RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCM5 (Homo sapiens)

Ensembl gene IDs: ENSG00000100297

Ensembl transcript IDs: ENST00000216122.9, ENST00000382011.9, ENST00000416905.1, ENST00000417343.1, ENST00000444778.1, ENST00000451351.5, ENST00000464908.5, ENST00000465557.1, ENST00000493076.5, ENST00000493569.5

Found 442 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGGCGGGCGCCCAGAGGCAGCAGGACACTACAGCTCCTTCCTCTaGGGCAGAAAGGAGGGTGCCTGGGAAGTTCGAGGGCTGCAGTGG +
Preference number: 1 (lower is better)
Translates to: RGGRPEAAGHYSSFL*GRKEGAWEVRGLQW
Trigger: CCACTGCAGCCCTCGAACTTCCCAGGCACCCTCCTTTCTGCCCCAGAGGAAGGAGCTGTAGTGTCCTGCTGCCTCTGGGCGCCCGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
3UTR TCA 90 bp GGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATaGGGGCACGATGGAGGTGACAGGTCACCGAGTGCACAAACCCAC +
Preference number: 1 (lower is better)
Translates to: GQSASRPCSLTLTLP*GHDGGDRSPSAQTH
Trigger: GTGGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR CCA 90 bp CCCAAGGCCACACAGTTACACGTGGCCCACCAGGAAAGAACTGGCTaGAGTCCTAGTTCCTGCCTGGTGGCCACTACATTCCCCTCACTA +
Preference number: 1 (lower is better)
Translates to: PKATQLHVAHQERTG*SPSSCLVATTFPSL
Trigger: TAGTGAGGGGAATGTAGTGGCCACCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR TCA 90 bp ACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCACGATGGAGGTaGCAGGTCACCGAGTGCACAAACCCACAGATACCTGAACACACC +
Preference number: 1 (lower is better)
Translates to: TLFPHTYPAMRARWR*QVTECTNPQIPEHT
Trigger: GGTGTGTTCAGGTATCTGTGGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR CCA 90 bp GCACAGAAAAGTGAAATGTCTCGCCCAAGGCCACACAGTTACACGTaGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCTGG +
Preference number: 1 (lower is better)
Translates to: AQKSEMSRPRPHSYT*PTRKELAGVLVPAW
Trigger: CCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACTTTTCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR TCA 90 bp ACGATGGAGGTGACAGGTCACCGAGTGCACAAACCCACAGATACCTaGACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACT +
Preference number: 1 (lower is better)
Translates to: TMEVTGHRVHKPTDT*THRGFIINGCQKHT
Trigger: AGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR-3UTR CCA 90 bp CTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTGTTCGAGGGCTGCAGTaGGGAGGCAGAGGTCCCAGC +
Preference number: 2 (lower is better)
Translates to: LSGRSKSETLASLPPDPVVRGLQ*GGRGPS
Trigger: GCTGGGACCTCTGCCTCCCCACTGCAGCCCTCGAAC...AACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR-3UTR GCA 90 bp AAAAGTGAAATGTCTCGCCCAAGGCCACACAGTTACACGTGGCCCACCAGGAAACCCTCACACTTACCCTaGCATGAGGGCACGATGGAG +
Preference number: 2 (lower is better)
Translates to: KSEMSRPRPHSYTWPTRKPSHLP*HEGTME
Trigger: CTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGGG...TTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR-3UTR CCA 90 bp AAAAGTGAAATGTCTCGCCCAAGGCCACACAGTTACACGTGGCCCACCAGGAAACAGCAACATTGTCAATaGCAGGCAGCGGCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: KSEMSRPRPHSYTWPTRKQQHCQ*QAAAGG
Trigger: CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTG...TTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR-3UTR CCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGAGAAAGGAGGGTGCCTaGGAAGTTCGAGGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: FIINGCQKHTSQNRARGGRKEGA*EVRGLQ
Trigger: CTGCAGCCCTCGAACTTCCCAGGCACCCTCCTTTCT...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
3UTR-3UTR TCA 90 bp AGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCTGGAAACCCACAGATACCTaGACACACCGTGGCTTTATT +
Preference number: 2 (lower is better)
Translates to: SYTWPTRKELAGVLVPAWKPTDT*THRGFI
Trigger: AATAAAGCCACGGTGTGTTCAGGTATCTGTGGGTTT...CCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR-3UTR GCA 90 bp ACGACTCACTCCTCTGACTTAGGAGCTTCTCTAGGACAAGAAGCACGTCTTTTCATCTTTGTAGCGCAGTaGCTGGCACACAGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: TTHSSDLGASLGQEARLFIFVAQ*LAHRWA
Trigger: TGCCCACCTGTGTGCCAGGCACTGCGCTACAAAGAT...GAAAAGACGTGCTTCTTGTCCTAGAGAAGCTCCTAAGTCAGAGGAGTGAGTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451351.5
3UTR CAA 90 bp CATCCCTTCCTCTGTGGAGGAAATGACCACCGTGGAAGTTATCTGTaGGTCTTCACGACTCACTCCTCTGACTTAGGAGCTTCTCTAGGA +
Preference number: 2 (lower is better)
Translates to: HPFLCGGNDHRGSYL*VFTTHSSDLGASLG
Trigger: TCCTAGAGAAGCTCCTAAGTCAGAGGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTCCTCCACAGAGGAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
3UTR-3UTR CCA 90 bp AAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCAGCATCACTGTCACTAGTACCCAGAAGTCTGAGTaGCAGATCCAAGTCAGAAAC +
Preference number: 2 (lower is better)
Translates to: KVTEALGNTPSSSITVTSTQKSE*QIQVRN
Trigger: GTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGT...ACTAGTGACAGTGATGCTGGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR TCA 72 bp GCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATaGGGGCACGATGGAGGTGACAGGTCACCGAGTGCA +
Preference number: 3 (lower is better)
Translates to: ASRPCSLTLTLP*GHDGGDRSPSA
Trigger: TGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR TCA 72 bp CCTCACACTTACCCTGCCATGAGGGCACGATGGAGGTaGCAGGTCACCGAGTGCACAAACCCACAGATACCT +
Preference number: 3 (lower is better)
Translates to: PHTYPAMRARWR*QVTECTNPQIP
Trigger: AGGTATCTGTGGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR GCA 72 bp GCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTaGCTGGTGGCCACTACATTCCCCTCACTAACAGCT +
Preference number: 3 (lower is better)
Translates to: AHQERTGWSPSS*LVATTFPSLTA
Trigger: AGCTGTTAGTGAGGGGAATGTAGTGGCCACCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR-3UTR CAA 90 bp AAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCAGCATCACTGTCACTAGTGAGGTCCCAGCAACATaGTCAATGGCAGGCAGCGGC +
Preference number: 3 (lower is better)
Translates to: KVTEALGNTPSSSITVTSEVPAT*SMAGSG
Trigger: GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTC...ACTAGTGACAGTGATGCTGGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR TCA 72 bp CCGGAGCACTCAAGTCACGTGACTTACCCAGAAGTCTaGGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTC +
Preference number: 3 (lower is better)
Translates to: PEHSSHVTYPEV*VADPSQKPWPV
Trigger: GACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTCACGTGACTTGAGTGCTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR CCA 72 bp ACACAGTTACACGTGGCCCACCAGGAAAGAACTGGCTaGAGTCCTAGTTCCTGCCTGGTGGCCACTACATTC +
Preference number: 3 (lower is better)
Translates to: TQLHVAHQERTG*SPSSCLVATTF
Trigger: GAATGTAGTGGCCACCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR CCA 72 bp AGTGAAATGTCTCGCCCAAGGCCACACAGTTACACGTaGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTT +
Preference number: 3 (lower is better)
Translates to: SEMSRPRPHSYT*PTRKELAGVLV
Trigger: AACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR CCA 72 bp AAAATCACACACTTTGAGAAGCGCTTCCCCACTCCCTaGTCTCACTGGATTCCCAGCATCAAGGGAGTGGCT +
Preference number: 3 (lower is better)
Translates to: KITHFEKRFPTP*SHWIPSIKGVA
Trigger: AGCCACTCCCTTGATGCTGGGAATCCAGTGAGACCAGGGAGTGGGGAAGCGCTTCTCAAAGTGTGTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR TCA 72 bp TGCCGCTTGAGTTCATCCCTTCCTCTGTGGAGGAAATaGCCACCGTGGAAGTTATCTGTTGGTCTTCACGAC +
Preference number: 3 (lower is better)
Translates to: CRLSSSLPLWRK*PPWKLSVGLHD
Trigger: GTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTCCTCCACAGAGGAAGGGATGAACTCAAGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
3UTR TCA 72 bp GTGACAGGTCACCGAGTGCACAAACCCACAGATACCTaGACACACCGTGGCTTTATTATTAACGGATGCCAA +
Preference number: 3 (lower is better)
Translates to: VTGHRVHKPTDT*THRGFIINGCQ
Trigger: TTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGGGTTTGTGCACTCGGTGACCTGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR TCA 72 bp ATCTCCAGTTTACTGATAAACTCAGGCACAGAAAAGTaGAATGTCTCGCCCAAGGCCACACAGTTACACGTG +
Preference number: 3 (lower is better)
Translates to: ISSLLINSGTEK*NVSPKATQLHV
Trigger: CACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACTTTTCTGTGCCTGAGTTTATCAGTAAACTGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCTGCCCCTCGTCGGCCTaGGCGTCGCCCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRCPSSA*ASPPKL
Trigger: CAGCTTCGGGGGCGACGCCCAGGCCGACGAGGGGCA...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCTGCGATTTGCGGGCCTaGCCCTCGTCGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRCDLRA*PSSAWA
Trigger: CGCCCAGGCCGACGAGGGGCAGGCCCGCAAATCGCA...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCCCAGCTGCCGCACAGTaGTGGGGATGCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRPAAAQ*WGCWSG
Trigger: GCCGCTCCAGCATCCCCATCACTGTGCGGCAGCTGG...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp GCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGACCAGCTGCCGCACAGTaGTGGGGATGCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: AAGGARRGRVHESSEAARPAAAQ*WGCWSG
Trigger: GCCGCTCCAGCATCCCCATCACTGTGCGGCAGCTGG...TCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCCTGGGCATCTCCCCGTaGGGGACTGCATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRLGISP*GTASGS
Trigger: GCTGCCTGATGCAGTCCCCCACGGGGAGATGCCCAG...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCTGGCAAAGCGGCGCTTaGGCTGCTTCTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRWQSGA*AASRCG
Trigger: GCCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCA...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGACGGCCCCAGCAAAGCTaGGGCCAGAGCCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: AAGGARRGRVHESSEAARRPQQS*GQSHLC
Trigger: ACACAGATGGCTCTGGCCGCAGCTTTGCTGGGGCCG...TCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGCAGCTTCATCTTGCTaGGGGCTTCCGCGATGCGCA +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRAASSC*GLPRCA
Trigger: TGCGCATCGCGGAAGCCCTCAGCAAGATGAAGCTGC...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGAGGCGGTAGAGAACCTTaGGCTGCATGCGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: AAGGARRGRVHESSEAARGGREP*AACDAG
Trigger: TCCAGCATCGCATGCAGCGCAAGGTTCTCTACCGCC...TCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCAGCTGCAGCACCTTGTaGATGGCGTGCTCCGGGTAT +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRSCSTL*MACSGY
Trigger: ATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCT...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGCGCTGCATGCGATGCTaGATCTCGCCGCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGARCMRC*ISPRRS
Trigger: GCTGCGGCGCGGCGAGATCCAGCATCGCATGCAGCG...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGACAGCAACATTGTCAATaGCAGGCAGCGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AAGGARRGRVHESSEAARQQHCQ*QAAAGG
Trigger: CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTG...TCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCAGAAAGGAGGGTGCCTaGGAAGTTCGAGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRRKEGA*EVRGLQ
Trigger: CTGCAGCCCTCGAACTTCCCAGGCACCCTCCTTTCT...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCACTGTCCCTCTCGTGCTaGCGGGCCCCGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAALSLSC*RAPLRM
Trigger: CATGCGGAGCGGGGCCCGTCAGCACGAGAGGGACAG...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCCGCCGCGCCGCAGCATaGGCTGCAGCACCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGRRAAA*AAAPCG
Trigger: TCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCG...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGTGCGATTTGCGGGCCTaGCCCTCGTCGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LQWGGRGPSNIVNGRQRQCDLRA*PSSAWA
Trigger: CGCCCAGGCCGACGAGGGGCAGGCCCGCAAATCGCA...CTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTAGCCCGTGCGGTCGGTaGCCACTCGGTACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRSPCGR*PLGTAA
Trigger: TGCGGCAGTACCGAGTGGGCACCGACCGCACGGGCT...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGGCTTCCTCCAGCAGCTaGAGGTGCTCGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGAASSSS*RCSAGC
Trigger: GCAGCCAGCCGAGCACCTGCAGCTGCTGGAGGAAGC...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGACAGCCTGATCTGTGTTaGACTTCCTGGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: AAGGARRGRVHESSEAARQPDLC*TSWAGH
Trigger: ATGCCCTGCCCAGGAAGTGCAACACAGATCAGGCTG...TCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCTCTGTGGCGAAGGGCTaGAGCTTCATCTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRSVAKG*SFILLR
Trigger: CCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGA...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCCTGCAGGTGCTCGGCTaGCTGCTTGTACAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRLQVLG*LLVQVV
Trigger: GACTACTTGTACAAGCAGCCAGCCGAGCACCTGCAG...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGCGGCAGCTGCGGCACTaGATAGAGATGCGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGARQLRH*IEMRVA
Trigger: GGCCACCCGCATCTCTATCCAGTGCCGCAGCTGCCG...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGAAGGCAGCATCCAACGTaGACACTTGGAAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: AAGGARRGRVHESSEAARRQHPT*TLGRAA
Trigger: TGCGGCTCTTCCAAGTGTCCACGTTGGATGCTGCCT...TCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGTCCTAGTTCCTGCCTaGTGGCCACTACATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRVLVPA*WPLHSP
Trigger: AGGGGAATGTAGTGGCCACCAGGCAGGAACTAGGAC...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTGCCGCAGGAACTCCTTaGAGCGCCTCTGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRAAGTP*SASAAA
Trigger: CGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGC...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGCCAGCGGCCGAACACTaGGTTGGCAGCAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGPAAEH*VGSSQD
Trigger: GTCCTGGCTGCTGCCAACTCAGTGTTCGGCCGCTGG...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTTCTGCAGCTGCGATTTaGGGGCCTGCCCCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRSAAAI*GPAPRR
Trigger: CCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGA...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGTTGCGCTGCATGCGATaGTGGATCTCGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGLRCMR*WISPRR
Trigger: GCGGCGCGGCGAGATCCAGCATCGCATGCAGCGCAA...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCCGGCAGCTGCGGCACTaGATAGAGATGCGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGRQLRH*IEMRVA
Trigger: GGCCACCCGCATCTCTATCCAGTGCCGCAGCTGCCG...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCGTTCGAGGGCTGCAGTaGGGAGGCAGAGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGVRGLQ*GGRGPS
Trigger: GCTGGGACCTCTGCCTCCCCACTGCAGCCCTCGAAC...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCGCCGCAGGAACTCCTTaGAGCGCCTCTGCAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LASLPPDPVPSHLPCHEGAAGTP*SASAAA
Trigger: CGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGC...GCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp GCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGAACAAGATGGTGGGCATaGAGTCAATGTTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: AAGGARRGRVHESSEAARTRWWA*SQCCPP
Trigger: GGGAGGACAACATTGACTTCATGCCCACCATCTTGT...TCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTGCGGCGCGACTCACTTaGGGCGGTAGAGAACCTTGC +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRAARLT*GGREPC
Trigger: GCAAGGTTCTCTACCGCCTCAAGTGAGTCGCGCCGC...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCACTCCCCGTGGGGGACTaGATCAGGCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAALPVGD*IRQLLQ
Trigger: CTGCAGGAGCTGCCTGATGCAGTCCCCCACGGGGAG...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGCCGCAGCATGAGCTaGAGCACCTTGTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARRRSMS*STLWMA
Trigger: CGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCG...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGGGAAGTTCGAGGGCTaGAGTGGGGAGGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGGKFEG*SGEAEV
