RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCMBP (Homo sapiens)

Ensembl gene IDs: ENSG00000197771

Ensembl transcript IDs: ENST00000360003.7, ENST00000369077.4, ENST00000466047.5, ENST00000495407.1, ENST00000569515.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCAAAGTTCCAAACAGGGTTACACAGGAGTCTACTCAGTTTCCTaGCCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAAC +
Preference number: 1 (lower is better)
Translates to: RQSSKQGYTGVYSVS*PYRINAVPYVRATN
Trigger: GTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGGCCAGGAAACTGAGTAGACTCCTGTGTAACCCTGTTTGGAACTTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR TCA 90 bp GCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGTaGATCAATGGCAAGTACGCCTCCGTTCCCCAAAGATGGACTACT +
Preference number: 1 (lower is better)
Translates to: AKHLGNDSTEFHVVM*INGKYASVPQRWTT
Trigger: AGTAGTCCATCTTTGGGGAACGGAGGCGTACTTGCCATTGATTCACATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR GCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTAGATGGACTACTGAATaGACCCCAACCCACTGTGAA +
Preference number: 2 (lower is better)
Translates to: QALHSIPLPGRALSRKVPRWTTE*TPTHCE
Trigger: TTCACAGTGGGTTGGGGTGCATTCAGTAGTCCATCT...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTAGTCATGTGAATCAATaGCAAGTACGCCTCCGTTCC +
Preference number: 2 (lower is better)
Translates to: QALHSIPLPGRALSRKVPSHVNQ*QVRLRS
Trigger: GGAACGGAGGCGTACTTGCCATTGATTCACATGACT...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTCAACCCACTGTGAACTaGAAAAACAGAGAACTAGAA +
Preference number: 2 (lower is better)
Translates to: QALHSIPLPGRALSRKVPQPTVN*KNRELE
Trigger: TTCTAGTTCTCTGTTTTTCCAGTTCACAGTGGGTTG...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTGACAATGTAGTGTCTTaGTTTCTTTTGCCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: QALHSIPLPGRALSRKVPDNVVS*FLLPPK
Trigger: TTTTGGGGGCAAAAGAAACCAAGACACTACATTGTC...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR GCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTCAGGAAGGTCCCTCTTaGACCACCTCCTCCACTTCA +
Preference number: 2 (lower is better)
Translates to: PYRINAVPYVRATNLTVRQEGPS*TTSSTS
Trigger: TGAAGTGGAGGAGGTGGTGCAAGAGGGACCTTCCTG...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR CAA 90 bp TGGCCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTaGACTGTCCGTGTATATATAGGTGAGGGACAAAGGGTTTCTGCA +
Preference number: 2 (lower is better)
Translates to: WPYRINAVPYVRATN*TVRVYIGEGQRVSA
Trigger: TGCAGAAACCCTTTGTCCCTCACCTATATATACACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGCCAAAGATGGACTACTaGATGCACCCCAACCCACTG +
Preference number: 2 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMPKMDY*MHPNPL
Trigger: CAGTGGGTTGGGGTGCATTCAGTAGTCCATCTTTGG...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR GCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTTGGAGAAAACCTACCTaGAGTTGTACGAGGCTGTTA +
Preference number: 2 (lower is better)
Translates to: PYRINAVPYVRATNLTVRWRKPT*SCTRLL
Trigger: TAACAGCCTCGTACAACTGCAGGTAGGTTTTCTCCA...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACTCCGTTCCCCAAAGATaGACTACTGAATGCACCCCA +
Preference number: 2 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNSVPQR*TTECTP
Trigger: TGGGGTGCATTCAGTAGTCCATCTTTGGGGAACGGA...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGCACCCCAACCCACTGTaGACTGGAAAAACAGAGAAC +
Preference number: 2 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMHPNPL*TGKTEN
Trigger: GTTCTCTGTTTTTCCAGTTCACAGTGGGTTGGGGTG...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGAGCATTTCAACAGTCTaGCCTATGACTCAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKSISTV*PMTQLK
Trigger: CTTCAGCTGAGTCATAGGCCAGACTGTTGAAATGCT...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR TCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTAGGTGTTACCAGGCTTaGTTTCAGGAAATGTCACTG +
Preference number: 2 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCRCYQA*FQEMSL
Trigger: CAGTGACATTTCCTGAAATCAAGCCTGGTAACACCT...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR TCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGTTTCATGTAGTCATGTaGATCAATGGCAAGTACGCC +
Preference number: 2 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKFHVVM*INGKYA
Trigger: GGCGTACTTGCCATTGATTCACATGACTACATGAAA...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR TCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTGAATCTTCTTACTCATaGAAAACAGCCCAAGGTACT +
Preference number: 2 (lower is better)
Translates to: PYRINAVPYVRATNLTVRESSYS*KTAQGT
Trigger: AGTACCTTGGGCTGTTTTTCATGAGTAAGAAGATTC...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGGGGAAAAAGTTTCTGTaGCCAAACATCTGGGAAATG +
Preference number: 2 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKGKKFL*PNIWEM
Trigger: CATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCC...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTGCATTCCCTTATGCATaGTTCTCAAATGCACTGGGA +
Preference number: 2 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCAFPYA*FSNALG
Trigger: TCCCAGTGCATTTGAGAACCATGCATAAGGGAATGC...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR TCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCAGGTGTTACCAGGCTTaGTTTCAGGAAATGTCACTG +
Preference number: 2 (lower is better)
Translates to: TTDSLKSNVLTFLKILVARCYQA*FQEMSL
Trigger: CAGTGACATTTCCTGAAATCAAGCCTGGTAACACCT...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR TCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTGTAGCAGATGTTAGCTaGTCTAACATACTTGGAACC +
Preference number: 2 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCVADVS*SNILGT
Trigger: GGTTCCAAGTATGTTAGATCAGCTAACATCTGCTAC...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR GCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGTATGTGGCTACAGTTTaGCCATTACTCTTCATAGGT +
Preference number: 2 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKYVATV*PLLFIG
Trigger: ACCTATGAAGAGTAATGGGCAAACTGTAGCCACATA...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGAGCATTTCAACAGTCTaGCCTATGACTCAGCTGAAG +
Preference number: 2 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMSISTV*PMTQLK
Trigger: CTTCAGCTGAGTCATAGGCCAGACTGTTGAAATGCT...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAAGTCATGTGAATCAATaGCAAGTACGCCTCCGTTCC +
Preference number: 2 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTSHVNQ*QVRLRS
Trigger: GGAACGGAGGCGTACTTGCCATTGATTCACATGACT...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTGGGAAAAAGTTTCTGTaGCCAAACATCTGGGAAATG +
Preference number: 2 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCGKKFL*PNIWEM
Trigger: CATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCC...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGGACAATGTAGTGTCTTaGTTTCTTTTGCCCCCAAAA +
Preference number: 2 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKDNVVS*FLLPPK
Trigger: TTTTGGGGGCAAAAGAAACCAAGACACTACATTGTC...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR TCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGCAAACATCTGGGAAATaGCAGTACAGAATTTCATGT +
Preference number: 2 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKQTSGK*QYRISC
Trigger: ACATGAAATTCTGTACTGTCATTTCCCAGATGTTTG...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR GCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACTATGTGGCTACAGTTTaGCCATTACTCTTCATAGGT +
Preference number: 2 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNYVATV*PLLFIG
Trigger: ACCTATGAAGAGTAATGGGCAAACTGTAGCCACATA...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCCTGTGGCCAAACATCTaGGAAATGACAGTACAGAAT +
Preference number: 2 (lower is better)
Translates to: TTDSLKSNVLTFLKILVALWPNI*EMTVQN
Trigger: ATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAG...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAACTGTGGCCAAACATCTaGGAAATGACAGTACAGAAT +
Preference number: 2 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKLWPNI*EMTVQN
Trigger: ATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAG...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTAGTACCCCAGATTTTTaGAAATATTACTACCGGTCC +
Preference number: 2 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCSTPDF*KYYYRS
Trigger: GGACCGGTAGTAATATTTCCAAAAATCTGGGGTACT...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAATTCAGGAAATGTCACTaGTTTGTGATAGAAATTACC +
Preference number: 2 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKFRKCH*FVIEIT
Trigger: GGTAATTTCTATCACAAACCAGTGACATTTCCTGAA...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCTTCAGGAAATGTCACTaGTTTGTGATAGAAATTACC +
Preference number: 2 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAFRKCH*FVIEIT
Trigger: GGTAATTTCTATCACAAACCAGTGACATTTCCTGAA...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR CCA 72 bp TTTCTGCAGCCAAGCACTGCACTCCATTCCGCTGCCTaGGCGGGCCTTGAGCAGGAAGGTCCCTCTTGCACC +
Preference number: 3 (lower is better)
Translates to: FLQPSTALHSAA*AGLEQEGPSCT
Trigger: GGTGCAAGAGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTGGCTGCAGAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CAA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTGCTGATCTAACATACTaGGAACCAACTGATGATCCC +
Preference number: 3 (lower is better)
Translates to: PYRINAVPYVRATNLTVRADLTY*EPTDDP
Trigger: GGGATCATCAGTTGGTTCCAAGTATGTTAGATCAGC...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CAA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGAAAACCTACCTGCAGTaGTACGAGGCTGTTACTGGA +
Preference number: 3 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKKTYLQ*YEAVTG
Trigger: TCCAGTAACAGCCTCGTACAACTGCAGGTAGGTTTT...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR TCA 72 bp CTGGGAAATGACAGTACAGAATTTCATGTAGTCATGTaGATCAATGGCAAGTACGCCTCCGTTCCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: LGNDSTEFHVVM*INGKYASVPQR
