGTCAGGTTTACCCA +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITGSAIS*KSQVYP
Trigger: TGGGTAAACCTGACTTTTCCAAGAGATGGCAGATCC...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR CCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCCAAGTCCTTAAGGGGTaGCAGAGAAACAAAATGGGA +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITQVLKG*QRNKMG
Trigger: TCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAGCTTTCAGTTTAAACTaGAGCTCCACTGTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEAFSLN*SSTVRS
Trigger: ACTCCTAACAGTGGAGCTTCAGTTTAAACTGAAAGC...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAGTGTTCTTCTGAATTaGTCCAGATACATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITSVLLN*SRYMPV
Trigger: GACTGGCATGTATCTGGATCAATTCAGAAGAACACT...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GATAACTACACCCACTCTCTCAAGGATGGACTCCTGAGAGTGGTCCAAGCCAGGCAAACATACTACATCTaGTCTCAGAATATCCACAGT +
Preference number: 4 (lower is better)
Translates to: DNYTHSLKDGLLRVVQARQTYYI*SQNIHS
Trigger: ACTGTGGATATTCTGAGATCAGATGTAGTATGTTTG...CCTGGCTTGGACCACTCTCAGGAGTCCATCCTTGAGAGAGTGGGTGTAGTTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGAACCAACTCCCCAGGTaGCTCAATCAGTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMNQLPR*LNQLHQ
Trigger: TTGATGCAACTGATTGAGTCACCTGGGGAGTTGGTT...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp AGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCCATAGCAGATTGAACCAACTCCCCAGGTaGCTCAATCAGTTGCATCAA +
Preference number: 4 (lower is better)
Translates to: RVDVSSLVEVLTDCHSRLNQLPR*LNQLHQ
Trigger: TTGATGCAACTGATTGAGTCACCTGGGGAGTTGGTT...CAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR GCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCGGTGACTCAATCAGTTaGATCAAGACTAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITGDSIS*IKTRET
Trigger: TGTTTCCCTAGTCTTGATGCAACTGATTGAGTCACC...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTGGGAGGAACATGGGTaGCTGAATGACTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWWEEHG*LNDCEM
Trigger: CATCTCACAGTCATTCAGGCACCCATGTTCCTCCCA...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATCACATTGTTAGCTGGTaGGCTCTTATTCTGGTGCGC +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHHIVSW*ALILVR
Trigger: GCGCACCAGAATAAGAGCGCACCAGCTAACAATGTG...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp CAGCTTCAGGGCCTTCTGTTGCCACGCCTTCAGCTTGAAATATTCTCCCCAAGAGAGACATTGTATAGCTaGAAGTACAAACGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: QLQGLLLPRLQLEIFSPRETLYS*KYKRFP
Trigger: TGGAAAGCGTTTGTACTTGCAGCTATACAATGTCTC...TCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCAACAGAAGGCCCTGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAAGTTTTCGCCTCATCTaGTCTTCTAATAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPSFRLI*SSNRSS
Trigger: GGAGCTTCTATTAGAAGACCAGATGAGGCGAAAACT...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAGTGAAAAGGTTCATCTaGCTCCACAAAGAAACACTC +
Preference number: 4 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEVKRFI*LHKETL
Trigger: GAGTGTTTCTTTGTGGAGCCAGATGAACCTTTTCAC...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACTATAGCTGCAAGTACTaGTTTACTGCGAAGATTAAC +
Preference number: 4 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDYSCKY*FTAKIN
Trigger: GTTAATCTTCGCAGTAAACCAGTACTTGCAGCTATA...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR CCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGGGCAGAGAAACAAAATaGGAGGAACATGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWGRETK*EEHGCL
Trigger: CAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCC...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCAGGCAGAGAAACAAAATaGGAGGAACATGGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSGRETK*EEHGCL
Trigger: CAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCC...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACCACTTATCATTACCCTaGTTTACTGCGAAGATTAAC +
Preference number: 4 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDHLSLP*FTAKIN
Trigger: GTTAATCTTCGCAGTAAACCAGGGTAATGATAAGTG...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
3UTR CAA 72 bp GGAGGAAACAAATGCAAGCATGCACACCATAGTGCCTaGACCTCACTTTCCCCTATAGCCCCACTCATTTTT +
Preference number: 4 (lower is better)
Translates to: GGNKCKHAHHSA*TSLSPIAPLIF
Trigger: AAAAATGAGTGGGGCTATAGGGGAAAGTGAGGTCAAGGCACTATGGTGTGCATGCTTGCATTTGTTTCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR CAA 72 bp TCCAGCTTCAGGGCCTTCTGTTGCCACGCCTTCAGCTaGAAATATTCTCCCCAAGATTTCAAGTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SSFRAFCCHAFS*KYSPQDFKSSE
Trigger: TTCTGAAGACTTGAAATCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCAACAGAAGGCCCTGAAGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR TCA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACGATTTTCCTCTTCATaGGAGCTGCAGCTACTCACA +
Preference number: 4 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSRFSSS*ELQLLT
Trigger: TGTGAGTAGCTGCAGCTCTCATGAAGAGGAAAATCG...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCACTGCGAAGATTAACTaGTCATACACGTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITTAKIN*SYTSLC
Trigger: ACAAAGTGACGTGTATGATCAGTTAATCTTCGCAGT...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCATTGTGGATCACACTTTaGAAAACTCTGCCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPLWITL*KTLPKR
Trigger: TCTCTTAGGCAGAGTTTTTCAAAGTGTGATCCACAA...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACCCTCTTCATGAGAGCTaGAGCTACTCACAACTACCT +
Preference number: 4 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHPLHES*SYSQLP
Trigger: AGGTAGTTGTGAGTAGCTGCAGCTCTCATGAAGAGG...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCATTGCCATAGCAGATTaGTTGGTACCTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITIAIAD*LVPLFS
Trigger: TGAGAACAAAGGTACCAAGCAATCTGCTATGGCAAT...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTAAGCCCTTCCGAGGGTaGACTTTTAAAAACTGCAAA +
Preference number: 4 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGKPFRG*TFKNCK
Trigger: TTTGCAGTTTTTAAAAGTGCACCCTCGGAAGGGCTT...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR CCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAAAGCTACCACCATCTaGTTACTTAGCCCAAATAAG +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITKATTI*LLSPNK
Trigger: CTTATTTGGGCTAAGTAACCAGATGGTGGTAGCTTT...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCACATTCTCACTTTGAATaGACGGAGGAAACAAATGCA +
Preference number: 4 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPHSHFE*TEETNA
Trigger: TGCATTTGTTTCCTCCGTCCATTCAAAGTGAGAATG...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACGGTAAAGTAAGAAAATaGGAGCATTCTCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDGKVRK*EHSHFE
Trigger: TTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGTTGGGCAGCGCTGCCTaGAGGGTCAAAATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVLGSAA*RVKMRR
Trigger: CCTCCTCATTTTGACCCTTCAGGCAGCGCTGCCCAA...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCATACCTTGGTTGTGTATaGATTTTGGTGTGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPYLGCV*ILVCVR
Trigger: TCTTACACACACCAAAATTCATACACAACCAAGGTA...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACATGACTGTGAGATGTTaGGCTACTCACCAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHMTVRC*ATHQSV