Trigger: GACCTCTGCCTCCCCACTGCAGCCCTCGAACTTCCC...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGGGTCCAATGGGCATTTaGGGCGCCCAGCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGAGPMGI*GAQPDL
Trigger: CAGATCAGGCTGGGCGCCCCAAATGCCCATTGGACC...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCATGGCAAAGCGGCGCTTaGGCTGCTTCTCGATGCGGC +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAAWQSGA*AASRCG
Trigger: GCCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCA...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGTCCTTGAAGCGCCTCTaGAGCTGCGATTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARSLKRL*SCDLRA
Trigger: GGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGA...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGGTGCCCACTCGGTACTaGCGCAGGAACTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGAVPTRY*RRNSLK
Trigger: CTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCAC...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGTCCAGCAGCTGCAGGTaGTCGGCTGGCTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARSSSCR*SAGCLY
Trigger: GTACAAGCAGCCAGCCGAGCACCTGCAGCTGCTGGA...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCTGTAGGAGCTTCGGATaGCCACGCCCACCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGCRSFG*PRPPCH
Trigger: GTGACAGGGTGGGCGTGGGCATCCGAAGCTCCTACA...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTGGGCAGAAAGGAGGGTaGCTGGGAAGTTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRGQKGG*LGSSRA
Trigger: AGCCCTCGAACTTCCCAGGCACCCTCCTTTCTGCCC...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCTCCGACAGCTGCAGGTaGTCGGCTGGCTGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGSDSCR*SAGCLY
Trigger: GTACAAGCAGCCAGCCGAGCACCTGCAGCTGTCGGA...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382011.9
CDS-3UTR GCA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGATCATGTCCGACAGCTaGAGGTGCTCGGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGIMSDS*RCSAGC
Trigger: GCAGCCAGCCGAGCACCTGCAGCTGTCGGACATGAT...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382011.9
CDS-3UTR CCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGGACCTCATAGACATTTaGGAGGGCAGCCAGGCGACG +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGADLIDI*EGSQAT
Trigger: CGTCGCCTGGCTGCCCTCCCAAATGTCTATGAGGTC...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCTGTGCCCCCAAAGATaGAGGGGGCGATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARLCPQR*RGRCSW
Trigger: CCAAGAGCATCGCCCCCTCCATCTTTGGGGGCACAG...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGCCACATCTGCCTCTGTaGCGAAGGGCTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGAPHLPL*RRAAAS
Trigger: TGAAGCTGCAGCCCTTCGCCACAGAGGCAGATGTGG...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCCGGCTCAGCATCTCCTaGTCCTCCTGGCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGRLSIS*SSWLVK
Trigger: CTTCACCAGCCAGGAGGACCAGGAGATGCTGAGCCG...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCGCATGGCAATGTTGGTaGGGGTGTTGCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LASLPPDPVPSHLPCHEGAWQCW*GCCGSC
Trigger: GCAGCTGCCGCAACACCCTCACCAACATTGCCATGC...GCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp CTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGCATGGCAATGTTGGTaGGGGTGTTGCGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LQWGGRGPSNIVNGRQRQAWQCW*GCCGSC
Trigger: GCAGCTGCCGCAACACCCTCACCAACATTGCCATGC...CTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp TTACCCTGCCATGAGGGCACGATGGAGGTGACAGGTCACCGAGTGCACAAACCCAAGCGCCTCTGCAGCTaGGATTTGCGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPCHEGTMEVTGHRVHKPKRLCS*DLRACP
Trigger: GGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTT...GGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp TTACCCTGCCATGAGGGCACGATGGAGGTGACAGGTCACCGAGTGCACAAACCCTTGCGCTGCATGCGATaGTGGATCTCGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: LPCHEGTMEVTGHRVHKPLRCMR*WISPRR
Trigger: GCGGCGCGGCGAGATCCAGCATCGCATGCAGCGCAA...GGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGTCCAATGGGCATTTaGGGCGCCCAGCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAAGPMGI*GAQPDL
Trigger: CAGATCAGGCTGGGCGCCCCAAATGCCCATTGGACC...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTAGCTGCAGCACCTTGTaGATGGCGTGCTCCGGGTAT +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRSCSTL*MACSGY
Trigger: ATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCT...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CACAGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCCGCTGCATGCGATGCTaGATCTCGCCGCGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: HSYTWPTRKELAGVLVPARCMRC*ISPRRS
Trigger: GCTGCGGCGCGGCGAGATCCAGCATCGCATGCAGCG...GGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGGATCTTCACCAGGTGTaGCATCATGTCCGACAGCTG +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGADLHQV*HHVRQL
Trigger: CAGCTGTCGGACATGATGTCACACCTGGTGAAGATC...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382011.9
CDS-3UTR GCA 90 bp CTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCACTTCAGGCTACGAATaGTGGAAGGGCTGGCGTCCG +
Preference number: 4 (lower is better)
Translates to: LASLPPDPVPSHLPCHEGTSGYE*WKGWRP
Trigger: CGGACGCCAGCCCTTCCAGCATTCGTAGCCTGAAGT...GCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTCAGCCTGATCTGTGTTaGACTTCCTGGGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRQPDLC*TSWAGH
Trigger: ATGCCCTGCCCAGGAAGTGCAACACAGATCAGGCTG...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGCATCAGGCAGCTCCTaGAGCTTCAGGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAAASGSS*SFRVWK
Trigger: CTTCCAGACCCTGAAGCTGCAGGAGCTGCCTGATGC...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTCCTTCTTCATGTCTGTaGCCCCAAAGATGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRPSSCL*PQRWRG
Trigger: CCCCCTCCATCTTTGGGGGCACAGACATGAAGAAGG...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTGTCCAGCTGCGCTGCTaGCTTTCCCAGACGTGTATA +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRVQLRC*LSQTCI
Trigger: TATACACGTCTGGGAAAGGCAGCAGCGCAGCTGGAC...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGCGGTAGAGAACCTTaGGCTGCATGCGATGCTGGA +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAAGGREP*AACDAG
Trigger: TCCAGCATCGCATGCAGCGCAAGGTTCTCTACCGCC...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCACGATGGAGGTGGGGCAGAAAGGAGGGTaGCTGGGAAGTTCGAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPDPVPSHLPCHEGTMEVGQKGG*LGSSRA
Trigger: AGCCCTCGAACTTCCCAGGCACCCTCCTTTCTGCCC...CACCTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp AATCCAGTACTCCCCCAGGTTGTAATGCCGCTTGAGTTCATCCCTTCCTCTGTGTGCCCCTCGTCGGCCTaGGCGTCGCCCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: NPVLPQVVMPLEFIPSSVCPSSA*ASPPKL
Trigger: CAGCTTCGGGGGCGACGCCCAGGCCGACGAGGGGCA...CACAGAGGAAGGGATGAACTCAAGCGGCATTACAACCTGGGGGAGTACTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR CCA 90 bp CTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGCCATCTGTGTCCACCTaGATGCCCAGGACACGGATG +
Preference number: 4 (lower is better)
Translates to: LQWGGRGPSNIVNGRQRQPSVST*MPRTRM
Trigger: CATCCGTGTCCTGGGCATCCAGGTGGACACAGATGG...CTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCGCGATGCGCACAATaGCCTCCAGCTGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: LSGRSKSETLASLPPDPVPRCAQ*PPAAAQ
Trigger: CTGTGCGGCAGCTGGAGGCCATTGTGCGCATCGCGG...AACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp CCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCACGATGGAGGTGTCCAACGTGGACACTTaGAAGAGCCGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPDPVPSHLPCHEGTMEVSNVDT*KSRRAS
Trigger: GGAGGCCCTGCGGCTCTTCCAAGTGTCCACGTTGGA...CACCTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp CTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCCTGTGCTCAGACACCTaGGAGCCAATGGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: LASLPPDPVPSHLPCHEGLCSDT*EPMAKR
Trigger: CCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCACAG...GCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GACTTACCCAGAAGTCTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGAGCCCGTGCGGTCGGTaGCCACTCGGTACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: DLPRSLSGRSKSETLASLSPCGR*PLGTAA
Trigger: TGCGGCAGTACCGAGTGGGCACCGACCGCACGGGCT...CAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGTGCAGAGTGATGACATaGTTGGCCAGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGACRVMT*LASITS
Trigger: GGATGTGATGCTGGCCAAGCATGTCATCACTCTGCA...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGTCAGTGCGCTCACGTaGAGAGTGATGACATGCTTG +
Preference number: 4 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGVSALT*RVMTCL
Trigger: CAAGCATGTCATCACTCTGCACGTGAGCGCACTGAC...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCATCTGTGGCGAAGGGCTaGAGCTTCATCTTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAASVAKG*SFILLR
Trigger: CCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGA...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp AGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCAGAACCTTGCGCTGCATaGGATGCTGGATCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: RNPGQSASRPCSLTLTLPEPCAA*DAGSRR
Trigger: GCGGCGAGATCCAGCATCGCATGCAGCGCAAGGTTC...TGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGGGTCCTCATCAAAGCTaGCCAGATCCTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARGPHQS*PDPPSP
Trigger: TGGAGATGGAGGATCTGGCCAGCTTTGATGAGGACC...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCGACTTGAGCATGACCTaGATGTCCTGGAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: LASLPPDPVPSHLPCHEGDLSMT*MSWSTS
Trigger: GGAGGTGCTCCAGGACATCCAGGTCATGCTCAAGTC...GCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGCAGCACCTTGTGGATaGCGTGCTCCGGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAAAAPCG*RAPGIS
Trigger: AGAAATACCCGGAGCACGCCATCCACAAGGTGCTGC...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTTGTCGCTGTAGAAAATaGCAGGATCGTCGAATCCCG +
Preference number: 4 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRCRCRK*QDRRIP
Trigger: CGGGATTCGACGATCCTGGCATTTTCTACAGCGACA...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp AGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCTGGTCCTTGAAGCGCCTCTaGAGCTGCGATTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: SYTWPTRKELAGVLVPAWSLKRL*SCDLRA
Trigger: GGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGA...CCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp TGTCTCGCCCAAGGCCACACAGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGTGCCCACTCGGTACTaGCGCAGGAACTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: CLAQGHTVTRGPPGKNWLVPTRY*RRNSLK
Trigger: CTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCAC...CAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp CTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTTGTAGGAGCTTCGGATaGCCACGCCCACCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LSGRSKSETLASLPPDPVCRSFG*PRPPCH
Trigger: GTGACAGGGTGGGCGTGGGCATCCGAAGCTCCTACA...AACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp CAGGTGAGGCGGATCAAAATCACACACTTTGAGAAGCGCTTCCCCACTCCCTGGCGGCCCCAGCAAAGCTaGGGCCAGAGCCATCTGTGT +
Preference number: 4 (lower is better)
Translates to: QVRRIKITHFEKRFPTPWRPQQS*GQSHLC
Trigger: ACACAGATGGCTCTGGCCGCAGCTTTGCTGGGGCCG...CCAGGGAGTGGGGAAGCGCTTCTCAAAGTGTGTGATTTTGATCCGCCTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCATCCTTGATGATGCTGTaGTCAGACACCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAASLMML*SDTWEP
Trigger: TGGCTCCCAGGTGTCTGAGCACAGCATCATCAAGGA...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGTGCCCCTCGTCGGCCTaGGCGTCGCCCCCGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VALLLTDAKSTLPRTALECPSSA*ASPPKL
Trigger: CAGCTTCGGGGGCGACGCCCAGGCCGACGAGGGGCA...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGTGCAGCTTCAGGGTCTaGAAGTCCACGCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARCSFRV*KSTHLH
Trigger: ATGCAAATGCGTGGACTTCCAGACCCTGAAGCTGCA...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GACTTACCCAGAAGTCTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCTGGGCATCTCCCCGTaGGGGACTGCATCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DLPRSLSGRSKSETLASLLGISP*GTASGS
Trigger: GCTGCCTGATGCAGTCCCCCACGGGGAGATGCCCAG...CAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp AGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCTGGAGAGCTGCATGTGTCTaGGCATCTCCCCGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SYTWPTRKELAGVLVPAWRAACV*ASPRGG
Trigger: TCCCCCACGGGGAGATGCCCAGACACATGCAGCTCT...CCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp TTACCCTGCCATGAGGGCACGATGGAGGTGACAGGTCACCGAGTGCACAAACCCTCAGAAGCTGGGACTTaGCTGTCCCAGGGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: LPCHEGTMEVTGHRVHKPSEAGT*LSQGPL
Trigger: TAGGGGACCCTGGGACAGCCAAGTCCCAGCTTCTGA...GGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp AGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCACCACATCTGCCTCTGTaGCGAAGGGCTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RNPGQSASRPCSLTLTLPPHLPL*RRAAAS
Trigger: TGAAGCTGCAGCCCTTCGCCACAGAGGCAGATGTGG...TGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGATGCTCTTGGAGATaGCCTCATAGACATTTGGGA +
Preference number: 4 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARRCSWR*PHRHLG
Trigger: TCCCAAATGTCTATGAGGTCATCTCCAAGAGCATCG...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp AAAAGTGAAATGTCTCGCCCAAGGCCACACAGTTACACGTGGCCCACCAGGAAACCAGCGGCCGAACACTaGGTTGGCAGCAGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KSEMSRPRPHSYTWPTRKPAAEH*VGSSQD
Trigger: GTCCTGGCTGCTGCCAACTCAGTGTTCGGCCGCTGG...TTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp CAGGTGAGGCGGATCAAAATCACACACTTTGAGAAGCGCTTCCCCACTCCCTGGAGGGCACGATGGAGGTaGCAGGTCACCGAGTGCACA +
Preference number: 4 (lower is better)
Translates to: QVRRIKITHFEKRFPTPWRARWR*QVTECT
Trigger: TGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCT...CCAGGGAGTGGGGAAGCGCTTCTCAAAGTGTGTGATTTTGATCCGCCTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp AGAAGCACGTCTTTTCATCTTTGTAGCGCAGTGCCTGGCACACAGGTGGGCAATTCTGCAGCTGCGATTTaGGGGCCTGCCCCTCGTCGG +
Preference number: 4 (lower is better)
Translates to: RSTSFHLCSAVPGTQVGNSAAAI*GPAPRR
Trigger: CCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGA...ATTGCCCACCTGTGTGCCAGGCACTGCGCTACAAAGATGAAAAGACGTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR GCA 90 bp TGTGGAGGAAATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCCAGCCCGTGCGGTCGGTaGCCACTCGGTACTGCCGCA +
Preference number: 4 (lower is better)
Translates to: CGGNDHRGSYLLVFTTHSSPCGR*PLGTAA
Trigger: TGCGGCAGTACCGAGTGGGCACCGACCGCACGGGCT...GGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTCCTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR GCA 90 bp AAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCAGCATCACTGTCACTAGTCTCCCCGTGGGGGACTaGATCAGGCAGCTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KVTEALGNTPSSSITVTSLPVGD*IRQLLQ
Trigger: CTGCAGGAGCTGCCTGATGCAGTCCCCCACGGGGAG...ACTAGTGACAGTGATGCTGGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp CTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCTGCAGAGTGATGACATaGTTGGCCAGCATCACATCC +
Preference number: 4 (lower is better)
Translates to: LASLPPDPVPSHLPCHEGCRVMT*LASITS
Trigger: GGATGTGATGCTGGCCAAGCATGTCATCACTCTGCA...GCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCCTGTGCCCCCAAAGATaGAGGGGGCGATGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: IINGCQKHTSQNRARGGRLCPQR*RGRCSW
Trigger: CCAAGAGCATCGCCCCCTCCATCTTTGGGGGCACAG...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp AGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCAGCAGCACCTTGTGGATaGCGTGCTCCGGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: RNPGQSASRPCSLTLTLPAAPCG*RAPGIS
