RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCHR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000128285

Ensembl transcript IDs: ENST00000249016.4, ENST00000381433.2, ENST00000465662.1, ENST00000498400.1

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCCTGGCTaGTCACTCCAGCCCTGCCTGACTTTAAACAAACCCAGTCAGTAC +
Preference number: 1 (lower is better)
Translates to: RALSRLSGLVQHGPG*SLQPCLTLNKPSQY
Trigger: GTACTGACTGGGTTTGTTTAAAGTCAGGCAGGGCTGGAGTGAGCAGCCAGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CCA 90 bp CGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCCTaGCTGCTCACTCCAGCCCTGCCTGACTTTAAACAAACCCAGTCA +
Preference number: 1 (lower is better)
Translates to: RSGPFPSLRPCATWP*LLTPALPDFKQTQS
Trigger: TGACTGGGTTTGTTTAAAGTCAGGCAGGGCTGGAGTGAGCAGCCAGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR GCA 90 bp CTCTCAGGCCTTGTGCAACATGGCCCTGGCTGCTCACTCCAGCCCTaGCTGACTTTAAACAAACCCAGTCAGTACCCTTCCACCTCTTGC +
Preference number: 1 (lower is better)
Translates to: LSGLVQHGPGCSLQP*LTLNKPSQYPSTSC
Trigger: GCAAGAGGTGGAAGGGTACTGACTGGGTTTGTTTAAAGTCAGGCAGGGCTGGAGTGAGCAGCCAGGGCCATGTTGCACAAGGCCTGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR GCA 90 bp CTCACAGATATAGTGCAACCGGTTATCCAAACCAACATGTTCTCTTaGTCAGCTTCTGTTCTATCCAAAGGTCTCATCCTGCTCCCCCAA +
Preference number: 1 (lower is better)
Translates to: LTDIVQPVIQTNMFS*SASVLSKGLILLPQ
Trigger: TTGGGGGAGCAGGATGAGACCTTTGGATAGAACAGAAGCTGAGCAAGAGAACATGTTGGTTTGGATAACCGGTTGCACTATATCTGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR GCA 90 bp AGCAAAAGGGAAATTGACAGGATGCTGGAACGCCGAGAGATGGGATaGTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTT +
Preference number: 1 (lower is better)
Translates to: SKREIDRMLERREMG*FIFHYPPAWEKGHL
Trigger: AAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCCTTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CCA 90 bp TCTAGAGCAAAAGGGAAATTGACAGGATGCTGGAACGCCGAGAGATaGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCC +
Preference number: 1 (lower is better)
Translates to: SRAKGKLTGCWNAER*DALFFIIHQLGRKA
Trigger: GGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCCTTTTGCTCTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR GCA 90 bp TCAAATAAACATGCATCCTCTAGAGCAAAAGGGAAATTGACAGGATaGTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTATCCAC +
Preference number: 1 (lower is better)
Translates to: SNKHASSRAKGKLTG*WNAERWDALFFIIH
Trigger: GTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCCTTTTGCTCTAGAGGATGCATGTTTATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR TCA 90 bp CCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGCGTGTTGTGGTGCCCTaGCTTGGAGGTGTGCAGGGT +
Preference number: 2 (lower is better)
Translates to: PAFLHFPSGLGFFSASLPRVVVP*LGGVQG
Trigger: ACCCTGCACACCTCCAAGTCAGGGCACCACAACACG...CGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR-3UTR GCA 90 bp CAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTGGTGGCGTGTTGTGGTaGCCTGACTTGGAGGTGTGC +
Preference number: 2 (lower is better)
Translates to: QQPLTTRPSCISRAVLGFGGVLW*PDLEVC
Trigger: GCACACCTCCAAGTCAGGGCACCACAACACGCCACC...AAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR-3UTR CCA 90 bp CAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTaGTGCCCTGACTTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: QPGLPAFPERSWVFLSISPGGVL*CPDLEV
Trigger: CACCTCCAAGTCAGGGCACCACAACACGCCACCGGG...AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR-3UTR CCA 90 bp CACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCCCGGTGGCGTGTTGTaGTGCCCTGACTTGGAGGTG +
Preference number: 2 (lower is better)
Translates to: HNPAFLHFPSGLGFFSASPGGVL*CPDLEV
Trigger: CACCTCCAAGTCAGGGCACCACAACACGCCACCGGG...AGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR-3UTR GCA 90 bp CAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTCCTGACTTGGAGGTGTaGAGGGTGGCAGGGGAAGTA +
Preference number: 2 (lower is better)
Translates to: QQPLTTRPSCISRAVLGFPDLEV*RVAGEV
Trigger: TACTTCCCCTGCCACCCTGCACACCTCCAAGTCAGG...AAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR-3UTR TCA 90 bp TTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGCGTGTTGTGGTGCCCTaGCTTGGAGGTGTGCAGGGT +
Preference number: 2 (lower is better)
Translates to: LFHCNNPSQPGLPAFPERRVVVP*LGGVQG
Trigger: ACCCTGCACACCTCCAAGTCAGGGCACCACAACACG...CCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR-3UTR GCA 90 bp CTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCCTGACTTGGAGGTGTaGAGGGTGGCAGGGGAAGTA +