Trigger: TACAGACTGGTGAGTAGCTCAACATCTCACAGTCAT...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCGAAGAAAACATGATATaGTCATCTATGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITEENMI*SSMRQR
Trigger: TCTCTGCCTCATAGATGATCATATCATGTTTTCTTC...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAAACTACCTCAGGATCTaGCATCTCTGGGGGACAGCG +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLNYLRI*HLWGTA
Trigger: CGCTGTCCCCCAGAGATGGCAGATCCTGAGGTAGTT...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCAGAAGTGCTGACAGATTaGCATAGCAGATTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSEVLTD*HSRLLG
Trigger: ACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTC...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACGAAGTGCTGACAGATTaGCATAGCAGATTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHEVLTD*HSRLLG
Trigger: ACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTC...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAATTGATCCAGATACATaGCAGTCTTTACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEIDPDT*QSLHSL
Trigger: CAGAGAATGTAAAGACTGGCATGTATCTGGATCAAT...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GTTCCCTGGCTCCCTCTGCAGTTAGGATTGACTAAATTCTATCCAGTGGGATATGGTGACTCAATCAGTTaGATCAAGACTAGGGAAACA +
Preference number: 4 (lower is better)
Translates to: VPWLPLQLGLTKFYPVGYGDSIS*IKTRET
Trigger: TGTTTCCCTAGTCTTGATGCAACTGATTGAGTCACC...ATATCCCACTGGATAGAATTTAGTCAATCCTAACTGCAGAGGGAGCCAGGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp TACCTTTGTTCTCATAAGCATGATTCCCAACGGAGACATTGTATAGCTGCAAGTTCTTCTCTGAGCCATTaGATTTGGGGTCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: YLCSHKHDSQRRHCIAASSSLSH*IWGLCP
Trigger: TGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGA...ACTTGCAGCTATACAATGTCTCCGTTGGGAATCATGCTTATGAGAACAAAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp AGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCCATAGCAGATTGAGTTTTCGCCTCATCTaGTCTTCTAATAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVDVSSLVEVLTDCHSRLSFRLI*SSNRSS
Trigger: GGAGCTTCTATTAGAAGACCAGATGAGGCGAAAACT...CAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp GGTATCATTTCCAGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCGTGAAAAGGTTCATCTaGCTCCACAAAGAAACACTC +
Preference number: 4 (lower is better)
Translates to: GIISRVDVSSLVEVLTDCVKRFI*LHKETL
Trigger: GAGTGTTTCTTTGTGGAGCCAGATGAACCTTTTCAC...GCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCTGGAAATGATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTCAGTTTATTTTCTGCTaGTGTCCCAATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGQFIFC*CPNVKR
Trigger: CCTTTTCACATTGGGACACCAGCAGAAAATAAACTG...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR CAA 72 bp TCGCTTGTAGAAGTGCTGACAGATTGCCATAGCAGATaGCTTGGTACCTTTGTTCTCATAAGCATGATTCCC +
Preference number: 4 (lower is better)
Translates to: SLVEVLTDCHSR*LGTFVLISMIP
Trigger: GGGAATCATGCTTATGAGAACAAAGGTACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR TCA 90 bp ACGATGTTTTGGTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTACGATTTTCCTCTTCATaGGAGCTGCAGCTACTCACA +
Preference number: 4 (lower is better)
Translates to: TMFWSMMYRIYNGGPRRLRFSSS*ELQLLT
Trigger: TGTGAGTAGCTGCAGCTCTCATGAAGAGGAAAATCG...TAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGACCAAAACATCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATGCTTTCAGTTTAAACTaGAGCTCCACTGTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHAFSLN*SSTVRS
Trigger: ACTCCTAACAGTGGAGCTTCAGTTTAAACTGAAAGC...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGCCAAGCAAGTCAGAATaGCAAAGGCATCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWPSKSE*QRHQRS
Trigger: TGATCTTTGATGCCTTTGTCATTCTGACTTGCTTGG...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGGAGACATTGTATAGCTaGAAGTACTGGTTTACTGCG +
Preference number: 4 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWETLYS*KYWFTA
Trigger: CGCAGTAAACCAGTACTTGCAGCTATACAATGTCTC...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR GCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGCACTTTGAAAAACTCTaGCTAAGAGACCTCCTGACT +
Preference number: 4 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWHFEKL*LRDLLT
Trigger: AGTCAGGAGGTCTCTTAGGCAGAGTTTTTCAAAGTG...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATGTGAAAAGGTTCATCTaGCTCCACAAAGAAACACTC +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHVKRFI*LHKETL
Trigger: GAGTGTTTCTTTGTGGAGCCAGATGAACCTTTTCAC...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACACTGTTAGGAGTCTGTaGAAGTCCAGTGTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHTVRSL*KSSVKF
Trigger: GAACTTAACACTGGACTTCCACAGACTCCTAACAGT...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCTTAATTCTTCCACTATaGGCCTTGTTGTCAAATGTT +
Preference number: 4 (lower is better)
Translates to: APIFSEPLHLGSLPRFITLILPL*ALLSNV
Trigger: AACATTTGACAACAAGGCCCATAGTGGAAGAATTAA...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GGTATCATTTCCAGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCAAAGCTACCACCATCTaGTTACTTAGCCCAAATAAG +
Preference number: 4 (lower is better)
Translates to: GIISRVDVSSLVEVLTDCKATTI*LLSPNK
Trigger: CTTATTTGGGCTAAGTAACCAGATGGTGGTAGCTTT...GCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCTGGAAATGATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGCAGAGACGGTGAATaGTCTAGAAAGATATTTTGT +
Preference number: 4 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMGRDGE*SRKIFC
Trigger: ACAAAATATCTTTCTAGACCATTCACCGTCTCTGCC...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGCTGGTGTCCCAATGTaGAAAGGTTCATCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVAGVPM*KGSSGS
Trigger: GGAGCCAGATGAACCTTTTCACATTGGGACACCAGC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTACTGCGAAGATTAACTaGTCATACACGTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: PSLSDIWPYHIVSWCALITAKIN*SYTSLC
Trigger: ACAAAGTGACGTGTATGATCAGTTAATCTTCGCAGT...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATCCAAGCCAGGGTTACTaGGTTGTCCAAAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYPSQGY*VVQSHS
Trigger: ACTGTGACTTTGGACAACTCAGTAACCCTGGCTTGG...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTCAGATGGAGATGTTTaGTGGTTAAAATTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWSDGDV*WLKLQR
Trigger: TCGCTGCAATTTTAACCAGCAAACATCTCCATCTGA...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGATTGATCCAGATACATaGCAGTCTTTACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMIDPDT*QSLHSL
Trigger: CAGAGAATGTAAAGACTGGCATGTATCTGGATCAAT...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp ACGATGTTTTGGTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTAGAGGAGGTTGTACTTTaGAAAGAAACCGAGGTATCG +
Preference number: 4 (lower is better)
Translates to: TMFWSMMYRIYNGGPRRLEEVVL*KETEVS
Trigger: CGATACCTCGGTTTCTTTGCAAAGTACAACCTCCTC...TAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGACCAAAACATCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGACATTGGGCAGCGCTaGCTGAAGGGTCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVDIGQR*LKGQNE
Trigger: CTCATTTTGACCCTTCAGGCAGCGCTGCCCAATGTC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp AGTAGGTCTAACATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGACTTTGTGTGTACACTaGATATGTGTCATCCATTCG +
Preference number: 4 (lower is better)
