RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCM9 (Homo sapiens)

Ensembl gene IDs: ENSG00000111877

Ensembl transcript IDs: ENST00000316068.7, ENST00000316316.10, ENST00000368478.2, ENST00000425154.6, ENST00000436788.2, ENST00000458674.2, ENST00000505446.1, ENST00000505485.1, ENST00000619706.5

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGAAAGGACAACTCAGAAGGTCAGTACTTCAGAAAGGTACTGTTTaGCCAGTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGAT +
Preference number: 1 (lower is better)
Translates to: KKGQLRRSVLQKGTV*PVARSLRTSWNCKD
Trigger: ATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCACTGGTCAAACAGTACCTTTCTGAAGTACTGACCTTCTGAGTTGTCCTTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR TCA 90 bp CATGAAAATGCCTTAAGCTCTATACCATCTATCTACTTGGTAAAGTaGAATATCCCCCTCTTTAGTTTAACATTCCAGTTGCTGAGTCTT +
Preference number: 1 (lower is better)
Translates to: HENALSSIPSIYLVK*NIPLFSLTFQLLSL
Trigger: AAGACTCAGCAACTGGAATGTTAAACTAAAGAGGGGGATATTTCACTTTACCAAGTAGATAGATGGTATAGAGCTTAAGGCATTTTCATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316068.7
3UTR-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACACCATATTGATATCCTaGAGGTCCTCTGTGGAGTTG +
Preference number: 2 (lower is better)
Translates to: AIILPQPPRVARTTGVSHTILIS*RSSVEL
Trigger: CAACTCCACAGAGGACCTTCAGGATATCAATATGGT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTTAATTCAGCTCAGCTaGTGGTATCACACTGACCTC +
Preference number: 2 (lower is better)
Translates to: AIILPQPPRVARTTGVSHLIQLS*WYHTDL
Trigger: GAGGTCAGTGTGATACCAGCAGCTGAGCTGAATTAA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTCTCTAAGAACATCATaGAATTGTAAGGATACCTCT +
Preference number: 2 (lower is better)
Translates to: AIILPQPPRVARTTGVSHSLRTS*NCKDTS
Trigger: AGAGGTATCCTTACAATTCCATGATGTTCTTAGAGA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGAAGAAGGTGAGATTTaGCCAGAAAGCTTTTCCCAA +
Preference number: 2 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKEEGEI*PESFSQ
Trigger: TTGGGAAAAGCTTTCTGGTCAAATCTCACCTTCTTC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGAGCCAGTATTCAGAGTaGTCCTCAATATGGCCAATT +
Preference number: 2 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSQYSE*SSIWPI
Trigger: AATTGGCCATATTGAGGATCACTCTGAATACTGGCT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCTGCTGGTATCACACTaGCCTCAACTGATTATACAA +
Preference number: 2 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKLLVSH*PQLIIQ
Trigger: TTGTATAATCAGTTGAGGTCAGTGTGATACCAGCAG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTATTCAGCTCAGCTGCTaGTATCACACTGACCTCAAC +
Preference number: 2 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGIQLSC*YHTDLN
Trigger: GTTGAGGTCAGTGTGATACCAGCAGCTGAGCTGAAT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGAAGAAGGTGAGATTTaGCCAGAAAGCTTTTCCCAA +
Preference number: 2 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGEEGEI*PESFSQ
Trigger: TTGGGAAAAGCTTTCTGGTCAAATCTCACCTTCTTC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR TCA 72 bp CAACTCAGAAGGTCAGTACTTCAGAAAGGTACTGTTTaGCCAGTGGCCAGATCTCTAAGAACATCATGGAAT +
Preference number: 3 (lower is better)
Translates to: QLRRSVLQKGTV*PVARSLRTSWN
Trigger: ATTCCATGATGTTCTTAGAGATCTGGCCACTGGTCAAACAGTACCTTTCTGAAGTACTGACCTTCTGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR TCA 72 bp GCCTTAAGCTCTATACCATCTATCTACTTGGTAAAGTaGAATATCCCCCTCTTTAGTTTAACATTCCAGTTG +
Preference number: 3 (lower is better)
Translates to: ALSSIPSIYLVK*NIPLFSLTFQL
Trigger: CAACTGGAATGTTAAACTAAAGAGGGGGATATTTCACTTTACCAAGTAGATAGATGGTATAGAGCTTAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGCGCAAGAAGGCTGGTaGGGCGGAGTGCGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHAQEGW*GGVRAC
Trigger: GCACGCGCGCACTCCGCCTCACCAGCCTTCTTGCGC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCCGCCTCAACTTCCCTaGCCCGGCGGCTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHPPQLP*PGGSSG
Trigger: TCCGGAAGAGCCGCCGGGGCAGGGAAGTTGAGGCGG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGGCTTCCCTCGGGGCTaGCTCCAGGAGAGAAGATAT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHGFPRG*LQERRY
Trigger: ATATCTTCTCTCCTGGAGGCAGCCCCGAGGGAAGCC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGGTCGTACTGGCCTTTaGGGTTCGTTGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHGRTGL*GSLLPG
Trigger: TCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTTTCCAACAGCCGAATaGTGGTCCGGGCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHFPTAE*WSGQRS
Trigger: GGAACGCTGCCCGGACCACCATTCGGCTGTTGGAAA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGTCTCACCCTGTGGCTaGCTGGAGATCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHVSPCG*LEIWFP
Trigger: AGGAAACCAGATCTCCAGTCAGCCACAGGGTGAGAC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTCTGGGCCCTCTCTTTaGACAGCTTCTGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHSGPSL*TASAGS
Trigger: GGAACCTGCAGAAGCTGTGCAAAGAGAGGGCCCAGA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGCAGGCTCTTCCACTTaGGCAAGGGATTTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHAGSST*ARDFGL
Trigger: GAGACCGAAATCCCTTGCGCAAGTGGAAGAGCCTGC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGCGCAAGAAGGCTGGTaGGGCGGAGTGCGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANAQEGW*GGVRAC
Trigger: GCACGCGCGCACTCCGCCTCACCAGCCTTCTTGCGC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACACCTGTCTCTCCTGGTaGTGGAAGCAACCCAATGTC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHTCLSW*WKQPNV
Trigger: GACATTGGGTTGCTTCCATCACCAGGAGAGACAGGT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGACTTAAGAGTGGGCTaGCGAGGGCAATGTTCACAG +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHDLRVG*RGQCSQ
Trigger: CTGTGAACATTGCCCTCGGCAGCCCACTCTTAAGTC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACACCCAATGTCCACTTTaGTCCTTTGGCCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHTQCPL*SFGLAH
Trigger: GTGAGCCAGGCCAAAGGAGCAAAGTGGACATTGGGT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCCAATCTGGCTAATGTaGAGGCATGAACCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHPIWLM*RHEPCR
Trigger: GCGGCAAGGTTCATGCCTGCACATTAGCCAGATTGG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCACCAGCCAGCACCATaGCCACAGCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHHQPAP*PQQALL
Trigger: TAGTAAAGCTTGCTGTGGCCATGGTGCTGGCTGGTG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCAGGCTGGAATACAGTaGTGTGACCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHQAGIQ*CDHSSL
Trigger: CAGTGAGCTGTGGTCACACCACTGTATTCCAGCCTG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGAGAATTGTCAAGGCTaGCCTTCGCAGTGCACTATC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHENCQG*PSQCTI
Trigger: GATAGTGCACTGCGAAGGTCAGCCTTGACAATTCTC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGGTGACACATGGCTGTaGTCTTCAAAGGAGTGGATC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHGDTWL*SSKEWI
Trigger: GATCCACTCCTTTGAAGATCACAGCCATGTGTCACC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGCTGGTGAGGCGGAGTaGGCGCGTGCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKAGEAE*ARARGR
Trigger: GCGGCCACGTGCACGCGCGCACTCCGCCTCACCAGC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTTTCTGCACAACTTCTaGGCCCTCTCTTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHFLHNF*ALSLHS
Trigger: GCTGTGCAAAGAGAGGGCCCAGAAGTTGTGCAGAAA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACACTGTGCAGGCACCCTaGTGCTATTTCTGCACAACT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHTVQAP*CYFCTT
Trigger: AGTTGTGCAGAAATAGCACCAGGGTGCCTGCACAGT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCTTTGTCTCACCCTGTaGCTGACTGGAGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHLCLTL*LTGDLV
Trigger: AACCAGATCTCCAGTCAGCCACAGGGTGAGACAAAG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCATCACCTTCTCTCTTaGTCCGTGTTTCTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHHHLLS*SVFLWW
Trigger: CCACCAGAGAAACACGGACCAAGAGAGAAGGTGATG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGCTCAAAGTCAGCCTTaGTCACAAACACATGCTTGC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHAQSQP*SQTHAC
Trigger: GCAAGCATGTGTTTGTGATCAAGGCTGACTTTGAGC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGCTCCAGAGCTTCTCTaGTTTGCTTGGGTAACCTTT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHAPELL*FAWVTF
Trigger: AAAGGTTACCCAAGCAAATCAGAGAAGCTCTGGAGC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTCTCTTTCTTTTGGGTaGGTCCAGCATTCTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHSLSFG*VQHSVW
Trigger: CCAGACAGAATGCTGGACTCACCCAAAAGAAAGAGA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCAGAAAGGTACTGTTTaGCCAGTGGCCAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHQKGTV*PVARSL
Trigger: TAGAGATCTGGCCACTGGTCAAACAGTACCTTTCTG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTCACTCAAGAGGCTCTaGAGCTCTAGCTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHSLKRL*SSSFSR
Trigger: TCTGGAAAAGCTAGAGCTGCAGAGCCTCTTGAGTGA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTGCAGGCATGAACCTTaGCGCTTTTATTACTGCCTG +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHCRHEP*RFYYCL
Trigger: CAGGCAGTAATAAAAGCGGCAAGGTTCATGCCTGCA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCCAACAGCCGAATGGTaGTCCGGGCAGCGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANPTAEW*SGQRSG
Trigger: GCCGGAACGCTGCCCGGACCACCATTCGGCTGTTGG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TGCCTTAAGCTCTATACCATCTATCTACTTGGTAAAGTGAAATATCCCCCTCTTGCGCAAGAAGGCTGGTaGGGCGGAGTGCGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: CLKLYTIYLLGKVKYPPLAQEGW*GGVRAC
Trigger: GCACGCGCGCACTCCGCCTCACCAGCCTTCTTGCGC...AAGAGGGGGATATTTCACTTTACCAAGTAGATAGATGGTATAGAGCTTAAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACACAGACAGGCAAACCTaGTATCCTGGCATGAAGATT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHTDRQT*YPGMKI
Trigger: AATCTTCATGCCAGGATATCAGGTTTGCCTGTCTGT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGAATCACTGTCCCAGTaGCAGATAAAAAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHESLSQ*QIKSVP
Trigger: TGGGACACTTTTTATCTGTCACTGGGACAGTGATTC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTACATTCCAAACACTTaGGGGCACAAGCTAGCCAAT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHYIPNT*GHKLAN
Trigger: ATTGGCTAGCTTGTGCCCTCAAGTGTTTGGAATGTA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCGCTGGTGAGGCGGAGTaGGCGCGTGCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: SYISKPETSLTVFHLYRTAGEAE*ARARGR
Trigger: GCGGCCACGTGCACGCGCGCACTCCGCCTCACCAGC...GGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGCTGGTGAGGCGGAGTaGGCGCGTGCACGTGGCCGC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGAGEAE*ARARGR
Trigger: GCGGCCACGTGCACGCGCGCACTCCGCCTCACCAGC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCCGCCTCAACTTCCCTaGCCCGGCGGCTCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKPPQLP*PGGSSG
Trigger: TCCGGAAGAGCCGCCGGGGCAGGGAAGTTGAGGCGG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACAGTTACCGTCAGACCTaGACTAGTAGATCCAATTCC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHSYRQT*TSRSNS
Trigger: GGAATTGGATCTACTAGTGCAGGTCTGACGGTAACT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGGTTTGTTGCTCCATTaGTTCATGGATACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHGLLLH*FMDTGP
Trigger: AGGACCAGTATCCATGAAGCAATGGAGCAACAAACC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCACAGCTCTCCAAGCTaGGACACGAGGATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANHSSPS*DTRMAG
Trigger: GCCGGCCATCCTCGTGTCCCAGCTTGGAGAGCTGTG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTGCTCCATTGCTTCATaGATACTGGTCCTATCATGC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHCSIAS*ILVLSC
Trigger: GCATGATAGGACCAGTATCCATGAAGCAATGGAGCA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACATCCATGATGATCCCTaGGGACTGCTCATTATTTAC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHIHDDP*GLLIIY
Trigger: GTAAATAATGAGCAGTCCTCAGGGATCATCATGGAT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTCTTTGCTGCATATTTaGGGAACTGAGATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHSLLHI*GTEISL
Trigger: CAGGGAAATCTCAGTTCCTCAAATATGCAGCAAAGA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGCTGCAGATTCCTTATaGGGCAGAAATAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHAADSL*GRNRFS
Trigger: TGAAAACCTATTTCTGCCTCATAAGGAATCTGCAGC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTGGGTAGATGAGACATaGTGTTTGATTGAGACTACC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHWVDET*CLIETT
Trigger: GGTAGTCTCAATCAAACATCATGTCTCATCTACCCA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTCGCCGGGAACGCGTTaGTCCCGAGGCCGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSPGTR*SRGRRA
Trigger: GGCCCTTCGGCCTCGGGAGCAACGCGTTCCCGGCGA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGATGGGAAGGGACTGTaGACTGTGCAGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANDGKGL*TVQAPW
Trigger: CCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGGCATTAACCACAACTaGGTAATGAGCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHGINHN*VMSIFI
Trigger: GATGAAGATGCTCATTACCCAGTTGTGGTTAATGCC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTCTTCGAATTCCTTTTaGACCTCCTCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHSSNSF*TSSSMM
Trigger: CATCATGGATGAGGAGGTCCAAAAGGAATTCGAAGA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCCAACCAGTGTAACTTaGTCGCTATTCATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHPTSVT*SLFILN
Trigger: ATTCAAGATGAATAGCGATCAAGTTACACTGGTTGG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGACATGATGTTTGATTaGGACTACCACATAGTCTCT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHDMMFD*DYHIVS
Trigger: AGAGACTATGTGGTAGTCTCAATCAAACATCATGTC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTGAGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGTCGCCGGGAACGCGTTaGTCCCGAGGCCGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSYISKPETSLTVFHLYRSPGTR*SRGRRA
Trigger: GGCCCTTCGGCCTCGGGAGCAACGCGTTCCCGGCGA...CCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGGTCATCACCAGATTTaGAACTATCCACTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHGHHQI*NYPLSH
Trigger: ATGACTTAGTGGATAGTTGCAAATCTGGTGATGACC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGCCTTTGGGGTTCGTTaGTGCCAGGATGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANAFGVR*CQDGGP
Trigger: AGGACCACCATCCTGGCAGCAACGAACCCCAAAGGC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCACACAGCTCTCCAAGCTaGGACACGAGGATGGCCGGC +