Trigger: AGAAATACCCGGAGCACGCCATCCACAAGGTGCTGC...TGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp AAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCAGCATCACTGTCACTAGTGTTCGAGGGCTGCAGTaGGGAGGCAGAGGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KVTEALGNTPSSSITVTSVRGLQ*GGRGPS
Trigger: GCTGGGACCTCTGCCTCCCCACTGCAGCCCTCGAAC...ACTAGTGACAGTGATGCTGGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGGGTCCTCCTGGCTGGTaGAGCCCTCCACCCCTGACA +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGGPPGW*SPPPLT
Trigger: TGTCAGGGGTGGAGGGCTTCACCAGCCAGGAGGACC...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp TTACCCTGCCATGAGGGCACGATGGAGGTGACAGGTCACCGAGTGCACAAACCCGCCCCGCTAAACAGATaGAGAAACCGGAGCACTCAA +
Preference number: 4 (lower is better)
Translates to: LPCHEGTMEVTGHRVHKPAPLNR*RNRSTQ
Trigger: TTGAGTGCTCCGGTTTCTTCATCTGTTTAGCGGGGC...GGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGAAGCGCCTCTGCAGCTaGGATTTGCGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGKRLCS*DLRACP
Trigger: GGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTT...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp TGTGGAGGAAATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCCAAGCGCCTCTGCAGCTaGGATTTGCGGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: CGGNDHRGSYLLVFTTHSKRLCS*DLRACP
Trigger: GGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTT...GGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR GCA 90 bp CAGGTGAGGCGGATCAAAATCACACACTTTGAGAAGCGCTTCCCCACTCCCTGGGCATCAGGCAGCTCCTaGAGCTTCAGGGTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QVRRIKITHFEKRFPTPWASGSS*SFRVWK
Trigger: CTTCCAGACCCTGAAGCTGCAGGAGCTGCCTGATGC...CCAGGGAGTGGGGAAGCGCTTCTCAAAGTGTGTGATTTTGATCCGCCTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GACTTACCCAGAAGTCTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGAAGCGGCGCTTGAGCTaGTTCTCGATGCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DLPRSLSGRSKSETLASLKRRLS*FSMRLS
Trigger: GCTGAGCCGCATCGAGAAGCAGCTCAAGCGCCGCTT...CAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp CAGGTGAGGCGGATCAAAATCACACACTTTGAGAAGCGCTTCCCCACTCCCTGGCTGTGTTGCACTTCCTaGGCAGGGCATAGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: QVRRIKITHFEKRFPTPWLCCTS*AGHSPR
Trigger: TCGAGGGCTATGCCCTGCCCAGGAAGTGCAACACAG...CCAGGGAGTGGGGAAGCGCTTCTCAAAGTGTGTGATTTTGATCCGCCTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGACGTGTATACCCCAATaGGAGAACACTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGTCIPQ*ENTSPQ
Trigger: TTGTGGAGAAGTGTTCTCCCATTGGGGTATACACGT...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCAGAAAGGAGGGTGCCTaGGAAGTTCGAGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IINGCQKHTSQNRARGGRRKEGA*EVRGLQ
Trigger: CTGCAGCCCTCGAACTTCCCAGGCACCCTCCTTTCT...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCTACAGCTCCTTCCTCTaGGGCAGAAAGGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: IINGCQKHTSQNRARGGRYSSFL*GRKEGA
Trigger: GGCACCCTCCTTTCTGCCCCAGAGGAAGGAGCTGTA...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCACCCAGAAGTCTGAGTaGCAGATCCAAGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LASLPPDPVPSHLPCHEGTQKSE*QIQVRN
Trigger: GTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGT...GCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp CACAACCCTGTGAAGCAGGTTCTAGTATCAGCCTGCTTACAGATAAGGAAACTACTGTCCCTCTCGTGCTaGCGGGCCCCGCTCCGCATG +
Preference number: 4 (lower is better)
Translates to: HNPVKQVLVSACLQIRKLLSLSC*RAPLRM
Trigger: CATGCGGAGCGGGGCCCGTCAGCACGAGAGGGACAG...TAGTTTCCTTATCTGTAAGCAGGCTGATACTAGAACCTGCTTCACAGGGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp GACTTTCTGAAATTAGGCAAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCGCGGCGCGACTCACTTaGGGCGGTAGAGAACCTTGC +
Preference number: 4 (lower is better)
Translates to: DFLKLGKVTEALGNTPSSAARLT*GGREPC
Trigger: GCAAGGTTCTCTACCGCCTCAAGTGAGTCGCGCCGC...GGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTTGCCTAATTTCAGAAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp AGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGTCGCTGTAGAAAATaGCAGGATCGTCGAATCCCG +
Preference number: 4 (lower is better)
Translates to: RNPGQSASRPCSLTLTLPCRCRK*QDRRIP
Trigger: CGGGATTCGACGATCCTGGCATTTTCTACAGCGACA...TGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGGGGAAGTTCGAGGGCTaGAGTGGGGAGGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGGKFEG*SGEAEV
Trigger: GACCTCTGCCTCCCCACTGCAGCCCTCGAACTTCCC...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GACTTACCCAGAAGTCTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCCCTCACACTTACCCTaGCATGAGGGCACGATGGAG +
Preference number: 4 (lower is better)
Translates to: DLPRSLSGRSKSETLASLPSHLP*HEGTME
Trigger: CTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGGG...CAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp GACTTACCCAGAAGTCTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGTCAGGCTACGAATGCTaGAAGGGCTGGCGTCCGACT +
Preference number: 4 (lower is better)
Translates to: DLPRSLSGRSKSETLASLSGYEC*KGWRPT
Trigger: AGTCGGACGCCAGCCCTTCCAGCATTCGTAGCCTGA...CAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCAGATGCGGGTGGCCTTaGCACGGACCGCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTRCGWP*HGPQRP
Trigger: CGGCCTCTGCGGTCCGTGCCAAGGCCACCCGCATCT...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGCCGCGATGCGCACAATaGCCTCCAGCTGCCGCACAG +
Preference number: 4 (lower is better)
Translates to: VALLLTDAKSTLPRTALEPRCAQ*PPAAAQ
Trigger: CTGTGCGGCAGCTGGAGGCCATTGTGCGCATCGCGG...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CACAGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCGATCTTCACCAGGTGTaGCATCATGTCCGACTTCAG +
Preference number: 4 (lower is better)
Translates to: HSYTWPTRKELAGVLVPADLHQV*HHVRLQ
Trigger: CTGAAGTCGGACATGATGTCACACCTGGTGAAGATC...GGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGGTCCTCCTGGCTGGTaGAGCCCTCCACCCCTGACA +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTGPPGW*SPPPLT
Trigger: TGTCAGGGGTGGAGGGCTTCACCAGCCAGGAGGACC...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CTCAATCCAGTACTCCCCCAGGTTGTAATGCCGCTTGAGTTCATCCCTTCCTCTGTGCCCACTCGGTACTaGCGCAGGAACTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: LNPVLPQVVMPLEFIPSSVPTRY*RRNSLK
Trigger: CTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCAC...AGAGGAAGGGATGAACTCAAGCGGCATTACAACCTGGGGGAGTACTGGATTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR GCA 90 bp GACTTACCCAGAAGTCTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCCTTCTTCATGTCTGTaGCCCCAAAGATGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: DLPRSLSGRSKSETLASLPSSCL*PQRWRG
Trigger: CCCCCTCCATCTTTGGGGGCACAGACATGAAGAAGG...CAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp CAGGTGAGGCGGATCAAAATCACACACTTTGAGAAGCGCTTCCCCACTCCCTGGGGTCCTCATCAAAGCTaGCCAGATCCTCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: QVRRIKITHFEKRFPTPWGPHQS*PDPPSP
Trigger: TGGAGATGGAGGATCTGGCCAGCTTTGATGAGGACC...CCAGGGAGTGGGGAAGCGCTTCTCAAAGTGTGTGATTTTGATCCGCCTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp GACTTTCTGAAATTAGGCAAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCGAAGTACGGGTCCAATaGGCATTTGGGGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: DFLKLGKVTEALGNTPSSEVRVQ*AFGAPS
Trigger: GCTGGGCGCCCCAAATGCCCATTGGACCCGTACTTC...GGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTTGCCTAATTTCAGAAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGGAAGTACGGGTCCAATaGGCATTTGGGGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGEVRVQ*AFGAPS
Trigger: GCTGGGCGCCCCAAATGCCCATTGGACCCGTACTTC...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp AAAAGTGAAATGTCTCGCCCAAGGCCACACAGTTACACGTGGCCCACCAGGAAACCATCTGTGTCCACCTaGATGCCCAGGACACGGATG +
Preference number: 4 (lower is better)
Translates to: KSEMSRPRPHSYTWPTRKPSVST*MPRTRM
Trigger: CATCCGTGTCCTGGGCATCCAGGTGGACACAGATGG...TTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp GTCACTAGTGCCTTCTGTCATTCAATCCTCACAACTCAGGGTGAGGAATCCCCCGACCTCATAGACATTTaGGAGGGCAGCCAGGCGACG +
Preference number: 4 (lower is better)
Translates to: VTSAFCHSILTTQGEESPDLIDI*EGSQAT
Trigger: CGTCGCCTGGCTGCCCTCCCAAATGTCTATGAGGTC...GGGGGATTCCTCACCCTGAGTTGTGAGGATTGAATGACAGAAGGCACTAGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp GACTTTCTGAAATTAGGCAAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCCGTCGAATCCCGACATaGCTGCGCCTCTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: DFLKLGKVTEALGNTPSSRRIPT*LRLWFS
Trigger: GGAAAACCAGAGGCGCAGTCATGTCGGGATTCGACG...GGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTTGCCTAATTTCAGAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGTCGAATCCCGACATaGCTGCGCCTCTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGRRIPT*LRLWFS
Trigger: GGAAAACCAGAGGCGCAGTCATGTCGGGATTCGACG...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGCATACCAACTCAGAGTaGCTTTCTGAAATTAGGCAA +
Preference number: 4 (lower is better)
Translates to: LQWGGRGPSNIVNGRQRQHTNSE*LSEIRQ
Trigger: TTGCCTAATTTCAGAAAGTCACTCTGAGTTGGTATG...CTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCTGTGTCCACCTGGATaGCCAGGACACGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGLCPPG*PGHGCR
Trigger: CCTACATCCGTGTCCTGGGCATCCAGGTGGACACAG...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGAAGCGGCGCTTGAGCTaGTTCTCGATGCGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VALLLTDAKSTLPRTALEKRRLS*FSMRLS
Trigger: GCTGAGCCGCATCGAGAAGCAGCTCAAGCGCCGCTT...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp CTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTTGCTCCGGGTATTTCTaGTTGGTGAAGTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LSGRSKSETLASLPPDPVCSGYF*LVKSLM
Trigger: CATCAAGGACTTCACCAAGCAGAAATACCCGGAGCA...AACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GACTTACCCAGAAGTCTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGACCTTGTGGATGGCGTaGTCCGGGTATTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: DLPRSLSGRSKSETLASLTLWMA*SGYFCL
Trigger: CAAGCAGAAATACCCGGAGCACGCCATCCACAAGGT...CAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCCGCCGCAGCATGAGCTaGAGCACCTTGTGGATGGCG +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTRRSMS*STLWMA
Trigger: CGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCG...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCTGCAGCTTCAGGGTCTaGAAGTCCACGCATTTGCAT +
Preference number: 4 (lower is better)
Translates to: IINGCQKHTSQNRARGGRCSFRV*KSTHLH
Trigger: ATGCAAATGCGTGGACTTCCAGACCCTGAAGCTGCA...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGAGAGCTGCATGTGTCTaGGCATCTCCCCGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VALLLTDAKSTLPRTALERAACV*ASPRGG
Trigger: TCCCCCACGGGGAGATGCCCAGACACATGCAGCTCT...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGTCCAACGTGGACACTTaGAAGAGCCGCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VALLLTDAKSTLPRTALESNVDT*KSRRAS
Trigger: GGAGGCCCTGCGGCTCTTCCAAGTGTCCACGTTGGA...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCAGCAACATTGTCAATaGCAGGCAGCGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGQQHCQ*QAAAGG
Trigger: CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTG...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp AGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCAAAGGAAACTAAGGCATaGAGAGGGTCCATGAATCCA +
Preference number: 4 (lower is better)
Translates to: RNPGQSASRPCSLTLTLPKETKA*RGSMNP
Trigger: TGGATTCATGGACCCTCTCCATGCCTTAGTTTCCTT...TGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp AAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCAGCATCACTGTCACTAGTCTAGTTCCTGCCTGGTaGCCACTACATTCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KVTEALGNTPSSSITVTSLVPAW*PLHSPH
Trigger: GTGAGGGGAATGTAGTGGCCACCAGGCAGGAACTAG...ACTAGTGACAGTGATGCTGGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp TCTGTGGAGGAAATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCGTCGAATCCCGACATaGCTGCGCCTCTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SVEEMTTVEVICWSSRLTRRIPT*LRLWFS
Trigger: GGAAAACCAGAGGCGCAGTCATGTCGGGATTCGACG...AGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTCCTCCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR TCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCAGCTTCATCTTGCTaGGGGCTTCCGCGATGCGCA +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTAASSC*GLPRCA
Trigger: TGCGCATCGCGGAAGCCCTCAGCAAGATGAAGCTGC...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp CTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTAAACCCACAGATACCTaGACACACCGTGGCTTTATT +
Preference number: 4 (lower is better)
Translates to: LSGRSKSETLASLPPDPVKPTDT*THRGFI
Trigger: AATAAAGCCACGGTGTGTTCAGGTATCTGTGGGTTT...AACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp AATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCCTCTGACTTATCCTTGAAGCGCCTCTaGAGCTGCGATTTGCGGGCC +
Preference number: 4 (lower is better)
Translates to: NDHRGSYLLVFTTHSSDLSLKRL*SCDLRA
Trigger: GGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGA...TAAGTCAGAGGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR GCA 90 bp AAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCAGCATCACTGTCACTAGTTCCTTGATGATGCTGTaGTCAGACACCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: KVTEALGNTPSSSITVTSSLMML*SDTWEP
Trigger: TGGCTCCCAGGTGTCTGAGCACAGCATCATCAAGGA...ACTAGTGACAGTGATGCTGGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGAACCTTGCGCTGCATaGGATGCTGGATCTCGCCGC +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTEPCAA*DAGSRR
Trigger: GCGGCGAGATCCAGCATCGCATGCAGCGCAAGGTTC...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCTGCAGGTGCTCGGCTaGCTGCTTGTACAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGLQVLG*LLVQVV
Trigger: GACTACTTGTACAAGCAGCCAGCCGAGCACCTGCAG...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGCTGTGCTCAGACACCTaGGAGCCAATGGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: VALLLTDAKSTLPRTALELCSDT*EPMAKR
Trigger: CCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCACAG...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR TCA 90 bp GTGGAGGAAATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCCTCACGACTCACTCCTCTaGCTTAGGAGCTTCTCTAGG +
Preference number: 4 (lower is better)
Translates to: VEEMTTVEVICWSSRLTPHDSLL*LRSFSR
Trigger: CCTAGAGAAGCTCCTAAGTCAGAGGAGTGAGTCGTG...AGGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTCCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR TCA 90 bp AGGACAAGAAGCACGTCTTTTCATCTTTGTAGCGCAGTGCCTGGCACACAGGTGGGTTGTAATGCCGCTTaGGTTCATCCCTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: RTRSTSFHLCSAVPGTQVGCNAA*VHPFLC
Trigger: ACAGAGGAAGGGATGAACTCAAGCGGCATTACAACC...CACCTGTGTGCCAGGCACTGCGCTACAAAGATGAAAAGACGTGCTTCTTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR GCA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGTCCAGCTGCGCTGCTaGCTTTCCCAGACGTGTATA +
Preference number: 4 (lower is better)
Translates to: VALLLTDAKSTLPRTALEVQLRC*LSQTCI
Trigger: TATACACGTCTGGGAAAGGCAGCAGCGCAGCTGGAC...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GACTTTCTGAAATTAGGCAAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCGTCAGTGCGCTCACGTaGAGAGTGATGACATGCTTG +
Preference number: 4 (lower is better)
Translates to: DFLKLGKVTEALGNTPSSVSALT*RVMTCL
Trigger: CAAGCATGTCATCACTCTGCACGTGAGCGCACTGAC...GGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTTGCCTAATTTCAGAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp CCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCACGATGGAGGTGGTTCTAGTATCAGCCTaGTTACAGATAAGGAAACTA +
Preference number: 4 (lower is better)
Translates to: PPDPVPSHLPCHEGTMEVVLVSA*LQIRKL
Trigger: TAGTTTCCTTATCTGTAAGCAGGCTGATACTAGAAC...CACCTCCATCGTGCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp GAAATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCCTCTGACTATCTTTGTAGCGCAGTaGCTGGCACACAGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: EMTTVEVICWSSRLTPLTIFVAQ*LAHRWA