Trigger: TCTTTGGGGAACGGAGGCGTACTTGCCATTGATTCACATGACTACATGAAATTCTGTACTGTCATTTCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CAA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATTTATGTGGCTACAGTTaGCCCATTACTCTTCATAGG +
Preference number: 3 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHLCGYS*PITLHR
Trigger: CCTATGAAGAGTAATGGGCAAACTGTAGCCACATAA...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CAA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTGCTGATCTAACATACTaGGAACCAACTGATGATCCC +
Preference number: 3 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCADLTY*EPTDDP
Trigger: GGGATCATCAGTTGGTTCCAAGTATGTTAGATCAGC...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR TCA 72 bp ACACAGATCACATGGGATGGTGAATCTTCTTACTCATaGAAAACAGCCCAAGGTACTGCTAATTTGGGACGT +
Preference number: 3 (lower is better)
Translates to: TQITWDGESSYS*KTAQGTANLGR
Trigger: ACGTCCCAAATTAGCAGTACCTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CAA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTACGATTCCTCTGACTTaGAAACTGCAACAACCTTCT +
Preference number: 3 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCTIPLT*KLQQPS
Trigger: AGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGT...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR-3UTR CAA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACATTATGTGGCTACAGTTaGCCCATTACTCTTCATAGG +
Preference number: 3 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTLCGYS*PITLHR
Trigger: CCTATGAAGAGTAATGGGCAAACTGTAGCCACATAA...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR TCA 72 bp GTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATaGCAGTACAGAATTTCATGTAGTCATGTGAATCAA +
Preference number: 3 (lower is better)
Translates to: VGKSFCGQTSGK*QYRISCSHVNQ
Trigger: TTGATTCACATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTTGCCTGGGCGGGCCTTaGGCAGGAAGGTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPCLGGP*AGRSLL
Trigger: CAAGAGGGACCTTCCTGCTCAAGGCCCGCCCAGGCA...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTCCTGGGGTATCCAGCTaGCCCTGTTCCAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPPGVSS*PCSRRV
Trigger: GACTCTCCTGGAACAGGGGCAGCTGGATACCCCAGG...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTACGATTCCCAGCGGGTaGCTGAGCCAATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPTIPSG*LSQSSP
Trigger: TGGGGAGGATTGGCTCAGCCACCCGCTGGGAATCGT...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTTCTGCAGCCAAGCACTaGACTCCATTCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPSAAKH*TPFRCL
Trigger: CAGGCAGCGGAATGGAGTGCAGTGCTTGGCTGCAGA...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTCAAGGGAAGTATTGCTaGGCAGCTGGAGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPQGKYC*AAGGAH
Trigger: GTGGGCTCCTCCAGCTGCCCAGCAATACTTCCCTTG...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTGGACTGTGTACTCTCTaGTCCTCTGCTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPGLCTL*SSAVSV
Trigger: CACAGACACAGCAGAGGAGCAGAGAGTACACAGTCC...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTCACATTATGAACACCTaGGGTATCCAGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPHIMNT*GIQLPL
Trigger: CAGGGGCAGCTGGATACCCCAGGTGTTCATAATGTG...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTCCGTGTATATATAGGTaGGGGACAAAGGGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPPCIYR*GTKGFC
Trigger: GCAGAAACCCTTTGTCCCTCACCTATATATACACGG...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTTGCTTGTCTGGCACCTaGATGTTGGTCTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPCLSGT*MLVFLL
Trigger: AAGCAGAAAGACCAACATGCAGGTGCCAGACAAGCA...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTAGGTGTTACCAGGCTTaGTTTCAGGAAATGTCACTG +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPRCYQA*FQEMSL
Trigger: CAGTGACATTTCCTGAAATCAAGCCTGGTAACACCT...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTACAGGATTAACGCTGTaGCTTACGTTAGAGCAACAA +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPTGLTL*LTLEQQ
Trigger: TTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGT...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTCCGCCGAGGAGCTGCTaGCGACAGTCAGGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCPPRSC*RQSGGR
Trigger: GCGCCCGCCTGACTGTCGCCAGCAGCTCCTCGGCGG...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369077.4
CDS-3UTR GCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTTTCTCTATAGTCATCTaGAGACGAAAAGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPFSIVI*RRKDAG
Trigger: TCCAGCATCTTTTCGTCTGCAGATGACTATAGAGAA...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCGGGCCGCCGAGGAGCTaGTGGCGACAGTCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAGPPRS*WRQSGG
Trigger: CCCGCCTGACTGTCGCCAGCAGCTCCTCGGCGGCCC...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369077.4
CDS-3UTR TCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTGCTGGAACAAGATGTTaGATAATTCGATACAAGTGT +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPAGTRC*IIRYKC
Trigger: ACACTTGTATCGAATTATTCAACATCTTGTTCCAGC...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTAAAGAGTTAGATAAATaGGGAATTTGTTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPKELDK*GICSAR
Trigger: CCGTGCTGAACAAATTCCGCATTTATCTAACTCTTT...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTCATCTTCAACTGCCTTaGTTATTTCATCAGATATGC +
Preference number: 4 (lower is better)
Translates to: QALHSIPLPGRALSRKVPHLQLP*LFHQIC
Trigger: GCATATCTGATGAAATAACCAAGGCAGTTGAAGATG...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATGCTGGAGGAGCCCACTaGCCAAGCGATTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHAGGAH*PSDWLC
Trigger: ACACAGCCAATCGCTTGGTCAGTGGGCTCCTCCAGC...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGTGCCTGGGCGGGCCTTaGGCAGGAAGGTCCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMCLGGP*AGRSLL
Trigger: CAAGAGGGACCTTCCTGCTCAAGGCCCGCCCAGGCA...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGACGATTCCCAGCGGGTaGCTGAGCCAATCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKTIPSG*LSQSSP
Trigger: TGGGGAGGATTGGCTCAGCCACCCGCTGGGAATCGT...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAGCTGGGGCTGTAAGTaGATCTGGCAGTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNSWGCK*IWQSAG
Trigger: CCCGGCAGACTGCCAGATTCACTTACAGCCCCAGCT...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGGGCGAAGAATCCCTaGACGATTCCCAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCWAKNP*TIPSGW
Trigger: CCACCCGCTGGGAATCGTGCAGGGATTCTTCGCCCA...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTAGGAGTGTAGGATGTTaGGGGACTGACTCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRRSVGC*GTDSSL
Trigger: CAAGCTCGAGTCAGTCCCTCAACATCCTACACTCCT...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCGCTGGAGGAGCCCACTaGCCAAGCGATTGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAAGGAH*PSDWLC
Trigger: ACACAGCCAATCGCTTGGTCAGTGGGCTCCTCCAGC...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAGTCTGCCGGGAGGAGTaGCCTCCCCTCCGAAGTAAT +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKVCREE*PPLRSN
Trigger: ATTACTTCGGAGGGGAGGTCACTCCTCCCGGCAGAC...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGGTCTGCCGGGAGGAGTaGCCTCCCCTCCGAAGTAAT +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMVCREE*PPLRSN
Trigger: ATTACTTCGGAGGGGAGGTCACTCCTCCCGGCAGAC...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGAGCTGGGGCTGTAAGTaGATCTGGCAGTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMSWGCK*IWQSAG
Trigger: CCCGGCAGACTGCCAGATTCACTTACAGCCCCAGCT...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCTGGGCGAAGAATCCCTaGACGATTCCCAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITWAKNP*TIPSGW
Trigger: CCACCCGCTGGGAATCGTGCAGGGATTCTTCGCCCA...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATACCACCAACACTCCCTaGTTGTCTGGCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHTTNTP*LSGTCM
Trigger: CATGCAGGTGCCAGACAAGCAGGGAGTGTTGGTGGT...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATCCTCTGCTGTGTCTGTaGACTCCATCGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHPLLCL*TPSDPA
Trigger: TGCTGGATCCGATGGAGTGCACAGACACAGCAGAGG...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCCCTGGGGTATCCAGCTaGCCCTGTTCCAGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITPGVSS*PCSRRV
Trigger: GACTCTCCTGGAACAGGGGCAGCTGGATACCCCAGG...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATCAGGAAGGTCCCTCTTaGACCACCTCCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHQEGPS*TTSSTS
Trigger: TGAAGTGGAGGAGGTGGTGCAAGAGGGACCTTCCTG...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTCTGCAGCCAAGCACTaGACTCCATTCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCSAAKH*TPFRCL
Trigger: CAGGCAGCGGAATGGAGTGCAGTGCTTGGCTGCAGA...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGGGGAACTTCGTTCAGTaGTGGTACCCACTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKGNFVQ*WYPLRS
Trigger: GCTCCTAAGTGGGTACCATCACTGAACGAAGTTCCC...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTCCTTCTGCCACGTTATaGGGTTGCTCAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCPSATL*GCSGLS
Trigger: TGACAGCCCTGAGCAACCTCATAACGTGGCAGAAGG...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACGGAAGGCAGCACCGCTaGGAGAAGGCTGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNGRQHR*EKAVHV
Trigger: TACATGAACAGCCTTCTCTCAGCGGTGCTGCCTTCC...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGACCACGAGCAGCTGGTaGAGATCATCAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKTTSSW*RSSAVM
Trigger: CATCACTGCTGATGATCTTCACCAGCTGCTCGTGGT...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACCAGCCATCGTTCTCTTaGCAGCGTTGTCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNQPSFS*QRCLTS
Trigger: GCTGGTCAGACAACGCTGTCAAGAGAACGATGGCTG...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTCAGCCATCGTTCTCTTaGCAGCGTTGTCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCQPSFS*QRCLTS
