RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000073111

Ensembl transcript IDs: ENST00000265056.12, ENST00000468414.1, ENST00000468659.1, ENST00000472731.1, ENST00000473785.1, ENST00000474964.5, ENST00000477668.5, ENST00000480910.1, ENST00000491422.1

Found 862 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGACGTTGTGGCCGTGGCTGTCGACGTGAGTGCGCAGGAAGTTCTTaGAGCGGTGGTGGATCTCCAGCCGGGGGCCCGCCATGCTCACCC +
Preference number: 1 (lower is better)
Translates to: RRCGRGCRRECAGSS*SGGGSPAGGPPCSP
Trigger: GGGTGAGCATGGCGGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCACTCACGTCGACAGCCACGGCCACAACGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp CTGGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTaGAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTGGACTCTCCT +
Preference number: 1 (lower is better)
Translates to: LACSCPPDLRGEWRP*SGAAGQPPLCLDSP
Trigger: AGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp TCTCGTCTCCTGGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATaGCGTCCTTGGAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTG +
Preference number: 1 (lower is better)
Translates to: SRLLACSCPPDLRGE*RPWSGAAGQPPLCL
Trigger: CAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 90 bp AGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCTGTCCACCAGATCTaGGAGGAGAATGGCGTCCTTGGAGCGGGGCAGCCGGCCAGCCGC +
Preference number: 1 (lower is better)
Translates to: SQLYLVSWLAAVHQI*EENGVLGAGQPASR
Trigger: GCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGATAGAGCTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp GACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTaGCACTGTCGTGCCCTCTTCCACCACAGGGGCACAGAAACCTGC +
Preference number: 1 (lower is better)
Translates to: DSHPTPATEEPRTLR*HCRALFHHRGTETC
Trigger: GCAGGTTTCTGTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR GCA 90 bp CGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTaGGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACAGAAA +
Preference number: 1 (lower is better)
Translates to: RMTHIPPLRLRSPER*AGTVVPSSTTGAQK
Trigger: TTTCTGTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR CCA 90 bp GGGTGCCGCTGGACATACGCCGTGAGGCCCACAGCCGACGCCCCCTaGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATAC +
Preference number: 1 (lower is better)
Translates to: GCRWTYAVRPTADAP*PVVKMARLDTFSIY
Trigger: GTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCAGCGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp GTTGACCTCAAAGGGGCCGGCCGACTGGCACTCAGGACAGGAGCCTaGTTTCACCTCCTGGTTCTGGGACTGGCAGAAAGGACCCAGGAC +
Preference number: 1 (lower is better)
Translates to: VDLKGAGRLALRTGA*FHLLVLGLAERTQD
Trigger: GTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGGCTCCTGTCCTGAGTGCCAGTCGGCCGGCCCCTTTGAGGTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 90 bp TCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGTCGACGTaGGTGCGCAGGAAGTTCTTGAAGCGGTGGTGGATCTCCAGCCGG +
Preference number: 1 (lower is better)
Translates to: SLMRSLKTLWPWLST*VRRKFLKRWWISSR
Trigger: CCGGCTGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCACTCACGTCGACAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 90 bp CCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTaGTGCGGTCGTACTTGGGGTACATGGCCAGTACCACCTCCAGGG +
Preference number: 1 (lower is better)
Translates to: PPPEAGGRCGHGCGW*CGRTWGTWPVPPPG
Trigger: CCCTGGAGGTGGTACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 90 bp GGAGAATGGCGTCCTTGGAGCGGGGCAGCCGGCCAGCCGCCACTTTaGCTGGACTCTCCTGGATTCGGATACGCTGGTAGTTCTGATAGA +
Preference number: 1 (lower is better)
Translates to: GEWRPWSGAAGQPPL*LDSPGFGYAGSSDR
Trigger: TCTATCAGAACTACCAGCGTATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 90 bp TGGATGCGCGCGTGGGCCTCCGCCATGCGGATCATGGACTCGATGTaGCGCACCGTAATGGGGATGCTGCCTGTCGCCATAGATTCTTTC +
Preference number: 1 (lower is better)
Translates to: WMRAWASAMRIMDSM*RTVMGMLPVAIDSF
Trigger: GAAAGAATCTATGGCGACAGGCAGCATCCCCATTACGGTGCGGCACATCGAGTCCATGATCCGCATGGCGGAGGCCCACGCGCGCATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp CGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATGTaGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTACCACC +
Preference number: 1 (lower is better)
Translates to: RSSSTRGRWEMRTWM*LVMRSYLGYMASTT
Trigger: GGTGGTACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp AGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATaGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGT +
Preference number: 1 (lower is better)
Translates to: SERSSSTRGRWEMRT*MWLVMRSYLGYMAS
Trigger: ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp GGGCCGGCCGACTGGCACTCAGGACAGGAGCCTGGTTTCACCTCCTaGTTCTGGGACTGGCAGAAAGGACCCAGGACGAAATTGCACTTG +
Preference number: 1 (lower is better)
Translates to: GPADWHSGQEPGFTS*FWDWQKGPRTKLHL
Trigger: CAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGGCTCCTGTCCTGAGTGCCAGTCGGCCGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp AATGGCGTCCTTGGAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTaGACTCTCCTGGATTCGGATACGCTGGTAGTTCTGATAGATGGT +
Preference number: 1 (lower is better)
Translates to: NGVLGAGQPASRHFA*TLLDSDTLVVLIDG
Trigger: ACCATCTATCAGAACTACCAGCGTATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp GCCGACTGGCACTCAGGACAGGAGCCTGGTTTCACCTCCTGGTTCTaGGACTGGCAGAAAGGACCCAGGACGAAATTGCACTTGTTGCAG +
Preference number: 1 (lower is better)
Translates to: ADWHSGQEPGFTSWF*DWQKGPRTKLHLLQ
Trigger: CTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGGCTCCTGTCCTGAGTGCCAGTCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp TGGGGAAACAGACAGGGAGCAATGGCAGCTGATAACTGTGGCGAGTaGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGC +
Preference number: 1 (lower is better)
Translates to: WGNRQGAMAADNCGE*IIRMTHIPPLRLRS
Trigger: GCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACAGTTATCAGCTGCCATTGCTCCCTGTCTGTTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR TCA 90 bp GAAACTGCGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTaGTATCACCACGTACCTTGTGCTTGCCACCTGGGTTTTTGGGCT +
Preference number: 1 (lower is better)
Translates to: ETATSLCQGLRTRAR*YHHVPCACHLGFWA
Trigger: AGCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 90 bp GACTGGGTCCACGGTGTCCCTCACCACACACAGGATGTCAAAGCGTaGGATGATGGGCTCTGTGAGGTCCACGTTCTCAGAGAAAGTCAG +
Preference number: 1 (lower is better)
Translates to: DWVHGVPHHTQDVKA*DDGLCEVHVLRESQ
Trigger: CTGACTTTCTCTGAGAACGTGGACCTCACAGAGCCCATCATCTCACGCTTTGACATCCTGTGTGTGGTGAGGGACACCGTGGACCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR GCA 90 bp TGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTaGTCCATGGCCTCATGGATGCTGGTTCTGTCCTGGTCATTCATC +
Preference number: 1 (lower is better)
Translates to: CREVTMPAFEMEMLC*SMASWMLVLSWSFI
Trigger: GATGAATGACCAGGACAGAACCAGCATCCATGAGGCCATGGAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 90 bp GGTTTTTGGGCTCCCCTCCGAACAGGGCCAGAGCCAGGCCTCTCTTaGTGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGA +
Preference number: 1 (lower is better)
Translates to: GFWAPLRTGPEPGLS*CLHDHRWKEQCWQR
Trigger: TCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTGTTCGGAGGGGAGCCCAAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 90 bp TCAGGGACCTCAATAGTGTCCTGCTGGGCCCCAAAGCGGTTGCGCTaGTATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGC +
Preference number: 1 (lower is better)
Translates to: SGTSIVSCWAPKRLR*YVTCSATNCFSMKS
Trigger: GCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATATCAGCGCAACCGCTTTGGGGCCCAGCAGGACACTATTGAGGTCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp TGGCACTCAGGACAGGAGCCTGGTTTCACCTCCTGGTTCTGGGACTaGCAGAAAGGACCCAGGACGAAATTGCACTTGTTGCAGTTGTAC +
Preference number: 1 (lower is better)
Translates to: WHSGQEPGFTSWFWD*QKGPRTKLHLLQLY
Trigger: GTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGGCTCCTGTCCTGAGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp TCGGTCAGTTCCCCTACAGCAACCTTGTTGTCCTTCTTGGCCACGTaGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGCCATTGGCA +
Preference number: 1 (lower is better)
Translates to: SVSSPTATLLSFLAT*LARMTVAKTGKPLA
Trigger: TGCCAATGGCTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGAACTGACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 90 bp GTCGTGCCCTCTTCCACCACAGGGGCACAGAAACCTGCAGGAGACTaGAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGC +
Preference number: 1 (lower is better)
Translates to: VVPSSTTGAQKPAGD*KRLQTSSTSSLAKG
Trigger: GCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAGTCTCCTGCAGGTTTCTGTGCCCCTGTGGTGGAAGAGGGCACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR CCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTaGCAAGGCATCCCACCCAAAGGTGAGAAGCACAAAGCAGGCTTG +
Preference number: 1 (lower is better)
Translates to: STRRWQDVQQPSKTH*QGIPPKGEKHKAGL
Trigger: CAAGCCTGCTTTGTGCTTCTCACCTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR TCA 90 bp CTGCTTCAGTATGAAGAGCAACAGCTCATTGTTGTCACGCCGGAATaGAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCGCATGACGCT +
Preference number: 1 (lower is better)
Translates to: LLQYEEQQLIVVTPE*KVAGKSLAHAAHDA
Trigger: AGCGTCATGCGCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATGAGCTGTTGCTCTTCATACTGAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 90 bp GCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTaGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATC +
Preference number: 1 (lower is better)
Translates to: AALIQGTEWRQSTRR*QDVQQPSKTHWQGI
Trigger: GATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR GCA 90 bp GTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTaGGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTGATA +
Preference number: 1 (lower is better)
Translates to: VKMARLDTFSIYLRN*DFAVPGSPHKSTLI
Trigger: TATCAACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 90 bp TTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTaGCCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCAT +
Preference number: 1 (lower is better)
Translates to: FIKCSGFVSIKHRGH*PPQTRIPRNPYGWH
Trigger: ATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR GCA 90 bp GAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTaGAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATC +
Preference number: 1 (lower is better)
Translates to: ESQGILMDGIGPQNC*RIIFLFRSWLNLFI
Trigger: GATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 90 bp GTCGTGGCTGAACTTGTTCATCCTGAAGAGCTCACTGTCATAAAATaGAGAGAGGTTGTGGATGTTGATCTGACGAGCCTTATCCACCAA +
Preference number: 1 (lower is better)
Translates to: VVAELVHPEELTVIK*REVVDVDLTSLIHQ
Trigger: TTGGTGGATAAGGCTCGTCAGATCAACATCCACAACCTCTCTGCATTTTATGACAGTGAGCTCTTCAGGATGAACAAGTTCAGCCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp ATGGCGGGCTCAGCAGCGCTGCCATTGGCCAGCCCCTCCTCCTCCTaGTTGCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGG +
Preference number: 2 (lower is better)
Translates to: MAGSAALPLASPSSS*LLGWCLTWLPTTKR
Trigger: CCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGGGCTGGCCAATGGCAGCGCTGCTGAGCCCGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp CCTGGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTaGGAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTGGACTCTCC +
Preference number: 2 (lower is better)
Translates to: PGLQLSTRSARRMAS*ERGSRPAATLPGLS
Trigger: GGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCACAGCCGACGCCCCCTaGCCAGTGGTGAAGATGGCT +
Preference number: 2 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVTADAP*PVVKMA
Trigger: AGCCATCTTCACCACTGGCCAGGGGGCGTCGGCTGT...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp CGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGTGGGCCTCCGCCACCCCCTGGCCAGTGGTaGAGATGGCTCGGCTGGACA +
Preference number: 2 (lower is better)
Translates to: RRLRSHSPADGCARGPPPPPGQW*RWLGWT
Trigger: TGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGG...TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACACAGCCGACGCCCCCTaGCCAGTGGTGAAGATGGCT +
Preference number: 2 (lower is better)
Translates to: VVSDVAAHHEAGQHLVLDTADAP*PVVKMA
Trigger: AGCCATCTTCACCACTGGCCAGGGGGCGTCGGCTGT...GTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR-3UTR GCA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGCCGGGGGCCCGCCATaGTCACCCACTCGCGCACAG +
Preference number: 2 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARAGGPP*SPTRAQ
Trigger: CTGTGCGCGAGTGGGTGAGCATGGCGGGCCCCCGGC...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGTTCTTGAAGCGGTGGTaGATCTCCAGCCGGGGGCCC +
Preference number: 2 (lower is better)
Translates to: PSSSLLLGWCLTWLPTTKFLKRW*ISSRGP
Trigger: GGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAA...CTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCATGGATGTGGTTGGTaGTGCGGTCGTACTTGGGGT +
Preference number: 2 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVHGCGW*CGRTWG
Trigger: ACCCCAAGTACGACCGCATCACCAACCACATCCATG...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp ACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCGCCTCATCAAAGATCTaGAGCAGCTCCGCCGGTGCC +
Preference number: 2 (lower is better)
Translates to: TTPLVRISWFRCSCLSERASSKI*SSSAGA
Trigger: GGCACCGGCGGAGCTGCTGCAGATCTTTGATGAGGC...GCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTTTCTTGAAGCGGTGGTaGATCTCCAGCCGGGGGCCC +
Preference number: 2 (lower is better)
Translates to: ASTTSRAASSKICSSSAGFLKRW*ISSRGP
Trigger: GGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAA...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTCTATCTCGTCTCCTaGCTTGCAGCTGTCCACCAG +
Preference number: 2 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVLYLVS*LAAVHQ
Trigger: CTGGTGGACAGCTGCAAGCCAGGAGACGAGATAGAG...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGCCACCTGGCGGCGCTTaGGGGCAGGGCGCTCCTCGT +
Preference number: 2 (lower is better)
Translates to: LSFLATWLARMTVAKTGKPPGGA*GQGAPR
Trigger: ACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGG...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCCAGCAGCTCCGCCGGTaGCTCAGGCAGGAAGTAGGC +
Preference number: 2 (lower is better)
Translates to: SLQGGDDASLRDGDALLLQQLRR*LRQEVG
Trigger: GCCTACTTCCTGCCTGAGGCACCGGCGGAGCTGCTG...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCCACTCGCGCACAGAGTaGCCTTTGAGATCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: GLQLSTRSARRMASLERGHSRTE*PLRSSR
Trigger: CCTGGAGGATCTCAAAGGCCACTCTGTGCGCGAGTG...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp ACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCAAGTTCTTGAAGCGGTaGTGGATCTCCAGCCGGGGG +
Preference number: 2 (lower is better)
Translates to: TTPLVRISWFRCSCLSERKFLKR*WISSRG
Trigger: CCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTT...GCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCATGCGGACATGGATGTaGTTGGTGATGCGGTCGTAC +
Preference number: 2 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVMRTWM*LVMRSY
Trigger: GTACGACCGCATCACCAACCACATCCATGTCCGCAT...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp GGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACTCTGATCCAAGGTACTaGGTGGAGACAAAGCACTCG +
Preference number: 2 (lower is better)
Translates to: GAQNAALALSCPLPPQGHSDPRY*VETKHS
Trigger: CGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGA...GTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR-3UTR TCA 90 bp CCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCATGGATGTGGTTGGTaGTGCGGTCGTACTTGGGGT +
Preference number: 2 (lower is better)
Translates to: PSSSLLLGWCLTWLPTTKHGCGW*CGRTWG
Trigger: ACCCCAAGTACGACCGCATCACCAACCACATCCATG...CTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACAGCAGCTCCGCCGGTaGCTCAGGCAGGAAGTAGGC +
Preference number: 2 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIQQLRR*LRQEVG
Trigger: GCCTACTTCCTGCCTGAGGCACCGGCGGAGCTGCTG...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp GTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACCACGTACCTTGTGCTTaGCACCTGGGTTTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: VVSDVAAHHEAGQHLVLDHVPCA*HLGFWA
Trigger: AGCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTG...GTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR CAA 90 bp AGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTaGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTACCACCTCC +
Preference number: 2 (lower is better)
Translates to: SSSTRGRWEMRTWMW*VMRSYLGYMASTTS
Trigger: GGAGGTGGTACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCCCGTGGCTGTCGACGTaGGTGCGCAGGAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: SLQGGDDASLRDGDALLLPWLST*VRRKFL
Trigger: CAAGAACTTCCTGCGCACTCACGTCGACAGCCACGG...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAAGCCGGGGGCCCGCCATaGTCACCCACTCGCGCACAG +
Preference number: 2 (lower is better)
Translates to: GKSLAHAAHDAELLCVYEAGGPP*SPTRAQ
Trigger: CTGTGCGCGAGTGGGTGAGCATGGCGGGCCCCCGGC...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGTGGGCCTCCGCCACCATGGCCTCATGGATaGTGGTTCTGTCCTGGTCAT +
Preference number: 2 (lower is better)
Translates to: RRLRSHSPADGCARGPPPPWPHG*WFCPGH
Trigger: ATGACCAGGACAGAACCAGCATCCATGAGGCCATGG...TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp GATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGCCGTGGCTGTCGACGTaGGTGCGCAGGAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: DADMDVVGDAVVLGVHGQPWLST*VRRKFL
Trigger: CAAGAACTTCCTGCGCACTCACGTCGACAGCCACGG...CTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCTGCTGGGGTGGTGTCTaGCGTGGCTGCCCACCACGA +
Preference number: 2 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCCWGGV*RGCPPR
Trigger: TCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCA...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTCCCGAGTTCATCAAGTaGTCTGGTTTTGTGTCCATA +
Preference number: 2 (lower is better)
Translates to: PPLRLRSPERCAGTVVPSPEFIK*SGFVSI
Trigger: TATGGACACAAAACCAGAGCACTTGATGAACTCGGG...AGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR-3UTR CCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCCACTCGCGCACAGAGTaGCCTTTGAGATCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: SLQGGDDASLRDGDALLLHSRTE*PLRSSR
Trigger: CCTGGAGGATCTCAAAGGCCACTCTGTGCGCGAGTG...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATAGATCTGCGAGGAGAATaGCGTCCTTGGAGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIDLRGE*RPWSGA
Trigger: TGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATC...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCGGGTGGTGTCTGACGTaGCTGCCCACCACGAAGCGG +
Preference number: 2 (lower is better)
Translates to: GMLPVAIDSFLRSLYILAGWCLT*LPTTKR
Trigger: CCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCC...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CAGGGCCAGAGCCAGGCCTCTCTTGATGTCTTCATGACCATAGATGGAAGGAGCTGGTTCAGATGCAGCTaGCTCAGCGAGCGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: QGQSQASLDVFMTIDGRSWFRCS*LSERSS
Trigger: GGAGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCA...GCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCACCGTGCAGCGAGCCTaGAGGGAGGTGACGATGCCA +
Preference number: 2 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCTVQRA*REVTMP
Trigger: TGGCATCGTCACCTCCCTGCAGGCTCGCTGCACGGT...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp TGGCAGAAAGGACCCAGGACGAAATTGCACTTGTTGCAGTTGTACTaGACCATGCTGAGCTGGGGCAGGACGCCAGTGCAGCTGGTCACC +
Preference number: 2 (lower is better)
Translates to: WQKGPRTKLHLLQLY*TMLSWGRTPVQLVT
Trigger: GGTGACCAGCTGCACTGGCGTCCTGCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp TGGGACTGGCAGAAAGGACCCAGGACGAAATTGCACTTGTTGCAGTaGTACTTGACCATGCTGAGCTGGGGCAGGACGCCAGTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: WDWQKGPRTKLHLLQ*YLTMLSWGRTPVQL
Trigger: CAGCTGCACTGGCGTCCTGCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGGCTGGACATACGCCGTaGGGCCCACAGCCGACGCCC +
Preference number: 2 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILAGHTP*GPQPTP
Trigger: GGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCAGC...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAATGCTGGGGTGGTGTCTaGCGTGGCTGCCCACCACGA +
Preference number: 2 (lower is better)
Translates to: GKSLAHAAHDAELLCVYECWGGV*RGCPPR
Trigger: TCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCA...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CCGAATGCACAAATAAGAGAGTGGGGAAACAGACAGGGAGCAATGGCAGCTGATAGGAGCCCAGAACGCTaGGCTGGCACTGTCGTGCCC +
Preference number: 2 (lower is better)
Translates to: PNAQIREWGNRQGAMAADRSPER*AGTVVP
Trigger: GGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCT...ATCAGCTGCCATTGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGCATTCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR-3UTR CCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAAAGATGGATGCGCGCGTaGGCCTCCGCCATGCGGATC +
Preference number: 2 (lower is better)
Translates to: GKSLAHAAHDAELLCVYERWMRA*ASAMRI
Trigger: GATCCGCATGGCGGAGGCCCACGCGCGCATCCATCT...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp TGGTTCTGGGACTGGCAGAAAGGACCCAGGACGAAATTGCACTTGTaGCAGTTGTACTTGACCATGCTGAGCTGGGGCAGGACGCCAGTG +
Preference number: 2 (lower is better)
Translates to: WFWDWQKGPRTKLHL*QLYLTMLSWGRTPV
Trigger: CACTGGCGTCCTGCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp TCCTGGTTCTGGGACTGGCAGAAAGGACCCAGGACGAAATTGCACTaGTTGCAGTTGTACTTGACCATGCTGAGCTGGGGCAGGACGCCA +
Preference number: 2 (lower is better)
Translates to: SWFWDWQKGPRTKLH*LQLYLTMLSWGRTP
Trigger: TGGCGTCCTGCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp AGAAACTGCGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTaGATATCACCACGTACCTTGTGCTTGCCACCTGGGTTTTTGGGC +
Preference number: 2 (lower is better)
Translates to: RNCDFAVPGSPHKST*ISPRTLCLPPGFLG
Trigger: GCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTTGCGCAGGAAGTTCTTaGAGCGGTGGTGGATCTCCA +
Preference number: 2 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASCAGSS*SGGGSP
Trigger: TGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCA...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCTGGTCTCCTCCATGTTaGCCTCAAAGGGGCCGGCCG +
Preference number: 2 (lower is better)
Translates to: HSCCDRCQSALSRLLACSWSPPC*PQRGRP
Trigger: CGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCA...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCATGGTCTCCTCCATGTTaGCCTCAAAGGGGCCGGCCG +
Preference number: 2 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPWSPPC*PQRGRP
Trigger: CGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCA...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCGAGCCAGGCCTCTCTTaGTGTCTTCATGACCATAGA +
Preference number: 2 (lower is better)
Translates to: SLQGGDDASLRDGDALLLEPGLS*CLHDHR
Trigger: TCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTC...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCGAGGCAGGTGGGAGATaGGGACATGGATGTGGTTGG +
Preference number: 2 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCEAGGR*GHGCGW
Trigger: CCAACCACATCCATGTCCGCATCTCCCACCTGCCTC...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTGGGGCAGGACGCCAGTaGAGCTGGTCACCACCCCAC +
Preference number: 2 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLGAGRQ*SWSPPH
Trigger: GTGGGGTGGTGACCAGCTGCACTGGCGTCCTGCCCC...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGAGGGGCAGGACGCCAGTaGAGCTGGTCACCACCCCAC +
Preference number: 2 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRGAGRQ*SWSPPH
Trigger: GTGGGGTGGTGACCAGCTGCACTGGCGTCCTGCCCC...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCCCAGCACGTGCTCCCTaGCTGCCAAGTCCTCATAGT +
Preference number: 2 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCPARAP*LPSPHS
Trigger: ACTATGAGGACTTGGCAGCCAGGGAGCACGTGCTGG...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCCGTACTTGGGGTACATaGCCAGTACCACCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCRTWGT*PVPPPG
Trigger: CCCTGGAGGTGGTACTGGCCATGTACCCCAAGTACG...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCTGGTCACCACCCCACTaGTGCGGATCAGCTGGTTCA +
Preference number: 2 (lower is better)
Translates to: GMLPVAIDSFLRSLYILAWSPPH*CGSAGS
Trigger: TGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCA...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CAGGGCCAGAGCCAGGCCTCTCTTGATGTCTTCATGACCATAGATGGAAGGAGCTTCACCTCCTGGTTCTaGGACTGGCAGAAAGGACCC +
Preference number: 2 (lower is better)
Translates to: QGQSQASLDVFMTIDGRSFTSWF*DWQKGP
Trigger: GGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAA...GCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACCTGGTTTCACCTCCTaGTTCTGGGACTGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIPGFTS*FWDWQK
Trigger: TTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGG...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp TATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGCAACAGCTCATTGGGAGAATGGCGTCCTTaGAGCGGGGCAGCCGGCCAG +
Preference number: 2 (lower is better)
Translates to: YVTCSATNCFSMKSNSSLGEWRP*SGAAGQ
Trigger: CTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCC...CAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp GTCAGTTCCCCTACAGCAACCTTGTTGTCCTTCTTGGCCACGTGGTaGGCTAGGATGACAGTGGCAAAGACAGGGAAGCCATTGGCAGTG +
Preference number: 2 (lower is better)
Translates to: VSSPTATLLSFLATW*ARMTVAKTGKPLAV
Trigger: CACTGCCAATGGCTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGAACTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp GTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCACCTaGTCCTGGTCCATCTGGTTGAGCTTCGGGTGGACCCTCTCCTTG +
Preference number: 2 (lower is better)
Translates to: VAIDSFLRSLYILAT*SWSIWLSFGWTLSL
Trigger: CAAGGAGAGGGTCCACCCGAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp ATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTaGGCCACCTTGTCCTGGTCCATCTGGTTGAGCTTCGGGTGGACC +
Preference number: 2 (lower is better)
Translates to: MLPVAIDSFLRSLYI*ATLSWSIWLSFGWT
Trigger: GGTCCACCCGAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGCCCCCTGGCCAGTGGTaGAGATGGCTCGGCTGGACA +
Preference number: 2 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILPPGQW*RWLGWT
Trigger: TGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGG...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGCACGTGCTCCCTGGCTaGCAAGTCCTCATAGTTCAC +
Preference number: 2 (lower is better)
Translates to: LSFLATWLARMTVAKTGKHVLPG*QVLIVH
Trigger: GTGAACTATGAGGACTTGGCAGCCAGGGAGCACGTG...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCATGGTTCAGATGCAGCTaGCTCAGCGAGCGCAGCTCC +
Preference number: 2 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPWFRCS*LSERSS
Trigger: GGAGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCA...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCTCACCACCCCACTGGTaGGGATCAGCTGGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCSPPHW*GSAGSD
Trigger: ATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGA...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGGCTGTCCACCAGATCTaGGAGGAGAATGGCGTCCTT +
Preference number: 2 (lower is better)
Translates to: GTDHPKPESQGILMDGIGAVHQI*EENGVL
Trigger: AAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGC...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACGTGGGCCTCCGCCATaGGGATCATGGACTCGATGT +
Preference number: 2 (lower is better)
Translates to: HRASELLQDHFPFQVVAERGPPP*GSWTRC
Trigger: ACATCGAGTCCATGATCCGCATGGCGGAGGCCCACG...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAATTGACCATGCTGAGCTaGGGCAGGACGCCAGTGCAG +
Preference number: 2 (lower is better)
Translates to: HRASELLQDHFPFQVVAELTMLS*GRTPVQ
Trigger: CTGCACTGGCGTCCTGCCCCAGCTCAGCATGGTCAA...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp TCTCCGCACAAGAGCACGTTGATATCACCACGTACCTTGTGCTTGCCACCTGGGCCTGGTTTCACCTCCTaGTTCTGGGACTGGCAGAAA +
Preference number: 2 (lower is better)
Translates to: SPHKSTLISPRTLCLPPGPGFTS*FWDWQK
Trigger: TTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGG...CCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCAGATCTGCGAGGAGAATaGCGTCCTTGGAGCGGGGCA +
Preference number: 2 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPDLRGE*RPWSGA
Trigger: TGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATC...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCAGGATGTCAAAGCGTaGGATGATGGGCTCTGTGAG +
Preference number: 2 (lower is better)