Preference number: 2 (lower is better)
Translates to: LTTRPSCISRAVLGFSQHPDLEV*RVAGEV
Trigger: TACTTCCCCTGCCACCCTGCACACCTCCAAGTCAGG...ATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR-3UTR CCA 90 bp CGGGAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCTTTCCCGAGCGGTCTTaGGTTTTTCTCAGCATCTCT +
Preference number: 2 (lower is better)
Translates to: RERAIGPFPVSQALCNMAFPERS*VFLSIS
Trigger: AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAA...GGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR CCA 90 bp GATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACACGGACGACCTCCTAGCAAACTaGGCTTTTACTCCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: DANTPGTRMTPAHAEHTDDLLAN*AFTPVG
Trigger: GCCCACAGGAGTAAAAGCCCAGTTTGCTAGGAGGTC...GTCCGTGTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR GCA 90 bp AAAGATGATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACACAACCCGGCCTTCCTaGATTTCCCGAGCGGTCTTG +
Preference number: 2 (lower is better)
Translates to: KDDANTPGTRMTPAHAEHTTRPS*ISRAVL
Trigger: CAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGT...GTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATCATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR CCA 90 bp AAACTGGGCTTTTACTCCTGTGGGCTCAGTGCCACATCCCCTCAAATAAACATGTGTGCAACATGGCCCTaGCTGCTCACTCCAGCCCTG +
Preference number: 2 (lower is better)
Translates to: KLGFYSCGLSATSPQINMCATWP*LLTPAL
Trigger: CAGGGCTGGAGTGAGCAGCCAGGGCCATGTTGCACA...CATGTTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAGTAAAAGCCCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CAA 90 bp GGAACGCCGAGAGATGGGATGCTTTATTTTTCATTATCCACCAGCTaGGGAGAAAGGCCACCTTCCATCGCACCAGTGAGAGGCGGGAAA +
Preference number: 2 (lower is better)
Translates to: GTPRDGMLYFSLSTS*GERPPSIAPVRGGK
Trigger: TTTCCCGCCTCTCACTGGTGCGATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR GCA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCATGTATTTATTTCATTaGAACAACCCCTCACAACCC +
Preference number: 2 (lower is better)
Translates to: TFHRTSERRERAIGPFPVMYLFH*NNPSQP
Trigger: GGGTTGTGAGGGGTTGTTGCAATGAAATAAATACAT...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR GCA 90 bp TGCCTGACTTTAAACAAACCCAGTCAGTACCCTTCCACCTCTTGCCTTGGGAAGCCAAAGGTCTCATCCTaGTCCCCCAAGGGGATTTCT +
Preference number: 2 (lower is better)
Translates to: CLTLNKPSQYPSTSCLGKPKVSS*SPKGIS
Trigger: AGAAATCCCCTTGGGGGAGCAGGATGAGACCTTTGG...CTTCCCAAGGCAAGAGGTGGAAGGGTACTGACTGGGTTTGTTTAAAGTCAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR TCA 90 bp CCTGACTTTAAACAAACCCAGTCAGTACCCTTCCACCTCTTGCCTTGGGAAGAACTCCCCAGCAACGTGTaGGCCCCATGGAATGTATTT +
Preference number: 2 (lower is better)
Translates to: PDFKQTQSVPFHLLPWEELPSNV*APWNVF
Trigger: AAATACATTCCATGGGGCTCACACGTTGCTGGGGAG...TTCTTCCCAAGGCAAGAGGTGGAAGGGTACTGACTGGGTTTGTTTAAAGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CAA 90 bp GCTCACAGATATAGTGCAACCGGTTATCCAAACCAACATGTTCTCTaGCTCAGCTTCTGTTCTATCCAAAGGTCTCATCCTGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: AHRYSATGYPNQHVL*LSFCSIQRSHPAPP
Trigger: TGGGGGAGCAGGATGAGACCTTTGGATAGAACAGAAGCTGAGCAAGAGAACATGTTGGTTTGGATAACCGGTTGCACTATATCTGTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CAA 90 bp AACCCAGTCAGTACCCTTCCACCTCTTGCCTTGGGAAGAAGACATTaGAGAGCTCACAGATATAGTGCAACCGGTTATCCAAACCAACAT +
Preference number: 2 (lower is better)
Translates to: NPVSTLPPLALGRRH*RAHRYSATGYPNQH
Trigger: ATGTTGGTTTGGATAACCGGTTGCACTATATCTGTGAGCTCTCAAATGTCTTCTTCCCAAGGCAAGAGGTGGAAGGGTACTGACTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR GCA 90 bp ATGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATACCCTTCCACCTCTTaGCTTGGGAAGAAGACATTT +
Preference number: 2 (lower is better)
Translates to: MGCFIFHYPPAWEKGHLPYPSTS*LGKKTF
Trigger: AAATGTCTTCTTCCCAAGGCAAGAGGTGGAAGGGTA...TGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CCA 72 bp TCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTaGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTG +
Preference number: 3 (lower is better)
Translates to: SQPGLPAFPERS*VFLSISPGGVL
Trigger: CAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR-3UTR CAA 90 bp AAAGATGATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACCCCGTCTCTCAGGCCTaGTGCAACATGGCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: KDDANTPGTRMTPAHAEHPVSQA*CNMALA