Trigger: GCTGGTCAGACAACGCTGTCAAGAGAACGATGGCTG...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATCATCGGATCCAGCAGTaGAGAGGCATCCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHHRIQQ*RGIPFI
Trigger: GATGAAAGGGATGCCTCTGCACTGCTGGATCCGATG...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACCAGGAAGGTCCCTCTTaGACCACCTCCTCCACTTCA +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNQEGPS*TTSSTS
Trigger: TGAAGTGGAGGAGGTGGTGCAAGAGGGACCTTCCTG...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAACAAGGGAAGTATTGCTaGGCAGCTGGAGGAGCCCAC +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKQGKYC*AAGGAH
Trigger: GTGGGCTCCTCCAGCTGCCCAGCAATACTTCCCTTG...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTTCCGTTCCCCAAAGATaGACTACTGAATGCACCCCA +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRSVPQR*TTECTP
Trigger: TGGGGTGCATTCAGTAGTCCATCTTTGGGGAACGGA...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCGGCTCTCCACACCATTaGAGACCACCAACACTCCCT +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITGSPHH*RPPTLP
Trigger: AGGGAGTGTTGGTGGTCTTCAATGGTGTGGAGAGCC...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAGGCTCTCCACACCATTaGAGACCACCAACACTCCCT +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKGSPHH*RPPTLP
Trigger: AGGGAGTGTTGGTGGTCTTCAATGGTGTGGAGAGCC...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGTCCCCCAGAAGGGCATaGGTAAGGAACCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQSPRRA*VRNPRS
Trigger: ACTTCTTGGGTTCCTTACTCATGCCCTTCTGGGGGA...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTAGGGCTGTCACATTATaGACACCTGGGGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCRAVTL*TPGVSS
Trigger: GCTGGATACCCCAGGTGTTCATAATGTGACAGCCCT...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCCCTTCTGCCACGTTATaGGGTTGCTCAGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAPSATL*GCSGLS
Trigger: TGACAGCCCTGAGCAACCTCATAACGTGGCAGAAGG...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCGGAAGGCAGCACCGCTaGGAGAAGGCTGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAGRQHR*EKAVHV
Trigger: TACATGAACAGCCTTCTCTCAGCGGTGCTGCCTTCC...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTACCACGAGCAGCTGGTaGAGATCATCAGCAGTGATG +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCTTSSW*RSSAVM
Trigger: CATCACTGCTGATGATCTTCACCAGCTGCTCGTGGT...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCTTGTCTGACCAGCACTaGGAGACAGACACCGAGCCA +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVALSDQH*ETDTEP
Trigger: TGGCTCGGTGTCTGTCTCTCAGTGCTGGTCAGACAA...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGTTGTCTGACCAGCACTaGGAGACAGACACCGAGCCA +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMLSDQH*ETDTEP
Trigger: TGGCTCGGTGTCTGTCTCTCAGTGCTGGTCAGACAA...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTCTTGACAGCGTTGTCTaGCCAGCACTGAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCLDSVV*PALRDR
Trigger: TCTGTCTCTCAGTGCTGGTCAGACAACGCTGTCAAG...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGCACCCCAACCCACTGTaGACTGGAAAAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKHPNPL*TGKTEN
Trigger: GTTCTCTGTTTTTCCAGTTCACAGTGGGTTGGGGTG...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTCCGTGTATATATAGGTaGGGGACAAAGGGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRPCIYR*GTKGFC
Trigger: GCAGAAACCCTTTGTCCCTCACCTATATATACACGG...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCACCACCAACACTCCCTaGTTGTCTGGCACCTGCATG +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITTTNTP*LSGTCM
Trigger: CATGCAGGTGCCAGACAAGCAGGGAGTGTTGGTGGT...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCCCTCTGCTGTGTCTGTaGACTCCATCGGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAPLLCL*TPSDPA
Trigger: TGCTGGATCCGATGGAGTGCACAGACACAGCAGAGG...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGTTACAAGGGAAGTATTaGTGGGCAGCTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQLQGKY*WAAGGA
Trigger: GGCTCCTCCAGCTGCCCAGCAATACTTCCCTTGTAA...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATCTGGCACCTGCATGTTaGTCTTTCTGCTTATTGGGC +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHLAPAC*SFCLLG
Trigger: GCCCAATAAGCAGAAAGACCAACATGCAGGTGCCAG...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACCACATTATGAACACCTaGGGTATCCAGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNHIMNT*GIQLPL
Trigger: CAGGGGCAGCTGGATACCCCAGGTGTTCATAATGTG...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGGGGAACTTCGTTCAGTaGTGGTACCCACTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMGNFVQ*WYPLRS
Trigger: GCTCCTAAGTGGGTACCATCACTGAACGAAGTTCCC...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGAGGATGTTGAGGGACTaGCTCGAGCTTGGTTTGCAT +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQRMLRD*LELGLH
Trigger: ATGCAAACCAAGCTCGAGTCAGTCCCTCAACATCCT...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAAGGAGTGTAGGATGTTaGGGGACTGACTCGAGCTTG +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKRSVGC*GTDSSL
Trigger: CAAGCTCGAGTCAGTCCCTCAACATCCTACACTCCT...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCTCCCCCAGAAGGGCATaGGTAAGGAACCCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITSPRRA*VRNPRS
Trigger: ACTTCTTGGGTTCCTTACTCATGCCCTTCTGGGGGA...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAAGGGCTGTCACATTATaGACACCTGGGGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKRAVTL*TPGVSS
Trigger: GCTGGATACCCCAGGTGTTCATAATGTGACAGCCCT...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGTCAGCAGTGATGCTCTaGGGGTCGTTCTTCCGCATT +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMSAVML*GSFFRI
Trigger: AATGCGGAAGAACGACCCTCAGAGCATCACTGCTGA...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCTCAGCAGTGATGCTCTaGGGGTCGTTCTTCCGCATT +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVASAVML*GSFFRI
Trigger: AATGCGGAAGAACGACCCTCAGAGCATCACTGCTGA...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGGAAGATCATCAGCAGTaGTGCTCTGAGGGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQEDHQQ*CSEGRS
Trigger: AGAACGACCCTCAGAGCATCACTGCTGATGATCTTC...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTAGGTGTTACCAGGCTTaGTTTCAGGAAATGTCACTG +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRRCYQA*FQEMSL
Trigger: CAGTGACATTTCCTGAAATCAAGCCTGGTAACACCT...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGCACCCCAACCCACTGTaGACTGGAAAAACAGAGAAC +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQHPNPL*TGKTEN
Trigger: GTTCTCTGTTTTTCCAGTTCACAGTGGGTTGGGGTG...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAACCAAAGATGGACTACTaGATGCACCCCAACCCACTG +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKPKMDY*MHPNPL
Trigger: CAGTGGGTTGGGGTGCATTCAGTAGTCCATCTTTGG...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTAGAGAGTTCAGCTGTTaGCCAGTAGAAGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRREFSC*PVEASV
Trigger: AACTGAAGCTTCTACTGGGCAACAGCTGAACTCTCT...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCTTACAAGGGAAGTATTaGTGGGCAGCTGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVALQGKY*WAAGGA
Trigger: GGCTCCTCCAGCTGCCCAGCAATACTTCCCTTGTAA...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTCTTAAAGACTCTAGCTaGTTTGCTCTCAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRLKDSS*FALSHR
Trigger: ACGATGGCTGAGAGCAAAGCAGCTAGAGTCTTTAAG...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTGCATTCCCTTATGCATaGTTCTCAAATGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRAFPYA*FSNALG
Trigger: TCCCAGTGCATTTGAGAACCATGCATAAGGGAATGC...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTGTCTACTCAGTTTCCTaGCCATACAGGATTAACGCT +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRVYSVS*PYRINA
Trigger: AGCGTTAATCCTGTATGGCCAGGAAACTGAGTAGAC...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTGATACAAGTGTTCTGTaGAGGTACTATTCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCDTSVL*RYYSVG
Trigger: GCCCACGGAATAGTACCTTCACAGAACACTTGTATC...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTGATACAAGTGTTCTGTaGAGGTACTATTCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCDTSVL*RYYSVG
Trigger: GCCCACGGAATAGTACCTTCACAGAACACTTGTATC...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGGCATGTTGGTCTTTCTaGTTATTGGGCTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQACWSF*LLGCRS
Trigger: GGACCTACAGCCCAATAAGCAGAAAGACCAACATGC...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACTGCTTGTCTGGCACCTaGATGTTGGTCTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNCLSGT*MLVFLL
Trigger: AAGCAGAAAGACCAACATGCAGGTGCCAGACAAGCA...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATAGAGAGTTCAGCTGTTaGCCAGTAGAAGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHREFSC*PVEASV
Trigger: AACTGAAGCTTCTACTGGGCAACAGCTGAACTCTCT...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACACATCGGATCCAGCAGTaGAGAGGCATCCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTHRIQQ*RGIPFI
Trigger: GATGAAAGGGATGCCTCTGCACTGCTGGATCCGATG...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGGACTGTGTACTCTCTaGTCCTCTGCTGTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTGLCTL*SSAVSV
Trigger: CACAGACACAGCAGAGGAGCAGAGAGTACACAGTCC...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGAGATGGACTACTGAATaGACCCCAACCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQRWTTE*TPTHCE
Trigger: TTCACAGTGGGTTGGGGTGCATTCAGTAGTCCATCT...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTAGATGGACTACTGAATaGACCCCAACCCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCRWTTE*TPTHCE
Trigger: TTCACAGTGGGTTGGGGTGCATTCAGTAGTCCATCT...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGTGGAGAAAACCTACCTaGAGTTGTACGAGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKWRKPT*SCTRLL
