RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCM10 (Homo sapiens)

Ensembl gene IDs: ENSG00000065328

Ensembl transcript IDs: ENST00000378694.1, ENST00000378714.8, ENST00000459751.1, ENST00000479669.5, ENST00000481292.1, ENST00000484800.6, ENST00000485659.1

Found 424 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTTTTaGCGGCGTCAATCAGGAATCAATGGACAATACACAGCCAATCCT +
Preference number: 1 (lower is better)
Translates to: ESKQAKLMGLTSICF*RRQSGINGQYTANP
Trigger: AGGATTGGCTGTGTATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
3UTR-3UTR GCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCCCGCGATCGCACTACTaGACTCCAGCCAGGGTGACA +
Preference number: 2 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIPRSHY*TPARVT
Trigger: TGTCACCCTGGCTGGAGTGCAGTAGTGCGATCGCGG...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR CCA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTAATGCAAAAATTAGCTaGGCTTGGTCACGCACGCCT +
Preference number: 2 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCNAKIS*AWSRTP
Trigger: AGGCGTGCGTGACCAAGCCCAGCTAATTTTTGCATT...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR CCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAAATGCAAAAATTAGCTaGGCTTGGTCACGCACGCCT +
Preference number: 2 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQNAKIS*AWSRTP
Trigger: AGGCGTGCGTGACCAAGCCCAGCTAATTTTTGCATT...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR CCA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTAGGTCAAATGATATTTaGAAAACCAGGTTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCRSNDI*KTRLPR
Trigger: TCTGGGCAACCTGGTTTTCCAAATATCATTTGACCT...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR GCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAACACAGCCAATCCTTTaGTTTCCAGAGTCACAGGAG +
Preference number: 2 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSTQPIL*FPESQE
Trigger: CTCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGT...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
3UTR-3UTR GCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACATTTGCTGTGGTAATTTaGATAGGGGTTGACCTTTCA +
Preference number: 2 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITFAVVI*IGVDLS
Trigger: TGAAAGGTCAACCCCTATGCAAATTACCACAGCAAA...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR TCA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATGAAGAATCTCCTGAATaGAACCTTTGCTGTGGTAAT +
Preference number: 2 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYEESPE*NLCCGN
Trigger: ATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTC...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR GCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAATTTGCTGTGGTAATTTaGATAGGGGTTGACCTTTCA +
Preference number: 2 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQFAVVI*IGVDLS
Trigger: TGAAAGGTCAACCCCTATGCAAATTACCACAGCAAA...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR CCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCTCAATCAGGAATCAATaGACAATACACAGCCAATCC +
Preference number: 2 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEISIRNQ*TIHSQS
Trigger: GGATTGGCTGTGTATTGTCCATTGATTCCTGATTGA...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR CCA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCTTCTCCTCCTATCTTTaGACCAGTCTTTTCCTAGAA +
Preference number: 2 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIIFSSYL*TSLFLE
Trigger: TTCTAGGAAAAGACTGGTCCAAAGATAGGAGGAGAA...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378694.1
3UTR-3UTR CAA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAAGGTGGGAGGACTGCTaGAGCCCAGGGAAGCCAAGG +
Preference number: 3 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQRWEDC*SPGKPR
Trigger: CCTTGGCTTCCCTGGGCTCAAGCAGTCCTCCCACCT...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR CAA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTACACAGCCAATCCTTaGCTTTCCAGAGTCACAGGA +
Preference number: 3 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSYTANP*LSRVTG
Trigger: TCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGTA...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
3UTR-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTGGGCTTAACAAGCATTaGTTTTTGACGGCGTCAATC +
Preference number: 3 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCGLNKH*FLTASI
Trigger: GATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR-3UTR CAA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGAACAAGCATTTGTTTTaGACGGCGTCAATCAGGAAT +
Preference number: 3 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSNKHLF*TASIRN
Trigger: ATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTT...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
3UTR TCA 72 bp CAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTTTTaGCGGCGTCAATCAGGAATCAATGGACAATACACA +
Preference number: 3 (lower is better)
Translates to: QAKLMGLTSICF*RRQSGINGQYT
Trigger: TGTGTATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTTGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
3UTR-3UTR CAA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAATACACAGCCAATCCTTaGCTTTCCAGAGTCACAGGA +
Preference number: 3 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKYTANP*LSRVTG
Trigger: TCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGTA...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
3UTR-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCACATGTTCTTCTCCTCTaGGTAACAGAGTTTCTCCTC +
Preference number: 3 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSHVLLL*VTEFLL
Trigger: GAGGAGAAACTCTGTTACCAAGAGGAGAAGAACATG...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000378694.1
CDS-3UTR CCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCCACCTCGCCCCAGCTTaGGCGTCATTGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGHLAPA*ASLWPG
Trigger: CCCCGGCCACAATGACGCCCAAGCTGGGGCGAGGTG...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATGCTTGGGCGTCATTGTaGCCGGGGCTCCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYAWASL*PGLPPA
Trigger: GGCTGGAGGGAGCCCCGGCCACAATGACGCCCAAGC...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATAGGCACAGCCGTTCTTTaGGGCTGGTGCCTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIGTAVL*GWCLCG
Trigger: CCCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCC...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGCCGCGATCGCACTACTaGACTCCAGCCAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSPRSHY*TPARVT
Trigger: TGTCACCCTGGCTGGAGTGCAGTAGTGCGATCGCGG...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATCTCGGATCCTGTCCGTaGAGGCTGAGCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYLGSCP*RLSRGL
Trigger: CAGCCCCCTGCTCAGCCTCCACGGACAGGATCCGAG...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACAGGGCTCCCTCCAGCCTaGGGAACTCGGATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITGLPPA*GTRILS
Trigger: GGACAGGATCCGAGTTCCCCAGGCTGGAGGGAGCCC...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATGGGCTCCCTCCAGCCTaGGGAACTCGGATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYGLPPA*GTRILS
Trigger: GGACAGGATCCGAGTTCCCCAGGCTGGAGGGAGCCC...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGCTTGGGCGTCATTGTaGCCGGGGCTCCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASAWASL*PGLPPA
Trigger: GGCTGGAGGGAGCCCCGGCCACAATGACGCCCAAGC...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTCACCTCGCCCCAGCTTaGGCGTCATTGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASHLAPA*ASLWPG
Trigger: CCCCGGCCACAATGACGCCCAAGCTGGGGCGAGGTG...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAAGGCACAGCCGTTCTTTaGGGCTGGTGCCTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQGTAVL*GWCLCG
Trigger: CCCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCC...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACACCTGTCCGTGGAGGCTaGGCAGGGGGCTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITPVRGG*AGGCLD
Trigger: ATCAAGACAGCCCCCTGCTCAGCCTCCACGGACAGG...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTCCTACGACAGTCCCCTaGTCCGTCTTCCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICPTTVP*SVFQSA
Trigger: AGCGCTCTGGAAGACGGAGCAGGGGACTGTCGTAGG...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGCCAGAGAAGGTGGACTaGAGATCCGCACGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSPEKVD*RSARFA
Trigger: CGCAAAGCGTGCGGATCTGCAGTCCACCTTCTCTGG...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTCGTTTTCTCTCGCCTaGGGGCAGGAGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICSFSLA*GQEQGG
Trigger: TCCTCCCTGCTCCTGCCCCCAGGCGAGAGAAAACGA...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAGCTTGGGCGTCATTGTaGCCGGGGCTCCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQAWASL*PGLPPA
Trigger: GGCTGGAGGGAGCCCCGGCCACAATGACGCCCAAGC...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACACCTACGACAGTCCCCTaGTCCGTCTTCCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITPTTVP*SVFQSA
Trigger: AGCGCTCTGGAAGACGGAGCAGGGGACTGTCGTAGG...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCCTACGACAGTCCCCTaGTCCGTCTTCCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCPTTVP*SVFQSA
Trigger: AGCGCTCTGGAAGACGGAGCAGGGGACTGTCGTAGG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCCGCAAATTCACAGTCTaGGTGCACGGCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGRKFTV*VHGSPF
Trigger: GAATGGAGAGCCGTGCACGCAGACTGTGAATTTGCG...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACCCAGAGAAGGTGGACTaGAGATCCGCACGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDPEKVD*RSARFA
Trigger: CGCAAAGCGTGCGGATCTGCAGTCCACCTTCTCTGG...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCCAGTGGTATTCATGCTaGTCACTGACGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGQWYSC*SLTQVS
Trigger: GGAGACCTGCGTCAGTGAGCAGCATGAATACCACTG...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTGCCAGTGGTATTCATaGTGCTCACTGACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGCQWYS*CSLTQV
Trigger: GACCTGCGTCAGTGAGCAGCATGAATACCACTGGCA...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTCTACAGGGGATTTTTaGAGACGGGCTGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGSTGDF*RRAGLA
Trigger: AGCAAGCCCAGCCCGTCTGCAAAAATCCCCTGTAGA...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484800.6
CDS-3UTR CCA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATATCGTTTTCTCTCGCCTaGGGGCAGGAGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNISFSLA*GQEQGG
Trigger: TCCTCCCTGCTCCTGCCCCCAGGCGAGAGAAAACGA...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTCCTCTCCTTAAGAGGTaGCCGGGGAGACTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCPLLKR*PGRLLR
Trigger: CCTGAGAAGTCTCCCCGGCCACCTCTTAAGGAGAGG...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCCTCGGATCCTGTCCGTaGAGGCTGAGCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEILGSCP*RLSRGL
Trigger: CAGCCCCCTGCTCAGCCTCCACGGACAGGATCCGAG...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCACCTCGCCCCAGCTTaGGCGTCATTGTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNHLAPA*ASLWPG
Trigger: CCCCGGCCACAATGACGCCCAAGCTGGGGCGAGGTG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTCATGGGGTTGGCATTaGGGATCCCTACGACAGTCC +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICSWGWH*GSLRQS
Trigger: GGACTGTCGTAGGGATCCTCAATGCCAACCCCATGA...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAACCTGTCCGTGGAGGCTaGGCAGGGGGCTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQPVRGG*AGGCLD
Trigger: ATCAAGACAGCCCCCTGCTCAGCCTCCACGGACAGG...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGATCCGCTGCTTCTGTTaGTTCAAGAGTGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSIRCFC*FKSAEA
Trigger: GGCCTCAGCACTCTTGAAGCAACAGAAGCAGCGGAT...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATAGGCGCACGTCTTaGATGTCACGACACGGCACT +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSYRRTS*MSRHGT
Trigger: AGTGCCGTGTCGTGACATGCAAGACGTGCGCCTATA...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTGCCAGTGGTATTCATaGTGCTCACTGACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSCQWYS*CSLTQV
Trigger: GACCTGCGTCAGTGAGCAGCATGAATACCACTGGCA...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATCCGCGATCGCACTACTaGACTCCAGCCAGGGTGACA +
Preference number: 4 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYPRSHY*TPARVT
Trigger: TGTCACCCTGGCTGGAGTGCAGTAGTGCGATCGCGG...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp GAGAAAACTGAAGCCCAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCATTCGAGCCACCCTCTTaGTTCTTGGTAGCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EKTEAQKLSYLPGVRIKPFEPPS*FLVAQG
Trigger: TCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAA...TGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTGGGCTTCAGTTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATGTCCTCCAGAGAAGGTaGACTGCAGATCCGCACGCT +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYVLQRR*TADPHA
Trigger: AGCGTGCGGATCTGCAGTCCACCTTCTCTGGAGGAC...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCGTTGTTTTAAGTTCCTaGCTCCACACGTCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGVVLSS*LHTSAG
Trigger: ACCTGCCGACGTGTGGAGCCAGGAACTTAAAACAAC...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAACTCGGATCCTGTCCGTaGAGGCTGAGCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKLGSCP*RLSRGL