Trigger: TGCCCACCTGTGTGCCAGGCACTGCGCTACAAAGAT...AGTCAGAGGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR CCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCCTGTGTTGCACTTCCTaGGCAGGGCATAGCCCTCGA +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTLCCTS*AGHSPR
Trigger: TCGAGGGCTATGCCCTGCCCAGGAAGTGCAACACAG...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCTCAGAAGCTGGGACTTaGCTGTCCCAGGGTCCCCTA +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTSEAGT*LSQGPL
Trigger: TAGGGGACCCTGGGACAGCCAAGTCCCAGCTTCTGA...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGACAAACTTCAGAAGCTaGGACTTGGCTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGTNFRS*DLAVPG
Trigger: CCCTGGGACAGCCAAGTCCCAGCTTCTGAAGTTTGT...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CCACAGATACCTGAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACGGCTCAGCATCTCCTaGTCCTCCTGGCTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: PQIPEHTVALLLTDAKSTRLSIS*SSWLVK
Trigger: CTTCACCAGCCAGGAGGACCAGGAGATGCTGAGCCG...TGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp CCACAGATACCTGAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACGCTTCCCCACTCCCTaGTCTCACTGGATTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PQIPEHTVALLLTDAKSTRFPTP*SHWIPS
Trigger: GCTGGGAATCCAGTGAGACCAGGGAGTGGGGAAGCG...TGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp AAAAGTGAAATGTCTCGCCCAAGGCCACACAGTTACACGTGGCCCACCAGGAAACGATGCTCTTGGAGATaGCCTCATAGACATTTGGGA +
Preference number: 4 (lower is better)
Translates to: KSEMSRPRPHSYTWPTRKRCSWR*PHRHLG
Trigger: TCCCAAATGTCTATGAGGTCATCTCCAAGAGCATCG...TTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp CACAACCCTGTGAAGCAGGTTCTAGTATCAGCCTGCTTACAGATAAGGAAACTACTGTGTCCACCTGGATaGCCAGGACACGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: HNPVKQVLVSACLQIRKLLCPPG*PGHGCR
Trigger: CCTACATCCGTGTCCTGGGCATCCAGGTGGACACAG...TAGTTTCCTTATCTGTAAGCAGGCTGATACTAGAACCTGCTTCACAGGGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR GCA 90 bp CACAACCCTGTGAAGCAGGTTCTAGTATCAGCCTGCTTACAGATAAGGAAACTAAAACCCTGGCCAGTCTaGCTCCAGACCCTGTTCCCT +
Preference number: 4 (lower is better)
Translates to: HNPVKQVLVSACLQIRKLKPWPV*LQTLFP
Trigger: AGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTT...TAGTTTCCTTATCTGTAAGCAGGCTGATACTAGAACCTGCTTCACAGGGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp CCACAGATACCTGAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACATACAGCTCCTTCCTCTaGGGCAGAAAGGAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: PQIPEHTVALLLTDAKSTYSSFL*GRKEGA
Trigger: GGCACCCTCCTTTCTGCCCCAGAGGAAGGAGCTGTA...TGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
3UTR CAA 72 bp CTCTGTGGAGGAAATGACCACCGTGGAAGTTATCTGTaGGTCTTCACGACTCACTCCTCTGACTTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LCGGNDHRGSYL*VFTTHSSDLGA
Trigger: AGCTCCTAAGTCAGAGGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTCCTCCACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR TCA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGACAAGATGGTGGGCATaGAGTCAATGTTGTCCTCCC +
Preference number: 4 (lower is better)
Translates to: VALLLTDAKSTLPRTALETRWWA*SQCCPP
Trigger: GGGAGGACAACATTGACTTCATGCCCACCATCTTGT...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGTCCCTCTCCTCATTGTaGTCATCCTTGACGATGAAG +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGSLSSL*SSLTMK
Trigger: CTTCATCGTCAAGGATGAGCACAATGAGGAGAGGGA...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGTGCTCCGGGTATTTCTaGTTGGTGAAGTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGCSGYF*LVKSLM
Trigger: CATCAAGGACTTCACCAAGCAGAAATACCCGGAGCA...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCACCTTGTGGATGGCGTaGTCCGGGTATTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTTLWMA*SGYFCL
Trigger: CAAGCAGAAATACCCGGAGCACGCCATCCACAAGGT...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CCACAGATACCTGAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACATCAGCTACCTCCTTaGCAGCTTCCTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PQIPEHTVALLLTDAKSTHQLPP*QLPPAA
Trigger: AGCTGCTGGAGGAAGCTGCCAAGGAGGTAGCTGATG...TGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCACAAACTTCAGAAGCTaGGACTTGGCTGTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTTNFRS*DLAVPG
Trigger: CCCTGGGACAGCCAAGTCCCAGCTTCTGAAGTTTGT...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCTGCTCCATGGCTTCGTaGATTGCCACACGGTCATCT +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTCSMAS*IATRSS
Trigger: AGATGACCGTGTGGCAATCCACGAAGCCATGGAGCA...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CCA 90 bp CACAACCCTGTGAAGCAGGTTCTAGTATCAGCCTGCTTACAGATAAGGAAACTAAGGCAGCATCCAACGTaGACACTTGGAAGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: HNPVKQVLVSACLQIRKLRQHPT*TLGRAA
Trigger: TGCGGCTCTTCCAAGTGTCCACGTTGGATGCTGCCT...TAGTTTCCTTATCTGTAAGCAGGCTGATACTAGAACCTGCTTCACAGGGTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CCA 90 bp AATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCCTCTGACTTATGCCTGGCACACAGGTaGGCAATATCAGCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: NDHRGSYLLVFTTHSSDLCLAHR*AISAAV
Trigger: TACAGCAGCTGATATTGCCCACCTGTGTGCCAGGCA...TAAGTCAGAGGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR TCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCTTACTGGGGAACAGGTaGGGCGGATCAAAATCACAC +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTLLGNR*GGSKSH
Trigger: GTGTGATTTTGATCCGCCTCACCTGTTCCCCAGTAA...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR TCA 90 bp TTAGGAGCTTCTCTAGGACAAGAAGCACGTCTTTTCATCTTTGTAGCGCAGTGCCCTCTGTGGAGGAAATaGCCACCGTGGAAGTTATCT +
Preference number: 4 (lower is better)
Translates to: LGASLGQEARLFIFVAQCPLWRK*PPWKLS
Trigger: AGATAACTTCCACGGTGGTCATTTCCTCCACAGAGG...GCACTGCGCTACAAAGATGAAAAGACGTGCTTCTTGTCCTAGAGAAGCTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR GCA 90 bp TTAGGAGCTTCTCTAGGACAAGAAGCACGTCTTTTCATCTTTGTAGCGCAGTGCTGTCGCTGTAGAAAATaGCAGGATCGTCGAATCCCG +
Preference number: 4 (lower is better)
Translates to: LGASLGQEARLFIFVAQCCRCRK*QDRRIP
Trigger: CGGGATTCGACGATCCTGGCATTTTCTACAGCGACA...GCACTGCGCTACAAAGATGAAAAGACGTGCTTCTTGTCCTAGAGAAGCTCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR CCA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGACGTGTATACCCCAATaGGAGAACACTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: FIINGCQKHTSQNRARGGTCIPQ*ENTSPQ
Trigger: TTGTGGAGAAGTGTTCTCCCATTGGGGTATACACGT...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR GCA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCTCCCTCTCCTCATTGTaGTCATCCTTGACGATGAAG +
Preference number: 4 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTSLSSL*SSLTMK
Trigger: CTTCATCGTCAAGGATGAGCACAATGAGGAGAGGGA...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS GCA 90 bp CCCACTCGGTACTGCCGCAGGAACTCCTTGAAGCGCCTCTGCAGCTaGGATTTGCGGGCCTGCCCCTCGTCGGCCTGGGCGTCGCCCCCG +
Preference number: 5 (lower is better)
Translates to: PTRYCRRNSLKRLCS*DLRACPSSAWASPP
Trigger: CGGGGGCGACGCCCAGGCCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS TCA 90 bp AGCCCGTGCGGTCGGTGCCCACTCGGTACTGCCGCAGGAACTCCTTaGAGCGCCTCTGCAGCTGCGATTTGCGGGCCTGCCCCTCGTCGG +
Preference number: 5 (lower is better)
Translates to: SPCGRCPLGTAAGTP*SASAAAICGPAPRR
Trigger: CCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCACCGACCGCACGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS GCA 90 bp TCGGTGCCCACTCGGTACTGCCGCAGGAACTCCTTGAAGCGCCTCTaGAGCTGCGATTTGCGGGCCTGCCCCTCGTCGGCCTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: SVPTRYCRRNSLKRL*SCDLRACPSSAWAS
Trigger: CGACGCCCAGGCCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCACCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS-3UTR CAA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCATGGCAAAGCGGCGCTaGAGCTGCTTCTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRMAKRR*SCFSMR
Trigger: CCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCAT...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS CCA 90 bp GGGCGCATGGCAATGTTGGTGAGGGTGTTGCGGCAGCTGCGGCACTaGATAGAGATGCGGGTGGCCTTGGCACGGACCGCAGAGGCCGCG +
Preference number: 5 (lower is better)
Translates to: GRMAMLVRVLRQLRH*IEMRVALARTAEAA
Trigger: CGCGGCCTCTGCGGTCCGTGCCAAGGCCACCCGCATCTCTATCCAGTGCCGCAGCTGCCGCAACACCCTCACCAACATTGCCATGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000444778.1
CDS GCA 90 bp CGGCCCCAGCAAAGCTGCGGCCAGAGCCATCTGTGTCCACCTGGATaGCCAGGACACGGATGTAGGAGCTTCGGATGCCCACGCCCACCC +
Preference number: 5 (lower is better)
Translates to: RPQQSCGQSHLCPPG*PGHGCRSFGCPRPP
Trigger: GGGTGGGCGTGGGCATCCGAAGCTCCTACATCCGTGTCCTGGGCATCCAGGTGGACACAGATGGCTCTGGCCGCAGCTTTGCTGGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000493076.5
CDS-3UTR CAA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGAGATGCGGGTGGCCTaGGCACGGACCGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAAEMRVA*ARTAEA
Trigger: GGCCTCTGCGGTCCGTGCCAAGGCCACCCGCATCTC...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp CAGCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCCCTAGCATCAGCAGGTaGATGTCTCCTCGGCGAGTA +
Preference number: 5 (lower is better)
Translates to: QRQEGRGVGESMSPVRRRPSISR*MSPRRV
Trigger: TACTCGCCGAGGAGACATCAACCTGCTGATGCTAGG...GCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGCGGCCGAACACTGAGTaGGCAGCAGCCAGGACGGAG +
Preference number: 5 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGARPNTE*AAARTE
Trigger: CTCCGTCCTGGCTGCTGCCAACTCAGTGTTCGGCCG...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS CCA 90 bp AGGCTACGAATGCTGGAAGGGCTGGCGTCCGACTTGAGCATGACCTaGATGTCCTGGAGCACCTCCTCCCCAGAAGGCCGGGGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: RLRMLEGLASDLSMT*MSWSTSSPEGRGRV
Trigger: GACCCGGCCCCGGCCTTCTGGGGAGGAGGTGCTCCAGGACATCCAGGTCATGCTCAAGTCGGACGCCAGCCCTTCCAGCATTCGTAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000416905.1
CDS-3UTR CAA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCACTCTGCAGCTGCGATTaGCGGGCCTGCCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAALCSCD*RACPSS
Trigger: CGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAG...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GCGGCAGGAGGGGCGAGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGAAGTTCATCCCTGTATTaGAAGGTGAAGCCCGTGCGG +
Preference number: 5 (lower is better)
Translates to: AAGGARRGRVHESSEAARSSSLY*KVKPVR
Trigger: CCGCACGGGCTTCACCTTCAAATACAGGGATGAACT...TCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCTCGCCCCTCCTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGATGAGCTGCAGCACCTaGTGGATGGCGTGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGAMSCST*WMACSG
Trigger: CCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCAT...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS GCA 90 bp TCCGGGTATTTCTGTGGGAGCACATGGCTGGCTAACGGCACGTGCTaGCCGAGGGGACTCCGACAGAGCCCAGACATCCCCAGGCTCACG +
Preference number: 5 (lower is better)
Translates to: SGYFCGSTWLANGTC*PRGLRQSPDIPRLT
Trigger: CGTGAGCCTGGGGATGTCTGGGCTCTGTCGGAGTCCCCTCGGGCAGCACGTGCCGTTAGCCAGCCATGTGCTCCCACAGAAATACCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp TGCTCCGGGTATTTCTGTGGGAGCACATGGCTGGCTAACGGCACGTaGTGCCCGAGGGGACTCCGACAGAGCCCAGACATCCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CSGYFCGSTWLANGT*CPRGLRQSPDIPRL
Trigger: GAGCCTGGGGATGTCTGGGCTCTGTCGGAGTCCCCTCGGGCAGCACGTGCCGTTAGCCAGCCATGTGCTCCCACAGAAATACCCGGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp GCAAAGCGGCGCTTGAGCTGCTTCTCGATGCGGCTCAGCATCTCCTaGTCCTCCTGGCTGGTGAAGCCCTCCACCCCTGACAGGGTACCG +
Preference number: 5 (lower is better)
Translates to: AKRRLSCFSMRLSIS*SSWLVKPSTPDRVP
Trigger: CGGTACCCTGTCAGGGGTGGAGGGCTTCACCAGCCAGGAGGACCAGGAGATGCTGAGCCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS CCA 90 bp CCTTGTGGATGGCGTGCTCCGGGTATTTCTGTGGGAGCACATGGCTaGCTAACGGCACGTGCTGCCCGAGGGGACTCCGACAGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: PCGWRAPGISVGAHG*LTARAARGDSDRAQ
Trigger: CTGGGCTCTGTCGGAGTCCCCTCGGGCAGCACGTGCCGTTAGCCAGCCATGTGCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCTGCCGCAGGAACTCCTaGAAGCGCCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGCRRNS*KRLCSC
Trigger: GCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCA...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGATGTTGGTGAGGGTGTaGCGGCAGCTGCGGCACTGG +
Preference number: 5 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARMLVRV*RQLRHW
Trigger: CCAGTGCCGCAGCTGCCGCAACACCCTCACCAACAT...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCGGGCGCATGGCAATGTaGGTGAGGGTGTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGGRMAM*VRVLRQ
Trigger: CTGCCGCAACACCCTCACCAACATTGCCATGCGCCC...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGGGCTGCAGCTTCATCTaGCTGAGGGCTTCCGCGATG +
Preference number: 5 (lower is better)
Translates to: GRQRSQQHCQWQAAAGGAGCSFI*LRASAM
Trigger: CATCGCGGAAGCCCTCAGCAAGATGAAGCTGCAGCC...CGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 90 bp CCTCCACATCTGCCTCTGTGGCGAAGGGCTGCAGCTTCATCTTGCTaGGGGCTTCCGCGATGCGCACAATGGCCTCCAGCTGCCGCACAG +
Preference number: 5 (lower is better)
Translates to: PPHLPLWRRAAASSC*GLPRCAQWPPAAAQ
Trigger: CTGTGCGGCAGCTGGAGGCCATTGTGCGCATCGCGGAAGCCCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGAGGCAGATGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS TCA 90 bp AGGCGTGGGCGAGTCCATGAGTCCAGTGAGGCGGCGCGACTCACTTaGGGCGGTAGAGAACCTTGCGCTGCATGCGATGCTGGATCTCGC +
Preference number: 5 (lower is better)
Translates to: RRGRVHESSEAARLT*GGREPCAACDAGSR
Trigger: GCGAGATCCAGCATCGCATGCAGCGCAAGGTTCTCTACCGCCTCAAGTGAGTCGCGCCGCCTCACTGGACTCATGGACTCGCCCACGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 90 bp AAGAGCCGCAGGGCCTCCTCCACATCTGCCTCTGTGGCGAAGGGCTaGAGCTTCATCTTGCTGAGGGCTTCCGCGATGCGCACAATGGCC +
Preference number: 5 (lower is better)
Translates to: KSRRASSTSASVAKG*SFILLRASAMRTMA
Trigger: GGCCATTGTGCGCATCGCGGAAGCCCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGAGGCAGATGTGGAGGAGGCCCTGCGGCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 90 bp GATTCCACCCATGCCCAGGACACGCAGGGTCCACTGCAGCATTTTTaGCACAGGCACCACATGCTGAGCTGGCTCCAGCCCCACGGAGCC +
Preference number: 5 (lower is better)
Translates to: DSTHAQDTQGPLQHF*HRHHMLSWLQPHGA
Trigger: GGCTCCGTGGGGCTGGAGCCAGCTCAGCATGTGGTGCCTGTGGCAAAAATGCTGCAGTGGACCCTGCGTGTCCTGGGCATGGGTGGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp GTGACCCAGGAGGGAAGCCAGCCTGCCCTGGACACATCTACGAGGTaGCCTGAGGAGCCCTCGGCAACCAGGAGGCTCGTGACTTCCAAT +
Preference number: 5 (lower is better)
Translates to: VTQEGSQPALDTSTR*PEEPSATRRLVTSN
Trigger: ATTGGAAGTCACGAGCCTCCTGGTTGCCGAGGGCTCCTCAGGGCACCTCGTAGATGTGTCCAGGGCAGGCTGGCTTCCCTCCTGGGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp ATCTCGCCGCGCCGCAGCATGAGCTGCAGCACCTTGTGGATGGCGTaGTCCGGGTATTTCTGTGGGAGCACATGGCTGGCTAACGGCACG +
Preference number: 5 (lower is better)
Translates to: ISPRRSMSCSTLWMA*SGYFCGSTWLANGT
Trigger: CGTGCCGTTAGCCAGCCATGTGCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp TTGCGCTGCATGCGATGCTGGATCTCGCCGCGCCGCAGCATGAGCTaGAGCACCTTGTGGATGGCGTGCTCCGGGTATTTCTGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LRCMRCWISPRRSMS*STLWMACSGYFCGS
Trigger: GCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCGCATGCAGCGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp GCCCTCCACCCCTGTGGGCATGGAGAAGTGAGGCAGCCGGGGAGCTaGGACAATGGGAGTTCTTGGACAGAGACAGCCTCTAGCCCAAGG +
Preference number: 5 (lower is better)
Translates to: ALHPCGHGEVRQPGS*DNGSSWTETASSPR
Trigger: CCTTGGGCTAGAGGCTGTCTCTGTCCAAGAACTCCCATTGTCCCAGCTCCCCGGCTGCCTCACTTCTCCATGCCCACAGGGGTGGAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp AGCACCTTGTGGATGGCGTGCTCCGGGTATTTCTGTGGGAGCACATaGCTGGCTAACGGCACGTGCTGCCCGAGGGGACTCCGACAGAGC +
Preference number: 5 (lower is better)
Translates to: STLWMACSGYFCGST*LANGTCCPRGLRQS
