RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCM7 (Homo sapiens)

Ensembl gene IDs: ENSG00000166508

Ensembl transcript IDs: ENST00000303887.10, ENST00000343023.10, ENST00000354230.7, ENST00000425308.5, ENST00000463722.5, ENST00000465688.1, ENST00000465738.1, ENST00000467516.5, ENST00000485286.5, ENST00000489841.5, ENST00000491245.6, ENST00000493352.1, ENST00000621318.4

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGGCATCCTTACTAGCCCAAGCCTCTCGCCTCATCTCCACGTATaGTGCTGTGATGTAGTCAGCCAGAGACTCTGGCACCATGGGCTG +
Preference number: 1 (lower is better)
Translates to: GGILTSPSLSPHLHV*CCDVVSQRLWHHGL
Trigger: CAGCCCATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATGAGGCGAGAGGCTTGGGCTAGTAAGGATGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR GCA 90 bp GGCATCCTTACTAGCCCAAGCCTCTCGCCTCATCTCCACGTATGCTaGTGTGATGTAGTCAGCCAGAGACTCTGGCACCATGGGCTGCTT +
Preference number: 1 (lower is better)
Translates to: GILTSPSLSPHLHVC*CDVVSQRLWHHGLL
Trigger: AAGCAGCCCATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATGAGGCGAGAGGCTTGGGCTAGTAAGGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR CCA 90 bp CCTCATCTCCACGTATGCTGCTGTGATGTAGTCAGCCAGAGACTCTaGCACCATGGGCTGCTTCTCGCGGCACATGGCTATGTAACGCCT +
Preference number: 1 (lower is better)
Translates to: PHLHVCCCDVVSQRL*HHGLLLAAHGYVTP
Trigger: AGGCGTTACATAGCCATGTGCCGCGAGAAGCAGCCCATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR-3UTR TCA 90 bp AGCCTCTCGCCTCATCTCCACGTATGCTGCTGTGATGTAGTCAGCCAGAGACTCGCTGGTGCACATAGGTaGTGTGCTGGGCCAACCGTA +
Preference number: 2 (lower is better)
Translates to: SLSPHLHVCCCDVVSQRLAGAHR*CAGPTV
Trigger: TACGGTTGGCCCAGCACATCACCTATGTGCACCAGC...GAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATGAGGCGAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR-3UTR GCA 90 bp CTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAAGGCTCTGGCACCATGGGCTaGTTCTCGCGGCACATGGCT +
Preference number: 2 (lower is better)
Translates to: LLSPPHPPFSDVPEQWKGSGTMG*FSRHMA
Trigger: AGCCATGTGCCGCGAGAAGCAGCCCATGGTGCCAGA...GCCTTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR-3UTR GCA 90 bp TGCCAGAGCAGTGGAAAGGCGCAGGATAGCCAGCAGGGTCCGGGCAGAAGTATACCTCATCTCCACGTATaGTGCTGTGATGTAGTCAGC +
Preference number: 2 (lower is better)
Translates to: CQSSGKAQDSQQGPGRSIPHLHV*CCDVVS
Trigger: GCTGACTACATCACAGCAGCATACGTGGAGATGAGG...TATACTTCTGCCCGGACCCTGCTGGCTATCCTGCGCCTTTCCACTGCTCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR-3UTR CCA 90 bp CATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAAGTCAGCCAGAGACTCTaGCACCATGGGCTGCTTCTC +
Preference number: 2 (lower is better)
Translates to: HLLSPPHPPFSDVPEQWKVSQRL*HHGLLL
Trigger: GAGAAGCAGCCCATGGTGCCAGAGTCTCTGGCTGAC...TTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR-3UTR TCA 90 bp TCACATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGCTATGTAACGCCTCATaGGCTTCATGTCCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SHLLSPPHPPFSDVPEQWLCNAS*ASCPEV
Trigger: AACCTCTGGACATGAAGCTCATGAGGCGTTACATAG...CCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGAGTAAGTGCAGCATaGGAGAAAGAGGGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGVSAA*EKEGLL
Trigger: GAGGAGCCCCTCTTTCTCCCATGCTGCACTTACTCC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
3UTR-3UTR CAA 90 bp TCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAAGGCGCAGGAGCCAACCGTAGGTCATaGTCTCGGTCGGGCCGGTCC +
Preference number: 3 (lower is better)
Translates to: SPPHPPFSDVPEQWKGAGANRRS*SRSGRS
Trigger: GGACCGGCCCGACCGAGACAATGACCTACGGTTGGC...TCCTGCGCCTTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR TCA 72 bp CCCAAGCCTCTCGCCTCATCTCCACGTATGCTGCTGTaGTGTAGTCAGCCAGAGACTCTGGCACCATGGGCT +
Preference number: 3 (lower is better)
Translates to: PKPLASSPRMLL*CSQPETLAPWA
Trigger: AGCCCATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATGAGGCGAGAGGCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR CCA 72 bp CACGTATGCTGCTGTGATGTAGTCAGCCAGAGACTCTaGCACCATGGGCTGCTTCTCGCGGCACATGGCTAT +
Preference number: 3 (lower is better)
Translates to: HVCCCDVVSQRL*HHGLLLAAHGY
Trigger: ATAGCCATGTGCCGCGAGAAGCAGCCCATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR GCA 72 bp ACTAGCCCAAGCCTCTCGCCTCATCTCCACGTATGCTaGTGTGATGTAGTCAGCCAGAGACTCTGGCACCAT +
Preference number: 3 (lower is better)
Translates to: TSPSLSPHLHVC*CDVVSQRLWHH
Trigger: ATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATGAGGCGAGAGGCTTGGGCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR GCA 72 bp CTTACTAGCCCAAGCCTCTCGCCTCATCTCCACGTATaGTGCTGTGATGTAGTCAGCCAGAGACTCTGGCAC +
Preference number: 3 (lower is better)
Translates to: LTSPSLSPHLHV*CCDVVSQRLWH
Trigger: GTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATGAGGCGAGAGGCTTGGGCTAGTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
3UTR TCA 72 bp CTCCTAGAAGAGAGTCCTTTGACATCTCCATTAGCCTaGTGGCTTCATTCACATCTTCTTTCTCCACCACAT +
Preference number: 3 (lower is better)
Translates to: LLEESPLTSPLA*WLHSHLLSPPH
Trigger: ATGTGGTGGAGAAAGAAGATGTGAATGAAGCCATCAGGCTAATGGAGATGTCAAAGGACTCTCTTCTAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp AGACGTGCCAGAGCAGTGGAAAGGCGCAGGATAGCCAGCAGGGTCCGGGCAGAAGCTGGTGCACATAGGTaGTGTGCTGGGCCAACCGTA +
Preference number: 4 (lower is better)
Translates to: RRARAVERRRIASRVRAEAGAHR*CAGPTV
Trigger: TACGGTTGGCCCAGCACATCACCTATGTGCACCAGC...TTCTGCCCGGACCCTGCTGGCTATCCTGCGCCTTTCCACTGCTCTGGCACGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR GCA 90 bp AGACGTGCCAGAGCAGTGGAAAGGCGCAGGATAGCCAGCAGGGTCCGGGCAGAACACCATTCTCAGACGTaGCAGAGCAGTGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: RRARAVERRRIASRVRAEHHSQT*QSSGKA
Trigger: CGCCTTTCCACTGCTCTGGCACGTCTGAGAATGGTG...TTCTGCCCGGACCCTGCTGGCTATCCTGCGCCTTTCCACTGCTCTGGCACGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR GCA 90 bp TCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAAGGCGCAGGAGGTAGCTGTATGTTCTaGTCCAGGCTGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: SPPHPPFSDVPEQWKGAGGSCMF*SRLRRG
Trigger: CCCTCGCCGCAGCCTGGAGCAGAACATACAGCTACC...TCCTGCGCCTTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR GCA 90 bp TCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAAGGCGCAGGATCTGGCACCATGGGCTaGTTCTCGCGGCACATGGCT +
Preference number: 4 (lower is better)
Translates to: SPPHPPFSDVPEQWKGAGSGTMG*FSRHMA
Trigger: AGCCATGTGCCGCGAGAAGCAGCCCATGGTGCCAGA...TCCTGCGCCTTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR CCA 90 bp TCACATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGGCCCGTAGGCAGGGTTaGCGGCAGCCAGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: SHLLSPPHPPFSDVPEQWARRQG*RQPGWS
Trigger: GCTCCATCCTGGCTGCCGCCAACCCTGCCTACGGGC...CCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp TCACATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGCGGTCGGGCCGGTCCTaGATCAGCCAGAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SHLLSPPHPPFSDVPEQWRSGRS*ISQRRS
Trigger: TGACCTCCTCTGGCTGATTCAGGACCGGCCCGACCG...CCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR GCA 90 bp CATGGCTATGTAACGCCTCATGAGCTTCATGTCCAGAGGTTCAAACTGGGAGGGTGTTCTGCTCCAGGCTaGGGCGAGGGTTGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: HGYVTPHELHVQRFKLGGCSAPG*GEGCSA
Trigger: GGCGCTACAACCCTCGCCGCAGCCTGGAGCAGAACA...CCCTCCCAGTTTGAACCTCTGGACATGAAGCTCATGAGGCGTTACATAGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR CCA 90 bp CATCTCCACGTATGCTGCTGTGATGTAGTCAGCCAGAGACTCTGGCACCATGGGGTCAGCCAGAGACTCTaGCACCATGGGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLHVCCCDVVSQRLWHHGVSQRL*HHGLLL
Trigger: GAGAAGCAGCCCATGGTGCCAGAGTCTCTGGCTGAC...CCCATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp AGTATAGGTGGCATCCTTACTAGCCCAAGCCTCTCGCCTCATCTCCACGTATGCCCACGTATGCTGCTGTaGTGTAGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: SIGGILTSPSLSPHLHVCPRMLL*CSQPET
Trigger: AGTCTCTGGCTGACTACATCACAGCAGCATACGTGG...GCATACGTGGAGATGAGGCGAGAGGCTTGGGCTAGTAAGGATGCCACCTATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR GCA 90 bp CATCTCCACGTATGCTGCTGTGATGTAGTCAGCCAGAGACTCTGGCACCATGGGCCTCATCTCCACGTATaGTGCTGTGATGTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: HLHVCCCDVVSQRLWHHGPHLHV*CCDVVS
Trigger: GCTGACTACATCACAGCAGCATACGTGGAGATGAGG...CCCATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp TCACATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGGGCATTCTCACAAATTaGGTCCACCAACTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SHLLSPPHPPFSDVPEQWGILTN*VHQLGV