Trigger: TAACAGCCTCGTACAACTGCAGGTAGGTTTTCTCCA...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAACTGGCACCTGCATGTTaGTCTTTCTGCTTATTGGGC +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKLAPAC*SFCLLG
Trigger: GCCCAATAAGCAGAAAGACCAACATGCAGGTGCCAG...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATAGGGCCCTTCTCTCCTaGCAATGGAAAATTCAAATC +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHRALLS*QWKIQI
Trigger: GATTTGAATTTTCCATTGCCAGGAGAGAAGGGCCCT...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATAGCATTTCAACAGTCTaGCCTATGACTCAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHSISTV*PMTQLK
Trigger: CTTCAGCTGAGTCATAGGCCAGACTGTTGAAATGCT...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCTCCGTTCCCCAAAGATaGACTACTGAATGCACCCCA +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVASVPQR*TTECTP
Trigger: TGGGGTGCATTCAGTAGTCCATCTTTGGGGAACGGA...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTAGTCATGTGAATCAATaGCAAGTACGCCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCSHVNQ*QVRLRS
Trigger: GGAACGGAGGCGTACTTGCCATTGATTCACATGACT...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTGGGAAAAAGTTTCTGTaGCCAAACATCTGGGAAATG +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRGKKFL*PNIWEM
Trigger: CATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCC...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTTCCACACAGATCACATaGGATGGTGAATCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRSTQIT*DGESSY
Trigger: GTAAGAAGATTCACCATCCCATGTGATCTGTGTGGA...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR CAA 72 bp AGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTaGACTGTCCGTGTATATATAGGTGAGGGACAAAGG +
Preference number: 4 (lower is better)
Translates to: RINAVPYVRATN*TVRVYIGEGQR
Trigger: CCTTTGTCCCTCACCTATATATACACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGTGGGCTAAGATCACATaGATTCTCGGCACTAATGAA +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKWAKIT*ILGTNE
Trigger: TTCATTAGTGCCGAGAATTCATGTGATCTTAGCCCA...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAACAGGCAATAATGGGTTaGTGTGTTGCAACTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKQAIMG*CVATSG
Trigger: CCCAGAAGTTGCAACACATCAACCCATTATTGCCTG...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCCAAGAAGTTCTGCTCTaGCTGGAGACAATTCGGACA +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITQEVLL*LETIRT
Trigger: TGTCCGAATTGTCTCCAGTCAGAGCAGAACTTCTTG...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCCAAGAAGTTCTGCTCTaGCTGGAGACAATTCGGACA +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAQEVLL*LETIRT
Trigger: TGTCCGAATTGTCTCCAGTCAGAGCAGAACTTCTTG...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTCCATCTGATGGTAGCTaGAGTCATAATCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCPSDGS*SHNPPS
Trigger: AGAAGGTGGATTATGACTTCAGCTACCATCAGATGG...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAAGATCATCAGCAGTaGTGCTCTGAGGGTCGTTCT +
Preference number: 4 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTEDHQQ*CSEGRS
Trigger: AGAACGACCCTCAGAGCATCACTGCTGATGATCTTC...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAGCATGTTGGTCTTTCTaGTTATTGGGCTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKACWSF*LLGCRS
Trigger: GGACCTACAGCCCAATAAGCAGAAAGACCAACATGC...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTGAACCCAAGAAGTTCTaGTCTGACTGGAGACAATTC +
Preference number: 4 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCEPKKF*SDWRQF
Trigger: GAATTGTCTCCAGTCAGAGCAGAACTTCTTGGGTTC...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACGAACCCAAGAAGTTCTaGTCTGACTGGAGACAATTC +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNEPKKF*SDWRQF
Trigger: GAATTGTCTCCAGTCAGAGCAGAACTTCTTGGGTTC...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTCTGCAGACGAAAAGATaGTGGAACAAGATGTTGAAT +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRLQTKR*WNKMLN
Trigger: ATTCAACATCTTGTTCCAGCATCTTTTCGTCTGCAG...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGCACAGCATTCCCTTATaGATGGTTCTCAAATGCACT +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKHSIPL*MVLKCT
Trigger: AGTGCATTTGAGAACCATGCATAAGGGAATGCTGTG...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGTGGAGAAAACCTACCTaGAGTTGTACGAGGCTGTTA +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQWRKPT*SCTRLL
Trigger: TAACAGCCTCGTACAACTGCAGGTAGGTTTTCTCCA...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTAAGGGATCCTTTATCTaGCTCCAACTAGGTAAGTTA +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRKGSFI*LQLGKL
Trigger: TAACTTACCTAGTTGGAGGCAGATAAAGGATCCCTT...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATAAGTTCTGCTCTGACTaGAGACAATTCGGACATGAA +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHKFCSD*RQFGHE
Trigger: TTCATGTCCGAATTGTCTCCAGTCAGAGCAGAACTT...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTGAAGGTACTATTCCGTaGGCAACCACTCAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCEGTIP*ATTQVN
Trigger: GTTAACTTGAGTGGTTGCCCACGGAATAGTACCTTC...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCAGTCATGTGAATCAATaGCAAGTACGCCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVASHVNQ*QVRLRS
Trigger: GGAACGGAGGCGTACTTGCCATTGATTCACATGACT...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGGCATTCCCTTATGCATaGTTCTCAAATGCACTGGGA +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQAFPYA*FSNALG
Trigger: TCCCAGTGCATTTGAGAACCATGCATAAGGGAATGC...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTCCACCAAGAGGACATaGTCTTTTTCCACACAGATC +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCSTKRT*SFSTQI
Trigger: GATCTGTGTGGAAAAAGACCATGTCCTCTTGGTGGA...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTGTCTACTCAGTTTCCTaGCCATACAGGATTAACGCT +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCVYSVS*PYRINA
Trigger: AGCGTTAATCCTGTATGGCCAGGAAACTGAGTAGAC...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
3UTR CAA 72 bp TTAAAACTAATTGGTCTGGAGAAAACCTACCTGCAGTaGTACGAGGCTGTTACTGGAGTAGCAGATGTTAGC +
Preference number: 4 (lower is better)
Translates to: LKLIGLEKTYLQ*YEAVTGVADVS
Trigger: GCTAACATCTGCTACTCCAGTAACAGCCTCGTACAACTGCAGGTAGGTTTTCTCCAGACCAATTAGTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGGGGTCAAACATATCCTaGATCATGCAACGAAATTTC +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKGSNIS*IMQRNF
Trigger: GAAATTTCGTTGCATGATTCAGGATATGTTTGACCC...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTTTTCATGTAGTCATGTaGATCAATGGCAAGTACGCC +
Preference number: 4 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCFHVVM*INGKYA
Trigger: GGCGTACTTGCCATTGATTCACATGACTACATGAAA...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATGAATCTTCTTACTCATaGAAAACAGCCCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHESSYS*KTAQGT
Trigger: AGTACCTTGGGCTGTTTTTCATGAGTAAGAAGATTC...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTTTGAGGCCCACACTCTaGTACATCTCTATATTTTCC +
Preference number: 4 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCLRPTL*YISIFS
Trigger: GGAAAATATAGAGATGTAGCAGAGTGTGGGCCTCAA...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGGATCCACAGACAGTATaGCATATAGCTCAAGAATGT +
Preference number: 4 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKDPQTV*HIAQEC
Trigger: ACATTCTTGAGCTATATGGCATACTGTCTGTGGATC...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATTTCTCTATAGTCATCTaGAGACGAAAAGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHFSIVI*RRKDAG
Trigger: TCCAGCATCTTTTCGTCTGCAGATGACTATAGAGAA...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGCTTAAAGACTCTAGCTaGTTTGCTCTCAGCCATCGT +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMLKDSS*FALSHR
Trigger: ACGATGGCTGAGAGCAAAGCAGCTAGAGTCTTTAAG...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAGGTCTTTCTGCTTATTaGGCTGTAGGTCCATATCGT +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKGLSAY*AVGPYR
Trigger: ACGATATGGACCTACAGCCCAATAAGCAGAAAGACC...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCAGGGCCCTTCTCTCCTaGCAATGGAAAATTCAAATC +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVARALLS*QWKIQI
Trigger: GATTTGAATTTTCCATTGCCAGGAGAGAAGGGCCCT...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAGTTCTGCTCTGACTaGAGACAATTCGGACATGAA +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNKFCSD*RQFGHE
Trigger: TTCATGTCCGAATTGTCTCCAGTCAGAGCAGAACTT...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTCTGTGGCCAAACATCTaGGAAATGACAGTACAGAAT +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCLWPNI*EMTVQN
Trigger: ATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAG...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCTGGGCTAAGATCACATaGATTCTCGGCACTAATGAA +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITWAKIT*ILGTNE
Trigger: TTCATTAGTGCCGAGAATTCATGTGATCTTAGCCCA...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACACCATCTGATGGTAGCTaGAGTCATAATCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTPSDGS*SHNPPS
Trigger: AGAAGGTGGATTATGACTTCAGCTACCATCAGATGG...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAGTAGCAGATGTTAGCTaGTCTAACATACTTGGAACC +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKVADVS*SNILGT
Trigger: GGTTCCAAGTATGTTAGATCAGCTAACATCTGCTAC...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGGATCACATGGGATGGTaGATCTTCTTACTCATGAAA +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQDHMGW*IFLLMK
Trigger: TTTCATGAGTAAGAAGATTCACCATCCCATGTGATC...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTTCGGACATGAAACTTaGAACAAAGGTTTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCFGHET*NKGFAL
Trigger: GAGAGCAAAACCTTTGTTTCAAGTTTCATGTCCGAA...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369077.4
CDS-3UTR GCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCTTGAGGCCCACACTCTaGTACATCTCTATATTTTCC +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITLRPTL*YISIFS