Preference number: 4 (lower is better)
Translates to: KPETSLTVFHLYRTINWPHSSPS*DTRMAG
Trigger: GCCGGCCATCCTCGTGTCCCAGCTTGGAGAGCTGTG...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATACAGACACGGACTCCTaGGGGTCGTACTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANTDTDS*GSYWPL
Trigger: CAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTTTCTCCAGATGTTTTaGGATGAGGAGACACAACAA +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHFLQMF*DEETQQ
Trigger: TTGTTGTGTCTCCTCATCCCAAAACATCTGGAGAAA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCACCCTGTGGCTGACTaGAGATCTGGTTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANHPVAD*RSGFLG
Trigger: CCCCAGGAAACCAGATCTCCAGTCAGCCACAGGGTG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTGGTCCGTGTTTCTCTaGTGGCTGCTGCGACACCTC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANWSVFL*WLLRHL
Trigger: GAGGTGTCGCAGCAGCCACCAGAGAAACACGGACCA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTGTAGGAGGGGAGCTTaGGCCTCTCTCACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANCRRGA*ASLTSV
Trigger: AACCGAGGTGAGAGAGGCCCAAGCTCCCCTCCTACA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGTCTCACCCTGTGGCTaGCTGGAGATCTGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANVSPCG*LEIWFP
Trigger: AGGAAACCAGATCTCCAGTCAGCCACAGGGTGAGAC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACATGAGACATGATGTTTaGTTGAGACTACCACATAGT +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHMRHDV*LRLPHS
Trigger: ACTATGTGGTAGTCTCAATCAAACATCATGTCTCAT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTACTTGGATGTAATTTaGTTTCAGGACTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: AIILPQPPRVARTTGVSHYLDVI*FQDYLH
Trigger: GTGGAGATAGTCCTGAAAGCAAATTACATCCAAGTA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAGGGACTGTGCACTGTaGAGGCACCCTGGTGCTATT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANRDCAL*RHPGAI
Trigger: AATAGCACCAGGGTGCCTGCACAGTGCACAGTCCCT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGATGGGAAGGGACTGTaGACTGTGCAGGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKDGKGL*TVQAPW
Trigger: CCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGCAGGCTCTTCCACTTaGGCAAGGGATTTCGGTCTC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANAGSST*ARDFGL
Trigger: GAGACCGAAATCCCTTGCGCAAGTGGAAGAGCCTGC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCCAACAGCCGAATGGTaGTCCGGGCAGCGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGPTAEW*SGQRSG
Trigger: GCCGGAACGCTGCCCGGACCACCATTCGGCTGTTGG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTCAGCGCACATCTTGCTaGAAGGGCTTCCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: PETSLTVFHLYRTINWPFQRTSC*KGFHRC
Trigger: GCAACGGTGGAAGCCCTTTCAGCAAGATGTGCGCTG...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCAGCGCACATCTTGCTaGAAGGGCTTCCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKQRTSC*KGFHRC
Trigger: GCAACGGTGGAAGCCCTTTCAGCAAGATGTGCGCTG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTTTGGGGTTCGTTGCTaGCAGGATGGTGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANFGVRC*QDGGPC
Trigger: ACAAGGACCACCATCCTGGCAGCAACGAACCCCAAA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGACTTAAGAGTGGGCTaGCGAGGGCAATGTTCACAG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANDLRVG*RGQCSQ
Trigger: CTGTGAACATTGCCCTCGGCAGCCCACTCTTAAGTC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCCAATCTGGCTAATGTaGAGGCATGAACCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANPIWLM*RHEPCR
Trigger: GCGGCAAGGTTCATGCCTGCACATTAGCCAGATTGG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGCTGGGACACGAGGATaGCCGGCAAAAGGTGTAATA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANAGTRG*PAKGVI
Trigger: TATTACACCTTTTGCCGGCCATCCTCGTGTCCCAGC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCACCAGCCAGCACCATaGCCACAGCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANHQPAP*PQQALL
Trigger: TAGTAAAGCTTGCTGTGGCCATGGTGCTGGCTGGTG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTCCTGGGGGTCGTACTaGCCTTTGGGGTTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSWGSY*PLGFVA
Trigger: AGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGACAGACACGGACTCCTaGGGGTCGTACTGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKTDTDS*GSYWPL
Trigger: CAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTTTCCAACAGCCGAATaGTGGTCCGGGCAGCGTTCC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKFPTAE*WSGQRS
Trigger: GGAACGCTGCCCGGACCACCATTCGGCTGTTGGAAA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTGGTCCGTGTTTCTCTaGTGGCTGCTGCGACACCTC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKWSVFL*WLLRHL
Trigger: GAGGTGTCGCAGCAGCCACCAGAGAAACACGGACCA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCAGGCTGGAATACAGTaGTGTGACCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANQAGIQ*CDHSSL
Trigger: CAGTGAGCTGTGGTCACACCACTGTATTCCAGCCTG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGTTCTGCAGAAACAGTaGCTGTGTCAGAAGTCGCCG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANVLQKQ*LCQKSP
Trigger: CGGCGACTTCTGACACAGCCACTGTTTCTGCAGAAC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619706.5
CDS-3UTR TCA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTGTAGCATCAGTCCTTTaGATCCCACCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PETSLTVFHLYRTINWPFVASVL*IPPAST
Trigger: GGTGCTGGCTGGTGGGATTCAAAGGACTGATGCTAC...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGTAGCATCAGTCCTTTaGATCCCACCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKVASVL*IPPAST
Trigger: GGTGCTGGCTGGTGGGATTCAAAGGACTGATGCTAC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTACCGGAGAAGAACCTaGTTGCCCACATCAGACAGT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANYRRRT*LPTSDS
Trigger: ACTGTCTGATGTGGGCAATCAGGTTCTTCTCCGGTA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTCAGACAGTGTGGGCTaGAGATTCCTTATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANSDSVG*RFLMRQ
Trigger: CTGCCTCATAAGGAATCTGCAGCCCACACTGTCTGA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCACTGTCTCTGGTACTaGTCTCCAGGGTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANHCLWY*SPGFSG
Trigger: TCCTGAAAACCCTGGAGAGCAGTACCAGAGACAGTG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGTGCAGGCACCCTGGTaGTATTTCTGCACAACTTCT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANVQAPW*YFCTTS
Trigger: AGAAGTTGTGCAGAAATAGCACCAGGGTGCCTGCAC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTACCTCCAATACCCGTaGTTGGGATTGGTGCACACT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANYLQYP*LGLVHT
Trigger: AGTGTGCACCAATCCCAACCACGGGTATTGGAGGTA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTTTCTGCACAACTTCTaGGCCCTCTCTTTGCACAGC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANFLHNF*ALSLHS
Trigger: GCTGTGCAAAGAGAGGGCCCAGAAGTTGTGCAGAAA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATACTGTGCAGGCACCCTaGTGCTATTTCTGCACAACT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANTVQAP*CYFCTT
Trigger: AGTTGTGCAGAAATAGCACCAGGGTGCCTGCACAGT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGTCCAGCATTCTGTCTaGGCTATGTACAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANVQHSV*AMYRSG
Trigger: TCCACTCCTGTACATAGCCCAGACAGAATGCTGGAC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCAGCGCACATCTTGCTaGAAGGGCTTCCACCGTTGC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGQRTSC*KGFHRC
Trigger: GCAACGGTGGAAGCCCTTTCAGCAAGATGTGCGCTG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCCAGATGTTTTGGGATaGGGAGACACAACAACAGTG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANPDVLG*GDTTTV
Trigger: CACTGTTGTTGTGTCTCCTCATCCCAAAACATCTGG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCTCTTCTCCTTACCCTaGGATGTGCTGTTAGAGATC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANLFSLP*DVLLEI
Trigger: GATCTCTAACAGCACATCTCAGGGTAAGGAGAAGAG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCCCTCACAAGTAAGATaGGCACACCCAGTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKPSQVR*AHPVSF
Trigger: GAACGAGACTGGGTGTGCTCATCTTACTTGTGAGGG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGAGGAGGAGGGGATTTTaGTTTGGATTCCGATGGGGG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKRRRGF*FGFRWG
Trigger: CCCCCATCGGAATCCAAATCAAAATCCCCTCCTCCT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGTGGACCCACGGAGCTaGAAAGATTTCCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANVDPRS*KDFLLL
Trigger: CAGTAAAAGGAAATCTTTTCAGCTCCGTGGGTCCAC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCAGAAAGGTACTGTTTaGCCAGTGGCCAGATCTCTA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANQKGTV*PVARSL
Trigger: TAGAGATCTGGCCACTGGTCAAACAGTACCTTTCTG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATACTGAGATTTCCCTGTaGCAGGATCCCCAACCAATA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANTEISL*QDPQPI
Trigger: TATTGGTTGGGGATCCTGGCACAGGGAAATCTCAGT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTTTGGGGTTCGTTGCTaGCAGGATGGTGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKFGVRC*QDGGPC
Trigger: ACAAGGACCACCATCCTGGCAGCAACGAACCCCAAA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGCCTTTGGGGTTCGTTaGTGCCAGGATGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGAFGVR*CQDGGP
Trigger: AGGACCACCATCCTGGCAGCAACGAACCCCAAAGGC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTCACTCAAGAGGCTCTaGAGCTCTAGCTTTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANSLKRL*SSSFSR
Trigger: TCTGGAAAAGCTAGAGCTGCAGAGCCTCTTGAGTGA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGGCTTCCCTCGGGGCTaGCTCCAGGAGAGAAGATAT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGGFPRG*LQERRY
Trigger: ATATCTTCTCTCCTGGAGGCAGCCCCGAGGGAAGCC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGACCCAATGTCCACTTTaGTCCTTTGGCCTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKTQCPL*SFGLAH
Trigger: GTGAGCCAGGCCAAAGGAGCAAAGTGGACATTGGGT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCTTCACCGGCAAGGCTaGGTCTCTTCTTGTTCTACG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKLHRQG*VSSCST
Trigger: CGTAGAACAAGAAGAGACGCAGCCTTGCCGGTGAAG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTTCTCTGGTGGCTGCTaGGACACCTCCTTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKFSGGC*DTSFVS
Trigger: TGAGACAAAGGAGGTGTCGCAGCAGCCACCAGAGAA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGGTAATCTCTACACCTaGTTGGAGACGAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANGNLYT*LETKTS
Trigger: GCTTGTCTTCGTCTCCAACCAGGTGTAGAGATTACC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTTGCTGCCAGGATGGTaGTCCTTGTGTTCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKLLPGW*SLCSAC
Trigger: GCAAGCTGAACACAAGGACCACCATCCTGGCAGCAA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTCCTGGGGGTCGTACTaGCCTTTGGGGTTCGTTGCT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSWGSY*PLGFVA
Trigger: AGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAGTTCACACTGTCTCTaGTACTGCTCTCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANSSHCL*YCSPGF
Trigger: AAACCCTGGAGAGCAGTACCAGAGACAGTGTGAACT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGGCCACAGGGGAACCTaGAGGCTTAACATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANGHRGT*RLNIFN
Trigger: ATTGAAAATGTTAAGCCTCCAGGTTCCCCTGTGGCC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCACCCTGTGGCTGACTaGAGATCTGGTTTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGHPVAD*RSGFLG
Trigger: CCCCAGGAAACCAGATCTCCAGTCAGCCACAGGGTG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTGTAGGAGGGGAGCTTaGGCCTCTCTCACCTCGGTT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGCRRGA*ASLTSV
Trigger: AACCGAGGTGAGAGAGGCCCAAGCTCCCCTCCTACA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATATTCAGCTCAGCTGCTaGTATCACACTGACCTCAAC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANIQLSC*YHTDLN
Trigger: GTTGAGGTCAGTGTGATACCAGCAGCTGAGCTGAAT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGAGAATTGTCAAGGCTaGCCTTCGCAGTGCACTATC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKENCQG*PSQCTI
Trigger: GATAGTGCACTGCGAAGGTCAGCCTTGACAATTCTC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATACAGACAGGCAAACCTaGTATCCTGGCATGAAGATT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANTDRQT*YPGMKI
Trigger: AATCTTCATGCCAGGATATCAGGTTTGCCTGTCTGT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGAATCACTGTCCCAGTaGCAGATAAAAAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANESLSQ*QIKSVP
Trigger: TGGGACACTTTTTATCTGTCACTGGGACAGTGATTC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGTAGCATCAGTCCTTTaGATCCCACCAGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGVASVL*IPPAST
Trigger: GGTGCTGGCTGGTGGGATTCAAAGGACTGATGCTAC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCCAACCAATAAAAGATaGGATTCTCCTCTGACCCGT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANPTNKR*DSPLTR
Trigger: ACGGGTCAGAGGAGAATCTCATCTTTTATTGGTTGG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGGTGACACATGGCTGTaGTCTTCAAAGGAGTGGATC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKGDTWL*SSKEWI
Trigger: GATCCACTCCTTTGAAGATCACAGCCATGTGTCACC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAGCTCTAATTCAGGCTaGATAATCCTCTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANSSNSG*IILFSG
Trigger: CCCTGAGAAGAGGATTATTCAGCCTGAATTAGAGCT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGCTAATGTGCAGGCATaGACCTTGCCGCTTTTATTA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANANVQA*TLPLLL
Trigger: TAATAAAAGCGGCAAGGTTCATGCCTGCACATTAGC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAAGATTTCCTTTTACTaGCACGCATTGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANKISFY*HALELW
Trigger: CCACAGCTCCAATGCGTGTCAGTAAAAGGAAATCTT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTGGAATACAGTGGTGTaGCCACAGCTCACTGTAACC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKWNTVV*PQLTVT
Trigger: GGTTACAGTGAGCTGTGGTCACACCACTGTATTCCA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGGTTTGTTGCTCCATTaGTTCATGGATACTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANGLLLH*FMDTGP
Trigger: AGGACCAGTATCCATGAAGCAATGGAGCAACAAACC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGGAGAAGAACCTGATTaGCCACATCAGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKGEEPD*PHQTVW
Trigger: CCACACTGTCTGATGTGGGCAATCAGGTTCTTCTCC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCACTGTCTCTGGTACTaGTCTCCAGGGTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKHCLWY*SPGFSG