Trigger: GACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCC...CCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp TGCCAGAGCAGTGGAAAGGCGCAGGATAGCCAGCAGGGTCCGGGCAGAAGTATAACATCTCCATTAGCCTaGTGGCTTCATTCACATCTT +
Preference number: 4 (lower is better)
Translates to: CQSSGKAQDSQQGPGRSITSPLA*WLHSHL
Trigger: AAGATGTGAATGAAGCCATCAGGCTAATGGAGATGT...TATACTTCTGCCCGGACCCTGCTGGCTATCCTGCGCCTTTCCACTGCTCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTTCAGTGCCATCGCTaGCGAGGGCCGTGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLQCHR*RGPCGR
Trigger: GCGGCCGCACGGCCCTCGGCAGCGATGGCACTGAAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303887.10
ENST00000621318.4
CDS-3UTR GCA 90 bp CTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAAGGCCATCTCCACGTATGCTaGTGTGATGTAGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLSPPHPPFSDVPEQWKGHLHVC*CDVVSQ
Trigger: CTGGCTGACTACATCACAGCAGCATACGTGGAGATG...GCCTTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCGATCCCAGCCCACTaGCGCCTTTCCCGGGCCCGA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKAIPAH*RLSRAR
Trigger: TCGGGCCCGGGAAAGGCGGCAGTGGGCTGGGATCGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCGTGCGGCCGCGCTTaGCGGGCTCAGAGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPCGRA*RAQRSC
Trigger: GCAAGACCTCTGAGCCCGCCAAGCGCGGCCGCACGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303887.10
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGTCCGCGGGGACAGTaGCGGCCGGGATGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSPRGQ*RPGCGR
Trigger: TCGGCCACATCCCGGCCGCCACTGTCCCCGCGGACT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCCCGCGGTCCGAGCTaGCGCGGGCGGAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSRGPS*RGRRRI
Trigger: GATTCTCCTCCGCCCGCGCCAGCTCGGACCGCGGGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR CCA 90 bp CATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAATGCCGGCCTTGGCAATaGAGATGGTCTGGCATTCTC +
Preference number: 4 (lower is better)
Translates to: HLLSPPHPPFSDVPEQWKCRPWQ*RWSGIL
Trigger: GAGAATGCCAGACCATCTCCATTGCCAAGGCCGGCA...TTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGTGCGGGCCTAGAATaGGTGACGGGGAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRAGLE*VTGRRC
Trigger: GCACCGCCTCCCCGTCACTCATTCTAGGCCCGCACG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGTGACGGGGAGGCGGTaGGGGCGTCGGAAGGGAATC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKVTGRR*GRRKGI
Trigger: GATTCCCTTCCGACGCCCGCACCGCCTCCCCGTCAC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAACCGGCGCCACTGCGTaGGGGCCAATCGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKTGATA*GPIGQG
Trigger: GCCTTGTCCGATTGGCCCGCACGCAGTGGCGCCGGT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGTGACCGGCGCCACTaGGTGCGGGCCAATCGGACA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRDRRH*VRANRT
Trigger: TGTCCGATTGGCCCGCACGCAGTGGCGCCGGTCACG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCCCGTAGGCAGGGTTaGCGGCAGCCAGGATGGAGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKARRQG*RQPGWS
Trigger: GCTCCATCCTGGCTGCCGCCAACCCTGCCTACGGGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp TCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAAGGCGCAGGAGCAATGGAGATGGTCTaGCATTCTCACAAATTGAGT +
Preference number: 4 (lower is better)
Translates to: SPPHPPFSDVPEQWKGAGAMEMV*HSHKLS
Trigger: ACTCAATTTGTGAGAATGCCAGACCATCTCCATTGC...TCCTGCGCCTTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGTAAGCCCCACTCCTaGGGAGCCCCGGCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRKPHS*GAPACC
Trigger: ACAACAGGCCGGGGCTCCTCAGGAGTGGGGCTTACG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGGTCGGGCCGGTCCTaGATCAGCCAGAGGAGGTCA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRSGRS*ISQRRS
Trigger: TGACCTCCTCTGGCTGATTCAGGACCGGCCCGACCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGTCCCCTTAGCCCCTaGTTTCACCGGGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGPLSP*FHRDLR
Trigger: GCGGAGGTCCCGGTGAAATCAGGGGCTAAGGGGACC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGCGTAGTCCTTCAGTaGCATCGCTGCCGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRVVLQ*HRCRGP
Trigger: CGGCCCTCGGCAGCGATGGCACTGAAGGACTACGCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303887.10
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGAATCTCCGCGCGGTaGACTGTGGCCGGCCAACCG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRISAR*TVAGQP
Trigger: CGGTTGGCCGGCCACAGTCCACCGCGCGGAGATTCT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303887.10
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGTGGCGGCCGGGATGTaGCCGAGCTCTTCTACCGGA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKVAAGM*PSSSTG
Trigger: TCCGGTAGAAGAGCTCGGCCACATCCCGGCCGCCAC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCGCGCGGTGGACTGTaGCCGGCCAACCGAAATTGG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPRGGL*PANRNW
Trigger: CCAATTTCGGTTGGCCGGCCACAGTCCACCGCGCGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGCGCCCTTCCCCGTTaGCCCCTCACACTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSALPR*PLTLRS
Trigger: AGACCGGAGTGTGAGGGGCCAACGGGGAAGGGCGCT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR CCA 90 bp AGTATAGGTGGCATCCTTACTAGCCCAAGCCTCTCGCCTCATCTCCACGTATGCCCTTGGCAATGGAGATaGTCTGGCATTCTCACAAAT +
Preference number: 4 (lower is better)
Translates to: SIGGILTSPSLSPHLHVCPWQWR*SGILTN
Trigger: ATTTGTGAGAATGCCAGACCATCTCCATTGCCAAGG...GCATACGTGGAGATGAGGCGAGAGGCTTGGGCTAGTAAGGATGCCACCTATACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATGCTCCTGGGGAAGCTaGGAATCTCCGCGCGGTGGA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKCSWGS*ESPRGG
Trigger: TCCACCGCGCGGAGATTCTCAGCTTCCCCAGGAGCA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303887.10
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCCACCTGTTCCCGATaGGCCAGCCGAACCAACTGG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKATCSR*ASRTNW
Trigger: CCAGTTGGTTCGGCTGGCTCATCGGGAACAGGTGGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp CATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGAAACTATGTAACGCCTCATaGGCTTCATGTCCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HLLSPPHPPFSDVPEQWKLCNAS*ASCPEV
Trigger: AACCTCTGGACATGAAGCTCATGAGGCGTTACATAG...TTTCCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGACACTTCGGCCCCCTaGGACCAGTTCACGGACGGT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKDTSAP*DQFTDG
Trigger: ACCGTCCGTGAACTGGTCTCAGGGGGCCGAAGTGTC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTGGAGCCCCGTGTCTaGAGATACAGCCGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLEPRV*RYSRPP
Trigger: AGGAGGGCGGCTGTATCTGCAGACACGGGGCTCCAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCTCGTGGATGGCTGTaGGGTCGGCCTCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPRGWL*GRPQPS
Trigger: AGATGGCTGAGGCCGACCGCACAGCCATCCACGAGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATGTTCTGCTCCAGGCTaGGGCGAGGGTTGTAGCGCC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKCSAPG*GEGCSA
Trigger: GGCGCTACAACCCTCGCCGCAGCCTGGAGCAGAACA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGGCCTGTTGTGTACTaGCTGCGAGGCGCCAGTCGA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRPVVY*LRGASR
Trigger: TCGACTGGCGCCTCGCAGCCAGTACACAACAGGCCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAATGCAGCACACACCCTaGTCAGCCAGCACCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKMQHTP*SASTRA
Trigger: GGCCCTGGTGCTGGCTGACCAGGGTGTGTGCTGCAT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGAGCCGCCTGGAACTaGGCGGGTGTGAAGCCACGA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRAAWN*AGVKPR
Trigger: TCGTGGCTTCACACCCGCCCAGTTCCAGGCGGCTCT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAATACAGCCGCCCTCCTaGGCGGTTGGTTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKIQPPS*AVGLAL
Trigger: GAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTAT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGAACTGGGCGGGTGTaGAGCCACGAGATACACAGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGTGRV*SHEIHS
Trigger: GCTGTGTATCTCGTGGCTTCACACCCGCCCAGTTCC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGCAGGATCCTTCACTaGGTCCTTCCACCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRRILH*VLPPAS
Trigger: ACTGGCGGGTGGAAGGACTCAGTGAAGGATCCTGCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGGTCCCGACTCCGCTaGTCCATCATTAGCCGATGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGSRLR*SIISRC
Trigger: GCATCGGCTAATGATGGAGCAGCGGAGTCGGGACCC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGTAGCTGTATGTTCTaGTCCAGGCTGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGSCMF*SRLRRG