Trigger: AGCCAGGGCCATGTTGCACAAGGCCTGAGAGACGGG...GTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATCATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CCA 72 bp CCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCCTaGCTGCTCACTCCAGCCCTGCCTGACTTTAAACAA +
Preference number: 3 (lower is better)
Translates to: PFPSLRPCATWP*LLTPALPDFKQ
Trigger: TTGTTTAAAGTCAGGCAGGGCTGGAGTGAGCAGCCAGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR CAA 90 bp CCGAGAGATGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCATCTCCCGGTGGCGTGTaGTGGTGCCCTGACTTGGAG +
Preference number: 3 (lower is better)
Translates to: PRDGMLYFSLSTSLGERPSPGGV*WCPDLE
Trigger: CTCCAAGTCAGGGCACCACAACACGCCACCGGGAGA...TGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR TCA 72 bp TGCAGAACACACGGACACTCAAGCTGGATTAGTGACTaGGCAAATGTGCCCCGTGGAGAGAATGTCACCAGA +
Preference number: 3 (lower is better)
Translates to: CRTHGHSSWISD*ANVPRGENVTR
Trigger: TCTGGTGACATTCTCTCCACGGGGCACATTTGCTCAGTCACTAATCCAGCTTGAGTGTCCGTGTGTTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR TCA 72 bp AGCAAAAAGATGATGCCAACACACCGGGCACTAGAATaGCCCCTGCACATGCAGAACACACGGACACTCAAG +
Preference number: 3 (lower is better)
Translates to: SKKMMPTHRALE*PLHMQNTRTLK
Trigger: CTTGAGTGTCCGTGTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATCATCTTTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR GCA 72 bp ATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTaGATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: ISLQQPLTTRPS*ISRAVLGFSQH
Trigger: ATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
3UTR GCA 72 bp ACGGACACTCAAGCTGGATTAGTGACTGAGCAAATGTaGCCCGTGGAGAGAATGTCACCAGAGCTGCAAAAG +
Preference number: 3 (lower is better)
Translates to: TDTQAGLVTEQM*PVERMSPELQK
Trigger: CTTTTGCAGCTCTGGTGACATTCTCTCCACGGGGCACATTTGCTCAGTCACTAATCCAGCTTGAGTGTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR-3UTR CAA 90 bp AAACTGGGCTTTTACTCCTGTGGGCTCAGTGCCACATCCCCTCAAATAAACATGCTTCCACCTCTTGCCTaGGGAAGAAGACATTTGAGA +
Preference number: 3 (lower is better)
Translates to: KLGFYSCGLSATSPQINMLPPLA*GRRHLR
Trigger: TCTCAAATGTCTTCTTCCCAAGGCAAGAGGTGGAAG...CATGTTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAGTAAAAGCCCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR TCA 72 bp CAAATAAACATGCATCCTCTAGAGCAAAAGGGAAATTaGCAGGATGCTGGAACGCCGAGAGATGGGATGCTT +
Preference number: 3 (lower is better)
Translates to: QINMHPLEQKGN*QDAGTPRDGML
Trigger: AAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCCTTTTGCTCTAGAGGATGCATGTTTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR GCA 72 bp CATGCATCCTCTAGAGCAAAAGGGAAATTGACAGGATaGTGGAACGCCGAGAGATGGGATGCTTTATTTTTC +
Preference number: 3 (lower is better)
Translates to: HASSRAKGKLTG*WNAERWDALFF
Trigger: GAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCCTTTTGCTCTAGAGGATGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CCA 72 bp AAAGGGAAATTGACAGGATGCTGGAACGCCGAGAGATaGGATGCTTTATTTTTCATTATCCACCAGCTTGGG +
Preference number: 3 (lower is better)
Translates to: KGKLTGCWNAER*DALFFIIHQLG
Trigger: CCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR GCA 72 bp ATAGTGCAACCGGTTATCCAAACCAACATGTTCTCTTaGTCAGCTTCTGTTCTATCCAAAGGTCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: IVQPVIQTNMFS*SASVLSKGLIL
Trigger: CAGGATGAGACCTTTGGATAGAACAGAAGCTGAGCAAGAGAACATGTTGGTTTGGATAACCGGTTGCACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR GCA 72 bp GAAATTGACAGGATGCTGGAACGCCGAGAGATGGGATaGTTTATTTTTCATTATCCACCAGCTTGGGAGAAA +
Preference number: 3 (lower is better)
Translates to: EIDRMLERREMG*FIFHYPPAWEK
Trigger: TTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCGCGCGAAGCTGCCCCTaGGCTGCAGGCTTCACCGAC +
Preference number: 4 (lower is better)
Translates to: TFHRTSERRERAIGPFPVARSCP*AAGFTD
Trigger: GTCGGTGAAGCCTGCAGCCCAGGGGCAGCTTCGCGC...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp TGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTGGAGGCGGGGGCCACTaGGGACGTCATGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: CNNPSQPGLPAFPERSWVGGGGH*GRHALQ
Trigger: CTGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCC...AACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp TGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTGCAGCCTCCAGCGCCTaGCACCTTGTCCCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: CNNPSQPGLPAFPERSWVAASSA*HLVPER