Translates to: GTDHPKPESQGILMDGIGQDVKA*DDGLCE
Trigger: CTCACAGAGCCCATCATCTCACGCTTTGACATCCTG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR-3UTR GCA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATCCTCCAGGTTCTCGATaGTCTCGATCATCTCCTCGT +
Preference number: 2 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHPPGSR*SRSSPR
Trigger: ACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGG...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAAACTGCGACTTCGCTGTaGCAGGGTCTCCGCACAAGA +
Preference number: 2 (lower is better)
Translates to: GKSLAHAAHDAELLCVYETATSL*QGLRTR
Trigger: TCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGT...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp TATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGCAACAGCTCATTGACCGTGCAGCGAGCCTaGAGGGAGGTGACGATGCCA +
Preference number: 2 (lower is better)
Translates to: YVTCSATNCFSMKSNSSLTVQRA*REVTMP
Trigger: TGGCATCGTCACCTCCCTGCAGGCTCGCTGCACGGT...CAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAAAAGTTCTTGAAGCGGTaGTGGATCTCCAGCCGGGGG +
Preference number: 2 (lower is better)
Translates to: HRASELLQDHFPFQVVAEKFLKR*WISSRG
Trigger: CCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTT...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAACCAGCACGTGCTCCCTaGCTGCCAAGTCCTCATAGT +
Preference number: 2 (lower is better)
Translates to: GKSLAHAAHDAELLCVYEPARAP*LPSPHS
Trigger: ACTATGAGGACTTGGCAGCCAGGGAGCACGTGCTGG...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAATCCTGGTTCTGGGACTaGCAGAAAGGACCCAGGACG +
Preference number: 2 (lower is better)
Translates to: GKSLAHAAHDAELLCVYESWFWD*QKGPRT
Trigger: CGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGA...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCTCCTTCTTGGCCACGTaGTTGGCTAGGATGACAGTG +
Preference number: 2 (lower is better)
Translates to: GMLPVAIDSFLRSLYILASFLAT*LARMTV
Trigger: CACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGA...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGGCCAGCATCTCGTCCTaGACTGGGTCCACGGTGTCC +
Preference number: 2 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILASISS*TGSTVS
Trigger: GGACACCGTGGACCCAGTCCAGGACGAGATGCTGGC...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR-3UTR CCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGCCACGCCATACGTGTTaGGCATGGCGGGCTCAGCAG +
Preference number: 2 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILPRHTC*AWRAQQ
Trigger: CTGCTGAGCCCGCCATGCCCAACACGTATGGCGTGG...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGCCGCCATGCGGATCATaGACTCGATGTGCCGCACCG +
Preference number: 2 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILPPCGS*TRCAAP
Trigger: CGGTGCGGCACATCGAGTCCATGATCCGCATGGCGG...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp ACATCTTCATCGGTCAGTTCCCCTACAGCAACCTTGTTGTCCTTCTaGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAG +
Preference number: 2 (lower is better)
Translates to: TSSSVSSPTATLLSF*ATWLARMTVAKTGK
Trigger: CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGAACTGACCGATGAAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp ATGTCAAAGCGTGAGATGATGGGCTCTGTGAGGTCCACGTTCTCAGAGAAAGTCGCACAGAGTGGCCTTTaGGATCCTCCAGGTTCTCGA +
Preference number: 2 (lower is better)
Translates to: MSKREMMGSVRSTFSEKVAQSGL*DPPGSR
Trigger: TCGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGC...GACTTTCTCTGAGAACGTGGACCTCACAGAGCCCATCATCTCACGCTTTGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR-3UTR TCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAATGCGCAGGAAGTTCTTaGAGCGGTGGTGGATCTCCA +
Preference number: 2 (lower is better)
Translates to: GKSLAHAAHDAELLCVYECAGSS*SGGGSP
Trigger: TGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCA...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGAGGCCAGCCGCCACTTTaGCTGGACTCTCCTGGATTC +
Preference number: 2 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRGQPPL*LDSPGF
Trigger: GAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCC...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCATCTCGTCTCCTGGCTTaGAGCTGTCCACCAGATCTG +
Preference number: 2 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPSRLLA*SCPPDL
Trigger: CAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGA...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCAAGTAAGACACACTaGCAAGGCATCCCACCCAAA +
Preference number: 2 (lower is better)
Translates to: GTDHPKPESQGILMDGIGPSKTH*QGIPPK
Trigger: TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR-3UTR CCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCTTCAACCAGCTCTCTaGCCAAAGGCAGCAAAAGCA +
Preference number: 2 (lower is better)
Translates to: GTDHPKPESQGILMDGIGLQPAL*PKAAKA
Trigger: TGCTTTTGCTGCCTTTGGCCAGAGAGCTGGTTGAAG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR CAA 90 bp GTGATCATCTTCACATCTTCATCGGTCAGTTCCCCTACAGCAACCTaGTTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCA +
Preference number: 2 (lower is better)
Translates to: VIIFTSSSVSSPTAT*LSFLATWLARMTVA
Trigger: TGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGAACTGACCGATGAAGATGTGAAGATGATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGCGTACTTGGGGTACATaGCCAGTACCACCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILRTWGT*PVPPPG
Trigger: CCCTGGAGGTGGTACTGGCCATGTACCCCAAGTACG...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCACCTTGTTGTCCTTCTTaGCCACGTGGTTGGCTAGGA +
Preference number: 2 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPPCCPS*PRGWLG
Trigger: TCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGG...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCTGGAAGGAGCAATGCTaGCAAAGATCTTCTCTCCGA +
Preference number: 2 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCWKEQC*QRSSLR
Trigger: TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCA...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp TATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGCAACAGCTCATTGCTTGTGCTTGCCACCTaGGTTTTTGGGCTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: YVTCSATNCFSMKSNSSLLVLAT*VFGLPS
Trigger: GGAGGGGAGCCCAAAAACCCAGGTGGCAAGCACAAG...CAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 90 bp ATCATCTTCACATCTTCATCGGTCAGTTCCCCTACAGCAACCTTGTaGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAG +
Preference number: 2 (lower is better)
Translates to: IIFTSSSVSSPTATL*SFLATWLARMTVAK
Trigger: CTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGAACTGACCGATGAAGATGTGAAGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTGCACAGAGTGGCCTTTaGGATCCTCCAGGTTCTCGA +
Preference number: 2 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLAQSGL*DPPGSR
Trigger: TCGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGC...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAAAGCCATTGGCAGTGTTaGGGGAGCCATCATAGTTGT +
Preference number: 2 (lower is better)
Translates to: HRASELLQDHFPFQVVAESHWQC*GSHHSC
Trigger: ACAACTATGATGGCTCCCTCAACACTGCCAATGGCT...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCCCCGAGTTCATCAAGTaGTCTGGTTTTGTGTCCATA +
Preference number: 2 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPPEFIK*SGFVSI
Trigger: TATGGACACAAAACCAGAGCACTTGATGAACTCGGG...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR-3UTR GCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAATCACCACGTACCTTGTaGTTGCCACCTGGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: GKSLAHAAHDAELLCVYESPRTL*LPPGFL
Trigger: CAAAAACCCAGGTGGCAAGCACAAGGTACGTGGTGA...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CAAGAGGGCAGCAGCTCTCCTGACATCCATGTAAGAAGGCTAACACCTAAACCAATCCAAGGTACTGAGTaGAGACAAAGCACTCGGAGG +
Preference number: 2 (lower is better)
Translates to: QEGSSSPDIHVRRLTPKPIQGTE*RQSTRR
Trigger: CCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGAT...TGGTTTAGGTGTTAGCCTTCTTACATGGATGTCAGGAGAGCTGCTGCCCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR-3UTR CCA 90 bp TATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGCAACAGCTCATTGAGCCGCCACTTTGCCTaGACTCTCCTGGATTCGGAT +
Preference number: 2 (lower is better)
Translates to: YVTCSATNCFSMKSNSSLSRHFA*TLLDSD
Trigger: ATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCT...CAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCCTTCATGACCATAGATaGAAGGAGCAATGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCLHDHR*KEQCWQ
Trigger: TTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAG...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGGTTGTCACGCCGGAATaGAAGGTAGCGGGCAAAAGT +
Preference number: 2 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILVVTPE*KVAGKS
Trigger: ACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAAC...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGAAGCCATTGGCAGTGTTaGGGGAGCCATCATAGTTGT +
Preference number: 2 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRSHWQC*GSHHSC
Trigger: ACAACTATGATGGCTCCCTCAACACTGCCAATGGCT...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR TCA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGCTTTCTCAATATACTTaGGAAACTGCGACTTCGCTG +
Preference number: 2 (lower is better)
Translates to: TRIPRNPYGWHRASELLQLSQYT*ETATSL
Trigger: CAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAG...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR GCA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTTCACCACGTACCTTGTaGTTGCCACCTGGGTTTTTG +
Preference number: 2 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLSPRTL*LPPGFL
Trigger: CAAAAACCCAGGTGGCAAGCACAAGGTACGTGGTGA...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCATGCTGGTTCTGTCCTaGTCATTCATCTTGTCAAAT +
Preference number: 2 (lower is better)
Translates to: GMLPVAIDSFLRSLYILAMLVLS*SFILSN
Trigger: ATTTGACAAGATGAATGACCAGGACAGAACCAGCAT...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGTGGCCTCATGGATGCTaGTTCTGTCCTGGTCATTCA +
Preference number: 2 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILWPHGC*FCPGHS
Trigger: TGAATGACCAGGACAGAACCAGCATCCATGAGGCCA...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CCA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCGTTCATCAAGTGCTCTaGTTTTGTGTCCATAAAGCA +
Preference number: 2 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGVHQVL*FCVHKA
Trigger: TGCTTTATGGACACAAAACCAGAGCACTTGATGAAC...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR-3UTR CCA 90 bp CTGAAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGCAGCAAAAGCCAAGTAAGACACACTaGCAAGGCATCCCACCCAAA +
Preference number: 2 (lower is better)
Translates to: LKTITNIFNQLSGQRQQKPSKTH*QGIPPK
Trigger: TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGG...CTTTTGCTGCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR-3UTR CCA 90 bp TATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGCAACAGCTCATTGTGGAAGGAGCAATGCTaGCAAAGATCTTCTCTCCGA +
Preference number: 2 (lower is better)
Translates to: YVTCSATNCFSMKSNSSLWKEQC*QRSSLR
Trigger: TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCA...CAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp TCTCGATCATCTCCTCGTCCTCCTCGCCGTCCTCCGTaGCCCGCTCCACCTGGCGGCGCTTGCGGGCAGGGC +
Preference number: 3 (lower is better)
Translates to: SRSSPRPPRRPP*PAPPGGACGQG
Trigger: GCCCTGCCCGCAAGCGCCGCCAGGTGGAGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGATCGAGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp GCCTCCAAGGTCCACTCCCTGCTGACAGGGTGCCGCTaGACATACGCCGTGAGGCCCACAGCCGACGCCCCC +
Preference number: 3 (lower is better)
Translates to: ASKVHSLLTGCR*TYAVRPTADAP
Trigger: GGGGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCAGCGGCACCCTGTCAGCAGGGAGTGGACCTTGGAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GCTGGTCACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGTCCACCTGGCGGCGCTaGCGGGCAGGGCGCTCCTCG +
Preference number: 3 (lower is better)
Translates to: AGHHPTGADQLVQMQLPQSTWRR*RAGRSS
Trigger: CGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGA...CTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp GGACCTCCTGGGGCAGGGGCTCCACGCCATACGTGTTaGGCATGGCGGGCTCAGCAGCGCTGCCATTGGCCA +
Preference number: 3 (lower is better)
Translates to: GPPGAGAPRHTC*AWRAQQRCHWP
Trigger: TGGCCAATGGCAGCGCTGCTGAGCCCGCCATGCCCAACACGTATGGCGTGGAGCCCCTGCCCCAGGAGGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp GGCCGTGGCTGTCGACGTGAGTGCGCAGGAAGTTCTTaGAGCGGTGGTGGATCTCCAGCCGGGGGCCCGCCA +
Preference number: 3 (lower is better)
Translates to: GRGCRRECAGSS*SGGGSPAGGPP
Trigger: TGGCGGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCACTCACGTCGACAGCCACGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp CCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTaGCACTGTCGTGCCCTCTTCCACCACAGGGGCACA +
Preference number: 3 (lower is better)
Translates to: PTPATEEPRTLR*HCRALFHHRGT
Trigger: TGTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR CCA 72 bp CTGGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATaGCGTCCTTGGAGCGGGGCAGCCGGCCAGCCGCCA +
Preference number: 3 (lower is better)
Translates to: LACSCPPDLRGE*RPWSGAAGQPP
Trigger: TGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp CCAGCCCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTaGCGTGGCTGCCCACCACGAAGCGGGCCAGCATCT +
Preference number: 3 (lower is better)
Translates to: PAPPPPCCWGGV*RGCPPRSGPAS
Trigger: AGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGGGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 72 bp CACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTaGGCTGGCACTGTCGTGCCCTCTTCCACCACAGGG +
Preference number: 3 (lower is better)
Translates to: HIPPLRLRSPER*AGTVVPSSTTG
Trigger: CCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR CCA 72 bp AGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTaGAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTG +
Preference number: 3 (lower is better)
Translates to: SCPPDLRGEWRP*SGAAGQPPLCL
Trigger: CAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp CCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTGACGTaGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCC +
Preference number: 3 (lower is better)
Translates to: PSSSLLLGWCLT*LPTTKRASISS
Trigger: GGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCTCCACCTGGCGGCGCTaGCGGGCAGGGCGCTCCTCG +
Preference number: 3 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARSTWRR*RAGRSS
Trigger: CGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGA...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 72 bp CGTCCTTGGAGCGGGGCAGCCGGCCAGCCGCCACTTTaGCTGGACTCTCCTGGATTCGGATACGCTGGTAGT +
Preference number: 3 (lower is better)
Translates to: RPWSGAAGQPPL*LDSPGFGYAGS
Trigger: ACTACCAGCGTATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp GTGCAGCTGGTCACCACCCCACTGGTGCGGATCAGCTaGTTCAGATGCAGCTGCCTCAGCGAGCGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: VQLVTTPLVRIS*FRCSCLSERSS
Trigger: GGAGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCAGCTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp TGGACATACGCCGTGAGGCCCACAGCCGACGCCCCCTaGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTC +
Preference number: 3 (lower is better)
Translates to: WTYAVRPTADAP*PVVKMARLDTF
Trigger: GAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCGTGATGCGGTCGTACTaGGGGTACATGGCCAGTACC +
Preference number: 3 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVVMRSY*GYMAST
Trigger: GGTACTGGCCATGTACCCCAAGTACGACCGCATCAC...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp TCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACTGGGTCATGGTCTCCTCCATGTaGACCTCAAAGGGGCCGGCC +
Preference number: 3 (lower is better)
Translates to: SDVAAHHEAGQHLVLDWVMVSSM*TSKGPA
Trigger: GGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCAT...GACCCAGTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR CCA 72 bp CTTGGAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTaGACTCTCCTGGATTCGGATACGCTGGTAGTTCTG +
Preference number: 3 (lower is better)
Translates to: LGAGQPASRHFA*TLLDSDTLVVL
Trigger: CAGAACTACCAGCGTATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGTCGCTGATGCGCTCCTaGAAGACGTTGTGGCCGTGG +
Preference number: 3 (lower is better)
Translates to: PSSSLLLGWCLTWLPTTKSLMRS*KTLWPW
Trigger: CCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGA...CTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCACCTTGTTGTCCTTCTaGGCCACGTGGTTGGCTAGG +
Preference number: 3 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVTLLSF*ATWLAR
Trigger: CCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGT...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 72 bp TATCTCGTCTCCTGGCTTGCAGCTGTCCACCAGATCTaGGAGGAGAATGGCGTCCTTGGAGCGGGGCAGCCG +
Preference number: 3 (lower is better)
Translates to: YLVSWLAAVHQI*EENGVLGAGQP
Trigger: CGGCTGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACGCTCCTTGAAGACGTaGTGGCCGTGGCTGTCGACG +
Preference number: 3 (lower is better)
Translates to: HQRQVGDADMDVVGDAVVRSLKT*WPWLST
Trigger: CGTCGACAGCCACGGCCACAACGTCTTCAAGGAGCG...TACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp ACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCCTCTCACGGTTCTCTTaGCACATGTCGCTGATGCGC +
Preference number: 3 (lower is better)
Translates to: TTPLVRISWFRCSCLSERLSRFS*HMSLMR
Trigger: GCGCATCAGCGACATGTGCAAAGAGAACCGTGAGAG...GCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTATCGCTGATGCGCTCCTaGAAGACGTTGTGGCCGTGG +
Preference number: 3 (lower is better)
Translates to: HQRQVGDADMDVVGDAVVSLMRS*KTLWPW
Trigger: CCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGA...TACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp CGCTCCTTGAAGACGTTGTGGCCGTGGCTGTCGACGTaGGTGCGCAGGAAGTTCTTGAAGCGGTGGTGGATC +
Preference number: 3 (lower is better)
Translates to: RSLKTLWPWLST*VRRKFLKRWWI
Trigger: GATCCACCACCGCTTCAAGAACTTCCTGCGCACTCACGTCGACAGCCACGGCCACAACGTCTTCAAGGAGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp TCCACCAGAGGCAGGTGGGAGATGCGGACATGGATGTaGTTGGTGATGCGGTCGTACTTGGGGTACATGGCC +
Preference number: 3 (lower is better)
Translates to: STRGRWEMRTWM*LVMRSYLGYMA
Trigger: GGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp AGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATaGATGTGGTTGGTGATGCGGTCGTACTTGGGGTAC +
Preference number: 3 (lower is better)
Translates to: SSSTRGRWEMRT*MWLVMRSYLGY
Trigger: GTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACTTGCACTTGTTGCAGTaGTACTTGACCATGCTGAGC +
Preference number: 3 (lower is better)
Translates to: VVSDVAAHHEAGQHLVLDLHLLQ*YLTMLS
Trigger: GCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAA...GTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR-3UTR CAA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCAGGACGAAATTGCACTaGTTGCAGTTGTACTTGACC +
Preference number: 3 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVRTKLH*LQLYLT
Trigger: GGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCT...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCCCACGTACCTTGTGCTaGCCACCTGGGTTTTTGGGC +
Preference number: 3 (lower is better)
Translates to: SLQGGDDASLRDGDALLLPRTLC*PPGFLG
Trigger: GCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTGG...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCCGCTCCTTGAAGACGTaGTGGCCGTGGCTGTCGACG +
Preference number: 3 (lower is better)
Translates to: GMLPVAIDSFLRSLYILARSLKT*WPWLST
Trigger: CGTCGACAGCCACGGCCACAACGTCTTCAAGGAGCG...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGTGATGCGGTCGTACTaGGGGTACATGGCCAGTACC +
Preference number: 3 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARVMRSY*GYMAST
Trigger: GGTACTGGCCATGTACCCCAAGTACGACCGCATCAC...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGTGGGCCTCCGCCATTGCACTTGTTGCAGTaGTACTTGACCATGCTGAGC +
Preference number: 3 (lower is better)
Translates to: RRLRSHSPADGCARGPPPLHLLQ*YLTMLS
Trigger: GCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAA...TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCGGCCAGCCGCCACTTaGCCTGGACTCTCCTGGATT +
Preference number: 3 (lower is better)
Translates to: GTDHPKPESQGILMDGIGRPAAT*PGLSWI
Trigger: AATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp CCGCCATGCTCACCCACTCGCGCACAGAGTGGCCTTTaGGATCCTCCAGGTTCTCGATGCTCTCGATCATCT +
Preference number: 3 (lower is better)
Translates to: PPCSPTRAQSGL*DPPGSRCSRSS
Trigger: AGATGATCGAGAGCATCGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGCGCGAGTGGGTGAGCATGGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp GAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTaGTGCGGTCGTACTTGGGGTACATGGCCAGTACCA +
Preference number: 3 (lower is better)
Translates to: EAGGRCGHGCGW*CGRTWGTWPVP
Trigger: TGGTACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp ATACTTGAGAAACTGCGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTATGGTCTCCTCCATGTaGACCTCAAAGGGGCCGGCC +
Preference number: 3 (lower is better)
Translates to: ILEKLRLRCARVSAQEHVMVSSM*TSKGPA
Trigger: GGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCAT...AACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACGCCCTCCTATGGGGTaGGCGGCAGCAATGACCGTG +
Preference number: 3 (lower is better)
Translates to: HRASELLQDHFPFQVVAERPPMG*AAAMTV
Trigger: CACGGTCATTGCTGCCGCCAACCCCATAGGAGGGCG...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR TCA 72 bp ACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTaGTATCACCACGTACCTTGTGCTTGCCACCTGGGT +
Preference number: 3 (lower is better)
Translates to: TSLCQGLRTRAR*YHHVPCACHLG
Trigger: ACCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 72 bp GTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTaGTCCATGGCCTCATGGATGCTGGTTCTGTCCTGG +
Preference number: 3 (lower is better)
Translates to: VTMPAFEMEMLC*SMASWMLVLSW
Trigger: CCAGGACAGAACCAGCATCCATGAGGCCATGGAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp CACTCAGGACAGGAGCCTGGTTTCACCTCCTGGTTCTaGGACTGGCAGAAAGGACCCAGGACGAAATTGCAC +
Preference number: 3 (lower is better)
Translates to: HSGQEPGFTSWF*DWQKGPRTKLH
Trigger: GTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGGCTCCTGTCCTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp TTCCTCAGGTCACTGTACATCTTGGCCACCTTGTCCTaGTCCATCTGGTTGAGCTTCGGGTGGACCCTCTCC +
Preference number: 3 (lower is better)
Translates to: FLRSLYILATLS*SIWLSFGWTLS
Trigger: GGAGAGGGTCCACCCGAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAAGATGTACAGTGACCTGAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCGCACAGAGTGGCCTTaGAGATCCTCCAGGTTCTCG +
Preference number: 3 (lower is better)
Translates to: GTDHPKPESQGILMDGIGRTEWP*RSSRFS
Trigger: CGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGCG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CAGGGCCAGAGCCAGGCCTCTCTTGATGTCTTCATGACCATAGATGGAAGGAGCCTCTCACGGTTCTCTTaGCACATGTCGCTGATGCGC +
Preference number: 3 (lower is better)
Translates to: QGQSQASLDVFMTIDGRSLSRFS*HMSLMR
Trigger: GCGCATCAGCGACATGTGCAAAGAGAACCGTGAGAG...GCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCGGACCCAGGACGAAATaGCACTTGTTGCAGTTGTAC +
Preference number: 3 (lower is better)
Translates to: SLQGGDDASLRDGDALLLGPRTK*HLLQLY
Trigger: GTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCC...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp ATGTCAAAGCGTGAGATGATGGGCTCTGTGAGGTCCACGTTCTCAGAGAAAGTCCGGCCAGCCGCCACTTaGCCTGGACTCTCCTGGATT +
Preference number: 3 (lower is better)
Translates to: MSKREMMGSVRSTFSEKVRPAAT*PGLSWI
Trigger: AATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCG...GACTTTCTCTGAGAACGTGGACCTCACAGAGCCCATCATCTCACGCTTTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
3UTR-3UTR CAA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTAGGAGAATGGCGTCCTaGGAGCGGGGCAGCCGGCCA +
Preference number: 3 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLRRMAS*ERGSRP
Trigger: TGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCT...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 72 bp GATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTaGAGCTGTCCACCAGATCTGCGAGGAGAATGGCGT +
Preference number: 3 (lower is better)
Translates to: DRCQSALSRLLA*SCPPDLRGEWR
Trigger: ACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp AGACAGGGAGCAATGGCAGCTGATAACTGTGGCGAGTaGATAATCCGCATGACTCACATCCCACCCCTGCGA +
Preference number: 3 (lower is better)
Translates to: RQGAMAADNCGE*IIRMTHIPPLR
Trigger: TCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACAGTTATCAGCTGCCATTGCTCCCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR CCA 72 bp GGACAGGAGCCTGGTTTCACCTCCTGGTTCTGGGACTaGCAGAAAGGACCCAGGACGAAATTGCACTTGTTG +
Preference number: 3 (lower is better)
Translates to: GQEPGFTSWFWD*QKGPRTKLHLL
Trigger: CAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGGCTCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCACCTTGTCGTGCGCAGGAAGTTCTaGAAGCGGTGGTGGATCTCC +
Preference number: 3 (lower is better)
Translates to: ACRHRFFPQVTVHLGHLVVRRKF*KRWWIS
Trigger: GGAGATCCACCACCGCTTCAAGAACTTCCTGCGCAC...GACAAGGTGGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCCGGACATGGATGTGGTaGGTGATGCGGTCGTACTTG +
Preference number: 3 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCRTWMW*VMRSYL
Trigger: CAAGTACGACCGCATCACCAACCACATCCATGTCCG...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp CCTTGTTGTCCTTCTTGGCCACGTGGTTGGCTAGGATaGCAGTGGCAAAGACAGGGAAGCCATTGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: PCCPSWPRGWLG*QWQRQGSHWQC
Trigger: ACACTGCCAATGGCTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp TCAATAGTGTCCTGCTGGGCCCCAAAGCGGTTGCGCTaGTATGTCACCTGCTCTGCCACTAACTGCTTCAGT +
Preference number: 3 (lower is better)
Translates to: SIVSCWAPKRLR*YVTCSATNCFS
Trigger: ACTGAAGCAGTTAGTGGCAGAGCAGGTGACATATCAGCGCAACCGCTTTGGGGCCCAGCAGGACACTATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 72 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTaGGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGC +
Preference number: 3 (lower is better)
Translates to: ARLDTFSIYLRN*DFAVPGSPHKS
Trigger: GCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTaGTTTTGTGTCCATAAAGCACAGAGGGCACTGACC +
Preference number: 3 (lower is better)
Translates to: ALTLVPRVHQVL*FCVHKAQRALT
Trigger: GGTCAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR-3UTR CAA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCCGCACAGAGTGGCCTTaGAGATCCTCCAGGTTCTCG +
Preference number: 3 (lower is better)
Translates to: HSCCDRCQSALSRLLACSRTEWP*RSSRFS
Trigger: CGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGCG...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCTTGTTGCAGTTGTACTaGACCATGCTGAGCTGGGGC +
Preference number: 3 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCLLQLY*TMLSWG
Trigger: GCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAA...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp TATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGCAACAGCTCATTGAGCCCCTCCTCCTCCTaGTTGCTGGGGTGGTGTCTG +
Preference number: 3 (lower is better)
Translates to: YVTCSATNCFSMKSNSSLSPSSS*LLGWCL
Trigger: CAGACACCACCCCAGCAACAAGGAGGAGGAGGGGCT...CAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp TATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGCAACAGCTCATTGTCCACGCCATACGTGTaGGGCATGGCGGGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: YVTCSATNCFSMKSNSSLSTPYV*GMAGSA
Trigger: TGCTGAGCCCGCCATGCCCAACACGTATGGCGTGGA...CAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp GTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTaGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAAT +
Preference number: 3 (lower is better)
Translates to: VVIDASQLYLVS*LAAVHQICEEN
Trigger: ATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAAATCTCGTCTCCTGGCTaGCAGCTGTCCACCAGATCT +
Preference number: 3 (lower is better)
Translates to: HRASELLQDHFPFQVVAEISSPG*QLSTRS
Trigger: AGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGAT...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCATATCACCACGTACCTaGTGCTTGCCACCTGGGTTT +
Preference number: 3 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCISPRT*CLPPGF
Trigger: AAACCCAGGTGGCAAGCACAAGGTACGTGGTGATAT...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGTCTCGTCCTATGGGGTaGGCGGCAGCAATGACCGTG +
Preference number: 3 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILSRPMG*AAAMTV