Trigger: CCCTCGCCGCAGCCTGGAGCAGAACATACAGCTACC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCTGGCACCATGGGCTaGTTCTCGCGGCACATGGCT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSGTMG*FSRHMA
Trigger: AGCCATGTGCCGCGAGAAGCAGCCCATGGTGCCAGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCAGGGTACTGGTTCTaGGGGCTTCGGACCATCCCA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKAGYWF*GLRTIP
Trigger: TGGGATGGTCCGAAGCCCCCAGAACCAGTACCCTGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCTGAGCGGTTGGTTTaGCACTCCTGGCTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPERLV*HSWLGH
Trigger: GTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCCCTCCTGAGCGGTTaGTTTGGCACTCCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKALLSG*FGTPGL
Trigger: CAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCAGTGACGCTGACGTaGTCTCCAGGCTGGGCAATC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPVTLT*SPGWAI
Trigger: GATTGCCCAGCCTGGAGACCACGTCAGCGTCACTGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAATGCCTCGAGGAGACTaGTCCACACCCCCGACTAGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKMPRGD*STPPTS
Trigger: GCTAGTCGGGGGTGTGGACCAGTCTCCTCGAGGCAT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCATCCAGAGCCGCCTaGAACTGGGCGGGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSSRAA*NWAGVK
Trigger: CTTCACACCCGCCCAGTTCCAGGCGGCTCTGGATGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATGTATCCTAGACCCTTaGGGCTGGGAAGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKCILDP*GWEGAE
Trigger: CTCCGCCCCTTCCCAGCCCCAAGGGTCTAGGATACA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCTGGTGCACATAGGTaGTGTGCTGGGCCAACCGTA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKAGAHR*CAGPTV
Trigger: TACGGTTGGCCCAGCACATCACCTATGTGCACCAGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAACATCTGCTGGTCTCTaGGTCCTAGCTGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKTSAGL*VLAVCP
Trigger: GGGGCAGACAGCTAGGACTCAGAGACCAGCAGATGT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGGCTGGTAGGTCTCTaGCCCACACTGGTCACAAGT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRLVGL*PTLVTS
Trigger: ACTTGTGACCAGTGTGGGGCAGAGACCTACCAGCCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGAGATACACAGCGCTaGTCTGCCTCAGAGAACCGG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRDTQR*SASENR
Trigger: CCGGTTCTCTGAGGCAGAGCAGCGCTGTGTATCTCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAAGAGCCCGTGGCAGTaGACAGGGCCATCCAACATC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKKSPWQ*TGPSNI
Trigger: GATGTTGGATGGCCCTGTGCACTGCCACGGGCTCTT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGTTCAGCAGGGTACTaGTTCTGGGGGCTTCGGACC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSSAGY*FWGLRT
Trigger: GGTCCGAAGCCCCCAGAACCAGTACCCTGCTGAACT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAACAGGAGCTGAGACTTaGCCACACCAGGATCCCCCA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKTGAET*PHQDPP
Trigger: TGGGGGATCCTGGTGTGGCCAAGTCTCAGCTCCTGT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGTCAGCCAGAGACTCTaGCACCATGGGCTGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKVSQRL*HHGLLL
Trigger: GAGAAGCAGCCCATGGTGCCAGAGTCTCTGGCTGAC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCCCTCTCCTTGTACTaGGGCAGCAGCTCTTGTACG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSLSLY*GSSSCT
Trigger: CGTACAAGAGCTGCTGCCTCAGTACAAGGAGAGGGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTCTTTCCACCCCTATaGTCCCCCGCCTTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKFFPPL*SPAFFG
Trigger: CCCAAAGAAGGCGGGGGATCATAGGGGTGGAAAGAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCCTCCTCTGCAATTTaGCTCAGCTCCTCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSSSAI*LSSSLV
Trigger: CACCAGGGAGGAGCTGAGGCAAATTGCAGAGGAGGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATGCCCCGGATTTTCATaGCTCGAGGAGACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKCPGFS*LEETGP
Trigger: TGGACCAGTCTCCTCGAGGCATGAAAATCCGGGGCA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACACCATTCTCAGACGTaGCAGAGCAGTGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKHHSQT*QSSGKA
Trigger: CGCCTTTCCACTGCTCTGGCACGTCTGAGAATGGTG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATACACAGCGCTGCTCTaGCTCAGAGAACCGGACACT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKYTALL*LREPDT
Trigger: AGTGTCCGGTTCTCTGAGGCAGAGCAGCGCTGTGTA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGAGGACCCCAGGGTTaGAAGCAGGCTGGAATCAGA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRGPQG*KQAGIR
Trigger: TCTGATTCCAGCCTGCTTGCAACCCTGGGGTCCTCT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCAAGCCAATCACCGTaGGGGCCTAGAATGAGTGAC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKASQSP*GPRMSD
Trigger: GTCACTCATTCTAGGCCCGCACGGTGATTGGCTTGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGCCAGTCCAGCCATTaGCCATCACACCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSQSSH*PSHPET
Trigger: TGTCTCTGGGTGTGATGGCCAATGGCTGGACTGGCT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGAATAAAGAGCCCGTaGCAGTGCACAGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRIKSP*QCTGPS
Trigger: GGATGGCCCTGTGCACTGCCACGGGCTCTTTATTCT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGCATTCTCACAAATTaGGTCCACCAACTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGILTN*VHQLGV
Trigger: GACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCTCAAATCTGCGCATaGGTTCAGCAGGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKAQICA*VQQGTG
Trigger: ACCAGTACCCTGCTGAACTCATGCGCAGATTTGAGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303887.10
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCACGTATGCTGCTGTaGTGTAGTCAGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPRMLL*CSQPET
Trigger: AGTCTCTGGCTGACTACATCACAGCAGCATACGTGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTCACAATCTGCGCATaGGTTCAGCAGGGTACTGGT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLTICA*VQQGTG
Trigger: ACCAGTACCCTGCTGAACTCATGCGCAGATTGTGAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCTGTCGGAACCCAGTaGGCAGGATTGGCAAGAAAA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPVGTQ*AGLARK
Trigger: TTTTCTTGCCAATCCTGCGCACTGGGTTCCGACAGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGGGAAGCATTGACCTaGCAGACATTGAGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKREALT*QTLSSS
Trigger: TGAGGAGCTCAATGTCTGGCAGGTCAATGCTTCCCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCCAGCCGAACCAACTaGTTCCCATACTTGAACTGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKASRTN*FPYLNC
Trigger: GCAGTTCAAGTATGGGAACCAGTTGGTTCGGCTGGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTGGCACTCCTGGCTTaGGCACATGATCAGAGGCAT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLALLA*AHDQRH
Trigger: ATGCCTCTGATCATGTGCCCAAGCCAGGAGTGCCAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAACGTGGTCTCCAGGCTaGGCAATCCTTGTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKTWSPG*AILVFS
Trigger: AGAGAACACAAGGATTGCCCAGCCTGGAGACCACGT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAAACAAAGAAGCACATaGGCCCGGATTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKKQRST*ARIPAA
Trigger: AGCGGCTGGAATCCGGGCCCATGTGCTTCTTTGTTT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTTCAGAGACACGAGTaGCGATTCCACGCACAGTTA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLQRHE*RFHAQL
Trigger: TAACTGTGCGTGGAATCGTCACTCGTGTCTCTGAAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACAGTCGATCAATGTATaGCAGGAGCTGAGACTTGGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKQSINV*QELRLG
Trigger: GCCAAGTCTCAGCTCCTGTCATACATTGATCGACTG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGAATCAGACAAAAGTaGTCCGTGTCCGGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGIRQK*SVSGKH
Trigger: ATGCTTCCCGGACACGGATCACTTTTGTCTGATTCC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACATCTCCACGTATGCTaGTGTGATGTAGTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKHLHVC*CDVVSQ
Trigger: CTGGCTGACTACATCACAGCAGCATACGTGGAGATG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCTCATCTCCACGTATaGTGCTGTGATGTAGTCAGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPHLHV*CCDVVS
Trigger: GCTGACTACATCACAGCAGCATACGTGGAGATGAGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCTTCGCGTAGCGCCTaGCATTCTCACAAATTGAGT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKASRSA*HSHKLS