Translates to: SRSNMVHFTRHPMILMQWTLCVH*ICVIHS
Trigger: CGAATGGATGACACATATGCAGTGTACACACAAAGT...CCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATGTTAGACCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTTCTTCTCTGAGCCATTaGATTTGGGGTCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFSSLSH*IWGLCP
Trigger: TGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGA...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GGTATCATTTCCAGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCCTCAGTTTCAATTTCTaGATCGATGTCAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: GIISRVDVSSLVEVLTDCLSFNF*IDVKGI
Trigger: GATACCTTTGACATCGATCCAGAAATTGAAACTGAG...GCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCTGGAAATGATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CCA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACAGTTTATTTTCTGCTaGTGTCCCAATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSQFIFC*CPNVKR
Trigger: CCTTTTCACATTGGGACACCAGCAGAAAATAAACTG...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATCCAAATAAGACCAGCTaGATAGTCACCATTGCAATT +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHPNKTS*IVTIAI
Trigger: AATTGCAATGGTGACTATCCAGCTGGTCTTATTTGG...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACCCAAATAAGACCAGCTaGATAGTCACCATTGCAATT +
Preference number: 4 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHPNKTS*IVTIAI
Trigger: AATTGCAATGGTGACTATCCAGCTGGTCTTATTTGG...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
3UTR CAA 72 bp CCTACTGTATTCAATACAGTAACATGTTGTACAGATTaGTACCCCAGGACCAACAGGCTATACCAAATAGCC +
Preference number: 4 (lower is better)
Translates to: PTVFNTVTCCTD*YPRTNRLYQIA
Trigger: GGCTATTTGGTATAGCCTGTTGGTCCTGGGGTACAAATCTGTACAACATGTTACTGTATTGAATACAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTACGATTTTCCTCTTCATaGGAGCTGCAGCTACTCACA +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLRFSSS*ELQLLT
Trigger: TGTGAGTAGCTGCAGCTCTCATGAAGAGGAAAATCG...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATGGAGCATTCTCACTTTaGATGGACGGAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNGAFSL*MDGGNK
Trigger: TTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCC...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTACCTCTTCATGAGAGCTaGAGCTACTCACAACTACCT +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLPLHES*SYSQLP
Trigger: AGGTAGTTGTGAGTAGCTGCAGCTCTCATGAAGAGG...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCAGATGGAGATGTTTGCTaGTTAAAATTGCAGCGATTT +
Preference number: 4 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSDGDVC*LKLQRF
Trigger: AAATCGCTGCAATTTTAACCAGCAAACATCTCCATC...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATTGTATTTTCCAGAGTTaGGTAGATCTTTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHCIFQS*VDLCIL
Trigger: CAGAATGCAAAGATCTACCCAACTCTGGAAAATACA...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATCCGCATATACAATGGTaGTCCCAGAAGATTATAAAA +
Preference number: 4 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHPHIQW*SQKIIK
Trigger: TTTTATAATCTTCTGGGACCACCATTGTATATGCGG...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTACCTGAAGGGTCAAAATaGGGAGGTTGTACTTTGCAA +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLPEGSK*GGCTLQ
Trigger: TTGCAAAGTACAACCTCCTCATTTTGACCCTTCAGG...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTATGACTGTGAGATGTTaGGCTACTCACCAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFMTVRC*ATHQSV
Trigger: TACAGACTGGTGAGTAGCTCAACATCTCACAGTCAT...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCCTCTTCATGAGAGCTaGAGCTACTCACAACTACCT +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVPLHES*SYSQLP
Trigger: AGGTAGTTGTGAGTAGCTGCAGCTCTCATGAAGAGG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp ACGATGTTTTGGTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATCAGATGGAGATGTTTaGTGGTTAAAATTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: TMFWSMMYRIYNGGPRRLSDGDV*WLKLQR
Trigger: TCGCTGCAATTTTAACCAGCAAACATCTCCATCTGA...TAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGACCAAAACATCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAGAGGAGGTTGTACTTTaGAAAGAAACCGAGGTATCG +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLEEVVL*KETEVS
Trigger: CGATACCTCGGTTTCTTTGCAAAGTACAACCTCCTC...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTTTTTTGCTGCATTTTTaGAAACGTGGCAAACATATC +
Preference number: 4 (lower is better)
Translates to: PSLSDIWPYHIVSWCALIFLLHF*KRGKHI
Trigger: GATATGTTTGCCACGTTTGCAAAAATGCAGCAAAAA...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATAACTACCTCAGGATCTaGCATCTCTTGGAAAAGTCA +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNNYLRI*HLLEKS
Trigger: TGACTTTTCCAAGAGATGGCAGATCCTGAGGTAGTT...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR GCA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTCCATTGTGTTACAATTaGCTACTGTATTCAATACAG +
Preference number: 4 (lower is better)
Translates to: PSLSDIWPYHIVSWCALIPLCYN*LLYSIQ
Trigger: CTGTATTGAATACAGTAGGCAATTGTAACACAATGG...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATACGAAGTTCAGTCTCTaGGAAGCCATCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYTKFSL*EAILLV
Trigger: TACCAACAAGATGGCTTCCCAGAGACTGAACTTCGT...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTCAAGTCCTTAAGGGGTaGCAGAGAAACAAAATGGGA +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFQVLKG*QRNKMG
Trigger: TCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp ACGATGTTTTGGTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTAGTACCGCATATACAATaGTGGTCCCAGAAGATTATA +
Preference number: 4 (lower is better)
Translates to: TMFWSMMYRIYNGGPRRLVPHIQ*WSQKII
Trigger: TATAATCTTCTGGGACCACCATTGTATATGCGGTAC...TAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGACCAAAACATCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR CAA 72 bp TTACTGAGTTGTCCAAAGTCACAGTCAGACCAAGGATaGTTTTCCACTAATTACACAGTCTGCACAATCAGA +
Preference number: 4 (lower is better)
Translates to: LLSCPKSQSDQG*FSTNYTVCTIR
Trigger: TCTGATTGTGCAGACTGTGTAATTAGTGGAAAACAATCCTTGGTCTGACTGTGACTTTGGACAACTCAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAGCTTTCAGTTTAAACTaGAGCTCCACTGTTAGGAGT +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLAFSLN*SSTVRS
Trigger: ACTCCTAACAGTGGAGCTTCAGTTTAAACTGAAAGC...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAAGTGTTCTTCTGAATTaGTCCAGATACATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLSVLLN*SRYMPV
Trigger: GACTGGCATGTATCTGGATCAATTCAGAAGAACACT...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATAGTGTTCTTCTGAATTaGTCCAGATACATGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYSVLLN*SRYMPV
Trigger: GACTGGCATGTATCTGGATCAATTCAGAAGAACACT...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATACTGCGAAGATTAACTaGTCATACACGTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNTAKIN*SYTSLC
Trigger: ACAAAGTGACGTGTATGATCAGTTAATCTTCGCAGT...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATTCAGATGGAGATGTTTaGTGGTTAAAATTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNSDGDV*WLKLQR
Trigger: TCGCTGCAATTTTAACCAGCAAACATCTCCATCTGA...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATATTGCCATAGCAGATTaGTTGGTACCTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNIAIAD*LVPLFS