Trigger: GCGCTCCGGGACAAGGTGGCAGGCGCTGGAGGCTGC...AACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp GCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGTCCGCAGCCGGATGCTaGGCTGGGAGGCGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: AFLHFPSGLGFFSASLPVSAAGC*AGRRGP
Trigger: TGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGA...CACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGTTGTCCGCAGCCGGATaGTGCGCTGGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQLSAAG*CAGRRG
Trigger: CCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAA...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp ATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGAGCCGGATGCTGCGCTaGGAGGCGGGGGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: IATTPHNPAFLHFPSGLGSRMLR*EAGATE
Trigger: CTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCT...CCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCCTCCCACAACCGAGCTaGGCTCCCCTCCACCCACGC +
Preference number: 4 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSLPQPS*APLHPR
Trigger: GCGTGGGTGGAGGGGAGCTCAGCTCGGTTGTGGGAG...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGTTGTCCGCAGCCGGATaGTGCGCTGGGAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PSCISRAVLGFSQHLSRWLSAAG*CAGRRG
Trigger: CCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAA...CCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp CCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGAGCCGGATGCTGCGCTaGGAGGCGGGGGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: PSCISRAVLGFSQHLSRWSRMLR*EAGATE
Trigger: CTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCT...CCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp CGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGCCGTCTGAGCGTTGCTaGCAGCGCGAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RPSCISRAVLGFSQHLSRPSERC*QREAAP
Trigger: AGGGGCAGCTTCGCGCTGTCAGCAACGCTCAGACGG...CCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCCGTCTGAGCGTTGCTaGCAGCGCGAAGCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQPSERC*QREAAP
Trigger: AGGGGCAGCTTCGCGCTGTCAGCAACGCTCAGACGG...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp ACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTCGGCCCCTTCCCTGTaGCCTGACGGCTTCCAACTA +
Preference number: 4 (lower is better)
Translates to: TSERRERAIGPFPVSQALSAPSL*PDGFQL
Trigger: TAGTTGGAAGCCGTCAGGGCACAGGGAAGGGGCCGA...CAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCCCAGTGCCGGTCGCCTaGTCCCACAACCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSPVPVA*SHNRAE
Trigger: CTCAGCTCGGTTGTGGGAGCAGGCGACCGGCACTGG...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp CCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCTCTTCCTCCGTAGCCTaGCAGCCGCTGCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PGLPAFPERSWVFLSISPSSSVA*QPLPPP
Trigger: TGGAGGCGGCAGCGGCTGCCAGGCTACGGAGGAAGA...GGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp GCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTCGCAAGCCCCGCAGTTaGGAAGGGGGTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: ATTPHNPAFLHFPSGLGFRKPRS*EGGLPP
Trigger: CGGAGGAAGACCCCCTTCCCAACTGCGGGGCTTGCG...AAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp TTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGGCGCGAAGCTGCCCCTaGGCTGCAGGCTTCACCGAC +
Preference number: 4 (lower is better)
Translates to: FLHFPSGLGFFSASLPVAARSCP*AAGFTD
Trigger: GTCGGTGAAGCCTGCAGCCCAGGGGCAGCTTCGCGC...CGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCTGTGCAACATGGCCCTaGCTGCTCACTCCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TFHRTSERRERAIGPFPVCATWP*LLTPAL
Trigger: CAGGGCTGGAGTGAGCAGCCAGGGCCATGTTGCACA...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CAA 72 bp GAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTaGTGCAACATGGCCCTGGCTGCTCACTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ERAIGPFPVSQA*CNMALAAHSSP
Trigger: AGGGCTGGAGTGAGCAGCCAGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp ATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGCCGTGGAGTTCCCGATaGTGCCCAGGAGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: IATTPHNPAFLHFPSGLGPWSSR*CPGGRW
Trigger: CCATCTGCCTCCTGGGCATCATCGGGAACTCCACGG...CCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp GCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTCCTCGTCAGCCGTCTaGGCGTTGCTGACAGCGCGA +
Preference number: 4 (lower is better)
Translates to: ATTPHNPAFLHFPSGLGFSSSAV*ALLTAR