Trigger: ACTCAATTTGTGAGAATGCCAGGCGCTACGCGAAGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGTCACAAGTGTAAGTaGCCACCACCATCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGHKCK*PPPSWV
Trigger: AACCCAAGATGGTGGTGGCCACTTACACTTGTGACC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTGGTTTGGCACTCCTaGCTTGGGCACATGATCAGA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLVWHS*LGHMIR
Trigger: TCTGATCATGTGCCCAAGCCAGGAGTGCCAAACCAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCCAGTGCGCAGGATTaGCAAGAAAATACCAGTGAC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPSAQD*QENTSD
Trigger: GTCACTGGTATTTTCTTGCCAATCCTGCGCACTGGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCAGTTCACGGACGGTaGCAAATATCACATCTGCTG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPVHGR*QISHLL
Trigger: CAGCAGATGTGATATTTGCCACCGTCCGTGAACTGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAACTGGTTCCCATACTTaGACTGCTTCTTCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKTGSHT*TASSRV
Trigger: AACTCGGGAAGAAGCAGTTCAAGTATGGGAACCAGT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTTCCCACAGGCACCTaGTCACTATGTTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKFPTGT*SLCSCI
Trigger: GATGCAAGAACATAGTGATCAGGTGCCTGTGGGAAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTTCTACCAGCACCGTaGTACTACGAGGGATATTTC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLLPAP*YYEGYF
Trigger: GAAATATCCCTCGTAGTATCACGGTGCTGGTAGAAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATATTTCTGGGGCGATTaGAGCTGCCAGCTTTTCGTA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKYFWGD*SCQLFV
Trigger: TACGAAAAGCTGGCAGCTTCAATCGCCCCAGAAATA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCATCAGACAGATGTTaGTGTTGCCCCGGATTTTCA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPSDRC*CCPGFS
Trigger: TGAAAATCCGGGGCAACATCAACATCTGTCTGATGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTATGTAACGCCTCATaGGCTTCATGTCCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLCNAS*ASCPEV
Trigger: AACCTCTGGACATGAAGCTCATGAGGCGTTACATAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTGCTGCTAGGGCCTTaGAAATACAGCTCACTAAGG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLLLGP*KYSSLR
Trigger: CCTTAGTGAGCTGTATTTTCAAGGCCCTAGCAGCAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGCAAATATCACATCTaGTGGTCTCTGAGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGKYHI*WSLSPS
Trigger: GCTAGGACTCAGAGACCAGCAGATGTGATATTTGCC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGGGTTGCAAGCAGGCTaGAATCAGACAAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKGLQAG*NQTKVI
Trigger: GATCACTTTTGTCTGATTCCAGCCTGCTTGCAACCC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTGCTGCTAGGGCCTTaGAAATACAGCTCAAATCTG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLLLGP*KYSSNL
Trigger: CAGATTTGAGCTGTATTTTCAAGGCCCTAGCAGCAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303887.10
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCTCCAGAACGGCCATaGTTTCCCAATTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSPERP*FPNSSF
Trigger: GAATGAAGAATTGGGAAATCATGGCCGTTCTGGAGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTCTTCACATCTTCATaGCCGTATATTTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKFFTSS*PYISGA
Trigger: CGCCCCAGAAATATACGGGCATGAAGATGTGAAGAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAACATCTCCATTAGCCTaGTGGCTTCATTCACATCTT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKTSPLA*WLHSHL
Trigger: AAGATGTGAATGAAGCCATCAGGCTAATGGAGATGT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR TCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCCCAGGCTAGAAGATaGCAATCTACAAACACTTTT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKAQARR*QSTNTF
Trigger: AAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR GCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTCCCATACTTGAACTaGTTCTTCCCGAGTTCATCA +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKFPYLN*FFPSSS
Trigger: TGATGAACTCGGGAAGAAGCAGTTCAAGTATGGGAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAAATATCACATCTGCTaGTCTCTGAGTCCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKKYHIC*SLSPSC
Trigger: ACAGCTAGGACTCAGAGACCAGCAGATGTGATATTT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CCA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCACAAACAAGATCCTaGAGAACCAATCCCTACATC +
Preference number: 4 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSQTRS*RTNPYI
Trigger: GATGTAGGGATTGGTTCTCCAGGATCTTGTTTGTGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354230.7
ENST00000621318.4
CDS TCA 90 bp GCGGGAGGGGCGCCCAGGGCCAGCCTGTGTCGCAGGATCCTTCACTaGGTCCTTCCACCCGCCAGTCCGCGGGGACAGTGGCGGCCGGGA +
Preference number: 5 (lower is better)
Translates to: AGGAPRASLCRRILH*VLPPASPRGQWRPG
Trigger: TCCCGGCCGCCACTGTCCCCGCGGACTGGCGGGTGGAAGGACTCAGTGAAGGATCCTGCGACACAGGCTGGCCCTGGGCGCCCCTCCCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS GCA 90 bp CAGCCATTGGCCATCACACCCAGAGACACCGCGATCCCAGCCCACTaGCGCCTTTCCCGGGCCCGAGCGAAGCTCCGGATCCCAGGCACG +
Preference number: 5 (lower is better)
Translates to: QPLAITPRDTAIPAH*RLSRARAKLRIPGT
Trigger: CGTGCCTGGGATCCGGAGCTTCGCTCGGGCCCGGGAAAGGCGGCAGTGGGCTGGGATCGCGGTGTCTCTGGGTGTGATGGCCAATGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
CDS TCA 90 bp TGCGGCCGCGCTTGGCGGGCTCAGAGGTCTTGCTCCTGGGGAAGCTaGGAATCTCCGCGCGGTGGACTGTGGCCGGCCAACCGAAATTGG +
Preference number: 5 (lower is better)
Translates to: CGRAWRAQRSCSWGS*ESPRGGLWPANRNW
Trigger: CCAATTTCGGTTGGCCGGCCACAGTCCACCGCGCGGAGATTCTCAGCTTCCCCAGGAGCAAGACCTCTGAGCCCGCCAAGCGCGGCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343023.10
ENST00000463722.5
ENST00000621318.4
CDS GCA 90 bp CAAGGCGGCCTTCTTCACCTCCCGCTAGCCGCAAGCCAATCACCGTaGGGGCCTAGAATGAGTGACGGGGAGGCGGTGCGGGCGTCGGAA +
Preference number: 5 (lower is better)
Translates to: QGGLLHLPLAASQSP*GPRMSDGEAVRASE
Trigger: TTCCGACGCCCGCACCGCCTCCCCGTCACTCATTCTAGGCCCGCACGGTGATTGGCTTGCGGCTAGCGGGAGGTGAAGAAGGCCGCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS CCA 90 bp GGCTCAGAGGTCTTGCTCCTGGGGAAGCTGAGAATCTCCGCGCGGTaGACTGTGGCCGGCCAACCGAAATTGGCGCGAAACGTCGCCCCC +
Preference number: 5 (lower is better)
Translates to: GSEVLLLGKLRISAR*TVAGQPKLARNVAP
Trigger: GGGGGCGACGTTTCGCGCCAATTTCGGTTGGCCGGCCACAGTCCACCGCGCGGAGATTCTCAGCTTCCCCAGGAGCAAGACCTCTGAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS GCA 90 bp GCCGCCTGGAACTGGGCGGGTGTGAAGCCACGAGATACACAGCGCTaGTCTGCCTCAGAGAACCGGACACTTCGGCCCCCTGAGACCAGT +
Preference number: 5 (lower is better)
Translates to: AAWNWAGVKPRDTQR*SASENRTLRPPETS
Trigger: ACTGGTCTCAGGGGGCCGAAGTGTCCGGTTCTCTGAGGCAGAGCAGCGCTGTGTATCTCGTGGCTTCACACCCGCCCAGTTCCAGGCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 90 bp CCCGCTCCCGCCATCGCTTCCGCTCTTAGTAAACAAAGAAGCACATaGGCCCGGATTCCAGCCGCTTCACAGCTCGGGATTCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: PAPAIASALSKQRST*ARIPAASQLGIPPP
Trigger: GGGCGGAGGAATCCCGAGCTGTGAAGCGGCTGGAATCCGGGCCCATGTGCTTCTTTGTTTACTAAGAGCGGAAGCGATGGCGGGAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
CDS CCA 90 bp CCGACAGAGACCACTCACAATCTGCGCATGAGTTCAGCAGGGTACTaGTTCTGGGGGCTTCGGACCATCCCAGGGTCCCGACTCCGCTGC +
Preference number: 5 (lower is better)
Translates to: PTETTHNLRMSSAGY*FWGLRTIPGSRLRC
Trigger: GCAGCGGAGTCGGGACCCTGGGATGGTCCGAAGCCCCCAGAACCAGTACCCTGCTGAACTCATGCGCAGATTGTGAGTGGTCTCTGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 90 bp ATGTGCTGGGCCAACCGTAGGTCATTGTCTCGGTCGGGCCGGTCCTaGATCAGCCAGAGGAGGTCAAACCGGGAGAGCAGTGCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: MCWANRRSLSRSGRS*ISQRRSNRESSAAG
Trigger: ACCTGCTGCACTGCTCTCCCGGTTTGACCTCCTCTGGCTGATTCAGGACCGGCCCGACCGAGACAATGACCTACGGTTGGCCCAGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000491245.6
ENST00000621318.4
CDS CCA 90 bp GAGACCACTCACAATCTGCGCATGAGTTCAGCAGGGTACTGGTTCTaGGGGCTTCGGACCATCCCAGGGTCCCGACTCCGCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: ETTHNLRMSSAGYWF*GLRTIPGSRLRCSI
Trigger: GATGGAGCAGCGGAGTCGGGACCCTGGGATGGTCCGAAGCCCCCAGAACCAGTACCCTGCTGAACTCATGCGCAGATTGTGAGTGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 90 bp GAGCCCCGTGTCTGCAGATACAGCCGCCCTCCTGAGCGGTTGGTTTaGCACTCCTGGCTTGGGCACATGATCAGAGGCATGAAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: EPRVCRYSRPPERLV*HSWLGHMIRGMKVG
Trigger: TCCCACTTTCATGCCTCTGATCATGTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGACACGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 90 bp CCGGCCTGTTGTGTACTGGCTGCGAGGCGCCAGTCGATCAATGTATaGCAGGAGCTGAGACTTGGCCACACCAGGATCCCCCATCAGACA +
Preference number: 5 (lower is better)
Translates to: PACCVLAARRQSINV*QELRLGHTRIPHQT