Trigger: CACGGTCATTGCTGCCGCCAACCCCATAGGACGAGA...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477668.5
3UTR-3UTR CAA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCACCGCACAAGAGCACGTaGATATCACCACGTACCTTG +
Preference number: 3 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPPHKST*ISPRTL
Trigger: CAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGG...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp TATGAAGAGCAACAGCTCATTGTTGTCACGCCGGAATaGAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCG +
Preference number: 3 (lower is better)
Translates to: YEEQQLIVVTPE*KVAGKSLAHAA
Trigger: CGCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATGAGCTGTTGCTCTTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCAGGACGAAATTGCACTaGTTGCAGTTGTACTTGACC +
Preference number: 3 (lower is better)
Translates to: GMLPVAIDSFLRSLYILARTKLH*LQLYLT
Trigger: GGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCT...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGATTCTTGGCCACGTGGTaGGCTAGGATGACAGTGGCA +
Preference number: 3 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRFLATW*ARMTVA
Trigger: TGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAA...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTTTCTTGGCCACGTGGTaGGCTAGGATGACAGTGGCA +
Preference number: 3 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLFLATW*ARMTVA
Trigger: TGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAA...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 72 bp GGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTaGAGGATCATTTTCCTTTTCAGGTCGTGGCTGAAC +
Preference number: 3 (lower is better)
Translates to: GILMDGIGPQNC*RIIFLFRSWLN
Trigger: GTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp ATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTaGCAAGATGTTCAGCAACCAAGTAAGACACACTGG +
Preference number: 3 (lower is better)
Translates to: IQGTEWRQSTRR*QDVQQPSKTHW
Trigger: CCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR CCA 72 bp CCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATaGCATAGGGCCTCAGAACTGCTGCAGGATCATTTT +
Preference number: 3 (lower is better)
Translates to: PPQTRIPRNPYG*HRASELLQDHF
Trigger: AAAATGATCCTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR TCA 72 bp TGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTaGCCACCCCAAACCAGAATCCCAAGGAATCCTTAT +
Preference number: 3 (lower is better)
Translates to: CSGFVSIKHRGH*PPQTRIPRNPY
Trigger: ATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
3UTR TCA 72 bp GGAGCAATGCTGGCAAAGATCTTCTCTCCGATCTGCTaGTCCTTGGAGAGGCTAGTGATCATCTTCACATCT +
Preference number: 3 (lower is better)
Translates to: GAMLAKIFSPIC*SLERLVIIFTS
Trigger: AGATGTGAAGATGATCACTAGCCTCTCCAAGGATCAGCAGATCGGAGAGAAGATCTTTGCCAGCATTGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGACGAAATTGCACTTGTaGCAGTTGTACTTGACCATG +
Preference number: 3 (lower is better)
Translates to: TRIPRNPYGWHRASELLQTKLHL*QLYLTM
Trigger: CATGGTCAAGTACAACTGCAACAAGTGCAATTTCGT...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCTCCTGGTCATTCATCTaGTCAAATTCATCAATGAGA +
Preference number: 3 (lower is better)
Translates to: GMLPVAIDSFLRSLYILASWSFI*SNSSMR
Trigger: TCTCATTGATGAATTTGACAAGATGAATGACCAGGA...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR-3UTR CAA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGAAGAGCAACAGCTCATaGTTGTCACGCCGGAATGAA +
Preference number: 3 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILKSNSS*LSRRNE
Trigger: TTCATTCCGGCGTGACAACAATGAGCTGTTGCTCTT...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CCA 72 bp CAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTaGCTGAACTTGTTCATCCTGAAGAGCTCACTGTCA +
Preference number: 3 (lower is better)
Translates to: QNCCRIIFLFRS*LNLFILKSSLS
Trigger: TGACAGTGAGCTCTTCAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR GCA 72 bp GAACTTGTTCATCCTGAAGAGCTCACTGTCATAAAATaGAGAGAGGTTGTGGATGTTGATCTGACGAGCCTT +
Preference number: 3 (lower is better)
Translates to: ELVHPEELTVIK*REVVDVDLTSL
Trigger: AAGGCTCGTCAGATCAACATCCACAACCTCTCTGCATTTTATGACAGTGAGCTCTTCAGGATGAACAAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp ATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCCCACCCCTGCGACTaGGGAGCCCAGAACGCTGCG +
Preference number: 4 (lower is better)
Translates to: IPPLRLRSPERCAGTVVPSHPCD*GAQNAA
Trigger: CGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGA...GGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp CATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACCCACCTGGCGGCGCTTaGGGGCAGGGCGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: HDSHPTPATEEPRTLRWHPPGGA*GQGAPR
Trigger: ACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGG...GTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp CATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACGCCGGGGGCCCGCCATaGTCACCCACTCGCGCACAG +
Preference number: 4 (lower is better)
Translates to: HDSHPTPATEEPRTLRWHAGGPP*SPTRAQ
Trigger: CTGTGCGCGAGTGGGTGAGCATGGCGGGCCCCCGGC...GTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp CCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCAGCTGGCCAGGGCTGGAGGTaGGGGCATCAGTACGCCGGG +
Preference number: 4 (lower is better)
Translates to: PHWCGSAGSDAAASASAAGQGWR*GHQYAG
Trigger: CCCGGCGTACTGATGCCCTCACCTCCAGCCCTGGCC...AGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR TCA 90 bp CCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTCCCCCTGGCCAGTGGTaGAGATGGCTCGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: PPLRLRSPERCAGTVVPSPPGQW*RWLGWT
Trigger: TGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGG...AGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACGCGCTGGCACTGTCGTaGCCTCTTCCACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: GAQNAALALSCPLPPQGHALALS*PLPPQG
Trigger: CCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGC...GTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp CCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACTGCTGGGGTGGTGTCTaGCGTGGCTGCCCACCACGA +
Preference number: 4 (lower is better)
Translates to: PATEEPRTLRWHCRALFHCWGGV*RGCPPR
Trigger: TCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCA...GTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATCCGCATGGCCCGCTCTaGTGCCTCCCTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDPHGPL*CLPLTG
Trigger: GCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGG...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp CAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTaGGAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCT +
Preference number: 4 (lower is better)
Translates to: QLSTRSARRMAS*ERGSRPAATLP
Trigger: AGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACAGGTCCACTCCCTGCTaGCAGGGTGCCGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: VVSDVAAHHEAGQHLVLDRSTPC*QGAAGH
Trigger: ATGTCCAGCGGCACCCTGTCAGCAGGGAGTGGACCT...GTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR TCA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCTGCTGGGGTGGTGTCTaGCGTGGCTGCCCACCACGA +
Preference number: 4 (lower is better)
Translates to: GLQLSTRSARRMASLERGCWGGV*RGCPPR
Trigger: TCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCA...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATCATGGCCCGCTCTGCTaGCTCCCTCTGACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDHGPLC*LPLTGR
Trigger: ACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATG...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGCCGGGGGCCCGCCATaGTCACCCACTCGCGCACAG +
Preference number: 4 (lower is better)
Translates to: RQVGDADMDVVGDAVVLGAGGPP*SPTRAQ
Trigger: CTGTGCGCGAGTGGGTGAGCATGGCGGGCCCCCGGC...CCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GAAGTTCTTGAAGCGGTGGTGGATCTCCAGCCGGGGGCCCGCCATGCTCACCCACAGCAGCTCCGCCGGTaGCTCAGGCAGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: EVLEAVVDLQPGARHAHPQQLRR*LRQEVG
Trigger: GCCTACTTCCTGCCTGAGGCACCGGCGGAGCTGCTG...TGGGTGAGCATGGCGGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTAGTCCCGCAGATGGATaGGCGCGTGGGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGSPADG*ARGPPP
Trigger: TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACT...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTGGACTCTCCTGGATTCGGATATTCTTGAAGCGGTGGTaGATCTCCAGCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: ERGSRPAATLPGLSWIRIFLKRW*ISSRGP
Trigger: GGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAA...TATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGGGGTGGTGTCTGACGTaGCTGCCCACCACGAAGCGG +
Preference number: 4 (lower is better)
Translates to: PSSSLLLGWCLTWLPTTKGWCLT*LPTTKR
Trigger: CCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCC...CTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCGCTGGACATACGCCGTaGGGCCCACAGCCGACGCCC +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLAGHTP*GPQPTP
Trigger: GGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCAGC...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGAGGTCCACTCCCTGCTaGCAGGGTGCCGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: PSSSLLLGWCLTWLPTTKRSTPC*QGAAGH
Trigger: ATGTCCAGCGGCACCCTGTCAGCAGGGAGTGGACCT...CTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCGCCTCCCGGTCACGCTaGCGCATGGCCCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLASRSR*RMARSA
Trigger: AGCAGAGCGGGCCATGCGGCAGCGTGACCGGGAGGC...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACACCGTGCAGCGAGCCTaGAGGGAGGTGACGATGCCA +
Preference number: 4 (lower is better)
Translates to: HDSHPTPATEEPRTLRWHTVQRA*REVTMP
Trigger: TGGCATCGTCACCTCCCTGCAGGCTCGCTGCACGGT...GTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp CATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCGGGCCCCAAAGCGGTTaGGCTGATATGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: HPTPATEEPRTLRWHCRAGPQSG*ADMSPA
Trigger: AGCAGGTGACATATCAGCGCAACCGCTTTGGGGCCC...GGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp TGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCGGTCACGCTGCCGCATaGCCCGCTCTGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: CGEWIIRMTHIPPLRLRSGHAAA*PALLPP
Trigger: GGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACC...GCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACCCAGCACGTGCTCCCTaGCTGCCAAGTCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: GAQNAALALSCPLPPQGHPARAP*LPSPHS
Trigger: ACTATGAGGACTTGGCAGCCAGGGAGCACGTGCTGG...GTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCGTACTTGGGGTACATaGCCAGTACCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVRTWGT*PVPPPG
Trigger: CCCTGGAGGTGGTACTGGCCATGTACCCCAAGTACG...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCGCCAGCATCTCGTCCTaGACTGGGTCCACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GLQLSTRSARRMASLERGASISS*TGSTVS
Trigger: GGACACCGTGGACCCAGTCCAGGACGAGATGCTGGC...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATCCACGCCATACGTGTTaGGCATGGCGGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDPRHTC*AWRAQQ
Trigger: CTGCTGAGCCCGCCATGCCCAACACGTATGGCGTGG...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp ATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCCATGGATGTGGTTGGTaGTGCGGTCGTACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: IPPLRLRSPERCAGTVVPHGCGW*CGRTWG
Trigger: ACCCCAAGTACGACCGCATCACCAACCACATCCATG...GGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTTGGTCTCCTCCATGTTaGCCTCAAAGGGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGWSPPC*PQRGRP
Trigger: CGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCA...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CAGGGCCAGAGCCAGGCCTCTCTTGATGTCTTCATGACCATAGATGGAAGGAGCGCCGGGGGCCCGCCATaGTCACCCACTCGCGCACAG +
Preference number: 4 (lower is better)
Translates to: QGQSQASLDVFMTIDGRSAGGPP*SPTRAQ
Trigger: CTGTGCGCGAGTGGGTGAGCATGGCGGGCCCCCGGC...GCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCCACGTGCTCCCTGGCTaGCAAGTCCTCATAGTTCAC +
Preference number: 4 (lower is better)
Translates to: IPPLRLRSPERCAGTVVPHVLPG*QVLIVH
Trigger: GTGAACTATGAGGACTTGGCAGCCAGGGAGCACGTG...GGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATGCCTCATCAAAGATCTaGAGCAGCTCCGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDASSKI*SSSAGA
Trigger: GGCACCGGCGGAGCTGCTGCAGATCTTTGATGAGGC...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCTCTCGTCTCCTGGCTTaGAGCTGTCCACCAGATCTG +
Preference number: 4 (lower is better)
Translates to: HPTPATEEPRTLRWHCRASRLLA*SCPPDL
Trigger: CAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGA...GGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACCCAGCACGTGCTCCCTaGCTGCCAAGTCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VVSDVAAHHEAGQHLVLDPARAP*LPSPHS
Trigger: ACTATGAGGACTTGGCAGCCAGGGAGCACGTGCTGG...GTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCGGAGAATGGCGTCCTTaGAGCGGGGCAGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLGEWRP*SGAAGQ
Trigger: CTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCC...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTCTCTATCTCGTCTCCTaGCTTGCAGCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: PPLRLRSPERCAGTVVPSLYLVS*LAAVHQ
Trigger: CTGGTGGACAGCTGCAAGCCAGGAGACGAGATAGAG...AGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACACTTGTGCTTGCCACCTaGGTTTTTGGGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EPRTLRWHCRALFHHRGTLVLAT*VFGLPS
Trigger: GGAGGGGAGCCCAAAAACCCAGGTGGCAAGCACAAG...TGTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GCTGGTCACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGACAGCCGACGCCCCCTaGCCAGTGGTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: AGHHPTGADQLVQMQLPQTADAP*PVVKMA
Trigger: AGCCATCTTCACCACTGGCCAGGGGGCGTCGGCTGT...CTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTCATACGTGTTGGGCATaGCGGGCTCAGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGHTCWA*RAQQRC
Trigger: GCAGCGCTGCTGAGCCCGCCATGCCCAACACGTATG...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCTGGTCACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCATACGTGTTGGGCATaGCGGGCTCAGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: AGHHPTGADQLVQMQLPQHTCWA*RAQQRC
Trigger: GCAGCGCTGCTGAGCCCGCCATGCCCAACACGTATG...CTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTCCTCATCGCTGTCTaGGGAGGCAAGAGACACCAT +
Preference number: 4 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVLLIAV*GGKRHH
Trigger: ATGGTGTCTCTTGCCTCCCCAGACAGCGATGAGGAG...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTGGACTCTCCTGGATTCGGATACATGGATGTGGTTGGTaGTGCGGTCGTACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ERGSRPAATLPGLSWIRIHGCGW*CGRTWG
Trigger: ACCCCAAGTACGACCGCATCACCAACCACATCCATG...TATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CAGGGCCAGAGCCAGGCCTCTCTTGATGTCTTCATGACCATAGATGGAAGGAGCGCTGGACATACGCCGTaGGGCCCACAGCCGACGCCC +
Preference number: 4 (lower is better)
Translates to: QGQSQASLDVFMTIDGRSAGHTP*GPQPTP
Trigger: GGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCAGC...GCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCCAAAGCGGTTGCGCTaGTATGTCACCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSSSLLLGWCLTWLPTTKPKRLR*YVTCSA
Trigger: GGCAGAGCAGGTGACATATCAGCGCAACCGCTTTGG...CTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACCGCATGGCCCGCTCTaGTGCCTCCCTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: EWIIRMTHIPPLRLRSPEPHGPL*CLPLTG
Trigger: GCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGG...TTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCCCACCTGGCGGCGCTTaGGGGCAGGGCGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCPPGGA*GQGAPR
Trigger: ACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGG...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCCCACCTGGCGGCGCTTaGGGGCAGGGCGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPPPGGA*GQGAPR
Trigger: ACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGG...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCGAGGCAGGTGGGAGATaGGGACATGGATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: GLQLSTRSARRMASLERGEAGGR*GHGCGW
Trigger: CCAACCACATCCATGTCCGCATCTCCCACCTGCCTC...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTTGGTTCAGATGCAGCTaGCTCAGCGAGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGWFRCS*LSERSS
Trigger: GGAGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCA...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp TCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACTGGGTCGCTGTCCACCAGATCTaGGAGGAGAATGGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: SDVAAHHEAGQHLVLDWVAVHQI*EENGVL
Trigger: AAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGC...GACCCAGTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR GCA 90 bp ACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCACTGCGACTTCGCTGTaGCAGGGTCTCCGCACAAGA +
Preference number: 4 (lower is better)
Translates to: TTPLVRISWFRCSCLSERTATSL*QGLRTR
Trigger: TCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGT...GCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTGGACTCTCCTGGATTCGGATAACCTCAATAGTGTCCTaGTGGGCCCCAAAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: ERGSRPAATLPGLSWIRITSIVS*WAPKRL
Trigger: CAACCGCTTTGGGGCCCAGCAGGACACTATTGAGGT...TATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CTGGTAGTTCTGATAGATGGTCTCCTCCATGTTGACCTCAAAGGGGCCGGCCGAGGTCACGCTGCCGCATaGCCCGCTCTGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LVVLIDGLLHVDLKGAGRGHAAA*PALLPP
Trigger: GGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACC...TCGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCATCTATCAGAACTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTGGTCACGCTGCCGCATaGCCCGCTCTGCTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASGHAAA*PALLPP
Trigger: GGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACC...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACAAGTTCTTGAAGCGGTaGTGGATCTCCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HDSHPTPATEEPRTLRWHKFLKR*WISSRG
Trigger: CCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTT...GTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GAAGTTCTTGAAGCGGTGGTGGATCTCCAGCCGGGGGCCCGCCATGCTCACCCACGTACTTGGGGTACATaGCCAGTACCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: EVLEAVVDLQPGARHAHPRTWGT*PVPPPG
Trigger: CCCTGGAGGTGGTACTGGCCATGTACCCCAAGTACG...TGGGTGAGCATGGCGGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GAGCGGGGCAGCCGGCCAGCCGCCACTTTGCCTGGACTCTCCTGGATTCGGATATTCACCTCCTGGTTCTaGGACTGGCAGAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: ERGSRPAATLPGLSWIRIFTSWF*DWQKGP
Trigger: GGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAA...TATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCGGCTGCCCCGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCCTTGTTGTCCTTCTTaGCCACGTGGTTGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: HPTPATEEPRTLRWHCRAPCCPS*PRGWLG
Trigger: TCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGG...GGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTTCCTTGTTGCTGGGGTaGTGTCTGACGTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGSLLLG*CLTWLP
Trigger: GGGCAGCCACGTCAGACACCACCCCAGCAACAAGGA...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp ATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCAGATGGATGCGCGCGTaGGCCTCCGCCATGCGGATC +
Preference number: 4 (lower is better)
Translates to: IIRMTHIPPLRLRSPERCRWMRA*ASAMRI
Trigger: GATCCGCATGGCGGAGGCCCACGCGCGCATCCATCT...GCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp AGGCAGCAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCGGCCAGGGCTGGAGGTaGGAGGATCATTGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RQQKQPEYATHAKRAAALGQGWR*EDHCLA
Trigger: GGCGAGGCAATGATCCTCTCACCTCCAGCCCTGGCC...GAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCTCTGCTGCCTCCCTCTaGCTGGCCGTCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLSAASL*LAVSSS
Trigger: AGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGA...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCGAGCCAGGCCTCTCTTaGTGTCTTCATGACCATAGA +
Preference number: 4 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVEPGLS*CLHDHR
Trigger: TCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTC...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCGCACAAGAGCACGTTaGTATCACCACGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVRTRAR*YHHVPC
Trigger: ACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCG...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCGCTGGACATACGCCGTaGGGCCCACAGCCGACGCCC +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPAGHTP*GPQPTP
Trigger: GGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCAGC...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATAGGTTGGCGGCAGCAATaGCCGTGCAGCGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIGWRQQ*PCSEPA
Trigger: TGCAGGCTCGCTGCACGGTCATTGCTGCCGCCAACC...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGCAGGATGTCAAAGCGTaGGATGATGGGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LRSPERCAGTVVPSSTTGQDVKA*DDGLCE
Trigger: CTCACAGAGCCCATCATCTCACGCTTTGACATCCTG...CCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCGCCTCCCGGTCACGCTaGCGCATGGCCCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGASRSR*RMARSA
Trigger: AGCAGAGCGGGCCATGCGGCAGCGTGACCGGGAGGC...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp CTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGCCTCCAGGTTCTCGATaGTCTCGATCATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LRSPERCAGTVVPSSTTGPPGSR*SRSSPR
Trigger: ACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGG...CCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCCACGTGCTCCCTGGCTaGCAAGTCCTCATAGTTCAC +
Preference number: 4 (lower is better)
Translates to: GLQLSTRSARRMASLERGHVLPG*QVLIVH
Trigger: GTGAACTATGAGGACTTGGCAGCCAGGGAGCACGTG...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCAGCTGCTGTCCACCAGATCTaGGAGGAGAATGGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: PHWCGSAGSDAAASASAAAVHQI*EENGVL
Trigger: AAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGC...AGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp TGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCTCCCTGCTGACAGGGTaGCGCTGGACATACGCCGTG +
Preference number: 4 (lower is better)
Translates to: CGEWIIRMTHIPPLRLRSSLLTG*RWTYAV
Trigger: CACGGCGTATGTCCAGCGGCACCCTGTCAGCAGGGA...GCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GTGGCCTTTGAGATCCTCCAGGTTCTCGATGCTCTCGATCATCTCCTCGTCCTCCGGGCTCAGCAGCGCTaGCATTGGCCAGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: VAFEILQVLDALDHLLVLRAQQR*HWPAPP
Trigger: AGGAGGGGCTGGCCAATGGCAGCGCTGCTGAGCCCG...GAGGACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGGATCTCAAAGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TCTCCGCACAAGAGCACGTTGATATCACCACGTACCTTGTGCTTGCCACCTGGGTTGCCTCGCCGACGCTaGGCCGGGCTGGATGCCATG +
Preference number: 4 (lower is better)
Translates to: SPHKSTLISPRTLCLPPGLPRRR*AGLDAM
Trigger: CATGGCATCCAGCCCGGCCCAGCGTCGGCGAGGCAA...CCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTAAGTTCTTGAAGCGGTaGTGGATCTCCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGKFLKR*WISSRG
Trigger: CCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTT...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACTGGGTCATGCGGACATGGATGTaGTTGGTGATGCGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: SDVAAHHEAGQHLVLDWVMRTWM*LVMRSY
Trigger: GTACGACCGCATCACCAACCACATCCATGTCCGCAT...GACCCAGTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp CCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCCTGGTTTCACCTCCTaGTTCTGGGACTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PATEEPRTLRWHCRALFHPGFTS*FWDWQK
Trigger: TTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGG...GTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATAAAGGGGCCGGCCGACTaGCACTCAGGACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIKGPAD*HSGQEP
Trigger: AGGCTCCTGTCCTGAGTGCCAGTCGGCCGGCCCCTT...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AAAGGCAGCAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCGGAGAATGGCGTCCTTaGAGCGGGGCAGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: KGSKSSLNTQLTPRGQQLGEWRP*SGAAGQ
Trigger: CTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCC...GAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTGCTGCCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GAAGTTCTTGAAGCGGTGGTGGATCTCCAGCCGGGGGCCCGCCATGCTCACCCACTCTATCTCGTCTCCTaGCTTGCAGCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: EVLEAVVDLQPGARHAHPLYLVS*LAAVHQ
Trigger: CTGGTGGACAGCTGCAAGCCAGGAGACGAGATAGAG...TGGGTGAGCATGGCGGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACTGGGTCTCCTTCTTGGCCACGTaGTTGGCTAGGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: SDVAAHHEAGQHLVLDWVSFLAT*LARMTV
Trigger: CACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGA...GACCCAGTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp GATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGCTGACAGGGTGCCGCTaGACATACGCCGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: DADMDVVGDAVVLGVHGQLTGCR*TYAVRP
Trigger: GGGCCTCACGGCGTATGTCCAGCGGCACCCTGTCAG...CTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp ATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTGGCCTCATGGATGCTaGTTCTGTCCTGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: IPPLRLRSPERCAGTVVPWPHGC*FCPGHS
Trigger: TGAATGACCAGGACAGAACCAGCATCCATGAGGCCA...GGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp TCTCCGCACAAGAGCACGTTGATATCACCACGTACCTTGTGCTTGCCACCTGGGGGCCAGGGCTGGAGGTaGGAGGATCATTGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SPHKSTLISPRTLCLPPGGQGWR*EDHCLA
Trigger: GGCGAGGCAATGATCCTCTCACCTCCAGCCCTGGCC...CCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR TCA 90 bp GTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACAGCCATTGGCAGTGTTaGGGGAGCCATCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: VVSDVAAHHEAGQHLVLDSHWQC*GSHHSC
Trigger: ACAACTATGATGGCTCCCTCAACACTGCCAATGGCT...GTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR TCA 90 bp CAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCCTGACAGGTTGGCGGCAGCAATaGCCGTGCAGCGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QKQPEYATHAKRAAALLTGWRQQ*PCSEPA
Trigger: TGCAGGCTCGCTGCACGGTCATTGCTGCCGCCAACC...TGTCAGGAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp GAAGTTCTTGAAGCGGTGGTGGATCTCCAGCCGGGGGCCCGCCATGCTCACCCACAGGATGTCAAAGCGTaGGATGATGGGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: EVLEAVVDLQPGARHAHPQDVKA*DDGLCE
Trigger: CTCACAGAGCCCATCATCTCACGCTTTGACATCCTG...TGGGTGAGCATGGCGGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR TCA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGTGCTGGGGTGGTGTCTaGCGTGGCTGCCCACCACGA +
Preference number: 4 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLCWGGV*RGCPPR
Trigger: TCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCA...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCGCATGGCCCGCTCTaGTGCCTCCCTCTGACTGGC +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGPHGPL*CLPLTG
Trigger: GCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCCGGGGGCCCGCCATaGTCACCCACTCGCGCACAG +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKAGGPP*SPTRAQ
Trigger: CTGTGCGCGAGTGGGTGAGCATGGCGGGCCCCCGGC...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TCTCCGCACAAGAGCACGTTGATATCACCACGTACCTTGTGCTTGCCACCTGGGCAGCAGCTCCGCCGGTaGCTCAGGCAGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: SPHKSTLISPRTLCLPPGQQLRR*LRQEVG
Trigger: GCCTACTTCCTGCCTGAGGCACCGGCGGAGCTGCTG...CCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ATACTTGAGAAACTGCGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTGGGGCAGGACGCCAGTaGAGCTGGTCACCACCCCAC +
Preference number: 4 (lower is better)
Translates to: ILEKLRLRCARVSAQEHVGAGRQ*SWSPPH
Trigger: GTGGGGTGGTGACCAGCTGCACTGGCGTCCTGCCCC...AACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGGCCAGCCGCCACTTTaGCTGGACTCTCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: RQVGDADMDVVGDAVVLGGQPPL*LDSPGF
Trigger: GAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCC...CCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGACCGTGCAGCGAGCCTaGAGGGAGGTGACGATGCCA +
Preference number: 4 (lower is better)