Trigger: TGAGAACAAAGGTACCAAGCAATCTGCTATGGCAAT...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGAAGTGCTGACAGATTaGCATAGCAGATTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVEVLTD*HSRLLG
Trigger: ACCAAGCAATCTGCTATGGCAATCTGTCAGCACTTC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATACTTTGTGTGTACACTaGATATGTGTCATCCATTCG +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNTLCVH*ICVIHS
Trigger: CGAATGGATGACACATATGCAGTGTACACACAAAGT...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAGAGACATTGTATAGCTaGAAGTACTGGTTTACTGCG +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLETLYS*KYWFTA
Trigger: CGCAGTAAACCAGTACTTGCAGCTATACAATGTCTC...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp ACGATGTTTTGGTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTAGATGGAGATGTTTGCTaGTTAAAATTGCAGCGATTT +
Preference number: 4 (lower is better)
Translates to: TMFWSMMYRIYNGGPRRLDGDVC*LKLQRF
Trigger: AAATCGCTGCAATTTTAACCAGCAAACATCTCCATC...TAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGACCAAAACATCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAAGTTTTCGCCTCATCTaGTCTTCTAATAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLSFRLI*SSNRSS
Trigger: GGAGCTTCTATTAGAAGACCAGATGAGGCGAAAACT...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGTATGGCAAGTTTCCATaGTTTTCTACCTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVYGKFP*FSTSSP
Trigger: TGGGCTCGAGGTAGAAAACCATGGAAACTTGCCATA...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGACGAAGTTCAGTCTCTaGGAAGCCATCTTGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVTKFSL*EAILLV
Trigger: TACCAACAAGATGGCTTCCCAGAGACTGAACTTCGT...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATGGCAGAGACGGTGAATaGTCTAGAAAGATATTTTGT +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNGRDGE*SRKIFC
Trigger: ACAAAATATCTTTCTAGACCATTCACCGTCTCTGCC...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATTATCACATTGTTAGCTaGTGCGCTCTTATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYYHIVS*CALILV
Trigger: CACCAGAATAAGAGCGCACCAGCTAACAATGTGATA...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
3UTR CAA 72 bp GTTACAATTGCCTACTGTATTCAATACAGTAACATGTaGTACAGATTTGTACCCCAGGACCAACAGGCTATA +
Preference number: 4 (lower is better)
Translates to: VTIAYCIQYSNM*YRFVPQDQQAI
Trigger: TATAGCCTGTTGGTCCTGGGGTACAAATCTGTACAACATGTTACTGTATTGAATACAGTAGGCAATTGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCCAAGCAAGTCAGAATaGCAAAGGCATCAAAGATCA +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVPSKSE*QRHQRS
Trigger: TGATCTTTGATGCCTTTGTCATTCTGACTTGCTTGG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTTTGTGGATCACACTTTaGAAAACTCTGCCTAAGAGA +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFLWITL*KTLPKR
Trigger: TCTCTTAGGCAGAGTTTTTCAAAGTGTGATCCACAA...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTATCAGATGGAGATGTTTaGTGGTTAAAATTGCAGCGA +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLSDGDV*WLKLQR
Trigger: TCGCTGCAATTTTAACCAGCAAACATCTCCATCTGA...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGAGACATTGTATAGCTaGAAGTACTGGATAGTCACC +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVETLYS*KYWIVT
Trigger: GGTGACTATCCAGTACTTGCAGCTATACAATGTCTC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341115.8
CDS-3UTR GCA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATATTGCCATAGCAGATTaGTTGGTACCTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYIAIAD*LVPLFS
Trigger: TGAGAACAAAGGTACCAAGCAATCTGCTATGGCAAT...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR GCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAACTTTGTGTGTACACTaGATATGTGTCATCCATTCG +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLTLCVH*ICVIHS
Trigger: CGAATGGATGACACATATGCAGTGTACACACAAAGT...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATCTCAGTTTCAATTTCTaGATCGATGTCAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNLSFNF*IDVKGI
Trigger: GATACCTTTGACATCGATCCAGAAATTGAAACTGAG...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGTGAAAAGGTTCATCTaGCTCCACAAAGAAACACTC +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVVKRFI*LHKETL
Trigger: GAGTGTTTCTTTGTGGAGCCAGATGAACCTTTTCAC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTACAGTTTATTTTCTGCTaGTGTCCCAATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLQFIFC*CPNVKR
Trigger: CCTTTTCACATTGGGACACCAGCAGAAAATAAACTG...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGACTGTTAGGAGTCTGTaGAAGTCCAGTGTTAAGTTC +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVTVRSL*KSSVKF
Trigger: GAACTTAACACTGGACTTCCACAGACTCCTAACAGT...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTCCAAATAAGACCAGCTaGATAGTCACCATTGCAATT +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFPNKTS*IVTIAI
Trigger: AATTGCAATGGTGACTATCCAGCTGGTCTTATTTGG...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAAAAGCTACCACCATCTaGTTACTTAGCCCAAATAAG +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLKATTI*LLSPNK
Trigger: CTTATTTGGGCTAAGTAACCAGATGGTGGTAGCTTT...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTCATTCTCACTTTGAATaGACGGAGGAAACAAATGCA +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFHSHFE*TEETNA
Trigger: TGCATTTGTTTCCTCCGTCCATTCAAAGTGAGAATG...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAAAAGAGGCTGATGAATaGGTAGAGGTAAATTCTACT +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLKEADE*VEVNST
Trigger: AGTAGAATTTACCTCTACTCATTCATCAGCCTCTTT...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATAAAGAGGCTGATGAATaGGTAGAGGTAAATTCTACT +
Preference number: 4 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYKEADE*VEVNST
Trigger: AGTAGAATTTACCTCTACTCATTCATCAGCCTCTTT...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR TCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTACAAACATACTACATCTaGTCTCAGAATATCCACAGT +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLQTYYI*SQNIHS
Trigger: ACTGTGGATATTCTGAGATCAGATGTAGTATGTTTG...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR TCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTTACCTTGGTTGTGTATaGATTTTGGTGTGTGTAAGA +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFYLGCV*ILVCVR
Trigger: TCTTACACACACCAAAATTCATACACAACCAAGGTA...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR TCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTGAAGAAAACATGATATaGTCATCTATGAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFEENMI*SSMRQR
Trigger: TCTCTGCCTCATAGATGATCATATCATGTTTTCTTC...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGATTGCCATAGCAGATTaGTTGGTACCTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVIAIAD*LVPLFS
Trigger: TGAGAACAAAGGTACCAAGCAATCTGCTATGGCAAT...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAATTGATCCAGATACATaGCAGTCTTTACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLIDPDT*QSLHSL
Trigger: CAGAGAATGTAAAGACTGGCATGTATCTGGATCAAT...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTACTCAGTTTCAATTTCTaGATCGATGTCAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLLSFNF*IDVKGI
Trigger: GATACCTTTGACATCGATCCAGAAATTGAAACTGAG...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCAGTTTATTTTCTGCTaGTGTCCCAATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVQFIFC*CPNVKR