Trigger: GGAAAATATAGAGATGTAGCAGAGTGTGGGCCTCAA...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTGACTCGAGCTTGGTTTaGATTAACATAGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCDSSLV*INIGFF
Trigger: AAAGAAGCCTATGTTAATGCAAACCAAGCTCGAGTC...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAAATGGGTTGATGTGTTaGAACTTCTGGGCTAAGATC +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKNGLMC*NFWAKI
Trigger: GATCTTAGCCCAGAAGTTGCAACACATCAACCCATT...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCAATGGGTTGATGTGTTaGAACTTCTGGGCTAAGATC +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITNGLMC*NFWAKI
Trigger: GATCTTAGCCCAGAAGTTGCAACACATCAACCCATT...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTCTGCAGACGAAAAGATaGTGGAACAAGATGTTGAAT +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCLQTKR*WNKMLN
Trigger: ATTCAACATCTTGTTCCAGCATCTTTTCGTCTGCAG...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTAAAGTCATCTTCAACTaGCTTGGTTATTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: PYRINAVPYVRATNLTVRKVIFN*LGYFIR
Trigger: TCTGATGAAATAACCAAGGCAGTTGAAGATGACTTT...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCCACAGCATTCCCTTATaGATGGTTCTCAAATGCACT +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAHSIPL*MVLKCT
Trigger: AGTGCATTTGAGAACCATGCATAAGGGAATGCTGTG...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCACAGGATTAACGCTGTaGCTTACGTTAGAGCAACAA +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVATGLTL*LTLEQQ
Trigger: TTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGT...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTCAACCCACTGTGAACTaGAAAAACAGAGAACTAGAA +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCQPTVN*KNRELE
Trigger: TTCTAGTTCTCTGTTTTTCCAGTTCACAGTGGGTTG...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAGGGTCAAACATATCCTaGATCATGCAACGAAATTTC +
Preference number: 4 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKGSNIS*IMQRNF
Trigger: GAAATTTCGTTGCATGATTCAGGATATGTTTGACCC...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACGAGACAATTCGGACATaGAACTTGAAACAAACTTAC +
Preference number: 4 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNETIRT*NLKQTY
Trigger: GTAAGTTTGTTTCAAGTTTCATGTCCGAATTGTCTC...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360003.7
CDS-3UTR TCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCACACATTTTTGCTGCTaGAGCCTCGTTCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITTHFCC*SLVLLK
Trigger: TTTAAGAAGAACGAGGCTTCAGCAGCAAAAATGTGT...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGACACATTTTTGCTGCTaGAGCCTCGTTCTTCTTAAA +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMTHFCC*SLVLLK
Trigger: TTTAAGAAGAACGAGGCTTCAGCAGCAAAAATGTGT...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCGAATCTTCTTACTCATaGAAAACAGCCCAAGGTACT +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITESSYS*KTAQGT
Trigger: AGTACCTTGGGCTGTTTTTCATGAGTAAGAAGATTC...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGGATCACATGGGATGGTaGATCTTCTTACTCATGAAA +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMDHMGW*IFLLMK
Trigger: TTTCATGAGTAAGAAGATTCACCATCCCATGTGATC...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCGATCCACAGACAGTATaGCATATAGCTCAAGAATGT +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITDPQTV*HIAQEC
Trigger: ACATTCTTGAGCTATATGGCATACTGTCTGTGGATC...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCTATGTGGCTACAGTTTaGCCATTACTCTTCATAGGT +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITYVATV*PLLFIG
Trigger: ACCTATGAAGAGTAATGGGCAAACTGTAGCCACATA...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGTATGTGGCTACAGTTTaGCCATTACTCTTCATAGGT +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMYVATV*PLLFIG
Trigger: ACCTATGAAGAGTAATGGGCAAACTGTAGCCACATA...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTCTGTCTTTCCAAAGTaGTATTTCGTGGAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCSVFPK*YFVESL
Trigger: TAAACTCTCCACGAAATACCACTTTGGAAAGACAGA...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGCATCTTCAACTGCCTTaGTTATTTCATCAGATATGC +
Preference number: 4 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQHLQLP*LFHQIC
Trigger: GCATATCTGATGAAATAACCAAGGCAGTTGAAGATG...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCAGTACCCCAGATTTTTaGAAATATTACTACCGGTCC +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITSTPDF*KYYYRS
Trigger: GGACCGGTAGTAATATTTCCAAAAATCTGGGGTACT...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCGACAATGTAGTGTCTTaGTTTCTTTTGCCCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITDNVVS*FLLPPK
Trigger: TTTTGGGGGCAAAAGAAACCAAGACACTACATTGTC...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACATCCACACAGATCACATaGGATGGTGAATCTTCTTAC +
Preference number: 4 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTSTQIT*DGESSY
Trigger: GTAAGAAGATTCACCATCCCATGTGATCTGTGTGGA...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCGCTGGAACAAGATGTTaGATAATTCGATACAAGTGT +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITAGTRC*IIRYKC
Trigger: ACACTTGTATCGAATTATTCAACATCTTGTTCCAGC...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGCAAACATCTGGGAAATaGCAGTACAGAATTTCATGT +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMQTSGK*QYRISC
Trigger: ACATGAAATTCTGTACTGTCATTTCCCAGATGTTTG...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCAAAGAGTTAGATAAATaGGGAATTTGTTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITKELDK*GICSAR
Trigger: CCGTGCTGAACAAATTCCGCATTTATCTAACTCTTT...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR GCA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACATGCATGGTTCTCAAATaGACTGGGATAGGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTCMVLK*TGIGEN
Trigger: ATTTTCTCCTATCCCAGTGCATTTGAGAACCATGCA...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCTCTGTCTTTCCAAAGTaGTATTTCGTGGAGAGTTTA +
Preference number: 4 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITSVFPK*YFVESL
Trigger: TAAACTCTCCACGAAATACCACTTTGGAAAGACAGA...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTCAGACGAAAAGATGCTaGAACAAGATGTTGAATAAT +
Preference number: 4 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCQTKRC*NKMLNN
Trigger: ATTATTCAACATCTTGTTCCAGCATCTTTTCGTCTG...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTTTCAGGAAATGTCACTaGTTTGTGATAGAAATTACC +
Preference number: 4 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCFRKCH*FVIEIT
Trigger: GGTAATTTCTATCACAAACCAGTGACATTTCCTGAA...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR TCA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAGACAATTCGGACATaGAACTTGAAACAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTETIRT*NLKQRF
Trigger: AAACCTTTGTTTCAAGTTTCATGTCCGAATTGTCTC...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369077.4
CDS-3UTR GCA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGAAAGTCATCTTCAACTaGCTTGGTTATTTCATCAGA +
Preference number: 4 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMKVIFN*LGYFIR
Trigger: TCTGATGAAATAACCAAGGCAGTTGAAGATGACTTT...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CCA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCCAGACGAAAAGATGCTaGAACAAGATGTTGAATAAT +
Preference number: 4 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAQTKRC*NKMLNN
Trigger: ATTATTCAACATCTTGTTCCAGCATCTTTTCGTCTG...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS CCA 90 bp GGCCCGGCCTGCGCCCTGGTTGCGAACACCGGGTCGGCGTCTGTCTaGAAGCTGGCAGCCGCCGTCGGGGAGCGGTGCGAGGCTCCTGCA +
Preference number: 5 (lower is better)
Translates to: GPACALVANTGSASV*KLAAAVGERCEAPA
Trigger: TGCAGGAGCCTCGCACCGCTCCCCGACGGCGGCTGCCAGCTTCCAGACAGACGCCGACCCGGTGTTCGCAACCAGGGCGCAGGCCGGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS GCA 90 bp AGGGGCGGGCGCTCTAAACGCTCCGGGCCCGGCCTGCGCCCTGGTTaGGAACACCGGGTCGGCGTCTGTCTGGAAGCTGGCAGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: RGGRSKRSGPGLRPG*EHRVGVCLEAGSRR
Trigger: ACGGCGGCTGCCAGCTTCCAGACAGACGCCGACCCGGTGTTCGCAACCAGGGCGCAGGCCGGGCCCGGAGCGTTTAGAGCGCCCGCCCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS GCA 90 bp GGGTCGGCGTCTGTCTGGAAGCTGGCAGCCGCCGTCGGGGAGCGGTaGGAGGCTCCTGCACTGCGCGCCGCTAGGATACCCTGGAGAAGG +
Preference number: 5 (lower is better)
Translates to: GSASVWKLAAAVGER*EAPALRAARIPWRR
Trigger: CCTTCTCCAGGGTATCCTAGCGGCGCGCAGTGCAGGAGCCTCGCACCGCTCCCCGACGGCGGCTGCCAGCTTCCAGACAGACGCCGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS GCA 90 bp CATTTTGGGCGAGGGGCGGGCGCTCTAAACGCTCCGGGCCCGGCCTaGGCCCTGGTTGCGAACACCGGGTCGGCGTCTGTCTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: HFGRGAGALNAPGPA*ALVANTGSASVWKL
Trigger: CAGCTTCCAGACAGACGCCGACCCGGTGTTCGCAACCAGGGCGCAGGCCGGGCCCGGAGCGTTTAGAGCGCCCGCCCCTCGCCCAAAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS GCA 90 bp GGAAGCTGGCAGCCGCCGTCGGGGAGCGGTGCGAGGCTCCTGCACTaGGCGCCGCTAGGATACCCTGGAGAAGGAAGCTACGAAGACCGA +
Preference number: 5 (lower is better)
Translates to: GSWQPPSGSGARLLH*APLGYPGEGSYEDR
Trigger: TCGGTCTTCGTAGCTTCCTTCTCCAGGGTATCCTAGCGGCGCGCAGTGCAGGAGCCTCGCACCGCTCCCCGACGGCGGCTGCCAGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS-3UTR CAA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTCTGCCTGGGCGGGCCTaGAGCAGGAAGGTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: QALHSIPLPGRALSRKVPLPGRA*SRKVPL
Trigger: AAGAGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAG...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTACCAACACTCCCTGCTaGTCTGGCACCTGCATGTTG +
Preference number: 5 (lower is better)
Translates to: QALHSIPLPGRALSRKVPTNTPC*SGTCML
Trigger: CAACATGCAGGTGCCAGACAAGCAGGGAGTGTTGGT...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTTGCCACGTTATGAGGTaGCTCAGGGCTGTCACATTA +
Preference number: 5 (lower is better)
Translates to: QALHSIPLPGRALSRKVPCHVMR*LRAVTL