Trigger: TCCTGAAAACCCTGGAGAGCAGTACCAGAGACAGTG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCTATTAGGCTCCAGATaGGGTGGGGGATCTAGAACT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKLLGSR*GGGSRT
Trigger: AGTTCTAGATCCCCCACCGCATCTGGAGCCTAATAG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTCTGGGCCCTCTCTTTaGACAGCTTCTGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSGPSL*TASAGS
Trigger: GGAACCTGCAGAAGCTGTGCAAAGAGAGGGCCCAGA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAGGGACTGTGCACTGTaGAGGCACCCTGGTGCTATT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGRDCAL*RHPGAI
Trigger: AATAGCACCAGGGTGCCTGCACAGTGCACAGTCCCT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTTAATTCAGCTCAGCTaGTGGTATCACACTGACCTC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANLIQLS*WYHTDL
Trigger: GAGGTCAGTGTGATACCAGCAGCTGAGCTGAATTAA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GCTACTGTTGCCTATCAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCAGCTGGGACACGAGGATaGCCGGCAAAAGGTGTAATA +
Preference number: 4 (lower is better)
Translates to: ATVAYQIYEHENALSSIPAGTRG*PAKGVI
Trigger: TATTACACCTTTTGCCGGCCATCCTCGTGTCCCAGC...TGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTGATAGGCAACAGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp TGCCTTAAGCTCTATACCATCTATCTACTTGGTAAAGTGAAATATCCCCCTCTTCACCAGCCAGCACCATaGCCACAGCAAGCTTTACTA +
Preference number: 4 (lower is better)
Translates to: CLKLYTIYLLGKVKYPPLHQPAP*PQQALL
Trigger: TAGTAAAGCTTGCTGTGGCCATGGTGCTGGCTGGTG...AAGAGGGGGATATTTCACTTTACCAAGTAGATAGATGGTATAGAGCTTAAGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTGCTCCATTGCTTCATaGATACTGGTCCTATCATGC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANCSIAS*ILVLSC
Trigger: GCATGATAGGACCAGTATCCATGAAGCAATGGAGCA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTCAGGAAAGGAAGTGTaGAGGGCATTCACACCTCCT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSGKEV*RAFTPP
Trigger: AGGAGGTGTGAATGCCCTCCACACTTCCTTTCCTGA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGCTTCTGCAGGTTCCTaGGGACATGATGAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKASAGS*GHDESV
Trigger: TACTGACTCATCATGTCCCCAGGAACCTGCAGAAGC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTCCGTGTTTCTCTGGTaGCTGCTGCGACACCTCCTT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSVFLW*LLRHLL
Trigger: AAGGAGGTGTCGCAGCAGCCACCAGAGAAACACGGA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GCTACTGTTGCCTATCAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCAGAGAATTGTCAAGGCTaGCCTTCGCAGTGCACTATC +
Preference number: 4 (lower is better)
Translates to: ATVAYQIYEHENALSSIPENCQG*PSQCTI
Trigger: GATAGTGCACTGCGAAGGTCAGCCTTGACAATTCTC...TGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTGATAGGCAACAGTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATATCCATGATGATCCCTaGGGACTGCTCATTATTTAC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANIHDDP*GLLIIY
Trigger: GTAAATAATGAGCAGTCCTCAGGGATCATCATGGAT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGCTCCAGAGCTTCTCTaGTTTGCTTGGGTAACCTTT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKAPELL*FAWVTF
Trigger: AAAGGTTACCCAAGCAAATCAGAGAAGCTCTGGAGC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCTCTTCTCCTTACCCTaGGATGTGCTGTTAGAGATC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKLFSLP*DVLLEI
Trigger: GATCTCTAACAGCACATCTCAGGGTAAGGAGAAGAG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCCCTCACAAGTAAGATaGGCACACCCAGTCTCGTTC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGPSQVR*AHPVSF
Trigger: GAACGAGACTGGGTGTGCTCATCTTACTTGTGAGGG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAGGAGGAGGGGATTTTaGTTTGGATTCCGATGGGGG +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGRRRGF*FGFRWG
Trigger: CCCCCATCGGAATCCAAATCAAAATCCCCTCCTCCT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGAAGAAGGTGAGATTTaGCCAGAAAGCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANEEGEI*PESFSQ
Trigger: TTGGGAAAAGCTTTCTGGTCAAATCTCACCTTCTTC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCTGCTGGTATCACACTaGCCTCAACTGATTATACAA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANLLVSH*PQLIIQ
Trigger: TTGTATAATCAGTTGAGGTCAGTGTGATACCAGCAG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTGCAGGCATGAACCTTaGCGCTTTTATTACTGCCTG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKCRHEP*RFYYCL
Trigger: CAGGCAGTAATAAAAGCGGCAAGGTTCATGCCTGCA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCACCCCGATTTCCATGTTaGTCTCAAACAGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: KPETSLTVFHLYRTINWPPRFPC*SQTESW
Trigger: CCATGACTCTGTTTGAGACCAACATGGAAATCGGGG...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCCCCGATTTCCATGTTaGTCTCAAACAGAGTCATGG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKPRFPC*SQTESW
Trigger: CCATGACTCTGTTTGAGACCAACATGGAAATCGGGG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTCGTTGCTGCCAGGATaGTGGTCCTTGTGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSLLPG*WSLCSA
Trigger: AGCTGAACACAAGGACCACCATCCTGGCAGCAACGA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATATTTCTCAAGGATCCTaGAGTAGTCTCTACCTCCAA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANISQGS*SSLYLQ
Trigger: TTGGAGGTAGAGACTACTCCAGGATCCTTGAGAAAT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGGCCACAGGGGAACCTaGAGGCTTAACATTTTCAAT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKGHRGT*RLNIFN
Trigger: ATTGAAAATGTTAAGCCTCCAGGTTCCCCTGTGGCC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTTTACTGACACGCATTaGAGCTGTGGTTGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKFTDTH*SCGCRR
Trigger: CCTCCTACAACCACAGCTCCAATGCGTGTCAGTAAA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGATTCAGCTCAGCTGCTaGTATCACACTGACCTCAAC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKIQLSC*YHTDLN
Trigger: GTTGAGGTCAGTGTGATACCAGCAGCTGAGCTGAAT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR CAA 72 bp ACAACTCAGAAGGTCAGTACTTCAGAAAGGTACTGTTaGACCAGTGGCCAGATCTCTAAGAACATCATGGAA +
Preference number: 4 (lower is better)
Translates to: TTQKVSTSERYC*TSGQISKNIME
Trigger: TTCCATGATGTTCTTAGAGATCTGGCCACTGGTCAAACAGTACCTTTCTGAAGTACTGACCTTCTGAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCCTGTTCCTGAATTTTaGTTTCCTGGTAATCTCTAC +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANPVPEF*FPGNLY
Trigger: GTAGAGATTACCAGGAAATCAAAATTCAGGAACAGG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTACATTCCAAACACTTaGGGGCACAAGCTAGCCAAT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKYIPNT*GHKLAN
Trigger: ATTGGCTAGCTTGTGCCCTCAAGTGTTTGGAATGTA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCACCAACCAATAAAAGATaGGATTCTCCTCTGACCCGT +
Preference number: 4 (lower is better)
Translates to: KPETSLTVFHLYRTINWPPTNKR*DSPLTR
Trigger: ACGGGTCAGAGGAGAATCTCATCTTTTATTGGTTGG...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCCAACCAATAAAAGATaGGATTCTCCTCTGACCCGT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKPTNKR*DSPLTR
Trigger: ACGGGTCAGAGGAGAATCTCATCTTTTATTGGTTGG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTTCTTGCCTAGTATCCTaGAGTTTGTCTACCCTTCTC +
Preference number: 4 (lower is better)
Translates to: PETSLTVFHLYRTINWPFSCLVS*SLSTLL
Trigger: GAGAAGGGTAGACAAACTTCAGGATACTAGGCAAGA...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTACCGGAGAAGAACCTaGTTGCCCACATCAGACAGT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGYRRRT*LPTSDS
Trigger: ACTGTCTGATGTGGGCAATCAGGTTCTTCTCCGGTA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGAAGATTTCCTTTTACTaGCACGCATTGGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKKISFY*HALELW
Trigger: CCACAGCTCCAATGCGTGTCAGTAAAAGGAAATCTT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCTAGTTCTGGTAAAGTaGAGAGGGATTCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANLVLVK*RGILWK
Trigger: TTTCCAAAGAATCCCTCTTCACTTTACCAGAACTAG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTGGAATACAGTGGTGTaGCCACAGCTCACTGTAACC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGWNTVV*PQLTVT
Trigger: GGTTACAGTGAGCTGTGGTCACACCACTGTATTCCA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGGTCATCACCAGATTTaGAACTATCCACTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANGHHQI*NYPLSH
Trigger: ATGACTTAGTGGATAGTTGCAAATCTGGTGATGACC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATATGATCCCTGAGGACTaGTCATTATTTACTTGGATG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANMIPED*SLFTWM
Trigger: CATCCAAGTAAATAATGAGCAGTCCTCAGGGATCAT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGAGTTACCGTCAGACCTaGACTAGTAGATCCAATTCC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSYRQT*TSRSNS
Trigger: GGAATTGGATCTACTAGTGCAGGTCTGACGGTAACT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTCAGACAGTGTGGGCTaGAGATTCCTTATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSDSVG*RFLMRQ
Trigger: CTGCCTCATAAGGAATCTGCAGCCCACACTGTCTGA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGGAGAAGAACCTGATTaGCCACATCAGACAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGGEEPD*PHQTVW
Trigger: CCACACTGTCTGATGTGGGCAATCAGGTTCTTCTCC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCTATTAGGCTCCAGATaGGGTGGGGGATCTAGAACT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGLLGSR*GGGSRT
Trigger: AGTTCTAGATCCCCCACCGCATCTGGAGCCTAATAG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp TGCCTTAAGCTCTATACCATCTATCTACTTGGTAAAGTGAAATATCCCCCTCTTGGTAATCTCTACACCTaGTTGGAGACGAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: CLKLYTIYLLGKVKYPPLGNLYT*LETKTS
Trigger: GCTTGTCTTCGTCTCCAACCAGGTGTAGAGATTACC...AAGAGGGGGATATTTCACTTTACCAAGTAGATAGATGGTATAGAGCTTAAGGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGTCCAGCATTCTGTCTaGGCTATGTACAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGVQHSV*AMYRSG
Trigger: TCCACTCCTGTACATAGCCCAGACAGAATGCTGGAC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCTTTGTCTCACCCTGTaGCTGACTGGAGATCTGGTT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGLCLTL*LTGDLV
Trigger: AACCAGATCTCCAGTCAGCCACAGGGTGAGACAAAG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTCCTGATATCCTGGCATaGAGATTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: PETSLTVFHLYRTINWPFPDILA*RFCFME
Trigger: TTCCATGAAACAGAATCTTCATGCCAGGATATCAGG...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp GCTACTGTTGCCTATCAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCAACAGACAGGCAAACCTaGTATCCTGGCATGAAGATT +
Preference number: 4 (lower is better)
Translates to: ATVAYQIYEHENALSSIPTDRQT*YPGMKI
Trigger: AATCTTCATGCCAGGATATCAGGTTTGCCTGTCTGT...TGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTGATAGGCAACAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGCTCAAAGTCAGCCTTaGTCACAAACACATGCTTGC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGAQSQP*SQTHAC
Trigger: GCAAGCATGTGTTTGTGATCAAGGCTGACTTTGAGC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTATCCATGATGATCCCTaGGGACTGCTCATTATTTAC +
Preference number: 4 (lower is better)
Translates to: PETSLTVFHLYRTINWPFIHDDP*GLLIIY
Trigger: GTAAATAATGAGCAGTCCTCAGGGATCATCATGGAT...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp GCTACTGTTGCCTATCAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCATACATTCCAAACACTTaGGGGCACAAGCTAGCCAAT +
Preference number: 4 (lower is better)
Translates to: ATVAYQIYEHENALSSIPYIPNT*GHKLAN
Trigger: ATTGGCTAGCTTGTGCCCTCAAGTGTTTGGAATGTA...TGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTGATAGGCAACAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATCTTTGCTGCATATTTaGGGAACTGAGATTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KPETSLTVFHLYRTINWPSLLHI*GTEISL
Trigger: CAGGGAAATCTCAGTTCCTCAAATATGCAGCAAAGA...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCTGTTATTTTTGTGCTaGGCTGAATGTTTCCTACTT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANLLFLC*AECFLL
Trigger: AAGTAGGAAACATTCAGCTCAGCACAAAAATAACAG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCCAGATGTTTTGGGATaGGGAGACACAACAACAGTG +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGPDVLG*GDTTTV
Trigger: CACTGTTGTTGTGTCTCCTCATCCCAAAACATCTGG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGATGATGAGTCAGTACTaGGTCTGGTTTATCAGCAGA +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKMMSQY*VWFISR
Trigger: TCTGCTGATAAACCAGACTCAGTACTGACTCATCAT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGTGGACCCACGGAGCTaGAAAGATTTCCTTTTACTG +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGVDPRS*KDFLLL
Trigger: CAGTAAAAGGAAATCTTTTCAGCTCCGTGGGTCCAC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTGGGTAGATGAGACATaGTGTTTGATTGAGACTACC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKWVDET*CLIETT
Trigger: GGTAGTCTCAATCAAACATCATGTCTCATCTACCCA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGTCCAAAAGTCCCTCTaGCAATTAAACAATCAGTTT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANVQKSL*QLNNQF
Trigger: AAACTGATTGTTTAATTGTCAGAGGGACTTTTGGAC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTACTGAGATTTCCCTGTaGCAGGATCCCCAACCAATA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGTEISL*QDPQPI
Trigger: TATTGGTTGGGGATCCTGGCACAGGGAAATCTCAGT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCTTGAAAGTAAATTTTaGCAGTTTGGCCACAGGGGA +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKLESKF*QFGHRG
Trigger: TCCCCTGTGGCCAAACTGGCAAAATTTACTTTCAAG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTTTAGGACTATGAACTaGTATTTTAGTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANFRTMN*YFSCTR
Trigger: CCTGGTGCAACTAAAATAGCAGTTCATAGTCCTAAA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCAGGCATTAACCACAACTaGGTAATGAGCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: KPETSLTVFHLYRTINWPGINHN*VMSIFI
Trigger: GATGAAGATGCTCATTACCCAGTTGTGGTTAATGCC...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGGTAATCTCTACACCTaGTTGGAGACGAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGGNLYT*LETKTS
Trigger: GCTTGTCTTCGTCTCCAACCAGGTGTAGAGATTACC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTTCTTCGAATTCCTTTTaGACCTCCTCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: PETSLTVFHLYRTINWPFSSNSF*TSSSMM
Trigger: CATCATGGATGAGGAGGTCCAAAAGGAATTCGAAGA...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTCTTCGAATTCCTTTTaGACCTCCTCATCCATGATG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSSNSF*TSSSMM
Trigger: CATCATGGATGAGGAGGTCCAAAAGGAATTCGAAGA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAGTTCACACTGTCTCTaGTACTGCTCTCCAGGGTTT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSSHCL*YCSPGF