Trigger: CCTTTTCACATTGGGACACCAGCAGAAAATAAACTG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAGCATTTTTGCAAACGTaGCAAACATATCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLAFLQT*QTYHLH
Trigger: ATGGAGATGATATGTTTGCCACGTTTGCAAAAATGC...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTATGTATTTTCCAGAGTTaGGTAGATCTTTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLCIFQS*VDLCIL
Trigger: CAGAATGCAAAGATCTACCCAACTCTGGAAAATACA...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGATTGATCCAGATACATaGCAGTCTTTACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVIDPDT*QSLHSL
Trigger: CAGAGAATGTAAAGACTGGCATGTATCTGGATCAAT...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR GCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGACTAATTACACAGTCTaGACAATCAGAATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVTNYTV*TIRIAG
Trigger: TCCTGCTATTCTGATTGTGCAGACTGTGTAATTAGT...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGATGGAGATGTTTGCTaGTTAAAATTGCAGCGATTT +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVDGDVC*LKLQRF
Trigger: AAATCGCTGCAATTTTAACCAGCAAACATCTCCATC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGTATAGCTGCAAGTACTaGATAGTCACCATTGCAATT +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVYSCKY*IVTIAI
Trigger: AATTGCAATGGTGACTATCCAGTACTTGCAGCTATA...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341115.8
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCTCAGTTTCAATTTCTaGATCGATGTCAAAGGTATC +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVLSFNF*IDVKGI
Trigger: GATACCTTTGACATCGATCCAGAAATTGAAACTGAG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGCATTTTTGCAAACGTaGCAAACATATCATCTCCAT +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVAFLQT*QTYHLH
Trigger: ATGGAGATGATATGTTTGCCACGTTTGCAAAAATGC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGTATAGCTGCAAGTACTaGTTTACTGCGAAGATTAAC +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVYSCKY*FTAKIN
Trigger: GTTAATCTTCGCAGTAAACCAGTACTTGCAGCTATA...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CCA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTGGTAAAGTAAGAAAATaGGAGCATTCTCACTTTGAA +
Preference number: 4 (lower is better)
Translates to: HDMIIYEAETVNGLERYFGKVRK*EHSHFE
Trigger: TTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR GCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGTTTTTGCTGCATTTTTaGAAACGTGGCAAACATATC +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVFLLHF*KRGKHI
Trigger: GATATGTTTGCCACGTTTGCAAAAATGCAGCAAAAA...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CCA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGTTAATTCTTCCACTATaGGCCTTGTTGTCAAATGTT +
Preference number: 4 (lower is better)
Translates to: LKITVFKHTTSDLRISTVLILPL*ALLSNV
Trigger: AACATTTGACAACAAGGCCCATAGTGGAAGAATTAA...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS TCA 90 bp CGGGAACCCCAGCAGCTGAAGGAGGTATTCGCAGCCAGCCACCCTTaGCATTCACCCGGAGCGCCGGCGCGGGAGGCAGGGTGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: REPQQLKEVFAASHP*HSPGAPAREAGWAK
Trigger: CTTCGCCCACCCTGCCTCCCGCGCCGGCGCTCCGGGTGAATGTCAAGGGTGGCTGGCTGCGAATACCTCCTTCAGCTGCTGGGGTTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR CAA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACCGCAGCCAGCCACCCTaGACATTCACCCGGAGCGCC +
Preference number: 5 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDRSQPP*TFTRSA
Trigger: GGCGCTCCGGGTGAATGTCAAGGGTGGCTGGCTGCG...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR CAA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACCTGGCGGGCAGAGGCTaGATTGGAGTAAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDLAGRG*IGVSWG
Trigger: CCCCCAGCTTACTCCAATCAAGCCTCTGCCCGCCAG...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCCTGGCGGGCAGAGGCTaGATTGGAGTAAGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: APIFSEPLHLGSLPRFITLAGRG*IGVSWG
Trigger: CCCCCAGCTTACTCCAATCAAGCCTCTGCCCGCCAG...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACATCTTCTCTGAGCCATaGCATTTGGGGTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDIFSEP*HLGSLP
Trigger: GGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGAT...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACAGGATCTGCCATCTCTaGGAAAAGTCAGGTTTACCC +
Preference number: 5 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDRICHL*EKSGLP
Trigger: GGGTAAACCTGACTTTTCCAAGAGATGGCAGATCCT...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR CAA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAATCTTCTCTGAGCCATaGCATTTGGGGTCTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPIFSEP*HLGSLP
Trigger: GGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGAT...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAGCACACCATAGTGCCTaGACCTCACTTTCCCCTATA +
Preference number: 5 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEAHHSA*TSLSPI
Trigger: TATAGGGGAAAGTGAGGTCAAGGCACTATGGTGTGC...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS GCA 90 bp AATCATAGCTGCACAGCAGCAGAACCTGATGACATTGGGCAGCGCTaGCTGAAGGGTCAAAATGAGGAGGTTGTACTTTGCAAAGAAACC +
Preference number: 5 (lower is better)
Translates to: NHSCTAAEPDDIGQR*LKGQNEEVVLCKET
Trigger: GGTTTCTTTGCAAAGTACAACCTCCTCATTTTGACCCTTCAGGCAGCGCTGCCCAATGTCATCAGGTTCTGCTGCTGTGCAGCTATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341115.8
ENST00000370589.7
ENST00000474447.1
CDS-3UTR CAA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTGCACACCATAGTGCCTaGACCTCACTTTCCCCTATA +
Preference number: 5 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGAHHSA*TSLSPI
Trigger: TATAGGGGAAAGTGAGGTCAAGGCACTATGGTGTGC...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAGGGAGCATTCTCACTTaGAATGGACGGAGGAAACAA +
Preference number: 5 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEGSILT*NGRRKQ
Trigger: TTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCC...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS CCA 90 bp TGGGGAGATTTGAGAACCACAAACAGAAGTGATATGATCAGATGTTaGCTGCTGTGGTTGACAGCAGGTTGTTGGAGGAGTGAGGATGCT +
Preference number: 5 (lower is better)
Translates to: WGDLRTTNRSDMIRC*LLWLTAGCWRSEDA
Trigger: AGCATCCTCACTCCTCCAACAACCTGCTGTCAACCACAGCAGCCAACATCTGATCATATCACTTCTGTTTGTGGTTCTCAAATCTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474447.1
CDS-3UTR CAA 90 bp GTTCCCTGGCTCCCTCTGCAGTTAGGATTGACTAAATTCTATCCAGTGGGATATACAGTCAGGGAGTTCTaGATGACGAACTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VPWLPLQLGLTKFYPVGYTVREF*MTNCLQ
Trigger: CTGCAGACAGTTCGTCATCAAGAACTCCCTGACTGT...ATATCCCACTGGATAGAATTTAGTCAATCCTAACTGCAGAGGGAGCCAGGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGACAGTCAGGGAGTTCTaGATGACGAACTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMTVREF*MTNCLQ
Trigger: CTGCAGACAGTTCGTCATCAAGAACTCCCTGACTGT...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp GCTCCTATCTTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAATGACTGTGAGATGTaGAGCTACTCACCAGTCTGT +
Preference number: 5 (lower is better)
Translates to: APIFSEPLHLGSLPRFITNDCEM*SYSPVC
Trigger: ACAGACTGGTGAGTAGCTCAACATCTCACAGTCATT...GGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAAGATAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTTGCCACGCCTTCAGCTaGAAATATTCTCCCCAAGAT +
Preference number: 5 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGCHAFS*KYSPQD