Trigger: TCGCGCTGTCAGCAACGCTCAGACGGCTGACGAGGA...AAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCCTTCCATCGCACCAGTaGGAGGCGGGAAAGAGCGAT +
Preference number: 4 (lower is better)
Translates to: TFHRTSERRERAIGPFPVLPSHQ*EAGKSD
Trigger: ATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAG...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGGCAGCCTCCAGCGCCTaGCACCTTGTCCCGGAGCGC +
Preference number: 4 (lower is better)
Translates to: LFHCNNPSQPGLPAFPERAASSA*HLVPER
Trigger: GCGCTCCGGGACAAGGTGGCAGGCGCTGGAGGCTGC...CCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGGTCCATCCAGCCAGTaGCGGTCGCCTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: LPAFPERSWVFLSISPGGGPSSQ*RSPAPT
Trigger: TGTGGGAGCAGGCGACCGGCACTGGCTGGATGGACC...GCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGAGGAGATGCTCCCCGTaGGAGGAGGTGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQRRCSP*EEVILP
Trigger: CGGCAGGATCACCTCCTCGCACGGGGAGCATCTCCT...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp GCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGCTGACAGCGCGAAGCTaGCCCTGGGCTGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AFLHFPSGLGFFSASLPVLTARS*PWAAGF
Trigger: GAAGCCTGCAGCCCAGGGGCAGCTTCGCGCTGTCAG...CACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTCTGACAGCGCGAAGCTaGCCCTGGGCTGCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LHFPSGLGFFSASLPVACLTARS*PWAAGF
Trigger: GAAGCCTGCAGCCCAGGGGCAGCTTCGCGCTGTCAG...ACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCACAACCCGGCCTTCCTaGATTTCCCGAGCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TFHRTSERRERAIGPFPVTTRPS*ISRAVL
Trigger: CAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGT...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp TGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTCCCGGTGGCGTGTTGTaGTGCCCTGACTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CNNPSQPGLPAFPERSWVPGGVL*CPDLEV
Trigger: CACCTCCAAGTCAGGGCACCACAACACGCCACCGGG...AACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCCGTGTTGTGGTGCCCTaGCTTGGAGGTGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSRVVVP*LGGVQG
Trigger: ACCCTGCACACCTCCAAGTCAGGGCACCACAACACG...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGGCTTCCACTTCTGAATaGCTGCAGAGCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQASTSE*LQSPRA
Trigger: GGCCCTGGGGCTCTGCAGGCATTCAGAAGTGGAAGC...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp TGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGGTCCATCCAGCCAGTaGCGGTCGCCTGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: CISRAVLGFSQHLSRWRVGPSSQ*RSPAPT
Trigger: TGTGGGAGCAGGCGACCGGCACTGGCTGGATGGACC...AACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCAAGCTGCCCCTGGGCTaGAGGCTTCACCGACAGGAC +
Preference number: 4 (lower is better)
Translates to: LPAFPERSWVFLSISPGGKLPLG*RLHRQD
Trigger: GTCCTGTCGGTGAAGCCTGCAGCCCAGGGGCAGCTT...GCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp GCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGAAGCTGCCCCTGGGCTaGAGGCTTCACCGACAGGAC +
Preference number: 4 (lower is better)
Translates to: AFLHFPSGLGFFSASLPVKLPLG*RLHRQD
Trigger: GTCCTGTCGGTGAAGCCTGCAGCCCAGGGGCAGCTT...CACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCGAGGAGAGAGCAGCTTaGCTTAGCCCCTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFHRTSERRERAIGPFPVEERAA*LSPYSR
Trigger: CCTGGAATAGGGGCTAAGCCAAGCTGCTCTCTCCTC...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp ACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCCGCAAGCCCCGCAGTTaGGAAGGGGGTCTTCCTCCG +
Preference number: 4 (lower is better)
Translates to: TTRPSCISRAVLGFSQHLRKPRS*EGGLPP
Trigger: CGGAGGAAGACCCCCTTCCCAACTGCGGGGCTTGCG...GAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp TTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGGTGGCGTTGGGACCAGTaGGCAGCAGCGAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FPERSWVFLSISPGGVLWWRWDQ*AAARLP
Trigger: TGGAAGCCTCGCTGCTGCCCACTGGTCCCAACGCCA...CCACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp GCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGAGGTGTTGCTGGCGTTaGGACCAGTGGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: AFLHFPSGLGFFSASLPVRCCWR*DQWAAA
Trigger: CGCTGCTGCCCACTGGTCCCAACGCCAGCAACACCT...CACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp CCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCAAGGTGTTGCTGGCGTTaGGACCAGTGGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PHNPAFLHFPSGLGFFSARCCWR*DQWAAA