Translates to: DADMDVVGDAVVLGVHGQTVQRA*REVTMP
Trigger: TGGCATCGTCACCTCCCTGCAGGCTCGCTGCACGGT...CTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATATCATGGACTCGATGTaGCGCACCGTAATGGGGATG +
Preference number: 4 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDIMDSM*RTVMGM
Trigger: CATCCCCATTACGGTGCGGCACATCGAGTCCATGAT...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAAGTCCCGCAGATGGATaGGCGCGTGGGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQSPADG*ARGPPP
Trigger: TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACT...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAGTCCCGCAGATGGATaGGCGCGTGGGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPSPADG*ARGPPP
Trigger: TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACT...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCTTGCCTCGCCGACGCTaGGCCGGGCTGGATGCCATG +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGLPRRR*AGLDAM
Trigger: CATGGCATCCAGCCCGGCCCAGCGTCGGCGAGGCAA...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATCCTGGTTTCACCTCCTaGTTCTGGGACTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDPGFTS*FWDWQK
Trigger: TTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGG...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGGGAGAATGGCGTCCTTaGAGCGGGGCAGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LSFLATWLARMTVAKTGKGEWRP*SGAAGQ
Trigger: CTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCC...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGATCTGCGAGGAGAATaGCGTCCTTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RQVGDADMDVVGDAVVLGDLRGE*RPWSGA
Trigger: TGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATC...CCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCCATCTCGTCCTGGACTaGGTCCACGGTGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLHLVLD*VHGVPH
Trigger: GTGAGGGACACCGTGGACCCAGTCCAGGACGAGATG...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp GAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAAGCCAGCATCTCGTCCTaGACTGGGTCCACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EWIIRMTHIPPLRLRSPEASISS*TGSTVS
Trigger: GGACACCGTGGACCCAGTCCAGGACGAGATGCTGGC...TTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCTCCTTGTTGCTGGGGTaGTGTCTGACGTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLSLLLG*CLTWLP
Trigger: GGGCAGCCACGTCAGACACCACCCCAGCAACAAGGA...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACATACGTGTTGGGCATaGCGGGCTCAGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: EWIIRMTHIPPLRLRSPEHTCWA*RAQQRC
Trigger: GCAGCGCTGCTGAGCCCGCCATGCCCAACACGTATG...TTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp CAGGGCCAGAGCCAGGCCTCTCTTGATGTCTTCATGACCATAGATGGAAGGAGCAGATGGATGCGCGCGTaGGCCTCCGCCATGCGGATC +
Preference number: 4 (lower is better)
Translates to: QGQSQASLDVFMTIDGRSRWMRA*ASAMRI
Trigger: GATCCGCATGGCGGAGGCCCACGCGCGCATCCATCT...GCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTaGGGGTACATGGCCAGTACCACCTCCAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: MRTWMWLVMRSY*GYMASTTSRAA
Trigger: GGCTGCCCTGGAGGTGGTACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAGGCCAGGGCTGGAGGTaGGGGCATCAGTACGCCGGG +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVGQGWR*GHQYAG
Trigger: CCCGGCGTACTGATGCCCTCACCTCCAGCCCTGGCC...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTTGGTCTCCTCCATGTTaGCCTCAAAGGGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASWSPPC*PQRGRP
Trigger: CGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCA...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGTGGGCCTCCGCCACGCACAAGAGCACGTTaGTATCACCACGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: RRLRSHSPADGCARGPPPRTRAR*YHHVPC
Trigger: ACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCG...TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCGGTTGGCGGCAGCAATaGCCGTGCAGCGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GMLPVAIDSFLRSLYILAGWRQQ*PCSEPA
Trigger: TGCAGGCTCGCTGCACGGTCATTGCTGCCGCCAACC...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp TGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAAAGCGGTTGCGCTaGTATGTCACCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CGEWIIRMTHIPPLRLRSPKRLR*YVTCSA
Trigger: GGCAGAGCAGGTGACATATCAGCGCAACCGCTTTGG...GCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp CCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACAGAGGTTGTGGATGTTaGTCTGACGAGCCTTATCCA +
Preference number: 4 (lower is better)
Translates to: PATEEPRTLRWHCRALFHRGCGC*SDEPYP
Trigger: TGGATAAGGCTCGTCAGATCAACATCCACAACCTCT...GTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCCATGGCCCGCTCTGCTaGCTCCCTCTGACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPHGPLC*LPLTGR
Trigger: ACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATG...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGCATGGCCCGCTCTGCTaGCTCCCTCTGACTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LSFLATWLARMTVAKTGKHGPLC*LPLTGR
Trigger: ACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATG...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAAGCCTCCCGGTCACGCTaGCGCATGGCCCGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GKSLAHAAHDAELLCVYEASRSR*RMARSA
Trigger: AGCAGAGCGGGCCATGCGGCAGCGTGACCGGGAGGC...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGGGGGCAGGACGCCAGTaGAGCTGGTCACCACCCCAC +
Preference number: 4 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKGAGRQ*SWSPPH
Trigger: GTGGGGTGGTGACCAGCTGCACTGGCGTCCTGCCCC...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCGGGGCAGGACGCCAGTaGAGCTGGTCACCACCCCAC +
Preference number: 4 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGGAGRQ*SWSPPH
Trigger: GTGGGGTGGTGACCAGCTGCACTGGCGTCCTGCCCC...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CCCTCCTCCTCCTTGTTGCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGTCACCACGTACCTTGTaGTTGCCACCTGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PSSSLLLGWCLTWLPTTKSPRTL*LPPGFL
Trigger: CAAAAACCCAGGTGGCAAGCACAAGGTACGTGGTGA...CTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCACTGCGACTTCGCTGTaGCAGGGTCTCCGCACAAGA +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLTATSL*QGLRTR
Trigger: TCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGT...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGTCCCTGCTGACAGGGTaGCGCTGGACATACGCCGTG +
Preference number: 4 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLSLLTG*RWTYAV
Trigger: CACGGCGTATGTCCAGCGGCACCCTGTCAGCAGGGA...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGTGGGCCTCCGCCAATGGAGATGCTCTGTTaGTCCATGGCCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: RRLRSHSPADGCARGPPPMEMLC*SMASWM
Trigger: CATCCATGAGGCCATGGAGCAACAGAGCATCTCCAT...TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CTGGTAGTTCTGATAGATGGTCTCCTCCATGTTGACCTCAAAGGGGCCGGCCGAACCGTGCAGCGAGCCTaGAGGGAGGTGACGATGCCA +
Preference number: 4 (lower is better)
Translates to: LVVLIDGLLHVDLKGAGRTVQRA*REVTMP
Trigger: TGGCATCGTCACCTCCCTGCAGGCTCGCTGCACGGT...TCGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCATCTATCAGAACTACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGCGGGCTCAGCAGCGCTaGCATTGGCCAGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: RHPAISPDPSTPSSSSALRAQQR*HWPAPP
Trigger: AGGAGGGGCTGGCCAATGGCAGCGCTGCTGAGCCCG...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGCGGGCTCAGCAGCGCTaGCATTGGCCAGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: TRIPRNPYGWHRASELLQRAQQR*HWPAPP
Trigger: AGGAGGGGCTGGCCAATGGCAGCGCTGCTGAGCCCG...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTAGGGCCCCAAAGCGGTTaGGCTGATATGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: HQRQVGDADMDVVGDAVVGPQSG*ADMSPA
Trigger: AGCAGGTGACATATCAGCGCAACCGCTTTGGGGCCC...TACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATAATAGGCGTCCAGCTCTaGGATGGCGCGGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIIGVQL*DGAVVP
Trigger: AGGGACTACCGCGCCATCCCAGAGCTGGACGCCTAT...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACTGCCTCCCTCTGACTaGCCGTCAGCTCCTCTACGT +
Preference number: 4 (lower is better)
Translates to: EWIIRMTHIPPLRLRSPELPPSD*PSAPLR
Trigger: ACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAG...TTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTCCTGGTTTCACCTCCTaGTTCTGGGACTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGPGFTS*FWDWQK
Trigger: TTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGG...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGGGAGAATGGCGTCCTTaGAGCGGGGCAGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALGEWRP*SGAAGQ
Trigger: CTGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCC...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGATCTGCGAGGAGAATaGCGTCCTTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARDLRGE*RPWSGA
Trigger: TGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATC...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCTGCCACCTGGGTTTTTaGGCTCCCCTCCGAACAGGG +
Preference number: 4 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARCHLGF*APLRTG
Trigger: CCCTGTTCGGAGGGGAGCCCAAAAACCCAGGTGGCA...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATATGCCACCTGGGTTTTTaGGCTCCCCTCCGAACAGGG +
Preference number: 4 (lower is better)
Translates to: RRPLASGEDGSAGHFLNICHLGF*APLRTG
Trigger: CCCTGTTCGGAGGGGAGCCCAAAAACCCAGGTGGCA...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAGGGTGGTGTCTGACGTaGCTGCCCACCACGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPGWCLT*LPTTKR
Trigger: CCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCC...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp ATACTTGAGAAACTGCGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTGGGTGGTGTCTGACGTaGCTGCCCACCACGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ILEKLRLRCARVSAQEHVGWCLT*LPTTKR
Trigger: CCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCC...AACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCGGGTGGTGTCTGACGTaGCTGCCCACCACGAAGCGG +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPGWCLT*LPTTKR
Trigger: CCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCC...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CAGGGCCAGAGCCAGGCCTCTCTTGATGTCTTCATGACCATAGATGGAAGGAGCCCGCCATGCGGATCATaGACTCGATGTGCCGCACCG +
Preference number: 4 (lower is better)
Translates to: QGQSQASLDVFMTIDGRSPPCGS*TRCAAP
Trigger: CGGTGCGGCACATCGAGTCCATGATCCGCATGGCGG...GCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp TCTCCGCACAAGAGCACGTTGATATCACCACGTACCTTGTGCTTGCCACCTGGGCCGTGGCTGTCGACGTaGGTGCGCAGGAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SPHKSTLISPRTLCLPPGPWLST*VRRKFL
Trigger: CAAGAACTTCCTGCGCACTCACGTCGACAGCCACGG...CCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGCCCCCTGGCCAGTGGTaGAGATGGCTCGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKPPGQW*RWLGWT
Trigger: TGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGG...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAGGTCCACTCCCTGCTaGCAGGGTGCCGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPRSTPC*QGAAGH
Trigger: ATGTCCAGCGGCACCCTGTCAGCAGGGAGTGGACCT...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp CTGGTAGTTCTGATAGATGGTCTCCTCCATGTTGACCTCAAAGGGGCCGGCCGACCTGGTCCATCTGGTTaGGCTTCGGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: LVVLIDGLLHVDLKGAGRPGPSG*ASGGPS
Trigger: AGAGGGTCCACCCGAAGCTCAACCAGATGGACCAGG...TCGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCATCTATCAGAACTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp ACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCTTGTGGATGTTGATCTaGCGAGCCTTATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: TTPLVRISWFRCSCLSERLWMLI*RALSTK
Trigger: CTTGGTGGATAAGGCTCGTCAGATCAACATCCACAA...GCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTCTGGGCCGGGCTGGATaGCATGGTGAAGGATTCCGA +
Preference number: 4 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASLGRAG*HGEGFR
Trigger: TCGGAATCCTTCACCATGGCATCCAGCCCGGCCCAG...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR GCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGACCACCTGGCGGCGCTTaGGGGCAGGGCGCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRPPGGA*GQGAPR
Trigger: ACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGG...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AAAGCACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGCAGCAGCTCCGCCGGTaGCTCAGGCAGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: KAQRALTTPNQNPKESLWQQLRR*LRQEVG
Trigger: GCCTACTTCCTGCCTGAGGCACCGGCGGAGCTGCTG...CCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGTCCCTGCTGACAGGGTaGCGCTGGACATACGCCGTG +
Preference number: 4 (lower is better)
Translates to: LSFLATWLARMTVAKTGKSLLTG*RWTYAV
Trigger: CACGGCGTATGTCCAGCGGCACCCTGTCAGCAGGGA...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAACGGGCTCAGCAGCGCTaGCATTGGCCAGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKRAQQR*HWPAPP
Trigger: AGGAGGGGCTGGCCAATGGCAGCGCTGCTGAGCCCG...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGCGTGGGCCTCCGCCATaGGGATCATGGACTCGATGT +
Preference number: 4 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLRGPPP*GSWTRC
Trigger: ACATCGAGTCCATGATCCGCATGGCGGAGGCCCACG...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ATGTCAAAGCGTGAGATGATGGGCTCTGTGAGGTCCACGTTCTCAGAGAAAGTCAGTCCCGCAGATGGATaGGCGCGTGGGCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: MSKREMMGSVRSTFSEKVSPADG*ARGPPP
Trigger: TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACT...GACTTTCTCTGAGAACGTGGACCTCACAGAGCCCATCATCTCACGCTTTGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp CTGGTAGTTCTGATAGATGGTCTCCTCCATGTTGACCTCAAAGGGGCCGGCCGACTGCCTCCCTCTGACTaGCCGTCAGCTCCTCTACGT +
Preference number: 4 (lower is better)
Translates to: LVVLIDGLLHVDLKGAGRLPPSD*PSAPLR
Trigger: ACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAG...TCGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCATCTATCAGAACTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAATTCTTGAAGCGGTGGTaGATCTCCAGCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQFLKRW*ISSRGP
Trigger: GGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAA...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCTTCTTGAAGCGGTGGTaGATCTCCAGCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GMLPVAIDSFLRSLYILAFLKRW*ISSRGP
Trigger: GGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAA...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCTTCTTGAAGCGGTGGTaGATCTCCAGCCGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGFLKRW*ISSRGP
Trigger: GGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAA...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AGGCAGCAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCCGTACTTGGGGTACATaGCCAGTACCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQQKQPEYATHAKRAAALRTWGT*PVPPPG
Trigger: CCCTGGAGGTGGTACTGGCCATGTACCCCAAGTACG...GAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTGGTGCGGATCAGCTaGTTCAGATGCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RRPLASGEDGSAGHFLNILVRIS*FRCSCL
Trigger: GAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAG...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTTTGACCATGCTGAGCTaGGGCAGGACGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASLTMLS*GRTPVQ
Trigger: CTGCACTGGCGTCCTGCCCCAGCTCAGCATGGTCAA...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGACAGCCGACGCCCCCTaGCCAGTGGTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGTADAP*PVVKMA
Trigger: AGCCATCTTCACCACTGGCCAGGGGGCGTCGGCTGT...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAGCCAGCATCTCGTCCTaGACTGGGTCCACGGTGTCC +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPASISS*TGSTVS
Trigger: GGACACCGTGGACCCAGTCCAGGACGAGATGCTGGC...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCCCACGCCATACGTGTTaGGCATGGCGGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGPRHTC*AWRAQQ
Trigger: CTGCTGAGCCCGCCATGCCCAACACGTATGGCGTGG...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCCCACGCCATACGTGTTaGGCATGGCGGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPPRHTC*AWRAQQ
Trigger: CTGCTGAGCCCGCCATGCCCAACACGTATGGCGTGG...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCGCCATGCGGATCATaGACTCGATGTGCCGCACCG +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGPPCGS*TRCAAP
Trigger: CGGTGCGGCACATCGAGTCCATGATCCGCATGGCGG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCCAGAACGCTGCGCTaGCACTGTCGTGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGPRTLR*HCRALF
Trigger: GAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR CAA 72 bp ACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTaGGTGATGCGGTCGTACTTGGGGTACATGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TRGRWEMRTWMW*VMRSYLGYMAS
Trigger: ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp GACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTaGATATCACCACGTACCTTGTGCTTGCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: DFAVPGSPHKST*ISPRTLCLPPG
Trigger: CCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTTGGTCTCCTCCATGTTaGCCTCAAAGGGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVWSPPC*PQRGRP
Trigger: CGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCA...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp ATGTCAAAGCGTGAGATGATGGGCTCTGTGAGGTCCACGTTCTCAGAGAAAGTCCCCCCTGGCCAGTGGTaGAGATGGCTCGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: MSKREMMGSVRSTFSEKVPPGQW*RWLGWT
Trigger: TGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGG...GACTTTCTCTGAGAACGTGGACCTCACAGAGCCCATCATCTCACGCTTTGACAT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR TCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGGTTGGCGGCAGCAATaGCCGTGCAGCGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKGWRQQ*PCSEPA
Trigger: TGCAGGCTCGCTGCACGGTCATTGCTGCCGCCAACC...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTAGAGGTTGTGGATGTTaGTCTGACGAGCCTTATCCA +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGRGCGC*SDEPYP
Trigger: TGGATAAGGCTCGTCAGATCAACATCCACAACCTCT...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGCCTCCAGGTTCTCGATaGTCTCGATCATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: RQVGDADMDVVGDAVVLGPPGSR*SRSSPR
Trigger: ACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGG...CCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCAGCAGCTCCGCCGGTaGCTCAGGCAGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCQQLRR*LRQEVG
Trigger: GCCTACTTCCTGCCTGAGGCACCGGCGGAGCTGCTG...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCGCCTCATCAAAGATCTaGAGCAGCTCCGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCASSKI*SSSAGA
Trigger: GGCACCGGCGGAGCTGCTGCAGATCTTTGATGAGGC...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCGGCCAGCCGCCACTTTaGCTGGACTCTCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPGQPPL*LDSPGF
Trigger: GAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCC...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCAGCTAGATGGAAGGAGCAATaGTGGCAAAGATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PHWCGSAGSDAAASASAARWKEQ*WQRSSL
Trigger: GAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCT...AGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTACCGTGCAGCGAGCCTaGAGGGAGGTGACGATGCCA +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVTVQRA*REVTMP
Trigger: TGGCATCGTCACCTCCCTGCAGGCTCGCTGCACGGT...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCGTGGGCCTCCGCCATaGGGATCATGGACTCGATGT +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGRGPPP*GSWTRC
Trigger: ACATCGAGTCCATGATCCGCATGGCGGAGGCCCACG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR GCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTAGGAGCCCAGAACGCTaGGCTGGCACTGTCGTGCCC +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCRSPER*AGTVVP
Trigger: GGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCT...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCCGTCCAGCTCTGGGATaGCGCGGTAGTCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: GMLPVAIDSFLRSLYILARPALG*RGSPFP
Trigger: TGGAAAGGGACTACCGCGCCATCCCAGAGCTGGACG...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATATAGGCGTCCAGCTCTaGGATGGCGCGGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHIGVQL*DGAVVP
Trigger: AGGGACTACCGCGCCATCCCAGAGCTGGACGCCTAT...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GTGGCCTTTGAGATCCTCCAGGTTCTCGATGCTCTCGATCATCTCCTCGTCCTCCCAGCACGTGCTCCCTaGCTGCCAAGTCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VAFEILQVLDALDHLLVLPARAP*LPSPHS
Trigger: ACTATGAGGACTTGGCAGCCAGGGAGCACGTGCTGG...GAGGACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGGATCTCAAAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTGGGAGATGCGGACATaGATGTGGTTGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: DADMDVVGDAVVLGVHGQWEMRT*MWLVMR
Trigger: CCGCATCACCAACCACATCCATGTCCGCATCTCCCA...CTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCCTGACATGGTCACCACCCCACTaGTGCGGATCAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: QKQPEYATHAKRAAALLTWSPPH*CGSAGS
Trigger: TGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCA...TGTCAGGAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTTGGTCACCACCCCACTaGTGCGGATCAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASWSPPH*CGSAGS
Trigger: TGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCA...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCCTGACATCCTGGTTCTGGGACTaGCAGAAAGGACCCAGGACG +
Preference number: 4 (lower is better)
Translates to: QKQPEYATHAKRAAALLTSWFWD*QKGPRT
Trigger: CGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGA...TGTCAGGAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAAAGGGGCCGGCCGACTaGCACTCAGGACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKKGPAD*HSGQEP
Trigger: AGGCTCCTGTCCTGAGTGCCAGTCGGCCGGCCCCTT...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAAAGCCGCCACTTTGCCTaGACTCTCCTGGATTCGGAT +
Preference number: 4 (lower is better)
Translates to: EWIIRMTHIPPLRLRSPESRHFA*TLLDSD
Trigger: ATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCT...TTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCGATCTGCGAGGAGAATaGCGTCCTTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGDLRGE*RPWSGA
Trigger: TGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATC...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTATCCTTCTTGGCCACGTaGTTGGCTAGGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: HQRQVGDADMDVVGDAVVSFLAT*LARMTV
Trigger: CACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGA...TACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCATGCCACCTGGGTTTTTaGGCTCCCCTCCGAACAGGG +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPCHLGF*APLRTG
Trigger: CCCTGTTCGGAGGGGAGCCCAAAAACCCAGGTGGCA...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCTGACAGGGTGCCGCTaGACATACGCCGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCLTGCR*TYAVRP
Trigger: GGGCCTCACGGCGTATGTCCAGCGGCACCCTGTCAG...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTGACAGGGTGCCGCTaGACATACGCCGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HRASELLQDHFPFQVVAELTGCR*TYAVRP
Trigger: GGGCCTCACGGCGTATGTCCAGCGGCACCCTGTCAG...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACTGACAGGGTGCCGCTaGACATACGCCGTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRLTGCR*TYAVRP
Trigger: GGGCCTCACGGCGTATGTCCAGCGGCACCCTGTCAG...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCCATCTCGTCCTGGACTaGGTCCACGGTGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGHLVLD*VHGVPH
Trigger: GTGAGGGACACCGTGGACCCAGTCCAGGACGAGATG...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGCATACGTGTTGGGCATaGCGGGCTCAGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RHPAISPDPSTPSSSSALHTCWA*RAQQRC
Trigger: GCAGCGCTGCTGAGCCCGCCATGCCCAACACGTATG...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp ATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGGTCACTGTACATCTTaGCCACCTTGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: IIRMTHIPPLRLRSPERCGHCTS*PPCPGP
Trigger: TGGACCAGGACAAGGTGGCCAAGATGTACAGTGACC...GCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCGGTCACTGTACATCTTaGCCACCTTGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLGHCTS*PPCPGP
Trigger: TGGACCAGGACAAGGTGGCCAAGATGTACAGTGACC...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGCCGCCATGCGGATCATaGACTCGATGTGCCGCACCG +
Preference number: 4 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALPPCGS*TRCAAP
Trigger: CGGTGCGGCACATCGAGTCCATGATCCGCATGGCGG...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAAGATGGATGCGCGCGTaGGCCTCCGCCATGCGGATC +
Preference number: 4 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKRWMRA*ASAMRI
Trigger: GATCCGCATGGCGGAGGCCCACGCGCGCATCCATCT...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTAGGAATCCTTATGGATaGCATAGGGCCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGRNPYG*HRASEL
Trigger: CAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCT...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp GGACCCAGGACGAAATTGCACTTGTTGCAGTTGTACTaGACCATGCTGAGCTGGGGCAGGACGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GPRTKLHLLQLY*TMLSWGRTPVQ
Trigger: CTGCACTGGCGTCCTGCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCATCTGCTGCCTCCCTCTaGCTGGCCGTCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPSAASL*LAVSSS
Trigger: AGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGA...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGCCGTGGCTGTCGACGTaGGTGCGCAGGAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: TRIPRNPYGWHRASELLQPWLST*VRRKFL
Trigger: CAAGAACTTCCTGCGCACTCACGTCGACAGCCACGG...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCCGTGGCTGTCGACGTaGGTGCGCAGGAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVPWLST*VRRKFL
Trigger: CAAGAACTTCCTGCGCACTCACGTCGACAGCCACGG...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCATGGTCTCCTCCATGTTaGCCTCAAAGGGGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: VPRVHQVLWFCVHKAQRAWSPPC*PQRGRP
Trigger: CGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCA...TGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp CTGAAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGCAGCAAAAGGCTGGACATACGCCGTaGGGCCCACAGCCGACGCCC +
Preference number: 4 (lower is better)
Translates to: LKTITNIFNQLSGQRQQKAGHTP*GPQPTP
Trigger: GGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCAGC...CTTTTGCTGCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAGAGCCTGCAGGGAGGTaGCGATGCCAGCCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTEPAGR*RCQPSR
Trigger: TCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCTC...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCGAGCCTGCAGGGAGGTaGCGATGCCAGCCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: HSCCDRCQSALSRLLACSEPAGR*RCQPSR
Trigger: TCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCTC...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp ACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGTGCTGGGGTGGTGTCTaGCGTGGCTGCCCACCACGA +
Preference number: 4 (lower is better)
Translates to: TLVPRVHQVLWFCVHKAQCWGGV*RGCPPR
Trigger: TCGTGGTGGGCAGCCACGTCAGACACCACCCCAGCA...CTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGCCTGGTCCATCTGGTTaGGCTTCGGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALPGPSG*ASGGPS
Trigger: AGAGGGTCCACCCGAAGCTCAACCAGATGGACCAGG...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGGTTGTCACGCCGGAATaGAAGGTAGCGGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: DADMDVVGDAVVLGVHGQVVTPE*KVAGKS
Trigger: ACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAAC...CTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCAAAGCGGTTGCGCTaGTATGTCACCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGPKRLR*YVTCSA
Trigger: GGCAGAGCAGGTGACATATCAGCGCAACCGCTTTGG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR TCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCCCAAAGCGGTTGCGCTaGTATGTCACCTGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGPKRLR*YVTCSA
Trigger: GGCAGAGCAGGTGACATATCAGCGCAACCGCTTTGG...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp CAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCCTGACAGGGCAGCAGCTCTCCTaGCATCCATGTAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: QKQPEYATHAKRAAALLTGQQLS*HPCKKA