Trigger: CAGCCCCCTGCTCAGCCTCCACGGACAGGATCCGAG...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAGGGCTCCCTCCAGCCTaGGGAACTCGGATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKGLPPA*GTRILS
Trigger: GGACAGGATCCGAGTTCCCCAGGCTGGAGGGAGCCC...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTCCACACAGATGGGTTaGGTCGTTTCCCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSSTQMG*VVSPEL
Trigger: AAGTTCTGGGGAAACGACTCAACCCATCTGTGTGGA...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATATCATGGGGTTGGCATTaGGGATCCCTACGACAGTCC +
Preference number: 4 (lower is better)
Translates to: GLNKHLFLTASIRNQWTISWGWH*GSLRQS
Trigger: GGACTGTCGTAGGGATCCTCAATGCCAACCCCATGA...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCGCTCTCAACTTCACTTaGGCTCTGCAGAAATCGCTT +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGALNFT*ALQKSL
Trigger: AAGCGATTTCTGCAGAGCTCAAGTGAAGTTGAGAGC...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCCTGTCCGTGGAGGCTaGGCAGGGGGCTGTCTTGAT +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNPVRGG*AGGCLD
Trigger: ATCAAGACAGCCCCCTGCTCAGCCTCCACGGACAGG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAAAGGTCTCCAGCAGCTTaGAGTGGGTATAGGCGCACG +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQRSPAA*SGYRRT
Trigger: CGTGCGCCTATACCCACTTCAAGCTGCTGGAGACCT...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCAATTCACAGTCTGCGTaGACGGCTCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGNSQSA*TALHSS
Trigger: AGAAGAATGGAGAGCCGTGCACGCAGACTGTGAATT...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTCAGATCCGCACGCTTTaGGCTGAGCTTCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICQIRTL*AELLVL
Trigger: CAGTACAAGAAGCTCAGCGCAAAGCGTGCGGATCTG...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTATCCGCTGCTTCTGTTaGTTCAAGAGTGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCIRCFC*FKSAEA
Trigger: GGCCTCAGCACTCTTGAAGCAACAGAAGCAGCGGAT...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACTATAGGCGCACGTCTTaGATGTCACGACACGGCACT +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDYRRTS*MSRHGT
Trigger: AGTGCCGTGTCGTGACATGCAAGACGTGCGCCTATA...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp GAGAAAACTGAAGCCCAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCACAGTGGTATTCATGCTaGTCACTGACGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EKTEAQKLSYLPGVRIKPQWYSC*SLTQVS
Trigger: GGAGACCTGCGTCAGTGAGCAGCATGAATACCACTG...TGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTGGGCTTCAGTTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCACACAGCCAATCCTTTaGTTTCCAGAGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGTQPIL*FPESQE
Trigger: CTCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGT...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCGTTTTCTCTCGCCTaGGGGCAGGAGCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSESFSLA*GQEQGG
Trigger: TCCTCCCTGCTCCTGCCCCCAGGCGAGAGAAAACGA...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATATTCGAGCCACCCTCTTaGTTCTTGGTAGCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIFEPPS*FLVAQG
Trigger: TCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAA...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTATCGTCTGTAGGGGTTaGGAGGGTGCACTTGTCATC +
Preference number: 4 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCIVCRG*EGALVI
Trigger: GATGACAAGTGCACCCTCCCAACCCCTACAGACGAT...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTAGGCTTCCACACAGATaGGTTGAGTCGTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICRLPHR*VESFPQ
Trigger: CTGGGGAAACGACTCAACCCATCTGTGTGGAAGCCT...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCAATGCAAAAATTAGCTaGGCTTGGTCACGCACGCCT +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGNAKIS*AWSRTP
Trigger: AGGCGTGCGTGACCAAGCCCAGCTAATTTTTGCATT...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATACCTCTCCTTAAGAGGTaGCCGGGGAGACTTCTCTAC +
Preference number: 4 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIPLLKR*PGRLLY
Trigger: GTAGAGAAGTCTCCCCGGCCACCTCTTAAGGAGAGG...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484800.6
3UTR CAA 72 bp CAATCAGGAATCAATGGACAATACACAGCCAATCCTTaGCTTTCCAGAGTCACAGGAGGCCAGGAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: QSGINGQYTANP*LSRVTGGQEVC
Trigger: ACAGACTTCCTGGCCTCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGTATTGTCCATTGATTCCTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTCCACACAGATGGGTTaGGTCGTTTCCCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICSTQMG*VVSPEL
Trigger: AAGTTCTGGGGAAACGACTCAACCCATCTGTGTGGA...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAAGCCTGGACATGGTACTaGCAGTACTCACAGTCACGC +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQAWTWY*QYSQSR
Trigger: GCGTGACTGTGAGTACTGTCAGTACCATGTCCAGGC...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACGGTCCATCAGTTCCTTaGACTCCTCAGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDGPSVP*TPQSKT
Trigger: TGTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACC...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTCGAAGGAGGCTCAGATaGCCAGATGAGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICRRRLR*PDEQCR
Trigger: TCTACATTGCTCATCTGGGCATCTGAGCCTCCTTCG...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATACGCAAATTCACAGTCTaGGTGCACGGCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIRKFTV*VHGSPF
Trigger: GAATGGAGAGCCGTGCACGCAGACTGTGAATTTGCG...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCCCAGAGAAGGTGGACTaGAGATCCGCACGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIPEKVD*RSARFA
Trigger: CGCAAAGCGTGCGGATCTGCAGTCCACCTTCTCTGG...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATATATAGGCGCACGTCTTaGATGTCACGACACGGCACT +
Preference number: 4 (lower is better)
Translates to: LPRWKNLLNETFAVVICIYRRTS*MSRHGT
Trigger: AGTGCCGTGTCGTGACATGCAAGACGTGCGCCTATA...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTGTCTGTCCAAGGAGATaGTTCTGTTTCCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICVCPRR*FCFHRD
Trigger: GTCCCTGTGGAAACAGAAGCATCTCCTTGGACAGAC...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGACACAGCCAATCCTTTaGTTTCCAGAGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSTQPIL*FPESQE
Trigger: CTCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGT...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCCCTCTCCTTAAGAGGTaGCCGGGGAGACTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIPLLKR*PGRLLR
Trigger: CCTGAGAAGTCTCCCCGGCCACCTCTTAAGGAGAGG...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATAATCGTCTGTAGGGGTTaGGAGGGTGCACTTGTCATC +
Preference number: 4 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIIVCRG*EGALVI
Trigger: GATGACAAGTGCACCCTCCCAACCCCTACAGACGAT...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAAGGCTTCCACACAGATaGGTTGAGTCGTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPRWKNLLNETFAVVICIRLPHR*VESFPQ
Trigger: CTGGGGAAACGACTCAACCCATCTGTGTGGAAGCCT...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTAAGGCTTCCACACAGATaGGTTGAGTCGTTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLRLPHR*VESFPQ
Trigger: CTGGGGAAACGACTCAACCCATCTGTGTGGAAGCCT...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTCTTGTTCATTTCTGTaGAGGATACTCGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICSCSFL*RILEAA
Trigger: GGCGGCCTCGAGTATCCTCCACAGAAATGAACAAGA...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCCTCTGAACCATCCTTaGGCTTCATGGGGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCPLNHP*ASWGWH
Trigger: ATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCGTCCTCCAGAGAAGGTaGACTGCAGATCCGCACGCT +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIVLQRR*TADPHA
Trigger: AGCGTGCGGATCTGCAGTCCACCTTCTCTGGAGGAC...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGGCGGGCAAACTTCTTTaGAATTCGTCCTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSAGKLL*NSSSRE
Trigger: TTCTCTGGAGGACGAATTCCAAAGAAGTTTGCCCGC...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTGTTGTTTTAAGTTCCTaGCTCCACACGTCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCVVLSS*LHTSAG
Trigger: ACCTGCCGACGTGTGGAGCCAGGAACTTAAAACAAC...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTCAAGAGGACAGTTGTaGCAGGAAACTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICSRGQL*QETSKE
Trigger: CTCCTTCGAAGTTTCCTGTCACAACTGTCCTCTTGA...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATATCCACACAGATGGGTTaGGTCGTTTCCCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNISTQMG*VVSPEL
Trigger: AAGTTCTGGGGAAACGACTCAACCCATCTGTGTGGA...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTCCAGAGCGCTTTGTaGACTTCTCCAAATAAGAAC +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGFQSAL*TSPNKN
Trigger: GTTCTTATTTGGAGAAGTTCACAAAGCGCTCTGGAA...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCGCCTGGACATGGTACTaGCAGTACTCACAGTCACGC +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIAWTWY*QYSQSR
Trigger: GCGTGACTGTGAGTACTGTCAGTACCATGTCCAGGC...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATAGGTCCATCAGTTCCTTaGACTCCTCAGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIGPSVP*TPQSKT
Trigger: TGTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACC...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTAGGTCCATCAGTTCCTTaGACTCCTCAGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLGPSVP*TPQSKT
Trigger: TGTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACC...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATTGCTTCAAGAGTGCTaGGGCCGAGATGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLLLQEC*GRDGLD
Trigger: ATCAAGTCCATCTCGGCCTCAGCACTCTTGAAGCAA...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTGGTCTTGGTGGTGGTaGCTCATCATAAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSWSWWW*LIIKEN
Trigger: GTTCTCTTTTATGATGAGTCACCACCACCAAGACCA...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAAGGTCTCCAGCAGCTTaGAGTGGGTATAGGCGCACG +
Preference number: 4 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKRSPAA*SGYRRT
Trigger: CGTGCGCCTATACCCACTTCAAGCTGCTGGAGACCT...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAAGGTCTCCAGCAGCTTaGAGTGGGTATAGGCGCACG +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSRSPAA*SGYRRT
Trigger: CGTGCGCCTATACCCACTTCAAGCTGCTGGAGACCT...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTCCACAGGGACATTTaGAAAACCTCTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGFHRDI*KTSSHH
Trigger: ATGGTGTGAAGAGGTTTTTCAAATGTCCCTGTGGAA...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACAATTCACAGTCTGCGTaGACGGCTCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDNSQSA*TALHSS
Trigger: AGAAGAATGGAGAGCCGTGCACGCAGACTGTGAATT...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGATCTCCAACATCCGCTaGTTCTGTTGCTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSISNIR*FCCFKS
Trigger: ACTCTTGAAGCAACAGAAGCAGCGGATGTTGGAGAT...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACAGTCTGTCCAAGGAGATaGTTCTGTTTCCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITVCPRR*FCFHRD
Trigger: GTCCCTGTGGAAACAGAAGCATCTCCTTGGACAGAC...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTAGTCTGTCCAAGGAGATaGTTCTGTTTCCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLVCPRR*FCFHRD
Trigger: GTCCCTGTGGAAACAGAAGCATCTCCTTGGACAGAC...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATCCACAGTTACTGCAGTaGTTGTTCGGGAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYPQLLQ*LFGSLS
Trigger: GGACAGACTCCCGAACAAGCACTGCAGTAACTGTGG...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATTCGAGCCACCCTCTTaGTTCTTGGTAGCGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSEFEPPS*FLVAQG
Trigger: TCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAA...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTTGAAGATGAGCTTTTaGGATCTGGAGGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSLKMSF*DLEVKP
Trigger: AGGCTTCACCTCCAGATCCCAAAAGCTCATCTTCAA...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACATCTTGTTCATTTCTGTaGAGGATACTCGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITSCSFL*RILEAA
Trigger: GGCGGCCTCGAGTATCCTCCACAGAAATGAACAAGA...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATCCTCTGAACCATCCTTaGGCTTCATGGGGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYPLNHP*ASWGWH
Trigger: ATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGG...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTCCTCTGAACCATCCTTaGGCTTCATGGGGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASPLNHP*ASWGWH
Trigger: ATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGG...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAGTCCTCCAGAGAAGGTaGACTGCAGATCCGCACGCT +
Preference number: 4 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKVLQRR*TADPHA
Trigger: AGCGTGCGGATCTGCAGTCCACCTTCTCTGGAGGAC...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTAGTTGTTTTAAGTTCCTaGCTCCACACGTCGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLVVLSS*LHTSAG
Trigger: ACCTGCCGACGTGTGGAGCCAGGAACTTAAAACAAC...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp GGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATACAACTTATATCAAGAGGACAGTTGTaGCAGGAAACTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: GIQIQLTLSLYKHIIQLISRGQL*QETSKE