Trigger: CGCTGCTGCCCACTGGTCCCAACGCCAGCAACACCT...TGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp GCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTGCCCAGGAGGCAGATaGTGCCGAACACCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ATTPHNPAFLHFPSGLGFCPGGR*CRTPKA
Trigger: TGCCTTCGGTGTTCGGCACCATCTGCCTCCTGGGCA...AAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCCAGACAGATGGCGATaGCTGTGCGGGTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQPDRWR*LCGSPS
Trigger: AGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGG...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp TGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTGTGATCCTGCCGAAGTaGGGTTATCGGGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: CNNPSQPGLPAFPERSWVVILPK*GYRGHQ
Trigger: CTGATGGCCCCGATAACCTCACTTCGGCAGGATCAC...AACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp ATTTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGAGGCGGGGGCCACTaGGGACGTCATGCGCTGCAG +
Preference number: 4 (lower is better)
Translates to: IYFIATTPHNPAFLHFPSGGGGH*GRHALQ
Trigger: CTGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCC...GCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp GATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACACGGACCGTGTTGTGGTGCCCTaGCTTGGAGGTGTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: DANTPGTRMTPAHAEHTDRVVVP*LGGVQG
Trigger: ACCCTGCACACCTCCAAGTCAGGGCACCACAACACG...GTCCGTGTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp ACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGCTCCCCAGCAACGTGTaGGCCCCATGGAATGTATTT +
Preference number: 4 (lower is better)
Translates to: TSERRERAIGPFPVSQALLPSNV*APWNVF
Trigger: AAATACATTCCATGGGGCTCACACGTTGCTGGGGAG...CAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGGGCCATCAGAGGTGTTaGTGGCGTTGGGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSCISRAVLGFSQHLSRWGHQRC*WRWDQW
Trigger: CCACTGGTCCCAACGCCAGCAACACCTCTGATGGCC...CCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCGAGGACGTCATGCGCTaGAGGATCCTCACGTATGCG +
Preference number: 4 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSEDVMR*RILTYA
Trigger: CGCATACGTGAGGATCCTGCAGCGCATGACGTCCTC...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCTGACTTTAAACAAACCCAGTCAGTACCCTTCCACCTCTTGCCTTGGGAAGAATCCGCAGCCGGATGCTaGGCTGGGAGGCGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PDFKQTQSVPFHLLPWEESAAGC*AGRRGP
Trigger: TGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGA...TTCTTCCCAAGGCAAGAGGTGGAAGGGTACTGACTGGGTTTGTTTAAAGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGGTGGCGTGTTGTGGTaGCCTGACTTGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPAFPERSWVFLSISPGGGGVLW*PDLEVC
Trigger: GCACACCTCCAAGTCAGGGCACCACAACACGCCACC...GCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCACAACCCGGCCTTCCTaGATTTCCCGAGCGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSTTRPS*ISRAVL
Trigger: CAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGT...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp CCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGGAAGCTGGGAGGGACTaGACACAGGCAGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: PSCISRAVLGFSQHLSRWEAGRD*TQAAPS
Trigger: TGATGGGGCTGCCTGTGTCCAGTCCCTCCCAGCTTC...CCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCCCACTCCCTTCTTCATaGCTCCCACTGACATCACCT +
Preference number: 4 (lower is better)
Translates to: TFHRTSERRERAIGPFPVPLPSS*LPLTSP
Trigger: AGGTGATGTCAGTGGGAGCCATGAAGAAGGGAGTGG...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp ATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGTGGCGTTGGGACCAGTaGGCAGCAGCGAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ISRAVLGFSQHLSRWRVVWRWDQ*AAARLP
Trigger: TGGAAGCCTCGCTGCTGCCCACTGGTCCCAACGCCA...CACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp TTGGGAGAAAGGCCACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGCATCAGAGGTGTTGCTaGCGTTGGGACCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LGERPPSIAPVRGGKERSHQRCC*RWDQWA
Trigger: TGCCCACTGGTCCCAACGCCAGCAACACCTCTGATG...CGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGTGGCCTTTCTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCCATCAGAGGTGTTGCTaGCGTTGGGACCAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSHQRCC*RWDQWA
Trigger: TGCCCACTGGTCCCAACGCCAGCAACACCTCTGATG...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp AAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCCTGGGCTTCCGGAACTTCGTaGAAGAGATGGGGTGGACAG +