Trigger: TAATGTGACAGCCCTGAGCAACCTCATAACGTGGCA...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS TCA 90 bp TCTAGCTGCTTTGCTCTCAGCCATCGTTCTCTTGACAGCGTTGTCTaGCCAGCACTGAGAGACAGACACCGAGCCACCACGAGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SSCFALSHRSLDSVV*PALRDRHRATTSSW
Trigger: CCAGCTGCTCGTGGTGGCTCGGTGTCTGTCTCTCAGTGCTGGTCAGACAACGCTGTCAAGAGAACGATGGCTGAGAGCAAAGCAGCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS-3UTR CAA 90 bp CAAGCACTGCACTCCATTCCGCTGCCTGGGCGGGCCTTGAGCAGGAAGGTCCCTCAGTTTCTAAACGTTTaGGCTCTCCACACCATTGAA +
Preference number: 5 (lower is better)
Translates to: QALHSIPLPGRALSRKVPQFLNV*ALHTIE
Trigger: TTCAATGGTGTGGAGAGCCAAAACGTTTAGAAACTG...AGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAGCGGAATGGAGTGCAGTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS TCA 90 bp TCAGTGAGGCCAAGAACCCACCGGAAGGAACCAACTCCGGACACATaGCCACTGAGAACTGTCTTCTCAAGGACCTGGGGGTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: SVRPRTHRKEPTPDT*PLRTVFSRTWGFVS
Trigger: AGAGACAAACCCCCAGGTCCTTGAGAAGACAGTTCTCAGTGGTCATGTGTCCGGAGTTGGTTCCTTCCGGTGGGTTCTTGGCCTCACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS TCA 90 bp GGCCAAGAACCCACCGGAAGGAACCAACTCCGGACACATGACCACTaGGAACTGTCTTCTCAAGGACCTGGGGGTTTGTCTCTTGAATTG +
Preference number: 5 (lower is better)
Translates to: GQEPTGRNQLRTHDH*ELSSQGPGGLSLEL
Trigger: CAATTCAAGAGACAAACCCCCAGGTCCTTGAGAAGACAGTTCTCAGTGGTCATGTGTCCGGAGTTGGTTCCTTCCGGTGGGTTCTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS GCA 90 bp ATGAAGCAGGAGGACTGTGTACTCTCTGCTCCTCTGCTGTGTCTGTaGACTCCATCGGATCCAGCAGTGCAGAGGCATCCCTTTCATCAT +
Preference number: 5 (lower is better)
Translates to: MKQEDCVLSAPLLCL*TPSDPAVQRHPFHH
Trigger: ATGATGAAAGGGATGCCTCTGCACTGCTGGATCCGATGGAGTGCACAGACACAGCAGAGGAGCAGAGAGTACACAGTCCTCCTGCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
ENST00000495407.1
CDS GCA 90 bp GTGGCTACCTTGCTCTCTTACACCACTGTGACTTTCAGGGTCAATTaGGTCTCAATTCGCACGTCTATCCAGAACCTGCGGGGACCACGT +
Preference number: 5 (lower is better)
Translates to: VATLLSYTTVTFRVN*VSIRTSIQNLRGPR
Trigger: ACGTGGTCCCCGCAGGTTCTGGATAGACGTGCGAATTGAGACGCAATTGACCCTGAAAGTCACAGTGGTGTAAGAGAGCAAGGTAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS TCA 90 bp ACAGACACCGAGCCACCACGAGCAGCTGGTGAAGATCATCAGCAGTaGTGCTCTGAGGGTCGTTCTTCCGCATTTCCACAAAGTCATCTT +
Preference number: 5 (lower is better)
Translates to: TDTEPPRAAGEDHQQ*CSEGRSSAFPQSHL
Trigger: AAGATGACTTTGTGGAAATGCGGAAGAACGACCCTCAGAGCATCACTGCTGATGATCTTCACCAGCTGCTCGTGGTGGCTCGGTGTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS-3UTR CAA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGCTGCCTGGGCGGGCCTaGAGCAGGAAGGTCCCTCTT +
Preference number: 5 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMLPGRA*SRKVPL
Trigger: AAGAGGGACCTTCCTGCTCAAGGCCCGCCCAGGCAG...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS TCA 90 bp TCTCATTCCCAGTCCCTGTGGCTACCTTGCTCTCTTACACCACTGTaGCTTTCAGGGTCAATTGCGTCTCAATTCGCACGTCTATCCAGA +
Preference number: 5 (lower is better)
Translates to: SHSQSLWLPCSLTPL*LSGSIASQFARLSR
Trigger: TCTGGATAGACGTGCGAATTGAGACGCAATTGACCCTGAAAGTCACAGTGGTGTAAGAGAGCAAGGTAGCCACAGGGACTGGGAATGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS GCA 90 bp ACTGAGAACTGTCTTCTCAAGGACCTGGGGGTTTGTCTCTTGAATTaGAAGCCTTCAAGGAGGTGGTTCTCATTCTCATTCCCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: TENCLLKDLGVCLLN*KPSRRWFSFSFPVP
Trigger: AGGGACTGGGAATGAGAATGAGAACCACCTCCTTGAAGGCTTGCAATTCAAGAGACAAACCCCCAGGTCCTTGAGAAGACAGTTCTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS-3UTR CAA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTACCAACACTCCCTGCTaGTCTGGCACCTGCATGTTG +
Preference number: 5 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCTNTPC*SGTCML
Trigger: CAACATGCAGGTGCCAGACAAGCAGGGAGTGTTGGT...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTTGTACTCCTCCATGTTaGGTGGAATTAGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: PYRINAVPYVRATNLTVRCTPPC*VELAGA
Trigger: AGCCCCAGCTAATTCCACCAAACATGGAGGAGTACA...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS TCA 90 bp GGCAATAATGGGTTGATGTGTTGCAACTTCTGGGCTAAGATCACATaGATTCTCGGCACTAATGAAGCAGGAGGACTGTGTACTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GNNGLMCCNFWAKIT*ILGTNEAGGLCTLC
Trigger: GCAGAGAGTACACAGTCCTCCTGCTTCATTAGTGCCGAGAATTCATGTGATCTTAGCCCAGAAGTTGCAACACATCAACCCATTATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
ENST00000495407.1
CDS TCA 90 bp ACGTTACAGGCAGCTCTGGACACACTGAGGCTAACAGTCGATAGTTaGCTAGGCTGTAACACTTACACTTACAGGTTTTGCTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: TLQAALDTLRLTVDS*LGCNTYTYRFCSPL
Trigger: AAGAGGAGAGCAAAACCTGTAAGTGTAAGTGTTACAGCCTAGTCAACTATCGACTGTTAGCCTCAGTGTGTCCAGAGCTGCCTGTAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495407.1
CDS-3UTR CAA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACATTACAAGGGAAGTATaGCTGGGCAGCTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNITREV*LGSWRS
Trigger: GCTCCTCCAGCTGCCCAGCAATACTTCCCTTGTAAT...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGTCAGCCATCGTTCTCTaGACAGCGTTGTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQSAIVL*TALSDQ
Trigger: CTGGTCAGACAACGCTGTCAAGAGAACGATGGCTGA...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS TCA 90 bp TGTAATATAAGGTATTCAGCAGCCAAACTATCCCCCAGAAGGGCATaGGTAAGGAACCCAAGAAGTTCTGCTCTGACTGGAGACAATTCG +
Preference number: 5 (lower is better)
Translates to: CNIRYSAAKLSPRRA*VRNPRSSALTGDNS
Trigger: CGAATTGTCTCCAGTCAGAGCAGAACTTCTTGGGTTCCTTACTCATGCCCTTCTGGGGGATAGTTTGGCTGCTGAATACCTTATATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS TCA 90 bp TGGGGCAACGAGAGAGAGATTACTGAAAACACTTATTGTGAGGAATaGAGACCTGACTCTCAATTCCACTATGAGCACGTTACAGGCAGC +
Preference number: 5 (lower is better)
Translates to: WGNEREITENTYCEE*RPDSQFHYEHVTGS
Trigger: GCTGCCTGTAACGTGCTCATAGTGGAATTGAGAGTCAGGTCTTCATTCCTCACAATAAGTGTTTTCAGTAATCTCTCTCTCGTTGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495407.1
CDS-3UTR CAA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGGGGACTGACTCGAGCTaGGTTTGCATTAACATAGGC +
Preference number: 5 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQGTDSS*VCINIG
Trigger: GCCTATGTTAATGCAAACCAAGCTCGAGTCAGTCCC...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACTCTGGCACCTGCATGTaGGTCTTTCTGCTTATTGGG +
Preference number: 5 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNSGTCM*VFLLIG
Trigger: CCCAATAAGCAGAAAGACCAACATGCAGGTGCCAGA...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACCAGAGAGTTCAGCTGTaGCCCAGTAGAAGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNQRVQL*PSRSFS
Trigger: ACTGAAGCTTCTACTGGGCAACAGCTGAACTCTCTG...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATGCAGGCAATAATGGGTaGATGTGTTGCAACTTCTGG +
Preference number: 5 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHAGNNG*MCCNFW
Trigger: CCAGAAGTTGCAACACATCAACCCATTATTGCCTGC...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGATTACAAGGGAAGTATaGCTGGGCAGCTGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMITREV*LGSWRS
Trigger: GCTCCTCCAGCTGCCCAGCAATACTTCCCTTGTAAT...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAATCAGCCATCGTTCTCTaGACAGCGTTGTCTGACCAG +
Preference number: 5 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKSAIVL*TALSDQ
Trigger: CTGGTCAGACAACGCTGTCAAGAGAACGATGGCTGA...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CCATACAGGATTAACGCTGTGCCTTACGTTAGAGCAACAAACTTGACTGTCCGTTCCATTCACACATTTTaGCTGCTGAAGCCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: PYRINAVPYVRATNLTVRSIHTF*LLKPRS
Trigger: AGAACGAGGCTTCAGCAGCAAAAATGTGTGAATGGA...ACGGACAGTCAAGTTTGTTGCTCTAACGTAAGGCACAGCGTTAATCCTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATAAAACCTACCTGCAGTaGTACGAGGCTGTTACTGGA +
Preference number: 5 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHKTYLQ*YEAVTG
Trigger: TCCAGTAACAGCCTCGTACAACTGCAGGTAGGTTTT...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS TCA 90 bp ATCATCTTCATAACTCCTCTTGTGGCGACTAGGAGTGTAGGATGTTaGGGGACTGACTCGAGCTTGGTTTGCATTAACATAGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: IIFITPLVATRSVGC*GTDSSLVCINIGFF
Trigger: AAAGAAGCCTATGTTAATGCAAACCAAGCTCGAGTCAGTCCCTCAACATCCTACACTCCTAGTCGCCACAAGAGGAGTTATGAAGATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000495407.1
CDS CCA 90 bp ATTCCCCAGGCACCGGAACACAATAGAAAGTCTGTCTTTCCAAAGTaGTATTTCGTGGAGAGTTTAAATCAAGTTCTTGTTGAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: IPQAPEHNRKSVFPK*YFVESLNQVLVEAH
Trigger: GTGGGCCTCAACAAGAACTTGATTTAAACTCTCCACGAAATACCACTTTGGAAAGACAGACTTTCTATTGTGTTCCGGTGCCTGGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS-3UTR CAA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAAGGGACTGACTCGAGCTaGGTTTGCATTAACATAGGC +
Preference number: 5 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKGTDSS*VCINIG
Trigger: GCCTATGTTAATGCAAACCAAGCTCGAGTCAGTCCC...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCCAGAGAGTTCAGCTGTaGCCCAGTAGAAGCTTCAGT +
Preference number: 5 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAQRVQL*PSRSFS
Trigger: ACTGAAGCTTCTACTGGGCAACAGCTGAACTCTCTG...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ACAAAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACGCAGGCAATAATGGGTaGATGTGTTGCAACTTCTGG +
Preference number: 5 (lower is better)
Translates to: TKVWEPLPCTSLVLQAVNAGNNG*MCCNFW
Trigger: CCAGAAGTTGCAACACATCAACCCATTATTGCCTGC...GTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGTGTACTCCTCCATGTTaGGTGGAATTAGCTGGGGCT +
Preference number: 5 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMCTPPC*VELAGA
Trigger: AGCCCCAGCTAATTCCACCAAACATGGAGGAGTACA...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ACAGTCTGGCCTATGACTCAGCTGAAGCTAAGGAAATGGTACAATCAGCAACATTCCATTCACACATTTTaGCTGCTGAAGCCTCGTTCT +
Preference number: 5 (lower is better)
Translates to: TVWPMTQLKLRKWYNQQHSIHTF*LLKPRS