Trigger: AAACCCTGGAGAGCAGTACCAGAGACAGTGTGAACT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGAGAAGTTTGCCAATCTaGCTAATGTGCAGGCATGAA +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKRSLPI*LMCRHE
Trigger: TTCATGCCTGCACATTAGCCAGATTGGCAAACTTCT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp TTGAGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGGCTCAAAGTCAGCCTTaGTCACAAACACATGCTTGC +
Preference number: 4 (lower is better)
Translates to: LSYISKPETSLTVFHLYRAQSQP*SQTHAC
Trigger: GCAAGCATGTGTTTGTGATCAAGGCTGACTTTGAGC...CCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGATGTTTCCTACTTGTTaGTCTATTAGGCTCCAGATG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKMFPTC*SIRLQM
Trigger: CATCTGGAGCCTAATAGATCAACAAGTAGGAAACAT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGCTAATGTGCAGGCATaGACCTTGCCGCTTTTATTA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGANVQA*TLPLLL
Trigger: TAATAAAAGCGGCAAGGTTCATGCCTGCACATTAGC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTACCATATTGATATCCTaGAGGTCCTCTGTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGTILIS*RSSVEL
Trigger: CAACTCCACAGAGGACCTTCAGGATATCAATATGGT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCAATGATCCCTGAGGACTaGTCATTATTTACTTGGATG +
Preference number: 4 (lower is better)
Translates to: KPETSLTVFHLYRTINWPMIPED*SLFTWM
Trigger: CATCCAAGTAAATAATGAGCAGTCCTCAGGGATCAT...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR GCA 90 bp TTGAGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACTGAGATTTCCCTGTaGCAGGATCCCCAACCAATA +
Preference number: 4 (lower is better)
Translates to: LSYISKPETSLTVFHLYRTEISL*QDPQPI
Trigger: TATTGGTTGGGGATCCTGGCACAGGGAAATCTCAGT...CCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR GCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAGAGCTTCTCTGATTTaGTTGGGTAACCTTTATTTT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANRASLI*LGNLYF
Trigger: AAAATAAAGGTTACCCAAGCAAATCAGAGAAGCTCT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAAATCTACTGGGTTCTaGAGAAACAGTGGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGKSTGF*RNSGCV
Trigger: GACACAGCCACTGTTTCTGCAGAACCCAGTAGATTT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619706.5
CDS-3UTR CCA 90 bp GCTACTGTTGCCTATCAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCAGGTCAGCACAGATCTTaGTGTAATCTTTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: ATVAYQIYEHENALSSIPGQHRS*CNLCCI
Trigger: TATGCAGCAAAGATTACACCAAGATCTGTGCTGACC...TGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTGATAGGCAACAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTCTCTAAGAACATCATaGAATTGTAAGGATACCTCT +
Preference number: 4 (lower is better)
Translates to: LESLKGEPVFRVILNMANSLRTS*NCKDTS
Trigger: AGAGGTATCCTTACAATTCCATGATGTTCTTAGAGA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCCTGATATCCTGGCATaGAGATTCTGTTTCATGGAA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGPDILA*RFCFME
Trigger: TTCCATGAAACAGAATCTTCATGCCAGGATATCAGG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GATTGTTCAAAACTAAGATGCAAAGTGAAGGTGGAGCTTGCAAGATATTTTCTTGAATCACTGTCCCAGTaGCAGATAAAAAGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: DCSKLRCKVKVELARYFLESLSQ*QIKSVP
Trigger: TGGGACACTTTTTATCTGTCACTGGGACAGTGATTC...AAGAAAATATCTTGCAAGCTCCACCTTCACTTTGCATCTTAGTTTTGAACAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTATCTACTTGGTAAAGTaGAATATCCCCCTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: PETSLTVFHLYRTINWPFIYLVK*NIPLFS
Trigger: ACTAAAGAGGGGGATATTTCACTTTACCAAGTAGAT...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGCTGCAGATTCCTTATaGGGCAGAAATAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGAADSL*GRNRFS
Trigger: TGAAAACCTATTTCTGCCTCATAAGGAATCTGCAGC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTCTGATGAGTTGCCATaGAATCAAACCAATCTAAAC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSDELP*NQTNLN
Trigger: GTTTAGATTGGTTTGATTTCATGGCAACTCATCAGA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAGCCAGTATTCAGAGTaGTCCTCAATATGGCCAATT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSQYSE*SSIWPI
Trigger: AATTGGCCATATTGAGGATCACTCTGAATACTGGCT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCTGCTGGTATCACACTaGCCTCAACTGATTATACAA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGLLVSH*PQLIIQ
Trigger: TTGTATAATCAGTTGAGGTCAGTGTGATACCAGCAG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTACTTGGATGTAATTTaGTTTCAGGACTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKYLDVI*FQDYLH
Trigger: GTGGAGATAGTCCTGAAAGCAAATTACATCCAAGTA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTTGTTCAAAACTAAGATaGAAAGTGAAGGTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PETSLTVFHLYRTINWPFCSKLR*KVKVEL
Trigger: AAGCTCCACCTTCACTTTGCATCTTAGTTTTGAACA...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGGCATTAACCACAACTaGGTAATGAGCATCTTCATC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGGINHN*VMSIFI
Trigger: GATGAAGATGCTCATTACCCAGTTGTGGTTAATGCC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGGTCAGCACAGATCTTaGTGTAATCTTTGCTGCATA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGGQHRS*CNLCCI
Trigger: TATGCAGCAAAGATTACACCAAGATCTGTGCTGACC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp CCTGAAGTTTGTCTACCCTTCTCAATTCCAAAAATCCATTCTTGTCAATGGTTAGTATTCCGAAACATATaGCTCAAACACTTGACCAAC +
Preference number: 4 (lower is better)
Translates to: PEVCLPFSIPKIHSCQWLVFRNI*LKHLTN
Trigger: GTTGGTCAAGTGTTTGAGTCATATGTTTCGGAATAC...TAACCATTGACAAGAATGGATTTTTGGAATTGAGAAGGGTAGACAAACTTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGTATTCCGAAACATATaGCTCAAACACTTGACCAAC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGVFRNI*LKHLTN
Trigger: GTTGGTCAAGTGTTTGAGTCATATGTTTCGGAATAC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp CCTGAAGTTTGTCTACCCTTCTCAATTCCAAAAATCCATTCTTGTCAATGGTTACCTGTTCCTGAATTTTaGTTTCCTGGTAATCTCTAC +
Preference number: 4 (lower is better)
Translates to: PEVCLPFSIPKIHSCQWLPVPEF*FPGNLY
Trigger: GTAGAGATTACCAGGAAATCAAAATTCAGGAACAGG...TAACCATTGACAAGAATGGATTTTTGGAATTGAGAAGGGTAGACAAACTTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCTAGTTCTGGTAAAGTaGAGAGGGATTCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGLVLVK*RGILWK
Trigger: TTTCCAAAGAATCCCTCTTCACTTTACCAGAACTAG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTTGATCACAAACACATaGTTGCATTTGTTACACATG +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKLITNT*LHLLHM
Trigger: CATGTGTAACAAATGCAAGCATGTGTTTGTGATCAA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTATGATCCCTGAGGACTaGTCATTATTTACTTGGATG +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGMIPED*SLFTWM
Trigger: CATCCAAGTAAATAATGAGCAGTCCTCAGGGATCAT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp AGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCGTCACATACAATACCTaGACTAGTAGATCCAATTCC +
Preference number: 4 (lower is better)
Translates to: SYISKPETSLTVFHLYRTVTYNT*TSRSNS
Trigger: GGAATTGGATCTACTAGTGCAGGTATTGTATGTGAC...GGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR GCA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGAGAGCTTCTCTGATTTaGTTGGGTAACCTTTATTTT +
Preference number: 4 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKRASLI*LGNLYF
Trigger: AAAATAAAGGTTACCCAAGCAAATCAGAGAAGCTCT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTTTCTCCAGATGTTTTaGGATGAGGAGACACAACAA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGFLQMF*DEETQQ
Trigger: TTGTTGTGTCTCCTCATCCCAAAACATCTGGAGAAA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp CAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCATCTATCTACTTGGTACCAACCAGTGTAACTTaGTCGCTATTCATCTTGAAT +
Preference number: 4 (lower is better)
Translates to: QIYEHENALSSIPSIYLVPTSVT*SLFILN
Trigger: ATTCAAGATGAATAGCGATCAAGTTACACTGGTTGG...TACCAAGTAGATAGATGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTCTGATGAGTTGCCATaGAATCAAACCAATCTAAAC +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSDELP*NQTNLN
Trigger: GTTTAGATTGGTTTGATTTCATGGCAACTCATCAGA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTATGAGACATGATGTTTaGTTGAGACTACCACATAGT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGMRHDV*LRLPHS
Trigger: ACTATGTGGTAGTCTCAATCAAACATCATGTCTCAT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR GCA 90 bp GCTACTGTTGCCTATCAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCATTGATCACAAACACATaGTTGCATTTGTTACACATG +
Preference number: 4 (lower is better)
Translates to: ATVAYQIYEHENALSSIPLITNT*LHLLHM
Trigger: CATGTGTAACAAATGCAAGCATGTGTTTGTGATCAA...TGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTGATAGGCAACAGTAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR GCA 90 bp GATTGTTCAAAACTAAGATGCAAAGTGAAGGTGGAGCTTGCAAGATATTTTCTTGGTCATCACCAGATTTaGAACTATCCACTAAGTCAT +
Preference number: 4 (lower is better)
Translates to: DCSKLRCKVKVELARYFLGHHQI*NYPLSH
Trigger: ATGACTTAGTGGATAGTTGCAAATCTGGTGATGACC...AAGAAAATATCTTGCAAGCTCCACCTTCACTTTGCATCTTAGTTTTGAACAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR GCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTACACTTATGGTTTGTTaGTCCATTGCTTCATGGATA +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGTLMVC*SIASWI
Trigger: TATCCATGAAGCAATGGAGCAACAAACCATAAGTGT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR TCA 90 bp CAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCATCTATCTACTTGGTAAGCTCCACATTGCAATaGTGGAAGTATATTTTCCAA +
Preference number: 4 (lower is better)
Translates to: QIYEHENALSSIPSIYLVSSTLQ*WKYIFQ
Trigger: TTGGAAAATATACTTCCATCATTGCAATGTGGAGCT...TACCAAGTAGATAGATGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR GCA 90 bp TTGAGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGTACTTGGATGTAATTTaGTTTCAGGACTATCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSYISKPETSLTVFHLYRYLDVI*FQDYLH
Trigger: GTGGAGATAGTCCTGAAAGCAAATTACATCCAAGTA...CCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CCA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTCTCTAAGAACATCATaGAATTGTAAGGATACCTCT +
Preference number: 4 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGSLRTS*NCKDTS
Trigger: AGAGGTATCCTTACAATTCCATGATGTTCTTAGAGA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
3UTR CAA 72 bp GGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATaGTTCTATACATTTATAAATACCATATTGATATCC +
Preference number: 4 (lower is better)
Translates to: GASIQSDPQYGQ*FYTFINTILIS
Trigger: GGATATCAATATGGTATTTATAAATGTATAGAACAATTGGCCATATTGAGGATCACTCTGAATACTGGCTCC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp AGGCAGCGGGTTCGTCTCCGGCGCAAGAAGGCTGGTGAGGCGGAGTaGGCGCGTGCACGTGGCCGCTCGAGGCGCCACCGGCCGCGGGGA +
Preference number: 5 (lower is better)
Translates to: RQRVRLRRKKAGEAE*ARARGRSRRHRPRG
Trigger: TCCCCGCGGCCGGTGGCGCCTCGAGCGGCCACGTGCACGCGCGCACTCCGCCTCACCAGCCTTCTTGCGCCGGAGACGAACCCGCTGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000619706.5
CDS TCA 90 bp AGCTCCAGCCAGGCAGCGGGTTCGTCTCCGGCGCAAGAAGGCTGGTaGGGCGGAGTGCGCGCGTGCACGTGGCCGCTCGAGGCGCCACCG +
Preference number: 5 (lower is better)
Translates to: SSSQAAGSSPAQEGW*GGVRACTWPLEAPP
Trigger: CGGTGGCGCCTCGAGCGGCCACGTGCACGCGCGCACTCCGCCTCACCAGCCTTCTTGCGCCGGAGACGAACCCGCTGCCTGGCTGGAGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp ATTCCGGGAGCGGGAGCCCATCTTGCTGGCTGCCGAGGCCCTCGCTaGAGGAGGAGGGTCAGAACTCGGGTGCAGCCAATCGAGGGCAAC +
Preference number: 5 (lower is better)
Translates to: IPGAGAHLAGCRGPR*RRRVRTRVQPIEGN
Trigger: GTTGCCCTCGATTGGCTGCACCCGAGTTCTGACCCTCCTCCTCCAGCGAGGGCCTCGGCAGCCAGCAAGATGGGCTCCCGCTCCCGGAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368478.2
ENST00000505485.1
CDS GCA 90 bp GTTCTGCAGAAACAGTGGCTGTGTCAGAAGTCGCCGGGAACGCGTTaGTCCCGAGGCCGAAGGGCCCAGAGAGCTCCAGCCAGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: VLQKQWLCQKSPGTR*SRGRRAQRAPARQR
Trigger: CCGCTGCCTGGCTGGAGCTCTCTGGGCCCTTCGGCCTCGGGAGCAACGCGTTCCCGGCGACTTCTGACACAGCCACTGTTTCTGCAGAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425154.6
ENST00000619706.5
CDS GCA 90 bp AAAGTTTCCGAGTCCATTCCGGGAGCGGGAGCCCATCTTGCTGGCTaGCGAGGCCCTCGCTGGAGGAGGAGGGTCAGAACTCGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: KVSESIPGAGAHLAG*RGPRWRRRVRTRVQ
Trigger: CTGCACCCGAGTTCTGACCCTCCTCCTCCAGCGAGGGCCTCGGCAGCCAGCAAGATGGGCTCCCGCTCCCGGAATGGACTCGGAAACTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368478.2
ENST00000505485.1
CDS GCA 90 bp CTGGCTGCCGAGGCCCTCGCTGGAGGAGGAGGGTCAGAACTCGGGTaGAGCCAATCGAGGGCAACGCTGCTACTTATCAGAGCAGAATGG +
Preference number: 5 (lower is better)
Translates to: LAAEALAGGGGSELG*SQSRATLLLIRAEW
Trigger: CCATTCTGCTCTGATAAGTAGCAGCGTTGCCCTCGATTGGCTGCACCCGAGTTCTGACCCTCCTCCTCCAGCGAGGGCCTCGGCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368478.2
ENST00000505485.1
CDS GCA 90 bp AGACACGGACTCCTGGGGGTCGTACTGGCCTTTGGGGTTCGTTGCTaGCAGGATGGTGGTCCTTGTGTTCAGCTTGCACACGAGGCCAGC +
Preference number: 5 (lower is better)
Translates to: RHGLLGVVLAFGVRC*QDGGPCVQLAHEAS
Trigger: GCTGGCCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000505485.1
ENST00000619706.5
CDS CCA 90 bp CTGCCGAGGGCAATGTTCACAGACACGGACTCCTGGGGGTCGTACTaGCCTTTGGGGTTCGTTGCTGCCAGGATGGTGGTCCTTGTGTTC +
Preference number: 5 (lower is better)
Translates to: LPRAMFTDTDSWGSY*PLGFVAARMVVLVF
Trigger: GAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGTGAACATTGCCCTCGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CCA 90 bp GGGCAATGTTCACAGACACGGACTCCTGGGGGTCGTACTGGCCTTTaGGGTTCGTTGCTGCCAGGATGGTGGTCCTTGTGTTCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: GQCSQTRTPGGRTGL*GSLLPGWWSLCSAC
Trigger: GCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGTGAACATTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CCA 90 bp ACTCCTGGGGGTCGTACTGGCCTTTGGGGTTCGTTGCTGCCAGGATaGTGGTCCTTGTGTTCAGCTTGCACACGAGGTTTGTTCTCCGCC +
Preference number: 5 (lower is better)
Translates to: TPGGRTGLWGSLLPG*WSLCSACTRGLFSA
Trigger: GGCGGAGAACAAACCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368478.2
CDS GCA 90 bp AGACACGGACTCCTGGGGGTCGTACTGGCCTTTGGGGTTCGTTGCTaGCAGGATGGTGGTCCTTGTGTTCAGCTTGCACACGAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: RHGLLGVVLAFGVRC*QDGGPCVQLAHEVC
Trigger: ACAAACCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368478.2
CDS CCA 90 bp CTCAGGGGCACACATCACCTTCTCTCTTGGTCCGTGTTTCTCTGGTaGCTGCTGCGACACCTCCTTTGTCTCACCCTGTGGCTGACTGGA +
Preference number: 5 (lower is better)
Translates to: LRGTHHLLSWSVFLW*LLRHLLCLTLWLTG