Trigger: CTCCTTCGAAGTTTCCTGTCACAACTGTCCTCTTGA...TATAAGTTGTATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCATCATGGGGTTGGCATTaGGGATCCCTACGACAGTCC +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSSWGWH*GSLRQS
Trigger: GGACTGTCGTAGGGATCCTCAATGCCAACCCCATGA...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAGCCTGGACATGGTACTaGCAGTACTCACAGTCACGC +
Preference number: 4 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKAWTWY*QYSQSR
Trigger: GCGTGACTGTGAGTACTGTCAGTACCATGTCCAGGC...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTTTGCTTCAAGAGTGCTaGGGCCGAGATGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASLLQEC*GRDGLD
Trigger: ATCAAGTCCATCTCGGCCTCAGCACTCTTGAAGCAA...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTGCTCTCAACTTCACTTaGGCTCTGCAGAAATCGCTT +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCALNFT*ALQKSL
Trigger: AAGCGATTTCTGCAGAGCTCAAGTGAAGTTGAGAGC...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp GAGAAAACTGAAGCCCAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCATGGTCTTGGTGGTGGTaGCTCATCATAAAAGAGAAC +
Preference number: 4 (lower is better)
Translates to: EKTEAQKLSYLPGVRIKPWSWWW*LIIKEN
Trigger: GTTCTCTTTTATGATGAGTCACCACCACCAAGACCA...TGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTGGGCTTCAGTTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACGATGGAAGAATCTCCTaGATGAAACCTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDDGRIS*MKPLLW
Trigger: CCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATC...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp GAGAAAACTGAAGCCCAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAGATGGAAGAATCTCCTaGATGAAACCTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: EKTEAQKLSYLPGVRIKPDGRIS*MKPLLW
Trigger: CCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATC...TGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTGGGCTTCAGTTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTACTTCCTCCTCATCCATaGTGTCAAGAGGACAGTTGT +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLLPPHP*CQEDSC
Trigger: ACAACTGTCCTCTTGACAGCATGGATGAGGAGGAAG...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp GAGAAAACTGAAGCCCAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAATTTTCTTCCAGCAGTaGGGTCAGCAGAGACAGATT +
Preference number: 4 (lower is better)
Translates to: EKTEAQKLSYLPGVRIKPIFFQQ*GQQRQI
Trigger: AATCTGTCTCTGCTGACCGCACTGCTGGAAGAAAAT...TGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTGGGCTTCAGTTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTACAGACGGGCTGGGCTTaGTGTCTGTTTAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLQTGWA*CLFNCC
Trigger: ACAACAATTAAACAGACAGCAAGCCCAGCCCGTCTG...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCTTCTCAGGGGATTTTTaGAGACGGGCTGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIFSGDF*RRAGLA
Trigger: AGCAAGCCCAGCCCGTCTGCAAAAATCCCCTGAGAA...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCCAGATCCGCACGCTTTaGGCTGAGCTTCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIQIRTL*AELLVL
Trigger: CAGTACAAGAAGCTCAGCGCAAAGCGTGCGGATCTG...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTGGTATTCCGAGTTTTTaGCGTGTTTCCTGGATGATC +
Preference number: 4 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCGIPSF*RVSWMI
Trigger: GATCATCCAGGAAACACGGCAAAAACTCGGAATACC...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTACTCTTCACACCATCATaGCAGTGGTATTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLLFTPS*QWYSCC
Trigger: GCAGCATGAATACCACTGGCATGATGGTGTGAAGAG...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCTCTTCACACCATCATaGCAGTGGTATTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCLFTPS*QWYSCC
Trigger: GCAGCATGAATACCACTGGCATGATGGTGTGAAGAG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAACCACAGTTACTGCAGTaGTTGTTCGGGAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQPQLLQ*LFGSLS
Trigger: GGACAGACTCCCGAACAAGCACTGCAGTAACTGTGG...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACTTGAAGATGAGCTTTTaGGATCTGGAGGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDLKMSF*DLEVKP
Trigger: AGGCTTCACCTCCAGATCCCAAAAGCTCATCTTCAA...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTTCTTGTTCATTTCTGTaGAGGATACTCGAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASSCSFL*RILEAA
Trigger: GGCGGCCTCGAGTATCCTCCACAGAAATGAACAAGA...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTAGCGGGCAAACTTCTTTaGAATTCGTCCTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLAGKLL*NSSSRE
Trigger: TTCTCTGGAGGACGAATTCCAAAGAAGTTTGCCCGC...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACTTTTGCCGTGTTTCCTaGATGATCAAGTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDFCRVS*MIKFVP
Trigger: GGGCACAAACTTGATCATCCAGGAAACACGGCAAAA...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCAAGACAGGCTCTTCTaGGGTATTCCGAGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCQDRLF*GIPSFC
Trigger: GCAAAAACTCGGAATACCCCAGAAGAGCCTGTCTTG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATAGATGGACTTGATGGCTaGTTTTGGGCTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIDGLDG*FWAPHN
Trigger: ATTATGGGGAGCCCAAAACCAGCCATCAAGTCCATC...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp GGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATACAACTTATAACACCATCATGCCAGTaGTATTCATGCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GIQIQLTLSLYKHIIQLITPSCQ*YSCCSL
Trigger: CAGTGAGCAGCATGAATACCACTGGCATGATGGTGT...TATAAGTTGTATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCAGGTCAAATGATATTTaGAAAACCAGGTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGRSNDI*KTRLPR
Trigger: TCTGGGCAACCTGGTTTTCCAAATATCATTTGACCT...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
3UTR CAA 72 bp GCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTTTaGACGGCGTCAATCAGGAATCAATGGACAATACAC +
Preference number: 4 (lower is better)
Translates to: AGKAYGLNKHLF*TASIRNQWTIH
Trigger: GTGTATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGGCTACTTACCTGGAGTaGGAATTAAGCCAAATTCTT +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSATYLE*ELSQIL
Trigger: AAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGC...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAACGAAGGAGGCTCAGATaGCCAGATGAGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQRRRLR*PDEQCR
Trigger: TCTACATTGCTCATCTGGGCATCTGAGCCTCCTTCG...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAACTTCCTCCTCATCCATaGTGTCAAGAGGACAGTTGT +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQLPPHP*CQEDSC
Trigger: ACAACTGTCCTCTTGACAGCATGGATGAGGAGGAAG...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTCAGACGGGCTGGGCTTaGTGTCTGTTTAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASQTGWA*CLFNCC
Trigger: ACAACAATTAAACAGACAGCAAGCCCAGCCCGTCTG...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCTTCTCAGGGGATTTTTaGAGACGGGCTGGGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIIFSGDF*RRAGLA
Trigger: AGCAAGCCCAGCCCGTCTGCAAAAATCCCCTGAGAA...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTAATTCACAGTCTGCGTaGACGGCTCTCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASNSQSA*TALHSS
Trigger: AGAAGAATGGAGAGCCGTGCACGCAGACTGTGAATT...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCGCAAATTCACAGTCTaGGTGCACGGCTCTCCATTC +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNRKFTV*VHGSPF
Trigger: GAATGGAGAGCCGTGCACGCAGACTGTGAATTTGCG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATGGTATTCCGAGTTTTTaGCGTGTTTCCTGGATGATC +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYGIPSF*RVSWMI
Trigger: GATCATCCAGGAAACACGGCAAAAACTCGGAATACC...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACAATCCGCTGCTTCTGTTaGTTCAAGAGTGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTIRCFC*FKSAEA
Trigger: GGCCTCAGCACTCTTGAAGCAACAGAAGCAGCGGAT...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACAATCTCCAACATCCGCTaGTTCTGTTGCTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITISNIR*FCCFKS
Trigger: ACTCTTGAAGCAACAGAAGCAGCGGATGTTGGAGAT...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGACTTCACTTGAGCTCTaGAGAAATCGCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSTSLEL*RNRFCI
Trigger: AATACAGAAGCGATTTCTGCAGAGCTCAAGTGAAGT...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCGGCCTCTTTCAGGATaGCTGTGTGTTTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCRPLSG*LCVLIL
Trigger: CAAAATCAAAACACACAGGCATCCTGAAAGAGGCCG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCAGTGGTATTCATGCTaGTCACTGACGCAGGTCTCC +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNQWYSC*SLTQVS
Trigger: GGAGACCTGCGTCAGTGAGCAGCATGAATACCACTG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCATGCCAGTGGTATTCATaGTGCTCACTGACGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSCQWYS*CSLTQV
Trigger: GACCTGCGTCAGTGAGCAGCATGAATACCACTGGCA...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCACCACAGTTACTGCAGTaGTTGTTCGGGAGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSPQLLQ*LFGSLS
Trigger: GGACAGACTCCCGAACAAGCACTGCAGTAACTGTGG...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATTTTGGAAAACCAGGTTaGCCAGATGGAAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYFGKPG*PDGRIS
Trigger: GGAGATTCTTCCATCTGGGCAACCTGGTTTTCCAAA...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATATTTTTGCAGACGGGCTaGGCTTGCTGTCTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNIFLQTG*ACCLFN
Trigger: ATTAAACAGACAGCAAGCCCAGCCCGTCTGCAAAAA...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCATCGTCTGTAGGGGTTaGGAGGGTGCACTTGTCATC +
Preference number: 4 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIIIVCRG*EGALVI
Trigger: GATGACAAGTGCACCCTCCCAACCCCTACAGACGAT...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCACTATTCACACTCTGTaGCGTAACCTTCTTCAATAT +
Preference number: 4 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGTIHTL*RNLLQY
Trigger: ATATTGAAGAAGGTTACGCCACAGAGTGTGAATAGT...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATTTTGCCGTGTTTCCTaGATGATCAAGTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLFCRVS*MIKFVP
Trigger: GGGCACAAACTTGATCATCCAGGAAACACGGCAAAA...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAACAAGACAGGCTCTTCTaGGGTATTCCGAGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQQDRLF*GIPSFC
Trigger: GCAAAAACTCGGAATACCCCAGAAGAGCCTGTCTTG...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTACACCATCATGCCAGTaGTATTCATGCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASTPSCQ*YSCCSL
Trigger: CAGTGAGCAGCATGAATACCACTGGCATGATGGTGT...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACATCAAACCAACCCAATaGCAGAAAGTAAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDIKPTQ*QKVSRQ
Trigger: TTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGAT...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCAAGAGGACAGTTGTaGCAGGAAACTTCGAAGGAG +
Preference number: 4 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSESRGQL*QETSKE
Trigger: CTCCTTCGAAGTTTCCTGTCACAACTGTCCTCTTGA...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTCGCAGAAAAGCATGTTaGCTCCTGAATTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASRRKAC*LLNSLN
Trigger: GTTCAGAGAATTCAGGAGTCAACATGCTTTTCTGCG...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATTTCCAGAGCGCTTTGTaGACTTCTCCAAATAAGAAC +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYFQSAL*TSPNKN
Trigger: GTTCTTATTTGGAGAAGTTCACAAAGCGCTCTGGAA...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATATTCCAGAGCGCTTTGTaGACTTCTCCAAATAAGAAC +
Preference number: 4 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNIFQSAL*TSPNKN
Trigger: GTTCTTATTTGGAGAAGTTCACAAAGCGCTCTGGAA...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCTTGCTTCAAGAGTGCTaGGGCCGAGATGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIILLQEC*GRDGLD
Trigger: ATCAAGTCCATCTCGGCCTCAGCACTCTTGAAGCAA...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATTTCCACAGGGACATTTaGAAAACCTCTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYFHRDI*KTSSHH
Trigger: ATGGTGTGAAGAGGTTTTTCAAATGTCCCTGTGGAA...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCGAAGGAGGCTCAGATaGCCAGATGAGCAATGTAGA +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNRRRLR*PDEQCR
Trigger: TCTACATTGCTCATCTGGGCATCTGAGCCTCCTTCG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCCTCTTCACACCATCATaGCAGTGGTATTCATGCTGC +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEILFTPS*QWYSCC
Trigger: GCAGCATGAATACCACTGGCATGATGGTGTGAAGAG...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTTTTGGAAAACCAGGTTaGCCAGATGGAAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASFGKPG*PDGRIS
Trigger: GGAGATTCTTCCATCTGGGCAACCTGGTTTTCCAAA...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp GGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATACAACTTATACACGTGAATACTGACTaGAATGATACCCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: GIQIQLTLSLYKHIIQLIHVNTD*NDTLCS
Trigger: TGAACAGAGGGTATCATTGCAGTCAGTATTCACGTG...TATAAGTTGTATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAGCGGGCAAACTTCTTTaGAATTCGTCCTCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQAGKLL*NSSSRE