Trigger: GCTCTGTCGGAGTCCCCTCGGGCAGCACGTGCCGTTAGCCAGCCATGTGCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp CGATGCTGGATCTCGCCGCGCCGCAGCATGAGCTGCAGCACCTTGTaGATGGCGTGCTCCGGGTATTTCTGTGGGAGCACATGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: RCWISPRRSMSCSTL*MACSGYFCGSTWLA
Trigger: AGCCAGCCATGTGCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGATCCAACGTGGACACTaGGAAGAGCCGCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGIQRGH*EEPQGL
Trigger: GAGGCCCTGCGGCTCTTCCAAGTGTCCACGTTGGAT...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 90 bp GAACCTTGCGCTGCATGCGATGCTGGATCTCGCCGCGCCGCAGCATaGGCTGCAGCACCTTGTGGATGGCGTGCTCCGGGTATTTCTGCT +
Preference number: 5 (lower is better)
Translates to: EPCAACDAGSRRAAA*AAAPCGWRAPGISA
Trigger: AGCAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCGCATGCAGCGCAAGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 90 bp CAGAGCCCTGCCCACAGAGCTCCGAGCCAGGGAACCCAGATCAATTaGGACCATGGCCCCTGCATCTGCTCACCTGACAGGGTACCGGAC +
Preference number: 5 (lower is better)
Translates to: QSPAHRAPSQGTQIN*DHGPCICSPDRVPD
Trigger: GTCCGGTACCCTGTCAGGTGAGCAGATGCAGGGGCCATGGTCTCAATTGATCTGGGTTCCCTGGCTCGGAGCTCTGTGGGCAGGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 90 bp CCAGGAGGGAAGCCAGCCTGCCCTGGACACATCTACGAGGTGCCCTaGGGAGCCCTCGGCAACCAGGAGGCTCGTGACTTCCAATTACTG +
Preference number: 5 (lower is better)
Translates to: PGGKPACPGHIYEVP*GALGNQEARDFQLL
Trigger: CAGTAATTGGAAGTCACGAGCCTCCTGGTTGCCGAGGGCTCCTCAGGGCACCTCGTAGATGTGTCCAGGGCAGGCTGGCTTCCCTCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 90 bp GAACCTTGCGCTGCATGCGATGCTGGATCTCGCCGCGCCGCAGCATaGGCTGCAGCACCTTGTGGATGGCGTGCTCCGGGTATTTCTGTG +
Preference number: 5 (lower is better)
Translates to: EPCAACDAGSRRAAA*AAAPCGWRAPGISV
Trigger: CACAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCGCATGCAGCGCAAGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp CTGTGCTCAGACACCTGGGAGCCAATGGCAAAGCGGCGCTTGAGCTaGTTCTCGATGCGGCTCAGCATCTCCTGGTCCTCCTGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: LCSDTWEPMAKRRLS*FSMRLSISWSSWLV
Trigger: CACCAGCCAGGAGGACCAGGAGATGCTGAGCCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 90 bp TTGCGCTGCATGCGATGCTGGATCTCGCCGCGCCGCAGCATGAGCTaGAGCACCTTGTGGATGGCGTGCTCCGGGTATTTCTGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LRCMRCWISPRRSMS*STLWMACSGYFCLV
Trigger: CACCAAGCAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCGCATGCAGCGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCGAGATGCGGGTGGCCTaGGCACGGACCGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: IINGCQKHTSQNRARGGREMRVA*ARTAEA
Trigger: GGCCTCTGCGGTCCGTGCCAAGGCCACCCGCATCTC...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGTTCCCAGGGACGACCTaGTCACACAGGTACCTGTCG +
Preference number: 5 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARFPGTT*SHRYLS
Trigger: CGACAGGTACCTGTGTGACAAGGTCGTCCCTGGGAA...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGGTGGTGATCCCAGCCTaGGCGATAGAGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARVVIPA*AIEMVC
Trigger: GCAGACCATCTCTATCGCCAAGGCTGGGATCACCAC...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGAGGTCCCAGCAACATaGTCAATGGCAGGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAAEVPAT*SMAGSG
Trigger: GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTC...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS GCA 90 bp CTGTATTTGAAGGTGAAGCCCGTGCGGTCGGTGCCCACTCGGTACTaGCGCAGGAACTCCTTGAAGCGCCTCTGCAGCTGCGATTTGCGG +
Preference number: 5 (lower is better)
Translates to: LYLKVKPVRSVPTRY*RRNSLKRLCSCDLR
Trigger: CCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCACCGACCGCACGGGCTTCACCTTCAAATACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS GCA 90 bp CACGGAGCCCAGAGAACGGCCTCTCTCCCCACGTCACTCAGCCCATaGTCAGCTGCTTGGAGGATGGTGTTGCCCACAGTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: HGAQRTASLPTSLSP*SAAWRMVLPTVTAK
Trigger: TTTGGCTGTCACTGTGGGCAACACCATCCTCCAAGCAGCTGAGCATGGGCTGAGTGACGTGGGGAGAGAGGCCGTTCTCTGGGCTCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp CAGCGCAGCAGAGACATGGCCAGAGTGTCACTAGGGACCAAGTCCTaGGGGCCCTTGGAGGCCACAGCAGGACTCCTTTTGTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QRSRDMARVSLGTKS*GPLEATAGLLLLLE
Trigger: CTCCAGCAACAAAAGGAGTCCTGCTGTGGCCTCCAAGGGCCCGCAGGACTTGGTCCCTAGTGACACTCTGGCCATGTCTCTGCTGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp CGACCTTGTCACACAGGTACCTGTCGCAGTAGAGCTGCATGTGTCTaGGCATCTCCCCGTGGGGGACTGCATCAGGCAGCTCCTGCAGCT +
Preference number: 5 (lower is better)
Translates to: RPCHTGTCRSRAACV*ASPRGGLHQAAPAA
Trigger: AGCTGCAGGAGCTGCCTGATGCAGTCCCCCACGGGGAGATGCCCAGACACATGCAGCTCTACTGCGACAGGTACCTGTGTGACAAGGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS-3UTR CAA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCCTCTGCAGCTGCGATTaGCGGGCCTGCCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: IINGCQKHTSQNRARGGRLCSCD*RACPSS
Trigger: CGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAG...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp AGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGCCGCAGGAACTCCTaGAAGCGCCTCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RNPGQSASRPCSLTLTLPCRRNS*KRLCSC
Trigger: GCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCA...TGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGCCATGGCTTCGTGGATaGCCACACGGTCATCTTCTC +
Preference number: 5 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGPWLRG*PHGHLL
Trigger: GAGAAGATGACCGTGTGGCAATCCACGAAGCCATGG...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS GCA 90 bp ATGTGTCTGGGCATCTCCCCGTGGGGGACTGCATCAGGCAGCTCCTaGAGCTTCAGGGTCTGGAAGTCCACGCATTTGCATTTGTCGGGC +
Preference number: 5 (lower is better)
Translates to: MCLGISPWGTASGSS*SFRVWKSTHLHLSG
Trigger: GCCCGACAAATGCAAATGCGTGGACTTCCAGACCCTGAAGCTGCAGGAGCTGCCTGATGCAGTCCCCCACGGGGAGATGCCCAGACACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS GCA 90 bp ATCCAACGTGGACACTTGGAAGAGCCGCAGGGCCTCCTCCACATCTaGCTCTGTGGCGAAGGGCTGCAGCTTCATCTTGCTGAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: IQRGHLEEPQGLLHI*LCGEGLQLHLAEGF
Trigger: GAAGCCCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGAGGCAGATGTGGAGGAGGCCCTGCGGCTCTTCCAAGTGTCCACGTTGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 90 bp CCGCTTGAGTTCATCCCTAGAAGCAGGAGCCAGGTCCAGCTTCAGTaGTGCAGCCCAGCACCCAGAACAGTATCTGGCAGGCAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: PLEFIPRSRSQVQLQ*CSPAPRTVSGRQQV
Trigger: CACCTGCTGCCTGCCAGATACTGTTCTGGGTGCTGGGCTGCAGCACTGAAGCTGGACCTGGCTCCTGCTTCTAGGGATGAACTCAAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416905.1
CDS CCA 90 bp AAAGATGGAGGGGGCGATGCTCTTGGAGATGACCTCATAGACATTTaGGAGGGCAGCCAGGCGACGGAACTCCTCCTCCTCCTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: KDGGGDALGDDLIDI*EGSQATELLLLLGA
Trigger: AGCCCCCAGGAGGAGGAGGAGTTCCGTCGCCTGGCTGCCCTCCCAAATGTCTATGAGGTCATCTCCAAGAGCATCGCCCCCTCCATCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS CCA 90 bp CGATGCTGGATCTCGCCGCGCCGCAGCATGAGCTGCAGCACCTTGTaGATGGCGTGCTCCGGGTATTTCTGCTTGGTGAAGTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: RCWISPRRSMSCSTL*MACSGYFCLVKSLM
Trigger: CATCAAGGACTTCACCAAGCAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp CACAGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCATGTTGGTGAGGGTGTaGCGGCAGCTGCGGCACTGG +
Preference number: 5 (lower is better)
Translates to: HSYTWPTRKELAGVLVPAMLVRV*RQLRHW
Trigger: CCAGTGCCGCAGCTGCCGCAACACCCTCACCAACAT...GGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp CTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATGAGGGCCCTAGCATCAGCAGGTaGATGTCTCCTCGGCGAGTA +
Preference number: 5 (lower is better)
Translates to: LASLPPDPVPSHLPCHEGPSISR*MSPRRV
Trigger: TACTCGCCGAGGAGACATCAACCTGCTGATGCTAGG...GCCCTCATGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp GTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGAGAGTGATGACATGCTaGGCCAGCATCACATCCCTC +
Preference number: 5 (lower is better)
Translates to: VGRQRSQQHCQWQAAAGGRVMTC*ASITSL
Trigger: GAGGGATGTGATGCTGGCCAAGCATGTCATCACTCT...CCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 90 bp ACCTGCAATGTCTCATGTGACAGCAAGTGTCTCCAGGGTAGAGGCTaGGTCTTCACCAAGGGGGACAGGAGGAACAGGCCCCACCCACCC +
Preference number: 5 (lower is better)
Translates to: TCNVSCDSKCLQGRG*VFTKGDRRNRPHPP
Trigger: GGGTGGGTGGGGCCTGTTCCTCCTGTCCCCCTTGGTGAAGACTCAGCCTCTACCCTGGAGACACTTGCTGTCACATGAGACATTGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 90 bp AGTCAGAAAAGGGCACCGAGTGTGCCAGGGTGGTGCAGGCCTGATTaGGGAGACAGGATATGGCACATGTGGGGACACTCCAGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: SQKRAPSVPGWCRPD*GDRIWHMWGHSRPS
Trigger: GCTTGGCCTGGAGTGTCCCCACATGTGCCATATCCTGTCTCCTCAATCAGGCCTGCACCACCCTGGCACACTCGGTGCCCTTTTCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp TCCCCGTGGGGGACTGCATCAGGCAGCTCCTGCAGCTTCAGGGTCTaGAAGTCCACGCATTTGCATTTGTCGGGCATGATGAAGTACGGG +
Preference number: 5 (lower is better)
Translates to: SPWGTASGSSCSFRV*KSTHLHLSGMMKYG
Trigger: CCCGTACTTCATCATGCCCGACAAATGCAAATGCGTGGACTTCCAGACCCTGAAGCTGCAGGAGCTGCCTGATGCAGTCCCCCACGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS CCA 90 bp AGAACGGCCTCTCTCCCCACGTCACTCAGCCCATGCTCAGCTGCTTaGAGGATGGTGTTGCCCACAGTGACAGCCAAACAGAAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RTASLPTSLSPCSAA*RMVLPTVTAKQKGR
Trigger: CCTGCCTTTCTGTTTGGCTGTCACTGTGGGCAACACCATCCTCCAAGCAGCTGAGCATGGGCTGAGTGACGTGGGGAGAGAGGCCGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp AGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCATCATCAGCTACCTCCTaGGCAGCTTCCTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RNPGQSASRPCSLTLTLPSSATS*AASSSS
Trigger: GCTGCTGGAGGAAGCTGCCAAGGAGGTAGCTGATGA...TGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCGGGCGCATGGCAATGTaGGTGAGGGTGTTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: IINGCQKHTSQNRARGGRGRMAM*VRVLRQ
Trigger: CTGCCGCAACACCCTCACCAACATTGCCATGCGCCC...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp CAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGCGTTGGAAGTCCACGCATTaGCATTTGTCGGGCATGATG +
Preference number: 5 (lower is better)
Translates to: QRSQQHCQWQAAAGGARRWKSTH*HLSGMM
Trigger: CATCATGCCCGACAAATGCAAATGCGTGGACTTCCA...ACGCCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGCATGAAGTCAATGTaGTCCTCCCCCTTCGTCTCA +
Preference number: 5 (lower is better)
Translates to: AAVGRQRSQQHCQWQAAAGMKSM*SSPFVS
Trigger: TGAGACGAAGGGGGAGGACAACATTGACTTCATGCC...TGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCACATCCCTCTCCTCATaGTGCTCATCCTTGACGATG +
Preference number: 5 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGTSLSS*CSSLTM
Trigger: CATCGTCAAGGATGAGCACAATGAGGAGAGGGATGT...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCATGAGCTGCAGCACCTaGTGGATGGCGTGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: IINGCQKHTSQNRARGGRMSCST*WMACSG
Trigger: CCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCAT...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 90 bp TCATGTCTGTGCCCCCAAAGATGGAGGGGGCGATGCTCTTGGAGATaGCCTCATAGACATTTGGGAGGGCAGCCAGGCGACGGAACTCCT +
Preference number: 5 (lower is better)
Translates to: SCLCPQRWRGRCSWR*PHRHLGGQPGDGTP
Trigger: AGGAGTTCCGTCGCCTGGCTGCCCTCCCAAATGTCTATGAGGTCATCTCCAAGAGCATCGCCCCCTCCATCTTTGGGGGCACAGACATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS TCA 90 bp AGTAAGTCAGAAAAGGGCACCGAGTGTGCCAGGGTGGTGCAGGCCTaGTTGAGGAGACAGGATATGGCACATGTGGGGACACTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SKSEKGTECARVVQA*LRRQDMAHVGTLQA
Trigger: GGCCTGGAGTGTCCCCACATGTGCCATATCCTGTCTCCTCAATCAGGCCTGCACCACCCTGGCACACTCGGTGCCCTTTTCTGACTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp CTTGGCCAGGTCAATCTCGCCCTCCACAGCCTGTGTCTGTGTCAGTaGGCTCACGTGCAGAGTGATGACATGCTTGGCCAGCATCACATC +
Preference number: 5 (lower is better)
Translates to: LGQVNLALHSLCLCQ*AHVQSDDMLGQHHI
Trigger: GATGTGATGCTGGCCAAGCATGTCATCACTCTGCACGTGAGCGCACTGACACAGACACAGGCTGTGGAGGGCGAGATTGACCTGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 90 bp CCTGAGGAGCCCTCGGCAACCAGGAGGCTCGTGACTTCCAATTACTaGCACAGAGGCCTTGGTGTTTCAGCTAAGGAGATGGTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: PEEPSATRRLVTSNY*HRGLGVSAKEMVGS
Trigger: TGAGCCCACCATCTCCTTAGCTGAAACACCAAGGCCTCTGTGGCAGTAATTGGAAGTCACGAGCCTCCTGGTTGCCGAGGGCTCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp CGGCTGGCTGCTTGTACAAGTAGTCGGCCAGGTCCTCATCAAAGCTaGCCAGATCCTCCATCTCCACCTCAATCCAGTACTCCCCCAGGT +
Preference number: 5 (lower is better)
Translates to: RLAACTSSRPGPHQS*PDPPSPPQSSTPPG
Trigger: ACCTGGGGGAGTACTGGATTGAGGTGGAGATGGAGGATCTGGCCAGCTTTGATGAGGACCTGGCCGACTACTTGTACAAGCAGCCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
CDS CCA 90 bp CTCACCTGCTTGGTGAAGTCCTTGATGATGCTGTGCTCAGACACCTaGGAGCCAATGGCAAAGCGGCGCTTGAGCTGCTTCTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: LTCLVKSLMMLCSDT*EPMAKRRLSCFSMR
Trigger: CCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCACAGCATCATCAAGGACTTCACCAAGCAGGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp AGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCTGGTTCCCAGGGACGACCTaGTCACACAGGTACCTGTCG +
Preference number: 5 (lower is better)
Translates to: SYTWPTRKELAGVLVPAWFPGTT*SHRYLS
Trigger: CGACAGGTACCTGTGTGACAAGGTCGTCCCTGGGAA...CCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCATCCAACGTGGACACTaGGAAGAGCCGCAGGGCCTC +
Preference number: 5 (lower is better)
Translates to: IINGCQKHTSQNRARGGRIQRGH*EEPQGL
Trigger: GAGGCCCTGCGGCTCTTCCAAGTGTCCACGTTGGAT...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp ATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGCGCATGGCAAAGCGGCGCTaGAGCTGCTTCTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: IINGCQKHTSQNRARGGRMAKRR*SCFSMR
Trigger: CCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCAT...GCGCCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp CTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGTGCTTGGTGAAGTCCTaGATGATGCTGTGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: LQWGGRGPSNIVNGRQRQCLVKS*MMLCSD
Trigger: GTCTGAGCACAGCATCATCAAGGACTTCACCAAGCA...CTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGTCCGGGTATTTCTGCTaGGTGAAGTCCTTGATGATG +
Preference number: 5 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARSGYFC*VKSLMM
Trigger: CATCATCAAGGACTTCACCAAGCAGAAATACCCGGA...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 90 bp GGGAACCCAGATCAATTGAGACCATGGCCCCTGCATCTGCTCACCTaGCAGGGTACCGGACAAGGCAGCATCCAACGTGGACACTTGGAA +
Preference number: 5 (lower is better)
Translates to: GNPDQLRPWPLHLLT*QGTGQGSIQRGHLE
Trigger: TTCCAAGTGTCCACGTTGGATGCTGCCTTGTCCGGTACCCTGTCAGGTGAGCAGATGCAGGGGCCATGGTCTCAATTGATCTGGGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp TCAATCTCGCCCTCCACAGCCTGTGTCTGTGTCAGTGCGCTCACGTaGAGAGTGATGACATGCTTGGCCAGCATCACATCCCTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SISPSTACVCVSALT*RVMTCLASITSLSS
Trigger: TGAGGAGAGGGATGTGATGCTGGCCAAGCATGTCATCACTCTGCACGTGAGCGCACTGACACAGACACAGGCTGTGGAGGGCGAGATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS CCA 90 bp GTCCACGCATTTGCATTTGTCGGGCATGATGAAGTACGGGTCCAATaGGCATTTGGGGCGCCCAGCCTGATCTGTGTTGCACTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: VHAFAFVGHDEVRVQ*AFGAPSLICVALPG
Trigger: CCCAGGAAGTGCAACACAGATCAGGCTGGGCGCCCCAAATGCCCATTGGACCCGTACTTCATCATGCCCGACAAATGCAAATGCGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS CCA 90 bp GGTGGTGGCCTGACTCTCGCTGAACTCGCTAACTCATTTGTACGCTaGTTTAGGAGGCTTAGTGCCAGCCCACAGAGCCCTCCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: GGGLTLAELANSFVR*FRRLSASPQSPPKA
Trigger: GGCTTTTGGAGGGCTCTGTGGGCTGGCACTAAGCCTCCTAAACCAGCGTACAAATGAGTTAGCGAGTTCAGCGAGAGTCAGGCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp GAAATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCCTCTGACTCTCTGCAGCTGCGATTaGCGGGCCTGCCCCTCGTCG +
Preference number: 5 (lower is better)
Translates to: EMTTVEVICWSSRLTPLTLCSCD*RACPSS