Trigger: AGCCTTCTTACATGGATGTCAGGAGAGCTGCTGCCC...TGTCAGGAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCCCTCCAGGTTCTCGATaGTCTCGATCATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARPPGSR*SRSSPR
Trigger: ACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGG...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTCACGTGCTCCCTGGCTaGCAAGTCCTCATAGTTCAC +
Preference number: 4 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASHVLPG*QVLIVH
Trigger: GTGAACTATGAGGACTTGGCAGCCAGGGAGCACGTG...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AAAGCACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGGCCTCATCAAAGATCTaGAGCAGCTCCGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: KAQRALTTPNQNPKESLWASSKI*SSSAGA
Trigger: GGCACCGGCGGAGCTGCTGCAGATCTTTGATGAGGC...CCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCTGGTTCAGATGCAGCTaGCTCAGCGAGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGWFRCS*LSERSS
Trigger: GGAGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCA...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CTGGTAGTTCTGATAGATGGTCTCCTCCATGTTGACCTCAAAGGGGCCGGCCGATCACCACCCCACTGGTaGGGATCAGCTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LVVLIDGLLHVDLKGAGRSPPHW*GSAGSD
Trigger: ATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGA...TCGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCATCTATCAGAACTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CTGGTAGTTCTGATAGATGGTCTCCTCCATGTTGACCTCAAAGGGGCCGGCCGATCTCGTCTCCTGGCTTaGAGCTGTCCACCAGATCTG +
Preference number: 4 (lower is better)
Translates to: LVVLIDGLLHVDLKGAGRSRLLA*SCPPDL
Trigger: CAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGA...TCGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCATCTATCAGAACTACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATAGTTGTTGTGATAGATaGCAGTCAGCTCTATCTCGT +
Preference number: 4 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDSCCDR*QSALSR
Trigger: ACGAGATAGAGCTGACTGGCATCTATCACAACAACT...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTTCCCTGCTGACAGGGTaGCGCTGGACATACGCCGTG +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCSLLTG*RWTYAV
Trigger: CACGGCGTATGTCCAGCGGCACCCTGTCAGCAGGGA...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GCTGGTCACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGTGCTCTGCCACTAACTaGTTCAGTATGAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: AGHHPTGADQLVQMQLPQCSATN*FSMKSN
Trigger: GTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCA...CTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATGGGCCCCAAAGCGGTTaGGCTGATATGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHGPQSG*ADMSPA
Trigger: AGCAGGTGACATATCAGCGCAACCGCTTTGGGGCCC...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGGGGCCCCAAAGCGGTTaGGCTGATATGTCACCTGCT +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGGPQSG*ADMSPA
Trigger: AGCAGGTGACATATCAGCGCAACCGCTTTGGGGCCC...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CCA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGCGTCCAGCTCTGGGATaGCGCGGTAGTCCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALRPALG*RGSPFP
Trigger: TGGAAAGGGACTACCGCGCCATCCCAGAGCTGGACG...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCACTCGCGCACAGAGTaGCCTTTGAGATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGHSRTE*PLRSSR
Trigger: CCTGGAGGATCTCAAAGGCCACTCTGTGCGCGAGTG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCCACTCGCGCACAGAGTaGCCTTTGAGATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGHSRTE*PLRSSR
Trigger: CCTGGAGGATCTCAAAGGCCACTCTGTGCGCGAGTG...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCAAGTTCTTGAAGCGGTaGTGGATCTCCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGKFLKR*WISSRG
Trigger: CCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTT...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCCTGACATGGGAGATGCGGACATaGATGTGGTTGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: QKQPEYATHAKRAAALLTWEMRT*MWLVMR
Trigger: CCGCATCACCAACCACATCCATGTCCGCATCTCCCA...TGTCAGGAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCTGGTGCGGATCAGCTaGTTCAGATGCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGLVRIS*FRCSCL
Trigger: GAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGTCCTGGTTCTGGGACTaGCAGAAAGGACCCAGGACG +
Preference number: 4 (lower is better)
Translates to: LSFLATWLARMTVAKTGKSWFWD*QKGPRT
Trigger: CGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGA...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCTCCTGGTTCTGGGACTaGCAGAAAGGACCCAGGACG +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGSWFWD*QKGPRT
Trigger: CGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGA...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGGATCTGCGAGGAGAATaGCGTCCTTGGAGCGGGGCA +
Preference number: 4 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKDLRGE*RPWSGA
Trigger: TGCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATC...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGTGCCACCTGGGTTTTTaGGCTCCCCTCCGAACAGGG +
Preference number: 4 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKCHLGF*APLRTG
Trigger: CCCTGTTCGGAGGGGAGCCCAAAAACCCAGGTGGCA...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAACAGCCGACGCCCCCTaGCCAGTGGTGAAGATGGCT +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKTADAP*PVVKMA
Trigger: AGCCATCTTCACCACTGGCCAGGGGGCGTCGGCTGT...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACAATGCTGGTTCTGTCCTaGTCATTCATCTTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: EPRTLRWHCRALFHHRGTMLVLS*SFILSN
Trigger: ATTTGACAAGATGAATGACCAGGACAGAACCAGCAT...TGTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACCACGCCATACGTGTTaGGCATGGCGGGCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: HRASELLQDHFPFQVVAEPRHTC*AWRAQQ
Trigger: CTGCTGAGCCCGCCATGCCCAACACGTATGGCGTGG...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCCTGACATTGTCCTGGTCCATCTaGTTGAGCTTCGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: QKQPEYATHAKRAAALLTLSWSI*LSFGWT
Trigger: GGTCCACCCGAAGCTCAACCAGATGGACCAGGACAA...TGTCAGGAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp CCGAATGCACAAATAAGAGAGTGGGGAAACAGACAGGGAGCAATGGCAGCTGATCCGCCATGCGGATCATaGACTCGATGTGCCGCACCG +
Preference number: 4 (lower is better)
Translates to: PNAQIREWGNRQGAMAADPPCGS*TRCAAP
Trigger: CGGTGCGGCACATCGAGTCCATGATCCGCATGGCGG...ATCAGCTGCCATTGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGCATTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GCTGGTCACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGTTCCTTTTCAGGTCGTaGCTGAACTTGTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: AGHHPTGADQLVQMQLPQFLFRS*LNLFIL
Trigger: CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAA...CTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp AAAGGCAGCAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCCCATGCCATCTCCAATaGGCTCCTCTCCATCCTCTT +
Preference number: 4 (lower is better)
Translates to: KGSKSSLNTQLTPRGQQLPCHLQ*APLHPL
Trigger: AAGAGGATGGAGAGGAGCTCATTGGAGATGGCATGG...GAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTGCTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp GCACAAATAAGAGAGTGGGGAAACAGACAGGGAGCAATGGCAGCTGATAACTGTTCTGCTGCCTCCCTCTaGCTGGCCGTCAGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: AQIREWGNRQGAMAADNCSAASL*LAVSSS
Trigger: AGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGA...ACAGTTATCAGCTGCCATTGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAGCACAGAGTGGCCTTTaGGATCCTCCAGGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPAQSGL*DPPGSR
Trigger: TCGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGC...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATGCACAGAGTGGCCTTTaGGATCCTCCAGGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHAQSGL*DPPGSR
Trigger: TCGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGC...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCTGCGCAGGAAGTTCTTaGAGCGGTGGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: GMLPVAIDSFLRSLYILACAGSS*SGGGSP
Trigger: TGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCA...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTACCGTGGCTGTCGACGTaGGTGCGCAGGAAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVPWLST*VRRKFL
Trigger: CAAGAACTTCCTGCGCACTCACGTCGACAGCCACGG...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGACCCCCTGGCCAGTGGTaGAGATGGCTCGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRPPGQW*RWLGWT
Trigger: TGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGG...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GCACAAATAAGAGAGTGGGGAAACAGACAGGGAGCAATGGCAGCTGATAACTGTAGGTCCACTCCCTGCTaGCAGGGTGCCGCTGGACAT +
Preference number: 4 (lower is better)
Translates to: AQIREWGNRQGAMAADNCRSTPC*QGAAGH
Trigger: ATGTCCAGCGGCACCCTGTCAGCAGGGAGTGGACCT...ACAGTTATCAGCTGCCATTGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp ATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCTCTCCTTGGCGTAGATaGTGTACTTCTTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: IIRMTHIPPLRLRSPERCSPWRR*CTSSGP
Trigger: AGGTCCTGAAGAAGTACATCATCTACGCCAAGGAGA...GCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp CACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTATCTCCTTGGCGTAGATaGTGTACTTCTTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: HQRQVGDADMDVVGDAVVSPWRR*CTSSGP
Trigger: AGGTCCTGAAGAAGTACATCATCTACGCCAAGGAGA...TACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp ATGTCAAAGCGTGAGATGATGGGCTCTGTGAGGTCCACGTTCTCAGAGAAAGTCCCTGGTCCATCTGGTTaGGCTTCGGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: MSKREMMGSVRSTFSEKVPGPSG*ASGGPS
Trigger: AGAGGGTCCACCCGAAGCTCAACCAGATGGACCAGG...GACTTTCTCTGAGAACGTGGACCTCACAGAGCCCATCATCTCACGCTTTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR TCA 90 bp ATACTTGAGAAACTGCGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTCGCGGATGGCCATGTTaGCGTCGTCTTCGATCACAT +
Preference number: 4 (lower is better)
Translates to: ILEKLRLRCARVSAQEHVRGWPC*RRLRSH
Trigger: ATGTGATCGAAGACGACGTCAACATGGCCATCCGCG...AACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACTGGGCCGGGCTGGATaGCATGGTGAAGGATTCCGA +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTLGRAG*HGEGFR
Trigger: TCGGAATCCTTCACCATGGCATCCAGCCCGGCCCAG...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAGCCTCATCAAAGATCTaGAGCAGCTCCGCCGGTGCC +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTASSKI*SSSAGA
Trigger: GGCACCGGCGGAGCTGCTGCAGATCTTTGATGAGGC...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGATGGTTCAGATGCAGCTaGCTCAGCGAGCGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRWFRCS*LSERSS
Trigger: GGAGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCA...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTGGCCAGCCGCCACTTTaGCTGGACTCTCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCGQPPL*LDSPGF
Trigger: GAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCC...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCTCTCGTCTCCTGGCTTaGAGCTGTCCACCAGATCTG +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPSRLLA*SCPPDL
Trigger: CAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGA...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp AGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGATATACTTGAGAAACTaGGACTTCGCTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQVGDADMDVVGDAVVLGIYLRN*DFAVPG
Trigger: CCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTATAT...CCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GATAACTGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGCCATGGCCTCATGGATaGTGGTTCTGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: DNCGEWIIRMTHIPPLRLPWPHG*WFCPGH
Trigger: ATGACCAGGACAGAACCAGCATCCATGAGGCCATGG...CAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAACGTGGGCCTCCGCCATaGGGATCATGGACTCGATGT +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKRGPPP*GSWTRC
Trigger: ACATCGAGTCCATGATCCGCATGGCGGAGGCCCACG...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCACCTCAATAGTGTCCTaGTGGGCCCCAAAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGTSIVS*WAPKRL
Trigger: CAACCGCTTTGGGGCCCAGCAGGACACTATTGAGGT...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGACCTCAATAGTGTCCTaGTGGGCCCCAAAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGTSIVS*WAPKRL
Trigger: CAACCGCTTTGGGGCCCAGCAGGACACTATTGAGGT...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CCA 90 bp CCGAATGCACAAATAAGAGAGTGGGGAAACAGACAGGGAGCAATGGCAGCTGATATAGGCGTCCAGCTCTaGGATGGCGCGGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PNAQIREWGNRQGAMAADIGVQL*DGAVVP
Trigger: AGGGACTACCGCGCCATCCCAGAGCTGGACGCCTAT...ATCAGCTGCCATTGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGCATTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp AAAGCACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGCGTACTTGGGGTACATaGCCAGTACCACCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: KAQRALTTPNQNPKESLWRTWGT*PVPPPG
Trigger: CCCTGGAGGTGGTACTGGCCATGTACCCCAAGTACG...CCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AAAGGCAGCAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCATGCGGACATGGATGTaGTTGGTGATGCGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: KGSKSSLNTQLTPRGQQLMRTWM*LVMRSY
Trigger: GTACGACCGCATCACCAACCACATCCATGTCCGCAT...GAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTGCTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCTGGGAGATGCGGACATaGATGTGGTTGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: GMLPVAIDSFLRSLYILAWEMRT*MWLVMR
Trigger: CCGCATCACCAACCACATCCATGTCCGCATCTCCCA...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAATGGGAGATGCGGACATaGATGTGGTTGGTGATGCGG +
Preference number: 4 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQWEMRT*MWLVMR
Trigger: CCGCATCACCAACCACATCCATGTCCGCATCTCCCA...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACATTGACCATGCTGAGCTaGGGCAGGACGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTLTMLS*GRTPVQ
Trigger: CTGCACTGGCGTCCTGCCCCAGCTCAGCATGGTCAA...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTATTGACCATGCTGAGCTaGGGCAGGACGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVLTMLS*GRTPVQ
Trigger: CTGCACTGGCGTCCTGCCCCAGCTCAGCATGGTCAA...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGTTCACCTCCTGGTTCTaGGACTGGCAGAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: LSFLATWLARMTVAKTGKFTSWF*DWQKGP
Trigger: GGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAA...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGAAAGGGGCCGGCCGACTaGCACTCAGGACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRKGPAD*HSGQEP
Trigger: AGGCTCCTGTCCTGAGTGCCAGTCGGCCGGCCCCTT...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCAGCCGCCACTTTGCCTaGACTCTCCTGGATTCGGAT +
Preference number: 4 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCSRHFA*TLLDSD
Trigger: ATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCT...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGCTCTATCTCGTCTCCTaGCTTGCAGCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: LSFLATWLARMTVAKTGKLYLVS*LAAVHQ
Trigger: CTGGTGGACAGCTGCAAGCCAGGAGACGAGATAGAG...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGCCTTGTTGTCCTTCTTaGCCACGTGGTTGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLPCCPS*PRGWLG
Trigger: TCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGG...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGCTTGTGCTTGCCACCTaGGTTTTTGGGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RHPAISPDPSTPSSSSALLVLAT*VFGLPS
Trigger: GGAGGGGAGCCCAAAAACCCAGGTGGCAAGCACAAG...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCATCTCGTCCTGGACTaGGTCCACGGTGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCHLVLD*VHGVPH
Trigger: GTGAGGGACACCGTGGACCCAGTCCAGGACGAGATG...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTATCCTTGTTGCTGGGGTaGTGTCTGACGTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVSLLLG*CLTWLP
Trigger: GGGCAGCCACGTCAGACACCACCCCAGCAACAAGGA...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CATTGTTGTCACGCCGGAATGAAAGGTAGCGGGCAAAAGTCTTGCGCATGCTGCTTGTCCTGGTCCATCTaGTTGAGCTTCGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: HCCHAGMKGSGQKSCACCLSWSI*LSFGWT
Trigger: GGTCCACCCGAAGCTCAACCAGATGGACCAGGACAA...GCAGCATGCGCAAGACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCTTGTCCTGGTCCATCTaGTTGAGCTTCGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPLSWSI*LSFGWT
Trigger: GGTCCACCCGAAGCTCAACCAGATGGACCAGGACAA...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGTTGGCCACCTTGTCCTaGTCCATCTGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLLATLS*SIWLSF
Trigger: GAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAA...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGAGATGGATGCGCGCGTaGGCCTCCGCCATGCGGATC +
Preference number: 4 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILRWMRA*ASAMRI
Trigger: GATCCGCATGGCGGAGGCCCACGCGCGCATCCATCT...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGTCAATAGTGTCCTGCTaGGCCCCAAAGCGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: RHPAISPDPSTPSSSSALSIVSC*APKRLR
Trigger: GCGCAACCGCTTTGGGGCCCAGCAGGACACTATTGA...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCACCTTGTCTCAATAGTGTCCTGCTaGGCCCCAAAGCGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: ACRHRFFPQVTVHLGHLVSIVSC*APKRLR
Trigger: GCGCAACCGCTTTGGGGCCCAGCAGGACACTATTGA...GACAAGGTGGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCTCAATAGTGTCCTGCTaGGCCCCAAAGCGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGSIVSC*APKRLR
Trigger: GCGCAACCGCTTTGGGGCCCAGCAGGACACTATTGA...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCCACCCACCTCTCCTATaGGAACCCCAGATCTTCGCA +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPHPPLL*EPQIFA
Trigger: TGCGAAGATCTGGGGTTCCCATAGGAGAGGTGGGTG...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491422.1
3UTR CAA 72 bp CAGAAAGGACCCAGGACGAAATTGCACTTGTTGCAGTaGTACTTGACCATGCTGAGCTGGGGCAGGACGCCA +
Preference number: 4 (lower is better)
Translates to: QKGPRTKLHLLQ*YLTMLSWGRTP
Trigger: TGGCGTCCTGCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp GACTGGCAGAAAGGACCCAGGACGAAATTGCACTTGTaGCAGTTGTACTTGACCATGCTGAGCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DWQKGPRTKLHL*QLYLTMLSWGR
Trigger: CCTGCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp TGGGACTGGCAGAAAGGACCCAGGACGAAATTGCACTaGTTGCAGTTGTACTTGACCATGCTGAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WDWQKGPRTKLH*LQLYLTMLSWG
Trigger: GCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCCTTTCTGCCAGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp CCTACAGCAACCTTGTTGTCCTTCTTGGCCACGTGGTaGGCTAGGATGACAGTGGCAAAGACAGGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PTATLLSFLATW*ARMTVAKTGKP
Trigger: TGGCTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGTTGCTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp TCGGTCAGTTCCCCTACAGCAACCTTGTTGTCCTTCTaGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SVSSPTATLLSF*ATWLARMTVAK
Trigger: CTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGAACTGACCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp GATTCTTTCCTCAGGTCACTGTACATCTTGGCCACCTaGTCCTGGTCCATCTGGTTGAGCTTCGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: DSFLRSLYILAT*SWSIWLSFGWT
Trigger: GGTCCACCCGAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAAGATGTACAGTGACCTGAGGAAAGAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGGCACAGAGTGGCCTTTaGGATCCTCCAGGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALAQSGL*DPPGSR
Trigger: TCGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGC...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGTGCGCAGGAAGTTCTTaGAGCGGTGGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: TRIPRNPYGWHRASELLQCAGSS*SGGGSP
Trigger: TGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCA...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTAGCCATTGGCAGTGTTaGGGGAGCCATCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASSHWQC*GSHHSC
Trigger: ACAACTATGATGGCTCCCTCAACACTGCCAATGGCT...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCGCGGATGGCCATGTTaGCGTCGTCTTCGATCACAT +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVRGWPC*RRLRSH
Trigger: ATGTGATCGAAGACGACGTCAACATGGCCATCCGCG...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGCGCGGATGGCCATGTTaGCGTCGTCTTCGATCACAT +
Preference number: 4 (lower is better)
Translates to: RHPAISPDPSTPSSSSALRGWPC*RRLRSH
Trigger: ATGTGATCGAAGACGACGTCAACATGGCCATCCGCG...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp ATACTTGAGAAACTGCGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTGTTGTCACGCCGGAATaGAAGGTAGCGGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: ILEKLRLRCARVSAQEHVVVTPE*KVAGKS
Trigger: ACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAAC...AACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAACATCCCACCCAAAGGTaGGAAGCACAAAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQHPTQR*EAQSRL
Trigger: AAGCCTGCTTTGTGCTTCTCACCTTTGGGTGGGATG...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCGCAGCAAAAGCAGCCTaGATACGCAACTCACGCCAA +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPAAKAA*IRNSRQ
Trigger: TTGGCGTGAGTTGCGTATTCAGGCTGCTTTTGCTGC...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGAGGCAGGTGGGAGATaGGGACATGGATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKEAGGR*GHGCGW
Trigger: CCAACCACATCCATGTCCGCATCTCCCACCTGCCTC...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTGAGGCAGGTGGGAGATaGGGACATGGATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCEAGGR*GHGCGW
Trigger: CCAACCACATCCATGTCCGCATCTCCCACCTGCCTC...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGTCACCACCCCACTGGTaGGGATCAGCTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALSPPHW*GSAGSD
Trigger: ATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGA...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCACCTTGTCTCTCGTCTCCTGGCTTaGAGCTGTCCACCAGATCTG +
Preference number: 4 (lower is better)
Translates to: ACRHRFFPQVTVHLGHLVSRLLA*SCPPDL
Trigger: CAGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGA...GACAAGGTGGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCACGTACCTTGTGCTTaGCACCTGGGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGHVPCA*HLGFWA
Trigger: AGCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR GCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCACACGTACCTTGTGCTTaGCACCTGGGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPHVPCA*HLGFWA
Trigger: AGCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTG...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCAACTGCGACTTCGCTGTaGCAGGGTCTCCGCACAAGA +
Preference number: 4 (lower is better)
Translates to: VPRVHQVLWFCVHKAQRATATSL*QGLRTR
Trigger: TCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGT...TGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAACTGCGACTTCGCTGTaGCAGGGTCTCCGCACAAGA +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVTATSL*QGLRTR
Trigger: TCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGT...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCCCATGGCCTCATGGATaGTGGTTCTGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGPWPHG*WFCPGH
Trigger: ATGACCAGGACAGAACCAGCATCCATGAGGCCATGG...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAATCATGGACTCGATGTaGCGCACCGTAATGGGGATG +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPIMDSM*RTVMGM
Trigger: CATCCCCATTACGGTGCGGCACATCGAGTCCATGAT...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTCTCACTGTCATAAAATaGAGAGAGGTTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: ASTTSRAASSKICSSSAGLTVIK*REVVDV
Trigger: AACATCCACAACCTCTCTGCATTTTATGACAGTGAG...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAAAAGTTCTTGAAGCGGTaGTGGATCTCCAGCCGGGGG +
Preference number: 4 (lower is better)
Translates to: GKSLAHAAHDAELLCVYEKFLKR*WISSRG
Trigger: CCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTT...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACCAGCACGTGCTCCCTaGCTGCCAAGTCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VPRVHQVLWFCVHKAQRAPARAP*LPSPHS
Trigger: ACTATGAGGACTTGGCAGCCAGGGAGCACGTGCTGG...TGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGATGCGGACATGGATGTaGTTGGTGATGCGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: LSFLATWLARMTVAKTGKMRTWM*LVMRSY
Trigger: GTACGACCGCATCACCAACCACATCCATGTCCGCAT...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATGCGGACATGGATGTaGTTGGTGATGCGGTCGTAC +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGMRTWM*LVMRSY
Trigger: GTACGACCGCATCACCAACCACATCCATGTCCGCAT...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAATGGTCACCACCCCACTaGTGCGGATCAGCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKWSPPH*CGSAGS
Trigger: TGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCA...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp ATGTCAAAGCGTGAGATGATGGGCTCTGTGAGGTCCACGTTCTCAGAGAAAGTCTCCTGGTTCTGGGACTaGCAGAAAGGACCCAGGACG +
Preference number: 4 (lower is better)
Translates to: MSKREMMGSVRSTFSEKVSWFWD*QKGPRT
Trigger: CGTCCTGGGTCCTTTCTGCCAGTCCCAGAACCAGGA...GACTTTCTCTGAGAACGTGGACCTCACAGAGCCCATCATCTCACGCTTTGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp CTGAAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGCAGCAAAAGAAGGGGCCGGCCGACTaGCACTCAGGACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: LKTITNIFNQLSGQRQQKKGPAD*HSGQEP
Trigger: AGGCTCCTGTCCTGAGTGCCAGTCGGCCGGCCCCTT...CTTTTGCTGCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp CACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTCATGACCATAGATaGAAGGAGCAATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: HQRQVGDADMDVVGDAVVLHDHR*KEQCWQ
Trigger: TTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAG...TACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAACTTGTGCTTGCCACCTaGGTTTTTGGGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GKSLAHAAHDAELLCVYELVLAT*VFGLPS
Trigger: GGAGGGGAGCCCAAAAACCCAGGTGGCAAGCACAAG...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTGCTTGCCACCTaGGTTTTTGGGCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HRASELLQDHFPFQVVAELVLAT*VFGLPS
Trigger: GGAGGGGAGCCCAAAAACCCAGGTGGCAAGCACAAG...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGTTGTCCTGGTCCATCTaGTTGAGCTTCGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: TRIPRNPYGWHRASELLQLSWSI*LSFGWT
Trigger: GGTCCACCCGAAGCTCAACCAGATGGACCAGGACAA...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGTTGGCCACCTTGTCCTaGTCCATCTGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGLATLS*SIWLSF
Trigger: GAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAA...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CCA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATGGTCACTGTACATCTTaGCCACCTTGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHGHCTS*PPCPGP
Trigger: TGGACCAGGACAAGGTGGCCAAGATGTACAGTGACC...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCTTCCTTTTCAGGTCGTaGCTGAACTTGTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: SLQGGDDASLRDGDALLLFLFRS*LNLFIL
Trigger: CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAA...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATAAGGAATCCTTATGGATaGCATAGGGCCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIRNPYG*HRASEL
Trigger: CAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCT...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCGCACAGAGTGGCCTTTaGGATCCTCCAGGTTCTCGA +
Preference number: 4 (lower is better)
Translates to: HSCCDRCQSALSRLLACSAQSGL*DPPGSR
Trigger: TCGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGC...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCATGCGCAGGAAGTTCTTaGAGCGGTGGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: VPRVHQVLWFCVHKAQRACAGSS*SGGGSP
Trigger: TGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCA...TGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACATGCGCAGGAAGTTCTTaGAGCGGTGGTGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTCAGSS*SGGGSP