Trigger: TTCTCTGGAGGACGAATTCCAAAGAAGTTTGCCCGC...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATTTTGCCGTGTTTCCTaGATGATCAAGTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQFCRVS*MIKFVP
Trigger: GGGCACAAACTTGATCATCCAGGAAACACGGCAAAA...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAGATGGACTTGATGGCTaGTTTTGGGCTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQDGLDG*FWAPHN
Trigger: ATTATGGGGAGCCCAAAACCAGCCATCAAGTCCATC...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAACACCATCATGCCAGTaGTATTCATGCTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQTPSCQ*YSCCSL
Trigger: CAGTGAGCAGCATGAATACCACTGGCATGATGGTGT...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTTCAATCAGGAATCAATaGACAATACACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCSIRNQ*TIHSQS
Trigger: GGATTGGCTGTGTATTGTCCATTGATTCCTGATTGA...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTAATCAAACCAACCCAATaGCAGAAAGTAAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLIKPTQ*QKVSRQ
Trigger: TTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGAT...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAGCTCAGACACCAACCTaGTGTTCAAGTTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQAQTPT*CSSSVV
Trigger: CACAACAGAACTTGAACACCAGGTTGGTGTCTGAGC...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCGCTCTCAACTTCACTTaGGCTCTGCAGAAATCGCTT +
Preference number: 4 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIIALNFT*ALQKSL
Trigger: AAGCGATTTCTGCAGAGCTCAAGTGAAGTTGAGAGC...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTGCTTTTAGGATTTTCTaGAATTCCTCAGATTCCAGA +
Preference number: 4 (lower is better)
Translates to: NPMAESKQAKLMGLTSICAFRIF*NSSDSR
Trigger: TCTGGAATCTGAGGAATTTCAGAAAATCCTAAAAGC...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTGCTACTTACCTGGAGTaGGAATTAAGCCAAATTCTT +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCATYLE*ELSQIL
Trigger: AAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGC...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp GGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATACAACTTATAGAAGAATCTCCTGAATaGAACCTTTGCTGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GIQIQLTLSLYKHIIQLIEESPE*NLCCGN
Trigger: ATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTC...TATAAGTTGTATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAGAAGAATCTCCTGAATaGAACCTTTGCTGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNIEESPE*NLCCGN
Trigger: ATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTC...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATAAAGAGCTCATCAAATaGGTCGGGCTCGCCATTTTC +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNKELIK*VGLAIF
Trigger: GAAAATGGCGAGCCCGACGCATTTGATGAGCTCTTT...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAAAGAGCTCATCAAATaGGTCGGGCTCGCCATTTTC +
Preference number: 4 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKKELIK*VGLAIF
Trigger: GAAAATGGCGAGCCCGACGCATTTGATGAGCTCTTT...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCACAGACGGGCTGGGCTTaGTGTCTGTTTAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSQTGWA*CLFNCC
Trigger: ACAACAATTAAACAGACAGCAAGCCCAGCCCGTCTG...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp GGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATACAACTTATAACTTCACTTGAGCTCTaGAGAAATCGCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: GIQIQLTLSLYKHIIQLITSLEL*RNRFCI
Trigger: AATACAGAAGCGATTTCTGCAGAGCTCAAGTGAAGT...TATAAGTTGTATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTACTTCACTTGAGCTCTaGAGAAATCGCTTCTGTATT +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCTSLEL*RNRFCI
Trigger: AATACAGAAGCGATTTCTGCAGAGCTCAAGTGAAGT...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACAACACAGCCAATCCTTTaGTTTCCAGAGTCACAGGAG +
Preference number: 4 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTTQPIL*FPESQE
Trigger: CTCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGT...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTTTGCTGTGGTAATTTaGATAGGGGTTGACCTTTCA +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCFAVVI*IGVDLS
Trigger: TGAAAGGTCAACCCCTATGCAAATTACCACAGCAAA...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATATATCTCCAAAGAGAGTaGCCAGATTTTCCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LPRWKNLLNETFAVVICIYLQRE*PDFPFR
Trigger: ACGAAAAGGAAAATCTGGCCACTCTCTTTGGAGATA...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCTTTTTGCAGACGGGCTaGGCTTGCTGTCTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIFLQTG*ACCLFN
Trigger: ATTAAACAGACAGCAAGCCCAGCCCGTCTGCAAAAA...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAACAAGACAGGCTCTTCTaGGGTATTCCGAGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKQDRLF*GIPSFC
Trigger: GCAAAAACTCGGAATACCCCAGAAGAGCCTGTCTTG...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGATGGACTTGATGGCTaGTTTTGGGCTCCCCATAAT +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSDGLDG*FWAPHN
Trigger: ATTATGGGGAGCCCAAAACCAGCCATCAAGTCCATC...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATTCAATCAGGAATCAATaGACAATACACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYSIRNQ*TIHSQS
Trigger: GGATTGGCTGTGTATTGTCCATTGATTCCTGATTGA...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAAATCAAACCAACCCAATaGCAGAAAGTAAGCAGGCAA +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQIKPTQ*QKVSRQ
Trigger: TTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGAT...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTGCAAAGTGATTCAGTaGCTTGATCAATTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSCKVIQ*LDQFQR
Trigger: TCTTTGAAATTGATCAAGCCACTGAATCACTTTGCA...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAAATGCAAAAATTAGCTaGGCTTGGTCACGCACGCCT +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSNAKIS*AWSRTP
Trigger: AGGCGTGCGTGACCAAGCCCAGCTAATTTTTGCATT...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGCTCAGACACCAACCTaGTGTTCAAGTTCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSAQTPT*CSSSVV
Trigger: CACAACAGAACTTGAACACCAGGTTGGTGTCTGAGC...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAACGCAGAAAAGCATGTTaGCTCCTGAATTCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKRRKAC*LLNSLN
Trigger: GTTCAGAGAATTCAGGAGTCAACATGCTTTTCTGCG...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACAATCTTTTCCTTGATCTaGGACAGTCTGATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITIFSLI*DSLISF
Trigger: AAAACTGATCAGACTGTCTCAGATCAAGGAAAAGAT...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATATCAGTTTCCATATGCTaGAGGTTTTTCCACTATTCA +
Preference number: 4 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNISVSIC*RFFHYS
Trigger: TGAATAGTGGAAAAACCTTCAGCATATGGAAACTGA...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAAATTCATCCTCAGCTTaGGAAGAAAACATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LPRWKNLLNETFAVVICINSSSA*EENMVF
Trigger: AAACACCATGTTTTCTTCTCAAGCTGAGGATGAATT...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATAATTCATCCTCAGCTTaGGAAGAAAACATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYNSSSA*EENMVF
Trigger: AAACACCATGTTTTCTTCTCAAGCTGAGGATGAATT...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATATTTTCTTCCAGCAGTaGGGTCAGCAGAGACAGATT +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNIFFQQ*GQQRQI
Trigger: AATCTGTCTCTGCTGACCGCACTGCTGGAAGAAAAT...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAATTTTCTTCCAGCAGTaGGGTCAGCAGAGACAGATT +
Preference number: 4 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKIFFQQ*GQQRQI
Trigger: AATCTGTCTCTGCTGACCGCACTGCTGGAAGAAAAT...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACTTCCTTAATTCCTCTTaGAACTCTTCATTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: WKNLLNETFAVVICIGVDFLNSS*NSSFVF
Trigger: GAAAACGAATGAAGAGTTGCAAGAGGAATTAAGGAA...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACAGGTATTCCGAGTTTTTaGCGTGTTTCCTGGATGATC +
Preference number: 4 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTGIPSF*RVSWMI
Trigger: GATCATCCAGGAAACACGGCAAAAACTCGGAATACC...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCATCTCCAACATCCGCTaGTTCTGTTGCTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIIISNIR*FCCFKS
Trigger: ACTCTTGAAGCAACAGAAGCAGCGGATGTTGGAGAT...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR GCA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAACGGCCTCTTTCAGGATaGCTGTGTGTTTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKRPLSG*LCVLIL
Trigger: CAAAATCAAAACACACAGGCATCCTGAAAGAGGCCG...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCGGCCTCTTTCAGGATaGCTGTGTGTTTTGATTTTG +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNRPLSG*LCVLIL
Trigger: CAAAATCAAAACACACAGGCATCCTGAAAGAGGCCG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATTTTTTGCAGACGGGCTaGGCTTGCTGTCTGTTTAAT +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNFLQTG*ACCLFN
Trigger: ATTAAACAGACAGCAAGCCCAGCCCGTCTGCAAAAA...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAATTGAAGATGAGCTTTTaGGATCTGGAGGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKLKMSF*DLEVKP
Trigger: AGGCTTCACCTCCAGATCCCAAAAGCTCATCTTCAA...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATACTGAAGCTGTGGCTTTaGCTAAATGTTGTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: LPRWKNLLNETFAVVICILKLWL*LNVVLS
Trigger: ACTTAAAACAACATTTAGCCAAAGCCACAGCTTCAG...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATACTGAAGCTGTGGCTTTaGCTAAATGTTGTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNILKLWL*LNVVLS
Trigger: ACTTAAAACAACATTTAGCCAAAGCCACAGCTTCAG...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp GGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATACAACTTATAGTTTTTGTAAGAACCTaGCCTTTTGCCCTTAATTTG +
Preference number: 4 (lower is better)
Translates to: GIQIQLTLSLYKHIIQLIVFVRT*PFALNL
Trigger: CAAATTAAGGGCAAAAGGCCAGGTTCTTACAAAAAC...TATAAGTTGTATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATGTTTTTGTAAGAACCTaGCCTTTTGCCCTTAATTTG +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYVFVRT*PFALNL
Trigger: CAAATTAAGGGCAAAAGGCCAGGTTCTTACAAAAAC...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCCACATTATTAGCATaGGTCACTAAAAGGAGTCAA +
Preference number: 4 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCSTLLA*VTKRSQ
Trigger: TTGACTCCTTTTAGTGACCCATGCTAATAATGTGGA...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378694.1
CDS-3UTR TCA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGCTTTTAGGATTTTCTaGAATTCCTCAGATTCCAGA +
Preference number: 4 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASAFRIF*NSSDSR
Trigger: TCTGGAATCTGAGGAATTTCAGAAAATCCTAAAAGC...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACATTCCACAGGGACATTTaGAAAACCTCTTCACACCAT +
Preference number: 4 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTFHRDI*KTSSHH
Trigger: ATGGTGTGAAGAGGTTTTTCAAATGTCCCTGTGGAA...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATTTCCTTAATTCCTCTTaGAACTCTTCATTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYFLNSS*NSSFVF
Trigger: GAAAACGAATGAAGAGTTGCAAGAGGAATTAAGGAA...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAACACGTGAATACTGACTaGAATGATACCCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKHVNTD*NDTLCS
Trigger: TGAACAGAGGGTATCATTGCAGTCAGTATTCACGTG...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATATCTCCAAAGAGAGTaGCCAGATTTTCCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSEYLQRE*PDFPFR
Trigger: ACGAAAAGGAAAATCTGGCCACTCTCTTTGGAGATA...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAAACTATTCACACTCTGTaGCGTAACCTTCTTCAATAT +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQTIHTL*RNLLQY
Trigger: ATATTGAAGAAGGTTACGCCACAGAGTGTGAATAGT...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATTCTCCTCCTATCTTTaGACCAGTCTTTTCCTAGAA +
Preference number: 4 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSEFSSYL*TSLFLE
Trigger: TTCTAGGAAAAGACTGGTCCAAAGATAGGAGGAGAA...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378694.1
CDS-3UTR CCA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACATGCAAAGTGATTCAGTaGCTTGATCAATTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITCKVIQ*LDQFQR
Trigger: TCTTTGAAATTGATCAAGCCACTGAATCACTTTGCA...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCTCAGTTTCCATATGCTaGAGGTTTTTCCACTATTCA +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEISVSIC*RFFHYS
Trigger: TGAATAGTGGAAAAACCTTCAGCATATGGAAACTGA...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCAATTCATCCTCAGCTTaGGAAGAAAACATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEINSSSA*EENMVF
Trigger: AAACACCATGTTTTCTTCTCAAGCTGAGGATGAATT...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATGCTACTTACCTGGAGTaGGAATTAAGCCAAATTCTT +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNATYLE*ELSQIL
Trigger: AAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGC...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR GCA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATTCCTTAATTCCTCTTaGAACTCTTCATTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQFLNSS*NSSFVF
Trigger: GAAAACGAATGAAGAGTTGCAAGAGGAATTAAGGAA...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAAACTATTCACACTCTGTaGCGTAACCTTCTTCAATAT +