Trigger: CGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAG...AGTCAGAGGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR CAA 90 bp AGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTCCCTCACACTTACCCTGCCAAGTTCATCCCTGTATTaGAAGGTGAAGCCCGTGCGG +
Preference number: 5 (lower is better)
Translates to: RNPGQSASRPCSLTLTLPSSSLY*KVKPVR
Trigger: CCGCACGGGCTTCACCTTCAAATACAGGGATGAACT...TGGCAGGGTAAGTGTGAGGGAACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp AGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCTGGCCATGGCTTCGTGGATaGCCACACGGTCATCTTCTC +
Preference number: 5 (lower is better)
Translates to: SYTWPTRKELAGVLVPAWPWLRG*PHGHLL
Trigger: GAGAAGATGACCGTGTGGCAATCCACGAAGCCATGG...CCAGGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp GGCTGCAGTGGGGAGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCTCATTGTGCTCATCCTaGACGATGAAGATCATGTCG +
Preference number: 5 (lower is better)
Translates to: GCSGEAEVPATLSMAGSGSLCSS*TMKIMS
Trigger: CGACATGATCTTCATCGTCAAGGATGAGCACAATGA...GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCTCCCCACTGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp AGGCAGAGGTCCCAGCAACATTGTCAATGGCAGGCAGCGGCAGGAGGGGCGAGGTCATCTTCTCGCATCTaGTCAAACTCGTCAATACAG +
Preference number: 5 (lower is better)
Translates to: RQRSQQHCQWQAAAGGARSSSRI*SNSSIQ
Trigger: CTGTATTGACGAGTTTGACAAGATGCGAGAAGATGA...CCTCGCCCCTCCTGCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp CTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGCCTCCAGACCCTGTTAGAGTGATGACATGCTaGGCCAGCATCACATCCCTC +
Preference number: 5 (lower is better)
Translates to: LSGRSKSETLASLPPDPVRVMTC*ASITSL
Trigger: GAGGGATGTGATGCTGGCCAAGCATGTCATCACTCT...AACAGGGTCTGGAGGCAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp AAAAGTGAAATGTCTCGCCCAAGGCCACACAGTTACACGTGGCCCACCAGGAAAGAGGTCCCAGCAACATaGTCAATGGCAGGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: KSEMSRPRPHSYTWPTRKEVPAT*SMAGSG
Trigger: GCCGCTGCCTGCCATTGACAATGTTGCTGGGACCTC...TTTCCTGGTGGGCCACGTGTAACTGTGTGGCCTTGGGCGAGACATTTCACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS TCA 90 bp CCGCATGATGATGTAGCGGTTCTTCAGTTTCTCTGCAGCCTCTGCTaGCAGCCGGGGGCCACACTTCACTCGGCAGTAGGCAATAAACTT +
Preference number: 5 (lower is better)
Translates to: PHDDVAVLQFLCSLC*QPGATLHSAVGNKL
Trigger: AAGTTTATTGCCTACTGCCGAGTGAAGTGTGGCCCCCGGCTGTCAGCAGAGGCTGCAGAGAAACTGAAGAACCGCTACATCATCATGCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS TCA 90 bp GTAGCCTGGCTCATGATCGGTGCCTGGGACAGTCTGTTGAAAGGCTaGCCGAAACCAGACAGTATGGCTTATGGTGTGGAAAACGCTGGC +
Preference number: 5 (lower is better)
Translates to: VAWLMIGAWDSLLKG*PKPDSMAYGVENAG
Trigger: GCCAGCGTTTTCCACACCATAAGCCATACTGTCTGGTTTCGGTCAGCCTTTCAACAGACTGTCCCAGGCACCGATCATGAGCCAGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp TATTTCTGCTTGGTGAAGTCCTTGATGATGCTGTGCTCAGACACCTaGGAGCCAATGGCAAAGCGGCGCTTGAGCTGCTTCTCGATGCGG +
Preference number: 5 (lower is better)
Translates to: YFCLVKSLMMLCSDT*EPMAKRRLSCFSMR
Trigger: CCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCACAGCATCATCAAGGACTTCACCAAGCAGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 90 bp GGTGTTGCCCACAGTGACAGCCAAACAGAAAGGCAGGTGGTGGCCTaGCTCTCGCTGAACTCGCTAACTCATTTGTACGCTGGTTTAGGA +
Preference number: 5 (lower is better)
Translates to: GVAHSDSQTERQVVA*LSLNSLTHLYAGLG
Trigger: TCCTAAACCAGCGTACAAATGAGTTAGCGAGTTCAGCGAGAGTCAGGCCACCACCTGCCTTTCTGTTTGGCTGTCACTGTGGGCAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp AGTGCTGCAGCCCAGCACCCAGAACAGTATCTGGCAGGCAGCAGGTaGTCAATCAATGAAGGTGCAAGACTGTATTTGAAGGTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: SAAAQHPEQYLAGSR*SINEGARLYLKVKP
Trigger: GGGCTTCACCTTCAAATACAGTCTTGCACCTTCATTGATTGAGCACCTGCTGCCTGCCAGATACTGTTCTGGGTGCTGGGCTGCAGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416905.1
CDS GCA 90 bp CCTTCGAGTGTCAGCTGTCTCATTTCTAACATGGGCAGGACTGACTaGTCACCTGGCTTCCAGGGGGCAGCTGTAAGGCAAAATGCAAGA +
Preference number: 5 (lower is better)
Translates to: PSSVSCLISNMGRTD*SPGFQGAAVRQNAR
Trigger: TCTTGCATTTTGCCTTACAGCTGCCCCCTGGAAGCCAGGTGAGCAGTCAGTCCTGCCCATGTTAGAAATGAGACAGCTGACACTCGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp GGACAGTCTGTTGAAAGGCTGACCGAAACCAGACAGTATGGCTTATaGTGTGGAAAACGCTGGCCTAGGGGCCAGGAGACTTGCATTCCA +
Preference number: 5 (lower is better)
Translates to: GQSVERLTETRQYGL*CGKRWPRGQETCIP
Trigger: TGGAATGCAAGTCTCCTGGCCCCTAGGCCAGCGTTTTCCACACCATAAGCCATACTGTCTGGTTTCGGTCAGCCTTTCAACAGACTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp CACTCACTCCATGGGAAAGAGCACGTCCTCCTTTTCCAACACACCTaGCCCTGCCATCATCTCCCTCACTGCCTTTTTCACTACCTACAC +
Preference number: 5 (lower is better)
Translates to: HSLHGKEHVLLFQHT*PCHHLPHCLFHYLH
Trigger: GTGTAGGTAGTGAAAAAGGCAGTGAGGGAGATGATGGCAGGGCCAGGTGTGTTGGAAAAGGAGGACGTGCTCTTTCCCATGGAGTGAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGGGCTGGCGTCCGACTaGAGCATGACCTGGATGTCC +
Preference number: 5 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTGLASD*SMTWMS
Trigger: GGACATCCAGGTCATGCTCAAGTCGGACGCCAGCCC...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp CCACAGATACCTGAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACGGCCGAACACTGAGTaGGCAGCAGCCAGGACGGAG +
Preference number: 5 (lower is better)
Translates to: PQIPEHTVALLLTDAKSTRPNTE*AAARTE
Trigger: CTCCGTCCTGGCTGCTGCCAACTCAGTGTTCGGCCG...TGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp TTACCCTGCCATGAGGGCACGATGGAGGTGACAGGTCACCGAGTGCACAAACCCTCATTGTGCTCATCCTaGACGATGAAGATCATGTCG +
Preference number: 5 (lower is better)
Translates to: LPCHEGTMEVTGHRVHKPSLCSS*TMKIMS
Trigger: CGACATGATCTTCATCGTCAAGGATGAGCACAATGA...GGGTTTGTGCACTCGGTGACCTGTCACCTCCATCGTGCCCTCATGGCAGGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp CACAGTTACACGTGGCCCACCAGGAAAGAACTGGCTGGAGTCCTAGTTCCTGCCTCCGGGTATTTCTGCTaGGTGAAGTCCTTGATGATG +
Preference number: 5 (lower is better)
Translates to: HSYTWPTRKELAGVLVPASGYFC*VKSLMM
Trigger: CATCATCAAGGACTTCACCAAGCAGAAATACCCGGA...GGCAGGAACTAGGACTCCAGCCAGTTCTTTCCTGGTGGGCCACGTGTAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS TCA 90 bp GGAGAAAGGAGAAAAGCTGAGATTCTGACTTGGACAGCAAGTCTCTaGTTCCACCCATGCCCAGGACACGCAGGGTCCACTGCAGCATTT +
Preference number: 5 (lower is better)
Translates to: GERRKAEILTWTASL*FHPCPGHAGSTAAF
Trigger: AAATGCTGCAGTGGACCCTGCGTGTCCTGGGCATGGGTGGAATCAGAGACTTGCTGTCCAAGTCAGAATCTCAGCTTTTCTCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 90 bp AAGGAACAGATTTTCCCCAGCGTAGGTAGCCTGGCTCATGATCGGTaGCTGGGACAGTCTGTTGAAAGGCTGACCGAAACCAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: KEQIFPSVGSLAHDR*LGQSVERLTETRQY
Trigger: ATACTGTCTGGTTTCGGTCAGCCTTTCAACAGACTGTCCCAGGCACCGATCATGAGCCAGGCTACCTACGCTGGGGAAAATCTGTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 90 bp CCAATTACTGCCACAGAGGCCTTGGTGTTTCAGCTAAGGAGATGGTaGGCTCATGGTCAAGAAGTCATTGAGAGGGGAGTCTGTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PITATEALVFQLRRW*AHGQEVIERGVCEA
Trigger: TGCCTCACAGACTCCCCTCTCAATGACTTCTTGACCATGAGCCCACCATCTCCTTAGCTGAAACACCAAGGCCTCTGTGGCAGTAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGGCTGCAGCTTCATCTaGCTGAGGGCTTCCGCGATG +
Preference number: 5 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTGCSFI*LRASAM
Trigger: CATCGCGGAAGCCCTCAGCAAGATGAAGCTGCAGCC...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GACTTACCCAGAAGTCTGAGTGGCAGATCCAAGTCAGAAACCCTGGCCAGTCTGTGCTTGGTGAAGTCCTaGATGATGCTGTGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: DLPRSLSGRSKSETLASLCLVKS*MMLCSD
Trigger: GTCTGAGCACAGCATCATCAAGGACTTCACCAAGCA...CAGACTGGCCAGGGTTTCTGACTTGGATCTGCCACTCAGACTTCTGGGTAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS CCA 90 bp CTTCCAATTACTGCCACAGAGGCCTTGGTGTTTCAGCTAAGGAGATaGTGGGCTCATGGTCAAGAAGTCATTGAGAGGGGAGTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LPITATEALVFQLRR*WAHGQEVIERGVCE
Trigger: CTCACAGACTCCCCTCTCAATGACTTCTTGACCATGAGCCCACCATCTCCTTAGCTGAAACACCAAGGCCTCTGTGGCAGTAATTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGTGGTGATCCCAGCCTaGGCGATAGAGATGGTCTGC +
Preference number: 5 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTVVIPA*AIEMVC
Trigger: GCAGACCATCTCTATCGCCAAGGCTGGGATCACCAC...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp GTGGAGGAAATGACCACCGTGGAAGTTATCTGTTGGTCTTCACGACTCACTCCTTATCAGCTGCTGTATTaGAAGGTGAAGCCCGTGCGG +
Preference number: 5 (lower is better)
Translates to: VEEMTTVEVICWSSRLTPYQLLY*KVKPVR
Trigger: CCGCACGGGCTTCACCTTCAAATACAGCAGCTGATA...AGGAGTGAGTCGTGAAGACCAACAGATAACTTCCACGGTGGTCATTTCCTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR CAA 90 bp AGAAGCACGTCTTTTCATCTTTGTAGCGCAGTGCCTGGCACACAGGTGGGCAATCGTGGAAGTTATCTGTaGGTCTTCACGACTCACTCC +
Preference number: 5 (lower is better)
Translates to: RSTSFHLCSAVPGTQVGNRGSYL*VFTTHS
Trigger: GGAGTGAGTCGTGAAGACCAACAGATAACTTCCACG...ATTGCCCACCTGTGTGCCAGGCACTGCGCTACAAAGATGAAAAGACGTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS-3UTR CAA 90 bp GACTTTCTGAAATTAGGCAAAGTGACCGAGGCACTTGGCAACACTCCTTCCTCCTGGAAGTCCACGCATTaGCATTTGTCGGGCATGATG +
Preference number: 5 (lower is better)
Translates to: DFLKLGKVTEALGNTPSSWKSTH*HLSGMM
Trigger: CATCATGCCCGACAAATGCAAATGCGTGGACTTCCA...GGAGGAAGGAGTGTTGCCAAGTGCCTCGGTCACTTTGCCTAATTTCAGAAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGACATCCCTCTCCTCATaGTGCTCATCCTTGACGATG +
Preference number: 5 (lower is better)
Translates to: FIINGCQKHTSQNRARGGTSLSS*CSSLTM
Trigger: CATCGTCAAGGATGAGCACAATGAGGAGAGGGATGT...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp TTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGGCGGGATAAACTTCTTCAGCTaGGCCAGGTCAATCTCGCCC +
Preference number: 5 (lower is better)
Translates to: FIINGCQKHTSQNRARGGINFFS*ARSISP
Trigger: GGGCGAGATTGACCTGGCCAAGCTGAAGAAGTTTAT...CCCGCCTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS GCA 90 bp GTCCTCCTTTTCCAACACACCTGGCCCTGCCATCATCTCCCTCACTaGCTTTTTCACTACCTACACTACCTGCATTTGTTTCTCTACTGT +
Preference number: 5 (lower is better)
Translates to: VLLFQHTWPCHHLPH*LFHYLHYLHLFLYC
Trigger: ACAGTAGAGAAACAAATGCAGGTAGTGTAGGTAGTGAAAAAGGCAGTGAGGGAGATGATGGCAGGGCCAGGTGTGTTGGAAAAGGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp GTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCGCGCTAGAGATAAACTTCTTCAGCTaGGCCAGGTCAATCTCGCCC +
Preference number: 5 (lower is better)
Translates to: VALLLTDAKSTLPRTALEINFFS*ARSISP
Trigger: GGGCGAGATTGACCTGGCCAAGCTGAAGAAGTTTAT...CTCTAGCGCGGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 90 bp GAGCATCAACTGTTGTTCCTAGCCAGTGAGAAGGGTTATCATCAATaGCCTGGGTCAAGAGGATTGTGTTCAAGGGTCTGGAGAGAAGCT +
Preference number: 5 (lower is better)
Translates to: EHQLLFLASEKGYHQ*PGSRGLCSRVWREA
Trigger: AGCTTCTCTCCAGACCCTTGAACACAATCCTCTTGACCCAGGTCATTGATGATAACCCTTCTCACTGGCTAGGAACAACAGTTGATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS-3UTR CAA 90 bp CCACAGATACCTGAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACAGGCATGAAGTCAATGTaGTCCTCCCCCTTCGTCTCA +
Preference number: 5 (lower is better)
Translates to: PQIPEHTVALLLTDAKSTGMKSM*SSPFVS
Trigger: TGAGACGAAGGGGGAGGACAACATTGACTTCATGCC...TGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp GAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACACTTCCCAGAACCTCCACGCATTTGCATTaGTCGGGCATGATGAAGTAC +
Preference number: 5 (lower is better)
Translates to: EHTVALLLTDAKSTLPRTSTHLH*SGMMKY
Trigger: GTACTTCATCATGCCCGACAAATGCAAATGCGTGGA...GGTTCTGGGAAGTGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS-3UTR CAA 90 bp CACAACCCTGTGAAGCAGGTTCTAGTATCAGCCTGCTTACAGATAAGGAAACTATCCACGCATTTGCATTaGTCGGGCATGATGAAGTAC +
Preference number: 5 (lower is better)
Translates to: HNPVKQVLVSACLQIRKLSTHLH*SGMMKY
Trigger: GTACTTCATCATGCCCGACAAATGCAAATGCGTGGA...TAGTTTCCTTATCTGTAAGCAGGCTGATACTAGAACCTGCTTCACAGGGTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS-3UTR CAA 90 bp CCACAGATACCTGAACACACCGTGGCTTTATTATTAACGGATGCCAAAAGCACATCATCTTCTCGCATCTaGTCAAACTCGTCAATACAG +
Preference number: 5 (lower is better)
Translates to: PQIPEHTVALLLTDAKSTSSSRI*SNSSIQ
Trigger: CTGTATTGACGAGTTTGACAAGATGCGAGAAGATGA...TGTGCTTTTGGCATCCGTTAATAATAAAGCCACGGTGTGTTCAGGTATCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000216122.9
CDS TCA 90 bp CGTAAGTTTTCAGGATTCATGAACTGCTTGGAAAATCATACATCCTaGTTACGTAATCTGCATGAAGGAATTGTGCTAAACACCACATGC +
Preference number: 5 (lower is better)
Translates to: RKFSGFMNCLENHTS*LRNLHEGIVLNTTC
Trigger: GCATGTGGTGTTTAGCACAATTCCTTCATGCAGATTACGTAATCAGGATGTATGATTTTCCAAGCAGTTCATGAATCCTGAAAACTTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000417343.1
CDS GCA 72 bp TCCTTGAAGCGCCTCTGCAGCTGCGATTTGCGGGCCTaGCCCTCGTCGGCCTGGGCGTCGCCCCCGAAGCTG +
Preference number: 6 (lower is better)
Translates to: SLKRLCSCDLRA*PSSAWASPPKL
Trigger: CAGCTTCGGGGGCGACGCCCAGGCCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS CAA 72 bp CGCAGGAACTCCTTGAAGCGCCTCTGCAGCTGCGATTaGCGGGCCTGCCCCTCGTCGGCCTGGGCGTCGCCC +
Preference number: 6 (lower is better)
Translates to: RRNSLKRLCSCD*RACPSSAWASP
Trigger: GGGCGACGCCCAGGCCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS CAA 90 bp CGGTACTGCCGCAGGAACTCCTTGAAGCGCCTCTGCAGCTGCGATTaGCGGGCCTGCCCCTCGTCGGCCTGGGCGTCGCCCCCGAAGCTG +
Preference number: 6 (lower is better)
Translates to: RYCRRNSLKRLCSCD*RACPSSAWASPPKL
Trigger: CAGCTTCGGGGGCGACGCCCAGGCCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS CCA 72 bp GGGCTGGCGTCCGACTTGAGCATGACCTGGATGTCCTaGAGCACCTCCTCCCCAGAAGGCCGGGGCCGGGTC +
Preference number: 6 (lower is better)
Translates to: GLASDLSMTWMS*STSSPEGRGRV
Trigger: GACCCGGCCCCGGCCTTCTGGGGAGGAGGTGCTCCAGGACATCCAGGTCATGCTCAAGTCGGACGCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000416905.1
CDS CAA 90 bp AAGCCCGTGCGGTCGGTGCCCACTCGGTACTGCCGCAGGAACTCCTaGAAGCGCCTCTGCAGCTGCGATTTGCGGGCCTGCCCCTCGTCG +
Preference number: 6 (lower is better)
Translates to: KPVRSVPTRYCRRNS*KRLCSCDLRACPSS
Trigger: CGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCACCGACCGCACGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS GCA 72 bp TACTGCCGCAGGAACTCCTTGAAGCGCCTCTGCAGCTaGGATTTGCGGGCCTGCCCCTCGTCGGCCTGGGCG +
Preference number: 6 (lower is better)
Translates to: YCRRNSLKRLCS*DLRACPSSAWA
Trigger: CGCCCAGGCCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS TCA 72 bp GGTCGGTGCCCACTCGGTACTGCCGCAGGAACTCCTTaGAGCGCCTCTGCAGCTGCGATTTGCGGGCCTGCC +
Preference number: 6 (lower is better)
Translates to: GRCPLGTAAGTP*SASAAAICGPA
Trigger: GGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCACCGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS TCA 72 bp GCTGCATGCGATGCTGGATCTCGCCGCGCCGCAGCATaGGCTGCAGCACCTTGTGGATGGCGTGCTCCGGGT +
Preference number: 6 (lower is better)
Translates to: AACDAGSRRAAA*AAAPCGWRAPG
Trigger: ACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCGCATGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 72 bp ACTCGGTACTGCCGCAGGAACTCCTTGAAGCGCCTCTaGAGCTGCGATTTGCGGGCCTGCCCCTCGTCGGCC +
Preference number: 6 (lower is better)
Translates to: TRYCRRNSLKRL*SCDLRACPSSA
Trigger: GGCCGACGAGGGGCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS GCA 72 bp GAGGGAAGCCAGCCTGCCCTGGACACATCTACGAGGTaGCCTGAGGAGCCCTCGGCAACCAGGAGGCTCGTG +
Preference number: 6 (lower is better)
Translates to: EGSQPALDTSTR*PEEPSATRRLV
Trigger: CACGAGCCTCCTGGTTGCCGAGGGCTCCTCAGGGCACCTCGTAGATGTGTCCAGGGCAGGCTGGCTTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp CGGTCGGTGCCCACTCGGTACTGCCGCAGGAACTCCTaGAAGCGCCTCTGCAGCTGCGATTTGCGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: RSVPTRYCRRNS*KRLCSCDLRAC
Trigger: GCAGGCCCGCAAATCGCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCACCGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS CAA 72 bp CGGCAGCTGCGGCACTGGATAGAGATGCGGGTGGCCTaGGCACGGACCGCAGAGGCCGCGATGATGATGCCA +
Preference number: 6 (lower is better)
Translates to: RQLRHWIEMRVA*ARTAEAAMMMP
Trigger: TGGCATCATCATCGCGGCCTCTGCGGTCCGTGCCAAGGCCACCCGCATCTCTATCCAGTGCCGCAGCTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000444778.1