Trigger: ATCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCA...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS GCA 90 bp ATGTATTATAAAGGGTTTGGTGACAGGGAGTCAACAGTCACATCTTaGTTCAAGAATAACCACTTCAGGACACCAGGGGCCAAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: MYYKGFGDRESTVTS*FKNNHFRTPGAKQD
Trigger: GTCCTGCTTGGCCCCTGGTGTCCTGAAGTGGTTATTCTTGAAGCAAGATGTGACTGTTGACTCCCTGTCACCAAACCCTTTATAATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS GCA 90 bp TACCTCCAGATACCTTCTTCATGTGAGCAAGAACTGGTACAACTGTaGTTTCTCCCAAATTCCGGCAGGACCTCAGTTAGGGGTAGATTT +
Preference number: 5 (lower is better)
Translates to: YLQIPSSCEQELVQL*FLPNSGRTSVRGRF
Trigger: AAATCTACCCCTAACTGAGGTCCTGCCGGAATTTGGGAGAAAGCACAGTTGTACCAGTTCTTGCTCACATGAAGAAGGTATCTGGAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS-3UTR CAA 90 bp GCAATAATCATGCAGTCAGGGCAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGTTCCCAACGGAGACATaGTATAGCTGCAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: AIIMQSGQVLKGWQRNKMFPTET*YSCKYW
Trigger: CCAGTACTTGCAGCTATACAATGTCTCCGTTGGGAA...CATTTTGTTTCTCTGCCACCCCTTAAGGACTTGCCCTGACTGCATGATTATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS-3UTR CAA 90 bp TTCTCTGAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCACTTCCACTATGGGCCTaGTTGTCAAATGTTATAGTC +
Preference number: 5 (lower is better)
Translates to: FSEPLHLGSLPRFITNSPLPLWA*LSNVIV
Trigger: GACTATAACATTTGACAACAAGGCCCATAGTGGAAG...TGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTCAGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACCTTACCTTAGTTACCTaGGTTGTGTATGAATTTTGG +
Preference number: 5 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDLTLVT*VVYEFW
Trigger: CCAAAATTCATACACAACCAAGGTAACTAAGGTAAG...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp GGTATCATTTCCAGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCGGGAGCATTCTCACTTaGAATGGACGGAGGAAACAA +
Preference number: 5 (lower is better)
Translates to: GIISRVDVSSLVEVLTDCGSILT*NGRRKQ
Trigger: TTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCC...GCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCTGGAAATGATACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CAA 90 bp GAGCCATTGCATTTGGGGTCTCTGCCCAGGTTTATAACCAACTCCCCAGGTGACGGTAAAAATAAAGATTaGCTGCAAATCTCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: EPLHLGSLPRFITNSPGDGKNKD*LQISPL
Trigger: AAGGGGAGAGATTTGCAGCAAATCTTTATTTTTACC...GTCACCTGGGGAGTTGGTTATAAACCTGGGCAGAGACCCCAAATGCAATGGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS CCA 90 bp TCTGTTCTAAGTACCTCCAGATACCTTCTTCATGTGAGCAAGAACTaGTACAACTGTGCTTTCTCCCAAATTCCGGCAGGACCTCAGTTA +
Preference number: 5 (lower is better)
Translates to: SVLSTSRYLLHVSKN*YNCAFSQIPAGPQL
Trigger: TAACTGAGGTCCTGCCGGAATTTGGGAGAAAGCACAGTTGTACCAGTTCTTGCTCACATGAAGAAGGTATCTGGAGGTACTTAGAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS-3UTR CAA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATTTCCCAACGGAGACATaGTATAGCTGCAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHFPTET*YSCKYW
Trigger: CCAGTACTTGCAGCTATACAATGTCTCCGTTGGGAA...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTCCACTATGGGCCTTGTaGTCAAATGTTATAGTCAGA +
Preference number: 5 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGPLWAL*SNVIVR
Trigger: TCTGACTATAACATTTGACAACAAGGCCCATAGTGG...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp TTTGGTGTGTGTAAGAATTCACAGGCCCCGCCGAAGAGTCTGAATTCAGTAGGTGAGTGTTCTTCTGAATaGATCCAGATACATGCCAGT +
Preference number: 5 (lower is better)
Translates to: FGVCKNSQAPPKSLNSVGECSSE*IQIHAS
Trigger: ACTGGCATGTATCTGGATCAATTCAGAAGAACACTC...ACCTACTGAATTCAGACTCTTCGGCGGGGCCTGTGAATTCTTACACACACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp CAGCTTCAGGGCCTTCTGTTGCCACGCCTTCAGCTTGAAATATTCTCCCCAAGACTTACCTTAGTTACCTaGGTTGTGTATGAATTTTGG +
Preference number: 5 (lower is better)
Translates to: QLQGLLLPRLQLEIFSPRLTLVT*VVYEFW
Trigger: CCAAAATTCATACACAACCAAGGTAACTAAGGTAAG...TCTTGGGGAGAATATTTCAAGCTGAAGGCGTGGCAACAGAAGGCCCTGAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS CCA 90 bp TTGAGAACCACAAACAGAAGTGATATGATCAGATGTTGGCTGCTGTaGTTGACAGCAGGTTGTTGGAGGAGTGAGGATGCTATTGCAATA +
Preference number: 5 (lower is better)
Translates to: LRTTNRSDMIRCWLL*LTAGCWRSEDAIAI
Trigger: TATTGCAATAGCATCCTCACTCCTCCAACAACCTGCTGTCAACCACAGCAGCCAACATCTGATCATATCACTTCTGTTTGTGGTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474447.1
CDS-3UTR CAA 90 bp GTTCCCTGGCTCCCTCTGCAGTTAGGATTGACTAAATTCTATCCAGTGGGATATATAGTATTCTCTTCCTaGAAAGCTACCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: VPWLPLQLGLTKFYPVGYIVFSS*KATTIW
Trigger: CCAGATGGTGGTAGCTTTCAAGGAAGAGAATACTAT...ATATCCCACTGGATAGAATTTAGTCAATCCTAACTGCAGAGGGAGCCAGGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp CAAGTCCTTAAGGGGTGGCAGAGAAACAAAATGGGAGGAACATGGGTGCCTGAAGGTAAAAATAAAGATTaGCTGCAAATCTCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: QVLKGWQRNKMGGTWVPEGKNKD*LQISPL
Trigger: AAGGGGAGAGATTTGCAGCAAATCTTTATTTTTACC...TTCAGGCACCCATGTTCCTCCCATTTTGTTTCTCTGCCACCCCTTAAGGACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp ACGATGTTTTGGTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTAGCCAGGGTTACTGAGTaGTCCAAAGTCACAGTCAGA +
Preference number: 5 (lower is better)
Translates to: TMFWSMMYRIYNGGPRRLARVTE*SKVTVR
Trigger: TCTGACTGTGACTTTGGACAACTCAGTAACCCTGGC...TAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGACCAAAACATCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp AGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCCATAGCAGATTGGTTTGCTGGTTAAAATaGCAGCGATTTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: RVDVSSLVEVLTDCHSRLVCWLK*QRFSSS
Trigger: TGAAGAGGAAAATCGCTGCAATTTTAACCAGCAAAC...CAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CAA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACCACTATGGGCCTTGTaGTCAAATGTTATAGTCAGA +
Preference number: 5 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSPLWAL*SNVIVR
Trigger: TCTGACTATAACATTTGACAACAAGGCCCATAGTGG...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTCTCTGGGAAGCCATCTaGTTGGTATTGCTTAATTGT +
Preference number: 5 (lower is better)
Translates to: PSLSDIWPYHIVSWCALILWEAI*LVLLNC
Trigger: ACAATTAAGCAATACCAACAAGATGGCTTCCCAGAG...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACATAGTATTCTCTTCCTaGAAAGCTACCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHIVFSS*KATTIW
Trigger: CCAGATGGTGGTAGCTTTCAAGGAAGAGAATACTAT...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp AGGGTAGATGTTTCCTCGCTTGTAGAAGTGCTGACAGATTGCCATAGCAGATTGATCATACACGTCACTTaGTGTGTACACTGCATATGT +
Preference number: 5 (lower is better)
Translates to: RVDVSSLVEVLTDCHSRLIIHVT*CVHCIC
Trigger: ACATATGCAGTGTACACACAAAGTGACGTGTATGAT...CAATCTGCTATGGCAATCTGTCAGCACTTCTACAAGCGAGGAAACATCTACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CAA 90 bp CATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCATTCCCAACGGAGACATaGTATAGCTGCAAGTACAAA +
Preference number: 5 (lower is better)
Translates to: HGTLYQAPNDSDAMVCGSFPTET*YSCKYK
Trigger: TTTGTACTTGCAGCTATACAATGTCTCCGTTGGGAA...TGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS TCA 90 bp TTTACTGTAACTCAATTGGGGAGATTTGAGAACCACAAACAGAAGTaGTATGATCAGATGTTGGCTGCTGTGGTTGACAGCAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: FTVTQLGRFENHKQK*YDQMLAAVVDSRLL