Preference number: 4 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSETIHTL*RNLLQY
Trigger: ATATTGAAGAAGGTTACGCCACAGAGTGTGAATAGT...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCTCAATCAGGAATCAATaGACAATACACAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIISIRNQ*TIHSQS
Trigger: GGATTGGCTGTGTATTGTCCATTGATTCCTGATTGA...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CCA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAGGTCAAATGATATTTaGAAAACCAGGTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKRSNDI*KTRLPR
Trigger: TCTGGGCAACCTGGTTTTCCAAATATCATTTGACCT...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR TCA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACAATCTTTTCCTTGATCTaGGACAGTCTGATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTIFSLI*DSLISF
Trigger: AAAACTGATCAGACTGTCTCAGATCAAGGAAAAGAT...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAATCTTTTCCTTGATCTaGGACAGTCTGATCAGTTTT +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSIFSLI*DSLISF
Trigger: AAAACTGATCAGACTGTCTCAGATCAAGGAAAAGAT...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATTCAGTTTCCATATGCTaGAGGTTTTTCCACTATTCA +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNSVSIC*RFFHYS
Trigger: TGAATAGTGGAAAAACCTTCAGCATATGGAAACTGA...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR TCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATGCTTTTAGGATTTTCTaGAATTCCTCAGATTCCAGA +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNAFRIF*NSSDSR
Trigger: TCTGGAATCTGAGGAATTTCAGAAAATCCTAAAAGC...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCTGAAGCTGTGGCTTTaGCTAAATGTTGTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNLKLWL*LNVVLS
Trigger: ACTTAAAACAACATTTAGCCAAAGCCACAGCTTCAG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACAGTTTTTGTAAGAACCTaGCCTTTTGCCCTTAATTTG +
Preference number: 4 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTVFVRT*PFALNL
Trigger: CAAATTAAGGGCAAAAGGCCAGGTTCTTACAAAAAC...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CCA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAAAATTAGTACGCAAATaGCATACCTTTAGCATTCCG +
Preference number: 4 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSKLVRK*HTFSIP
Trigger: CGGAATGCTAAAGGTATGCCATTTGCGTACTAATTT...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000378694.1
CDS GCA 90 bp CCACATGCTGCCGAGTCACAAAAGCACCACACAGGGCCCATGGGTTaGTGCAGCCCCCACCTTCACCCACCGTCTTGCATGTCACGACAC +
Preference number: 5 (lower is better)
Translates to: PHAAESQKHHTGPMG*CSPHLHPPSCMSRH
Trigger: GTGTCGTGACATGCAAGACGGTGGGTGAAGGTGGGGGCTGCAGCAACCCATGGGCCCTGTGTGGTGCTTTTGTGACTCGGCAGCATGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481292.1
CDS TCA 90 bp AACACACCTCCTCTGAACCATCCTTGGGCTTCATGGGGTTGGCATTaGGGATCCCTACGACAGTCCCCTGCTCCGTCTTCCAGAGCGCTT +
Preference number: 5 (lower is better)
Translates to: NTPPLNHPWASWGWH*GSLRQSPAPSSRAL
Trigger: AAGCGCTCTGGAAGACGGAGCAGGGGACTGTCGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGGAGGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CCA 90 bp GCACAGCCGTTCTTTGAGGCTGGTGCCTCTGCGGGCAAACTTCTTTaGAATTCGTCCTCCAGAGAAGGTGGACTGCAGATCCGCACGCTT +
Preference number: 5 (lower is better)
Translates to: AQPFFEAGASAGKLL*NSSSREGGLQIRTL
Trigger: AAGCGTGCGGATCTGCAGTCCACCTTCTCTGGAGGACGAATTCCAAAGAAGTTTGCCCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCCCAGCTTGGGCGTCATaGTGGCCGGGGCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGPAWAS*WPGLPP
Trigger: TGGAGGGAGCCCCGGCCACAATGACGCCCAAGCTGG...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 90 bp TTCGTCCTCCAGAGAAGGTGGACTGCAGATCCGCACGCTTTGCGCTaGGCTTCTTGTACTGAGCCTGGACATGGTACTGACAGTACTCAC +
Preference number: 5 (lower is better)
Translates to: FVLQRRWTADPHALR*ASCTEPGHGTDSTH
Trigger: GTGAGTACTGTCAGTACCATGTCCAGGCTCAGTACAAGAAGCTCAGCGCAAAGCGTGCGGATCTGCAGTCCACCTTCTCTGGAGGACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CCA 90 bp CGGACCCAGTGGTCCAGGGCAAGAGATGTTAGGACCCATCCAAACTaGGGGCTGTGGTCAAATGAGAGAAGAATCCCCTCGACAAACACT +
Preference number: 5 (lower is better)
Translates to: RTQWSRARDVRTHPN*GLWSNERRIPSTNT
Trigger: AGTGTTTGTCGAGGGGATTCTTCTCTCATTTGACCACAGCCCCCAGTTTGGATGGGTCCTAACATCTCTTGCCCTGGACCACTGGGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481292.1
CDS GCA 90 bp TGGAATTCGTCCTCCAGAGAAGGTGGACTGCAGATCCGCACGCTTTaGGCTGAGCTTCTTGTACTGAGCCTGGACATGGTACTGACAGTA +
Preference number: 5 (lower is better)
Translates to: WNSSSREGGLQIRTL*AELLVLSLDMVLTV
Trigger: TACTGTCAGTACCATGTCCAGGCTCAGTACAAGAAGCTCAGCGCAAAGCGTGCGGATCTGCAGTCCACCTTCTCTGGAGGACGAATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 90 bp TGTCAAGAGGACAGTTGTGACAGGAAACTTCGAAGGAGGCTCAGATaGCCAGATGAGCAATGTAGAATCTTGGCCGATGCCGGGACGCCT +
Preference number: 5 (lower is better)
Translates to: CQEDSCDRKLRRRLR*PDEQCRILADAGTP
Trigger: AGGCGTCCCGGCATCGGCCAAGATTCTACATTGCTCATCTGGGCATCTGAGCCTCCTTCGAAGTTTCCTGTCACAACTGTCCTCTTGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378714.8
ENST00000484800.6
CDS CCA 90 bp TTTTGGGATCTGGAGGTGAAGCCTTTGGTGTTCGAGCCACCCTCTTaGTTCTTGGTAGCGCAGGGACATCAAGCTCCGCAGAAAAGCATG +
Preference number: 5 (lower is better)
Translates to: FWDLEVKPLVFEPPS*FLVAQGHQAPQKSM
Trigger: CATGCTTTTCTGCGGAGCTTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAACACCAAAGGCTTCACCTCCAGATCCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTACACCTCGCCCCAGCTaGGGCGTCATTGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCTPRPS*GVIVAG
Trigger: CCCGGCCACAATGACGCCCAAGCTGGGGCGAGGTGT...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS TCA 90 bp AAGAAACCCCTCCGTAGTAAAAGCCATCTTGGCACAGCCGTTCTTTaGGGCTGGTGCCTCTGCGGGCAAACTTCTTTGGAATTCGTCCTC +
Preference number: 5 (lower is better)
Translates to: KKPLRSKSHLGTAVL*GWCLCGQTSLEFVL
Trigger: GAGGACGAATTCCAAAGAAGTTTGCCCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCCAAGATGGCTTTTACTACGGAGGGGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 90 bp GTTTTAAGTTCCTGGCTCCACACGTCGGCAGGTCCATCAGTTCCTTaGACTCCTCAGAGCAAGACAGGCTCTTCTGGGGTATTCCGAGTT +
Preference number: 5 (lower is better)
Translates to: VLSSWLHTSAGPSVP*TPQSKTGSSGVFRV
Trigger: AACTCGGAATACCCCAGAAGAGCCTGTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACCTGCCGACGTGTGGAGCCAGGAACTTAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 90 bp TCTCCTCATCTCCAACATCCGCTGCTTCTGTTGCTTCAAGAGTGCTaGGGCCGAGATGGACTTGATGGCTGGTTTTGGGCTCCCCATAAT +
Preference number: 5 (lower is better)
Translates to: SPHLQHPLLLLLQEC*GRDGLDGWFWAPHN
Trigger: ATTATGGGGAGCCCAAAACCAGCCATCAAGTCCATCTCGGCCTCAGCACTCTTGAAGCAACAGAAGCAGCGGATGTTGGAGATGAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCGTTCGAGCCACCCTCTaGGTTCTTGGTAGCGCAGGG +
Preference number: 5 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGVRATL*VLGSAG
Trigger: CCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAAC...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 90 bp GAAAATCCCCACGTGGGACAAAGAGCTCCAGGTGATTCTCATACCTaGAGTGCTTGTTCGGGAGTCTGTCCAAGGAGATGCTTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: ENPHVGQRAPGDSHT*SACSGVCPRRCFCF
Trigger: GAAACAGAAGCATCTCCTTGGACAGACTCCCGAACAAGCACTGCAGGTATGAGAATCACCTGGAGCTCTTTGTCCCACGTGGGGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485659.1
CDS-3UTR CAA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCCTTCTCAGGGGATTTTaGCAGACGGGCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGLLRGF*QTGWAC
Trigger: GCAAGCCCAGCCCGTCTGCAAAAATCCCCTGAGAAG...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGGTTCGAGCCACCCTCTaGGTTCTTGGTAGCGCAGGG +
Preference number: 5 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSVRATL*VLGSAG
Trigger: CCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAAC...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTTGGCACAGCCGTTCTTaGAGGCTGGTGCCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCWHSRS*RLVPLR
Trigger: CCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCCA...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCGAGCAGGGGGCTGTCTaGATGAAGATGGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGEQGAV*MKMAQL
Trigger: CAGCTGTGCCATCTTCATCAAGACAGCCCCCTGCTC...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 90 bp AGGATCCCTACGACAGTCCCCTGCTCCGTCTTCCAGAGCGCTTTGTaGACTTCTCCAAATAAGAACAAGGACACACATTGTGTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RIPTTVPCSVFQSAL*TSPNKNKDTHCVRS
Trigger: TGACCTGACACAATGTGTGTCCTTGTTCTTATTTGGAGAAGTTCACAAAGCGCTCTGGAAGACGGAGCAGGGGACTGTCGTAGGGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GAGAAAACTGAAGCCCAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAGTTCGAGCCACCCTCTaGGTTCTTGGTAGCGCAGGG +
Preference number: 5 (lower is better)
Translates to: EKTEAQKLSYLPGVRIKPVRATL*VLGSAG
Trigger: CCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAAC...TGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTGGGCTTCAGTTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATATGGCACAGCCGTTCTTaGAGGCTGGTGCCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNIWHSRS*RLVPLR
Trigger: CCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCCA...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAACCAGCTTGGGCGTCATaGTGGCCGGGGCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQPAWAS*WPGLPP
Trigger: TGGAGGGAGCCCCGGCCACAATGACGCCCAAGCTGG...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAACACCTCGCCCCAGCTaGGGCGTCATTGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQTPRPS*GVIVAG
Trigger: CCCGGCCACAATGACGCCCAAGCTGGGGCGAGGTGT...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATAAGGTGGGAGGACTGCTaGAGCCCAGGGAAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIRWEDC*SPGKPR
Trigger: CCTTGGCTTCCCTGGGCTCAAGCAGTCCTCCCACCT...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS GCA 90 bp TGTATAAGATTCACCGTCGCCGTCGGCATCAAAGAGCTCATCAAATaGGTCGGGCTCGCCATTTTCCCGCGTCAAGAAGTTATTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CIRFTVAVGIKELIK*VGLAIFPRQEVIFF
Trigger: GAAGAAAATAACTTCTTGACGCGGGAAAATGGCGAGCCCGACGCATTTGATGAGCTCTTTGATGCCGACGGCGACGGTGAATCTTATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000479669.5
ENST00000484800.6
CDS GCA 90 bp TCTTCTGATTTCCTTCTCCTCATCTCCAACATCCGCTGCTTCTGTTaGTTCAAGAGTGCTGAGGCCGAGATGGACTTGATGGCTGGTTTT +
Preference number: 5 (lower is better)
Translates to: SSDFLLLISNIRCFC*FKSAEAEMDLMAGF
Trigger: AAAACCAGCCATCAAGTCCATCTCGGCCTCAGCACTCTTGAAGCAACAGAAGCAGCGGATGTTGGAGATGAGGAGAAGGAAATCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTGAGGCCGAGATGGACTaGATGGCTGGTTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCEAEMD*MAGFGL
Trigger: GAGCCCAAAACCAGCCATCAAGTCCATCTCGGCCTC...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTGAGCAGGGGGCTGTCTaGATGAAGATGGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCEQGAV*MKMAQL
Trigger: CAGCTGTGCCATCTTCATCAAGACAGCCCCCTGCTC...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAACCAGCTTGGGCGTCATaGTGGCCGGGGCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKPAWAS*WPGLPP
Trigger: TGGAGGGAGCCCCGGCCACAATGACGCCCAAGCTGG...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACAACACCTCGCCCCAGCTaGGGCGTCATTGTGGCCGGG +
Preference number: 5 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTTPRPS*GVIVAG
Trigger: CCCGGCCACAATGACGCCCAAGCTGGGGCGAGGTGT...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CCA 90 bp CTAGTTATCCCACTAGGTTTGTTCCGAGAAATCGTCTGTAGGGGTTaGGAGGGTGCACTTGTCATCCTTGAAGATGAGCTTTTGGGATCT +
Preference number: 5 (lower is better)
Translates to: LVIPLGLFREIVCRG*EGALVILEDELLGS
Trigger: AGATCCCAAAAGCTCATCTTCAAGGATGACAAGTGCACCCTCCCAACCCCTACAGACGATTTCTCGGAACAAACCTAGTGGGATAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTCCACCCTCTTGGTTCTaGGTAGCGCAGGGACATCAA +
Preference number: 5 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCPPSWF*VAQGHQ
Trigger: TTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGG...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACACTGGAGGTGAAGCCTTaGGTGTTCGAGCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITLEVKP*VFEPPS
Trigger: AGAGGGTGGCTCGAACACCAAAGGCTTCACCTCCAG...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATGAGGCCGAGATGGACTaGATGGCTGGTTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYEAEMD*MAGFGL
Trigger: GAGCCCAAAACCAGCCATCAAGTCCATCTCGGCCTC...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACAGAGCAGGGGGCTGTCTaGATGAAGATGGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITEQGAV*MKMAQL
Trigger: CAGCTGTGCCATCTTCATCAAGACAGCCCCCTGCTC...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATCTTCTCAGGGGATTTTaGCAGACGGGCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYLLRGF*QTGWAC
Trigger: GCAAGCCCAGCCCGTCTGCAAAAATCCCCTGAGAAG...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATATTGGGCTTCATGGGGTaGGCATTGAGGATCCCTACG +
Preference number: 5 (lower is better)
Translates to: GLNKHLFLTASIRNQWTILGFMG*ALRIPT
Trigger: CGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAA...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAATGGCACAGCCGTTCTTaGAGGCTGGTGCCTCTGCGG +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKWHSRS*RLVPLR
Trigger: CCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCCA...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATCCACAGCTGCTGCAATaGAAGCTGCATACGAGGCAG +