Trigger: TCCAGTCAGCCACAGGGTGAGACAAAGGAGGTGTCGCAGCAGCCACCAGAGAAACACGGACCAAGAGAGAAGGTGATGTGTGCCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp CCTGGGGGTCGTACTGGCCTTTGGGGTTCGTTGCTGCCAGGATGGTaGTCCTTGTGTTCAGCTTGCACACGAGGTTTGTTCTCCGCCTTT +
Preference number: 5 (lower is better)
Translates to: PGGRTGLWGSLLPGW*SLCSACTRGLFSAF
Trigger: AAAGGCGGAGAACAAACCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368478.2
CDS TCA 90 bp TTGGGTGAGTCCAGCATTCTGTCTGGGCTATGTACAGGAGTGGACTaGGGATGGGAAGGGACTGTGCACTGTGCAGGCACCCTGGTGCTA +
Preference number: 5 (lower is better)
Translates to: LGESSILSGLCTGVD*GWEGTVHCAGTLVL
Trigger: TAGCACCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATCCTCAGTCCACTCCTGTACATAGCCCAGACAGAATGCTGGACTCACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp GATGGGAAGGGACTGTGCACTGTGCAGGCACCCTGGTGCTATTTCTaGACAACTTCTGGGCCCTCTCTTTGCACAGCTTCTGCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: DGKGLCTVQAPWCYF*TTSGPSLCTASAGS
Trigger: GGAACCTGCAGAAGCTGTGCAAAGAGAGGGCCCAGAAGTTGTGCAGAAATAGCACCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp GAGTGGACTGAGGATGGGAAGGGACTGTGCACTGTGCAGGCACCCTaGTGCTATTTCTGCACAACTTCTGGGCCCTCTCTTTGCACAGCT +
Preference number: 5 (lower is better)
Translates to: EWTEDGKGLCTVQAP*CYFCTTSGPSLCTA
Trigger: AGCTGTGCAAAGAGAGGGCCCAGAAGTTGTGCAGAAATAGCACCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATCCTCAGTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGTCGCCGGGAACGCGTaGCTCCCGAGGCCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANVAGNA*LPRPKG
Trigger: GCCCTTCGGCCTCGGGAGCAACGCGTTCCCGGCGAC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGTCCTTGTGTTCAGCTaGCACACGAGGCCAGCCTTA +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHVLVFS*HTRPAL
Trigger: TAAGGCTGGCCTCGTGTGCAAGCTGAACACAAGGAC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp TGGACTGAGGATGGGAAGGGACTGTGCACTGTGCAGGCACCCTGGTaGTATTTCTGCACAACTTCTGGGCCCTCTCTTTGCACAGCTTCT +
Preference number: 5 (lower is better)
Translates to: WTEDGKGLCTVQAPW*YFCTTSGPSLCTAS
Trigger: AGAAGCTGTGCAAAGAGAGGGCCCAGAAGTTGTGCAGAAATAGCACCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATCCTCAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp TGTCTGGGCTATGTACAGGAGTGGACTGAGGATGGGAAGGGACTGTaGACTGTGCAGGCACCCTGGTGCTATTTCTGCACAACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: CLGYVQEWTEDGKGL*TVQAPWCYFCTTSG
Trigger: CCCAGAAGTTGTGCAGAAATAGCACCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATCCTCAGTCCACTCCTGTACATAGCCCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTGTAGCATCAGTCCTTaGAATCCCACCAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHCSISP*NPTSQH
Trigger: GTGCTGGCTGGTGGGATTCAAAGGACTGATGCTACA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGCAATCACTCTGCCTTaGCATCTGGTAGTACCGGAG +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHAITLP*HLVVPE
Trigger: CTCCGGTACTACCAGATGCAAAGGCAGAGTGATTGC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp CAGGCACCCTGGTGCTATTTCTGCACAACTTCTGGGCCCTCTCTTTaGACAGCTTCTGCAGGTTCCTGGGGACATGATGAGTCAGTACTG +
Preference number: 5 (lower is better)
Translates to: QAPWCYFCTTSGPSL*TASAGSWGHDESVL
Trigger: CAGTACTGACTCATCATGTCCCCAGGAACCTGCAGAAGCTGTGCAAAGAGAGGGCCCAGAAGTTGTGCAGAAATAGCACCAGGGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp CACTGTCTCTGGTACTGCTCTCCAGGGTTTTCAGGAAAGGAAGTGTaGAGGGCATTCACACCTCCTAGCAGTGCACCTCCCTGCATTGAG +
Preference number: 5 (lower is better)
Translates to: HCLWYCSPGFSGKEV*RAFTPPSSAPPCIE
Trigger: CTCAATGCAGGGAGGTGCACTGCTAGGAGGTGTGAATGCCCTCCACACTTCCTTTCCTGAAAACCCTGGAGAGCAGTACCAGAGACAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000458674.2
ENST00000619706.5
CDS-3UTR CAA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCAGTCGCCGGGAACGCGTaGCTCCCGAGGCCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: KPETSLTVFHLYRTINWPVAGNA*LPRPKG
Trigger: GCCCTTCGGCCTCGGGAGCAACGCGTTCCCGGCGAC...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACAAAGGGACTGGAGAATaGTCAAGGCTGACCTTCGCA +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHKGTGE*SRLTFA
Trigger: TGCGAAGGTCAGCCTTGACAATTCTCCAGTCCCTTT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGAACCTTCACCAGACTaGTTCGAATCACTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHEPSPD*FESLSQ
Trigger: CTGGGACAGTGATTCGAACAAGTCTGGTGAAGGTTC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGTAAATTTTGCCAGTTaGGCCACAGGGGAACCTGGA +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHVNFAS*ATGEPG
Trigger: TCCAGGTTCCCCTGTGGCCAAACTGGCAAAATTTAC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp GAACACCTGTCTCTCCTGGTGATGGAAGCAACCCAATGTCCACTTTaGTCCTTTGGCCTGGCTCACTCTTCTCCTTACCCTGAGATGTGC +
Preference number: 5 (lower is better)
Translates to: EHLSLLVMEATQCPL*SFGLAHSSPYPEMC
Trigger: GCACATCTCAGGGTAAGGAGAAGAGTGAGCCAGGCCAAAGGAGCAAAGTGGACATTGGGTTGCTTCCATCACCAGGAGAGACAGGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp CATGAGCTTCTGCTAATCGTATCAAGCTTTCCAACAGCCGAATGGTaGTCCGGGCAGCGTTCCGGCAATCACTCTGCCTTTGCATCTGGT +
Preference number: 5 (lower is better)
Translates to: HELLLIVSSFPTAEW*SGQRSGNHSAFASG
Trigger: ACCAGATGCAAAGGCAGAGTGATTGCCGGAACGCTGCCCGGACCACCATTCGGCTGTTGGAAAGCTTGATACGATTAGCAGAAGCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp GAGCATGAGCTTCTGCTAATCGTATCAAGCTTTCCAACAGCCGAATaGTGGTCCGGGCAGCGTTCCGGCAATCACTCTGCCTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: EHELLLIVSSFPTAE*WSGQRSGNHSAFAS
Trigger: AGATGCAAAGGCAGAGTGATTGCCGGAACGCTGCCCGGACCACCATTCGGCTGTTGGAAAGCTTGATACGATTAGCAGAAGCTCATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp AGGCTGAATAATCCTCTTCTCAGGGGCACACATCACCTTCTCTCTTaGTCCGTGTTTCTCTGGTGGCTGCTGCGACACCTCCTTTGTCTC +
Preference number: 5 (lower is better)
Translates to: RLNNPLLRGTHHLLS*SVFLWWLLRHLLCL
Trigger: GAGACAAAGGAGGTGTCGCAGCAGCCACCAGAGAAACACGGACCAAGAGAGAAGGTGATGTGTGCCCCTGAGAAGAGGATTATTCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACAGGCTGCGTCTCTTCTaGTTCTACGCTGGGAAATTT +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHRLRLF*FYAGKF
Trigger: AAATTTCCCAGCGTAGAACAAGAAGAGACGCAGCCT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACCAGTATTTTACTTGGTaGAAGGTAGGCCCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHQYFTW*KVGPQE
Trigger: CTCTTGGGGGCCTACCTTCAACCAAGTAAAATACTG...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 90 bp AGGCTCTTCCACTTGCGCAAGGGATTTCGGTCTCTTTCTTTTGGGTaGGTCCAGCATTCTGTCTGGGCTATGTACAGGAGTGGACTGAGG +
Preference number: 5 (lower is better)
Translates to: RLFHLRKGFRSLSFG*VQHSVWAMYRSGLR
Trigger: CCTCAGTCCACTCCTGTACATAGCCCAGACAGAATGCTGGACTCACCCAAAAGAAAGAGACCGAAATCCCTTGCGCAAGTGGAAGAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp TATCAAGCAAAACCAGGATCAGGTCAAATCGACTTAAGAGTGGGCTaGCGAGGGCAATGTTCACAGACACGGACTCCTGGGGGTCGTACT +
Preference number: 5 (lower is better)
Translates to: YQAKPGSGQIDLRVG*RGQCSQTRTPGGRT
Trigger: AGTACGACCCCCAGGAGTCCGTGTCTGTGAACATTGCCCTCGGCAGCCCACTCTTAAGTCGATTTGACCTGATCCTGGTTTTGCTTGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGTCGCCGGGAACGCGTaGCTCCCGAGGCCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGVAGNA*LPRPKG
Trigger: GCCCTTCGGCCTCGGGAGCAACGCGTTCCCGGCGAC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTGCTCAAAGTCAGCCTaGATCACAAACACATGCTTG +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHCSKSA*ITNTCL
Trigger: CAAGCATGTGTTTGTGATCAAGGCTGACTTTGAGCA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGGCCTTTGGGGTTCGTaGCTGCCAGGATGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANGLWGS*LPGWWS
Trigger: GGACCACCATCCTGGCAGCAACGAACCCCAAAGGCC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGGGTCGTACTGGCCTTaGGGGTTCGTTGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANGSYWP*GFVAAR
Trigger: CCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTTGTTACTTTCCACATaGTCTGCCCTCCATGGAACA +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHLLLST*SALHGT
Trigger: TGTTCCATGGAGGGCAGACAATGTGGAAAGTAACAA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACGTGAAGAGGGATTCTTaGGAAACAATCAGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHVKRDS*ETISFS
Trigger: CGAGAAACTGATTGTTTCCAAAGAATCCCTCTTCAC...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp AGGCTCTGCAGCTCTAGCTTTTCCAGAATAAGTTCACACTGTCTCTaGTACTGCTCTCCAGGGTTTTCAGGAAAGGAAGTGTGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: RLCSSSFSRISSHCL*YCSPGFSGKEVWRA
Trigger: TGCCCTCCACACTTCCTTTCCTGAAAACCCTGGAGAGCAGTACCAGAGACAGTGTGAACTTATTCTGGAAAAGCTAGAGCTGCAGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000458674.2
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACTGCTCTTTGAGGCTATaGAACTCATCAATACAGCAA +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHCSLRL*NSSIQQ
Trigger: TTGCTGTATTGATGAGTTCAATAGCCTCAAAGAGCA...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp AGTGAATTTAGAGGAATCACAGCTCTCCAAGCTGGGACACGAGGATaGCCGGCAAAAGGTGTAATACTGCTCAAAGTCAGCCTTGATCAC +
Preference number: 5 (lower is better)
Translates to: SEFRGITALQAGTRG*PAKGVILLKVSLDH
Trigger: GTGATCAAGGCTGACTTTGAGCAGTATTACACCTTTTGCCGGCCATCCTCGTGTCCCAGCTTGGAGAGCTGTGATTCCTCTAAATTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTTCACAGCGCACATCTaGCTGAAAGGGCTTCCACCG +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANFTAHI*LKGLPP
Trigger: CGGTGGAAGCCCTTTCAGCAAGATGTGCGCTGTGAA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATCTCCAATACCCGTGGTaGGGATTGGTGCACACTCTG +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANLQYPW*GLVHTL
Trigger: CAGAGTGTGCACCAATCCCAACCACGGGTATTGGAG...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTGCAGGCTCTTCCACTaGCGCAAGGGATTTCGGTCT +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANCRLFH*RKGFRS
Trigger: AGACCGAAATCCCTTGCGCAAGTGGAAGAGCCTGCA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GCAATCATCCTGCCTCAGCCTCCCCGAGTAGCTAGGACTACAGGAGTGAGTCACATAGAAAGACAAAGCTaGAGGTTATCTATTCTGACC +
Preference number: 5 (lower is better)
Translates to: AIILPQPPRVARTTGVSHIERQS*RLSILT
Trigger: GGTCAGAATAGATAACCTCAAGCTTTGTCTTTCTAT...GTGACTCACTCCTGTAGTCCTAGCTACTCGGGGAGGCTGAGGCAGGATGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp AAACTTCCTGATGCCTCAGAAGAAGCTGAGCCTATGTCTGCACCATaGTTCCTGTACAGCCTGTGGAACTGTGAGCCAATTAAACCTCTT +
Preference number: 5 (lower is better)
Translates to: KLPDASEEAEPMSAP*FLYSLWNCEPIKPL
Trigger: AAGAGGTTTAATTGGCTCACAGTTCCACAGGCTGTACAGGAAGCATGGTGCAGACATAGGCTCAGCTTCTTCTGAGGCATCAGGAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTGTAGCATCAGTCCTTaGAATCCCACCAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANCSISP*NPTSQH
Trigger: GTGCTGGCTGGTGGGATTCAAAGGACTGATGCTACA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGGCCTTTGGGGTTCGTaGCTGCCAGGATGGTGGTCC +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGGLWGS*LPGWWS
Trigger: GGACCACCATCCTGGCAGCAACGAACCCCAAAGGCC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGGGTCGTACTGGCCTTaGGGGTTCGTTGCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGGSYWP*GFVAAR
Trigger: CCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAACCCAATGTCCACTTaGCTCCTTTGGCCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANNPMST*LLWPGS
Trigger: TGAGCCAGGCCAAAGGAGCAAAGTGGACATTGGGTT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 90 bp AATGAAAACATTGAGGACCCTCAGAAGACAGCAGACTACAATCAGTaGCTCCAATCACGGTGTCACCAGCACAGAGCAGAGAGGAATGAT +
Preference number: 5 (lower is better)
Translates to: NENIEDPQKTADYNQ*LQSRCHQHRAERND
Trigger: ATCATTCCTCTCTGCTCTGTGCTGGTGACACCGTGATTGGAGTCACTGATTGTAGTCTGCTGTCTTCTGAGGGTCCTCAATGTTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 90 bp ACATTTGCTATCTACCAGCAGAAGGAGAATCAGCAGGCAGATGACTaGAAGCAGCAGTCTAAGAGAAACACAGTGACAGCCACAGATGGA +
Preference number: 5 (lower is better)
Translates to: TFAIYQQKENQQADD*KQQSKRNTVTATDG
Trigger: TCCATCTGTGGCTGTCACTGTGTTTCTCTTAGACTGCTGCTTTCAGTCATCTGCCTGCTGATTCTCCTTCTGCTGGTAGATAGCAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 90 bp AGATCCAATTCCTGTGGTCAGCACAGATCTTGGTGTAATCTTTGCTaGATATTTGAGGAACTGAGATTTCCCTGTGCCAGGATCCCCAAC +
Preference number: 5 (lower is better)
Translates to: RSNSCGQHRSWCNLC*IFEELRFPCARIPN
Trigger: GTTGGGGATCCTGGCACAGGGAAATCTCAGTTCCTCAAATATGCAGCAAAGATTACACCAAGATCTGTGCTGACCACAGGAATTGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS-3UTR CAA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTTTCACAGCGCACATCTaGCTGAAAGGGCTTCCACCG +
Preference number: 5 (lower is better)
Translates to: PETSLTVFHLYRTINWPFFTAHI*LKGLPP
Trigger: CGGTGGAAGCCCTTTCAGCAAGATGTGCGCTGTGAA...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTTCACAGCGCACATCTaGCTGAAAGGGCTTCCACCG +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKFTAHI*LKGLPP
Trigger: CGGTGGAAGCCCTTTCAGCAAGATGTGCGCTGTGAA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGCCAGGATGGTGGTCCTaGTGTTCAGCTTGCACACGA +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKPGWWS*CSACTR
Trigger: TCGTGTGCAAGCTGAACACAAGGACCACCATCCTGG...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGTCCACTTTGCTCCTTaGGCCTGGCTCACTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKVHFAP*AWLTLL
Trigger: GAGAAGAGTGAGCCAGGCCAAAGGAGCAAAGTGGAC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTTCTGGGCCCTCTCTTaGCACAGCTTCTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKFWALS*HSFCRF
Trigger: GAACCTGCAGAAGCTGTGCAAAGAGAGGGCCCAGAA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTGCAGGCTCTTCCACTaGCGCAAGGGATTTCGGTCT +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKCRLFH*RKGFRS
Trigger: AGACCGAAATCCCTTGCGCAAGTGGAAGAGCCTGCA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 90 bp ACGAGGATGGCCGGCAAAAGGTGTAATACTGCTCAAAGTCAGCCTTaGTCACAAACACATGCTTGCATTTGTTACACATGTAATCCCGCT +
Preference number: 5 (lower is better)
Translates to: TRMAGKRCNTAQSQP*SQTHACICYTCNPA
Trigger: AGCGGGATTACATGTGTAACAAATGCAAGCATGTGTTTGTGATCAAGGCTGACTTTGAGCAGTATTACACCTTTTGCCGGCCATCCTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS TCA 90 bp AGCACCATGGCCACAGCAAGCTTTACTAGATACATTCCAAACACTTaGGGGCACAAGCTAGCCAATATTACATTCCTTCCTGCAAAGGGA +
Preference number: 5 (lower is better)
Translates to: STMATASFTRYIPNT*GHKLANITFLPAKG
Trigger: TCCCTTTGCAGGAAGGAATGTAATATTGGCTAGCTTGTGCCCTCAAGTGTTTGGAATGTATCTAGTAAAGCTTGCTGTGGCCATGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS TCA 90 bp AGGGATTCTTTGGAAACAATCAGTTTCTCGGTGGACCCACGGAGCTaGAAAGATTTCCTTTTACTGACACGCATTGGAGCTGTGGTTGTA +
Preference number: 5 (lower is better)
Translates to: RDSLETISFSVDPRS*KDFLLLTRIGAVVV