Trigger: TGGAGATCCACCACCGCTTCAAGAACTTCCTGCGCA...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACATGGATGTGGTTGGTaGTGCGGTCGTACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: HRASELLQDHFPFQVVAEHGCGW*CGRTWG
Trigger: ACCCCAAGTACGACCGCATCACCAACCACATCCATG...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAGCCATTGGCAGTGTTaGGGGAGCCATCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPSHWQC*GSHHSC
Trigger: ACAACTATGATGGCTCCCTCAACACTGCCAATGGCT...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCGAGCCAGGCCTCTCTTaGTGTCTTCATGACCATAGA +
Preference number: 4 (lower is better)
Translates to: GMLPVAIDSFLRSLYILAEPGLS*CLHDHR
Trigger: TCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTC...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCGAGCCAGGCCTCTCTTaGTGTCTTCATGACCATAGA +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGEPGLS*CLHDHR
Trigger: TCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTC...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGGATGTCAAAGCGTaGGATGATGGGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVQDVKA*DDGLCE
Trigger: CTCACAGAGCCCATCATCTCACGCTTTGACATCCTG...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GAGACTGAAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGCAGCACCTGGTCCATCTGGTTaGGCTTCGGGTGGACCCTCT +
Preference number: 4 (lower is better)
Translates to: ETENDYKHLQPALWPKAAPGPSG*ASGGPS
Trigger: AGAGGGTCCACCCGAAGCTCAACCAGATGGACCAGG...TGCTGCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCCGCGGATGGCCATGTTaGCGTCGTCTTCGATCACAT +
Preference number: 4 (lower is better)
Translates to: HSCCDRCQSALSRLLACSRGWPC*RRLRSH
Trigger: ATGTGATCGAAGACGACGTCAACATGGCCATCCGCG...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTGTCACGCCGGAATaGAAGGTAGCGGGCAAAAGT +
Preference number: 4 (lower is better)
Translates to: RHPAISPDPSTPSSSSALVVTPE*KVAGKS
Trigger: ACTTTTGCCCGCTACCTTTCATTCCGGCGTGACAAC...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp ATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCCTAACTGCTTCAGTATaGAGAGCAACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: IIRMTHIPPLRLRSPERCLTASV*RATAHC
Trigger: ACAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAG...GCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR TCA 90 bp CTGGTAGTTCTGATAGATGGTCTCCTCCATGTTGACCTCAAAGGGGCCGGCCGATTGTGGATGTTGATCTaGCGAGCCTTATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LVVLIDGLLHVDLKGAGRLWMLI*RALSTK
Trigger: CTTGGTGGATAAGGCTCGTCAGATCAACATCCACAA...TCGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCATCTATCAGAACTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CTGGTAGTTCTGATAGATGGTCTCCTCCATGTTGACCTCAAAGGGGCCGGCCGAAGAGGTTGTGGATGTTaGTCTGACGAGCCTTATCCA +
Preference number: 4 (lower is better)
Translates to: LVVLIDGLLHVDLKGAGRRGCGC*SDEPYP
Trigger: TGGATAAGGCTCGTCAGATCAACATCCACAACCTCT...TCGGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCATCTATCAGAACTACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCATCTGATCCAAGGTACTaGGTGGAGACAAAGCACTCG +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPSDPRY*VETKHS
Trigger: CGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGA...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAGTGTGTTGGCTGAACTaGAGCTCCTGGCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTVCWLN*SSWLPD
Trigger: GTCAGGAAGCCAGGAGCTTCAGTTCAGCCAACACAC...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR GCA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGCCTCCAGGTTCTCGATaGTCTCGATCATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKPPGSR*SRSSPR
Trigger: ACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGG...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACGTGCTCCCTGGCTaGCAAGTCCTCATAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRHVLPG*QVLIVH
Trigger: GTGAACTATGAGGACTTGGCAGCCAGGGAGCACGTG...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAATCACCACCCCACTGGTaGGGATCAGCTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKSPPHW*GSAGSD
Trigger: ATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGA...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGGGCCAGCCGCCACTTTaGCTGGACTCTCCTGGATTC +
Preference number: 4 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILGQPPL*LDSPGF
Trigger: GAATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCC...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAGCTGTCCACCAGATCTaGGAGGAGAATGGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVAVHQI*EENGVL
Trigger: AAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGC...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGAGATGGAAGGAGCAATaGTGGCAAAGATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DADMDVVGDAVVLGVHGQRWKEQ*WQRSSL
Trigger: GAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCT...CTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATTCACCACGTACCTTGTaGTTGCCACCTGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHSPRTL*LPPGFL
Trigger: CAAAAACCCAGGTGGCAAGCACAAGGTACGTGGTGA...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGCCATGGCCTCATGGATaGTGGTTCTGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: TRIPRNPYGWHRASELLQPWPHG*WFCPGH
Trigger: ATGACCAGGACAGAACCAGCATCCATGAGGCCATGG...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAATGGAGATGCTCTGTTaGTCCATGGCCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPMEMLC*SMASWM
Trigger: CATCCATGAGGCCATGGAGCAACAGAGCATCTCCAT...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGATGGAGATGCTCTGTTaGTCCATGGCCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: LSFLATWLARMTVAKTGKMEMLC*SMASWM
Trigger: CATCCATGAGGCCATGGAGCAACAGAGCATCTCCAT...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp AAAGCACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATCATGGACTCGATGTaGCGCACCGTAATGGGGATG +
Preference number: 4 (lower is better)
Translates to: KAQRALTTPNQNPKESLWIMDSM*RTVMGM
Trigger: CATCCCCATTACGGTGCGGCACATCGAGTCCATGAT...CCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGCGTGGGCCTCCGCCATaGGGATCATGGACTCGATGT +
Preference number: 4 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILRGPPP*GSWTRC
Trigger: ACATCGAGTCCATGATCCGCATGGCGGAGGCCCACG...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCACTCATCCTCAAATGGTaGAAGGTCACGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPLILKW*KVTARA
Trigger: AGCCCTGGCCGTGACCTTCCACCATTTGAGGATGAG...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAGGACTCATCCTCAAATaGTGGAAGGTCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTGLILK*WKVTAR
Trigger: CCTGGCCGTGACCTTCCACCATTTGAGGATGAGTCC...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGACTGCCTCCCTCTGACTaGCCGTCAGCTCCTCTACGT +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRLPPSD*PSAPLR
Trigger: ACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAG...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCACAAATAAGAGAGTGGGGAAACAGACAGGGAGCAATGGCAGCTGATAACTGTCACTCGCGCACAGAGTaGCCTTTGAGATCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AQIREWGNRQGAMAADNCHSRTE*PLRSSR
Trigger: CCTGGAGGATCTCAAAGGCCACTCTGTGCGCGAGTG...ACAGTTATCAGCTGCCATTGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp TATGTCACCTGCTCTGCCACTAACTGCTTCAGTATGAAGAGCAACAGCTCATTGTTGACCATGCTGAGCTaGGGCAGGACGCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: YVTCSATNCFSMKSNSSLLTMLS*GRTPVQ
Trigger: CTGCACTGGCGTCCTGCCCCAGCTCAGCATGGTCAA...CAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCAGGTGACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAATTCACCTCCTGGTTCTaGGACTGGCAGAAAGGACCC +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKFTSWF*DWQKGP
Trigger: GGGTCCTTTCTGCCAGTCCCAGAACCAGGAGGTGAA...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCAGCCGCCACTTTGCCTaGACTCTCCTGGATTCGGAT +
Preference number: 4 (lower is better)
Translates to: HSCCDRCQSALSRLLACSSRHFA*TLLDSD
Trigger: ATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCT...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTAGCCGCCACTTTGCCTaGACTCTCCTGGATTCGGAT +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCSRHFA*TLLDSD
Trigger: ATCCGAATCCAGGAGAGTCCAGGCAAAGTGGCGGCT...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTACTCTATCTCGTCTCCTaGCTTGCAGCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVLYLVS*LAAVHQ
Trigger: CTGGTGGACAGCTGCAAGCCAGGAGACGAGATAGAG...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AAAGCACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGTCCTTCTTGGCCACGTaGTTGGCTAGGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: KAQRALTTPNQNPKESLWSFLAT*LARMTV
Trigger: CACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGA...CCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCTCCTTCTTGGCCACGTaGTTGGCTAGGATGACAGTG +
Preference number: 4 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGSFLAT*LARMTV
Trigger: CACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGA...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCCTTGTTGTCCTTCTTaGCCACGTGGTTGGCTAGGA +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVPCCPS*PRGWLG
Trigger: TCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGG...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCCAAAGCACTCGGAGGTaGCAAGATGTTCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGQSTRR*QDVQQP
Trigger: TGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTG...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCCTCCTCATCGCTGTCTaGGGAGGCAAGAGACACCAT +
Preference number: 4 (lower is better)
Translates to: HSCCDRCQSALSRLLACSLLIAV*GGKRHH
Trigger: ATGGTGTCTCTTGCCTCCCCAGACAGCGATGAGGAG...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp AAAGCACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGAGAGCTGGGAAGGAATaGCACCAATACCAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: KAQRALTTPNQNPKESLWRAGKE*HQYQPL
Trigger: CAGAGGCTGGTATTGGTGCCATTCCTTCCCAGCTCT...CCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR TCA 90 bp ACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGCATGGATGTGGTTGGTaGTGCGGTCGTACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: TLVPRVHQVLWFCVHKAQHGCGW*CGRTWG
Trigger: ACCCCAAGTACGACCGCATCACCAACCACATCCATG...CTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCCGCACAAGAGCACGTTaGTATCACCACGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGRTRAR*YHHVPC
Trigger: ACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCG...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGCGCACAAGAGCACGTTaGTATCACCACGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALRTRAR*YHHVPC
Trigger: ACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCG...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCCTTTCTCAATATACTTaGGAAACTGCGACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARLSQYT*ETATSL
Trigger: CAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAG...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCTCTCCTTGGCGTAGATaGTGTACTTCTTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPSPWRR*CTSSGP
Trigger: AGGTCCTGAAGAAGTACATCATCTACGCCAAGGAGA...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCTTGTGGATGTTGATCTaGCGAGCCTTATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPLWMLI*RALSTK
Trigger: CTTGGTGGATAAGGCTCGTCAGATCAACATCCACAA...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAGAGGTTGTGGATGTTaGTCTGACGAGCCTTATCCA +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPRGCGC*SDEPYP
Trigger: TGGATAAGGCTCGTCAGATCAACATCCACAACCTCT...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTACATCCCACCCAAAGGTaGGAAGCACAAAGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVHPTQR*EAQSRL
Trigger: AAGCCTGCTTTGTGCTTCTCACCTTTGGGTGGGATG...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGAGAGGCAGGTGGGAGATaGGGACATGGATGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLREAGGR*GHGCGW
Trigger: CCAACCACATCCATGTCCGCATCTCCCACCTGCCTC...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGGCTGTCCACCAGATCTaGGAGGAGAATGGCGTCCTT +
Preference number: 4 (lower is better)
Translates to: TLVPRVHQVLWFCVHKAQAVHQI*EENGVL
Trigger: AAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGC...CTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACGTACCTTGTGCTTaGCACCTGGGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTHVPCA*HLGFWA
Trigger: AGCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTG...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACACGTACCTTGTGCTTaGCACCTGGGTTTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HRASELLQDHFPFQVVAEHVPCA*HLGFWA
Trigger: AGCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTG...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGTCACCACGTACCTTGTaGTTGCCACCTGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALSPRTL*LPPGFL
Trigger: CAAAAACCCAGGTGGCAAGCACAAGGTACGTGGTGA...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAACCATGGCCTCATGGATaGTGGTTCTGTCCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: GKSLAHAAHDAELLCVYEPWPHG*WFCPGH
Trigger: ATGACCAGGACAGAACCAGCATCCATGAGGCCATGG...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTATGGAGATGCTCTGTTaGTCCATGGCCTCATGGATG +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVMEMLC*SMASWM
Trigger: CATCCATGAGGCCATGGAGCAACAGAGCATCTCCAT...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCATCATGGACTCGATGTaGCGCACCGTAATGGGGATG +
Preference number: 4 (lower is better)
Translates to: HSCCDRCQSALSRLLACSIMDSM*RTVMGM
Trigger: CATCCCCATTACGGTGCGGCACATCGAGTCCATGAT...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGACCTCAATAGTGTCCTaGTGGGCCCCAAAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: TLVPRVHQVLWFCVHKAQTSIVS*WAPKRL
Trigger: CAACCGCTTTGGGGCCCAGCAGGACACTATTGAGGT...CTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp AAAGCACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGACCAATACCAGCCTCTaGCAGGGATGCATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KAQRALTTPNQNPKESLWTNTSL*QGCISG
Trigger: TCCAGAAATGCATCCCTGGCAGAGGCTGGTATTGGT...CCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR CCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGACTGGTGCGGATCAGCTaGTTCAGATGCAGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRLVRIS*FRCSCL
Trigger: GAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAG...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACCTGGTTTCACCTCCTaGTTCTGGGACTGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTPGFTS*FWDWQK
Trigger: TTTCTGCCAGTCCCAGAACCAGGAGGTGAAACCAGG...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATTGGAAGGAGCAATGCTaGCAAAGATCTTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHWKEQC*QRSSLR
Trigger: TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCA...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAATTGGCCACCTTGTCCTaGTCCATCTGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ALTLVPRVHQVLWFCVHKLATLS*SIWLSF
Trigger: GAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAA...TTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGAGGTCACTGTACATCTTaGCCACCTTGTCCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRGHCTS*PPCPGP
Trigger: TGGACCAGGACAAGGTGGCCAAGATGTACAGTGACC...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGATCAATAGTGTCCTGCTaGGCCCCAAAGCGGTTGCGC +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRSIVSC*APKRLR
Trigger: GCGCAACCGCTTTGGGGCCCAGCAGGACACTATTGA...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GATAACTGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGTTCCTTTTCAGGTCGTaGCTGAACTTGTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: DNCGEWIIRMTHIPPLRLFLFRS*LNLFIL
Trigger: CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAA...CAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACAGTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAAGGAATCCTTATGGATaGCATAGGGCCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQRNPYG*HRASEL
Trigger: CAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCT...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCATCCAAGGTACTGAGTaGAGACAAAGCACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGIQGTE*RQSTRR
Trigger: CCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGAT...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCGATAACTGTGGCGAGTaGATAATCCGCATGACTCAC +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPDNCGE*IIRMTH
Trigger: GTGAGTCATGCGGATTATCCACTCGCCACAGTTATC...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp CCGAATGCACAAATAAGAGAGTGGGGAAACAGACAGGGAGCAATGGCAGCTGATACAGACAGGGAGCAATaGCAGCTGATAACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: PNAQIREWGNRQGAMAADTDREQ*QLITVA
Trigger: CGCCACAGTTATCAGCTGCCATTGCTCCCTGTCTGT...ATCAGCTGCCATTGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGCATTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCGCACAAATAAGAGAGTaGGGAAACAGACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPAQIRE*GNRQGA
Trigger: TGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGC...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
3UTR CAA 72 bp TTCACATCTTCATCGGTCAGTTCCCCTACAGCAACCTaGTTGTCCTTCTTGGCCACGTGGTTGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: FTSSSVSSPTAT*LSFLATWLARM
Trigger: CATCCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGAACTGACCGATGAAGATGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
3UTR CAA 72 bp GTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTaGGCCACCTTGTCCTGGTCCATCTGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VAIDSFLRSLYI*ATLSWSIWLSF
Trigger: GAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGAAGCCATTGGCAGTGTTaGGGGAGCCATCATAGTTGT +
Preference number: 4 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRSHWQC*GSHHSC
Trigger: ACAACTATGATGGCTCCCTCAACACTGCCAATGGCT...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGAGCCAGGCCTCTCTTaGTGTCTTCATGACCATAGA +
Preference number: 4 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKEPGLS*CLHDHR
Trigger: TCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTC...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGATCACCACCCCACTGGTaGGGATCAGCTGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRSPPHW*GSAGSD
Trigger: ATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGA...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp CAAGAGGGCAGCAGCTCTCCTGACATCCATGTAAGAAGGCTAACACCTAAACCATCACCACGTACCTTGTaGTTGCCACCTGGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: QEGSSSPDIHVRRLTPKPSPRTL*LPPGFL
Trigger: CAAAAACCCAGGTGGCAAGCACAAGGTACGTGGTGA...TGGTTTAGGTGTTAGCCTTCTTACATGGATGTCAGGAGAGCTGCTGCCCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGTGCTCTGCCACTAACTaGTTCAGTATGAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGCSATN*FSMKSN
Trigger: GTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCA...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR GCA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATTGCTCTGCCACTAACTaGTTCAGTATGAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHCSATN*FSMKSN
Trigger: GTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCA...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACTCACTGTCATAAAATaGAGAGAGGTTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: EWIIRMTHIPPLRLRSPELTVIK*REVVDV
Trigger: AACATCCACAACCTCTCTGCATTTTATGACAGTGAG...TTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCCGAGTTCATCAAGTaGTCTGGTTTTGTGTCCATA +
Preference number: 4 (lower is better)
Translates to: GTDHPKPESQGILMDGIGPEFIK*SGFVSI
Trigger: TATGGACACAAAACCAGAGCACTTGATGAACTCGGG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTAGGGGCACAGAAACCTaGAGGAGACTGAAAACGATT +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVRGTET*RRLKTI
Trigger: AATCGTTTTCAGTCTCCTGCAGGTTTCTGTGCCCCT...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAAGCCTCTGCCAGGGATaGATTTCTGGAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTSLCQG*ISGAFL
Trigger: AAGGAAAGCTCCAGAAATGCATCCCTGGCAGAGGCT...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR CCA 90 bp GAGACTGAAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGCAGCACTCATCCTCAAATGGTaGAAGGTCACGGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ETENDYKHLQPALWPKAALILKW*KVTARA
Trigger: AGCCCTGGCCGTGACCTTCCACCATTTGAGGATGAG...TGCTGCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTTGGAAGGAGCAATGCTaGCAAAGATCTTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVWKEQC*QRSSLR
Trigger: TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCA...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCCTTCATGACCATAGATaGAAGGAGCAATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPLHDHR*KEQCWQ
Trigger: TTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAG...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATAATGCTGGTTCTGTCCTaGTCATTCATCTTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIMLVLS*SFILSN
Trigger: ATTTGACAAGATGAATGACCAGGACAGAACCAGCAT...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAATGGCCTCATGGATGCTaGTTCTGTCCTGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: HRASELLQDHFPFQVVAEWPHGC*FCPGHS
Trigger: TGAATGACCAGGACAGAACCAGCATCCATGAGGCCA...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTTGGCCTCATGGATGCTaGTTCTGTCCTGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCWPHGC*FCPGHS
Trigger: TGAATGACCAGGACAGAACCAGCATCCATGAGGCCA...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCTTCCTTTTCAGGTCGTaGCTGAACTTGTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGFLFRS*LNLFIL
Trigger: CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAA...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGAGGAATCCTTATGGATaGCATAGGGCCTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKRNPYG*HRASEL
Trigger: CAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCT...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCAAGTAAGACACACTaGCAAGGCATCCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCPSKTH*QGIPPK
Trigger: TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGG...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAAAGCACTCGGAGGTaGCAAGATGTTCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRQSTRR*QDVQQP
Trigger: TGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTG...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAATCCAAGGTACTGAGTaGAGACAAAGCACTCGGAGG +
Preference number: 4 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKIQGTE*RQSTRR
Trigger: CCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGAT...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTTCAACCAGCTCTCTaGCCAAAGGCAGCAAAAGCA +
Preference number: 4 (lower is better)
Translates to: VPRVHQVLWFCVHKAQRALQPAL*PKAAKA
Trigger: TGCTTTTGCTGCCTTTGGCCAGAGAGCTGGTTGAAG...TGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTATCGATGGCCAAGAGCTaGGAAGGAATGGCACCAATA +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVSMAKS*EGMAPI
Trigger: TATTGGTGCCATTCCTTCCCAGCTCTTGGCCATCGA...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR TCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCCTTTCTCAATATACTTaGGAAACTGCGACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGLSQYT*ETATSL
Trigger: CAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAG...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCCTAACTGCTTCAGTATaGAGAGCAACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPLTASV*RATAHC
Trigger: ACAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAG...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACATTGTGGATGTTGATCTaGCGAGCCTTATCCACCAAG +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTLWMLI*RALSTK
Trigger: CTTGGTGGATAAGGCTCGTCAGATCAACATCCACAA...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCAATATACTTGAGAAACTaGGACTTCGCTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPRVHQVLWFCVHKAQRAIYLRN*DFAVPG
Trigger: CCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTATAT...TGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCAATATACTTGAGAAACTaGGACTTCGCTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPIYLRN*DFAVPG
Trigger: CCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTATAT...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAATATACTTGAGAAACTaGGACTTCGCTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTIYLRN*DFAVPG
Trigger: CCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTATAT...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCCCCGAGTTCATCAAGTaGTCTGGTTTTGTGTCCATA +
Preference number: 4 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGPEFIK*SGFVSI
Trigger: TATGGACACAAAACCAGAGCACTTGATGAACTCGGG...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAGAAACCAAACCGAATaGACAAATAAGAGAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPRNQTE*TNKRVG
Trigger: CCCCACTCTCTTATTTGTGCATTCGGTTTGGTTTCT...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CCA 90 bp TCTCCGCACAAGAGCACGTTGATATCACCACGTACCTTGTGCTTGCCACCTGGGATGCTGGTTCTGTCCTaGTCATTCATCTTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: SPHKSTLISPRTLCLPPGMLVLS*SFILSN
Trigger: ATTTGACAAGATGAATGACCAGGACAGAACCAGCAT...CCCAGGTGGCAAGCACAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGATTGGCCACCTTGTCCTaGTCCATCTGGTTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRLATLS*SIWLSF
Trigger: GAAGCTCAACCAGATGGACCAGGACAAGGTGGCCAA...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp ACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGCCAGGGATGCATTTCTaGAGCTTTCCTTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: TLVPRVHQVLWFCVHKAQPGMHF*SFPSLR
Trigger: TCGGAGAGAAGGAAAGCTCCAGAAATGCATCCCTGG...CTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR TCA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGCTTTCTCAATATACTTaGGAAACTGCGACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKLSQYT*ETATSL
Trigger: CAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAG...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAAGATGGAAGGAGCAATaGTGGCAAAGATCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKRWKEQ*WQRSSL
Trigger: GAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCT...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTTGCTCTGCCACTAACTaGTTCAGTATGAAGAGCAAC +
Preference number: 4 (lower is better)
Translates to: AISPDPSTPSSSSALVLCCSATN*FSMKSN
Trigger: GTTGCTCTTCATACTGAAGCAGTTAGTGGCAGAGCA...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAACTCACTGTCATAAAATaGAGAGAGGTTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQLTVIK*REVVDV
Trigger: AACATCCACAACCTCTCTGCATTTTATGACAGTGAG...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAACTTCATGACCATAGATaGAAGGAGCAATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKLHDHR*KEQCWQ
Trigger: TTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAG...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTTGGCCTCATGGATGCTaGTTCTGTCCTGGTCATTCA +
Preference number: 4 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLWPHGC*FCPGHS
Trigger: TGAATGACCAGGACAGAACCAGCATCCATGAGGCCA...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCGTTCATCAAGTGCTCTaGTTTTGTGTCCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: TEGTDHPKPESQGILMDGVHQVL*FCVHKA
Trigger: TGCTTTATGGACACAAAACCAGAGCACTTGATGAAC...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACATGGAAGGAGCAATGCTaGCAAAGATCATTGTATCCC +
Preference number: 4 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTWKEQC*QRSLYP
Trigger: GGGATACAATGATCTTTGCCAGCATTGCTCCTTCCA...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR TCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCACTTTCTCAATATACTTaGGAAACTGCGACTTCGCTG +
Preference number: 4 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPLSQYT*ETATSL
Trigger: CAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAG...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTTCTCCTTGGCGTAGATaGTGTACTTCTTCAGGACCT +
Preference number: 4 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLSPWRR*CTSSGP
Trigger: AGGTCCTGAAGAAGTACATCATCTACGCCAAGGAGA...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTAACTGCTTCAGTATaGAGAGCAACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: HRASELLQDHFPFQVVAELTASV*RATAHC
Trigger: ACAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAG...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR TCA 90 bp CTGAAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGCAGCAAAAGTCTGATCCAAGGTACTaGGTGGAGACAAAGCACTCG +