Trigger: TGTCTGATGGGGGATCCTGGTGTGGCCAAGTCTCAGCTCCTGTCATACATTGATCGACTGGCGCCTCGCAGCCAGTACACAACAGGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 90 bp GGCAGGCCAGCAGGGAACAAGAGGACCCCAGGGTTGCAAGCAGGCTaGAATCAGACAAAAGTGATCCGTGTCCGGGAAGCATTGACCTGC +
Preference number: 5 (lower is better)
Translates to: GRPAGNKRTPGLQAG*NQTKVIRVREALTC
Trigger: GCAGGTCAATGCTTCCCGGACACGGATCACTTTTGTCTGATTCCAGCCTGCTTGCAACCCTGGGGTCCTCTTGTTCCCTGCTGGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 90 bp GGCATCAGCAAAGAGCTTCGCGTAGCGCCTGGCATTCTCACAAATTaGGTCCACCAACTCGGGGTCATCCTCGGCTACGTCGTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: GISKELRVAPGILTN*VHQLGVILGYVVQV
Trigger: GACCTGGACGACGTAGCCGAGGATGACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCAGGCGCTACGCGAAGCTCTTTGCTGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 90 bp TTTGATGAATCTGGAGCCCCGTGTCTGCAGATACAGCCGCCCTCCTaGGCGGTTGGTTTGGCACTCCTGGCTTGGGCACATGATCAGAGG +
Preference number: 5 (lower is better)
Translates to: FDESGAPCLQIQPPS*AVGLALLAWAHDQR
Trigger: CCTCTGATCATGTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGACACGGGGCTCCAGATTCATCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 90 bp TACACAGCGCTGCTCTGCCTCAGAGAACCGGACACTTCGGCCCCCTaGGACCAGTTCACGGACGGTGGCAAATATCACATCTGCTGGTCT +
Preference number: 5 (lower is better)
Translates to: YTALLCLREPDTSAP*DQFTDGGKYHICWS
Trigger: AGACCAGCAGATGTGATATTTGCCACCGTCCGTGAACTGGTCTCAGGGGGCCGAAGTGTCCGGTTCTCTGAGGCAGAGCAGCGCTGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 90 bp AAATACAGCTCAAATCTGCGCATGAGTTCAGCAGGGTACTGGTTCTaGGGGCTTCGGACCATCCCAGGGTCCCGACTCCGCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: KYSSNLRMSSAGYWF*GLRTIPGSRLRCSI
Trigger: GATGGAGCAGCGGAGTCGGGACCCTGGGATGGTCCGAAGCCCCCAGAACCAGTACCCTGCTGAACTCATGCGCAGATTTGAGCTGTATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000425308.5
CDS CCA 90 bp GTCTGCAGATACAGCCGCCCTCCTGAGCGGTTGGTTTGGCACTCCTaGCTTGGGCACATGATCAGAGGCATGAAAGTGGGAGACTGGATC +
Preference number: 5 (lower is better)
Translates to: VCRYSRPPERLVWHS*LGHMIRGMKVGDWI
Trigger: GATCCAGTCTCCCACTTTCATGCCTCTGATCATGTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS-3UTR CAA 90 bp TCACATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGGCCAACCGTAGGTCATaGTCTCGGTCGGGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: SHLLSPPHPPFSDVPEQWANRRS*SRSGRS
Trigger: GGACCGGCCCGACCGAGACAATGACCTACGGTTGGC...CCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS CCA 90 bp GCAGCAGCTCTTGTACGGCATCAGCAAAGAGCTTCGCGTAGCGCCTaGCATTCTCACAAATTGAGTCCACCAACTCGGGGTCATCCTCGG +
Preference number: 5 (lower is better)
Translates to: AAALVRHQQRASRSA*HSHKLSPPTRGHPR
Trigger: CCGAGGATGACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCAGGCGCTACGCGAAGCTCTTTGCTGATGCCGTACAAGAGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 90 bp ACTCTTCCTTACCTGTACCACCTGTCGGAACCCAGTGCGCAGGATTaGCAAGAAAATACCAGTGACGCTGACGTGGTCTCCAGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TLPYLYHLSEPSAQD*QENTSDADVVSRLG
Trigger: GCCCAGCCTGGAGACCACGTCAGCGTCACTGGTATTTTCTTGCCAATCCTGCGCACTGGGTTCCGACAGGTGGTACAGGTAAGGAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463722.5
CDS TCA 90 bp GTGTACTGGCTGCGAGGCGCCAGTCGATCAATGTATGACAGGAGCTaGGACTTGGCCACACCAGGATCCCCCATCAGACAGATGTTGATG +
Preference number: 5 (lower is better)
Translates to: VYWLRGASRSMYDRS*DLATPGSPIRQMLM
Trigger: CATCAACATCTGTCTGATGGGGGATCCTGGTGTGGCCAAGTCTCAGCTCCTGTCATACATTGATCGACTGGCGCCTCGCAGCCAGTACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 90 bp TACACAGCGCTGCTCTGCCTCAGAGAACCGGACACTTCGGCCCCCTaGGACCAGTTCACGGACGGTGGCAAATATCACATCTGCAATTTG +
Preference number: 5 (lower is better)
Translates to: YTALLCLREPDTSAP*DQFTDGGKYHICNL
Trigger: CAAATTGCAGATGTGATATTTGCCACCGTCCGTGAACTGGTCTCAGGGGGCCGAAGTGTCCGGTTCTCTGAGGCAGAGCAGCGCTGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000343023.10
CDS TCA 90 bp CAATCCCTACATCTTTCCCGACAGAGACCACTCACAATCTGCGCATaGGTTCAGCAGGGTACTGGTTCTGGGGGCTTCGGACCATCCCAG +
Preference number: 5 (lower is better)
Translates to: QSLHLSRQRPLTICA*VQQGTGSGGFGPSQ
Trigger: CTGGGATGGTCCGAAGCCCCCAGAACCAGTACCCTGCTGAACTCATGCGCAGATTGTGAGTGGTCTCTGTCGGGAAAGATGTAGGGATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS GCA 90 bp TGCATCTTCATCTCCTGGAATTTGATGAATCTGGAGCCCCGTGTCTaGAGATACAGCCGCCCTCCTGAGCGGTTGGTTTGGCACTCCTGG +
Preference number: 5 (lower is better)
Translates to: CIFISWNLMNLEPRV*RYSRPPERLVWHSW
Trigger: CCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGACACGGGGCTCCAGATTCATCAAATTCCAGGAGATGAAGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS-3UTR CAA 90 bp CATCTCCACGTATGCTGCTGTGATGTAGTCAGCCAGAGACTCTGGCACCATGGGCTAGCTGTCTGCCCCTaGTCTCCTAGAAGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: HLHVCCCDVVSQRLWHHGLAVCP*SPRRES
Trigger: GGACTCTCTTCTAGGAGACAAGGGGCAGACAGCTAG...CCCATGGTGCCAGAGTCTCTGGCTGACTACATCACAGCAGCATACGTGGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS TCA 90 bp AGGCCCGACTTTCGCCGTCTTCTTGTCTACTCTCCAGAACGGCCATaGTTTCCCAATTCTTCATTCTGTCCTCCAAGGGGGACCCGCTCA +
Preference number: 5 (lower is better)
Translates to: RPDFRRLLVYSPERP*FPNSSFCPPRGTRS
Trigger: TGAGCGGGTCCCCCTTGGAGGACAGAATGAAGAATTGGGAAATCATGGCCGTTCTGGAGAGTAGACAAGAAGACGGCGAAAGTCGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS GCA 90 bp CACAAGTCTGTTTCTAACCAGCGAAGAATAAAGAGCCCGTGGCAGTaGACAGGGCCATCCAACATCTCCCCAGGGGAATTCCGGTCCCTA +
Preference number: 5 (lower is better)
Translates to: HKSVSNQRRIKSPWQ*TGPSNISPGEFRSL
Trigger: TAGGGACCGGAATTCCCCTGGGGAGATGTTGGATGGCCCTGTGCACTGCCACGGGCTCTTTATTCTTCGCTGGTTAGAAACAGACTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000425308.5
ENST00000465738.1
ENST00000467516.5
ENST00000485286.5
CDS-3UTR CAA 90 bp TCACATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGGTGAGAATGCCGGCCTaGGCAATGGAGATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: SHLLSPPHPPFSDVPEQWVRMPA*AMEMVW
Trigger: CCAGACCATCTCCATTGCCAAGGCCGGCATTCTCAC...CCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCCGTGCGGCCGCGCTaGGCGGGCTCAGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKAVRPR*AGSEVL
Trigger: CAAGACCTCTGAGCCCGCCAAGCGCGGCCGCACGGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303887.10
ENST00000621318.4
CDS-3UTR CAA 90 bp CTAGCTGTCTGCCCCTTGTCTCCTAGAAGAGAGTCCTTTGACATCTCCATTAGCATGGAGCAGCGGGCATaGAGTGTGGTGAGAATGCCG +
Preference number: 5 (lower is better)
Translates to: LAVCPLSPRRESFDISISMEQRA*SVVRMP
Trigger: CGGCATTCTCACCACACTCAATGCCCGCTGCTCCAT...GCTAATGGAGATGTCAAAGGACTCTCTTCTAGGAGACAAGGGGCAGACAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS TCA 90 bp CTCCAGGCTGGGCAATCCTTGTGTTCTCTCCTTCTACCAGCACCGTaGTACTACGAGGGATATTTCCCACAGGCACCTGATCACTATGTT +
Preference number: 5 (lower is better)
Translates to: LQAGQSLCSLLLPAP*YYEGYFPQAPDHYV
Trigger: AACATAGTGATCAGGTGCCTGTGGGAAATATCCCTCGTAGTATCACGGTGCTGGTAGAAGGAGAGAACACAAGGATTGCCCAGCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 90 bp GCCCGCACTTCCCGGATCACACGAGGCTTGTTGCTGCTAGGGCCTTaGAAATACAGCTCACTAAGGGGAGAAAACAGTCACAAACAAGAT +
Preference number: 5 (lower is better)
Translates to: ARTSRITRGLLLLGP*KYSSLRGENSHKQD
Trigger: ATCTTGTTTGTGACTGTTTTCTCCCCTTAGTGAGCTGTATTTTCAAGGCCCTAGCAGCAACAAGCCTCGTGTGATCCGGGAAGTGCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 90 bp GCAGAAGTGCCCCTCCTTTCTGCCTGCTCAGAAAACATCAGTATCTaGGCAGCCTCTCTACAGAAGCTTAAACGCCTCGCCCTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: AEVPLLSACSENISI*AASLQKLKRLALCL
Trigger: CAAACAAAGGGCGAGGCGTTTAAGCTTCTGTAGAGAGGCTGCTCAGATACTGATGTTTTCTGAGCAGGCAGAAAGGAGGGGCACTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
CDS CCA 90 bp AGGATTGGCAAGAAAATACCAGTGACGCTGACGTGGTCTCCAGGCTaGGCAATCCTTGTGTTCTCTCCTTCTACCAGCACCGTGATACTA +
Preference number: 5 (lower is better)
Translates to: RIGKKIPVTLTWSPG*AILVFSPSTSTVIL
Trigger: TAGTATCACGGTGCTGGTAGAAGGAGAGAACACAAGGATTGCCCAGCCTGGAGACCACGTCAGCGTCACTGGTATTTTCTTGCCAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS-3UTR CAA 90 bp TCACATCTTCTTTCTCCACCACATCCACCATTCTCAGACGTGCCAGAGCAGTGGTGGCATTCTCACAAATaGAGTCCACCAACTCGGGGT +
Preference number: 5 (lower is better)
Translates to: SHLLSPPHPPFSDVPEQWWHSHK*SPPTRG
Trigger: ACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCA...CCACTGCTCTGGCACGTCTGAGAATGGTGGATGTGGTGGAGAAAGAAGATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAGGAGCCCCGGCCTGTaGTGTACTGGCTGCGAGGCG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRSPGL*CTGCEA