Trigger: AGAACGAGGCTTCAGCAGCAAAAATGTGTGAATGGA...ATGTTGCTGATTGTACCATTTCCTTAGCTTCAGCTGAGTCATAGGCCAGACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS GCA 90 bp CATCAGATATGCTATATTCCAAGAATCTCAAAAGAGTTAGATAAATaGGGAATTTGTTCAGCACGGAAGGCAGCACCGCTGAGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: HQICYIPRISKELDK*GICSARKAAPLREG
Trigger: GCCTTCTCTCAGCGGTGCTGCCTTCCGTGCTGAACAAATTCCGCATTTATCTAACTCTTTTGAGATTCTTGGAATATAGCATATCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS CCA 90 bp ATTCCCCAGGCACCGGAACACAATAGAAAGTCTGTCTTTCCAAAGTaGTATTTCGTGGAGAGTTTAAATCAAGTTCTTGTTGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: IPQAPEHNRKSVFPK*YFVESLNQVLVEAV
Trigger: CACAGCCTCAACAAGAACTTGATTTAAACTCTCCACGAAATACCACTTTGGAAAGACAGACTTTCTATTGTGTTCCGGTGCCTGGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495407.1
CDS-3UTR CAA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAATGGTCTTTCTGCTTATaGGGCTGTAGGTCCATATCG +
Preference number: 5 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKWSFCL*GCRSIS
Trigger: CGATATGGACCTACAGCCCAATAAGCAGAAAGACCA...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGTGGTCTTTCTGCTTATaGGGCTGTAGGTCCATATCG +
Preference number: 5 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMWSFCL*GCRSIS
Trigger: CGATATGGACCTACAGCCCAATAAGCAGAAAGACCA...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGTTATGTGGCTACAGTTaGCCCATTACTCTTCATAGG +
Preference number: 5 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKLCGYS*PITLHR
Trigger: CCTATGAAGAGTAATGGGCAAACTGTAGCCACATAA...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTGCTGATCTAACATACTaGGAACCAACTGATGATCCC +
Preference number: 5 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCADLTY*EPTDDP
Trigger: GGGATCATCAGTTGGTTCCAAGTATGTTAGATCAGC...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCAAAACCTACCTGCAGTaGTACGAGGCTGTTACTGGA +
Preference number: 5 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITKTYLQ*YEAVTG
Trigger: TCCAGTAACAGCCTCGTACAACTGCAGGTAGGTTTT...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp TGTCCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTCAGTTTCTAAACGTTTaGGCTCTCCACACCATTGAA +
Preference number: 5 (lower is better)
Translates to: CPNLSEDSGCHNHATTVCQFLNV*ALHTIE
Trigger: TTCAATGGTGTGGAGAGCCAAAACGTTTAGAAACTG...ACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGACGATTCCTCTGACTTaGAAACTGCAACAACCTTCT +
Preference number: 5 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQTIPLT*KLQQPS
Trigger: AGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGT...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTAGACAATGTAGTGTCTaGGTTTCTTTTGCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCRQCSV*VSFAPK
Trigger: TTTGGGGGCAAAAGAAACCAAGACACTACATTGTCT...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ACCACTGACAGCTTAAAAAGTAATGTCCTAACCTTTCTGAAGATTCTGGTTGCCGCTGATCTAACATACTaGGAACCAACTGATGATCCC +
Preference number: 5 (lower is better)
Translates to: TTDSLKSNVLTFLKILVAADLTY*EPTDDP
Trigger: GGGATCATCAGTTGGTTCCAAGTATGTTAGATCAGC...GGCAACCAGAATCTTCAGAAAGGTTAGGACATTACTTTTTAAGCTGTCAGTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAATTATGTGGCTACAGTTaGCCCATTACTCTTCATAGG +
Preference number: 5 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKLCGYS*PITLHR
Trigger: CCTATGAAGAGTAATGGGCAAACTGTAGCCACATAA...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp GTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAGAATTTCATGTAGTCATGACGATTCCTCTGACTTaGAAACTGCAACAACCTTCT +
Preference number: 5 (lower is better)
Translates to: VSVAKHLGNDSTEFHVVMTIPLT*KLQQPS
Trigger: AGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGT...CATGACTACATGAAATTCTGTACTGTCATTTCCCAGATGTTTGGCCACAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CCACACAGATCACATGGGATGGTGAATCTTCTTACTCATGAAAAACAGCCCAAGGTTAGAGCAACAAACTaGACTGTCCGTGTATATATA +
Preference number: 5 (lower is better)
Translates to: PHRSHGMVNLLTHEKQPKVRATN*TVRVYI
Trigger: TATATATACACGGACAGTCAAGTTTGTTGCTCTAAC...CTTGGGCTGTTTTTCATGAGTAAGAAGATTCACCATCCCATGTGATCTGTGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp ATCCGAAGCACGATTCCTCTGACTTTGAAACTGCAACAACCTTCTTCATTTCAGTGCTGGAACAAGATGTaGAATAATTCGATACAAGTG +
Preference number: 5 (lower is better)
Translates to: IRSTIPLTLKLQQPSSFQCWNKM*NNSIQV
Trigger: CACTTGTATCGAATTATTCAACATCTTGTTCCAGCA...CTGAAATGAAGAAGGTTGTTGCAGTTTCAAAGTCAGAGGAATCGTGCTTCGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp AATGTTAAGTGGGAAAAAGTTTCTGTGGCCAAACATCTGGGAAATGACAGTACAAGACAATGTAGTGTCTaGGTTTCTTTTGCCCCCAAA +
Preference number: 5 (lower is better)
Translates to: NVKWEKVSVAKHLGNDSTRQCSV*VSFAPK
Trigger: TTTGGGGGCAAAAGAAACCAAGACACTACATTGTCT...TGTACTGTCATTTCCCAGATGTTTGGCCACAGAAACTTTTTCCCACTTAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp CCTAACCTTTCTGAAGATTCTGGTTGCCATAACCATGCTACTACAGTCTGTTGTGTTAGAGCAACAAACTaGACTGTCCGTGTATATATA +
Preference number: 5 (lower is better)
Translates to: PNLSEDSGCHNHATTVCCVRATN*TVRVYI
Trigger: TATATATACACGGACAGTCAAGTTTGTTGCTCTAAC...ACAACAGACTGTAGTAGCATGGTTATGGCAACCAGAATCTTCAGAAAGGTTAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp GGTGTTACCAGGCTTGATTTCAGGAAATGTCACTGGTTTGTGATAGAAATTACCCTTGAAACAAAGGTTTaGCTCTCCTCTTTGTTAAGG +
Preference number: 5 (lower is better)
Translates to: GVTRLDFRKCHWFVIEITLETKV*LSSLLR
Trigger: CCTTAACAAAGAGGAGAGCAAAACCTTTGTTTCAAG...GGTAATTTCTATCACAAACCAGTGACATTTCCTGAAATCAAGCCTGGTAACACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369077.4
CDS-3UTR CAA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAATGCTGGAACAAGATGTaGAATAATTCGATACAAGTG +
Preference number: 5 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKCWNKM*NNSIQV
Trigger: CACTTGTATCGAATTATTCAACATCTTGTTCCAGCA...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS-3UTR CAA 90 bp AAAGTCTGGGAACCACTGCCATGTACAAGTTTAGTTTTGCAGGCTGTTAACAAATCATCTTCAACTGCCTaGGTTATTTCATCAGATATG +
Preference number: 5 (lower is better)
Translates to: KVWEPLPCTSLVLQAVNKSSSTA*VISSDM
Trigger: CATATCTGATGAAATAACCAAGGCAGTTGAAGATGA...TTTGTTAACAGCCTGCAAAACTAAACTTGTACATGGCAGTGGTTCCCAGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS TCA 90 bp ATATTCTTAGAGTCTAACTCTTGGCTTATCCAAACCTTAGGAAACTaGTTTATCAAACCCCAATATCAGTCCGTTAATTCACAACAGAAG +
Preference number: 5 (lower is better)
Translates to: IFLESNSWLIQTLGN*FIKPQYQSVNSQQK
Trigger: CTTCTGTTGTGAATTAACGGACTGATATTGGGGTTTGATAAATCAGTTTCCTAAGGTTTGGATAAGCCAAGAGTTAGACTCTAAGAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495407.1
CDS GCA 72 bp CGAGGGGCGGGCGCTCTAAACGCTCCGGGCCCGGCCTaGGCCCTGGTTGCGAACACCGGGTCGGCGTCTGTC +
Preference number: 6 (lower is better)
Translates to: RGAGALNAPGPA*ALVANTGSASV
Trigger: GACAGACGCCGACCCGGTGTTCGCAACCAGGGCGCAGGCCGGGCCCGGAGCGTTTAGAGCGCCCGCCCCTCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS CCA 72 bp TGCGCCCTGGTTGCGAACACCGGGTCGGCGTCTGTCTaGAAGCTGGCAGCCGCCGTCGGGGAGCGGTGCGAG +
Preference number: 6 (lower is better)
Translates to: CALVANTGSASV*KLAAAVGERCE
Trigger: CTCGCACCGCTCCCCGACGGCGGCTGCCAGCTTCCAGACAGACGCCGACCCGGTGTTCGCAACCAGGGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS GCA 72 bp TCTGTCTGGAAGCTGGCAGCCGCCGTCGGGGAGCGGTaGGAGGCTCCTGCACTGCGCGCCGCTAGGATACCC +
Preference number: 6 (lower is better)
Translates to: SVWKLAAAVGER*EAPALRAARIP
Trigger: GGGTATCCTAGCGGCGCGCAGTGCAGGAGCCTCGCACCGCTCCCCGACGGCGGCTGCCAGCTTCCAGACAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS GCA 72 bp CAGCCGCCGTCGGGGAGCGGTGCGAGGCTCCTGCACTaGGCGCCGCTAGGATACCCTGGAGAAGGAAGCTAC +
Preference number: 6 (lower is better)
Translates to: QPPSGSGARLLH*APLGYPGEGSY
Trigger: GTAGCTTCCTTCTCCAGGGTATCCTAGCGGCGCGCAGTGCAGGAGCCTCGCACCGCTCCCCGACGGCGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS TCA 72 bp GGGCGAAGAATCCCTGCACGATTCCCAGCGGGTGGCTaGGCCAATCCTCCCCACACGGCATCTCGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: GRRIPARFPAGG*ANPPHTASRQG
Trigger: CCCCTGGCGAGATGCCGTGTGGGGAGGATTGGCTCAGCCACCCGCTGGGAATCGTGCAGGGATTCTTCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS CCA 72 bp TGCGAGGCTCCTGCACTGCGCGCCGCTAGGATACCCTaGAGAAGGAAGCTACGAAGACCGACTACAGCAGCC +
Preference number: 6 (lower is better)
Translates to: CEAPALRAARIP*RRKLRRPTTAA
Trigger: GGCTGCTGTAGTCGGTCTTCGTAGCTTCCTTCTCCAGGGTATCCTAGCGGCGCGCAGTGCAGGAGCCTCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS CCA 72 bp TTTTGGGCGAAGAATCCCTGCACGATTCCCAGCGGGTaGCTGAGCCAATCCTCCCCACACGGCATCTCGCCA +
Preference number: 6 (lower is better)
Translates to: FWAKNPCTIPSG*LSQSSPHGISP
Trigger: TGGCGAGATGCCGTGTGGGGAGGATTGGCTCAGCCACCCGCTGGGAATCGTGCAGGGATTCTTCGCCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360003.7
ENST00000369077.4
CDS TCA 72 bp GCCATCGTTCTCTTGACAGCGTTGTCTGACCAGCACTaGGAGACAGACACCGAGCCACCACGAGCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: AIVLLTALSDQH*ETDTEPPRAAG
Trigger: ACCAGCTGCTCGTGGTGGCTCGGTGTCTGTCTCTCAGTGCTGGTCAGACAACGCTGTCAAGAGAACGATGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS GCA 72 bp GAGGACTGTGTACTCTCTGCTCCTCTGCTGTGTCTGTaGACTCCATCGGATCCAGCAGTGCAGAGGCATCCC +
Preference number: 6 (lower is better)
Translates to: EDCVLSAPLLCL*TPSDPAVQRHP
Trigger: GGGATGCCTCTGCACTGCTGGATCCGATGGAGTGCACAGACACAGCAGAGGAGCAGAGAGTACACAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
ENST00000495407.1
CDS TCA 72 bp TCCTCCATGTTTGGTGGAATTAGCTGGGGCTGTAAGTaGATCTGGCAGTCTGCCGGGAGGAGTGACCTCCCC +
Preference number: 6 (lower is better)
Translates to: SSMFGGISWGCK*IWQSAGRSDLP
Trigger: GGGGAGGTCACTCCTCCCGGCAGACTGCCAGATTCACTTACAGCCCCAGCTAATTCCACCAAACATGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS TCA 72 bp CCAAGAACCCACCGGAAGGAACCAACTCCGGACACATaGCCACTGAGAACTGTCTTCTCAAGGACCTGGGGG +
Preference number: 6 (lower is better)
Translates to: PRTHRKEPTPDT*PLRTVFSRTWG
Trigger: CCCCCAGGTCCTTGAGAAGACAGTTCTCAGTGGTCATGTGTCCGGAGTTGGTTCCTTCCGGTGGGTTCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS TCA 72 bp CAAGGGAAGTATTGCTGGGCAGCTGGAGGAGCCCACTaGCCAAGCGATTGGCTGTGTAGTCTTTGTGGGGAA +