CDS GCA 72 bp AAGGTGAAGCCCGTGCGGTCGGTGCCCACTCGGTACTaGCGCAGGAACTCCTTGAAGCGCCTCTGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: KVKPVRSVPTRY*RRNSLKRLCSC
Trigger: GCAGCTGCAGAGGCGCTTCAAGGAGTTCCTGCGGCAGTACCGAGTGGGCACCGACCGCACGGGCTTCACCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000451351.5
CDS GCA 72 bp TTCTGTGGGAGCACATGGCTGGCTAACGGCACGTGCTaGCCGAGGGGACTCCGACAGAGCCCAGACATCCCC +
Preference number: 6 (lower is better)
Translates to: FCGSTWLANGTC*PRGLRQSPDIP
Trigger: GGGGATGTCTGGGCTCTGTCGGAGTCCCCTCGGGCAGCACGTGCCGTTAGCCAGCCATGTGCTCCCACAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 90 bp AGGGTGTTGCGGCAGCTGCGGCACTGGATAGAGATGCGGGTGGCCTaGGCACGGACCGCAGAGGCCGCGATGATGATGCCAGGGATCTTC +
Preference number: 6 (lower is better)
Translates to: RVLRQLRHWIEMRVA*ARTAEAAMMMPGIF
Trigger: GAAGATCCCTGGCATCATCATCGCGGCCTCTGCGGTCCGTGCCAAGGCCACCCGCATCTCTATCCAGTGCCGCAGCTGCCGCAACACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000444778.1
CDS CAA 90 bp GCCTCCTCCACATCTGCCTCTGTGGCGAAGGGCTGCAGCTTCATCTaGCTGAGGGCTTCCGCGATGCGCACAATGGCCTCCAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: ASSTSASVAKGCSFI*LRASAMRTMASSCR
Trigger: GCGGCAGCTGGAGGCCATTGTGCGCATCGCGGAAGCCCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGAGGCAGATGTGGAGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS TCA 72 bp AAGCCAGCCTGCCCTGGACACATCTACGAGGTGCCCTaGGGAGCCCTCGGCAACCAGGAGGCTCGTGACTTC +
Preference number: 6 (lower is better)
Translates to: KPACPGHIYEVP*GALGNQEARDF
Trigger: GAAGTCACGAGCCTCCTGGTTGCCGAGGGCTCCTCAGGGCACCTCGTAGATGTGTCCAGGGCAGGCTGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp AGGGCCTCCTCCACATCTGCCTCTGTGGCGAAGGGCTaGAGCTTCATCTTGCTGAGGGCTTCCGCGATGCGC +
Preference number: 6 (lower is better)
Translates to: RASSTSASVAKG*SFILLRASAMR
Trigger: GCGCATCGCGGAAGCCCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGAGGCAGATGTGGAGGAGGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS CCA 72 bp ATGCTGGAAGGGCTGGCGTCCGACTTGAGCATGACCTaGATGTCCTGGAGCACCTCCTCCCCAGAAGGCCGG +
Preference number: 6 (lower is better)
Translates to: MLEGLASDLSMT*MSWSTSSPEGR
Trigger: CCGGCCTTCTGGGGAGGAGGTGCTCCAGGACATCCAGGTCATGCTCAAGTCGGACGCCAGCCCTTCCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000416905.1
CDS CCA 72 bp GCAATGTTGGTGAGGGTGTTGCGGCAGCTGCGGCACTaGATAGAGATGCGGGTGGCCTTGGCACGGACCGCA +
Preference number: 6 (lower is better)
Translates to: AMLVRVLRQLRH*IEMRVALARTA
Trigger: TGCGGTCCGTGCCAAGGCCACCCGCATCTCTATCCAGTGCCGCAGCTGCCGCAACACCCTCACCAACATTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000444778.1
CDS CCA 72 bp TGGATGGCGTGCTCCGGGTATTTCTGTGGGAGCACATaGCTGGCTAACGGCACGTGCTGCCCGAGGGGACTC +
Preference number: 6 (lower is better)
Translates to: WMACSGYFCGST*LANGTCCPRGL
Trigger: GAGTCCCCTCGGGCAGCACGTGCCGTTAGCCAGCCATGTGCTCCCACAGAAATACCCGGAGCACGCCATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp TCGAGGCCAGGGCGCATGGCAATGTTGGTGAGGGTGTaGCGGCAGCTGCGGCACTGGATAGAGATGCGGGTG +
Preference number: 6 (lower is better)
Translates to: SRPGRMAMLVRV*RQLRHWIEMRV
Trigger: CACCCGCATCTCTATCCAGTGCCGCAGCTGCCGCAACACCCTCACCAACATTGCCATGCGCCCTGGCCTCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
ENST00000444778.1
CDS CAA 72 bp TGGATCTCGCCGCGCCGCAGCATGAGCTGCAGCACCTaGTGGATGGCGTGCTCCGGGTATTTCTGTGGGAGC +
Preference number: 6 (lower is better)
Translates to: WISPRRSMSCST*WMACSGYFCGS
Trigger: GCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 90 bp ATGCGATGCTGGATCTCGCCGCGCCGCAGCATGAGCTGCAGCACCTaGTGGATGGCGTGCTCCGGGTATTTCTGTGGGAGCACATGGCTG +
Preference number: 6 (lower is better)
Translates to: MRCWISPRRSMSCST*WMACSGYFCGSTWL
Trigger: CAGCCATGTGCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp CTGCCTCTGTGGCGAAGGGCTGCAGCTTCATCTTGCTaGGGGCTTCCGCGATGCGCACAATGGCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: LPLWRRAAASSC*GLPRCAQWPPA
Trigger: AGCTGGAGGCCATTGTGCGCATCGCGGAAGCCCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS TCA 72 bp CTCCTGGGGAAACTGACACTTAGCGCTGCCTCCACCTaGGCAGCTCTTCCCCCAAGGAGCCACACTGTCCCC +
Preference number: 6 (lower is better)
Translates to: LLGKLTLSAAST*AALPPRSHTVP
Trigger: GGGGACAGTGTGGCTCCTTGGGGGAAGAGCTGCTCAGGTGGAGGCAGCGCTAAGTGTCAGTTTCCCCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp GACACCTGGGAGCCAATGGCAAAGCGGCGCTTGAGCTaGTTCTCGATGCGGCTCAGCATCTCCTGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: DTWEPMAKRRLS*FSMRLSISWSS
Trigger: GGAGGACCAGGAGATGCTGAGCCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCATTGGCTCCCAGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 72 bp ATGCGATGCTGGATCTCGCCGCGCCGCAGCATGAGCTaGAGCACCTTGTGGATGGCGTGCTCCGGGTATTTC +
Preference number: 6 (lower is better)
Translates to: MRCWISPRRSMS*STLWMACSGYF
Trigger: GAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 72 bp CATGCCCAGGACACGCAGGGTCCACTGCAGCATTTTTaGCACAGGCACCACATGCTGAGCTGGCTCCAGCCC +
Preference number: 6 (lower is better)
Translates to: HAQDTQGPLQHF*HRHHMLSWLQP
Trigger: GGGCTGGAGCCAGCTCAGCATGTGGTGCCTGTGGCAAAAATGCTGCAGTGGACCCTGCGTGTCCTGGGCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp CGCCGCAGCATGAGCTGCAGCACCTTGTGGATGGCGTaGTCCGGGTATTTCTGTGGGAGCACATGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: RRSMSCSTLWMA*SGYFCGSTWLA
Trigger: AGCCAGCCATGTGCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp CCCCTGACAGGGTACCGGACAAGGCAGCATCCAACGTaGACACTTGGAAGAGCCGCAGGGCCTCCTCCACAT +
Preference number: 6 (lower is better)
Translates to: PLTGYRTRQHPT*TLGRAAGPPPH
Trigger: ATGTGGAGGAGGCCCTGCGGCTCTTCCAAGTGTCCACGTTGGATGCTGCCTTGTCCGGTACCCTGTCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS CCA 72 bp ATCTCGCCGCGCCGCAGCATGAGCTGCAGCACCTTGTaGATGGCGTGCTCCGGGTATTTCTGTGGGAGCACA +
Preference number: 6 (lower is better)
Translates to: ISPRRSMSCSTL*MACSGYFCGST
Trigger: TGTGCTCCCACAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp TGGATCTCGCCGCGCCGCAGCATGAGCTGCAGCACCTaGTGGATGGCGTGCTCCGGGTATTTCTGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: WISPRRSMSCST*WMACSGYFCLV
Trigger: CACCAAGCAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS CAA 90 bp TCTTCCCCCAAGGAGCCACACTGTCCCCTTCATGCAGCTCCCTGCTaGGCATCACCTCCTTGCAGAGGCCATGCCCACTCACTCCATGGG +
Preference number: 6 (lower is better)
Translates to: SSPKEPHCPLHAAPC*ASPPCRGHAHSLHG
Trigger: CCCATGGAGTGAGTGGGCATGGCCTCTGCAAGGAGGTGATGCCAAGCAGGGAGCTGCATGAAGGGGACAGTGTGGCTCCTTGGGGGAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp GCTCAGACACCTGGGAGCCAATGGCAAAGCGGCGCTTaGGCTGCTTCTCGATGCGGCTCAGCATCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: AQTPGSQWQSGA*AASRCGSASPG
Trigger: ACCAGGAGATGCTGAGCCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCATTGGCTCCCAGGTGTCTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS TCA 72 bp CGAGTCCATGAGTCCAGTGAGGCGGCGCGACTCACTTaGGGCGGTAGAGAACCTTGCGCTGCATGCGATGCT +
Preference number: 6 (lower is better)
Translates to: RVHESSEAARLT*GGREPCAACDA
Trigger: AGCATCGCATGCAGCGCAAGGTTCTCTACCGCCTCAAGTGAGTCGCGCCGCCTCACTGGACTCATGGACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS TCA 72 bp GGCCGCGATGATGATGCCAGGGATCTTCACCAGGTGTaGCATCATGTCCGACAGCTGCAGGTGCTCGGCTGG +
Preference number: 6 (lower is better)
Translates to: GRDDDARDLHQV*HHVRQLQVLGW
Trigger: CCAGCCGAGCACCTGCAGCTGTCGGACATGATGTCACACCTGGTGAAGATCCCTGGCATCATCATCGCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000382011.9
CDS TCA 72 bp GCCCACAGAGCTCCGAGCCAGGGAACCCAGATCAATTaGGACCATGGCCCCTGCATCTGCTCACCTGACAGG +
Preference number: 6 (lower is better)
Translates to: AHRAPSQGTQIN*DHGPCICSPDR
Trigger: CCTGTCAGGTGAGCAGATGCAGGGGCCATGGTCTCAATTGATCTGGGTTCCCTGGCTCGGAGCTCTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp AGGGCACCGAGTGTGCCAGGGTGGTGCAGGCCTGATTaGGGAGACAGGATATGGCACATGTGGGGACACTCC +
Preference number: 6 (lower is better)
Translates to: RAPSVPGWCRPD*GDRIWHMWGHS
Trigger: GGAGTGTCCCCACATGTGCCATATCCTGTCTCCTCAATCAGGCCTGCACCACCCTGGCACACTCGGTGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp AAGCTCACTCTCATGGCTCTGCCCCTTCCCACTCCATaGAACGCCCGCCAACGGGGAAAGGCACAGACGGGA +
Preference number: 6 (lower is better)
Translates to: KLTLMALPLPTP*NARQRGKAQTG
Trigger: TCCCGTCTGTGCCTTTCCCCGTTGGCGGGCGTTTCATGGAGTGGGAAGGGGCAGAGCCATGAGAGTGAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp GGCATCTCCCCGTGGGGGACTGCATCAGGCAGCTCCTaGAGCTTCAGGGTCTGGAAGTCCACGCATTTGCAT +
Preference number: 6 (lower is better)
Translates to: GISPWGTASGSS*SFRVWKSTHLH
Trigger: ATGCAAATGCGTGGACTTCCAGACCCTGAAGCTGCAGGAGCTGCCTGATGCAGTCCCCCACGGGGAGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS GCA 72 bp CAGAGAACGGCCTCTCTCCCCACGTCACTCAGCCCATaGTCAGCTGCTTGGAGGATGGTGTTGCCCACAGTG +
Preference number: 6 (lower is better)
Translates to: QRTASLPTSLSP*SAAWRMVLPTV
Trigger: CACTGTGGGCAACACCATCCTCCAAGCAGCTGAGCATGGGCTGAGTGACGTGGGGAGAGAGGCCGTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp CAGCTCTTCCCCCAAGGAGCCACACTGTCCCCTTCATaGAGCTCCCTGCTTGGCATCACCTCCTTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: QLFPQGATLSPS*SSLLGITSLQR
Trigger: CCTCTGCAAGGAGGTGATGCCAAGCAGGGAGCTGCATGAAGGGGACAGTGTGGCTCCTTGGGGGAAGAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp TATTTCTGTGGGAGCACATGGCTGGCTAACGGCACGTaGTGCCCGAGGGGACTCCGACAGAGCCCAGACATC +
Preference number: 6 (lower is better)
Translates to: YFCGSTWLANGT*CPRGLRQSPDI
Trigger: GATGTCTGGGCTCTGTCGGAGTCCCCTCGGGCAGCACGTGCCGTTAGCCAGCCATGTGCTCCCACAGAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp CACACAGGTACCTGTCGCAGTAGAGCTGCATGTGTCTaGGCATCTCCCCGTGGGGGACTGCATCAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: HTGTCRSRAACV*ASPRGGLHQAA
Trigger: AGCTGCCTGATGCAGTCCCCCACGGGGAGATGCCCAGACACATGCAGCTCTACTGCGACAGGTACCTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS CCA 72 bp GGGGGCGATGCTCTTGGAGATGACCTCATAGACATTTaGGAGGGCAGCCAGGCGACGGAACTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GGDALGDDLIDI*EGSQATELLLL
Trigger: GAGGAGGAGGAGTTCCGTCGCCTGGCTGCCCTCCCAAATGTCTATGAGGTCATCTCCAAGAGCATCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS CCA 72 bp CACCTGACAGGGTACCGGACAAGGCAGCATCCAACGTaGACACTTGGAAGAGCCGCAGGGCCTCCTCCACAT +
Preference number: 6 (lower is better)
Translates to: HLTGYRTRQHPT*TLGRAAGPPPH
Trigger: ATGTGGAGGAGGCCCTGCGGCTCTTCCAAGTGTCCACGTTGGATGCTGCCTTGTCCGGTACCCTGTCAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp ACATCTGCCTCTGTGGCGAAGGGCTGCAGCTTCATCTaGCTGAGGGCTTCCGCGATGCGCACAATGGCCTCC +
Preference number: 6 (lower is better)
Translates to: TSASVAKGCSFI*LRASAMRTMAS
Trigger: GGAGGCCATTGTGCGCATCGCGGAAGCCCTCAGCAAGATGAAGCTGCAGCCCTTCGCCACAGAGGCAGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS CAA 72 bp TGCTCAGACACCTGGGAGCCAATGGCAAAGCGGCGCTaGAGCTGCTTCTCGATGCGGCTCAGCATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: CSDTWEPMAKRR*SCFSMRLSISW
Trigger: CCAGGAGATGCTGAGCCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS CAA 72 bp GCCTGGCACACAGGTGGGCAATATCAGCTGCTGTATTaGAAGGTGAAGCCCGTGCGGTCGGTGCCCACTCGG +
Preference number: 6 (lower is better)
Translates to: AWHTGGQYQLLY*KVKPVRSVPTR
Trigger: CCGAGTGGGCACCGACCGCACGGGCTTCACCTTCAAATACAGCAGCTGATATTGCCCACCTGTGTGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS CAA 72 bp GCCAGAGTGTCACTAGGGACCAAGTCCTGCGGGCCCTaGGAGGCCACAGCAGGACTCCTTTTGTTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: ARVSLGTKSCGP*EATAGLLLLLE
Trigger: CTCCAGCAACAAAAGGAGTCCTGCTGTGGCCTCCAAGGGCCCGCAGGACTTGGTCCCTAGTGACACTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 90 bp ATGATGCTGTGCTCAGACACCTGGGAGCCAATGGCAAAGCGGCGCTaGAGCTGCTTCTCGATGCGGCTCAGCATCTCCTGGTCCTCCTGG +
Preference number: 6 (lower is better)
Translates to: MMLCSDTWEPMAKRR*SCFSMRLSISWSSW
Trigger: CCAGGAGGACCAGGAGATGCTGAGCCGCATCGAGAAGCAGCTCAAGCGCCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCACAGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS CAA 90 bp ATGCGATGCTGGATCTCGCCGCGCCGCAGCATGAGCTGCAGCACCTaGTGGATGGCGTGCTCCGGGTATTTCTGCTTGGTGAAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: MRCWISPRRSMSCST*WMACSGYFCLVKSL
Trigger: CAAGGACTTCACCAAGCAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCGCGGCGAGATCCAGCATCGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS TCA 72 bp TGCCCCCAAAGATGGAGGGGGCGATGCTCTTGGAGATaGCCTCATAGACATTTGGGAGGGCAGCCAGGCGAC +
Preference number: 6 (lower is better)
Translates to: CPQRWRGRCSWR*PHRHLGGQPGD
Trigger: GTCGCCTGGCTGCCCTCCCAAATGTCTATGAGGTCATCTCCAAGAGCATCGCCCCCTCCATCTTTGGGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS TCA 72 bp GATGTAGCGGTTCTTCAGTTTCTCTGCAGCCTCTGCTaGCAGCCGGGGGCCACACTTCACTCGGCAGTAGGC +
Preference number: 6 (lower is better)
Translates to: DVAVLQFLCSLC*QPGATLHSAVG
Trigger: GCCTACTGCCGAGTGAAGTGTGGCCCCCGGCTGTCAGCAGAGGCTGCAGAGAAACTGAAGAACCGCTACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS TCA 72 bp AGGGGCCAGGAGACTTGCATTCCAGCCAAGCGACTGTaGTCTTGGGCACCAGGGAAAGGCCCCTTCGAGTGT +
Preference number: 6 (lower is better)
Translates to: RGQETCIPAKRL*SWAPGKGPFEC
Trigger: ACACTCGAAGGGGCCTTTCCCTGGTGCCCAAGATCACAGTCGCTTGGCTGGAATGCAAGTCTCCTGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp CCCTCATCACCGAGGCTGTCAGTCCAGCTGCGCTGCTaGCTTTCCCAGACGTGTATACCCCAATGGGAGAAC +
Preference number: 6 (lower is better)
Translates to: PSSPRLSVQLRC*LSQTCIPQWEN
Trigger: GTTCTCCCATTGGGGTATACACGTCTGGGAAAGGCAGCAGCGCAGCTGGACTGACAGCCTCGGTGATGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS GCA 72 bp GCCCTCTGTGCCTGCAGCATCCCAGAGGCCTCCACCTaGAATGTCTCATGTGACAGCAAGTGTCTCCAGGGT +
Preference number: 6 (lower is better)
Translates to: ALCACSIPEAST*NVSCDSKCLQG
Trigger: ACCCTGGAGACACTTGCTGTCACATGAGACATTGCAGGTGGAGGCCTCTGGGATGCTGCAGGCACAGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp AGAGACATGGCCAGAGTGTCACTAGGGACCAAGTCCTaGGGGCCCTTGGAGGCCACAGCAGGACTCCTTTTG +
Preference number: 6 (lower is better)
Translates to: RDMARVSLGTKS*GPLEATAGLLL
Trigger: CAAAAGGAGTCCTGCTGTGGCCTCCAAGGGCCCGCAGGACTTGGTCCCTAGTGACACTCTGGCCATGTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp TGCCGGCTCACACCCCCACTCCAAGGCAGGCTCACCTaGTTGGTGAAGTCCTTGATGATGCTGTGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: CRLTPPLQGRLT*LVKSLMMLCSD
Trigger: GTCTGAGCACAGCATCATCAAGGACTTCACCAAGCAGGTGAGCCTGCCTTGGAGTGGGGGTGTGAGCCGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp GACTTGGCTGTCCCAGGGTCCCCTAGCATCAGCAGGTaGATGTCTCCTCGGCGAGTAAGTCCATCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: DLAVPGSPSISR*MSPRRVSPSGS
Trigger: GCTCCCTGATGGACTTACTCGCCGAGGAGACATCAACCTGCTGATGCTAGGGGACCCTGGGACAGCCAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS CAA 72 bp CGGCTCACACCCCCACTCCAAGGCAGGCTCACCTGCTaGGTGAAGTCCTTGATGATGCTGTGCTCAGACACC +
Preference number: 6 (lower is better)
Translates to: RLTPPLQGRLTC*VKSLMMLCSDT
Trigger: GGTGTCTGAGCACAGCATCATCAAGGACTTCACCAAGCAGGTGAGCCTGCCTTGGAGTGGGGGTGTGAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 90 bp AGAAGCTGGGACTTGGCTGTCCCAGGGTCCCCTAGCATCAGCAGGTaGATGTCTCCTCGGCGAGTAAGTCCATCAGGGAGCCTCTTTCGG +
Preference number: 6 (lower is better)
Translates to: RSWDLAVPGSPSISR*MSPRRVSPSGSLFR
Trigger: CCGAAAGAGGCTCCCTGATGGACTTACTCGCCGAGGAGACATCAACCTGCTGATGCTAGGGGACCCTGGGACAGCCAAGTCCCAGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS CAA 90 bp CTCACACCCCCACTCCAAGGCAGGCTCACCTGCTTGGTGAAGTCCTaGATGATGCTGTGCTCAGACACCTGGGAGCCAATGGCAAAGCGG +
Preference number: 6 (lower is better)
Translates to: LTPPLQGRLTCLVKS*MMLCSDTWEPMAKR
Trigger: CCGCTTTGCCATTGGCTCCCAGGTGTCTGAGCACAGCATCATCAAGGACTTCACCAAGCAGGTGAGCCTGCCTTGGAGTGGGGGTGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp GTCTCATGTGACAGCAAGTGTCTCCAGGGTAGAGGCTaGGTCTTCACCAAGGGGGACAGGAGGAACAGGCCC +
Preference number: 6 (lower is better)
Translates to: VSCDSKCLQGRG*VFTKGDRRNRP
Trigger: GGGCCTGTTCCTCCTGTCCCCCTTGGTGAAGACTCAGCCTCTACCCTGGAGACACTTGCTGTCACATGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp CCCAGGCTCACGGGGAACTTTGTACTCAGGCTCCTTTaGCCTAAAGGGCCCACACTTCCTGAGTGCCCACTG +