Preference number: 5 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYPQLLQ*KLHTRQ
Trigger: CTGCCTCGTATGCAGCTTCAATTGCAGCAGCTGTGG...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAAGGTGGGAGGACTGCTaGAGCCCAGGGAAGCCAAGG +
Preference number: 5 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKRWEDC*SPGKPR
Trigger: CCTTGGCTTCCCTGGGCTCAAGCAGTCCTCCCACCT...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAACTCTACAGGGGATTTTaGCAGACGGGCTGGGCTTGC +
Preference number: 5 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQLYRGF*QTGWAC
Trigger: GCAAGCCCAGCCCGTCTGCAAAAATCCCCTGTAGAG...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484800.6
CDS-3UTR CAA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGGGACCCTATTTTCAGTaGACTGTGATGCGGGAACTT +
Preference number: 5 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSGPYFQ*TVMREL
Trigger: AAGTTCCCGCATCACAGTCAACTGAAAATAGGGTCC...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTTTCCACACAGATGGGTaGAGTCGTTTCCCCAGAACT +
Preference number: 5 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCFHTDG*SRFPRT
Trigger: AGTTCTGGGGAAACGACTCAACCCATCTGTGTGGAA...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTTCCACACAGATGGGTaGAGTCGTTTCCCCAGAACT +
Preference number: 5 (lower is better)
Translates to: NPMAESKQAKLMGLTSICFHTDG*SRFPRT
Trigger: AGTTCTGGGGAAACGACTCAACCCATCTGTGTGGAA...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGGACAATATTCATGGGGTTGGCATaGAGGATCCCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: GLNKHLFLTASIRNQWTIFMGLA*RIPTTV
Trigger: GACTGTCGTAGGGATCCTCAATGCCAACCCCATGAA...TATTGTCCATTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTCTCCATTCTTCTTCTaGGCTTTACAGGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSSPFFF*ALQVPR
Trigger: CCTGGGAACCTGTAAAGCCAAGAAGAAGAATGGAGA...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTTGCGGGCAAACTTCTTaGGAATTCGTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCCGQTS*EFVLQR
Trigger: TCTCTGGAGGACGAATTCCAAAGAAGTTTGCCCGCA...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGGGGTATTCCGAGTTTTaGCCGTGTTTCCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: SYLPGVRIKPNSFASGCSGYSEF*PCFLDD
Trigger: ATCATCCAGGAAACACGGCAAAAACTCGGAATACCC...CGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACAGGTCCATCAGTTCCTaGAACTCCTCAGAGCAAGAC +
Preference number: 5 (lower is better)
Translates to: WKNLLNETFAVVICIGVDRSISS*NSSEQD
Trigger: GTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACCT...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAAGAGGCCGAGATGGACTaGATGGCTGGTTTTGGGCTC +
Preference number: 5 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSEEAEMD*MAGFGL
Trigger: GAGCCCAAAACCAGCCATCAAGTCCATCTCGGCCTC...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACAGTCAGCAGAGACAGATaGTCTTCCTCCTCATCCATG +
Preference number: 5 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITVSRDR*SSSSSM
Trigger: CATGGATGAGGAGGAAGACAATCTGTCTCTGCTGAC...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGGTTGACGGACCCTATTTTCAGTaGACTGTGATGCGGGAACTT +
Preference number: 5 (lower is better)
Translates to: WKNLLNETFAVVICIGVDGPYFQ*TVMREL
Trigger: AAGTTCCCGCATCACAGTCAACTGAAAATAGGGTCC...GTCAACCCCTATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAACTGGAGGTGAAGCCTTaGGTGTTCGAGCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKLEVKP*VFEPPS
Trigger: AGAGGGTGGCTCGAACACCAAAGGCTTCACCTCCAG...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCACTGGAGGTGAAGCCTTaGGTGTTCGAGCCACCCTCT +
Preference number: 5 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSLEVKP*VFEPPS
Trigger: AGAGGGTGGCTCGAACACCAAAGGCTTCACCTCCAG...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTGGGGTCCCCACAATTaGACCTCTAGTTATCCCACT +
Preference number: 5 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCWGPHN*TSSYPT
Trigger: AGTGGGATAACTAGAGGTCAAATTGTGGGGACCCCA...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATTCATGGGGTTGGCATaGAGGATCCCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQFMGLA*RIPTTV
Trigger: GACTGTCGTAGGGATCCTCAATGCCAACCCCATGAA...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTTCTCCATTCTTCTTCTaGGCTTTACAGGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: NPMAESKQAKLMGLTSICSPFFF*ALQVPR
Trigger: CCTGGGAACCTGTAAAGCCAAGAAGAAGAATGGAGA...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCCCACAGCTGCTGCAATaGAAGCTGCATACGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIPQLLQ*KLHTRQ
Trigger: CTGCCTCGTATGCAGCTTCAATTGCAGCAGCTGTGG...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATAGGTCCATCAGTTCCTaGAACTCCTCAGAGCAAGAC +
Preference number: 5 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYRSISS*NSSEQD
Trigger: GTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACCT...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTAGGCTCTCAACTTCACTaGAGCTCTGCAGAAATCGCT +
Preference number: 5 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLGSQLH*SSAEIA
Trigger: AGCGATTTCTGCAGAGCTCAAGTGAAGTTGAGAGCC...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAACAGTTACTGCAGTGCTaGTTCGGGAGTCTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQQLLQC*FGSLSK
Trigger: CTTGGACAGACTCCCGAACAAGCACTGCAGTAACTG...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GAGAAAACTGAAGCCCAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCATACACAGCCAATCCTTaGCTTTCCAGAGTCACAGGA +
Preference number: 5 (lower is better)
Translates to: EKTEAQKLSYLPGVRIKPYTANP*LSRVTG
Trigger: TCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGTA...TGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTGGGCTTCAGTTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCCCATAAGAAAGGGATaGCTCAGACACCAACCTGGT +
Preference number: 5 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCPIRKG*LRHQPG
Trigger: ACCAGGTTGGTGTCTGAGCAATCCCTTTCTTATGGG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS TCA 90 bp ATGATCAAGTTTGTGCCCTTAACAACCAGATTACTCAGAGTGGTTTaGATCTTCTTCTTAGGAGCCACAGCTGCTGCAATTGAAGCTGCA +
Preference number: 5 (lower is better)
Translates to: MIKFVPLTTRLLRVV*IFFLGATAAAIEAA
Trigger: TGCAGCTTCAATTGCAGCAGCTGTGGCTCCTAAGAAGAAGATTCAAACCACTCTGAGTAATCTGGTTGTTAAGGGCACAAACTTGATCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CCA 90 bp AATGCAAACTCAAGTGCTAAAGAGAAGAGATGCCAGTTACCTTTTTaGCTTCTGCTAAAGCACTCAGTTTTGGTCTTGGTGGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: NANSSAKEKRCQLPF*LLLKHSVLVLVVVT
Trigger: AGTCACCACCACCAAGACCAAAACTGAGTGCTTTAGCAGAAGCCAAAAAGGTAACTGGCATCTCTTCTCTTTAGCACTTGAGTTTGCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459751.1
CDS-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCACCACCCTCTTGGTTCTaGGTAGCGCAGGGACATCAA +
Preference number: 5 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSPPSWF*VAQGHQ
Trigger: TTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGG...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCCACCCTCTTGGTTCTaGGTAGCGCAGGGACATCAA +
Preference number: 5 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNPPSWF*VAQGHQ
Trigger: TTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTTGGGGTCCCCACAATTaGACCTCTAGTTATCCCACT +
Preference number: 5 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASWGPHN*TSSYPT
Trigger: AGTGGGATAACTAGAGGTCAAATTGTGGGGACCCCA...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTCGTATGAACAAGGACACACATaGTGTCAGGTCACGAAGATC +
Preference number: 5 (lower is better)
Translates to: YLPGVRIKPNSFASGCSYEQGHT*CQVTKI
Trigger: GATCTTCGTGACCTGACACAATGTGTGTCCTTGTTC...ATACGAACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCTTGGGCTTCATGGGGTaGGCATTGAGGATCCCTACG +
Preference number: 5 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIILGFMG*ALRIPT
Trigger: CGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAA...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAATTGGGCTTCATGGGGTaGGCATTGAGGATCCCTACG +
Preference number: 5 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKLGFMG*ALRIPT
Trigger: CGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAA...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GTTAAATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATCTCCATTCTTCTTCTaGGCTTTACAGGTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VKCGIKPTQWQKVSRQSLSPFFF*ALQVPR
Trigger: CCTGGGAACCTGTAAAGCCAAGAAGAAGAATGGAGA...TAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACATTTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATGCGGGCAAACTTCTTaGGAATTCGTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQCGQTS*EFVLQR
Trigger: TCTCTGGAGGACGAATTCCAAAGAAGTTTGCCCGCA...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp CAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATAATAACAGTAGTAAAAGCCATCTaGGCACAGCCGTTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: QPSPTTTSQKCYVPNIITVVKAI*AQPFFE
Trigger: CTCAAAGAACGGCTGTGCCAAGATGGCTTTTACTAC...TGTTATTATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCACCACAGCTGCTGCAATaGAAGCTGCATACGAGGCAG +
Preference number: 5 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSPQLLQ*KLHTRQ
Trigger: CTGCCTCGTATGCAGCTTCAATTGCAGCAGCTGTGG...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGTATTCCGAGTTTTaGCCGTGTTTCCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: LPRWKNLLNETFAVVICIGYSEF*PCFLDD
Trigger: ATCATCCAGGAAACACGGCAAAAACTCGGAATACCC...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp CTAAATCAACCATCTCCCACAACAACCTCCCAAAAGTGTTATGTCCCTAACATACACTCAGTTTTGGTCTaGGTGGTGGTGACTCATCAT +
Preference number: 5 (lower is better)
Translates to: LNQPSPTTTSQKCYVPNIHSVLV*VVVTHH
Trigger: ATGATGAGTCACCACCACCAAGACCAAAACTGAGTG...TATGTTAGGGACATAACACTTTTGGGAGGTTGTTGTGGGAGATGGTTGATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCTAAAGCACTCAGTTTaGGTCTTGGTGGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCLKHSV*VLVVVT
Trigger: AGTCACCACCACCAAGACCAAAACTGAGTGCTTTAG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ATGTGGTATCAAACCAACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCCAATTCATCCTCAGCTaGAGAAGAAAACATGGTGTT +
Preference number: 5 (lower is better)
Translates to: MWYQTNPMAESKQAKLMGQFILS*RRKHGV
Trigger: AACACCATGTTTTCTTCTCAAGCTGAGGATGAATTG...GCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTTGGTTTGATACCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAACAGTTACTGCAGTGCTaGTTCGGGAGTCTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSEQLLQC*FGSLSK
Trigger: CTTGGACAGACTCCCGAACAAGCACTGCAGTAACTG...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATACCGCAGAAAAGCATGTaGACTCCTGAATTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LPRWKNLLNETFAVVICIPQKSM*TPEFSE
Trigger: TTCAGAGAATTCAGGAGTCAACATGCTTTTCTGCGG...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAGTTGGGAGGGTGCACTaGTCATCCTTGAAGATGAGC +
Preference number: 5 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKVGRVH*SSLKMS
Trigger: GCTCATCTTCAAGGATGACAAGTGCACCCTCCCAAC...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTGAATGAAGAAATCTGGCTTTTAATGTCCGTACATCAAGACTATGTGATCATCGTTGGGAGGGTGCACTaGTCATCCTTGAAGATGAGC +
Preference number: 5 (lower is better)
Translates to: LNEEIWLLMSVHQDYVIIVGRVH*SSLKMS
Trigger: GCTCATCTTCAAGGATGACAAGTGCACCCTCCCAAC...GATGATCACATAGTCTTGATGTACGGACATTAAAAGCCAGATTTCTTCATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATGAACAAGGACACACATaGTGTCAGGTCACGAAGATC +
Preference number: 5 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYEQGHT*CQVTKI
Trigger: GATCTTCGTGACCTGACACAATGTGTGTCCTTGTTC...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAAGAACAAGGACACACATaGTGTCAGGTCACGAAGATC +
Preference number: 5 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQEQGHT*CQVTKI
Trigger: GATCTTCGTGACCTGACACAATGTGTGTCCTTGTTC...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAATTCATGGGGTTGGCATaGAGGATCCCTACGACAGTC +
Preference number: 5 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKFMGLA*RIPTTV
Trigger: GACTGTCGTAGGGATCCTCAATGCCAACCCCATGAA...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp CAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGTAGTAAAAGCCATCTaGGCACAGCCGTTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: QKLSYLPGVRIKPNSFASVVKAI*AQPFFE
Trigger: CTCAAAGAACGGCTGTGCCAAGATGGCTTTTACTAC...AGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCGGCTCTCAACTTCACTaGAGCTCTGCAGAAATCGCT +
Preference number: 5 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEIGSQLH*SSAEIA
Trigger: AGCGATTTCTGCAGAGCTCAAGTGAAGTTGAGAGCC...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATCACTCAGTTTTGGTCTaGGTGGTGGTGACTCATCAT +
Preference number: 5 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYHSVLV*VVVTHH
Trigger: ATGATGAGTCACCACCACCAAGACCAAAACTGAGTG...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp GAGAAAACTGAAGCCCAGAAGTTAAGCTACTTACCTGGAGTGAGAATTAAGCCAATAGCAGCTAACTTTTaGGCTTCTGCTAAAGCACTC +
Preference number: 5 (lower is better)
Translates to: EKTEAQKLSYLPGVRIKPIAANF*ASAKAL
Trigger: GAGTGCTTTAGCAGAAGCCAAAAAGTTAGCTGCTAT...TGGCTTAATTCTCACTCCAGGTAAGTAGCTTAACTTCTGGGCTTCAGTTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTGTCCTGAGGGTCCTTTaGTTTCTTCTTAATGCTGTT +
Preference number: 5 (lower is better)
Translates to: NPMAESKQAKLMGLTSICVLRVL*FLLNAV