Trigger: CGCCTCGCAGCCAGTACACAACAGGCCGGGGCTCCT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGCACACGCGTTCTTTaGTTCCGGGGCCGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRTRVL*FRGRRA
Trigger: CGCCCTGCGGCCCCGGAACAAAAGAACGCGTGTGCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCCGGCCAACCGAAATaGGCGCGAAACGTCGCCCCC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKAGQPK*ARNVAP
Trigger: GGGGGCGACGTTTCGCGCCAATTTCGGTTGGCCGGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS GCA 90 bp TCTGAGCAGCCTCTCTACAGAAGCTTAAACGCCTCGCCCTTTGTTTaGCATTGTTCTCTAACCACTCACTTCCCTCTCCTTGTACTGAGG +
Preference number: 5 (lower is better)
Translates to: SEQPLYRSLNASPFV*HCSLTTHFPLLVLR
Trigger: CCTCAGTACAAGGAGAGGGAAGTGAGTGGTTAGAGAACAATGGCAAACAAAGGGCGAGGCGTTTAAGCTTCTGTAGAGAGGCTGCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCCAACCGTAGGTCATaGTCTCGGTCGGGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKANRRS*SRSGRS
Trigger: GGACCGGCCCGACCGAGACAATGACCTACGGTTGGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGCGGGCTCAGAGGTCTaGCTCCTGGGGAAGCTGAGA +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKAGSEV*LLGKLR
Trigger: TCTCAGCTTCCCCAGGAGCAAGACCTCTGAGCCCGC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303887.10
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGCCCTCCTGAGCGGTaGGTTTGGCACTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRPPER*VWHSWL
Trigger: AAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS TCA 90 bp CAGTGCCTTCTTCACATCTTCATGCCCGTATATTTCTGGGGCGATTaGAGCTGCCAGCTTTTCGTAGAAATCCTCCTCTGCAATTTGCCT +
Preference number: 5 (lower is better)
Translates to: QCLLHIFMPVYFWGD*SCQLFVEILLCNLP
Trigger: AGGCAAATTGCAGAGGAGGATTTCTACGAAAAGCTGGCAGCTTCAATCGCCCCAGAAATATACGGGCATGAAGATGTGAAGAAGGCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGAGCCAGTCCAGCCATaGGCCATCACACCCAGAGAC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKEPVQP*AITPRD
Trigger: GTCTCTGGGTGTGATGGCCAATGGCTGGACTGGCTC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354230.7
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGTGAGAATGCCGGCCTaGGCAATGGAGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKVRMPA*AMEMVC
Trigger: GCAGACCATCTCCATTGCCAAGGCCGGCATTCTCAC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAATGGAGCAGCGGGCATaGAGTGTGGTGAGAATGCCG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKMEQRA*SVVRMP
Trigger: CGGCATTCTCACCACACTCAATGCCCGCTGCTCCAT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACGTGTCCGGGAAGCATaGACCTGCCAGACATTGAGC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKRVREA*TCQTLS
Trigger: GCTCAATGTCTGGCAGGTCAATGCTTCCCGGACACG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAAGAGGACCCCAGGGTaGCAAGCAGGCTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKKRTPG*QAGWNQ
Trigger: CTGATTCCAGCCTGCTTGCAACCCTGGGGTCCTCTT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTGAGGCAGCAGCTCTaGTACGGCATCAGCAAAGAG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLRQQL*YGISKE
Trigger: CTCTTTGCTGATGCCGTACAAGAGCTGCTGCCTCAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAATCCTCCTCTGCAATTaGCCTCAGCTCCTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKILLCN*PQLLPG
Trigger: ACCAGGGAGGAGCTGAGGCAAATTGCAGAGGAGGAT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTAGCTGTCTGCCCCTaGTCTCCTAGAAGAGAGTCC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLAVCP*SPRRES
Trigger: GGACTCTCTTCTAGGAGACAAGGGGCAGACAGCTAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGTGGCCACCACCATCTaGGGTTTGACTTCAGAGACA +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKVATTI*GLTSET
Trigger: TGTCTCTGAAGTCAAACCCAAGATGGTGGTGGCCAC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACAGGCTGGGCAATCCTaGTGTTCTCTCCTTCTACCA +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKQAGQS*CSLLLP
Trigger: TGGTAGAAGGAGAGAACACAAGGATTGCCCAGCCTG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCGGCCTCAGCCATCTaGTCGAACTCATCAATGCAG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSASAI*SNSSMQ
Trigger: CTGCATTGATGAGTTCGACAAGATGGCTGAGGCCGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAACTTTCGCCGTCTTCTaGTCTACTCTCCAGAACGGC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKTFAVF*STLQNG
Trigger: GCCGTTCTGGAGAGTAGACAAGAAGACGGCGAAAGT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATGGCATTCTCACAAATaGAGTCCACCAACTCGGGGT +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKWHSHK*SPPTRG
Trigger: ACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAACCACCATCTTGGGTTaGACTTCAGAGACACGAGTG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKTTILG*TSETRV
Trigger: CACTCGTGTCTCTGAAGTCAAACCCAAGATGGTGGT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACCCATCAGACAGATGTaGATGTTGCCCCGGATTTTC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKPIRQM*MLPRIF
Trigger: GAAAATCCGGGGCAACATCAACATCTGTCTGATGGG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAAACTGGTTCCCATACTaGAACTGCTTCTTCCCGAGT +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKNWFPY*NCFFPS
Trigger: ACTCGGGAAGAAGCAGTTCAAGTATGGGAACCAGTT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTCATCTCCTGGAATTaGATGAATCTGGAGCCCCGT +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKFISWN*MNLEPR
Trigger: ACGGGGCTCCAGATTCATCAAATTCCAGGAGATGAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAATATTTCTGGGGCGATaGAAGCTGCCAGCTTTTCGT +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKIFLGR*KLPAFR
Trigger: ACGAAAAGCTGGCAGCTTCAATCGCCCCAGAAATAT...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATTGACCTGCCAGACATaGAGCTCCTCATATTCATCC +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLTCQT*SSSYSS
Trigger: GGATGAATATGAGGAGCTCAATGTCTGGCAGGTCAA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAAGTTGCTGCTAGGGCCTaGAAAATACAGCTCACTAAG +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKVAARA*KIQLTK
Trigger: CTTAGTGAGCTGTATTTTCAAGGCCCTAGCAGCAAC...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAACTGATCACTATGTTCTaGCATCTTCATCTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKLITMF*HLHLLE
Trigger: TTCCAGGAGATGAAGATGCAAGAACATAGTGATCAG...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS-3UTR CAA 90 bp GAAGTCAGGCCCAGGCTAGAAGATGACAATCTACAAACACTTTTATTAGCAAAATCATCATCCTCACTCTaGTTCATCTTCACAATCCGA +
Preference number: 5 (lower is better)
Translates to: EVRPRLEDDNLQTLLLAKSSSSL*FIFTIR
Trigger: TCGGATTGTGAAGATGAACAAGAGTGAGGATGATGA...TTTTGCTAATAAAAGTGTTTGTAGATTGTCATCTTCTAGCCTGGGCCTGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000621318.4
CDS CAA 90 bp TCGCTGCCGAGGGCCGTGCGGCCGCGCTTGGCGGGCTCAGAGGTCTaGCTCCTGGGGAAGCTGAGAATCTCCGCGCGGTGGACTGTGGCC +
Preference number: 6 (lower is better)
Translates to: SLPRAVRPRLAGSEV*LLGKLRISARWTVA
Trigger: GGCCACAGTCCACCGCGCGGAGATTCTCAGCTTCCCCAGGAGCAAGACCTCTGAGCCCGCCAAGCGCGGCCGCACGGCCCTCGGCAGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000463722.5
ENST00000621318.4
CDS GCA 72 bp CGCGTAGTCCTTCAGTGCCATCGCTGCCGAGGGCCGTaGGGCCGCGCTTGGCGGGCTCAGAGGTCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: RVVLQCHRCRGP*GRAWRAQRSCS
Trigger: GGAGCAAGACCTCTGAGCCCGCCAAGCGCGGCCGCACGGCCCTCGGCAGCGATGGCACTGAAGGACTACGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000463722.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp AGGGCCGTGCGGCCGCGCTTGGCGGGCTCAGAGGTCTaGCTCCTGGGGAAGCTGAGAATCTCCGCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: RAVRPRLAGSEV*LLGKLRISARW
Trigger: CCACCGCGCGGAGATTCTCAGCTTCCCCAGGAGCAAGACCTCTGAGCCCGCCAAGCGCGGCCGCACGGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000463722.5
ENST00000621318.4
CDS CAA 90 bp CACAGCTCGGGATTCCTCCGCCCAGGGCGGGAGCCAGTCCAGCCATaGGCCATCACACCCAGAGACACCGCGATCCCAGCCCACTGCCGC +
Preference number: 6 (lower is better)
Translates to: HSSGFLRPGREPVQP*AITPRDTAIPAHCR
Trigger: GCGGCAGTGGGCTGGGATCGCGGTGTCTCTGGGTGTGATGGCCAATGGCTGGACTGGCTCCCGCCCTGGGCGGAGGAATCCCGAGCTGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
CDS TCA 72 bp GCGCCCAGGGCCAGCCTGTGTCGCAGGATCCTTCACTaGGTCCTTCCACCCGCCAGTCCGCGGGGACAGTGG +
Preference number: 6 (lower is better)
Translates to: APRASLCRRILH*VLPPASPRGQW
Trigger: CCACTGTCCCCGCGGACTGGCGGGTGGAAGGACTCAGTGAAGGATCCTGCGACACAGGCTGGCCCTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS GCA 72 bp GCCATCACACCCAGAGACACCGCGATCCCAGCCCACTaGCGCCTTTCCCGGGCCCGAGCGAAGCTCCGGATC +
Preference number: 6 (lower is better)
Translates to: AITPRDTAIPAH*RLSRARAKLRI
Trigger: GATCCGGAGCTTCGCTCGGGCCCGGGAAAGGCGGCAGTGGGCTGGGATCGCGGTGTCTCTGGGTGTGATGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