Preference number: 4 (lower is better)
Translates to: KERSGPFPSLRPCATWPWASGTS*KRWGGQ
Trigger: CTGTCCACCCCATCTCTTCCACGAAGTTCCGGAAGC...CCAGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp ACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCCCCGGTGGCGTGTTGTaGTGCCCTGACTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TTRPSCISRAVLGFSQHLPGGVL*CPDLEV
Trigger: CACCTCCAAGTCAGGGCACCACAACACGCCACCGGG...GAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp GCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGTGATCCTGCCGAAGTaGGGTTATCGGGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: AFLHFPSGLGFFSASLPVVILPK*GYRGHQ
Trigger: CTGATGGCCCCGATAACCTCACTTCGGCAGGATCAC...CACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp TTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGCCGTGGAGTTCCCGATaGTGCCCAGGAGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LFHCNNPSQPGLPAFPERPWSSR*CPGGRW
Trigger: CCATCTGCCTCCTGGGCATCATCGGGAACTCCACGG...CCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp TTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCCTCGTCAGCCGTCTaGGCGTTGCTGACAGCGCGA +
Preference number: 4 (lower is better)
Translates to: LFHCNNPSQPGLPAFPERSSSAV*ALLTAR
Trigger: TCGCGCTGTCAGCAACGCTCAGACGGCTGACGAGGA...CCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp TATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTAGGAGATGCTCCCCGTaGGAGGAGGTGATCCTGCCG +
Preference number: 4 (lower is better)
Translates to: YFIATTPHNPAFLHFPSGRRCSP*EEVILP
Trigger: CGGCAGGATCACCTCCTCGCACGGGGAGCATCTCCT...ACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGTGTCGGGGACGTTGTTaGACCAGTGCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: PAFLHFPSGLGFFSASLPCRGRC*TSAAWT
Trigger: AGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACA...CGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTTATGCCGCAGCCCACTaGACCTCCTGGGAAGGGGAT +
Preference number: 4 (lower is better)
Translates to: QPGLPAFPERSWVFLSISYAAAH*TSWEGD
Trigger: ATCCCCTTCCCAGGAGGTGCAGTGGGCTGCGGCATA...AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp GATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACACGGACGAGGACGTCATGCGCTaGAGGATCCTCACGTATGCG +
Preference number: 4 (lower is better)
Translates to: DANTPGTRMTPAHAEHTDEDVMR*RILTYA
Trigger: CGCATACGTGAGGATCCTGCAGCGCATGACGTCCTC...GTCCGTGTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGGCCTGACTTGGAGGTGTaGAGGGTGGCAGGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: FPERSWVFLSISPGGVLWPDLEV*RVAGEV
Trigger: TACTTCCCCTGCCACCCTGCACACCTCCAAGTCAGG...CCACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGTATTCCAGGTATGGGTaGCTGGGCCACATGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQYSRYG*LGHMAE
Trigger: CTCTGCCATGTGGCCCAGCCACCCATACCTGGAATA...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCAGGCTGCCTCCCTTTaGAGGAGAGAGCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LTTRPSCISRAVLGFSQHQAASL*RREQLG
Trigger: GCCAAGCTGCTCTCTCCTCCAAAGGGAGGCAGCCTG...ATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp ATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGCCAGACAGATGGCGATaGCTGTGCGGGTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: ISRAVLGFSQHLSRWRVVPDRWR*LCGSPS
Trigger: AGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGG...CACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCCATTATCCACCAGCTTaGGAGAAAGGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: TFHRTSERRERAIGPFPVHYPPA*EKGHLP
Trigger: TGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATG...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CAA 72 bp CTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTaGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTT +
Preference number: 4 (lower is better)
Translates to: LTTRPSCISRAV*GFSQHLSRWRV
Trigger: AACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp TGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTGGATCTCCTTCCCACTaGCACTTGGGATTGTCTCGT +
Preference number: 4 (lower is better)
Translates to: CNNPSQPGLPAFPERSWVGSPSH*HLGLSR
Trigger: ACGAGACAATCCCAAGTGTCAGTGGGAAGGAGATCC...AACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp GGAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCCTTGGCATAGCCCAAGCTaGTGGCCGCATTGTATAAGT +
Preference number: 4 (lower is better)
Translates to: GKSDRALSRLSGLVQHGPWHSPS*WPHCIS