Trigger: TACAACCACAGCTCCAATGCGTGTCAGTAAAAGGAAATCTTTTCAGCTCCGTGGGTCCACCGAGAAACTGATTGTTTCCAAAGAATCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp TTCTTACTTTTCTACAATCCAGTCTCTCTGTGCCCCTATATCATCTaGGGCATCTTTACTACTGTAGCCATTGCCAGTCAGACCCATCTC +
Preference number: 5 (lower is better)
Translates to: FLLFYNPVSLCPYII*GIFTTVAIASQTHL
Trigger: GAGATGGGTCTGACTGGCAATGGCTACAGTAGTAAAGATGCCGCAGATGATATAGGGGCACAGAGAGACTGGATTGTAGAAAAGTAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGCAATCACTCTGCCTTaGCATCTGGTAGTACCGGAG +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKAITLP*HLVVPE
Trigger: CTCCGGTACTACCAGATGCAAAGGCAGAGTGATTGC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTACCCGTGGTTGGGATaGGTGCACACTCTGATTCTG +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKYPWLG*VHTLIL
Trigger: CAGAATCAGAGTGTGCACCAATCCCAACCACGGGTA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTCAGAAAGGTACTGTTaGACCAGTGGCCAGATCTCT +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANSERYC*TSGQIS
Trigger: AGAGATCTGGCCACTGGTCAAACAGTACCTTTCTGA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp AGACAAGTCAGGTTCTTCATTCATAAAACAAGCACCTGGACTAGCTaGTGTTGTATAGATCTAGCCCAGCTCTCTTCCTGCTATCACTTC +
Preference number: 5 (lower is better)
Translates to: RQVRFFIHKTSTWTS*CCIDLAQLSSCYHF
Trigger: GAAGTGATAGCAGGAAGAGAGCTGGGCTAGATCTATACAACAGCAGCTAGTCCAGGTGCTTGTTTTATGAATGAAGAACCTGACTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAAGTGTCCCACATCCTaGGTTTTAGGTATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANKCPTS*VLGMCS
Trigger: GGAACACATACCTAAAACCAAGGATGTGGGACACTT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGAATCTCTACACCTGGTaGGAGACGAAGACAAGCCTG +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKNLYTW*ETKTSL
Trigger: CAGGCTTGTCTTCGTCTCCAACCAGGTGTAGAGATT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGTCCTTGTGTTCAGCTaGCACACGAGGCCAGCCTTA +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGVLVFS*HTRPAL
Trigger: TAAGGCTGGCCTCGTGTGCAAGCTGAACACAAGGAC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCCAGGATGGTGGTCCTaGTGTTCAGCTTGCACACGA +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGPGWWS*CSACTR
Trigger: TCGTGTGCAAGCTGAACACAAGGACCACCATCCTGG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTCTCCAATACCCGTGGTaGGGATTGGTGCACACTCTG +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGLQYPW*GLVHTL
Trigger: CAGAGTGTGCACCAATCCCAACCACGGGTATTGGAG...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGTCCACTTTGCTCCTTaGGCCTGGCTCACTCTTCTC +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGVHFAP*AWLTLL
Trigger: GAGAAGAGTGAGCCAGGCCAAAGGAGCAAAGTGGAC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTTGTTACTTTCCACATaGTCTGCCCTCCATGGAACA +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANLLLST*SALHGT
Trigger: TGTTCCATGGAGGGCAGACAATGTGGAAAGTAACAA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGACATCACCTTCTCTCTaGGTCCGTGTTTCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKTSPSL*VRVSLV
Trigger: CACCAGAGAAACACGGACCAAGAGAGAAGGTGATGT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATATCACAGTATTTTACTaGGTTGAAGGTAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANITVFY*VEGRPP
Trigger: TGGGGGCCTACCTTCAACCAAGTAAAATACTGTGAT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp TTCTGTAACCTTTCAAGTCTTCTAAGCTCTTCACTCAAGAGGCTCTaGAGCTCTAGCTTTTCCAGAATAAGTTCACACTGTCTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: FCNLSSLLSSSLKRL*SSSFSRISSHCLWY
Trigger: GTACCAGAGACAGTGTGAACTTATTCTGGAAAAGCTAGAGCTGCAGAGCCTCTTGAGTGAAGAGCTTAGAAGACTTGAAAGGTTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000458674.2
ENST00000619706.5
CDS-3UTR CAA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATCCCCGATTTCCATGTaGGTCTCAAACAGAGTCATG +
Preference number: 5 (lower is better)
Translates to: KPETSLTVFHLYRTINWPSPISM*VSNRVM
Trigger: CATGACTCTGTTTGAGACCAACATGGAAATCGGGGA...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTCCCCGATTTCCATGTaGGTCTCAAACAGAGTCATG +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSPISM*VSNRVM
Trigger: CATGACTCTGTTTGAGACCAACATGGAAATCGGGGA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TGCCTTAAGCTCTATACCATCTATCTACTTGGTAAAGTGAAATATCCCCCTCTTAAAGGGACTGGAGAATaGTCAAGGCTGACCTTCGCA +
Preference number: 5 (lower is better)
Translates to: CLKLYTIYLLGKVKYPPLKGTGE*SRLTFA
Trigger: TGCGAAGGTCAGCCTTGACAATTCTCCAGTCCCTTT...AAGAGGGGGATATTTCACTTTACCAAGTAGATAGATGGTATAGAGCTTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp CCTGAAGTTTGTCTACCCTTCTCAATTCCAAAAATCCATTCTTGTCAATGGTTATGTAGCATCAGTCCTTaGAATCCCACCAGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: PEVCLPFSIPKIHSCQWLCSISP*NPTSQH
Trigger: GTGCTGGCTGGTGGGATTCAAAGGACTGATGCTACA...TAACCATTGACAAGAATGGATTTTTGGAATTGAGAAGGGTAGACAAACTTCAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAGCAACACTTATGGTTaGTTGCTCCATTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANSNTYG*LLHCFM
Trigger: CATGAAGCAATGGAGCAACAAACCATAAGTGTTGCT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAACCCAATGTCCACTTaGCTCCTTTGGCCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGNPMST*LLWPGS
Trigger: TGAGCCAGGCCAAAGGAGCAAAGTGGACATTGGGTT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATGAAACCTCTTCCTTTTaGTCTCCCTCACAAGTAAGA +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANETSSF*SPSQVR
Trigger: TCTTACTTGTGAGGGAGACAAAAAGGAAGAGGTTTC...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGTCAGAAAGGTACTGTTaGACCAGTGGCCAGATCTCT +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSERYC*TSGQIS
Trigger: AGAGATCTGGCCACTGGTCAAACAGTACCTTTCTGA...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 90 bp AGAACAGTTCTGAGGCTCAGAAAGTCTTTAAATTGCCTGGAACATTaGAGATTATTATCCAGATCAACTGCCACTGTAGGGCCTAAATCC +
Preference number: 5 (lower is better)
Translates to: RTVLRLRKSLNCLEH*RLLSRSTATVGPKS
Trigger: GGATTTAGGCCCTACAGTGGCAGTTGATCTGGATAATAATCTGCAATGTTCCAGGCAATTTAAAGACTTTCTGAGCCTCAGAACTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS-3UTR CAA 90 bp CCTGAAGTTTGTCTACCCTTCTCAATTCCAAAAATCCATTCTTGTCAATGGTTAGAACCTTCACCAGACTaGTTCGAATCACTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: PEVCLPFSIPKIHSCQWLEPSPD*FESLSQ
Trigger: CTGGGACAGTGATTCGAACAAGTCTGGTGAAGGTTC...TAACCATTGACAAGAATGGATTTTTGGAATTGAGAAGGGTAGACAAACTTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGAACCTTCACCAGACTaGTTCGAATCACTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGEPSPD*FESLSQ
Trigger: CTGGGACAGTGATTCGAACAAGTCTGGTGAAGGTTC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAATCTCTACACCTGGTaGGAGACGAAGACAAGCCTG +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGNLYTW*ETKTSL
Trigger: CAGGCTTGTCTTCGTCTCCAACCAGGTGTAGAGATT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCAAAAGGGCTTCCACCGTaGCATTACAATCCCGTAAAT +
Preference number: 5 (lower is better)
Translates to: KPETSLTVFHLYRTINWPKGLPP*HYNPVN
Trigger: ATTTACGGGATTGTAATGCAACGGTGGAAGCCCTTT...TGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGATACATTCCAAACACTaGAGGGCACAAGCTAGCCAA +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKIHSKH*RAQASQ
Trigger: TTGGCTAGCTTGTGCCCTCAAGTGTTTGGAATGTAT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATAACACTTATGGTTTGTaGCTCCATTGCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANNTYGL*LHCFMD
Trigger: ATCCATGAAGCAATGGAGCAACAAACCATAAGTGTT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGATCACAGTATTTTACTaGGTTGAAGGTAGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKITVFY*VEGRPP
Trigger: TGGGGGCCTACCTTCAACCAAGTAAAATACTGTGAT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 90 bp ACTGTAGGGCCTAAATCCCTAACAATGTACTGTATATGCTGTGCTTaGTTGTCTATGAGAAAAAGAACTCATCACCATCTAAGGCCCATG +
Preference number: 5 (lower is better)
Translates to: TVGPKSLTMYCICCA*LSMRKRTHHHLRPM
Trigger: CATGGGCCTTAGATGGTGATGAGTTCTTTTTCTCATAGACAATCAAGCACAGCATATACAGTACATTGTTAGGGATTTAGGCCCTACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 90 bp GCACACTCGCCAAACACTGCCATCTGTACTTGTTACGACATACAATaGAATGCATCAGTTAACAAGTATATACAAATGTTTGGCCTTCCA +
Preference number: 5 (lower is better)
Translates to: AHSPNTAICTCYDIQ*NASVNKYIQMFGLP
Trigger: TGGAAGGCCAAACATTTGTATATACTTGTTAACTGATGCATTGCATTGTATGTCGTAACAAGTACAGATGGCAGTGTTTGGCGAGTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS-3UTR CAA 90 bp GCTACTGTTGCCTATCAGATTTATGAGCATGAAAATGCCTTAAGCTCTATACCAAAGTGTCCCACATCCTaGGTTTTAGGTATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: ATVAYQIYEHENALSSIPKCPTS*VLGMCS
Trigger: GGAACACATACCTAAAACCAAGGATGTGGGACACTT...TGGTATAGAGCTTAAGGCATTTTCATGCTCATAAATCTGATAGGCAACAGTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp GATTGTTCAAAACTAAGATGCAAAGTGAAGGTGGAGCTTGCAAGATATTTTCTTAATCTCTACACCTGGTaGGAGACGAAGACAAGCCTG +
Preference number: 5 (lower is better)
Translates to: DCSKLRCKVKVELARYFLNLYTW*ETKTSL
Trigger: CAGGCTTGTCTTCGTCTCCAACCAGGTGTAGAGATT...AAGAAAATATCTTGCAAGCTCCACCTTCACTTTGCATCTTAGTTTTGAACAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATTTACTTGGATGTAATTaGCTTTCAGGACTATCTCCA +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANLLGCN*LSGLSP
Trigger: TGGAGATAGTCCTGAAAGCAAATTACATCCAAGTAA...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp CCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATTAATTGGCCATTTATCTTCGAATTCCTTTaGGACCTCCTCATCCATGAT +
Preference number: 5 (lower is better)
Translates to: PETSLTVFHLYRTINWPFIFEFL*DLLIHD
Trigger: ATCATGGATGAGGAGGTCCAAAAGGAATTCGAAGAT...AAATGGCCAATTAATGGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGATCTTCGAATTCCTTTaGGACCTCCTCATCCATGAT +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKIFEFL*DLLIHD
Trigger: ATCATGGATGAGGAGGTCCAAAAGGAATTCGAAGAT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGTCCTATCATGCTCTTaGAGGCTATTGAACTCATCA +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKVLSCS*RLLNSS
Trigger: TGATGAGTTCAATAGCCTCAAAGAGCATGATAGGAC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGAGCAACACTTATGGTTaGTTGCTCCATTGCTTCATG +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKSNTYG*LLHCFM
Trigger: CATGAAGCAATGGAGCAACAAACCATAAGTGTTGCT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAGGCTGCGTCTCTTCTaGTTCTACGCTGGGAAATTT +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGRLRLF*FYAGKF
Trigger: AAATTTCCCAGCGTAGAACAAGAAGAGACGCAGCCT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGGTGAAGAGGGATTCTTaGGAAACAATCAGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKVKRDS*ETISFS
Trigger: CGAGAAACTGATTGTTTCCAAAGAATCCCTCTTCAC...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp TTAGAAAGCCTTAAGGGGGAGCCAGTATTCAGAGTGATCCTCAATATGGCCAATATAGAAAGACAAAGCTaGAGGTTATCTATTCTGACC +
Preference number: 5 (lower is better)
Translates to: LESLKGEPVFRVILNMANIERQS*RLSILT
Trigger: GGTCAGAATAGATAACCTCAAGCTTTGTCTTTCTAT...ATTGGCCATATTGAGGATCACTCTGAATACTGGCTCCCCCTTAAGGCTTTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 90 bp AAAATCTTCGAATTCCTTTTGGACCTCCTCATCCATGATGATCCCTaGGGACTGCTCATTATTTACTTGGATGTAATTTGCTTTCAGGAC +
Preference number: 5 (lower is better)
Translates to: KIFEFLLDLLIHDDP*GLLIIYLDVICFQD
Trigger: GTCCTGAAAGCAAATTACATCCAAGTAAATAATGAGCAGTCCTCAGGGATCATCATGGATGAGGAGGTCCAAAAGGAATTCGAAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS-3UTR CAA 90 bp GTGGCCAGATCTCTAAGAACATCATGGAATTGTAAGGATACCTCTCAAAGAAAGACCAACCAGTGTAACTaGATCGCTATTCATCTTGAA +
Preference number: 5 (lower is better)
Translates to: VARSLRTSWNCKDTSQRKTNQCN*IAIHLE
Trigger: TTCAAGATGAATAGCGATCAAGTTACACTGGTTGGT...CTTTCTTTGAGAGGTATCCTTACAATTCCATGATGTTCTTAGAGATCTGGCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCTGCTCAAAGTCAGCCTaGATCACAAACACATGCTTG +
Preference number: 5 (lower is better)
Translates to: SYISKPETSLTVFHLYRTCSKSA*ITNTCL
Trigger: CAAGCATGTGTTTGTGATCAAGGCTGACTTTGAGCA...GGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAAAGGGCTTCCACCGTaGCATTACAATCCCGTAAAT +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGKGLPP*HYNPVN
Trigger: ATTTACGGGATTGTAATGCAACGGTGGAAGCCCTTT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCATACATTCCAAACACTaGAGGGCACAAGCTAGCCAA +
Preference number: 5 (lower is better)
Translates to: SYISKPETSLTVFHLYRTIHSKH*RAQASQ
Trigger: TTGGCTAGCTTGTGCCCTCAAGTGTTTGGAATGTAT...GGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTATACATTCCAAACACTaGAGGGCACAAGCTAGCCAA +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGIHSKH*RAQASQ
Trigger: TTGGCTAGCTTGTGCCCTCAAGTGTTTGGAATGTAT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGTCCTATCATGCTCTTaGAGGCTATTGAACTCATCA +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGVLSCS*RLLNSS
Trigger: TGATGAGTTCAATAGCCTCAAAGAGCATGATAGGAC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTGAAACCTCTTCCTTTTaGTCTCCCTCACAAGTAAGA +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGETSSF*SPSQVR
Trigger: TCTTACTTGTGAGGGAGACAAAAAGGAAGAGGTTTC...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 90 bp ATTACAATTCTATTTCTATGTGACAGTCTTCTAACTATTGAAAGTTaGCTGTCATGTCCTTCCTCAGGGTTCTCCATGCTAACCATGTAT +
Preference number: 5 (lower is better)
Translates to: ITILFLCDSLLTIES*LSCPSSGFSMLTMY
Trigger: ATACATGGTTAGCATGGAGAACCCTGAGGAAGGACATGACAGCCAACTTTCAATAGTTAGAAGACTGTCACATAGAAATAGAATTGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS-3UTR CAA 90 bp CCTGAAGTTTGTCTACCCTTCTCAATTCCAAAAATCCATTCTTGTCAATGGTTAACCAACCAGTGTAACTaGATCGCTATTCATCTTGAA +
Preference number: 5 (lower is better)
Translates to: PEVCLPFSIPKIHSCQWLTNQCN*IAIHLE
Trigger: TTCAAGATGAATAGCGATCAAGTTACACTGGTTGGT...TAACCATTGACAAGAATGGATTTTTGGAATTGAGAAGGGTAGACAAACTTCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTGCTCTTTGAGGCTATaGAACTCATCAATACAGCAA +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGCSLRL*NSSIQQ
Trigger: TTGCTGTATTGATGAGTTCAATAGCCTCAAAGAGCA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTAACACTTATGGTTTGTaGCTCCATTGCTTCATGGAT +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGNTYGL*LHCFMD
Trigger: ATCCATGAAGCAATGGAGCAACAAACCATAAGTGTT...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 90 bp ATGAAATCAAACCAATCTAAACTGTCATCTCTGTTATTTTTGTGCTaGGCTGAATGTTTCCTACTTGTTGATCTATTAGGCTCCAGATGC +
Preference number: 5 (lower is better)
Translates to: MKSNQSKLSSLLFLC*AECFLLVDLLGSRC
Trigger: GCATCTGGAGCCTAATAGATCAACAAGTAGGAAACATTCAGCTCAGCACAAAAATAACAGAGATGACAGTTTAGATTGGTTTGATTTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 90 bp CTATTTAAGCTCAACATTTGGCAGAGTGCCTTGCAAAACAGTAGGTaGTCAAAACATATAAGGACGCCTTATACTTACTATTCTATACTG +
Preference number: 5 (lower is better)
Translates to: LFKLNIWQSALQNSR*SKHIRTPYTYYSIL