Trigger: CAACAACCTGCTGTCAACCACAGCAGCCAACATCTGATCATATCACTTCTGTTTGTGGTTCTCAAATCTCCCCAATTGAGTTACAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474447.1
CDS-3UTR CAA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTGTTTGCTGGTTAAAATaGCAGCGATTTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PSLSDIWPYHIVSWCALIVCWLK*QRFSSS
Trigger: TGAAGAGGAAAATCGCTGCAATTTTAACCAGCAAAC...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp TACCTTTGTTCTCATAAGCATGATTCCCAACGGAGACATTGTATAGCTGCAAGTGATTGCCATAGCAGATaGCTTGGTACCTTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: YLCSHKHDSQRRHCIAASDCHSR*LGTFVL
Trigger: GAGAACAAAGGTACCAAGCAATCTGCTATGGCAATC...ACTTGCAGCTATACAATGTCTCCGTTGGGAATCATGCTTATGAGAACAAAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CAA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATACAGTCAGGGAGTTCTaGATGACGAACTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYTVREF*MTNCLQ
Trigger: CTGCAGACAGTTCGTCATCAAGAACTCCCTGACTGT...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp AGTCTGCACAATCAGAATAGCAGGAGCAACAGTATCAGAGCAAAAGAGAGGCATCTGTATTTTCCAGAGTaGGGTAGATCTTTGCATTCT +
Preference number: 5 (lower is better)
Translates to: SLHNQNSRSNSIRAKERHLYFPE*GRSLHS
Trigger: AGAATGCAAAGATCTACCCAACTCTGGAAAATACAG...ATGCCTCTCTTTTGCTCTGATACTGTTGCTCCTGCTATTCTGATTGTGCAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACATCATACACGTCACTTaGTGTGTACACTGCATATGT +
Preference number: 5 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHIIHVT*CVHCIC
Trigger: ACATATGCAGTGTACACACAAAGTGACGTGTATGAT...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTATCATACACGTCACTTaGTGTGTACACTGCATATGT +
Preference number: 5 (lower is better)
Translates to: PSLSDIWPYHIVSWCALIIIHVT*CVHCIC
Trigger: ACATATGCAGTGTACACACAAAGTGACGTGTATGAT...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTCAATACAGTAACATGTaGTACAGATTTGTACCCCAG +
Preference number: 5 (lower is better)
Translates to: PSLSDIWPYHIVSWCALIQYSNM*YRFVPQ
Trigger: CTGGGGTACAAATCTGTACAACATGTTACTGTATTG...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTATTCCCAACGGAGACATaGTATAGCTGCAAGTACTGG +
Preference number: 5 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLFPTET*YSCKYW
Trigger: CCAGTACTTGCAGCTATACAATGTCTCCGTTGGGAA...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp GGTAAAGTAAGAAAATGGGAGCATTCTCACTTTGAATGGACGGAGGAAACAAATGATTGCCATAGCAGATaGCTTGGTACCTTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: GKVRKWEHSHFEWTEETNDCHSR*LGTFVL
Trigger: GAGAACAAAGGTACCAAGCAATCTGCTATGGCAATC...ATTTGTTTCCTCCGTCCATTCAAAGTGAGAATGCTCCCATTTTCTTACTTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGACAGTCAGGGAGTTCTaGATGACGAACTGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVTVREF*MTNCLQ
Trigger: CTGCAGACAGTTCGTCATCAAGAACTCCCTGACTGT...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp TACCTTTGTTCTCATAAGCATGATTCCCAACGGAGACATTGTATAGCTGCAAGTCTTCCACTATGGGCCTaGTTGTCAAATGTTATAGTC +
Preference number: 5 (lower is better)
Translates to: YLCSHKHDSQRRHCIAASLPLWA*LSNVIV
Trigger: GACTATAACATTTGACAACAAGGCCCATAGTGGAAG...ACTTGCAGCTATACAATGTCTCCGTTGGGAATCATGCTTATGAGAACAAAGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS-3UTR CAA 90 bp CCATCCTTAAGTGACATATGGCCGTATCACATTGTTAGCTGGTGCGCTCTTATTGCCATCTTGTTGGTATaGCTTAATTGTTTCGTATGT +
Preference number: 5 (lower is better)
Translates to: PSLSDIWPYHIVSWCALIAILLV*LNCFVC
Trigger: ACATACGAAACAATTAAGCAATACCAACAAGATGGC...AATAAGAGCGCACCAGCTAACAATGTGATACGGCCATATGTCACTTAAGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp ATGGTACACTTTACCAGGCACCCAATGATTCTGATGCAATGGTTTGTGGATCACCCGAGACTACTGTTATaGCCTTATGCTAGTTTATTT +
Preference number: 5 (lower is better)
Translates to: MVHFTRHPMILMQWFVDHPRLLL*PYASLF
Trigger: AAATAAACTAGCATAAGGCAATAACAGTAGTCTCGG...GTGATCCACAAACCATTGCATCAGAATCATTGGGTGCCTGGTAAAGTGTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS TCA 90 bp GTTGCTAATTCTGTTCAACCATGGGAAGTTCTCTTCATTTCTCTGTaGAATGAGAACGATGAACTAGATCTTCTACAGAGACCCTGTAGT +
Preference number: 5 (lower is better)
Translates to: VANSVQPWEVLFISL*NENDELDLLQRPCS
Trigger: ACTACAGGGTCTCTGTAGAAGATCTAGTTCATCGTTCTCATTTCACAGAGAAATGAAGAGAACTTCCCATGGTTGAACAGAATTAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGTATGGCCGTATCACATaGTTAGCTGGTGCGCTCTTA +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVYGRIT*LAGALL
Trigger: TAAGAGCGCACCAGCTAACAATGTGATACGGCCATA...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCTCAGATGGAGATGTTaGCTGGTTAAAATTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVLRWRC*LVKIAA
Trigger: CGCTGCAATTTTAACCAGCAAACATCTCCATCTGAG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGATTGCCATAGCAGATaGCTTGGTACCTTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVDCHSR*LGTFVL
Trigger: GAGAACAAAGGTACCAAGCAATCTGCTATGGCAATC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTACCACTATGGGCCTTGTaGTCAAATGTTATAGTCAGA +
Preference number: 5 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLPLWAL*SNVIVR
Trigger: TCTGACTATAACATTTGACAACAAGGCCCATAGTGG...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAGAGTGTTCTTCTGAATaGATCCAGATACATGCCAGT +
Preference number: 5 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLECSSE*IQIHAS
Trigger: ACTGGCATGTATCTGGATCAATTCAGAAGAACACTC...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTGAGTGTTCTTCTGAATaGATCCAGATACATGCCAGT +
Preference number: 5 (lower is better)
Translates to: HDMIIYEAETVNGLERYFECSSE*IQIHAS
Trigger: ACTGGCATGTATCTGGATCAATTCAGAAGAACACTC...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTAGTCAAAATGAGGAGGTaGTACTTTGCAAAGAAACCG +
Preference number: 5 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLVKMRR*YFAKKP
Trigger: CGGTTTCTTTGCAAAGTACAACCTCCTCATTTTGAC...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATGTCAAAATGAGGAGGTaGTACTTTGCAAAGAAACCG +
Preference number: 5 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYVKMRR*YFAKKP
Trigger: CGGTTTCTTTGCAAAGTACAACCTCCTCATTTTGAC...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp CATGATATGATCATCTATGAGGCAGAGACGGTGAATGGTCTAGAAAGATATTTTGTTTGCTGGTTAAAATaGCAGCGATTTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: HDMIIYEAETVNGLERYFVCWLK*QRFSSS
Trigger: TGAAGAGGAAAATCGCTGCAATTTTAACCAGCAAAC...AAAATATCTTTCTAGACCATTCACCGTCTCTGCCTCATAGATGATCATATCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000490600.6
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCCACTATGGGCCTTGTaGTCAAATGTTATAGTCAGA +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVPLWAL*SNVIVR
Trigger: TCTGACTATAACATTTGACAACAAGGCCCATAGTGG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCTTCCACTATGGGCCTaGTTGTCAAATGTTATAGTC +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVLPLWA*LSNVIV
Trigger: GACTATAACATTTGACAACAAGGCCCATAGTGGAAG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGAGTGTTCTTCTGAATaGATCCAGATACATGCCAGT +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVECSSE*IQIHAS
Trigger: ACTGGCATGTATCTGGATCAATTCAGAAGAACACTC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCTCTGGGAAGCCATCTaGTTGGTATTGCTTAATTGT +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVLWEAI*LVLLNC
Trigger: ACAATTAAGCAATACCAACAAGATGGCTTCCCAGAG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp GATCTCAGAATATCCACAGTGTTCCAACTCAGCTACACATTATATTTTCCTCTACTGTATTTTCCAGAGTaGGGTAGATCTTTGCATTCT +