Trigger: AACAGCATTAAGAAGAAACAAAAGGACCCTCAGGAC...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACACAGTTACTGCAGTGCTaGTTCGGGAGTCTGTCCAAG +
Preference number: 5 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTQLLQC*FGSLSK
Trigger: CTTGGACAGACTCCCGAACAAGCACTGCAGTAACTG...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCATGTTCTTCTCCTCTaGGTAACAGAGTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCHVLLL*VTEFLL
Trigger: GAGGAGAAACTCTGTTACCAAGAGGAGAAGAACATG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATAGGGCTTAACAAGCATTaGTTTTTGACGGCGTCAATC +
Preference number: 5 (lower is better)
Translates to: LPRWKNLLNETFAVVICIGLNKH*FLTASI
Trigger: GATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAGTCAGCAGAGACAGATaGTCTTCCTCCTCATCCATG +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKVSRDR*SSSSSM
Trigger: CATGGATGAGGAGGAAGACAATCTGTCTCTGCTGAC...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTCAGCAGAGACAGATaGTCTTCCTCCTCATCCATG +
Preference number: 5 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSVSRDR*SSSSSM
Trigger: CATGGATGAGGAGGAAGACAATCTGTCTCTGCTGAC...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATGTTATCCCACTAGGTTaGTTCCGAGAAATCGTCTGT +
Preference number: 5 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYVIPLG*FREIVC
Trigger: ACAGACGATTTCTCGGAACAAACCTAGTGGGATAAC...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCATGGGGTCCCCACAATTaGACCTCTAGTTATCCCACT +
Preference number: 5 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSWGPHN*TSSYPT
Trigger: AGTGGGATAACTAGAGGTCAAATTGTGGGGACCCCA...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCATTCCACACAGATGGGTaGAGTCGTTTCCCCAGAACT +
Preference number: 5 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSFHTDG*SRFPRT
Trigger: AGTTCTGGGGAAACGACTCAACCCATCTGTGTGGAA...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAATGCGGGCAAACTTCTTaGGAATTCGTCCTCCAGAGA +
Preference number: 5 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKCGQTS*EFVLQR
Trigger: TCTCTGGAGGACGAATTCCAAAGAAGTTTGCCCGCA...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GACACCAACCTGGTGTTCAAGTTCTGTTGTGACCTATTTCATACACATAGCTGTATTACTCAGAGTGGTTaGAATCTTCTTCTTAGGAGC +
Preference number: 5 (lower is better)
Translates to: DTNLVFKFCCDLFHTHSCITQSG*NLLLRS
Trigger: GCTCCTAAGAAGAAGATTCAAACCACTCTGAGTAAT...ACAGCTATGTGTATGAAATAGGTCACAACAGAACTTGAACACCAGGTTGGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAAGGTCCATCAGTTCCTaGAACTCCTCAGAGCAAGAC +
Preference number: 5 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSRSISS*NSSEQD
Trigger: GTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACCT...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAGGCTCTCAACTTCACTaGAGCTCTGCAGAAATCGCT +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKGSQLH*SSAEIA
Trigger: AGCGATTTCTGCAGAGCTCAAGTGAAGTTGAGAGCC...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAACTAAAGCACTCAGTTTaGGTCTTGGTGGTGGTGACT +
Preference number: 5 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSELKHSV*VLVVVT
Trigger: AGTCACCACCACCAAGACCAAAACTGAGTGCTTTAG...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTCCTTTTGCCCTTAATTaGGTGATAGCAGCTAACTTT +
Preference number: 5 (lower is better)
Translates to: NPMAESKQAKLMGLTSICPFALN*VIAANF
Trigger: AAAGTTAGCTGCTATCACCAAATTAAGGGCAAAAGG...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTTTTCCACAGGGACATTaGAAAAACCTCTTCACACCA +
Preference number: 5 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCFPQGH*KNLFTP
Trigger: TGGTGTGAAGAGGTTTTTCAAATGTCCCTGTGGAAA...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCCAATGGCAGAAAGTAAGCAGGCAAAGCTTATGGGCTTAACAAGCATTTGTAACAAGCATTTGTTTTaGACGGCGTCAATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: NPMAESKQAKLMGLTSICNKHLF*TASIRN
Trigger: ATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTT...ACAAATGCTTGTTAAGCCCATAAGCTTTGCCTGCTTACTTTCTGCCATTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAACCCATAAGAAAGGGATaGCTCAGACACCAACCTGGT +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKPIRKG*LRHQPG
Trigger: ACCAGGTTGGTGTCTGAGCAATCCCTTTCTTATGGG...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACAGTAGTAAAAGCCATCTaGGCACAGCCGTTCTTTGAG +
Preference number: 5 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTVVKAI*AQPFFE
Trigger: CTCAAAGAACGGCTGTGCCAAGATGGCTTTTACTAC...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAGGGTATTCCGAGTTTTaGCCGTGTTTCCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKGYSEF*PCFLDD
Trigger: ATCATCCAGGAAACACGGCAAAAACTCGGAATACCC...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACACACTCAGTTTTGGTCTaGGTGGTGGTGACTCATCAT +
Preference number: 5 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTHSVLV*VVVTHH
Trigger: ATGATGAGTCACCACCACCAAGACCAAAACTGAGTG...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ATTGTAAAAAGGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATATAGCAGCTAACTTTTaGGCTTCTGCTAAAGCACTC +
Preference number: 5 (lower is better)
Translates to: IVKRHPDTAHPQPLQAYYIAANF*ASAKAL
Trigger: GAGTGCTTTAGCAGAAGCCAAAAAGTTAGCTGCTAT...ATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCCTTTTTACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TTGCCCAGATGGAAGAATCTCCTGAATGAAACCTTTGCTGTGGTAATTTGCATACCTTTTGCCCTTAATTaGGTGATAGCAGCTAACTTT +
Preference number: 5 (lower is better)
Translates to: LPRWKNLLNETFAVVICIPFALN*VIAANF
Trigger: AAAGTTAGCTGCTATCACCAAATTAAGGGCAAAAGG...TATGCAAATTACCACAGCAAAGGTTTCATTCAGGAGATTCTTCCATCTGGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAAGTCCTGAGGGTCCTTTaGTTTCTTCTTAATGCTGTT +
Preference number: 5 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQVLRVL*FLLNAV
Trigger: AACAGCATTAAGAAGAAACAAAAGGACCCTCAGGAC...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp GGCATCCAGATACAGCTCACCCTCAGCCTTTACAAGCATATTATACAACTTATACAATTCATCCTCAGCTaGAGAAGAAAACATGGTGTT +
Preference number: 5 (lower is better)
Translates to: GIQIQLTLSLYKHIIQLIQFILS*RRKHGV
Trigger: AACACCATGTTTTCTTCTCAAGCTGAGGATGAATTG...TATAAGTTGTATAATATGCTTGTAAAGGCTGAGGGTGAGCTGTATCTGGATGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp TTAAGCTACTTACCTGGAGTGAGAATTAAGCCAAATTCTTTTGCCTCTGGGTGTCAATTCATCCTCAGCTaGAGAAGAAAACATGGTGTT +
Preference number: 5 (lower is better)
Translates to: LSYLPGVRIKPNSFASGCQFILS*RRKHGV
Trigger: AACACCATGTTTTCTTCTCAAGCTGAGGATGAATTG...ACACCCAGAGGCAAAAGAATTTGGCTTAATTCTCACTCCAGGTAAGTAGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAATTTCCACAGGGACATTaGAAAAACCTCTTCACACCA +
Preference number: 5 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQFPQGH*KNLFTP
Trigger: TGGTGTGAAGAGGTTTTTCAAATGTCCCTGTGGAAA...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAATACACAGCCAATCCTTaGCTTTCCAGAGTCACAGGA +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKYTANP*LSRVTG
Trigger: TCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGTA...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATTACACAGCCAATCCTTaGCTTTCCAGAGTCACAGGA +
Preference number: 5 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNYTANP*LSRVTG
Trigger: TCCTGTGACTCTGGAAAGCAAAGGATTGGCTGTGTA...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCACCGCAGAAAAGCATGTaGACTCCTGAATTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: RYRNIALCLPSNFWAKTSPQKSM*TPEFSE
Trigger: TTCAGAGAATTCAGGAGTCAACATGCTTTTCTGCGG...TGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAACTTCAGTGAATGAAGTAATGCAATCATCCACACTGAGCTTAGAAAAGACACCGCAGAAAAGCATGTaGACTCCTGAATTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: KTSVNEVMQSSTLSLEKTPQKSM*TPEFSE
Trigger: TTCAGAGAATTCAGGAGTCAACATGCTTTTCTGCGG...TGTCTTTTCTAAGCTCAGTGTGGATGATTGCATTACTTCATTCACTGAAGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAGTTATCCCACTAGGTTaGTTCCGAGAAATCGTCTGT +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKVIPLG*FREIVC
Trigger: ACAGACGATTTCTCGGAACAAACCTAGTGGGATAAC...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATGTTATCCCACTAGGTTaGTTCCGAGAAATCGTCTGT +
Preference number: 5 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNVIPLG*FREIVC
Trigger: ACAGACGATTTCTCGGAACAAACCTAGTGGGATAAC...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp CAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAAATAGCAGCTAACTTTTaGGCTTCTGCTAAAGCACTC +
Preference number: 5 (lower is better)
Translates to: QKHSSLFTFQFLGKNFSEIAANF*ASAKAL
Trigger: GAGTGCTTTAGCAGAAGCCAAAAAGTTAGCTGCTAT...TTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAACATGTTCTTCTCCTCTaGGTAACAGAGTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: TKRYRNIALCLPSNFWAKHVLLL*VTEFLL
Trigger: GAGGAGAAACTCTGTTACCAAGAGGAGAAGAACATG...TTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAACATGTTCTTCTCCTCTaGGTAACAGAGTTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKHVLLL*VTEFLL
Trigger: GAGGAGAAACTCTGTTACCAAGAGGAGAAGAACATG...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AAAGCTTATGGGCTTAACAAGCATTTGTTTTTGACGGCGTCAATCAGGAATCAAAACAAGCATTTGTTTTaGACGGCGTCAATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: KAYGLNKHLFLTASIRNQNKHLF*TASIRN
Trigger: ATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTT...TTGATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCCATAAGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAGGGCTTAACAAGCATTaGTTTTTGACGGCGTCAATC +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKGLNKH*FLTASI
Trigger: GATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATGGGCTTAACAAGCATTaGTTTTTGACGGCGTCAATC +
Preference number: 5 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNGLNKH*FLTASI
Trigger: GATTGACGCCGTCAAAAACAAATGCTTGTTAAGCCC...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp TTATTTCTAGCTTTTGAAAACCTAAATCAACCATCTCCCACAACAACCTCCCAAATTACTCAGAGTGGTTaGAATCTTCTTCTTAGGAGC +
Preference number: 5 (lower is better)
Translates to: LFLAFENLNQPSPTTTSQITQSG*NLLLRS
Trigger: GCTCCTAAGAAGAAGATTCAAACCACTCTGAGTAAT...TTGGGAGGTTGTTGTGGGAGATGGTTGATTTAGGTTTTCAAAAGCTAGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATGTCCTGAGGGTCCTTTaGTTTCTTCTTAATGCTGTT +
Preference number: 5 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNVLRVL*FLLNAV
Trigger: AACAGCATTAAGAAGAAACAAAAGGACCCTCAGGAC...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp ACACAAGTTAGATACAGCACCTTCCACCCAATTAGAGCAGAATTTTATGAAATCAACAAGCATTTGTTTTaGACGGCGTCAATCAGGAAT +
Preference number: 5 (lower is better)
Translates to: TQVRYSTFHPIRAEFYEINKHLF*TASIRN
Trigger: ATTCCTGATTGACGCCGTCAAAAACAAATGCTTGTT...GATTTCATAAAATTCTGCTCTAATTGGGTGGAAGGTGCTGTATCTAACTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378694.1
ENST00000378714.8
CDS-3UTR CAA 90 bp AACCAAAAGATACAGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAATTACTCAGAGTGGTTaGAATCTTCTTCTTAGGAGC +
Preference number: 5 (lower is better)
Translates to: NQKIQKHSSLFTFQFLGKITQSG*NLLLRS
Trigger: GCTCCTAAGAAGAAGATTCAAACCACTCTGAGTAAT...TTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCTGTATCTTTTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS-3UTR CAA 90 bp AGAAACATAGCTCTCTGTTTACCTTCCAATTTTTGGGCAAAAACTTCAGTGAATCCTTTTGCCCTTAATTaGGTGATAGCAGCTAACTTT +
Preference number: 5 (lower is better)
Translates to: RNIALCLPSNFWAKTSVNPFALN*VIAANF
Trigger: AAAGTTAGCTGCTATCACCAAATTAAGGGCAAAAGG...ATTCACTGAAGTTTTTGCCCAAAAATTGGAAGGTAAACAGAGAGCTATGTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CCA 72 bp GCTTGGGCGTCATTGTGGCCGGGGCTCCCTCCAGCCTaGGGAACTCGGATCCTGTCCGTGGAGGCTGAGCAG +
Preference number: 6 (lower is better)
Translates to: AWASLWPGLPPA*GTRILSVEAEQ
Trigger: CTGCTCAGCCTCCACGGACAGGATCCGAGTTCCCCAGGCTGGAGGGAGCCCCGGCCACAATGACGCCCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000459751.1
ENST00000481292.1
ENST00000484800.6
CDS CCA 72 bp GAACATCATCTCCTTCCAAGACACCTCGCCCCAGCTTaGGCGTCATTGTGGCCGGGGCTCCCTCCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: EHHLLPRHLAPA*ASLWPGLPPAW
Trigger: CCAGGCTGGAGGGAGCCCCGGCCACAATGACGCCCAAGCTGGGGCGAGGTGTCTTGGAAGGAGATGATGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000459751.1
ENST00000481292.1
ENST00000484800.6
CDS GCA 72 bp GCCGAGTCACAAAAGCACCACACAGGGCCCATGGGTTaGTGCAGCCCCCACCTTCACCCACCGTCTTGCATG +
Preference number: 6 (lower is better)
Translates to: AESQKHHTGPMG*CSPHLHPPSCM
Trigger: CATGCAAGACGGTGGGTGAAGGTGGGGGCTGCAGCAACCCATGGGCCCTGTGTGGTGCTTTTGTGACTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481292.1
CDS CAA 72 bp AGAACATCATCTCCTTCCAAGACACCTCGCCCCAGCTaGGGCGTCATTGTGGCCGGGGCTCCCTCCAGCCTG +
Preference number: 6 (lower is better)
Translates to: RTSSPSKTPRPS*GVIVAGAPSSL
Trigger: CAGGCTGGAGGGAGCCCCGGCCACAATGACGCCCAAGCTGGGGCGAGGTGTCTTGGAAGGAGATGATGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000459751.1
ENST00000481292.1
ENST00000484800.6
CDS CAA 72 bp TGCCGAGTCACAAAAGCACCACACAGGGCCCATGGGTaGCTGCAGCCCCCACCTTCACCCACCGTCTTGCAT +
Preference number: 6 (lower is better)
Translates to: CRVTKAPHRAHG*LQPPPSPTVLH
Trigger: ATGCAAGACGGTGGGTGAAGGTGGGGGCTGCAGCAACCCATGGGCCCTGTGTGGTGCTTTTGTGACTCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481292.1
CDS CAA 90 bp TGGGGAACTCGGATCCTGTCCGTGGAGGCTGAGCAGGGGGCTGTCTaGATGAAGATGGCACAGCTGGGCTCTCAACTTCACTTGAGCTCT +
Preference number: 6 (lower is better)