CDS CCA 72 bp GATTCCTCCGCCCAGGGCGGGAGCCAGTCCAGCCATTaGCCATCACACCCAGAGACACCGCGATCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: DSSAQGGSQSSH*PSHPETPRSQP
Trigger: GGGCTGGGATCGCGGTGTCTCTGGGTGTGATGGCCAATGGCTGGACTGGCTCCCGCCCTGGGCGGAGGAATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
CDS CAA 72 bp GGATTCCTCCGCCCAGGGCGGGAGCCAGTCCAGCCATaGGCCATCACACCCAGAGACACCGCGATCCCAGCC +
Preference number: 6 (lower is better)
Translates to: GFLRPGREPVQP*AITPRDTAIPA
Trigger: GGCTGGGATCGCGGTGTCTCTGGGTGTGATGGCCAATGGCTGGACTGGCTCCCGCCCTGGGCGGAGGAATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
CDS CAA 90 bp CGTAGTCCTTCAGTGCCATCGCTGCCGAGGGCCGTGCGGCCGCGCTaGGCGGGCTCAGAGGTCTTGCTCCTGGGGAAGCTGAGAATCTCC +
Preference number: 6 (lower is better)
Translates to: RSPSVPSLPRAVRPR*AGSEVLLLGKLRIS
Trigger: GGAGATTCTCAGCTTCCCCAGGAGCAAGACCTCTGAGCCCGCCAAGCGCGGCCGCACGGCCCTCGGCAGCGATGGCACTGAAGGACTACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000463722.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 90 bp GGCGGAGGAGAATCGCTCTTAAAGGGCCAGCGCACACGCGTTCTTTaGTTCCGGGGCCGCAGGGCGGGGCAGGCCCGACTTTCGCCGTCT +
Preference number: 6 (lower is better)
Translates to: GGGESLLKGQRTRVL*FRGRRAGQARLSPS
Trigger: AGACGGCGAAAGTCGGGCCTGCCCCGCCCTGCGGCCCCGGAACAAAAGAACGCGTGTGCGCTGGCCCTTTAAGAGCGATTCTCCTCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS GCA 72 bp CTTCTTCACCTCCCGCTAGCCGCAAGCCAATCACCGTaGGGGCCTAGAATGAGTGACGGGGAGGCGGTGCGG +
Preference number: 6 (lower is better)
Translates to: LLHLPLAASQSP*GPRMSDGEAVR
Trigger: CCGCACCGCCTCCCCGTCACTCATTCTAGGCCCGCACGGTGATTGGCTTGCGGCTAGCGGGAGGTGAAGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS CAA 72 bp GAATCGCTCTTAAAGGGCCAGCGCACACGCGTTCTTTaGTTCCGGGGCCGCAGGGCGGGGCAGGCCCGACTT +
Preference number: 6 (lower is better)
Translates to: ESLLKGQRTRVL*FRGRRAGQARL
Trigger: AAGTCGGGCCTGCCCCGCCCTGCGGCCCCGGAACAAAAGAACGCGTGTGCGCTGGCCCTTTAAGAGCGATTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS TCA 72 bp TCTGGAGCCCCGTGTCTGCAGATACAGCCGCCCTCCTaGGCGGTTGGTTTGGCACTCCTGGCTTGGGCACAT +
Preference number: 6 (lower is better)
Translates to: SGAPCLQIQPPS*AVGLALLAWAH
Trigger: ATGTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGACACGGGGCTCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS GCA 72 bp AACTGGGCGGGTGTGAAGCCACGAGATACACAGCGCTaGTCTGCCTCAGAGAACCGGACACTTCGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: NWAGVKPRDTQR*SASENRTLRPP
Trigger: AGGGGGCCGAAGTGTCCGGTTCTCTGAGGCAGAGCAGCGCTGTGTATCTCGTGGCTTCACACCCGCCCAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 72 bp GTCTTGCTCCTGGGGAAGCTGAGAATCTCCGCGCGGTaGACTGTGGCCGGCCAACCGAAATTGGCGCGAAAC +
Preference number: 6 (lower is better)
Translates to: VLLLGKLRISAR*TVAGQPKLARN
Trigger: GTTTCGCGCCAATTTCGGTTGGCCGGCCACAGTCCACCGCGCGGAGATTCTCAGCTTCCCCAGGAGCAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000343023.10
ENST00000463722.5
ENST00000621318.4
CDS CCA 72 bp CACAATCTGCGCATGAGTTCAGCAGGGTACTGGTTCTaGGGGCTTCGGACCATCCCAGGGTCCCGACTCCGC +
Preference number: 6 (lower is better)
Translates to: HNLRMSSAGYWF*GLRTIPGSRLR
Trigger: GCGGAGTCGGGACCCTGGGATGGTCCGAAGCCCCCAGAACCAGTACCCTGCTGAACTCATGCGCAGATTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp GCCAACCGTAGGTCATTGTCTCGGTCGGGCCGGTCCTaGATCAGCCAGAGGAGGTCAAACCGGGAGAGCAGT +
Preference number: 6 (lower is better)
Translates to: ANRRSLSRSGRS*ISQRRSNRESS
Trigger: ACTGCTCTCCCGGTTTGACCTCCTCTGGCTGATTCAGGACCGGCCCGACCGAGACAATGACCTACGGTTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000491245.6
ENST00000621318.4
CDS CCA 72 bp TCAAATCTGCGCATGAGTTCAGCAGGGTACTGGTTCTaGGGGCTTCGGACCATCCCAGGGTCCCGACTCCGC +
Preference number: 6 (lower is better)
Translates to: SNLRMSSAGYWF*GLRTIPGSRLR
Trigger: GCGGAGTCGGGACCCTGGGATGGTCCGAAGCCCCCAGAACCAGTACCCTGCTGAACTCATGCGCAGATTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000425308.5
CDS CAA 72 bp CCCCGTGTCTGCAGATACAGCCGCCCTCCTGAGCGGTaGGTTTGGCACTCCTGGCTTGGGCACATGATCAGA +
Preference number: 6 (lower is better)
Translates to: PRVCRYSRPPER*VWHSWLGHMIR
Trigger: TCTGATCATGTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGACACGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp CATATTCATCCAGAGCCGCCTGGAACTGGGCGGGTGTaGAGCCACGAGATACACAGCGCTGCTCTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: HIHPEPPGTGRV*SHEIHSAALPQ
Trigger: CTGAGGCAGAGCAGCGCTGTGTATCTCGTGGCTTCACACCCGCCCAGTTCCAGGCGGCTCTGGATGAATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 72 bp GTCTGCAGATACAGCCGCCCTCCTGAGCGGTTGGTTTaGCACTCCTGGCTTGGGCACATGATCAGAGGCATG +
Preference number: 6 (lower is better)
Translates to: VCRYSRPPERLV*HSWLGHMIRGM
Trigger: CATGCCTCTGATCATGTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp CCGCAGGGCGGGGCAGGCCCGACTTTCGCCGTCTTCTaGTCTACTCTCCAGAACGGCCATGATTTCCCAATT +
Preference number: 6 (lower is better)
Translates to: PQGGAGPTFAVF*STLQNGHDFPI
Trigger: AATTGGGAAATCATGGCCGTTCTGGAGAGTAGACAAGAAGACGGCGAAAGTCGGGCCTGCCCCGCCCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS CAA 90 bp GTTCCGGGGCCGCAGGGCGGGGCAGGCCCGACTTTCGCCGTCTTCTaGTCTACTCTCCAGAACGGCCATGATTTCCCAATTCTTCATTCT +
Preference number: 6 (lower is better)
Translates to: VPGPQGGAGPTFAVF*STLQNGHDFPILHS
Trigger: AGAATGAAGAATTGGGAAATCATGGCCGTTCTGGAGAGTAGACAAGAAGACGGCGAAAGTCGGGCCTGCCCCGCCCTGCGGCCCCGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343023.10
ENST00000621318.4
CDS CAA 90 bp CGGCATCAGCAAAGAGCTTCGCGTAGCGCCTGGCATTCTCACAAATaGAGTCCACCAACTCGGGGTCATCCTCGGCTACGTCGTCCAGGT +
Preference number: 6 (lower is better)
Translates to: RHQQRASRSAWHSHK*SPPTRGHPRLRRPG
Trigger: ACCTGGACGACGTAGCCGAGGATGACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCAGGCGCTACGCGAAGCTCTTTGCTGATGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 90 bp AATCTGGAGCCCCGTGTCTGCAGATACAGCCGCCCTCCTGAGCGGTaGGTTTGGCACTCCTGGCTTGGGCACATGATCAGAGGCATGAAA +
Preference number: 6 (lower is better)
Translates to: NLEPRVCRYSRPPER*VWHSWLGHMIRGMK
Trigger: TTTCATGCCTCTGATCATGTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGACACGGGGCTCCAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp CTGCTCTGCCTCAGAGAACCGGACACTTCGGCCCCCTaGGACCAGTTCACGGACGGTGGCAAATATCACATC +
Preference number: 6 (lower is better)
Translates to: LLCLREPDTSAP*DQFTDGGKYHI
Trigger: GATGTGATATTTGCCACCGTCCGTGAACTGGTCTCAGGGGGCCGAAGTGTCCGGTTCTCTGAGGCAGAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 72 bp TACAGCCGCCCTCCTGAGCGGTTGGTTTGGCACTCCTaGCTTGGGCACATGATCAGAGGCATGAAAGTGGGA +
Preference number: 6 (lower is better)
Translates to: YSRPPERLVWHS*LGHMIRGMKVG
Trigger: TCCCACTTTCATGCCTCTGATCATGTGCCCAAGCCAGGAGTGCCAAACCAACCGCTCAGGAGGGCGGCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp GGGCTACGCACCCATGTCCTCTTAGGTGTCCCTCCTTaGGCTCTGCCACTTCCTCACAGTGTAGGAGGGACA +
Preference number: 6 (lower is better)
Translates to: GLRTHVLLGVPP*ALPLPHSVGGT
Trigger: TGTCCCTCCTACACTGTGAGGAAGTGGCAGAGCCAAAGGAGGGACACCTAAGAGGACATGGGTGCGTAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493352.1
CDS GCA 72 bp CATGAAAGTGGGAGACTGGATCGGCTGGTAGGTCTCTaGCCCACACTGGTCACAAGTGTAAGTGGCCACCAC +
Preference number: 6 (lower is better)
Translates to: HESGRLDRLVGL*PTLVTSVSGHH
Trigger: GTGGTGGCCACTTACACTTGTGACCAGTGTGGGGCAGAGACCTACCAGCCGATCCAGTCTCCCACTTTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 72 bp ACCCTGTACCACCTGTCGGAACCCAGTGCGCAGGATTaGCAAGAAAATACCAGTGACGCTGACGTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: TLYHLSEPSAQD*QENTSDADVVS
Trigger: GGAGACCACGTCAGCGTCACTGGTATTTTCTTGCCAATCCTGCGCACTGGGTTCCGACAGGTGGTACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 72 bp GCAGGGAACAAGAGGACCCCAGGGTTGCAAGCAGGCTaGAATCAGACAAAAGTGATCCGTGTCCGGGAAGCA +
Preference number: 6 (lower is better)
Translates to: AGNKRTPGLQAG*NQTKVIRVREA
Trigger: TGCTTCCCGGACACGGATCACTTTTGTCTGATTCCAGCCTGCTTGCAACCCTGGGGTCCTCTTGTTCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 90 bp CAGACAAAAGTGATCCGTGTCCGGGAAGCATTGACCTGCCAGACATaGAGCTCCTCATATTCATCCAGAGCCGCCTGGAACTGGGCGGGT +
Preference number: 6 (lower is better)
Translates to: QTKVIRVREALTCQT*SSSYSSRAAWNWAG
Trigger: ACCCGCCCAGTTCCAGGCGGCTCTGGATGAATATGAGGAGCTCAATGTCTGGCAGGTCAATGCTTCCCGGACACGGATCACTTTTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 90 bp CCCTTTTTAGGGCTACGCACCCATGTCCTCTTAGGTGTCCCTCCTTaGGCTCTGCCACTTCCTCACAGTGTAGGAGGGACAAGCTTTCCC +
Preference number: 6 (lower is better)
Translates to: PFLGLRTHVLLGVPP*ALPLPHSVGGTSFP
Trigger: GGGAAAGCTTGTCCCTCCTACACTGTGAGGAAGTGGCAGAGCCAAAGGAGGGACACCTAAGAGGACATGGGTGCGTAGCCCTAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493352.1