Trigger: CAGTATAGAATAGTAAGTATAAGGCGTCCTTATATGTTTTGATCACCTACTGTTTTGCAAGGCACTCTGCCAAATGTTGAGCTTAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS-3UTR CAA 90 bp AGTTATATTTCAAAACCTGAGACCTCCTTAACAGTTTTCCACTTATACAGGACCTTACTTGGATGTAATTaGCTTTCAGGACTATCTCCA +
Preference number: 5 (lower is better)
Translates to: SYISKPETSLTVFHLYRTLLGCN*LSGLSP
Trigger: TGGAGATAGTCCTGAAAGCAAATTACATCCAAGTAA...GGTCCTGTATAAGTGGAAAACTGTTAAGGAGGTCTCAGGTTTTGAAATATAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316068.7
CDS-3UTR CAA 90 bp AAGAATCTGAAGTACAAAATGTTGGCTCAAGAAAGAAAGGACAACTCAGAAGGTTTACTTGGATGTAATTaGCTTTCAGGACTATCTCCA +
Preference number: 5 (lower is better)
Translates to: KNLKYKMLAQERKDNSEGLLGCN*LSGLSP
Trigger: TGGAGATAGTCCTGAAAGCAAATTACATCCAAGTAA...ACCTTCTGAGTTGTCCTTTCTTTCTTGAGCCAACATTTTGTACTTCAGATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 72 bp TTCTCAAGTCGCCGCTGCACGACGTCTGGCCGGCGCTaGAGCGGGGGTCTGCGCTCTCCCGAGCGGCCGCGC +
Preference number: 6 (lower is better)
Translates to: FSSRRCTTSGRR*SGGLRSPERPR
Trigger: GCGCGGCCGCTCGGGAGAGCGCAGACCCCCGCTCCAGCGCCGGCCAGACGTCGTGCAGCGGCGACTTGAGAA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505485.1
CDS GCA 72 bp GTTCGTCTCCGGCGCAAGAAGGCTGGTGAGGCGGAGTaGGCGCGTGCACGTGGCCGCTCGAGGCGCCACCGG +
Preference number: 6 (lower is better)
Translates to: VRLRRKKAGEAE*ARARGRSRRHR
Trigger: CCGGTGGCGCCTCGAGCGGCCACGTGCACGCGCGCACTCCGCCTCACCAGCCTTCTTGCGCCGGAGACGAAC
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000619706.5
CDS TCA 72 bp CAGGCAGCGGGTTCGTCTCCGGCGCAAGAAGGCTGGTaGGGCGGAGTGCGCGCGTGCACGTGGCCGCTCGAG +
Preference number: 6 (lower is better)
Translates to: QAAGSSPAQEGW*GGVRACTWPLE
Trigger: CTCGAGCGGCCACGTGCACGCGCGCACTCCGCCTCACCAGCCTTCTTGCGCCGGAGACGAACCCGCTGCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000619706.5
CDS CCA 72 bp GCGGGAGCCCATCTTGCTGGCTGCCGAGGCCCTCGCTaGAGGAGGAGGGTCAGAACTCGGGTGCAGCCAATC +
Preference number: 6 (lower is better)
Translates to: AGAHLAGCRGPR*RRRVRTRVQPI
Trigger: GATTGGCTGCACCCGAGTTCTGACCCTCCTCCTCCAGCGAGGGCCTCGGCAGCCAGCAAGATGGGCTCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368478.2
ENST00000505485.1
CDS GCA 72 bp GAGTCCATTCCGGGAGCGGGAGCCCATCTTGCTGGCTaGCGAGGCCCTCGCTGGAGGAGGAGGGTCAGAACT +
Preference number: 6 (lower is better)
Translates to: ESIPGAGAHLAG*RGPRWRRRVRT
Trigger: AGTTCTGACCCTCCTCCTCCAGCGAGGGCCTCGGCAGCCAGCAAGATGGGCTCCCGCTCCCGGAATGGACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368478.2
ENST00000505485.1
CDS GCA 72 bp AGTTTCCGAGTCCATTCCGGGAGCGGGAGCCCATCTTaGTGGCTGCCGAGGCCCTCGCTGGAGGAGGAGGGT +
Preference number: 6 (lower is better)
Translates to: SFRVHSGSGSPS*WLPRPSLEEEG
Trigger: ACCCTCCTCCTCCAGCGAGGGCCTCGGCAGCCAGCAAGATGGGCTCCCGCTCCCGGAATGGACTCGGAAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368478.2
ENST00000505485.1
CDS CAA 90 bp GGTTCTGCAGAAACAGTGGCTGTGTCAGAAGTCGCCGGGAACGCGTaGCTCCCGAGGCCGAAGGGCCCAGAGAGCTCCAGCCAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: GSAETVAVSEVAGNA*LPRPKGPESSSQAA
Trigger: CGCTGCCTGGCTGGAGCTCTCTGGGCCCTTCGGCCTCGGGAGCAACGCGTTCCCGGCGACTTCTGACACAGCCACTGTTTCTGCAGAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425154.6
ENST00000619706.5
CDS CAA 72 bp CGGACTCCTGGGGGTCGTACTGGCCTTTGGGGTTCGTaGCTGCCAGGATGGTGGTCCTTGTGTTCAGCTTGC +
Preference number: 6 (lower is better)
Translates to: RTPGGRTGLWGS*LPGWWSLCSAC
Trigger: GCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CAA 90 bp TCACAGACACGGACTCCTGGGGGTCGTACTGGCCTTTGGGGTTCGTaGCTGCCAGGATGGTGGTCCTTGTGTTCAGCTTGCACACGAGGC +
Preference number: 6 (lower is better)
Translates to: SQTRTPGGRTGLWGS*LPGWWSLCSACTRG
Trigger: GCCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316316.10
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS GCA 72 bp CTCCTGGGGGTCGTACTGGCCTTTGGGGTTCGTTGCTaGCAGGATGGTGGTCCTTGTGTTCAGCTTGCACAC +
Preference number: 6 (lower is better)
Translates to: LLGVVLAFGVRC*QDGGPCVQLAH
Trigger: GTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CCA 72 bp CGTACTGGCCTTTGGGGTTCGTTGCTGCCAGGATGGTaGTCCTTGTGTTCAGCTTGCACACGAGGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: RTGLWGSLLPGW*SLCSACTRGQP
Trigger: AGGCTGGCCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000505485.1
ENST00000619706.5
CDS CCA 72 bp TCACAGACACGGACTCCTGGGGGTCGTACTGGCCTTTaGGGTTCGTTGCTGCCAGGATGGTGGTCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: SQTRTPGGRTGL*GSLLPGWWSLC
Trigger: ACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CCA 72 bp GCAATGTTCACAGACACGGACTCCTGGGGGTCGTACTaGCCTTTGGGGTTCGTTGCTGCCAGGATGGTGGTC +
Preference number: 6 (lower is better)
Translates to: AMFTDTDSWGSY*PLGFVAARMVV
Trigger: GACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGTGAACATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CAA 72 bp TTCACAGACACGGACTCCTGGGGGTCGTACTGGCCTTaGGGGTTCGTTGCTGCCAGGATGGTGGTCCTTGTG +
Preference number: 6 (lower is better)
Translates to: FTDTDSWGSYWP*GFVAARMVVLV
Trigger: CACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CAA 90 bp TCACAGACACGGACTCCTGGGGGTCGTACTGGCCTTTGGGGTTCGTaGCTGCCAGGATGGTGGTCCTTGTGTTCAGCTTGCACACGAGGT +
Preference number: 6 (lower is better)
Translates to: SQTRTPGGRTGLWGS*LPGWWSLCSACTRG
Trigger: ACCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368478.2
CDS CAA 90 bp AGGGCAATGTTCACAGACACGGACTCCTGGGGGTCGTACTGGCCTTaGGGGTTCGTTGCTGCCAGGATGGTGGTCCTTGTGTTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RAMFTDTDSWGSYWP*GFVAARMVVLVFSL
Trigger: CAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACCCCCAGGAGTCCGTGTCTGTGAACATTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CCA 72 bp GACACGCATTGGAGCTGTGGTTGTAGGAGGGGAGCTTaGGCCTCTCTCACCTCGGTTCTTCCTTTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: DTHWSCGCRRGA*ASLTSVLPFRR
Trigger: CCTCCTGAAAGGAAGAACCGAGGTGAGAGAGGCCCAAGCTCCCCTCCTACAACCACAGCTCCAATGCGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CAA 72 bp GGCCTTTGGGGTTCGTTGCTGCCAGGATGGTGGTCCTaGTGTTCAGCTTGCACACGAGGTTTGTTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: GLWGSLLPGWWS*CSACTRGLFSA
Trigger: GGCGGAGAACAAACCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368478.2
CDS CAA 90 bp CAGCCGAATGGTGGTCCGGGCAGCGTTCCGGCAATCACTCTGCCTTaGCATCTGGTAGTACCGGAGAAGAACCTGATTGCCCACATCAGA +
Preference number: 6 (lower is better)
Translates to: QPNGGPGSVPAITLP*HLVVPEKNLIAHIR
Trigger: TCTGATGTGGGCAATCAGGTTCTTCTCCGGTACTACCAGATGCAAAGGCAGAGTGATTGCCGGAACGCTGCCCGGACCACCATTCGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 72 bp TCCAGCATTCTGTCTGGGCTATGTACAGGAGTGGACTaGGGATGGGAAGGGACTGTGCACTGTGCAGGCACC +
Preference number: 6 (lower is better)
Translates to: SSILSGLCTGVD*GWEGTVHCAGT
Trigger: GGTGCCTGCACAGTGCACAGTCCCTTCCCATCCTCAGTCCACTCCTGTACATAGCCCAGACAGAATGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 72 bp GAGGATGGGAAGGGACTGTGCACTGTGCAGGCACCCTaGTGCTATTTCTGCACAACTTCTGGGCCCTCTCTT +
Preference number: 6 (lower is better)
Translates to: EDGKGLCTVQAP*CYFCTTSGPSL
Trigger: AAGAGAGGGCCCAGAAGTTGTGCAGAAATAGCACCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 72 bp TGGTGGCTGCTGCGACACCTCCTTTGTCTCACCCTGTaGCTGACTGGAGATCTGGTTTCCTGGGGTAGATGT +
Preference number: 6 (lower is better)
Translates to: WWLLRHLLCLTL*LTGDLVSWGRC
Trigger: ACATCTACCCCAGGAAACCAGATCTCCAGTCAGCCACAGGGTGAGACAAAGGAGGTGTCGCAGCAGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 72 bp GGTCGTACTGGCCTTTGGGGTTCGTTGCTGCCAGGATaGTGGTCCTTGTGTTCAGCTTGCACACGAGGTTTG +
Preference number: 6 (lower is better)
Translates to: GRTGLWGSLLPG*WSLCSACTRGL
Trigger: CAAACCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368478.2
CDS CAA 72 bp GTCCGTGTTTCTCTGGTGGCTGCTGCGACACCTCCTTaGTCTCACCCTGTGGCTGACTGGAGATCTGGTTTC +
Preference number: 6 (lower is better)
Translates to: VRVSLVAAATPP*SHPVADWRSGF
Trigger: GAAACCAGATCTCCAGTCAGCCACAGGGTGAGACAAAGGAGGTGTCGCAGCAGCCACCAGAGAAACACGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CAA 90 bp GGTCGTACTGGCCTTTGGGGTTCGTTGCTGCCAGGATGGTGGTCCTaGTGTTCAGCTTGCACACGAGGTTTGTTCTCCGCCTTTGTCCTA +
Preference number: 6 (lower is better)
Translates to: GRTGLWGSLLPGWWS*CSACTRGLFSAFVL
Trigger: TAGGACAAAGGCGGAGAACAAACCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAACCCCAAAGGCCAGTACGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368478.2
CDS TCA 72 bp AGGCCAAGGCAGGAGGGTCACTTGAGCCCGGAAATGTaGGACCAGCCTGGGCAAGACTCCATGTCTACAAAA +
Preference number: 6 (lower is better)
Translates to: RPRQEGHLSPEM*DQPGQDSMSTK
Trigger: TTTTGTAGACATGGAGTCTTGCCCAGGCTGGTCTCACATTTCCGGGCTCAAGTGACCCTCCTGCCTTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 72 bp AGGAGTGGACTGAGGATGGGAAGGGACTGTGCACTGTaGAGGCACCCTGGTGCTATTTCTGCACAACTTCTG +
Preference number: 6 (lower is better)
Translates to: RSGLRMGRDCAL*RHPGAISAQLL
Trigger: CAGAAGTTGTGCAGAAATAGCACCAGGGTGCCTGCACAGTGCACAGTCCCTTCCCATCCTCAGTCCACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 72 bp CTTCTGCTAATCGTATCAAGCTTTCCAACAGCCGAATaGTGGTCCGGGCAGCGTTCCGGCAATCACTCTGCC +
Preference number: 6 (lower is better)
Translates to: LLLIVSSFPTAE*WSGQRSGNHSA
Trigger: GGCAGAGTGATTGCCGGAACGCTGCCCGGACCACCATTCGGCTGTTGGAAAGCTTGATACGATTAGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CAA 72 bp TTCTCCTCTGACCCGTGTTCCTGTAGCATCAGTCCTTaGAATCCCACCAGCCAGCACCATGGCCACAGCAAG +
Preference number: 6 (lower is better)
Translates to: FSSDPCSCSISP*NPTSQHHGHSK
Trigger: CTTGCTGTGGCCATGGTGCTGGCTGGTGGGATTCAAAGGACTGATGCTACAGGAACACGGGTCAGAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000619706.5
CDS CAA 72 bp CTAACCTCTGACCCGTGTTCCTGTAGCATCAGTCCTTaGAATCCCACCAGCCAGCACCATGGCCACAGCAAG +
Preference number: 6 (lower is better)
Translates to: LTSDPCSCSISP*NPTSQHHGHSK
Trigger: CTTGCTGTGGCCATGGTGCTGGCTGGTGGGATTCAAAGGACTGATGCTACAGGAACACGGGTCAGAGGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 72 bp AAACCAGGATCAGGTCAAATCGACTTAAGAGTGGGCTaGCGAGGGCAATGTTCACAGACACGGACTCCTGGG +
Preference number: 6 (lower is better)
Translates to: KPGSGQIDLRVG*RGQCSQTRTPG
Trigger: CCCAGGAGTCCGTGTCTGTGAACATTGCCCTCGGCAGCCCACTCTTAAGTCGATTTGACCTGATCCTGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS CCA 72 bp CTGCTAATCGTATCAAGCTTTCCAACAGCCGAATGGTaGTCCGGGCAGCGTTCCGGCAATCACTCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: LLIVSSFPTAEW*SGQRSGNHSAF
Trigger: AAAGGCAGAGTGATTGCCGGAACGCTGCCCGGACCACCATTCGGCTGTTGGAAAGCTTGATACGATTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 72 bp GAATGTTTCCTACTTGTTGATCTATTAGGCTCCAGATaGGGTGGGGGATCTAGAACTGGGCTTCCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: ECFLLVDLLGSR*GGGSRTGLPSG
Trigger: CCCCGAGGGAAGCCCAGTTCTAGATCCCCCACCGCATCTGGAGCCTAATAGATCAACAAGTAGGAAACATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 72 bp TCTCTCCTGGTGATGGAAGCAACCCAATGTCCACTTTaGTCCTTTGGCCTGGCTCACTCTTCTCCTTACCCT +
Preference number: 6 (lower is better)
Translates to: SLLVMEATQCPL*SFGLAHSSPYP
Trigger: AGGGTAAGGAGAAGAGTGAGCCAGGCCAAAGGAGCAAAGTGGACATTGGGTTGCTTCCATCACCAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 72 bp TGGTGCTATTTCTGCACAACTTCTGGGCCCTCTCTTTaGACAGCTTCTGCAGGTTCCTGGGGACATGATGAG +
Preference number: 6 (lower is better)
Translates to: WCYFCTTSGPSL*TASAGSWGHDE
Trigger: CTCATCATGTCCCCAGGAACCTGCAGAAGCTGTGCAAAGAGAGGGCCCAGAAGTTGTGCAGAAATAGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CAA 72 bp TTCGTTGCTGCCAGGATGGTGGTCCTTGTGTTCAGCTaGCACACGAGGCCAGCCTTAGCAACACTTATGGTT +
Preference number: 6 (lower is better)
Translates to: FVAARMVVLVFS*HTRPALATLMV
Trigger: AACCATAAGTGTTGCTAAGGCTGGCCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000505485.1
ENST00000619706.5
CDS CAA 90 bp ATTGCAGGCTCTTCCACTTGCGCAAGGGATTTCGGTCTCTTTCTTTaGGGTGAGTCCAGCATTCTGTCTGGGCTATGTACAGGAGTGGAC +
Preference number: 6 (lower is better)
Translates to: IAGSSTCARDFGLFL*GESSILSGLCTGVD
Trigger: GTCCACTCCTGTACATAGCCCAGACAGAATGCTGGACTCACCCAAAAGAAAGAGACCGAAATCCCTTGCGCAAGTGGAAGAGCCTGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 72 bp GCACACCCAGTCTCGTTCCCAAGCTCTAATTCAGGCTaGATAATCCTCTTCTCAGGGGCACACATCACCTTC +
Preference number: 6 (lower is better)
Translates to: AHPVSFPSSNSG*IILFSGAHITF
Trigger: GAAGGTGATGTGTGCCCCTGAGAAGAGGATTATTCAGCCTGAATTAGAGCTTGGGAACGAGACTGGGTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 72 bp ATTGAGGACCCTCAGAAGACAGCAGACTACAATCAGTaGCTCCAATCACGGTGTCACCAGCACAGAGCAGAG +
Preference number: 6 (lower is better)
Translates to: IEDPQKTADYNQ*LQSRCHQHRAE
Trigger: CTCTGCTCTGTGCTGGTGACACCGTGATTGGAGTCACTGATTGTAGTCTGCTGTCTTCTGAGGGTCCTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp TTAGTCTCCCCAGTGAGGAGAGGGAACATGATGAGTTaGCAGGGACAAAGGAGAACTCAGGACCAGTCTGGT +
Preference number: 6 (lower is better)
Translates to: LVSPVRRGNMMS*QGQRRTQDQSG
Trigger: ACCAGACTGGTCCTGAGTTCTCCTTTGTCCCTGTCAACTCATCATGTTCCCTCTCCTCACTGGGGAGACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 72 bp GCCTTTGCATCTGGTAGTACCGGAGAAGAACCTGATTaGCCACATCAGACAGTGTGGGCTGCAGATTCCTTA +
Preference number: 6 (lower is better)
Translates to: AFASGSTGEEPD*PHQTVWAADSL
Trigger: TAAGGAATCTGCAGCCCACACTGTCTGATGTGGGCAATCAGGTTCTTCTCCGGTACTACCAGATGCAAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 72 bp GATGCCTCAGAAGAAGCTGAGCCTATGTCTGCACCATaGTTCCTGTACAGCCTGTGGAACTGTGAGCCAATT +
Preference number: 6 (lower is better)
Translates to: DASEEAEPMSAP*FLYSLWNCEPI
Trigger: AATTGGCTCACAGTTCCACAGGCTGTACAGGAAGCATGGTGCAGACATAGGCTCAGCTTCTTCTGAGGCATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CCA 72 bp TCTTTTCTTGAAGGTGTGACCTGCAGCAGCACCCCATaGCAGATGGCACATTTGCTATCTACCAGCAGAAGG +
Preference number: 6 (lower is better)
Translates to: SFLEGVTCSSTP*QMAHLLSTSRR
Trigger: CCTTCTGCTGGTAGATAGCAAATGTGCCATCTGCCATGGGGTGCTGCTGCAGGTCACACCTTCAAGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 72 bp TTCGTTGCTGCCAGGATGGTGGTCCTTGTGTTCAGCTaGCACACGAGGTTTGTTCTCCGCCTTTGTCCTAAT +
Preference number: 6 (lower is better)
Translates to: FVAARMVVLVFS*HTRFVLRLCPN
Trigger: ATTAGGACAAAGGCGGAGAACAAACCTCGTGTGCAAGCTGAACACAAGGACCACCATCCTGGCAGCAACGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368478.2
CDS TCA 72 bp CACTTGCGCAAGGGATTTCGGTCTCTTTCTTTTGGGTaGGTCCAGCATTCTGTCTGGGCTATGTACAGGAGT +
Preference number: 6 (lower is better)
Translates to: HLRKGFRSLSFG*VQHSVWAMYRS
Trigger: ACTCCTGTACATAGCCCAGACAGAATGCTGGACTCACCCAAAAGAAAGAGACCGAAATCCCTTGCGCAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CAA 72 bp TGCTTTCAGGACTATCTCCACTTCACAGCGCACATCTaGCTGAAAGGGCTTCCACCGTTGCATTACAATCCC +
Preference number: 6 (lower is better)
Translates to: CFQDYLHFTAHI*LKGLPPLHYNP