Preference number: 6 (lower is better)
Translates to: QGKYCWAAGGAH*PSDWLCSLCGE
Trigger: TTCCCCACAAAGACTACACAGCCAATCGCTTGGTCAGTGGGCTCCTCCAGCTGCCCAGCAATACTTCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS TCA 72 bp TTTGCTCTCAGCCATCGTTCTCTTGACAGCGTTGTCTaGCCAGCACTGAGAGACAGACACCGAGCCACCACG +
Preference number: 6 (lower is better)
Translates to: FALSHRSLDSVV*PALRDRHRATT
Trigger: CGTGGTGGCTCGGTGTCTGTCTCTCAGTGCTGGTCAGACAACGCTGTCAAGAGAACGATGGCTGAGAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS TCA 72 bp CCCACCGGAAGGAACCAACTCCGGACACATGACCACTaGGAACTGTCTTCTCAAGGACCTGGGGGTTTGTCT +
Preference number: 6 (lower is better)
Translates to: PTGRNQLRTHDH*ELSSQGPGGLS
Trigger: AGACAAACCCCCAGGTCCTTGAGAAGACAGTTCTCAGTGGTCATGTGTCCGGAGTTGGTTCCTTCCGGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS GCA 72 bp CTCGGCACTAATGAAGCAGGAGGACTGTGTACTCTCTaGTCCTCTGCTGTGTCTGTGCACTCCATCGGATCC +
Preference number: 6 (lower is better)
Translates to: LGTNEAGGLCTL*SSAVSVHSIGS
Trigger: GGATCCGATGGAGTGCACAGACACAGCAGAGGAGCAGAGAGTACACAGTCCTCCTGCTTCATTAGTGCCGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
ENST00000495407.1
CDS TCA 72 bp GAGCCACCACGAGCAGCTGGTGAAGATCATCAGCAGTaGTGCTCTGAGGGTCGTTCTTCCGCATTTCCACAA +
Preference number: 6 (lower is better)
Translates to: EPPRAAGEDHQQ*CSEGRSSAFPQ
Trigger: TTGTGGAAATGCGGAAGAACGACCCTCAGAGCATCACTGCTGATGATCTTCACCAGCTGCTCGTGGTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS TCA 72 bp ATAACTCCTCTTGTGGCGACTAGGAGTGTAGGATGTTaGGGGACTGACTCGAGCCACGTAGATTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: ITPLVATRSVGC*GTDSSHVDSPG
Trigger: GCCTGGGGAATCTACGTGGCTCGAGTCAGTCCCTCAACATCCTACACTCCTAGTCGCCACAAGAGGAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466047.5
CDS CAA 90 bp AAGGCAGCACCGCTGAGAGAAGGCTGTTCATGTACTCCTCCATGTTaGGTGGAATTAGCTGGGGCTGTAAGTGAATCTGGCAGTCTGCCG +
Preference number: 6 (lower is better)
Translates to: KAAPLREGCSCTPPC*VELAGAVSESGSLP
Trigger: CGGCAGACTGCCAGATTCACTTACAGCCCCAGCTAATTCCACCAAACATGGAGGAGTACATGAACAGCCTTCTCTCAGCGGTGCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS CAA 90 bp TGTGGCTACCTTGCTCTCTTACACCACTGTGACTTTCAGGGTCAATaGCGTCTCAATTCGCACGTCTATCCAGAACCTGCGGGGACCACG +
Preference number: 6 (lower is better)
Translates to: CGYLALLHHCDFQGQ*RLNSHVYPEPAGTT
Trigger: CGTGGTCCCCGCAGGTTCTGGATAGACGTGCGAATTGAGACGCAATTGACCCTGAAAGTCACAGTGGTGTAAGAGAGCAAGGTAGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS CAA 90 bp TCAGGATTAACTCCATTTTGGGCACAAAGGTCCGCGGCTTCATTCTaGAAGTCAGTGAGGCCAAGAACCCACCGGAAGGAACCAACTCCG +
Preference number: 6 (lower is better)
Translates to: SGLTPFWAQRSAASF*KSVRPRTHRKEPTP
Trigger: CGGAGTTGGTTCCTTCCGGTGGGTTCTTGGCCTCACTGACTTCAAGAATGAAGCCGCGGACCTTTGTGCCCAAAATGGAGTTAATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS TCA 72 bp AATGCGGAATTTGTTCAGCACGGAAGGCAGCACCGCTaGGAGAAGGCTGTTCATGTACTCCTCCATGTTTGG +
Preference number: 6 (lower is better)
Translates to: NAEFVQHGRQHR*EKAVHVLLHVW
Trigger: CCAAACATGGAGGAGTACATGAACAGCCTTCTCTCAGCGGTGCTGCCTTCCGTGCTGAACAAATTCCGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS TCA 72 bp CAGTCCCTGTGGCTACCTTGCTCTCTTACACCACTGTaGCTTTCAGGGTCAATTGCGTCTCAATTCGCACGT +
Preference number: 6 (lower is better)
Translates to: QSLWLPCSLTPL*LSGSIASQFAR
Trigger: ACGTGCGAATTGAGACGCAATTGACCCTGAAAGTCACAGTGGTGTAAGAGAGCAAGGTAGCCACAGGGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS CCA 72 bp GGGGTTTGTCTCTTGAATTGCAAGCCTTCAAGGAGGTaGTTCTCATTCTCATTCCCAGTCCCTGTGGCTACC +
Preference number: 6 (lower is better)
Translates to: GVCLLNCKPSRR*FSFSFPVPVAT
Trigger: GGTAGCCACAGGGACTGGGAATGAGAATGAGAACCACCTCCTTGAAGGCTTGCAATTCAAGAGACAAACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS CAA 72 bp CCGCTGAGAGAAGGCTGTTCATGTACTCCTCCATGTTaGGTGGAATTAGCTGGGGCTGTAAGTGAATCTGGC +
Preference number: 6 (lower is better)
Translates to: PLREGCSCTPPC*VELAGAVSESG
Trigger: GCCAGATTCACTTACAGCCCCAGCTAATTCCACCAAACATGGAGGAGTACATGAACAGCCTTCTCTCAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS TCA 72 bp GCTTCAGTTTCTAAACGTTTTGGCTCTCCACACCATTaGAGACCACCAACACTCCCTGCTTGTCTGGCACCT +
Preference number: 6 (lower is better)
Translates to: ASVSKRFGSPHH*RPPTLPACLAP
Trigger: AGGTGCCAGACAAGCAGGGAGTGTTGGTGGTCTTCAATGGTGTGGAGAGCCAAAACGTTTAGAAACTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
ENST00000495407.1
CDS TCA 72 bp AGGTATTCAGCAGCCAAACTATCCCCCAGAAGGGCATaGGTAAGGAACCCAAGAAGTTCTGCTCTGACTGGA +
Preference number: 6 (lower is better)
Translates to: RYSAAKLSPRRA*VRNPRSSALTG
Trigger: TCCAGTCAGAGCAGAACTTCTTGGGTTCCTTACTCATGCCCTTCTGGGGGATAGTTTGGCTGCTGAATACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS GCA 72 bp TTGCTCTCTTACACCACTGTGACTTTCAGGGTCAATTaGGTCTCAATTCGCACGTCTATCCAGAACCTGCGG +
Preference number: 6 (lower is better)
Translates to: LLSYTTVTFRVN*VSIRTSIQNLR
Trigger: CCGCAGGTTCTGGATAGACGTGCGAATTGAGACGCAATTGACCCTGAAAGTCACAGTGGTGTAAGAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS CAA 72 bp CTTGCTCTCTTACACCACTGTGACTTTCAGGGTCAATaGCGTCTCAATTCGCACGTCTATCCAGAACCTGCG +
Preference number: 6 (lower is better)
Translates to: LALLHHCDFQGQ*RLNSHVYPEPA
Trigger: CGCAGGTTCTGGATAGACGTGCGAATTGAGACGCAATTGACCCTGAAAGTCACAGTGGTGTAAGAGAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS GCA 72 bp CTCTGCTGTGTCTGTGCACTCCATCGGATCCAGCAGTaGAGAGGCATCCCTTTCATCATTATTCAGTATACT +
Preference number: 6 (lower is better)
Translates to: LCCVCALHRIQQ*RGIPFIIIQYT
Trigger: AGTATACTGAATAATGATGAAAGGGATGCCTCTGCACTGCTGGATCCGATGGAGTGCACAGACACAGCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
ENST00000495407.1
CDS CAA 72 bp GCTGAAGCCTCGTTCTTCTTAAAGACTCTAGCTGCTTaGCTCTCAGCCATCGTTCTCTTGACAGCGTTGTCT +
Preference number: 6 (lower is better)
Translates to: AEASFFLKTLAA*LSAIVLLTALS
Trigger: AGACAACGCTGTCAAGAGAACGATGGCTGAGAGCAAAGCAGCTAGAGTCTTTAAGAAGAACGAGGCTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS CAA 72 bp GAGAACTGTCTTCTCAAGGACCTGGGGGTTTGTCTCTaGAATTGCAAGCCTTCAAGGAGGTGGTTCTCATTC +
Preference number: 6 (lower is better)
Translates to: ENCLLKDLGVCL*NCKPSRRWFSF
Trigger: GAATGAGAACCACCTCCTTGAAGGCTTGCAATTCAAGAGACAAACCCCCAGGTCCTTGAGAAGACAGTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS CAA 90 bp ATTTTTGCTGCTGAAGCCTCGTTCTTCTTAAAGACTCTAGCTGCTTaGCTCTCAGCCATCGTTCTCTTGACAGCGTTGTCTGACCAGCAC +
Preference number: 6 (lower is better)
Translates to: IFAAEASFFLKTLAA*LSAIVLLTALSDQH
Trigger: GTGCTGGTCAGACAACGCTGTCAAGAGAACGATGGCTGAGAGCAAAGCAGCTAGAGTCTTTAAGAAGAACGAGGCTTCAGCAGCAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS TCA 72 bp GGGTTGATGTGTTGCAACTTCTGGGCTAAGATCACATaGATTCTCGGCACTAATGAAGCAGGAGGACTGTGT +
Preference number: 6 (lower is better)
Translates to: GLMCCNFWAKIT*ILGTNEAGGLC
Trigger: ACACAGTCCTCCTGCTTCATTAGTGCCGAGAATTCATGTGATCTTAGCCCAGAAGTTGCAACACATCAACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
ENST00000495407.1
CDS TCA 72 bp GCAGCTCTGGACACACTGAGGCTAACAGTCGATAGTTaGCTAGGCTGTAACACTTACACTTACAGGTTTTGC +
Preference number: 6 (lower is better)
Translates to: AALDTLRLTVDS*LGCNTYTYRFC
Trigger: GCAAAACCTGTAAGTGTAAGTGTTACAGCCTAGTCAACTATCGACTGTTAGCCTCAGTGTGTCCAGAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495407.1
CDS TCA 72 bp AGAACTGTCTTCTCAAGGACCTGGGGGTTTGTCTCTTaGATTGCAAGCCTTCAAGGAGGTGGTTCTCATTCT +
Preference number: 6 (lower is better)
Translates to: RTVFSRTWGFVS*IASLQGGGSHS
Trigger: AGAATGAGAACCACCTCCTTGAAGGCTTGCAATTCAAGAGACAAACCCCCAGGTCCTTGAGAAGACAGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS CAA 72 bp CTGTCTTCTCAAGGACCTGGGGGTTTGTCTCTTGAATaGCAAGCCTTCAAGGAGGTGGTTCTCATTCTCATT +
Preference number: 6 (lower is better)
Translates to: LSSQGPGGLSLE*QAFKEVVLILI
Trigger: AATGAGAATGAGAACCACCTCCTTGAAGGCTTGCAATTCAAGAGACAAACCCCCAGGTCCTTGAGAAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569515.1
CDS TCA 72 bp ATAACTCCTCTTGTGGCGACTAGGAGTGTAGGATGTTaGGGGACTGACTCGAGCTTGGTTTGCATTAACATA +
Preference number: 6 (lower is better)
Translates to: ITPLVATRSVGC*GTDSSLVCINI
Trigger: TATGTTAATGCAAACCAAGCTCGAGTCAGTCCCTCAACATCCTACACTCCTAGTCGCCACAAGAGGAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000495407.1
CDS GCA 72 bp TGCTATATTCCAAGAATCTCAAAAGAGTTAGATAAATaGGGAATTTGTTCAGCACGGAAGGCAGCACCGCTG +
Preference number: 6 (lower is better)
Translates to: CYIPRISKELDK*GICSARKAAPL
Trigger: CAGCGGTGCTGCCTTCCGTGCTGAACAAATTCCGCATTTATCTAACTCTTTTGAGATTCTTGGAATATAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
CDS CAA 90 bp TCGGACATGAAACTTGAAACAAACTTACAGGTTTTGCTCTCCTCTTaGTTAAGGCAGGCAGGCAATAATGGGTTGATGTGTTGCAACTTC +
Preference number: 6 (lower is better)
Translates to: SDMKLETNLQVLLSS*LRQAGNNGLMCCNF
Trigger: GAAGTTGCAACACATCAACCCATTATTGCCTGCCTGCCTTAACAAAGAGGAGAGCAAAACCTGTAAGTTTGTTTCAAGTTTCATGTCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360003.7
CDS TCA 72 bp GAGAGAGAGATTACTGAAAACACTTATTGTGAGGAATaGAGACCTGACTCTCAATTCCACTATGAGCACGTT +
Preference number: 6 (lower is better)
Translates to: EREITENTYCEE*RPDSQFHYEHV
Trigger: AACGTGCTCATAGTGGAATTGAGAGTCAGGTCTTCATTCCTCACAATAAGTGTTTTCAGTAATCTCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495407.1
CDS CCA 72 bp GCACCGGAACACAATAGAAAGTCTGTCTTTCCAAAGTaGTATTTCGTGGAGAGTTTAAATCAAGTTCTTGTT +
Preference number: 6 (lower is better)
Translates to: APEHNRKSVFPK*YFVESLNQVLV
Trigger: AACAAGAACTTGATTTAAACTCTCCACGAAATACCACTTTGGAAAGACAGACTTTCTATTGTGTTCCGGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5
ENST00000495407.1
CDS CAA 72 bp AGTCATCTGCAGACGAAAAGATGCTGGAACAAGATGTaGAATAATTCGATACAAGTGTTCTGTGAAGGTACT +
Preference number: 6 (lower is better)
Translates to: SHLQTKRCWNKM*NNSIQVFCEGT
Trigger: AGTACCTTCACAGAACACTTGTATCGAATTATTCAACATCTTGTTCCAGCATCTTTTCGTCTGCAGATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360003.7
ENST00000369077.4
ENST00000466047.5