Preference number: 5 (lower is better)
Translates to: DLRISTVFQLSYTLYFPLLYFPE*GRSLHS
Trigger: AGAATGCAAAGATCTACCCAACTCTGGAAAATACAG...TAGAGGAAAATATAATGTGTAGCTGAGTTGGAACACTGTGGATATTCTGAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGATAGTATTCTCTTCCTaGAAAGCTACCACCATCTGG +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVIVFSS*KATTIW
Trigger: CCAGATGGTGGTAGCTTTCAAGGAAGAGAATACTAT...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp GTCAATGATGTACCGCATATACAATGGTGGTCCCAGAAGATTATAAAACCATATCAGTCAGACCAAGGATaGTTTTCCACTAATTACACA +
Preference number: 5 (lower is better)
Translates to: VNDVPHIQWWSQKIIKPYQSDQG*FSTNYT
Trigger: TGTGTAATTAGTGGAAAACAATCCTTGGTCTGACTG...ATATGGTTTTATAATCTTCTGGGACCACCATTGTATATGCGGTACATCATTGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGCTGGATAACGATGTTTaGGTCAATGATGTACCGCAT +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVLDNDV*VNDVPH
Trigger: ATGCGGTACATCATTGACCAAAACATCGTTATCCAG...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGTTTGCTGGTTAAAATaGCAGCGATTTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVVCWLK*QRFSSS
Trigger: TGAAGAGGAAAATCGCTGCAATTTTAACCAGCAAAC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS-3UTR CAA 90 bp CTCAAAATAACAGTCTTCAAACATACTACATCTGATCTCAGAATATCCACAGTGGCCATCTTGTTGGTATaGCTTAATTGTTTCGTATGT +
Preference number: 5 (lower is better)
Translates to: LKITVFKHTTSDLRISTVAILLV*LNCFVC
Trigger: ACATACGAAACAATTAAGCAATACCAACAAGATGGC...CACTGTGGATATTCTGAGATCAGATGTAGTATGTTTGAAGACTGTTATTTTGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341115.8
ENST00000370589.7
CDS CAA 90 bp TCGGGAACCCCAGCAGCTGAAGGAGGTATTCGCAGCCAGCCACCCTaGACATTCACCCGGAGCGCCGGCGCGGGAGGCAGGGTGGGCGAA +
Preference number: 6 (lower is better)
Translates to: SGTPAAEGGIRSQPP*TFTRSAGAGGRVGE
Trigger: TTCGCCCACCCTGCCTCCCGCGCCGGCGCTCCGGGTGAATGTCAAGGGTGGCTGGCTGCGAATACCTCCTTCAGCTGCTGGGGTTCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS TCA 72 bp CAGCAGCTGAAGGAGGTATTCGCAGCCAGCCACCCTTaGCATTCACCCGGAGCGCCGGCGCGGGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: QQLKEVFAASHP*HSPGAPAREAG
Trigger: CCCTGCCTCCCGCGCCGGCGCTCCGGGTGAATGTCAAGGGTGGCTGGCTGCGAATACCTCCTTCAGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS CAA 72 bp CCAGCAGCTGAAGGAGGTATTCGCAGCCAGCCACCCTaGACATTCACCCGGAGCGCCGGCGCGGGAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PAAEGGIRSQPP*TFTRSAGAGGR
Trigger: CCTGCCTCCCGCGCCGGCGCTCCGGGTGAATGTCAAGGGTGGCTGGCTGCGAATACCTCCTTCAGCTGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS CAA 72 bp ACACACACAGGTTACCTGTTCCTGGCGGGCAGAGGCTaGATTGGAGTAAGCTGGGGGACAGCGGGGAGCGGC +
Preference number: 6 (lower is better)
Translates to: THTGYLFLAGRG*IGVSWGTAGSG
Trigger: GCCGCTCCCCGCTGTCCCCCAGCTTACTCCAATCAAGCCTCTGCCCGCCAGGAACAGGTAACCTGTGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370587.5
CDS GCA 72 bp AAAGGGTTTGGTGACAGGGAGTCAACAGTCACATCTTaGTTCAAGAATAACCACTTCAGGACACCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: KGFGDRESTVTS*FKNNHFRTPGA
Trigger: GGCCCCTGGTGTCCTGAAGTGGTTATTCTTGAAGCAAGATGTGACTGTTGACTCCCTGTCACCAAACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS CAA 72 bp AAAGGCCCTGAGACAGGAGGGTGCTTGGCAAGGATATaGCATCTGGCTGGAGTGAGCAATAGAAAGGGTATA +
Preference number: 6 (lower is better)
Translates to: KGPETGGCLARI*HLAGVSNRKGI
Trigger: TATACCCTTTCTATTGCTCACTCCAGCCAGATGCAATATCCTTGCCAAGCACCCTCCTGTCTCAGGGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474447.1
CDS GCA 72 bp ATACCTTCTTCATGTGAGCAAGAACTGGTACAACTGTaGTTTCTCCCAAATTCCGGCAGGACCTCAGTTAGG +
Preference number: 6 (lower is better)
Translates to: IPSSCEQELVQL*FLPNSGRTSVR
Trigger: CCTAACTGAGGTCCTGCCGGAATTTGGGAGAAAGCACAGTTGTACCAGTTCTTGCTCACATGAAGAAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS CCA 72 bp ACAAACAGAAGTGATATGATCAGATGTTGGCTGCTGTaGTTGACAGCAGGTTGTTGGAGGAGTGAGGATGCT +
Preference number: 6 (lower is better)
Translates to: TNRSDMIRCWLL*LTAGCWRSEDA
Trigger: AGCATCCTCACTCCTCCAACAACCTGCTGTCAACCACAGCAGCCAACATCTGATCATATCACTTCTGTTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474447.1
CDS CCA 72 bp AGTACCTCCAGATACCTTCTTCATGTGAGCAAGAACTaGTACAACTGTGCTTTCTCCCAAATTCCGGCAGGA +
Preference number: 6 (lower is better)
Translates to: STSRYLLHVSKN*YNCAFSQIPAG
Trigger: TCCTGCCGGAATTTGGGAGAAAGCACAGTTGTACCAGTTCTTGCTCACATGAAGAAGGTATCTGGAGGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS CCA 72 bp TTGAGAACCACAAACAGAAGTGATATGATCAGATGTTaGCTGCTGTGGTTGACAGCAGGTTGTTGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: LRTTNRSDMIRC*LLWLTAGCWRS
Trigger: ACTCCTCCAACAACCTGCTGTCAACCACAGCAGCCAACATCTGATCATATCACTTCTGTTTGTGGTTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474447.1
CDS TCA 72 bp GAGGGTGCTTGGCAAGGATATTGCATCTGGCTGGAGTaGGCAATAGAAAGGGTATACAGTTATAGAGATAAG +
Preference number: 6 (lower is better)
Translates to: EGAWQGYCIWLE*AIERVYSYRDK
Trigger: CTTATCTCTATAACTGTATACCCTTTCTATTGCTCACTCCAGCCAGATGCAATATCCTTGCCAAGCACCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474447.1
CDS CAA 90 bp AGAACCACAAACAGAAGTGATATGATCAGATGTTGGCTGCTGTGGTaGACAGCAGGTTGTTGGAGGAGTGAGGATGCTATTGCAATAATA +
Preference number: 6 (lower is better)
Translates to: RTTNRSDMIRCWLLW*TAGCWRSEDAIAII
Trigger: TATTATTGCAATAGCATCCTCACTCCTCCAACAACCTGCTGTCAACCACAGCAGCCAACATCTGATCATATCACTTCTGTTTGTGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474447.1
CDS GCA 72 bp AGAACACCTTCCATAGTTTTCCTACTGTCTTCCTTATaGAAGGACAGGGAAGGCAAGGCAAGAAAATCAATC +
Preference number: 6 (lower is better)
Translates to: RTPSIVFLLSSL*KDREGKARKSI
Trigger: GATTGATTTTCTTGCCTTGCCTTCCCTGTCCTTGCATAAGGAAGACAGTAGGAAAACTATGGAAGGTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS CAA 90 bp ATTCTTTCAAGGGGACAGGAGACCCAGATTCTCAACTCTGATCTGTaGCTAATTCTGTTCAACCATGGGAAGTTCTCTTCATTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: ILSRGQETQILNSDL*LILFNHGKFSSFLC
Trigger: ACAGAGAAATGAAGAGAACTTCCCATGGTTGAACAGAATTAGCAACAGATCAGAGTTGAGAATCTGGGTCTCCTGTCCCCTTGAAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS TCA 72 bp TATAGCTGCAAGTACTGGTTTACTGCGAAGATTAACTaGTCATACACGTCACTTTGTGTGTACACTGCATAT +
Preference number: 6 (lower is better)
Translates to: YSCKYWFTAKIN*SYTSLCVYTAY
Trigger: ATATGCAGTGTACACACAAAGTGACGTGTATGATCAGTTAATCTTCGCAGTAAACCAGTACTTGCAGCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370587.5
ENST00000370589.7
CDS TCA 72 bp TCTGTTCAACCATGGGAAGTTCTCTTCATTTCTCTGTaGAATGAGAACGATGAACTAGATCTTCTACAGAGA +
Preference number: 6 (lower is better)
Translates to: SVQPWEVLFISL*NENDELDLLQR
Trigger: TCTCTGTAGAAGATCTAGTTCATCGTTCTCATTTCACAGAGAAATGAAGAGAACTTCCCATGGTTGAACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475312.1
CDS TCA 72 bp CACTTATCATTACCCTGGTTTACTGCGAAGATTAACTaGTCATACACGTCACTTTGTGTGTACACTGCATAT +
Preference number: 6 (lower is better)
Translates to: HLSLPWFTAKIN*SYTSLCVYTAY
Trigger: ATATGCAGTGTACACACAAAGTGACGTGTATGATCAGTTAATCTTCGCAGTAAACCAGGGTAATGATAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490600.6
CDS CAA 72 bp TATAAATGTACGAAGTTCAGTCTCTGGGAAGCCATCTaGTTGGTATTGCTTAATTGTTTCGTATGTATCAGT +
Preference number: 6 (lower is better)
Translates to: YKCTKFSLWEAI*LVLLNCFVCIS
Trigger: ACTGATACATACGAAACAATTAAGCAATACCAACAAGATGGCTTCCCAGAGACTGAACTTCGTACATTTATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341115.8
ENST00000370589.7
ENST00000474447.1