Translates to: WGTRILSVEAEQGAV*MKMAQLGSQLHLSS
Trigger: AGAGCTCAAGTGAAGTTGAGAGCCCAGCTGTGCCATCTTCATCAAGACAGCCCCCTGCTCAGCCTCCACGGACAGGATCCGAGTTCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000459751.1
ENST00000484800.6
CDS TCA 72 bp CCTCTGAACCATCCTTGGGCTTCATGGGGTTGGCATTaGGGATCCCTACGACAGTCCCCTGCTCCGTCTTCC +
Preference number: 6 (lower is better)
Translates to: PLNHPWASWGWH*GSLRQSPAPSS
Trigger: GGAAGACGGAGCAGGGGACTGTCGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CCA 72 bp CTGGAGGTGAAGCCTTTGGTGTTCGAGCCACCCTCTTaGTTCTTGGTAGCGCAGGGACATCAAGCTCCGCAG +
Preference number: 6 (lower is better)
Translates to: LEVKPLVFEPPS*FLVAQGHQAPQ
Trigger: CTGCGGAGCTTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAACACCAAAGGCTTCACCTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 72 bp CACACCTCCTCTGAACCATCCTTGGGCTTCATGGGGTaGGCATTGAGGATCCCTACGACAGTCCCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: HTSSEPSLGFMG*ALRIPTTVPCS
Trigger: GGAGCAGGGGACTGTCGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGGAGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 90 bp AAACACACCTCCTCTGAACCATCCTTGGGCTTCATGGGGTTGGCATaGAGGATCCCTACGACAGTCCCCTGCTCCGTCTTCCAGAGCGCT +
Preference number: 6 (lower is better)
Translates to: KHTSSEPSLGFMGLA*RIPTTVPCSVFQSA
Trigger: AGCGCTCTGGAAGACGGAGCAGGGGACTGTCGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGGAGGTGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 72 bp TCCTGGCTCCACACGTCGGCAGGTCCATCAGTTCCTTaGACTCCTCAGAGCAAGACAGGCTCTTCTGGGGTA +
Preference number: 6 (lower is better)
Translates to: SWLHTSAGPSVP*TPQSKTGSSGV
Trigger: TACCCCAGAAGAGCCTGTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACCTGCCGACGTGTGGAGCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 72 bp TCTGGAGGTGAAGCCTTTGGTGTTCGAGCCACCCTCTaGGTTCTTGGTAGCGCAGGGACATCAAGCTCCGCA +
Preference number: 6 (lower is better)
Translates to: SGGEAFGVRATL*VLGSAGTSSSA
Trigger: TGCGGAGCTTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAACACCAAAGGCTTCACCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 72 bp TCCTCTGAACCATCCTTGGGCTTCATGGGGTTGGCATaGAGGATCCCTACGACAGTCCCCTGCTCCGTCTTC +
Preference number: 6 (lower is better)
Translates to: SSEPSLGFMGLA*RIPTTVPCSVF
Trigger: GAAGACGGAGCAGGGGACTGTCGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 72 bp CGAGGCAGAAGAAACCCCTCCGTAGTAAAAGCCATCTaGGCACAGCCGTTCTTTGAGGCTGGTGCCTCTGCG +
Preference number: 6 (lower is better)
Translates to: RGRRNPSVVKAI*AQPFFEAGASA
Trigger: CGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCCAAGATGGCTTTTACTACGGAGGGGTTTCTTCTGCCTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 72 bp TTCCTGGCTCCACACGTCGGCAGGTCCATCAGTTCCTaGAACTCCTCAGAGCAAGACAGGCTCTTCTGGGGT +
Preference number: 6 (lower is better)
Translates to: FLAPHVGRSISS*NSSEQDRLFWG
Trigger: ACCCCAGAAGAGCCTGTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACCTGCCGACGTGTGGAGCCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 72 bp CAGAGAAGGTGGACTGCAGATCCGCACGCTTTGCGCTaGGCTTCTTGTACTGAGCCTGGACATGGTACTGAC +
Preference number: 6 (lower is better)
Translates to: QRRWTADPHALR*ASCTEPGHGTD
Trigger: GTCAGTACCATGTCCAGGCTCAGTACAAGAAGCTCAGCGCAAAGCGTGCGGATCTGCAGTCCACCTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 72 bp TTCACCGTCGCCGTCGGCATCAAAGAGCTCATCAAATaGGTCGGGCTCGCCATTTTCCCGCGTCAAGAAGTT +
Preference number: 6 (lower is better)
Translates to: FTVAVGIKELIK*VGLAIFPRQEV
Trigger: AACTTCTTGACGCGGGAAAATGGCGAGCCCGACGCATTTGATGAGCTCTTTGATGCCGACGGCGACGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000479669.5
ENST00000484800.6
CDS GCA 72 bp TCCTCCAGAGAAGGTGGACTGCAGATCCGCACGCTTTaGGCTGAGCTTCTTGTACTGAGCCTGGACATGGTA +
Preference number: 6 (lower is better)
Translates to: SSREGGLQIRTL*AELLVLSLDMV
Trigger: TACCATGTCCAGGCTCAGTACAAGAAGCTCAGCGCAAAGCGTGCGGATCTGCAGTCCACCTTCTCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 72 bp GTGAAGCCTTTGGTGTTCGAGCCACCCTCTTGGTTCTaGGTAGCGCAGGGACATCAAGCTCCGCAGAAAAGC +
Preference number: 6 (lower is better)
Translates to: VKPLVFEPPSWF*VAQGHQAPQKS
Trigger: GCTTTTCTGCGGAGCTTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAACACCAAAGGCTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 90 bp AGCTGCATACGAGGCAGAAGAAACCCCTCCGTAGTAAAAGCCATCTaGGCACAGCCGTTCTTTGAGGCTGGTGCCTCTGCGGGCAAACTT +
Preference number: 6 (lower is better)
Translates to: SCIRGRRNPSVVKAI*AQPFFEAGASAGKL
Trigger: AAGTTTGCCCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCCAAGATGGCTTTTACTACGGAGGGGTTTCTTCTGCCTCGTATGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 90 bp ATCCGCTGCTTCTGTTGCTTCAAGAGTGCTGAGGCCGAGATGGACTaGATGGCTGGTTTTGGGCTCCCCATAATCCCTGAAGCTGTGGCT +
Preference number: 6 (lower is better)
Translates to: IRCFCCFKSAEAEMD*MAGFGLPIIPEAVA
Trigger: AGCCACAGCTTCAGGGATTATGGGGAGCCCAAAACCAGCCATCAAGTCCATCTCGGCCTCAGCACTCTTGAAGCAACAGAAGCAGCGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 72 bp CTCCAACATCCGCTGCTTCTGTTGCTTCAAGAGTGCTaGGGCCGAGATGGACTTGATGGCTGGTTTTGGGCT +
Preference number: 6 (lower is better)
Translates to: LQHPLLLLLQEC*GRDGLDGWFWA
Trigger: AGCCCAAAACCAGCCATCAAGTCCATCTCGGCCTCAGCACTCTTGAAGCAACAGAAGCAGCGGATGTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 72 bp CACGTGGGACAAAGAGCTCCAGGTGATTCTCATACCTaGAGTGCTTGTTCGGGAGTCTGTCCAAGGAGATGC +
Preference number: 6 (lower is better)
Translates to: HVGQRAPGDSHT*SACSGVCPRRC
Trigger: GCATCTCCTTGGACAGACTCCCGAACAAGCACTGCAGGTATGAGAATCACCTGGAGCTCTTTGTCCCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485659.1
CDS CCA 72 bp TGGTCCAGGGCAAGAGATGTTAGGACCCATCCAAACTaGGGGCTGTGGTCAAATGAGAGAAGAATCCCCTCG +
Preference number: 6 (lower is better)
Translates to: WSRARDVRTHPN*GLWSNERRIPS
Trigger: CGAGGGGATTCTTCTCTCATTTGACCACAGCCCCCAGTTTGGATGGGTCCTAACATCTCTTGCCCTGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481292.1
CDS CAA 90 bp GATCTGGAGGTGAAGCCTTTGGTGTTCGAGCCACCCTCTTGGTTCTaGGTAGCGCAGGGACATCAAGCTCCGCAGAAAAGCATGTTGACT +
Preference number: 6 (lower is better)
Translates to: DLEVKPLVFEPPSWF*VAQGHQAPQKSMLT
Trigger: AGTCAACATGCTTTTCTGCGGAGCTTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAACACCAAAGGCTTCACCTCCAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 90 bp CTTTTGGGATCTGGAGGTGAAGCCTTTGGTGTTCGAGCCACCCTCTaGGTTCTTGGTAGCGCAGGGACATCAAGCTCCGCAGAAAAGCAT +
Preference number: 6 (lower is better)
Translates to: LLGSGGEAFGVRATL*VLGSAGTSSSAEKH
Trigger: ATGCTTTTCTGCGGAGCTTGATGTCCCTGCGCTACCAAGAACCAAGAGGGTGGCTCGAACACCAAAGGCTTCACCTCCAGATCCCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 90 bp ATAGATAAACACACCTCCTCTGAACCATCCTTGGGCTTCATGGGGTaGGCATTGAGGATCCCTACGACAGTCCCCTGCTCCGTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: IDKHTSSEPSLGFMG*ALRIPTTVPCSVFQ
Trigger: CTGGAAGACGGAGCAGGGGACTGTCGTAGGGATCCTCAATGCCAACCCCATGAAGCCCAAGGATGGTTCAGAGGAGGTGTGTTTATCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 72 bp CTCCGTAGTAAAAGCCATCTTGGCACAGCCGTTCTTTaGGGCTGGTGCCTCTGCGGGCAAACTTCTTTGGAA +
Preference number: 6 (lower is better)
Translates to: LRSKSHLGTAVL*GWCLCGQTSLE
Trigger: TTCCAAAGAAGTTTGCCCGCAGAGGCACCAGCCTCAAAGAACGGCTGTGCCAAGATGGCTTTTACTACGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 72 bp AACCTCTTCACACCATCATGCCAGTGGTATTCATGCTaGTCACTGACGCAGGTCTCCAGCAGCTTGAAGTGG +
Preference number: 6 (lower is better)
Translates to: NLFTPSCQWYSC*SLTQVSSSLKW
Trigger: CCACTTCAAGCTGCTGGAGACCTGCGTCAGTGAGCAGCATGAATACCACTGGCATGATGGTGTGAAGAGGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
ENST00000485659.1
CDS CCA 72 bp TTCTTTGAGGCTGGTGCCTCTGCGGGCAAACTTCTTTaGAATTCGTCCTCCAGAGAAGGTGGACTGCAGATC +
Preference number: 6 (lower is better)
Translates to: FFEAGASAGKLL*NSSSREGGLQI
Trigger: GATCTGCAGTCCACCTTCTCTGGAGGACGAATTCCAAAGAAGTTTGCCCGCAGAGGCACCAGCCTCAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 90 bp TGTTTTAAGTTCCTGGCTCCACACGTCGGCAGGTCCATCAGTTCCTaGAACTCCTCAGAGCAAGACAGGCTCTTCTGGGGTATTCCGAGT +
Preference number: 6 (lower is better)
Translates to: CFKFLAPHVGRSISS*NSSEQDRLFWGIPS
Trigger: ACTCGGAATACCCCAGAAGAGCCTGTCTTGCTCTGAGGAGTTCAAGGAACTGATGGACCTGCCGACGTGTGGAGCCAGGAACTTAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 90 bp TCCGAGAAATCGTCTGTAGGGGTTGGGAGGGTGCACTTGTCATCCTaGAAGATGAGCTTTTGGGATCTGGAGGTGAAGCCTTTGGTGTTC +
Preference number: 6 (lower is better)
Translates to: SEKSSVGVGRVHLSS*KMSFWDLEVKPLVF
Trigger: GAACACCAAAGGCTTCACCTCCAGATCCCAAAAGCTCATCTTCAAGGATGACAAGTGCACCCTCCCAACCCCTACAGACGATTTCTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 72 bp TCTTCCTCCTCATCCATGCTGTCAAGAGGACAGTTGTaGCAGGAAACTTCGAAGGAGGCTCAGATGCCCAGA +
Preference number: 6 (lower is better)
Translates to: SSSSSMLSRGQL*QETSKEAQMPR
Trigger: TCTGGGCATCTGAGCCTCCTTCGAAGTTTCCTGTCACAACTGTCCTCTTGACAGCATGGATGAGGAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 72 bp AACTTCTTTGGAATTCGTCCTCCAGAGAAGGTGGACTaGAGATCCGCACGCTTTGCGCTGAGCTTCTTGTAC +
Preference number: 6 (lower is better)
Translates to: NFFGIRPPEKVD*RSARFALSFLY
Trigger: GTACAAGAAGCTCAGCGCAAAGCGTGCGGATCTGCAGTCCACCTTCTCTGGAGGACGAATTCCAAAGAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 72 bp GACAGTTGTGACAGGAAACTTCGAAGGAGGCTCAGATaGCCAGATGAGCAATGTAGAATCTTGGCCGATGCC +
Preference number: 6 (lower is better)
Translates to: DSCDRKLRRRLR*PDEQCRILADA
Trigger: GGCATCGGCCAAGATTCTACATTGCTCATCTGGGCATCTGAGCCTCCTTCGAAGTTTCCTGTCACAACTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378714.8
ENST00000484800.6
CDS CAA 72 bp TTCTGTTGCTTCAAGAGTGCTGAGGCCGAGATGGACTaGATGGCTGGTTTTGGGCTCCCCATAATCCCTGAA +
Preference number: 6 (lower is better)
Translates to: FCCFKSAEAEMD*MAGFGLPIIPE
Trigger: TTCAGGGATTATGGGGAGCCCAAAACCAGCCATCAAGTCCATCTCGGCCTCAGCACTCTTGAAGCAACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 72 bp GACAGTACTCACAGTCACGCAAATTCACAGTCTGCGTaGACGGCTCTCCATTCTTCTTCTTGGCTTTACAGG +
Preference number: 6 (lower is better)
Translates to: DSTHSHANSQSA*TALHSSSWLYR
Trigger: CCTGTAAAGCCAAGAAGAAGAATGGAGAGCCGTGCACGCAGACTGTGAATTTGCGTGACTGTGAGTACTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS GCA 72 bp AAAAACCTCTTCACACCATCATGCCAGTGGTATTCATaGTGCTCACTGACGCAGGTCTCCAGCAGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: KNLFTPSCQWYS*CSLTQVSSSLK
Trigger: CTTCAAGCTGCTGGAGACCTGCGTCAGTGAGCAGCATGAATACCACTGGCATGATGGTGTGAAGAGGTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
ENST00000485659.1
CDS CCA 72 bp CCACTAGGTTTGTTCCGAGAAATCGTCTGTAGGGGTTaGGAGGGTGCACTTGTCATCCTTGAAGATGAGCTT +
Preference number: 6 (lower is better)
Translates to: PLGLFREIVCRG*EGALVILEDEL
Trigger: AAGCTCATCTTCAAGGATGACAAGTGCACCCTCCCAACCCCTACAGACGATTTCTCGGAACAAACCTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CAA 72 bp TTGATGAAGATGGCACAGCTGGGCTCTCAACTTCACTaGAGCTCTGCAGAAATCGCTTCTGTATTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: LMKMAQLGSQLH*SSAEIASVFLL
Trigger: CAGAAGAAATACAGAAGCGATTTCTGCAGAGCTCAAGTGAAGTTGAGAGCCCAGCTGTGCCATCTTCATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000459751.1
ENST00000484800.6
CDS CAA 72 bp GTTTGTGCCCTTAACAACCAGATTACTCAGAGTGGTTaGAATCTTCTTCTTAGGAGCCACAGCTGCTGCAAT +
Preference number: 6 (lower is better)
Translates to: VCALNNQITQSG*NLLLRSHSCCN
Trigger: ATTGCAGCAGCTGTGGCTCCTAAGAAGAAGATTCAAACCACTCTGAGTAATCTGGTTGTTAAGGGCACAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS TCA 72 bp TTTGTGCCCTTAACAACCAGATTACTCAGAGTGGTTTaGATCTTCTTCTTAGGAGCCACAGCTGCTGCAATT +
Preference number: 6 (lower is better)
Translates to: FVPLTTRLLRVV*IFFLGATAAAI
Trigger: AATTGCAGCAGCTGTGGCTCCTAAGAAGAAGATTCAAACCACTCTGAGTAATCTGGTTGTTAAGGGCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000484800.6
CDS CCA 72 bp TGGGTCACTAAAAGGAGTCAAAAATTAGTACGCAAATaGCATACCTTTAGCATTCCGTCCCGTTCCCATTTG +
Preference number: 6 (lower is better)
Translates to: WVTKRSQKLVRK*HTFSIPSRSHL
Trigger: CAAATGGGAACGGGACGGAATGCTAAAGGTATGCCATTTGCGTACTAATTTTTGACTCCTTTTAGTGACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378694.1
CDS CCA 72 bp TCAAGTGCTAAAGAGAAGAGATGCCAGTTACCTTTTTaGCTTCTGCTAAAGCACTCAGTTTTGGTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SSAKEKRCQLPF*LLLKHSVLVLV
Trigger: CACCAAGACCAAAACTGAGTGCTTTAGCAGAAGCCAAAAAGGTAACTGGCATCTCTTCTCTTTAGCACTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459751.1
CDS CAA 90 bp AAGAGATGCCAGTTACCTTTTTGGCTTCTGCTAAAGCACTCAGTTTaGGTCTTGGTGGTGGTGACTCATCATAAAAGAGAACATCATCTC +
Preference number: 6 (lower is better)
Translates to: KRCQLPFWLLLKHSV*VLVVVTHHKREHHL
Trigger: GAGATGATGTTCTCTTTTATGATGAGTCACCACCACCAAGACCAAAACTGAGTGCTTTAGCAGAAGCCAAAAAGGTAACTGGCATCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459751.1
CDS CAA 72 bp CAGTTACCTTTTTGGCTTCTGCTAAAGCACTCAGTTTaGGTCTTGGTGGTGGTGACTCATCATAAAAGAGAA +
Preference number: 6 (lower is better)
Translates to: QLPFWLLLKHSV*VLVVVTHHKRE
Trigger: TTCTCTTTTATGATGAGTCACCACCACCAAGACCAAAACTGAGTGCTTTAGCAGAAGCCAAAAAGGTAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000459751.1
CDS CCA 72 bp TTCTTAATGCTGTTTGGGTTTGTTTTTGTAAGAACCTaGCCTTTTGCCCTTAATTTGGTGATAGCAGCTAAC +
Preference number: 6 (lower is better)
Translates to: FLMLFGFVFVRT*PFALNLVIAAN
Trigger: GTTAGCTGCTATCACCAAATTAAGGGCAAAAGGCCAGGTTCTTACAAAAACAAACCCAAACAGCATTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000378694.1
ENST00000378714.8
ENST00000481292.1
ENST00000484800.6