CDS TCA 72 bp TCGTCCAGGTCCACATACAGAGCCACCTGTTCCCGATaGGCCAGCCGAACCAACTGGTTCCCATACTTGAAC +
Preference number: 6 (lower is better)
Translates to: SSRSTYRATCSR*ASRTNWFPYLN
Trigger: GTTCAAGTATGGGAACCAGTTGGTTCGGCTGGCTCATCGGGAACAGGTGGCTCTGTATGTGGACCTGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000465688.1
ENST00000465738.1
ENST00000467516.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp AAAGAGCTTCGCGTAGCGCCTGGCATTCTCACAAATTaGGTCCACCAACTCGGGGTCATCCTCGGCTACGTC +
Preference number: 6 (lower is better)
Translates to: KELRVAPGILTN*VHQLGVILGYV
Trigger: GACGTAGCCGAGGATGACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCAGGCGCTACGCGAAGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp CATCTTTCCCGACAGAGACCACTCACAATCTGCGCATaGGTTCAGCAGGGTACTGGTTCTGGGGGCTTCGGA +
Preference number: 6 (lower is better)
Translates to: HLSRQRPLTICA*VQQGTGSGGFG
Trigger: TCCGAAGCCCCCAGAACCAGTACCCTGCTGAACTCATGCGCAGATTGTGAGTGGTCTCTGTCGGGAAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS GCA 72 bp ATCTCCTGGAATTTGATGAATCTGGAGCCCCGTGTCTaGAGATACAGCCGCCCTCCTGAGCGGTTGGTTTGG +
Preference number: 6 (lower is better)
Translates to: ISWNLMNLEPRV*RYSRPPERLVW
Trigger: CCAAACCAACCGCTCAGGAGGGCGGCTGTATCTGCAGACACGGGGCTCCAGATTCATCAAATTCCAGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 72 bp TACCTGTACCACCTGTCGGAACCCAGTGCGCAGGATTaGCAAGAAAATACCAGTGACGCTGACGTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: YLYHLSEPSAQD*QENTSDADVVS
Trigger: GGAGACCACGTCAGCGTCACTGGTATTTTCTTGCCAATCCTGCGCACTGGGTTCCGACAGGTGGTACAGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463722.5
CDS CAA 72 bp CAAAGAGCTTCGCGTAGCGCCTGGCATTCTCACAAATaGAGTCCACCAACTCGGGGTCATCCTCGGCTACGT +
Preference number: 6 (lower is better)
Translates to: QRASRSAWHSHK*SPPTRGHPRLR
Trigger: ACGTAGCCGAGGATGACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCAGGCGCTACGCGAAGCTCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp TACCACTTCCCTCTCCTTGTACTGAGGCAGCAGCTCTaGTACGGCATCAGCAAAGAGCTTCGCGTAGCGCCT +
Preference number: 6 (lower is better)
Translates to: YHFPLLVLRQQL*YGISKELRVAP
Trigger: AGGCGCTACGCGAAGCTCTTTGCTGATGCCGTACAAGAGCTGCTGCCTCAGTACAAGGAGAGGGAAGTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp GTGATCCGTGTCCGGGAAGCATTGACCTGCCAGACATaGAGCTCCTCATATTCATCCAGAGCCGCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: VIRVREALTCQT*SSSYSSRAAWN
Trigger: GTTCCAGGCGGCTCTGGATGAATATGAGGAGCTCAATGTCTGGCAGGTCAATGCTTCCCGGACACGGATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp ACTCACTTCCCTCTCCTTGTACTGAGGCAGCAGCTCTaGTACGGCATCAGCAAAGAGCTTCGCGTAGCGCCT +
Preference number: 6 (lower is better)
Translates to: THFPLLVLRQQL*YGISKELRVAP
Trigger: AGGCGCTACGCGAAGCTCTTTGCTGATGCCGTACAAGAGCTGCTGCCTCAGTACAAGGAGAGGGAAGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
CDS TCA 72 bp CCTTGGCAATGGAGATGGTCTGGCATTCTCACAAATTaGGTCCACCAACTCGGGGTCATCCTCGGCTACGTC +
Preference number: 6 (lower is better)
Translates to: PWQWRWSGILTN*VHQLGVILGYV
Trigger: GACGTAGCCGAGGATGACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCAGACCATCTCCATTGCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491245.6
CDS GCA 72 bp GTTTCTAACCAGCGAAGAATAAAGAGCCCGTGGCAGTaGACAGGGCCATCCAACATCTCCCCAGGGGAATTC +
Preference number: 6 (lower is better)
Translates to: VSNQRRIKSPWQ*TGPSNISPGEF
Trigger: GAATTCCCCTGGGGAGATGTTGGATGGCCCTGTGCACTGCCACGGGCTCTTTATTCTTCGCTGGTTAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000425308.5
ENST00000465738.1
ENST00000467516.5
ENST00000485286.5
CDS CCA 72 bp CTTGTACGGCATCAGCAAAGAGCTTCGCGTAGCGCCTaGCATTCTCACAAATTGAGTCCACCAACTCGGGGT +
Preference number: 6 (lower is better)
Translates to: LVRHQQRASRSA*HSHKLSPPTRG
Trigger: ACCCCGAGTTGGTGGACTCAATTTGTGAGAATGCCAGGCGCTACGCGAAGCTCTTTGCTGATGCCGTACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp CCCGATGAGCCAGCCGAACCAACTGGTTCCCATACTTaGACTGCTTCTTCCCGAGTTCATCATCCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: PDEPAEPTGSHT*TASSRVHHPGR
Trigger: TCTACCAGGATGATGAACTCGGGAAGAAGCAGTTCAAGTATGGGAACCAGTTGGTTCGGCTGGCTCATCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000465688.1
ENST00000465738.1
ENST00000467516.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp CCCCTCCTTTCTGCCTGCTCAGAAAACATCAGTATCTaGGCAGCCTCTCTACAGAAGCTTAAACGCCTCGCC +
Preference number: 6 (lower is better)
Translates to: PLLSACSENISI*AASLQKLKRLA
Trigger: GGCGAGGCGTTTAAGCTTCTGTAGAGAGGCTGCTCAGATACTGATGTTTTCTGAGCAGGCAGAAAGGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5
CDS GCA 72 bp ACTAGCAGGAGCAGCAGTGCCTTCTTCACATCTTCATaGCCGTATATTTCTGGGGCGATTGAAGCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: TSRSSSAFFTSS*PYISGAIEAAS
Trigger: GCTGGCAGCTTCAATCGCCCCAGAAATATACGGGCATGAAGATGTGAAGAAGGCACTGCTGCTCCTGCTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CCA 72 bp AAGAAAATACCAGTGACGCTGACGTGGTCTCCAGGCTaGGCAATCCTTGTGTTCTCTCCTTCTACCAGCACC +
Preference number: 6 (lower is better)
Translates to: KKIPVTLTWSPG*AILVFSPSTST
Trigger: GGTGCTGGTAGAAGGAGAGAACACAAGGATTGCCCAGCCTGGAGACCACGTCAGCGTCACTGGTATTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 90 bp ATCTTTATTTACCACTTCCCTCTCCTTGTACTGAGGCAGCAGCTCTaGTACGGCATCAGCAAAGAGCTTCGCGTAGCGCCTGGCATTCTC +
Preference number: 6 (lower is better)
Translates to: IFIYHFPLLVLRQQL*YGISKELRVAPGIL
Trigger: GAGAATGCCAGGCGCTACGCGAAGCTCTTTGCTGATGCCGTACAAGAGCTGCTGCCTCAGTACAAGGAGAGGGAAGTGGTAAATAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp GGGCAATCCTTGTGTTCTCTCCTTCTACCAGCACCGTaGTACTACGAGGGATATTTCCCACAGGCACCTGAT +
Preference number: 6 (lower is better)
Translates to: GQSLCSLLLPAP*YYEGYFPQAPD
Trigger: ATCAGGTGCCTGTGGGAAATATCCCTCGTAGTATCACGGTGCTGGTAGAAGGAGAGAACACAAGGATTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp TCCCGGATCACACGAGGCTTGTTGCTGCTAGGGCCTTaGAAATACAGCTCACTAAGGGGAGAAAACAGTCAC +
Preference number: 6 (lower is better)
Translates to: SRITRGLLLLGP*KYSSLRGENSH
Trigger: GTGACTGTTTTCTCCCCTTAGTGAGCTGTATTTTCAAGGCCCTAGCAGCAACAAGCCTCGTGTGATCCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354230.7
ENST00000463722.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp TTCCCGGATCACACGAGGCTTGTTGCTGCTAGGGCCTaGAAAATACAGCTCAAATCTGCGCATGAGTTCAGC +
Preference number: 6 (lower is better)
Translates to: FPDHTRLVAARA*KIQLKSAHEFS
Trigger: GCTGAACTCATGCGCAGATTTGAGCTGTATTTTCAAGGCCCTAGCAGCAACAAGCCTCGTGTGATCCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000425308.5
CDS CAA 90 bp GCAGTGCCTTCTTCACATCTTCATGCCCGTATATTTCTGGGGCGATaGAAGCTGCCAGCTTTTCGTAGAAATCCTCCTCTGCAATTTGCC +
Preference number: 6 (lower is better)
Translates to: AVPSSHLHARIFLGR*KLPAFRRNPPLQFA
Trigger: GGCAAATTGCAGAGGAGGATTTCTACGAAAAGCTGGCAGCTTCAATCGCCCCAGAAATATACGGGCATGAAGATGTGAAGAAGGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp AGGACATCTTTATTTACCACTTCCCTCTCCTTGTACTaGGGCAGCAGCTCTTGTACGGCATCAGCAAAGAGC +
Preference number: 6 (lower is better)
Translates to: RTSLFTTSLSLY*GSSSCTASAKS
Trigger: GCTCTTTGCTGATGCCGTACAAGAGCTGCTGCCTCAGTACAAGGAGAGGGAAGTGGTAAATAAAGATGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000425308.5
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS TCA 72 bp CTTCACATCTTCATGCCCGTATATTTCTGGGGCGATTaGAGCTGCCAGCTTTTCGTAGAAATCCTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: LHIFMPVYFWGD*SCQLFVEILLC
Trigger: GCAGAGGAGGATTTCTACGAAAAGCTGGCAGCTTCAATCGCCCCAGAAATATACGGGCATGAAGATGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp TGGAATCAGACAAAAGTGATCCGTGTCCGGGAAGCATaGACCTGCCAGACATTGAGCTCCTCATATTCATCC +
Preference number: 6 (lower is better)
Translates to: WNQTKVIRVREA*TCQTLSSSYSS
Trigger: GGATGAATATGAGGAGCTCAATGTCTGGCAGGTCAATGCTTCCCGGACACGGATCACTTTTGTCTGATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000303887.10
ENST00000343023.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp TCTTCACATCTTCATGCCCGTATATTTCTGGGGCGATaGAAGCTGCCAGCTTTTCGTAGAAATCCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: SSHLHARIFLGR*KLPAFRRNPPL
Trigger: CAGAGGAGGATTTCTACGAAAAGCTGGCAGCTTCAATCGCCCCAGAAATATACGGGCATGAAGATGTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000303887.10
ENST00000354230.7
ENST00000485286.5
ENST00000489841.5
ENST00000621318.4
CDS CAA 72 bp CTACAGAAGCTTAAACGCCTCGCCCTTTGTTTGCCATaGTTCTCTAACCACTCACTTCCCTCTCCTTGTACT +
Preference number: 6 (lower is better)
Translates to: LQKLKRLALCLP*FSNHSLPSPCT
Trigger: AGTACAAGGAGAGGGAAGTGAGTGGTTAGAGAACAATGGCAAACAAAGGGCGAGGCGTTTAAGCTTCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463722.5
ENST00000465688.1
ENST00000467516.5