Preference number: 4 (lower is better)
Translates to: LKTITNIFNQLSGQRQQKSDPRY*VETKHS
Trigger: CGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGA...CTTTTGCTGCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR GCA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCAAGTTGTTGTGATAGATaGCAGTCAGCTCTATCTCGT +
Preference number: 4 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPSCCDR*QSALSR
Trigger: ACGAGATAGAGCTGACTGGCATCTATCACAACAACT...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGTTGTTGTGATAGATaGCAGTCAGCTCTATCTCGT +
Preference number: 4 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVSCCDR*QSALSR
Trigger: ACGAGATAGAGCTGACTGGCATCTATCACAACAACT...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTTGGAAGGAGCAATGCTaGCAAAGATCTTCTCTCCGA +
Preference number: 4 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLWKEQC*QRSSLR
Trigger: TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCA...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp ACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGTTGTTGTGATAGATaGCAGTCAGCTCTATCTCGT +
Preference number: 4 (lower is better)
Translates to: TLVPRVHQVLWFCVHKAQSCCDR*QSALSR
Trigger: ACGAGATAGAGCTGACTGGCATCTATCACAACAACT...CTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR GCA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGAAGATGGAAGGAGCAATaGTGGCAAAGATCATTGTAT +
Preference number: 4 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRRWKEQ*WQRSLY
Trigger: ATACAATGATCTTTGCCAGCATTGCTCCTTCCATCT...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR CCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGACTTCATGACCATAGATaGAAGGAGCAATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRLHDHR*KEQCWQ
Trigger: TTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAG...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CCA 90 bp GTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCAATGCTGGTTCTGTCCTaGTCATTCATCTTGTCAAAT +
Preference number: 4 (lower is better)
Translates to: VPRVHQVLWFCVHKAQRAMLVLS*SFILSN
Trigger: ATTTGACAAGATGAATGACCAGGACAGAACCAGCAT...TGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CCA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGAGTTCATCAAGTGCTCTaGTTTTGTGTCCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRVHQVL*FCVHKA
Trigger: TGCTTTATGGACACAAAACCAGAGCACTTGATGAAC...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR TCA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCTAACTGCTTCAGTATaGAGAGCAACAGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLLTASV*RATAHC
Trigger: ACAATGAGCTGTTGCTCTTCATACTGAAGCAGTTAG...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR GCA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGACTCACTGTCATAAAATaGAGAGAGGTTGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRLTVIK*REVVDV
Trigger: AACATCCACAACCTCTCTGCATTTTATGACAGTGAG...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS GCA 90 bp CGTCCTCCTCGCCGTCCTCCGTGGCCCGCTCCACCTGGCGGCGCTTaGGGGCAGGGCGCTCCTCGTCCTCCTCATCGCTGTCTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RPPRRPPWPAPPGGA*GQGAPRPPHRCLGR
Trigger: CCTCCCCAGACAGCGATGAGGAGGACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGAGCGGGCCACGGAGGACGGCGAGGAGGACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS GCA 90 bp CAGGCCCCGGCCAGCCTCCCGGTCACGCTGCCGCATGGCCCGCTCTaGTGCCTCCCTCTGACTGGCCGTCAGCTCCTCTACGTCCTCATC +
Preference number: 5 (lower is better)
Translates to: QAPASLPVTLPHGPL*CLPLTGRQLLYVLI
Trigger: GATGAGGACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACCGGGAGGCTGGCCGGGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000480910.1
CDS GCA 90 bp CGTCCTCCTCGCCGTCCTCCGTGGCCCGCTCCACCTGGCGGCGCTTaGGGGCAGGGCGCTCCTCGTCCTCCTCATCGCTGTCATACAGGA +
Preference number: 5 (lower is better)
Translates to: RPPRRPPWPAPPGGA*GQGAPRPPHRCHTG
Trigger: TCCTGTATGACAGCGATGAGGAGGACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGAGCGGGCCACGGAGGACGGCGAGGAGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000468659.1
CDS CCA 90 bp ATCATCTCCTCGTCCTCCTCGCCGTCCTCCGTGGCCCGCTCCACCTaGCGGCGCTTGCGGGCAGGGCGCTCCTCGTCCTCCTCATCGCTG +
Preference number: 5 (lower is better)
Translates to: IISSSSSPSSVARST*RRLRAGRSSSSSSL
Trigger: CAGCGATGAGGAGGACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGAGCGGGCCACGGAGGACGGCGAGGAGGACGAGGAGATGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CAA 90 bp GAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACATCCACCTGGCGGCGCTaGCGGGCAGGGCGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: EPRTLRWHCRALFHHRGTSTWRR*RAGRSS
Trigger: CGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGA...TGTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS GCA 90 bp GCCCCGGCCAGCCTCCCGGTCACGCTGCCGCATGGCCCGCTCTGCTaGCTCCCTCTGACTGGCCGTCAGCTCCTCTACGTCCTCATCATC +
Preference number: 5 (lower is better)
Translates to: APASLPVTLPHGPLC*LPLTGRQLLYVLII
Trigger: GATGATGAGGACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACCGGGAGGCTGGCCGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000480910.1
CDS-3UTR CAA 90 bp CTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGAGGAGAATGGCGTCCTaGGAGCGGGGCAGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: LRSPERCAGTVVPSSTTGRRMAS*ERGSRP
Trigger: TGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCT...CCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS TCA 90 bp GCCTCCCGGTCACGCTGCCGCATGGCCCGCTCTGCTGCCTCCCTCTaGCTGGCCGTCAGCTCCTCTACGTCCTCATCATCCAGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: ASRSRCRMARSAASL*LAVSSSTSSSSRAS
Trigger: ACTGGCTCTGGATGATGAGGACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACCGGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000480910.1
CDS CCA 90 bp CCCGGTCACGCTGCCGCATGGCCCGCTCTGCTGCCTCCCTCTGACTaGCCGTCAGCTCCTCTACGTCCTCATCATCCAGAGCCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: PGHAAAWPALLPPSD*PSAPLRPHHPEPVP
Trigger: AGGGACTGGCTCTGGATGATGAGGACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000480910.1
CDS-3UTR CAA 90 bp GAAGTTCTTGAAGCGGTGGTGGATCTCCAGCCGGGGGCCCGCCATGCTCACCCATCAGCAGCGCTGCCATaGGCCAGCCCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: EVLEAVVDLQPGARHAHPSAALP*ASPSSS
Trigger: GGAGGAGGAGGGGCTGGCCAATGGCAGCGCTGCTGA...TGGGTGAGCATGGCGGGCCCCCGGCTGGAGATCCACCACCGCTTCAAGAACTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCTCGCTGATGCGCTCCTaGAAGACGTTGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: HPTPATEEPRTLRWHCRASLMRS*KTLWPW
Trigger: CCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGA...GGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCGTGCGCAGGAAGTTCTaGAAGCGGTGGTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVVRRKF*KRWWIS
Trigger: GGAGATCCACCACCGCTTCAAGAACTTCCTGCGCAC...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATTCCACGCCATACGTGTaGGGCATGGCGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDSTPYV*GMAGSA
Trigger: TGCTGAGCCCGCCATGCCCAACACGTATGGCGTGGA...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGGTGCCGCTGGACATACGCCGTGAGGCCCACAGCCGACGCCCCCTGGCCAGTGAGCAACAGCTCATTGTaGTCACGCCGGAATGAAAGG +
Preference number: 5 (lower is better)
Translates to: GCRWTYAVRPTADAPWPVSNSSL*SRRNER
Trigger: CCTTTCATTCCGGCGTGACAACAATGAGCTGTTGCT...CACTGGCCAGGGGGCGTCGGCTGTGGGCCTCACGGCGTATGTCCAGCGGCACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACAGTGCGCAGGAAGTTCTaGAAGCGGTGGTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: EPRTLRWHCRALFHHRGTVRRKF*KRWWIS
Trigger: GGAGATCCACCACCGCTTCAAGAACTTCCTGCGCAC...TGTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCATGGTCTCCTCCATGTaGACCTCAAAGGGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: GLQLSTRSARRMASLERGMVSSM*TSKGPA
Trigger: GGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCAT...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCTCAGCAGCGCTGCCATaGGCCAGCCCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CGEWIIRMTHIPPLRLRSSAALP*ASPSSS
Trigger: GGAGGAGGAGGGGCTGGCCAATGGCAGCGCTGCTGA...GCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCTCTCGTCCTATGGGGTaGGCGGCAGCAATGACCGTG +
Preference number: 5 (lower is better)
Translates to: GLQLSTRSARRMASLERGSRPMG*AAAMTV
Trigger: CACGGTCATTGCTGCCGCCAACCCCATAGGACGAGA...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477668.5
CDS-3UTR CAA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCAGGAGAATGGCGTCCTaGGAGCGGGGCAGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARRRMAS*ERGSRP
Trigger: TGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCT...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACTGGGTCATCTCGTCTCCTGGCTaGCAGCTGTCCACCAGATCT +
Preference number: 5 (lower is better)
Translates to: SDVAAHHEAGQHLVLDWVISSPG*QLSTRS
Trigger: AGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGAT...GACCCAGTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CAA 90 bp GTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCTGGACTCCCCTACAGCAACCTaGTTGTCCTTCTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: VVSDVAAHHEAGQHLVLDSPTAT*LSFLAT
Trigger: CGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGA...GTCCAGGACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CAA 90 bp GCTGGGGTGGTGTCTGACGTGGCTGCCCACCACGAAGCGGGCCAGCATCTCGTCCCGCACAAGAGCACGTaGATATCACCACGTACCTTG +
Preference number: 5 (lower is better)
Translates to: AGVVSDVAAHHEAGQHLVPHKST*ISPRTL
Trigger: CAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGG...GACGAGATGCTGGCCCGCTTCGTGGTGGGCAGCCACGTCAGACACCACCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAATCCACCTGGCGGCGCTaGCGGGCAGGGCGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: HRASELLQDHFPFQVVAESTWRR*RAGRSS
Trigger: CGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGA...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAATCCACCTGGCGGCGCTaGCGGGCAGGGCGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GKSLAHAAHDAELLCVYESTWRR*RAGRSS
Trigger: CGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGA...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCCTCTCACGGTTCTCTTaGCACATGTCGCTGATGCGC +
Preference number: 5 (lower is better)
Translates to: GLQLSTRSARRMASLERGLSRFS*HMSLMR
Trigger: GCGCATCAGCGACATGTGCAAAGAGAACCGTGAGAG...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCAGCTCGGACATGGATGTGGTaGGTGATGCGGTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: PHWCGSAGSDAAASASAARTWMW*VMRSYL
Trigger: CAAGTACGACCGCATCACCAACCACATCCATGTCCG...AGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp ACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCTTCTTGGCCACGTGGTaGGCTAGGATGACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: TTPLVRISWFRCSCLSERFLATW*ARMTVA
Trigger: TGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAA...GCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCCCCTCCTCCTCCTTGTaGCTGGGGTGGTGTCTGACG +
Preference number: 5 (lower is better)
Translates to: SLQGGDDASLRDGDALLLPSSSL*LGWCLT
Trigger: CGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCGTGGGCCTCCGCCAAGGTCACTGTACATCTaGGCCACCTTGTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: RRLRSHSPADGCARGPPPRSLYI*ATLSWS
Trigger: GGACCAGGACAAGGTGGCCAAGATGTACAGTGACCT...TGGCGGAGGCCCACGCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTCGCCCTCCTATGGGGTaGGCGGCAGCAATGACCGTG +
Preference number: 5 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASRPPMG*AAAMTV
Trigger: CACGGTCATTGCTGCCGCCAACCCCATAGGAGGGCG...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CAA 90 bp TGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCTCCTGGTCCATCTGGTaGAGCTTCGGGTGGACCCTC +
Preference number: 5 (lower is better)
Translates to: CGEWIIRMTHIPPLRLRSSWSIW*SFGWTL
Trigger: GAGGGTCCACCCGAAGCTCAACCAGATGGACCAGGA...GCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTAGGTCACTGTACATCTaGGCCACCTTGTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: ASTTSRAASSKICSSSAGRSLYI*ATLSWS
Trigger: GGACCAGGACAAGGTGGCCAAGATGTACAGTGACCT...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTTCAGCAGCGCTGCCATaGGCCAGCCCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVSAALP*ASPSSS
Trigger: GGAGGAGGAGGGGCTGGCCAATGGCAGCGCTGCTGA...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCTTGCAGCTGTCCACCAGATCTGCGAGGAGAATGGCGTCCTTGGAGCGGGGCAGGTCGTGGCTGAACTaGTTCATCCTGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GLQLSTRSARRMASLERGRSWLN*FILKSS
Trigger: TGAGCTCTTCAGGATGAACAAGTTCAGCCACGACCT...GCCCCGCTCCAAGGACGCCATTCTCCTCGCAGATCTGGTGGACAGCTGCAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCGAGGTGAGAGGATCATaGCCTCGCCGACGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGEVRGS*PRRRWA
Trigger: GGCCCAGCGTCGGCGAGGCAATGATCCTCTCACCTC...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACGCACAGAGTGGCCTTaGAGATCCTCCAGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: RRPLASGEDGSAGHFLNIRTEWP*RSSRFS
Trigger: CGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGCG...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCCGCACAGAGTGGCCTTaGAGATCCTCCAGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARRTEWP*RSSRFS
Trigger: CGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGCG...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCGCTCCTTGAAGACGTaGTGGCCGTGGCTGTCGACG +
Preference number: 5 (lower is better)
Translates to: GTDHPKPESQGILMDGIGRSLKT*WPWLST
Trigger: CGTCGACAGCCACGGCCACAACGTCTTCAAGGAGCG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CAA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGTCGCTGATGCGCTCCTaGAAGACGTTGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLSLMRS*KTLWPW
Trigger: CCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGA...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp ACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCTTGCACTTGTTGCAGTaGTACTTGACCATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: TTPLVRISWFRCSCLSERLHLLQ*YLTMLS
Trigger: GCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAA...GCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATTTGCACTTGTTGCAGTaGTACTTGACCATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDLHLLQ*YLTMLS
Trigger: GCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAA...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GCCAGTACCACCTCCAGGGCAGCCTCATCAAAGATCTGCAGCAGCTCCGCCGGTGGACCCAGGACGAAATaGCACTTGTTGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: ASTTSRAASSKICSSSAGGPRTK*HLLQLY
Trigger: GTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCC...ACCGGCGGAGCTGCTGCAGATCTTTGATGAGGCTGCCCTGGAGGTGGTACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TTGTCCTTCTTGGCCACGTGGTTGGCTAGGATGACAGTGGCAAAGACAGGGAAGCGGCCAGCCGCCACTTaGCCTGGACTCTCCTGGATT +
Preference number: 5 (lower is better)
Translates to: LSFLATWLARMTVAKTGKRPAAT*PGLSWI
Trigger: AATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCG...CTTCCCTGTCTTTGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAAGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTAGGAGAATGGCGTCCTaGGAGCGGGGCAGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: AISPDPSTPSSSSALVLCRRMAS*ERGSRP
Trigger: TGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCT...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCACCTTGTTGTCCTTCTaGGCCACGTGGTTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: SLQGGDDASLRDGDALLLTLLSF*ATWLAR
Trigger: CCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGT...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CAGGGCCAGAGCCAGGCCTCTCTTGATGTCTTCATGACCATAGATGGAAGGAGCTTGCCACCTGGGTTTTaGGGCTCCCCTCCGAACAGG +
Preference number: 5 (lower is better)
Translates to: QGQSQASLDVFMTIDGRSLPPGF*GSPPNR
Trigger: CCTGTTCGGAGGGGAGCCCAAAAACCCAGGTGGCAA...GCTCCTTCCATCTATGGTCATGAAGACATCAAGAGAGGCCTGGCTCTGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAACCCTCCTCCTCCTTGTaGCTGGGGTGGTGTCTGACG +
Preference number: 5 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQPSSSL*LGWCLT
Trigger: CGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCCTCCTCCTCCTTGTaGCTGGGGTGGTGTCTGACG +
Preference number: 5 (lower is better)
Translates to: GTDHPKPESQGILMDGIGPSSSL*LGWCLT
Trigger: CGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGAGCCCCTCCTCCTCCTaGTTGCTGGGGTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: GTDHPKPESQGILMDGIGSPSSS*LLGWCL
Trigger: CAGACACCACCCCAGCAACAAGGAGGAGGAGGGGCT...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATAGCCCCTCCTCCTCCTaGTTGCTGGGGTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHSPSSS*LLGWCL
Trigger: CAGACACCACCCCAGCAACAAGGAGGAGGAGGGGCT...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCAGCCCCTCCTCCTCCTaGTTGCTGGGGTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGSPSSS*LLGWCL
Trigger: CAGACACCACCCCAGCAACAAGGAGGAGGAGGGGCT...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAATCCACGCCATACGTGTaGGGCATGGCGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQSTPYV*GMAGSA
Trigger: TGCTGAGCCCGCCATGCCCAACACGTATGGCGTGGA...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTTCCTGGTCCATCTGGTaGAGCTTCGGGTGGACCCTC +
Preference number: 5 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASSWSIW*SFGWTL
Trigger: GAGGGTCCACCCGAAGCTCAACCAGATGGACCAGGA...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GTGGCCTTTGAGATCCTCCAGGTTCTCGATGCTCTCGATCATCTCCTCGTCCTCGTGCGCAGGAAGTTCTaGAAGCGGTGGTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: VAFEILQVLDALDHLLVLVRRKF*KRWWIS
Trigger: GGAGATCCACCACCGCTTCAAGAACTTCCTGCGCAC...GAGGACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGGATCTCAAAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCCGCTCCTTGAAGACGTaGTGGCCGTGGCTGTCGACG +
Preference number: 5 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGRSLKT*WPWLST
Trigger: CGTCGACAGCCACGGCCACAACGTCTTCAAGGAGCG...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCTCGCTGATGCGCTCCTaGAAGACGTTGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: GMLPVAIDSFLRSLYILASLMRS*KTLWPW
Trigger: CCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGA...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CGACGCCCCCTGGCCAGTGGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTCTCACGGTTCTCTTaGCACATGTCGCTGATGCGC +
Preference number: 5 (lower is better)
Translates to: RRPLASGEDGSAGHFLNILSRFS*HMSLMR
Trigger: GCGCATCAGCGACATGTGCAAAGAGAACCGTGAGAG...TATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACCACTGGCCAGGGGGCGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGGTGATGCGGTCGTACTaGGGGTACATGGCCAGTACC +
Preference number: 5 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLVMRSY*GYMAST
Trigger: GGTACTGGCCATGTACCCCAAGTACGACCGCATCAC...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CTGAGGAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGACGAAATTGCACTTGTaGCAGTTGTACTTGACCATG +
Preference number: 5 (lower is better)
Translates to: LRSPERCAGTVVPSSTTGTKLHL*QLYLTM
Trigger: CATGGTCAAGTACAACTGCAACAAGTGCAATTTCGT...CCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp CCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGCGAGCGCAGCTAGGACGAAATTGCACTaGTTGCAGTTGTACTTGACC +
Preference number: 5 (lower is better)
Translates to: PHWCGSAGSDAAASASAARTKLH*LQLYLT
Trigger: GGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCT...AGCTGCGCTCGCTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATGGTCTCCTCCATGTaGACCTCAAAGGGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGMVSSM*TSKGPA
Trigger: GGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCAT...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCACCTTGTCCGGCCAGCCGCCACTTaGCCTGGACTCTCCTGGATT +
Preference number: 5 (lower is better)
Translates to: ACRHRFFPQVTVHLGHLVRPAAT*PGLSWI
Trigger: AATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCG...GACAAGGTGGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGCGGCCAGCCGCCACTTaGCCTGGACTCTCCTGGATT +
Preference number: 5 (lower is better)
Translates to: RHPAISPDPSTPSSSSALRPAAT*PGLSWI
Trigger: AATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCG...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AGCCTGCAGGGAGGTGACGATGCCAGCCTTCGAGATGGAGATGCTCTGTTGCTCCCGCACAAGAGCACGTaGATATCACCACGTACCTTG +
Preference number: 5 (lower is better)
Translates to: SLQGGDDASLRDGDALLLPHKST*ISPRTL
Trigger: CAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGG...GAGCAACAGAGCATCTCCATCTCGAAGGCTGGCATCGTCACCTCCCTGCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTACGCCCTCCTATGGGGTaGGCGGCAGCAATGACCGTG +
Preference number: 5 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVRPPMG*AAAMTV
Trigger: CACGGTCATTGCTGCCGCCAACCCCATAGGAGGGCG...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACGCCCTCCTATGGGGTaGGCGGCAGCAATGACCGTG +
Preference number: 5 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRRPPMG*AAAMTV
Trigger: CACGGTCATTGCTGCCGCCAACCCCATAGGAGGGCG...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGAGCCCCTCCTCCTCCTaGTTGCTGGGGTGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: TRIPRNPYGWHRASELLQSPSSS*LLGWCL
Trigger: CAGACACCACCCCAGCAACAAGGAGGAGGAGGGGCT...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGTCCACGCCATACGTGTaGGGCATGGCGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: RHPAISPDPSTPSSSSALSTPYV*GMAGSA
Trigger: TGCTGAGCCCGCCATGCCCAACACGTATGGCGTGGA...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp CACCAGAGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTATACATCTTGGCCACCTaGTCCTGGTCCATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: HQRQVGDADMDVVGDAVVYILAT*SWSIWL
Trigger: CAACCAGATGGACCAGGACAAGGTGGCCAAGATGTA...TACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCTCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGACGCGGATGGCCATGTaGACGTCGTCTTCGATCACA +
Preference number: 5 (lower is better)
Translates to: DADMDVVGDAVVLGVHGQTRMAM*TSSSIT
Trigger: TGTGATCGAAGACGACGTCAACATGGCCATCCGCGT...CTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GCTGGTCACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGAAGAGCAACAGCTCATaGTTGTCACGCCGGAATGAA +
Preference number: 5 (lower is better)
Translates to: AGHHPTGADQLVQMQLPQKSNSS*LSRRNE
Trigger: TTCATTCCGGCGTGACAACAATGAGCTGTTGCTCTT...CTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCCTGACACGGACATGGATGTGGTaGGTGATGCGGTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: QKQPEYATHAKRAAALLTRTWMW*VMRSYL
Trigger: CAAGTACGACCGCATCACCAACCACATCCATGTCCG...TGTCAGGAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp CCTCAGCGAGCGCAGCTCCTCCACCAGAGGCAGGTGGGAGATGCGGACATGGATACGAAATTGCACTTGTaGCAGTTGTACTTGACCATG +
Preference number: 5 (lower is better)
Translates to: PQRAQLLHQRQVGDADMDTKLHL*QLYLTM
Trigger: CATGGTCAAGTACAACTGCAACAAGTGCAATTTCGT...ATCCATGTCCGCATCTCCCACCTGCCTCTGGTGGAGGAGCTGCGCTCGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACGGCCAGCCGCCACTTaGCCTGGACTCTCCTGGATT +
Preference number: 5 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTRPAAT*PGLSWI
Trigger: AATCCAGGAGAGTCCAGGCAAAGTGGCGGCTGGCCG...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCTTCTCTCCGAAGGAGAATGGCGTCCTaGGAGCGGGGCAGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: CLHDHRWKEQCWQRSSLRRRMAS*ERGSRP
Trigger: TGGCCGGCTGCCCCGCTCCAAGGACGCCATTCTCCT...TCGGAGAGAAGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGTCCCCTACAGCAACCTaGTTGTCCTTCTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLSPTAT*LSFLAT
Trigger: CGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGA...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTTTGCCACCTGGGTTTTaGGGCTCCCCTCCGAACAGG +
Preference number: 5 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVLPPGF*GSPPNR
Trigger: CCTGTTCGGAGGGGAGCCCAAAAACCCAGGTGGCAA...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCTGCCAAGTCCTCATAGTTCACCACCAGGCTCTCACGGTTCTCTTTGCACATCCACGTACCTTGTGCTaGCCACCTGGGTTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GCQVLIVHHQALTVLFAHPRTLC*PPGFLG
Trigger: GCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTGG...ATGTGCAAAGAGAACCGTGAGAGCCTGGTGGTGAACTATGAGGACTTGGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCCCACGTACCTTGTGCTaGCCACCTGGGTTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GMLPVAIDSFLRSLYILAPRTLC*PPGFLG
Trigger: GCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTGG...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GAGCCCAGAACGCTGCGCTGGCACTGTCGTGCCCTCTTCCACCACAGGGGCACAACTTTCTCAATATACTaGAGAAACTGCGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: EPRTLRWHCRALFHHRGTTFSIY*RNCDFA
Trigger: AGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGT...TGTGCCCCTGTGGTGGAAGAGGGCACGACAGTGCCAGCGCAGCGTTCTGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp GTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACCCTCCTCCTCCTTGTaGCTGGGGTGGTGTCTGACG +
Preference number: 5 (lower is better)
Translates to: VPRVHQVLWFCVHKAQRAPSSSL*LGWCLT
Trigger: CGTCAGACACCACCCCAGCAACAAGGAGGAGGAGGG...TGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGTCAGCAGCGCTGCCATaGGCCAGCCCCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILSAALP*ASPSSS
Trigger: GGAGGAGGAGGGGCTGGCCAATGGCAGCGCTGCTGA...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCATCCACGCCATACGTGTaGGGCATGGCGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPSTPYV*GMAGSA
Trigger: TGCTGAGCCCGCCATGCCCAACACGTATGGCGTGGA...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGTCCTGGTCCATCTGGTaGAGCTTCGGGTGGACCCTC +
Preference number: 5 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKSWSIW*SFGWTL
Trigger: GAGGGTCCACCCGAAGCTCAACCAGATGGACCAGGA...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GATAACTGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGACGCGGATGGCCATGTaGACGTCGTCTTCGATCACA +
Preference number: 5 (lower is better)
Translates to: DNCGEWIIRMTHIPPLRLTRMAM*TSSSIT
Trigger: TGTGATCGAAGACGACGTCAACATGGCCATCCGCGT...CAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACAGTTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp ATAATCCGCATGACTCACATCCCACCCCTGCGACTGAGGAGCCCAGAACGCTGCAGCAACAGCTCATTGTaGTCACGCCGGAATGAAAGG +
Preference number: 5 (lower is better)
Translates to: IIRMTHIPPLRLRSPERCSNSSL*SRRNER
Trigger: CCTTTCATTCCGGCGTGACAACAATGAGCTGTTGCT...GCAGCGTTCTGGGCTCCTCAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS TCA 90 bp TTGGCCCTAGGAGGTCTTCCAGGAACCAATGTGTGTTGGCTGAACTaGAGCTCCTGGCTTCCTGACGCTGAGAAACACCCACCTCTCCTA +
Preference number: 5 (lower is better)
Translates to: LALGGLPGTNVCWLN*SSWLPDAEKHPPLL
Trigger: TAGGAGAGGTGGGTGTTTCTCAGCGTCAGGAAGCCAGGAGCTTCAGTTCAGCCAACACACATTGGTTCCTGGAAGACCTCCTAGGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS CCA 90 bp ATGGGAACCCCAGATCTTCGCAGACTAGGTTCGATGGCCAAGAGCTaGGAAGGAATGGCACCAATACCAGCCTCTGCCAGGGATGCATTT +
Preference number: 5 (lower is better)
Translates to: MGTPDLRRLGSMAKS*EGMAPIPASARDAF
Trigger: AAATGCATCCCTGGCAGAGGCTGGTATTGGTGCCATTCCTTCCCAGCTCTTGGCCATCGAACCTAGTCTGCGAAGATCTGGGGTTCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR CAA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTGAGGTGAGAGGATCATaGCCTCGCCGACGCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLEVRGS*PRRRWA
Trigger: GGCCCAGCGTCGGCGAGGCAATGATCCTCTCACCTC...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474964.5
CDS-3UTR CAA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGCGCACAGAGTGGCCTTaGAGATCCTCCAGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: RHPAISPDPSTPSSSSALRTEWP*RSSRFS
Trigger: CGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGCG...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCCGCACAGAGTGGCCTTaGAGATCCTCCAGGTTCTCG +
Preference number: 5 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGRTEWP*RSSRFS
Trigger: CGAGAACCTGGAGGATCTCAAAGGCCACTCTGTGCG...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp ACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGCGCTCCTTGAAGACGTaGTGGCCGTGGCTGTCGACG +
Preference number: 5 (lower is better)
Translates to: TLVPRVHQVLWFCVHKAQRSLKT*WPWLST
Trigger: CGTCGACAGCCACGGCCACAACGTCTTCAAGGAGCG...CTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTTCGCTGATGCGCTCCTaGAAGACGTTGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: AISPDPSTPSSSSALVLCSLMRS*KTLWPW