Trigger: GGGATTGTAATGCAACGGTGGAAGCCCTTTCAGCAAGATGTGCGCTGTGAAGTGGAGATAGTCCTGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS CAA 90 bp GTTCGAATCACTGTCCCAGTGACAGATAAAAAGTGTCCCACATCCTaGGTTTTAGGTATGTGTTCCCTCACCAGCTCAGGACAGACAGGC +
Preference number: 6 (lower is better)
Translates to: VRITVPVTDKKCPTS*VLGMCSLTSSGQTG
Trigger: GCCTGTCTGTCCTGAGCTGGTGAGGGAACACATACCTAAAACCAAGGATGTGGGACACTTTTTATCTGTCACTGGGACAGTGATTCGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000425154.6
ENST00000619706.5
CDS GCA 72 bp TTTACCATGTCATGTGCCTGCTCCCCCTCTCCCTTCTaGCATGATTGTAAACTTCCTGATGCCTCAGAAGAA +
Preference number: 6 (lower is better)
Translates to: FTMSCACSPSPF*HDCKLPDASEE
Trigger: TTCTTCTGAGGCATCAGGAAGTTTACAATCATGGCAGAAGGGAGAGGGGGAGCAGGCACATGACATGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 72 bp TTCACAGCGCACATCTTGCTGAAAGGGCTTCCACCGTaGCATTACAATCCCGTAAATAGTGAGGTCATCACC +
Preference number: 6 (lower is better)
Translates to: FTAHILLKGLPP*HYNPVNSEVIT
Trigger: GGTGATGACCTCACTATTTACGGGATTGTAATGCAACGGTGGAAGCCCTTTCAGCAAGATGTGCGCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS CAA 90 bp TATCTCCACTTCACAGCGCACATCTTGCTGAAAGGGCTTCCACCGTaGCATTACAATCCCGTAAATAGTGAGGTCATCACCAGATTTGCA +
Preference number: 6 (lower is better)
Translates to: YLHFTAHILLKGLPP*HYNPVNSEVITRFA
Trigger: TGCAAATCTGGTGATGACCTCACTATTTACGGGATTGTAATGCAACGGTGGAAGCCCTTTCAGCAAGATGTGCGCTGTGAAGTGGAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000619706.5
CDS CAA 90 bp GGGTTTCAAGTACCCTCCCAATTCAGGTATCGGCCAATGAAAACATaGAGGACCCTCAGAAGACAGCAGACTACAATCAGTGACTCCAAT +
Preference number: 6 (lower is better)
Translates to: GFQVPSQFRYRPMKT*RTLRRQQTTISDSN
Trigger: ATTGGAGTCACTGATTGTAGTCTGCTGTCTTCTGAGGGTCCTCAATGTTTTCATTGGCCGATACCTGAATTGGGAGGGTACTTGAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 72 bp TCCTGTGGTCAGCACAGATCTTGGTGTAATCTTTGCTaGATATTTGAGGAACTGAGATTTCCCTGTGCCAGG +
Preference number: 6 (lower is better)
Translates to: SCGQHRSWCNLC*IFEELRFPCAR
Trigger: CCTGGCACAGGGAAATCTCAGTTCCTCAAATATGCAGCAAAGATTACACCAAGATCTGTGCTGACCACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS GCA 72 bp TTCTACAATCCAGTCTCTCTGTGCCCCTATATCATCTaGGGCATCTTTACTACTGTAGCCATTGCCAGTCAG +
Preference number: 6 (lower is better)
Translates to: FYNPVSLCPYII*GIFTTVAIASQ
Trigger: CTGACTGGCAATGGCTACAGTAGTAAAGATGCCGCAGATGATATAGGGGCACAGAGAGACTGGATTGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 72 bp ACTGTCCCAGTGACAGATAAAAAGTGTCCCACATCCTaGGTTTTAGGTATGTGTTCCCTCACCAGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: TVPVTDKKCPTS*VLGMCSLTSSG
Trigger: TCCTGAGCTGGTGAGGGAACACATACCTAAAACCAAGGATGTGGGACACTTTTTATCTGTCACTGGGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000425154.6
ENST00000619706.5
CDS CAA 72 bp ACTGAAGCATGGCCAAGAGTACTGACCTCATCAGATTaGGATTTAAATCCCAGCTCCACTGCCCATAGGCTA +
Preference number: 6 (lower is better)
Translates to: TEAWPRVLTSSD*DLNPSSTAHRL
Trigger: TAGCCTATGGGCAGTGGAGCTGGGATTTAAATCCAAATCTGATGAGGTCAGTACTCTTGGCCATGCTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 90 bp TGTCCTTCCTCAGGGTTCTCCATGCTAACCATGTATAGTTCTTCATaGAGTATGGGTTTCAAGTACCCTCCCAATTCAGGTATCGGCCAA +
Preference number: 6 (lower is better)
Translates to: CPSSGFSMLTMYSSS*SMGFKYPPNSGIGQ
Trigger: TTGGCCGATACCTGAATTGGGAGGGTACTTGAAACCCATACTCAATGAAGAACTATACATGGTTAGCATGGAGAACCCTGAGGAAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp GAAACCTCTTCCTTTTTGTCTCCCTCACAAGTAAGATaGGCACACCCAGTCTCGTTCCCAAGCTCTAATTCA +
Preference number: 6 (lower is better)
Translates to: ETSSFLSPSQVR*AHPVSFPSSNS
Trigger: TGAATTAGAGCTTGGGAACGAGACTGGGTGTGCTCATCTTACTTGTGAGGGAGACAAAAAGGAAGAGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 72 bp TTGGAAACAATCAGTTTCTCGGTGGACCCACGGAGCTaGAAAGATTTCCTTTTACTGACACGCATTGGAGCT +
Preference number: 6 (lower is better)
Translates to: LETISFSVDPRS*KDFLLLTRIGA
Trigger: AGCTCCAATGCGTGTCAGTAAAAGGAAATCTTTTCAGCTCCGTGGGTCCACCGAGAAACTGATTGTTTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 72 bp AGGTTCTTCATTCATAAAACAAGCACCTGGACTAGCTaGTGTTGTATAGATCTAGCCCAGCTCTCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: RFFIHKTSTWTS*CCIDLAQLSSC
Trigger: GCAGGAAGAGAGCTGGGCTAGATCTATACAACAGCAGCTAGTCCAGGTGCTTGTTTTATGAATGAAGAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CCA 72 bp GCAGAAGCAACTTTTATAGATTTTCCTAAGAGGCCCTaGGTAGTTTATAGGCACACTCGCCAAACACTGCCA +
Preference number: 6 (lower is better)
Translates to: AEATFIDFPKRP*VVYRHTRQTLP
Trigger: TGGCAGTGTTTGGCGAGTGTGCCTATAAACTACCCAGGGCCTCTTAGGAAAATCTATAAAAGTTGCTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 72 bp TCATGGATACTGGTCCTATCATGCTCTTTGAGGCTATaGAACTCATCAATACAGCAAAGGCCCGCATCTGCA +
Preference number: 6 (lower is better)
Translates to: SWILVLSCSLRL*NSSIQQRPASA
Trigger: TGCAGATGCGGGCCTTTGCTGTATTGATGAGTTCAATAGCCTCAAAGAGCATGATAGGACCAGTATCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000505485.1
ENST00000619706.5
CDS TCA 72 bp ACTGCTATTTTAGTTGCACCAGGTGACACATGGCTGTaGTCTTCAAAGGAGTGGATCAGTTTTGACTTCTGC +
Preference number: 6 (lower is better)
Translates to: TAILVAPGDTWL*SSKEWISFDFC
Trigger: GCAGAAGTCAAAACTGATCCACTCCTTTGAAGATCACAGCCATGTGTCACCTGGTGCAACTAAAATAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS GCA 72 bp AGTTTGCCAATCTGGCTAATGTGCAGGCATGAACCTTaGCGCTTTTATTACTGCCTGAAACCTCTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: SLPIWLMCRHEP*RFYYCLKPLPF
Trigger: AAAAGGAAGAGGTTTCAGGCAGTAATAAAAGCGGCAAGGTTCATGCCTGCACATTAGCCAGATTGGCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 72 bp AGACAAGTCAGGTTCTTCATTCATAAAACAAGCACCTaGACTAGCTGCTGTTGTATAGATCTAGCCCAGCTC +
Preference number: 6 (lower is better)
Translates to: RQVRFFIHKTST*TSCCCIDLAQL
Trigger: GAGCTGGGCTAGATCTATACAACAGCAGCTAGTCCAGGTGCTTGTTTTATGAATGAAGAACCTGACTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 72 bp TCCATTGCTTCATGGATACTGGTCCTATCATGCTCTTaGAGGCTATTGAACTCATCAATACAGCAAAGGCCC +
Preference number: 6 (lower is better)
Translates to: SIASWILVLSCS*RLLNSSIQQRP
Trigger: GGGCCTTTGCTGTATTGATGAGTTCAATAGCCTCAAAGAGCATGATAGGACCAGTATCCATGAAGCAATGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000505485.1
ENST00000619706.5
CDS CAA 90 bp TCCATTGCTTCATGGATACTGGTCCTATCATGCTCTTTGAGGCTATaGAACTCATCAATACAGCAAAGGCCCGCATCTGCAAGAACTAAT +
Preference number: 6 (lower is better)
Translates to: SIASWILVLSCSLRL*NSSIQQRPASARTN
Trigger: ATTAGTTCTTGCAGATGCGGGCCTTTGCTGTATTGATGAGTTCAATAGCCTCAAAGAGCATGATAGGACCAGTATCCATGAAGCAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316316.10
ENST00000505485.1
ENST00000619706.5
CDS TCA 72 bp TTCCAACAGATAGCCTTTGAACCTGTTCCTGAATTTTaGTTTCCTGGTAATCTCTACACCTGGTTGGAGACG +
Preference number: 6 (lower is better)
Translates to: FQQIAFEPVPEF*FPGNLYTWLET
Trigger: CGTCTCCAACCAGGTGTAGAGATTACCAGGAAATCAAAATTCAGGAACAGGTTCAAAGGCTATCTGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000436788.2
ENST00000619706.5
CDS TCA 72 bp CTGGACATAATTATACACTTAAGAGTAATCTTTTCTTaGAGGTGTGACCTGCAGCAGCACCCCATGGCAGAT +
Preference number: 6 (lower is better)
Translates to: LDIIIHLRVIFS*RCDLQQHPMAD
Trigger: ATCTGCCATGGGGTGCTGCTGCAGGTCACACCTTCAAGAAAAGATTACTCTTAAGTGTATAATTATGTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 72 bp CTGAGGCTCAGAAAGTCTTTAAATTGCCTGGAACATTaGAGATTATTATCCAGATCAACTGCCACTGTAGGG +
Preference number: 6 (lower is better)
Translates to: LRLRKSLNCLEH*RLLSRSTATVG
Trigger: CCCTACAGTGGCAGTTGATCTGGATAATAATCTGCAATGTTCCAGGCAATTTAAAGACTTTCTGAGCCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CCA 72 bp GTTGGTCTCAAACAGAGTCATGGCATTAACCACAACTaGGTAATGAGCATCTTCATCCCTTTCCTTCAAGAT +
Preference number: 6 (lower is better)
Translates to: VGLKQSHGINHN*VMSIFIPFLQD
Trigger: ATCTTGAAGGAAAGGGATGAAGATGCTCATTACCCAGTTGTGGTTAATGCCATGACTCTGTTTGAGACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000425154.6
ENST00000505446.1
ENST00000619706.5
CDS CAA 72 bp CTGGGGAACATGTTGAAATATTCCCCGATTTCCATGTaGGTCTCAAACAGAGTCATGGCATTAACCACAACT +
Preference number: 6 (lower is better)
Translates to: LGNMLKYSPISM*VSNRVMALTTT
Trigger: AGTTGTGGTTAATGCCATGACTCTGTTTGAGACCAACATGGAAATCGGGGAATATTTCAACATGTTCCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316068.7
ENST00000316316.10
ENST00000425154.6
ENST00000505446.1
ENST00000619706.5
CDS CAA 72 bp TCAGGGTTCTCCATGCTAACCATGTATAGTTCTTCATaGAGTATGGGTTTCAAGTACCCTCCCAATTCAGGT +
Preference number: 6 (lower is better)
Translates to: SGFSMLTMYSSS*SMGFKYPPNSG
Trigger: ACCTGAATTGGGAGGGTACTTGAAACCCATACTCAATGAAGAACTATACATGGTTAGCATGGAGAACCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 72 bp AAATATAAAAGCACAAGATACAATCCTGCTTGTTCCTaGCTGATGGTTCTCTCCTACCTGAGGAAACCCTCC +
Preference number: 6 (lower is better)
Translates to: KYKSTRYNPACS*LMVLSYLRKPS
Trigger: GGAGGGTTTCCTCAGGTAGGAGAGAACCATCAGCAAGGAACAAGCAGGATTGTATCTTGTGCTTTTATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp CACATGGCTGTGATCTTCAAAGGAGTGGATCAGTTTTaGCTTCTGCTTGAAAGTAAATTTTGCCAGTTTGGC +
Preference number: 6 (lower is better)
Translates to: HMAVIFKGVDQF*LLLESKFCQFG
Trigger: GCCAAACTGGCAAAATTTACTTTCAAGCAGAAGTCAAAACTGATCCACTCCTTTGAAGATCACAGCCATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS TCA 72 bp TCTCTTCTTGTTCTACGCTGGGAAATTTTAGGACTATaGACTGCTATTTTAGTTGCACCAGGTGACACATGG +
Preference number: 6 (lower is better)
Translates to: SLLVLRWEILGL*TAILVAPGDTW
Trigger: CCATGTGTCACCTGGTGCAACTAAAATAGCAGTTCATAGTCCTAAAATTTCCCAGCGTAGAACAAGAAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316316.10
ENST00000619706.5
CDS CCA 72 bp CTATTTCTATGTGACAGTCTTCTAACTATTGAAAGTTaGCTGTCATGTCCTTCCTCAGGGTTCTCCATGCTA +
Preference number: 6 (lower is better)
Translates to: LFLCDSLLTIES*LSCPSSGFSML
Trigger: TAGCATGGAGAACCCTGAGGAAGGACATGACAGCCAACTTTCAATAGTTAGAAGACTGTCACATAGAAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CCA 72 bp GCAGTGATTATGTGGAAAATACAGAGCACTGAAGCATaGCCAAGAGTACTGACCTCATCAGATTTGGATTTA +
Preference number: 6 (lower is better)
Translates to: AVIMWKIQSTEA*PRVLTSSDLDL
Trigger: TAAATCCAAATCTGATGAGGTCAGTACTCTTGGCCATGCTTCAGTGCTCTGTATTTTCCACATAATCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 90 bp CTCTCAGATTTCCAGAACAGTTCTGAGGCTCAGAAAGTCTTTAAATaGCCTGGAACATTGCAGATTATTATCCAGATCAACTGCCACTGT +
Preference number: 6 (lower is better)
Translates to: LSDFQNSSEAQKVFK*PGTLQIIIQINCHC
Trigger: ACAGTGGCAGTTGATCTGGATAATAATCTGCAATGTTCCAGGCAATTTAAAGACTTTCTGAGCCTCAGAACTGTTCTGGAAATCTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp TTGAGTCAAAATCTACCTCCTTGTGGCTTACCCCACTaGAACCCAACAGCAACTTCTGTAATTACAATTCTA +
Preference number: 6 (lower is better)
Translates to: LSQNLPPCGLPH*NPTATSVITIL
Trigger: TAGAATTGTAATTACAGAAGTTGCTGTTGGGTTTCAGTGGGGTAAGCCACAAGGAGGTAGATTTTGACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp TCAATAAGCAGTGATTATGTGGAAAATACAGAGCACTaGAGCATGGCCAAGAGTACTGACCTCATCAGATTT +
Preference number: 6 (lower is better)
Translates to: SISSDYVENTEH*SMAKSTDLIRF
Trigger: AAATCTGATGAGGTCAGTACTCTTGGCCATGCTTCAGTGCTCTGTATTTTCCACATAATCACTGCTTATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 90 bp ACAGGGTGTTGGATGTGCCCCAACCCCAATTCTGGTATTTATATTTaGCATAATAAACACTGTCTCAGAACTAACAGGCAATTCTTCATT +
Preference number: 6 (lower is better)
Translates to: TGCWMCPNPNSGIYI*HNKHCLRTNRQFFI
Trigger: AATGAAGAATTGCCTGTTAGTTCTGAGACAGTGTTTATTATGCAAAATATAAATACCAGAATTGGGGTTGGGGCACATCCAACACCCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp ATAGTTTGGATAATTGTCCCCATTCAAATCTCATGTTaGGATATAATCCCTAGTATTGGAGGAGATGCCTGG +
Preference number: 6 (lower is better)
Translates to: IVWIIVPIQISC*DIIPSIGGDAW
Trigger: CCAGGCATCTCCTCCAATACTAGGGATTATATCTCAACATGAGATTTGAATGGGGACAATTATCCAAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp CTCAACATTTGGCAGAGTGCCTTGCAAAACAGTAGGTaGTCAAAACATATAAGGACGCCTTATACTTACTAT +
Preference number: 6 (lower is better)
Translates to: LNIWQSALQNSR*SKHIRTPYTYY
Trigger: ATAGTAAGTATAAGGCGTCCTTATATGTTTTGATCACCTACTGTTTTGCAAGGCACTCTGCCAAATGTTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 72 bp CTAAAATTCTTACTTTTCTACAATCCAGTCTCTCTGTaGCCCTATATCATCTGCGGCATCTTTACTACTGTA +
Preference number: 6 (lower is better)
Translates to: LKFLLFYNPVSL*PYIICGIFTTV
Trigger: TACAGTAGTAAAGATGCCGCAGATGATATAGGGGCACAGAGAGACTGGATTGTAGAAAAGTAAGAATTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 90 bp TTTTCTAAGATAAAGGAGGAAATGATACGATCCCAGTCTTCATTCTaGGTATCAAGCAAAACCAGGATCAGGTCAAATCGACTTAAGAGT +
Preference number: 6 (lower is better)
Translates to: FSKIKEEMIRSQSSF*VSSKTRIRSNRLKS
Trigger: ACTCTTAAGTCGATTTGACCTGATCCTGGTTTTGCTTGATACCAAGAATGAAGACTGGGATCGTATCATTTCCTCCTTTATCTTAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316316.10
ENST00000368478.2
ENST00000458674.2
ENST00000505485.1
ENST00000619706.5
CDS GCA 72 bp ACTCTGGTTAAGTGTGTTAGCTGCAAAAGAGCTTTCTaGCATCTGGACATAATTATACACTTAAGAGTAATC +
Preference number: 6 (lower is better)
Translates to: TLVKCVSCKRAF*HLDIIIHLRVI
Trigger: GATTACTCTTAAGTGTATAATTATGTCCAGATGGCAGAAAGCTCTTTTGCAGCTAACACACTTAACCAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 72 bp AATGCAATGCATCAGTTAACAAGTATATACAAATGTTaGGCCTTCCATATTTTGGTACTGGAGAAAGTGGGC +
Preference number: 6 (lower is better)
Translates to: NAMHQLTSIYKC*AFHILVLEKVG
Trigger: GCCCACTTTCTCCAGTACCAAAATATGGAAGGCCAAACATTTGTATATACTTGTTAACTGATGCATTGCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS CAA 90 bp ACGACATACAATGCAATGCATCAGTTAACAAGTATATACAAATGTTaGGCCTTCCATATTTTGGTACTGGAGAAAGTGGGCCAAAAACAA +
Preference number: 6 (lower is better)
Translates to: TTYNAMHQLTSIYKC*AFHILVLEKVGQKQ
Trigger: TTGTTTTTGGCCCACTTTCTCCAGTACCAAAATATGGAAGGCCAAACATTTGTATATACTTGTTAACTGATGCATTGCATTGTATGTCGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp CCTAAATCCCTAACAATGTACTGTATATGCTGTGCTTaGTTGTCTATGAGAAAAAGAACTCATCACCATCTA +
Preference number: 6 (lower is better)
Translates to: PKSLTMYCICCA*LSMRKRTHHHL
Trigger: TAGATGGTGATGAGTTCTTTTTCTCATAGACAATCAAGCACAGCATATACAGTACATTGTTAGGGATTTAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS TCA 72 bp GCAATTCTTCATTTCCAAGCCTTTGTGCCAATTATATaGTATGTGCTGATGAAAAATGCCTTTCACTCTCTA +
Preference number: 6 (lower is better)
Translates to: AILHFQAFVPII*YVLMKNAFHSL
Trigger: TAGAGAGTGAAAGGCATTTTTCATCAGCACATATCATATAATTGGCACAAAGGCTTGGAAATGAAGAATTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000436788.2
CDS GCA 72 bp CCAAACACTGCCATCTGTACTTGTTACGACATACAATaGAATGCATCAGTTAACAAGTATATACAAATGTTT +
Preference number: 6 (lower is better)
Translates to: PNTAICTCYDIQ*NASVNKYIQMF
Trigger: AAACATTTGTATATACTTGTTAACTGATGCATTGCATTGTATGTCGTAACAAGTACAGATGGCAGTGTTTGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436788.2