Preference number: 6 (lower is better)
Translates to: PRLTGNFVLRLL*PKGPTLPECPL
Trigger: CAGTGGGCACTCAGGAAGTGTGGGCCCTTTAGGTCAAAGGAGCCTGAGTACAAAGTTCCCCGTGAGCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp CGCCGCAGCATGAGCTGCAGCACCTTGTGGATGGCGTaGTCCGGGTATTTCTGCTTGGTGAAGTCCTTGATG +
Preference number: 6 (lower is better)
Translates to: RRSMSCSTLWMA*SGYFCLVKSLM
Trigger: CATCAAGGACTTCACCAAGCAGAAATACCCGGAGCACGCCATCCACAAGGTGCTGCAGCTCATGCTGCGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS GCA 72 bp TTCATCCCTAGAAGCAGGAGCCAGGTCCAGCTTCAGTaGTGCAGCCCAGCACCCAGAACAGTATCTGGCAGG +
Preference number: 6 (lower is better)
Translates to: FIPRSRSQVQLQ*CSPAPRTVSGR
Trigger: CCTGCCAGATACTGTTCTGGGTGCTGGGCTGCAGCACTGAAGCTGGACCTGGCTCCTGCTTCTAGGGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416905.1
CDS CCA 72 bp AGGCCCCTTCGAGTGTCAGCTGTCTCATTTCTAACATaGGCAGGACTGACTGCTCACCTGGCTTCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: RPLRVSAVSFLT*AGLTAHLASRG
Trigger: CCCCCTGGAAGCCAGGTGAGCAGTCAGTCCTGCCCATGTTAGAAATGAGACAGCTGACACTCGAAGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp TCGAAGCGCGACAAGATGGTGGGCATGAAGTCAATGTaGTCCTCCCCCTTCGTCTCATCCCAGCGGCCGAAC +
Preference number: 6 (lower is better)
Translates to: SKRDKMVGMKSM*SSPFVSSQRPN
Trigger: GTTCGGCCGCTGGGATGAGACGAAGGGGGAGGACAACATTGACTTCATGCCCACCATCTTGTCGCGCTTCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS CAA 72 bp CCAGGAGACTTGCATTCCAGCCAAGCGACTGTGATCTaGGGCACCAGGGAAAGGCCCCTTCGAGTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: PGDLHSSQATVI*GTRERPLRVSA
Trigger: AGCTGACACTCGAAGGGGCCTTTCCCTGGTGCCCAAGATCACAGTCGCTTGGCTGGAATGCAAGTCTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 90 bp AGAGACATGGCCAGAGTGTCACTAGGGACCAAGTCCTGCGGGCCCTaGGAGGCCACAGCAGGACTCCTTTTGTTGCTGGAGCAGATAGAT +
Preference number: 6 (lower is better)
Translates to: RDMARVSLGTKSCGP*EATAGLLLLLEQID
Trigger: ATCTATCTGCTCCAGCAACAAAAGGAGTCCTGCTGTGGCCTCCAAGGGCCCGCAGGACTTGGTCCCTAGTGACACTCTGGCCATGTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp GATCAATTGAGACCATGGCCCCTGCATCTGCTCACCTaGCAGGGTACCGGACAAGGCAGCATCCAACGTGGA +
Preference number: 6 (lower is better)
Translates to: DQLRPWPLHLLT*QGTGQGSIQRG
Trigger: TCCACGTTGGATGCTGCCTTGTCCGGTACCCTGTCAGGTGAGCAGATGCAGGGGCCATGGTCTCAATTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp CAAAGAGCAGGCAGGCAATGGCCTTCTTCATGTCTGTaGCCCCAAAGATGGAGGGGGCGATGCTCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: QRAGRQWPSSCL*PQRWRGRCSWR
Trigger: TCTCCAAGAGCATCGCCCCCTCCATCTTTGGGGGCACAGACATGAAGAAGGCCATTGCCTGCCTGCTCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS GCA 72 bp GACCCAACTCAAATTATCACCACTCCATATCACCCCTaGCCTCTGTGCCTGCAGCATCCCAGAGGCCTCCAC +
Preference number: 6 (lower is better)
Translates to: DPTQIITTPYHP*PLCLQHPRGLH
Trigger: GTGGAGGCCTCTGGGATGCTGCAGGCACAGAGGGCAGGGGTGATATGGAGTGGTGATAATTTGAGTTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp GGGACTGCATCAGGCAGCTCCTGCAGCTTCAGGGTCTaGAAGTCCACGCATTTGCATTTGTCGGGCATGATG +
Preference number: 6 (lower is better)
Translates to: GTASGSSCSFRV*KSTHLHLSGMM
Trigger: CATCATGCCCGACAAATGCAAATGCGTGGACTTCCAGACCCTGAAGCTGCAGGAGCTGCCTGATGCAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS CCA 72 bp AAAGGCACAGACGGGAAGGGCTGCGGGGAACTTGTATaGGGTTTCACCAGAATCCAACCACCTCTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: KGTDGKGCGELV*GFTRIQPPLLS
Trigger: GGAGAGCAGAGGTGGTTGGATTCTGGTGAAACCCCATACAAGTTCCCCGCAGCCCTTCCCGTCTGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp CCACTCCAAGGCAGGCTCACCTGCTTGGTGAAGTCCTaGATGATGCTGTGCTCAGACACCTGGGAGCCAATG +
Preference number: 6 (lower is better)
Translates to: PLQGRLTCLVKS*MMLCSDTWEPM
Trigger: CATTGGCTCCCAGGTGTCTGAGCACAGCATCATCAAGGACTTCACCAAGCAGGTGAGCCTGCCTTGGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp GGCCGCGATGATGATGCCAGGGATCTTCACCAGGTGTaGCATCATGTCCGACTTCAGGCTACGAATGCTGGA +
Preference number: 6 (lower is better)
Translates to: GRDDDARDLHQV*HHVRLQATNAG
Trigger: TCCAGCATTCGTAGCCTGAAGTCGGACATGATGTCACACCTGGTGAAGATCCCTGGCATCATCATCGCGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000416905.1
ENST00000444778.1
CDS TCA 72 bp TTCAAATGCACCAAACCTGCTCCCTCCTGGGGAAACTaGCACTTAGCGCTGCCTCCACCTGAGCAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: FKCTKPAPSWGN*HLALPPPEQLF
Trigger: GAAGAGCTGCTCAGGTGGAGGCAGCGCTAAGTGTCAGTTTCCCCAGGAGGGAGCAGGTTTGGTGCATTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp GTCTGTGTCAGTGCGCTCACGTGCAGAGTGATGACATaGTTGGCCAGCATCACATCCCTCTCCTCATTGTGC +
Preference number: 6 (lower is better)
Translates to: VCVSALTCRVMT*LASITSLSSLC
Trigger: GCACAATGAGGAGAGGGATGTGATGCTGGCCAAGCATGTCATCACTCTGCACGTGAGCGCACTGACACAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 72 bp GTCAGCTGTCTCATTTCTAACATGGGCAGGACTGACTaGTCACCTGGCTTCCAGGGGGCAGCTGTAAGGCAA +
Preference number: 6 (lower is better)
Translates to: VSCLISNMGRTD*SPGFQGAAVRQ
Trigger: TTGCCTTACAGCTGCCCCCTGGAAGCCAGGTGAGCAGTCAGTCCTGCCCATGTTAGAAATGAGACAGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp ATTTTCCCCAGCGTAGGTAGCCTGGCTCATGATCGGTaGCTGGGACAGTCTGTTGAAAGGCTGACCGAAACC +
Preference number: 6 (lower is better)
Translates to: IFPSVGSLAHDR*LGQSVERLTET
Trigger: GGTTTCGGTCAGCCTTTCAACAGACTGTCCCAGGCACCGATCATGAGCCAGGCTACCTACGCTGGGGAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp ATCACCTCCTTGCAGAGGCCATGCCCACTCACTCCATaGGAAAGAGCACGTCCTCCTTTTCCAACACACCTG +
Preference number: 6 (lower is better)
Translates to: ITSLQRPCPLTP*ERARPPFPTHL
Trigger: CAGGTGTGTTGGAAAAGGAGGACGTGCTCTTTCCCATGGAGTGAGTGGGCATGGCCTCTGCAAGGAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp GGAGAACACTTCTCCACAAACTTCAGAAGCTGGGACTaGGCTGTCCCAGGGTCCCCTAGCATCAGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: GEHFSTNFRSWD*AVPGSPSISRL
Trigger: CAACCTGCTGATGCTAGGGGACCCTGGGACAGCCAAGTCCCAGCTTCTGAAGTTTGTGGAGAAGTGTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS CAA 72 bp AGCAGGTGCTCAATCAATGAAGGTGCAAGACTGTATTaGAAGGTGAAGCCCGTGCGGTCGGTGCCCACTCGG +
Preference number: 6 (lower is better)
Translates to: SRCSINEGARLY*KVKPVRSVPTR
Trigger: CCGAGTGGGCACCGACCGCACGGGCTTCACCTTCAAATACAGTCTTGCACCTTCATTGATTGAGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416905.1
CDS CAA 72 bp ATGCCCATGATGGTAACCCTGTTCCCAGGGACGACCTaGTCACACAGGTACTGTGTGGTGCCCTTTAGCCTC +
Preference number: 6 (lower is better)
Translates to: MPMMVTLFPGTT*SHRYCVVPFSL
Trigger: GAGGCTAAAGGGCACCACACAGTACCTGTGTGACAAGGTCGTCCCTGGGAACAGGGTTACCATCATGGGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464908.5
CDS CAA 72 bp GTTCAAGGGTCTGGAGAGAAGCTGCTTCTTCCCATCTaGGAGGAAACAGCGGTGGGGAGAAAGGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: VQGSGEKLLLPI*EETAVGRKEER
Trigger: CCTCTCCTCCTTTCTCCCCACCGCTGTTTCCTCCAAGATGGGAAGAAGCAGCTTCTCTCCAGACCCTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 90 bp ACCCCAATGGGAGAACACTTCTCCACAAACTTCAGAAGCTGGGACTaGGCTGTCCCAGGGTCCCCTAGCATCAGCAGGTTGATGTCTCCT +
Preference number: 6 (lower is better)
Translates to: TPMGEHFSTNFRSWD*AVPGSPSISRLMSP
Trigger: AGGAGACATCAACCTGCTGATGCTAGGGGACCCTGGGACAGCCAAGTCCCAGCTTCTGAAGTTTGTGGAGAAGTGTTCTCCCATTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000464908.5
ENST00000465557.1
ENST00000493076.5
ENST00000493569.5
CDS CAA 90 bp AAGATCATGTCGAAGCGCGACAAGATGGTGGGCATGAAGTCAATGTaGTCCTCCCCCTTCGTCTCATCCCAGCGGCCGAACACTGAGTTG +
Preference number: 6 (lower is better)
Translates to: KIMSKRDKMVGMKSM*SSPFVSSQRPNTEL
Trigger: CAACTCAGTGTTCGGCCGCTGGGATGAGACGAAGGGGGAGGACAACATTGACTTCATGCCCACCATCTTGTCGCGCTTCGACATGATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS TCA 72 bp GAGAATGAGAACCCAGGAGGGCCGGGACCCTGTGATTaGTTGCTCTTATACTCCCAGCACCTAGAACAGTGC +
Preference number: 6 (lower is better)
Translates to: ENENPGGPGPCD*LLLYSQHLEQC
Trigger: GCACTGTTCTAGGTGCTGGGAGTATAAGAGCAATCAATCACAGGGTCCCGGCCCTCCTGGGTTCTCATTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp TTTGCATTTGTCGGGCATGATGAAGTACGGGTCCAATaGGCATTTGGGGCGCCCAGCCTGATCTGTGTTGCA +
Preference number: 6 (lower is better)
Translates to: FAFVGHDEVRVQ*AFGAPSLICVA
Trigger: TGCAACACAGATCAGGCTGGGCGCCCCAAATGCCCATTGGACCCGTACTTCATCATGCCCGACAAATGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS CCA 72 bp CTGACTCTCGCTGAACTCGCTAACTCATTTGTACGCTaGTTTAGGAGGCTTAGTGCCAGCCCACAGAGCCCT +
Preference number: 6 (lower is better)
Translates to: LTLAELANSFVR*FRRLSASPQSP
Trigger: AGGGCTCTGTGGGCTGGCACTAAGCCTCCTAAACCAGCGTACAAATGAGTTAGCGAGTTCAGCGAGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp GAAACCAGACAGTATGGCTTATGGTGTGGAAAACGCTaGCCTAGGGGCCAGGAGACTTGCATTCCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: ETRQYGLWCGKR*PRGQETCIPAK
Trigger: CTTGGCTGGAATGCAAGTCTCCTGGCCCCTAGGCCAGCGTTTTCCACACCATAAGCCATACTGTCTGGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp GTTGAAAGGCTGACCGAAACCAGACAGTATGGCTTATaGTGTGGAAAACGCTGGCCTAGGGGCCAGGAGACT +
Preference number: 6 (lower is better)
Translates to: VERLTETRQYGL*CGKRWPRGQET
Trigger: AGTCTCCTGGCCCCTAGGCCAGCGTTTTCCACACCATAAGCCATACTGTCTGGTTTCGGTCAGCCTTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp CATGGGAAAGAGCACGTCCTCCTTTTCCAACACACCTaGCCCTGCCATCATCTCCCTCACTGCCTTTTTCAC +
Preference number: 6 (lower is better)
Translates to: HGKEHVLLFQHT*PCHHLPHCLFH
Trigger: GTGAAAAAGGCAGTGAGGGAGATGATGGCAGGGCCAGGTGTGTTGGAAAAGGAGGACGTGCTCTTTCCCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp GCCACAGAGGCCTTGGTGTTTCAGCTAAGGAGATGGTaGGCTCATGGTCAAGAAGTCATTGAGAGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: ATEALVFQLRRW*AHGQEVIERGV
Trigger: GACTCCCCTCTCAATGACTTCTTGACCATGAGCCCACCATCTCCTTAGCTGAAACACCAAGGCCTCTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp ATGGCGTGCTCCGGGTATTTCTGCTTGGTGAAGTCCTaGATGATGCTGTGCTCAGACACCTGGGAGCCAATG +
Preference number: 6 (lower is better)
Translates to: MACSGYFCLVKS*MMLCSDTWEPM
Trigger: CATTGGCTCCCAGGTGTCTGAGCACAGCATCATCAAGGACTTCACCAAGCAGAAATACCCGGAGCACGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000216122.9
ENST00000382011.9
CDS CAA 72 bp GGAATGATGGCTAGAAAAGGTCTGAGAAAGGGACAGTaGTCCATCCTACCCCCGTTCAGGGCCTGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: GMMARKGLRKGQ*SILPPFRACLL
Trigger: CAGCAGACAGGCCCTGAACGGGGGTAGGATGGACAACTGTCCCTTTCTCAGACCTTTTCTAGCCATCATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp CACAGTGACAGCCAAACAGAAAGGCAGGTGGTGGCCTaGCTCTCGCTGAACTCGCTAACTCATTTGTACGCT +
Preference number: 6 (lower is better)
Translates to: HSDSQTERQVVA*LSLNSLTHLYA
Trigger: AGCGTACAAATGAGTTAGCGAGTTCAGCGAGAGTCAGGCCACCACCTGCCTTTCTGTTTGGCTGTCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp AGAAAAGCTGAGATTCTGACTTGGACAGCAAGTCTCTaGTTCCACCCATGCCCAGGACACGCAGGGTCCACT +
Preference number: 6 (lower is better)
Translates to: RKAEILTWTASL*FHPCPGHAGST
Trigger: AGTGGACCCTGCGTGTCCTGGGCATGGGTGGAATCAGAGACTTGCTGTCCAAGTCAGAATCTCAGCTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp GCTTGTACAAGTAGTCGGCCAGGTCCTCATCAAAGCTaGCCAGATCCTCCATCTCCACCTCAATCCAGTACT +
Preference number: 6 (lower is better)
Translates to: ACTSSRPGPHQS*PDPPSPPQSST
Trigger: AGTACTGGATTGAGGTGGAGATGGAGGATCTGGCCAGCTTTGATGAGGACCTGGCCGACTACTTGTACAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000416905.1
CDS CCA 72 bp ACTGCCACAGAGGCCTTGGTGTTTCAGCTAAGGAGATaGTGGGCTCATGGTCAAGAAGTCATTGAGAGGGGA +
Preference number: 6 (lower is better)
Translates to: TATEALVFQLRR*WAHGQEVIERG
Trigger: TCCCCTCTCAATGACTTCTTGACCATGAGCCCACCATCTCCTTAGCTGAAACACCAAGGCCTCTGTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CAA 72 bp TGCAGCTTCAGGGTCTGGAAGTCCACGCATTTGCATTaGTCGGGCATGATGAAGTACGGGTCCAATGGGCAT +
Preference number: 6 (lower is better)
Translates to: CSFRVWKSTHLH*SGMMKYGSNGH
Trigger: ATGCCCATTGGACCCGTACTTCATCATGCCCGACAAATGCAAATGCGTGGACTTCCAGACCCTGAAGCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS CAA 72 bp AGCTCCTGCAGCTTCAGGGTCTGGAAGTCCACGCATTaGCATTTGTCGGGCATGATGAAGTACGGGTCCAAT +
Preference number: 6 (lower is better)
Translates to: SSCSFRVWKSTH*HLSGMMKYGSN
Trigger: ATTGGACCCGTACTTCATCATGCCCGACAAATGCAAATGCGTGGACTTCCAGACCCTGAAGCTGCAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000444778.1
CDS CAA 90 bp ACATGCTTGGCCAGCATCACATCCCTCTCCTCATTGTGCTCATCCTaGACGATGAAGATCATGTCGAAGCGCGACAAGATGGTGGGCATG +
Preference number: 6 (lower is better)
Translates to: TCLASITSLSSLCSS*TMKIMSKRDKMVGM
Trigger: CATGCCCACCATCTTGTCGCGCTTCGACATGATCTTCATCGTCAAGGATGAGCACAATGAGGAGAGGGATGTGATGCTGGCCAAGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS CAA 90 bp CCTAGGGAAGGAATGATGGCTAGAAAAGGTCTGAGAAAGGGACAGTaGTCCATCCTACCCCCGTTCAGGGCCTGTCTGCTGAGTAAGATG +
Preference number: 6 (lower is better)
Translates to: PREGMMARKGLRKGQ*SILPPFRACLLSKM
Trigger: CATCTTACTCAGCAGACAGGCCCTGAACGGGGGTAGGATGGACAACTGTCCCTTTCTCAGACCTTTTCTAGCCATCATTCCTTCCCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp CTCATGATCGGTGCCTGGGACAGTCTGTTGAAAGGCTaGCCGAAACCAGACAGTATGGCTTATGGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: LMIGAWDSLLKG*PKPDSMAYGVE
Trigger: TTCCACACCATAAGCCATACTGTCTGGTTTCGGTCAGCCTTTCAACAGACTGTCCCAGGCACCGATCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp ACATGCTTGGCCAGCATCACATCCCTCTCCTCATTGTaGTCATCCTTGACGATGAAGATCATGTCGAAGCGC +
Preference number: 6 (lower is better)
Translates to: TCLASITSLSSL*SSLTMKIMSKR
Trigger: GCGCTTCGACATGATCTTCATCGTCAAGGATGAGCACAATGAGGAGAGGGATGTGATGCTGGCCAAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000216122.9
ENST00000382011.9
ENST00000493076.5
CDS GCA 72 bp GCCCAGCACCCAGAACAGTATCTGGCAGGCAGCAGGTaGTCAATCAATGAAGGTGCAAGACTGTATTTGAAG +
Preference number: 6 (lower is better)
Translates to: AQHPEQYLAGSR*SINEGARLYLK
Trigger: CTTCAAATACAGTCTTGCACCTTCATTGATTGAGCACCTGCTGCCTGCCAGATACTGTTCTGGGTGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416905.1
CDS GCA 72 bp GGACAAGAAGCACGTCTTTTCATCTTTGTAGCGCAGTaGCTGGCACACAGGTGGGCAATATCAGCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: GQEARLFIFVAQ*LAHRWAISAAV
Trigger: TACAGCAGCTGATATTGCCCACCTGTGTGCCAGGCACTGCGCTACAAAGATGAAAAGACGTGCTTCTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS GCA 72 bp AAAGAGCACGTCCTCCTTTTCCAACACACCTGGCCCTaGCATCATCTCCCTCACTGCCTTTTTCACTACCTA +
Preference number: 6 (lower is better)
Translates to: KEHVLLFQHTWP*HHLPHCLFHYL
Trigger: TAGGTAGTGAAAAAGGCAGTGAGGGAGATGATGGCAGGGCCAGGTGTGTTGGAAAAGGAGGACGTGCTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS CCA 72 bp CTTTTCATCTTTGTAGCGCAGTGCCTGGCACACAGGTaGGCAATATCAGCTGCTGTATTTGAAGGTGAAGCC +
Preference number: 6 (lower is better)
Translates to: LFIFVAQCLAHR*AISAAVFEGEA
Trigger: GGCTTCACCTTCAAATACAGCAGCTGATATTGCCCACCTGTGTGCCAGGCACTGCGCTACAAAGATGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451351.5
CDS TCA 72 bp CTGTTGTTCCTAGCCAGTGAGAAGGGTTATCATCAATaGCCTGGGTCAAGAGGATTGTGTTCAAGGGTCTGG +
Preference number: 6 (lower is better)
Translates to: LLFLASEKGYHQ*PGSRGLCSRVW
Trigger: CCAGACCCTTGAACACAATCCTCTTGACCCAGGTCATTGATGATAACCCTTCTCACTGGCTAGGAACAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS TCA 72 bp CTAGGAAGCAGAGCATCAACTGTTGTTCCTAGCCAGTaGGAAGGGTTATCATCAATGACCTGGGTCAAGAGG +
Preference number: 6 (lower is better)
Translates to: LGSRASTVVPSQ*EGLSSMTWVKR
Trigger: CCTCTTGACCCAGGTCATTGATGATAACCCTTCTCACTGGCTAGGAACAACAGTTGATGCTCTGCTTCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493076.5
CDS GCA 72 bp AGAAGCTACAGATCCGCTCTCCTCAGAACATCTGCATaGAATTTCAGGATATGCAAGCCCAGGTTAGAACCC +
Preference number: 6 (lower is better)
Translates to: RSYRSALLRTSA*NFRICKPRLEP
Trigger: GGGTTCTAACCTGGGCTTGCATATCCTGAAATTGCATGCAGATGTTCTGAGGAGAGCGGATCTGTAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417343.1
CDS GCA 72 bp TTCCAACACACCTGGCCCTGCCATCATCTCCCTCACTaGCTTTTTCACTACCTACACTACCTGCATTTGTTT +
Preference number: 6 (lower is better)
Translates to: FQHTWPCHHLPH*LFHYLHYLHLF
Trigger: AAACAAATGCAGGTAGTGTAGGTAGTGAAAAAGGCAGTGAGGGAGATGATGGCAGGGCCAGGTGTGTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493076.5