Trigger: CCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGA...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCGGACATGGATGTGGTaGGTGATGCGGTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: GTDHPKPESQGILMDGIGRTWMW*VMRSYL
Trigger: CAAGTACGACCGCATCACCAACCACATCCATGTCCG...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CAA 90 bp GATAACTGTGGCGAGTGGATAATCCGCATGACTCACATCCCACCCCTGCGACTGTTGTTGCAGTTGTACTaGACCATGCTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: DNCGEWIIRMTHIPPLRLLLQLY*TMLSWG
Trigger: GCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAA...CAGTCGCAGGGGTGGGATGTGAGTCATGCGGATTATCCACTCGCCACAGTTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp GTGGCCTTTGAGATCCTCCAGGTTCTCGATGCTCTCGATCATCTCCTCGTCCTCTTGTTGCAGTTGTACTaGACCATGCTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: VAFEILQVLDALDHLLVLLLQLY*TMLSWG
Trigger: GCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAA...GAGGACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGGATCTCAAAGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CATAGTTGTTGTGATAGATGCCAGTCAGCTCTATCTCGTCTCCTGGCTTGCAGCATGGTCTCCTCCATGTaGACCTCAAAGGGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: HSCCDRCQSALSRLLACSMVSSM*TSKGPA
Trigger: GGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCAT...GCTGCAAGCCAGGAGACGAGATAGAGCTGACTGGCATCTATCACAACAACTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAATGGTCTCCTCCATGTaGACCTCAAAGGGGCCGGCC +
Preference number: 5 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKMVSSM*TSKGPA
Trigger: GGCCGGCCCCTTTGAGGTCAACATGGAGGAGACCAT...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCTTCTTGGCCACGTGGTaGGCTAGGATGACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: TEGTDHPKPESQGILMDGFLATW*ARMTVA
Trigger: TGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAA...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGTTCTTGGCCACGTGGTaGGCTAGGATGACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: GTDHPKPESQGILMDGIGFLATW*ARMTVA
Trigger: TGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAA...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CAA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAATCCCCTACAGCAACCTaGTTGTCCTTCTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQSPTAT*LSFLAT
Trigger: CGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGA...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAATTGCCACCTGGGTTTTaGGGCTCCCCTCCGAACAGG +
Preference number: 5 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKLPPGF*GSPPNR
Trigger: CCTGTTCGGAGGGGAGCCCAAAAACCCAGGTGGCAA...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AGGCAGCAAAAGCAGCCTGAATACGCAACTCACGCCAAGAGGGCAGCAGCTCTCATATCACCACGTACCTaGTGCTTGCCACCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: RQQKQPEYATHAKRAAALISPRT*CLPPGF
Trigger: AAACCCAGGTGGCAAGCACAAGGTACGTGGTGATAT...GAGAGCTGCTGCCCTCTTGGCGTGAGTTGCGTATTCAGGCTGCTTTTGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp GATGGCCATGTTGACGTCGTCTTCGATCACATAGTCCCGCAGATGGATGCGCGCATATCACCACGTACCTaGTGCTTGCCACCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: DGHVDVVFDHIVPQMDARISPRT*CLPPGF
Trigger: AAACCCAGGTGGCAAGCACAAGGTACGTGGTGATAT...GCGCGCATCCATCTGCGGGACTATGTGATCGAAGACGACGTCAACATGGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAATCCTGGTCCATCTGGTaGAGCTTCGGGTGGACCCTC +
Preference number: 5 (lower is better)
Translates to: GKSLAHAAHDAELLCVYESWSIW*SFGWTL
Trigger: GAGGGTCCACCCGAAGCTCAACCAGATGGACCAGGA...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGGATGCTGCCTGTCGCCATAGATTCTTTCCTCAGGTCACTGTACATCTTGGCCACGCGGATGGCCATGTaGACGTCGTCTTCGATCACA +
Preference number: 5 (lower is better)
Translates to: GMLPVAIDSFLRSLYILATRMAM*TSSSIT
Trigger: TGTGATCGAAGACGACGTCAACATGGCCATCCGCGT...GGCCAAGATGTACAGTGACCTGAGGAAAGAATCTATGGCGACAGGCAGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGTGCGCAGGAAGTTCTaGAAGCGGTGGTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKVRRKF*KRWWIS
Trigger: GGAGATCCACCACCGCTTCAAGAACTTCCTGCGCAC...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTCCTTGAAGACGTaGTGGCCGTGGCTGTCGACG +
Preference number: 5 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLRSLKT*WPWLST
Trigger: CGTCGACAGCCACGGCCACAACGTCTTCAAGGAGCG...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAAGTGATGCGGTCGTACTaGGGGTACATGGCCAGTACC +
Preference number: 5 (lower is better)
Translates to: HRASELLQDHFPFQVVAEVMRSY*GYMAST
Trigger: GGTACTGGCCATGTACCCCAAGTACGACCGCATCAC...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTGTGATGCGGTCGTACTaGGGGTACATGGCCAGTACC +
Preference number: 5 (lower is better)
Translates to: AISPDPSTPSSSSALVLCVMRSY*GYMAST
Trigger: GGTACTGGCCATGTACCCCAAGTACGACCGCATCAC...ACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCTTGTTGCAGTTGTACTaGACCATGCTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: TEGTDHPKPESQGILMDGLLQLY*TMLSWG
Trigger: GCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAA...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGGGACCCAGGACGAAATaGCACTTGTTGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLGPRTK*HLLQLY
Trigger: GTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCC...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp ACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGCCTCAGAACTGCTGCAGATCTCGTCTCCTGGCTaGCAGCTGTCCACCAGATCT +
Preference number: 5 (lower is better)
Translates to: TRIPRNPYGWHRASELLQISSPG*QLSTRS
Trigger: AGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGAT...CTGCAGCAGTTCTGAGGCCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGATCTCGTCTCCTGGCTaGCAGCTGTCCACCAGATCT +
Preference number: 5 (lower is better)
Translates to: RHPAISPDPSTPSSSSALISSPG*QLSTRS
Trigger: AGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGAT...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGTTCTTGGCCACGTGGTaGGCTAGGATGACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALFLATW*ARMTVA
Trigger: TGCCACTGTCATCCTAGCCAACCACGTGGCCAAGAA...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGACCTTGTTGTCCTTCTaGGCCACGTGGTTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKTLLSF*ATWLAR
Trigger: CCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGT...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACCACGTACCTTGTGCTaGCCACCTGGGTTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRPRTLC*PPGFLG
Trigger: GCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTGG...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACCACGTACCTTGTGCTaGCCACCTGGGTTTTTGGGC +
Preference number: 5 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTPRTLC*PPGFLG
Trigger: GCCCAAAAACCCAGGTGGCAAGCACAAGGTACGTGG...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCCCGCACAAGAGCACGTaGATATCACCACGTACCTTG +
Preference number: 5 (lower is better)
Translates to: TEGTDHPKPESQGILMDGPHKST*ISPRTL
Trigger: CAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGG...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCACCGCACAAGAGCACGTaGATATCACCACGTACCTTG +
Preference number: 5 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPPHKST*ISPRTL
Trigger: CAAGGTACGTGGTGATATCAACGTGCTCTTGTGCGG...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GCTGGTCACCACCCCACTGGTGCGGATCAGCTGGTTCAGATGCAGCTGCCTCAGACTTTCTCAATATACTaGAGAAACTGCGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: AGHHPTGADQLVQMQLPQTFSIY*RNCDFA
Trigger: AGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGT...CTGAGGCAGCTGCATCTGAACCAGCTGATCCGCACCAGTGGGGTGGTGACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp ATACTTGAGAAACTGCGACTTCGCTGTGCCAGGGTCTCCGCACAAGAGCACGTTTACATCTTGGCCACCTaGTCCTGGTCCATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: ILEKLRLRCARVSAQEHVYILAT*SWSIWL
Trigger: CAACCAGATGGACCAGGACAAGGTGGCCAAGATGTA...AACGTGCTCTTGTGCGGAGACCCTGGCACAGCGAAGTCGCAGTTTCTCAAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp ACAGAGGGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCTACATCTTGGCCACCTaGTCCTGGTCCATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TEGTDHPKPESQGILMDGYILAT*SWSIWL
Trigger: CAACCAGATGGACCAGGACAAGGTGGCCAAGATGTA...GCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp CCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGAGGGCACTGAGGTCACTGTACATCTaGGCCACCTTGTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: PRVHQVLWFCVHKAQRALRSLYI*ATLSWS
Trigger: GGACCAGGACAAGGTGGCCAAGATGTACAGTGACCT...CAGTGCCCTCTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCACGCGGATGGCCATGTaGACGTCGTCTTCGATCACA +
Preference number: 5 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGTRMAM*TSSSIT
Trigger: TGTGATCGAAGACGACGTCAACATGGCCATCCGCGT...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GTGGCCTTTGAGATCCTCCAGGTTCTCGATGCTCTCGATCATCTCCTCGTCCTCAGGTCGTGGCTGAACTaGTTCATCCTGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: VAFEILQVLDALDHLLVLRSWLN*FILKSS
Trigger: TGAGCTCTTCAGGATGAACAAGTTCAGCCACGACCT...GAGGACGAGGAGATGATCGAGAGCATCGAGAACCTGGAGGATCTCAAAGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS TCA 90 bp CTCCTCCCATGCCTTCTGAGAACATCCAAGGTGATTCCAGGAACATaGCTCAACAGGAAACCCAGGTGTCCCAGGTCCCACTTTCACTGT +
Preference number: 5 (lower is better)
Translates to: LLPCLLRTSKVIPGT*LNRKPRCPRSHFHC
Trigger: ACAGTGAAAGTGGGACCTGGGACACCTGGGTTTCCTGTTGAGTCATGTTCCTGGAATCACCTTGGATGTTCTCAGAAGGCATGGGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473785.1
CDS GCA 90 bp GATGAGGGCAGTGGAAGAGGAAGACATAGGTGGGTACTTAGCACCTaGTGTCTGAGACAGCAAAGAGCTTACCCTAACCAGGGCCCAAAA +
Preference number: 5 (lower is better)
Translates to: DEGSGRGRHRWVLST*CLRQQRAYPNQGPK
Trigger: TTTTGGGCCCTGGTTAGGGTAAGCTCTTTGCTGTCTCAGACAGCAGGTGCTAAGTACCCACCTATGTCTTCCTCTTCCACTGCCCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468414.1
CDS-3UTR CAA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACTCTCACGGTTCTCTTaGCACATGTCGCTGATGCGC +
Preference number: 5 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRLSRFS*HMSLMR
Trigger: GCGCATCAGCGACATGTGCAAAGAGAACCGTGAGAG...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTACTCTCACGGTTCTCTTaGCACATGTCGCTGATGCGC +
Preference number: 5 (lower is better)
Translates to: VLSGDKALGGGKMFSNQVLSRFS*HMSLMR
Trigger: GCGCATCAGCGACATGTGCAAAGAGAACCGTGAGAG...TACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AAACCGAATGCACAAATAAGAGAGTGGGGAAACAGACAGGGAGCAATGGCAGCTGTGATGCGGTCGTACTaGGGGTACATGGCCAGTACC +
Preference number: 5 (lower is better)
Translates to: KPNAQIREWGNRQGAMAAVMRSY*GYMAST
Trigger: GGTACTGGCCATGTACCCCAAGTACGACCGCATCAC...AGCTGCCATTGCTCCCTGTCTGTTTCCCCACTCTCTTATTTGTGCATTCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp GGCAAAAGTCTTGCGCATGCTGCGCATGACGCTGAACTTCTGTGTGTCTATGAACGGACATGGATGTGGTaGGTGATGCGGTCGTACTTG +
Preference number: 5 (lower is better)
Translates to: GKSLAHAAHDAELLCVYERTWMW*VMRSYL
Trigger: CAAGTACGACCGCATCACCAACCACATCCATGTCCG...TTCATAGACACACAGAAGTTCAGCGTCATGCGCAGCATGCGCAAGACTTTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCGGACCCAGGACGAAATaGCACTTGTTGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGGPRTK*HLLQLY
Trigger: GTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCC...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp TCAGCAGCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGGACCCAGGACGAAATaGCACTTGTTGCAGTTGTAC +
Preference number: 5 (lower is better)
Translates to: SAALIQGTEWRQSTRRWQGPRTK*HLLQLY
Trigger: GTACAACTGCAACAAGTGCAATTTCGTCCTGGGTCC...TTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGCTGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp CTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGAATCTCGTCTCCTGGCTaGCAGCTGTCCACCAGATCT +
Preference number: 5 (lower is better)
Translates to: LSGDKALGGGKMFSNQVRISSPG*QLSTRS
Trigger: AGATCTGGTGGACAGCTGCAAGCCAGGAGACGAGAT...TCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACATCCCCTACAGCAACCTaGTTGTCCTTCTTGGCCACG +
Preference number: 5 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTSPTAT*LSFLAT
Trigger: CGTGGCCAAGAAGGACAACAAGGTTGCTGTAGGGGA...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTTTGCCACCTGGGTTTTaGGGCTCCCCTCCGAACAGG +
Preference number: 5 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLLPPGF*GSPPNR
Trigger: CCTGTTCGGAGGGGAGCCCAAAAACCCAGGTGGCAA...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGTACATCTTGGCCACCTaGTCCTGGTCCATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKYILAT*SWSIWL
Trigger: CAACCAGATGGACCAGGACAAGGTGGCCAAGATGTA...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAAGGTCACTGTACATCTaGGCCACCTTGTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTRSLYI*ATLSWS
Trigger: GGACCAGGACAAGGTGGCCAAGATGTACAGTGACCT...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGAGCAACAGCTCATTGTaGTCACGCCGGAATGAAAGG +
Preference number: 5 (lower is better)
Translates to: GTDHPKPESQGILMDGIGSNSSL*SRRNER
Trigger: CCTTTCATTCCGGCGTGACAACAATGAGCTGTTGCT...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CAA 90 bp TTCTCTTTGCACATGTCGCTGATGCGCTCCTTGAAGACGTTGTGGCCGTGGCTGAAGAGCAACAGCTCATaGTTGTCACGCCGGAATGAA +
Preference number: 5 (lower is better)
Translates to: FSLHMSLMRSLKTLWPWLKSNSS*LSRRNE
Trigger: TTCATTCCGGCGTGACAACAATGAGCTGTTGCTCTT...CAGCCACGGCCACAACGTCTTCAAGGAGCGCATCAGCGACATGTGCAAAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAGGAACCAATGTGTGTaGGCTGAACTGAAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: GGKMFSNQVRHTGKASHPRNQCV*AELKLL
Trigger: CAGGAGCTTCAGTTCAGCCAACACACATTGGTTCCT...TGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS-3UTR CAA 90 bp ATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGGTACATGGCCAGTAGGACGAAATTGCACTaGTTGCAGTTGTACTTGACC +
Preference number: 5 (lower is better)
Translates to: MRTWMWLVMRSYLGYMASRTKLH*LQLYLT
Trigger: GGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCT...ACTGGCCATGTACCCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp AGGCAGGTGGGAGATGCGGACATGGATGTGGTTGGTGATGCGGTCGTACTTGGGACTTTCTCAATATACTaGAGAAACTGCGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: RQVGDADMDVVGDAVVLGTFSIY*RNCDFA
Trigger: AGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGT...CCCAAGTACGACCGCATCACCAACCACATCCATGTCCGCATCTCCCACCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGAAGAGCAACAGCTCATaGTTGTCACGCCGGAATGAA +
Preference number: 5 (lower is better)
Translates to: GTDHPKPESQGILMDGIGKSNSS*LSRRNE
Trigger: TTCATTCCGGCGTGACAACAATGAGCTGTTGCTCTT...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS TCA 90 bp ATTCCTGCAAGAGAAGGTGCGGTTGTCAGAAACCTAGGAAGCTGGTaGGGCATGATACAGCTTCCTTTTTACCATCAGGGGCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: IPAREGAVVRNLGSW*GMIQLPFYHQGPSL
Trigger: AAGGGAAGGCCCCTGATGGTAAAAAGGAAGCTGTATCATGCCTCACCAGCTTCCTAGGTTTCTGACAACCGCACCTTCTCTTGCAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472731.1
CDS-3UTR CAA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTTTGCACTTGTTGCAGTaGTACTTGACCATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVLHLLQ*YLTMLS
Trigger: GCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAA...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCTTGCACTTGTTGCAGTaGTACTTGACCATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: DKALGGGKMFSNQVRHTGLHLLQ*YLTMLS
Trigger: GCTCAGCATGGTCAAGTACAACTGCAACAAGTGCAA...GCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCAGGACGAAATTGCACTaGTTGCAGTTGTACTTGACC +
Preference number: 5 (lower is better)
Translates to: STRRWQDVQQPSKTHWQGRTKLH*LQLYLT
Trigger: GGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCT...GCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAACTTGTTCATCCTGACCTTGTTGTCCTTCTaGGCCACGTGGTTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: NCCRIIFLFRSWLNLFILTLLSF*ATWLAR
Trigger: CCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGT...CAGGATGAACAAGTTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp CATAGGGCCTCAGAACTGCTGCAGGATCATTTTCCTTTTCAGGTCGTGGCTGAAATATCACCACGTACCTaGTGCTTGCCACCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: HRASELLQDHFPFQVVAEISPRT*CLPPGF
Trigger: AAACCCAGGTGGCAAGCACAAGGTACGTGGTGATAT...TTCAGCCACGACCTGAAAAGGAAAATGATCCTGCAGCAGTTCTGAGGCCCTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp TGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAAGCAACAGCTCATTGTaGTCACGCCGGAATGAAAGG +
Preference number: 5 (lower is better)
Translates to: WQDVQQPSKTHWQGIPPKSNSSL*SRRNER
Trigger: CCTTTCATTCCGGCGTGACAACAATGAGCTGTTGCT...TTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCAAAGAAGAGCAACAGCTCATaGTTGTCACGCCGGAATGAA +
Preference number: 5 (lower is better)
Translates to: GKMFSNQVRHTGKASHPKKSNSS*LSRRNE
Trigger: TTCATTCCGGCGTGACAACAATGAGCTGTTGCTCTT...CTTTGGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAAGGTCGTGGCTGAACTaGTTCATCCTGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTRSWLN*FILKSS
Trigger: TGAGCTCTTCAGGATGAACAAGTTCAGCCACGACCT...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GGTGAAGATGGCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTTTGTTGCAGTTGTACTaGACCATGCTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GEDGSAGHFLNILEKLRLLLQLY*TMLSWG
Trigger: GCCCCAGCTCAGCATGGTCAAGTACAACTGCAACAA...AAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGCCATCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS-3UTR CAA 90 bp GGCACTGACCACCCCAAACCAGAATCCCAAGGAATCCTTATGGATGGCATAGGGACGAAATTGCACTTGTaGCAGTTGTACTTGACCATG +
Preference number: 5 (lower is better)
Translates to: GTDHPKPESQGILMDGIGTKLHL*QLYLTM
Trigger: CATGGTCAAGTACAACTGCAACAAGTGCAATTTCGT...CCCTATGCCATCCATAAGGATTCCTTGGGATTCTGGTTTGGGGTGGTCAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS-3UTR CAA 90 bp CTGAAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGCAGCAAAAGACCTTGTTGTCCTTCTaGGCCACGTGGTTGGCTAGG +
Preference number: 5 (lower is better)
Translates to: LKTITNIFNQLSGQRQQKTLLSF*ATWLAR
Trigger: CCTAGCCAACCACGTGGCCAAGAAGGACAACAAGGT...CTTTTGCTGCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS-3UTR CAA 90 bp ACCCTAGTACCCCGAGTTCATCAAGTGCTCTGGTTTTGTGTCCATAAAGCACAGATATCACCACGTACCTaGTGCTTGCCACCTGGGTTT +
Preference number: 5 (lower is better)
Translates to: TLVPRVHQVLWFCVHKAQISPRT*CLPPGF
Trigger: AAACCCAGGTGGCAAGCACAAGGTACGTGGTGATAT...CTGTGCTTTATGGACACAAAACCAGAGCACTTGATGAACTCGGGGTACTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AGACATCCTGCTATAAGCCCTGACCCTAGTACCCCGAGTTCATCAAGTGCTCTGACGAAATTGCACTTGTaGCAGTTGTACTTGACCATG +
Preference number: 5 (lower is better)
Translates to: RHPAISPDPSTPSSSSALTKLHL*QLYLTM
Trigger: CATGGTCAAGTACAACTGCAACAAGTGCAATTTCGT...CAGAGCACTTGATGAACTCGGGGTACTAGGGTCAGGGCTTATAGCAGGATGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTCAGCAACCAAGTAAGACAAGGACGAAATTGCACTaGTTGCAGTTGTACTTGACC +
Preference number: 5 (lower is better)
Translates to: EWRQSTRRWQDVQQPSKTRTKLH*LQLYLT
Trigger: GGTCAAGTACAACTGCAACAAGTGCAATTTCGTCCT...TGTCTTACTTGGTTGCTGAACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCACTTTCTCAATATACTaGAGAAACTGCGACTTCGCT +
Preference number: 5 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPTFSIY*RNCDFA
Trigger: AGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGT...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp AGGTGGCAAGATGTTCAGCAACCAAGTAAGACACACTGGCAAGGCATCCCACCCTCCTGGTCATTCATCTaGTCAAATTCATCAATGAGA +
Preference number: 5 (lower is better)
Translates to: RWQDVQQPSKTHWQGIPPSWSFI*SNSSMR
Trigger: TCTCATTGATGAATTTGACAAGATGAATGACCAGGA...GGGTGGGATGCCTTGCCAGTGTGTCTTACTTGGTTGCTGAACATCTTGCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp CTGAAAACGATTACAAACATCTTCAACCAGCTCTCTGGCCAAAGGCAGCAAAAGAGGTCGTGGCTGAACTaGTTCATCCTGAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: LKTITNIFNQLSGQRQQKRSWLN*FILKSS
Trigger: TGAGCTCTTCAGGATGAACAAGTTCAGCCACGACCT...CTTTTGCTGCCTTTGGCCAGAGAGCTGGTTGAAGATGTTTGTAATCGTTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265056.12
CDS TCA 90 bp GCCAGCTCAAATATCGGGGTCACCCACATCACCGTGCTTTCTCCATaGAAAACCACTGAGGTTATGTCATTTGCCTATTTACCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: ASSNIGVTHITVLSP*KTTEVMSFAYLPVY
Trigger: GTAAACAGGTAAATAGGCAAATGACATAACCTCAGTGGTTTTTCATGGAGAAAGCACGGTGATGTGGGTGACCCCGATATTTGAGCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480910.1
CDS-3UTR CAA 90 bp GCTCTGATCCAAGGTACTGAGTGGAGACAAAGCACTCGGAGGTGGCAAGATGTTTCCTGGTCATTCATCTaGTCAAATTCATCAATGAGA +
Preference number: 5 (lower is better)
Translates to: ALIQGTEWRQSTRRWQDVSWSFI*SNSSMR
Trigger: TCTCATTGATGAATTTGACAAGATGAATGACCAGGA...AACATCTTGCCACCTCCGAGTGCTTTGTCTCCACTCAGTACCTTGGATCAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265056.12
ENST00000491422.1
CDS-3UTR CAA 90 bp GCTCGGCTGGACACTTTCTCAATATACTTGAGAAACTGCGACTTCGCTGTGCCATCCTGGTCATTCATCTaGTCAAATTCATCAATGAGA +
Preference number: 5 (lower is better)
Translates to: ARLDTFSIYLRNCDFAVPSWSFI*SNSSMR
Trigger: TCTCATTGATGAATTTGACAAGATGAATGACCAGGA...TGGCACAGCGAAGTCGCAGTTTCTCAAGTATATTGAGAAAGTGTCCAGCCGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS GCA 72 bp CGCCGTCCTCCGTGGCCCGCTCCACCTGGCGGCGCTTaGGGGCAGGGCGCTCCTCGTCCTCCTCATCGCTGT +
Preference number: 6 (lower is better)
Translates to: RRPPWPAPPGGA*GQGAPRPPHRC
Trigger: ACAGCGATGAGGAGGACGAGGAGCGCCCTGCCCGCAAGCGCCGCCAGGTGGAGCGGGCCACGGAGGACGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000491422.1
CDS CCA 72 bp CCAGGCCCCGGCCAGCCTCCCGGTCACGCTGCCGCATaGCCCGCTCTGCTGCCTCCCTCTGACTGGCCGTCA +
Preference number: 6 (lower is better)
Translates to: PGPGQPPGHAAA*PALLPPSDWPS
Trigger: TGACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACCGGGAGGCTGGCCGGGGCCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000480910.1
CDS GCA 72 bp GCCAGCCTCCCGGTCACGCTGCCGCATGGCCCGCTCTaGTGCCTCCCTCTGACTGGCCGTCAGCTCCTCTAC +
Preference number: 6 (lower is better)
Translates to: ASLPVTLPHGPL*CLPLTGRQLLY
Trigger: GTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGACCGGGAGGCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000480910.1
CDS TCA 72 bp CATCAGTACGCCGGGAGCTTCGGCCAGGGCTGGAGGTaGGAGGATCATTGCCTCGCCGACGCTGGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: HQYAGSFGQGWR*EDHCLADAGPG
Trigger: GCCCGGCCCAGCGTCGGCGAGGCAATGATCCTCTCACCTCCAGCCCTGGCCGAAGCTCCCGGCGTACTGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000472731.1
ENST00000474964.5
ENST00000480910.1
CDS CCA 72 bp GCGGGCAGGGCGCTCCTCGTCCTCCTCATCGCTGTCTaGGGAGGCAAGAGACACCATACAGGAGCCCACGGC +
Preference number: 6 (lower is better)
Translates to: AGRALLVLLIAV*GGKRHHTGAHG
Trigger: GCCGTGGGCTCCTGTATGGTGTCTCTTGCCTCCCCAGACAGCGATGAGGAGGACGAGGAGCGCCCTGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474964.5
ENST00000477668.5
CDS CAA 90 bp TCAGTACGCCGGGAGCTTCGGCCAGGGCTGGAGGTGAGAGGATCATaGCCTCGCCGACGCTGGGCCGGGCTGGATGCCATGGTGAAGGAT +
Preference number: 6 (lower is better)
Translates to: SVRRELRPGLEVRGS*PRRRWAGLDAMVKD
Trigger: ATCCTTCACCATGGCATCCAGCCCGGCCCAGCGTCGGCGAGGCAATGATCCTCTCACCTCCAGCCCTGGCCGAAGCTCCCGGCGTACTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265056.12
ENST00000472731.1
ENST00000474964.5
ENST00000480910.1
CDS TCA 72 bp TCACGCTGCCGCATGGCCCGCTCTGCTGCCTCCCTCTaGCTGGCCGTCAGCTCCTCTACGTCCTCATCATCC +
Preference number: 6 (lower is better)
Translates to: SRCRMARSAASL*LAVSSSTSSSS
Trigger: GGATGATGAGGACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGGCAGCGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000480910.1
CDS CCA 72 bp GCTGCCGCATGGCCCGCTCTGCTGCCTCCCTCTGACTaGCCGTCAGCTCCTCTACGTCCTCATCATCCAGAG +
Preference number: 6 (lower is better)
Translates to: AAAWPALLPPSD*PSAPLRPHHPE
Trigger: CTCTGGATGATGAGGACGTAGAGGAGCTGACGGCCAGTCAGAGGGAGGCAGCAGAGCGGGCCATGCGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265056.12
ENST00000468659.1
ENST00000474964.5
ENST00000477668.5
ENST00000480910.1
CDS TCA 72 bp CTCAGAGAAAGTCAGCGAGGGGTCGTAGCGCCCTCCTaGAACACAGGGGAGCACCTCCATCAGGGTGGATTC +
Preference number: 6 (lower is better)
Translates to: LRESQRGVVAPS*NTGEHLHQGGF
Trigger: GAATCCACCCTGATGGAGGTGCTCCCCTGTGTTTCAGGAGGGCGCTACGACCCCTCGCTGACTTTCTCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468414.1
CDS CCA 72 bp CCAGATCTTCGCAGACTAGGTTCGATGGCCAAGAGCTaGGAAGGAATGGCACCAATACCAGCCTCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: PDLRRLGSMAKS*EGMAPIPASAR
Trigger: CCTGGCAGAGGCTGGTATTGGTGCCATTCCTTCCCAGCTCTTGGCCATCGAACCTAGTCTGCGAAGATCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS TCA 72 bp TACCATCAGGGGCCTTCCCTTCTTTCTCTCCACCTGTaGCTCTTGTCCTCCAACACACCAAACCCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: YHQGPSLLSLHL*LLSSNTPNPFQ
Trigger: CTGGAAGGGGTTTGGTGTGTTGGAGGACAAGAGTCACAGGTGGAGAGAAAGAAGGGAAGGCCCCTGATGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472731.1
CDS TCA 72 bp GGAGGTCTTCCAGGAACCAATGTGTGTTGGCTGAACTaGAGCTCCTGGCTTCCTGACGCTGAGAAACACCCA +
Preference number: 6 (lower is better)
Translates to: GGLPGTNVCWLN*SSWLPDAEKHP
Trigger: TGGGTGTTTCTCAGCGTCAGGAAGCCAGGAGCTTCAGTTCAGCCAACACACATTGGTTCCTGGAAGACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS GCA 72 bp GGAAGGAATGGCACCAATACCAGCCTCTGCCAGGGATaGATTTCTGGAGCTTTCCTTCTCTCCGATCTGCTG +
Preference number: 6 (lower is better)
Translates to: GRNGTNTSLCQG*ISGAFLLSDLL
Trigger: CAGCAGATCGGAGAGAAGGAAAGCTCCAGAAATGCATCCCTGGCAGAGGCTGGTATTGGTGCCATTCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS GCA 72 bp CAAGAGCTGGGAAGGAATGGCACCAATACCAGCCTCTaGCAGGGATGCATTTCTGGAGCTTTCCTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: QELGRNGTNTSL*QGCISGAFLLS
Trigger: GGAGAGAAGGAAAGCTCCAGAAATGCATCCCTGGCAGAGGCTGGTATTGGTGCCATTCCTTCCCAGCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS TCA 72 bp TGCCTTCTGAGAACATCCAAGGTGATTCCAGGAACATaGCTCAACAGGAAACCCAGGTGTCCCAGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: CLLRTSKVIPGT*LNRKPRCPRSH
Trigger: GTGGGACCTGGGACACCTGGGTTTCCTGTTGAGTCATGTTCCTGGAATCACCTTGGATGTTCTCAGAAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473785.1
CDS TCA 72 bp AGAGAAGGTGCGGTTGTCAGAAACCTAGGAAGCTGGTaGGGCATGATACAGCTTCCTTTTTACCATCAGGGG +
Preference number: 6 (lower is better)
Translates to: REGAVVRNLGSW*GMIQLPFYHQG
Trigger: CCCCTGATGGTAAAAAGGAAGCTGTATCATGCCTCACCAGCTTCCTAGGTTTCTGACAACCGCACCTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000472731.1
CDS CAA 90 bp AGATGGAAGGAGCAATGCTGGCAAAGATCATTGTATCCCTACAACTaGGCCCTAGGAGGTCTTCCAGGAACCAATGTGTGTTGGCTGAAC +
Preference number: 6 (lower is better)
Translates to: RWKEQCWQRSLYPYN*ALGGLPGTNVCWLN
Trigger: GTTCAGCCAACACACATTGGTTCCTGGAAGACCTCCTAGGGCCAAGTTGTAGGGATACAATGATCTTTGCCAGCATTGCTCCTTCCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS CAA 72 bp GAGCAATGCTGGCAAAGATCATTGTATCCCTACAACTaGGCCCTAGGAGGTCTTCCAGGAACCAATGTGTGT +
Preference number: 6 (lower is better)
Translates to: EQCWQRSLYPYN*ALGGLPGTNVC
Trigger: ACACACATTGGTTCCTGGAAGACCTCCTAGGGCCAAGTTGTAGGGATACAATGATCTTTGCCAGCATTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS CAA 72 bp GACCATAGATGGAAGGAGCAATGCTGGCAAAGATCATaGTATCCCTACAACTTGGCCCTAGGAGGTCTTCCA +
Preference number: 6 (lower is better)
Translates to: DHRWKEQCWQRS*YPYNLALGGLP
Trigger: TGGAAGACCTCCTAGGGCCAAGTTGTAGGGATACAATGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS CAA 90 bp TGTCTTCATGACCATAGATGGAAGGAGCAATGCTGGCAAAGATCATaGTATCCCTACAACTTGGCCCTAGGAGGTCTTCCAGGAACCAAT +
Preference number: 6 (lower is better)
Translates to: CLHDHRWKEQCWQRS*YPYNLALGGLPGTN
Trigger: ATTGGTTCCTGGAAGACCTCCTAGGGCCAAGTTGTAGGGATACAATGATCTTTGCCAGCATTGCTCCTTCCATCTATGGTCATGAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491422.1
CDS CCA 72 bp AGAGATGGCATAGAAGAGCCACCAAAACAAGAGGTCTaGAACTCAGATGTGGAACAGACAGTATACAAGACA +
Preference number: 6 (lower is better)
Translates to: RDGIEEPPKQEV*NSDVEQTVYKT
Trigger: TGTCTTGTATACTGTCTGTTCCACATCTGAGTTCCAGACCTCTTGTTTTGGTGGCTCTTCTATGCCATCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480910.1
CDS TCA 72 bp CACCCACATCACCGTGCTTTCTCCATGAAAAACCACTaGGGTTATGTCATTTGCCTATTTACCTGTTTACTG +
Preference number: 6 (lower is better)
Translates to: HPHHRAFSMKNH*GYVICLFTCLL
Trigger: CAGTAAACAGGTAAATAGGCAAATGACATAACCTCAGTGGTTTTTCATGGAGAAAGCACGGTGATGTGGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480910.1
CDS TCA 72 bp AATATCGGGGTCACCCACATCACCGTGCTTTCTCCATaGAAAACCACTGAGGTTATGTCATTTGCCTATTTA +
Preference number: 6 (lower is better)
Translates to: NIGVTHITVLSP*KTTEVMSFAYL
Trigger: TAAATAGGCAAATGACATAACCTCAGTGGTTTTTCATGGAGAAAGCACGGTGATGTGGGTGACCCCGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480910.1