Trigger: ACTTATACAATGCGGCCATCAGCTTGGGCTATGCCA...AGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp CAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCACCGGGCACTAGAATaGCCCCTGCACATGCAGAAC +
Preference number: 4 (lower is better)
Translates to: QPGLPAFPERSWVFLSISHRALE*PLHMQN
Trigger: GTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTG...AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGGCTAGAGCAAAAAGATaGTGCCAACACACCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQARAKR*CQHTGH
Trigger: GTGCCCGGTGTGTTGGCATCATCTTTTTGCTCTAGC...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp GCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGGACAAACTCCTCTCTaGATGGGATCTGCCTGGACC +
Preference number: 4 (lower is better)
Translates to: AFLHFPSGLGFFSASLPVGQTPL*MGSAWT
Trigger: GGTCCAGGCAGATCCCATGCAGAGAGGAGTTTGTCC...CACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCAGCTTACAGGGGCTGCTaGTTGCCTTGCGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: PHNPAFLHFPSGLGFFSAAYRGC*LPCVKI
Trigger: GATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGC...TGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp GGAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCCTCAGGATCCTCACGTATaGGGCTGTGATGACCACAAA +
Preference number: 4 (lower is better)
Translates to: GKSDRALSRLSGLVQHGPQDPHV*GCDDHK
Trigger: TTTGTGGTCATCACAGCCGCATACGTGAGGATCCTG...AGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTAGATGGCGATGGCTGTaGGGGTCACCCTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: QPGLPAFPERSWVFLSISRWRWL*GSPSLS
Trigger: GGACAAAGAGGGTGACCCGCACAGCCATCGCCATCT...AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCCAAAGGTCTCATCCTaGTCCCCCAAGGGGATTTCT +
Preference number: 4 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQPKVSS*SPKGIS
Trigger: AGAAATCCCCTTGGGGGAGCAGGATGAGACCTTTGG...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp AAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCCTGGCTCCTGTGGGCTCAGTaGCACATCCCCTCAAATAAA +
Preference number: 4 (lower is better)
Translates to: KERSGPFPSLRPCATWPWLLWAQ*HIPSNK
Trigger: TTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAG...CCAGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCTGCATGGGATCTGCCTaGACCAAGCTCACAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LPAFPERSWVFLSISPGGCMGSA*TKLTEV
Trigger: CACCTCTGTGAGCTTGGTCCAGGCAGATCCCATGCA...GCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTGTCCCAGGCTGTGGCTaGCTTCCACTTCTGAATGCC +
Preference number: 4 (lower is better)
Translates to: QPGLPAFPERSWVFLSISVPGCG*LPLLNA
Trigger: GGCATTCAGAAGTGGAAGCCAGCCACAGCCTGGGAC...AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp AGCAAACTGGGCTTTTACTCCTGTGGGCTCAGTGCCACATCCCCTCAAATAAACTCTTCCTCCGTAGCCTaGCAGCCGCTGCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: SKLGFYSCGLSATSPQINSSSVA*QPLPPP
Trigger: TGGAGGCGGCAGCGGCTGCCAGGCTACGGAGGAAGA...GTTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAGTAAAAGCCCAGTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp TATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCCTGGCACTCAGAGGTaGCACAGGTCACTCCATGCT +
Preference number: 4 (lower is better)
Translates to: YFIATTPHNPAFLHFPSGPGTQR*HRSLHA
Trigger: AGCATGGAGTGACCTGTGTCACCTCTGAGTGCCAGG...ACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp CAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTAGCTGGATTAGTGACTaGGCAAATGTGCCCCGTGGA +
Preference number: 4 (lower is better)
Translates to: QQPLTTRPSCISRAVLGFSWISD*ANVPRG
Trigger: TCCACGGGGCACATTTGCTCAGTCACTAATCCAGCT...AAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp AAACTGGGCTTTTACTCCTGTGGGCTCAGTGCCACATCCCCTCAAATAAACATGCCAGTGCCGGTCGCCTaGTCCCACAACCGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KLGFYSCGLSATSPQINMPVPVA*SHNRAE
Trigger: CTCAGCTCGGTTGTGGGAGCAGGCGACCGGCACTGG...CATGTTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAGTAAAAGCCCAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGACAGGACCAAGCGTTTaGGGAACGTCTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: FLHFPSGLGFFSASLPVATGPSV*GTSHRA
Trigger: TGCTCTGTGAGACGTTCCGCAAACGCTTGGTCCTGT...CGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCTGCTCACTCCAGCCCTaGCTGACTTTAAACAAACCC +
Preference number: 4 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSCSLQP*LTLNKP
Trigger: GGGTTTGTTTAAAGTCAGGCAGGGCTGGAGTGAGCA...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGGTGACTGAGCAAATGTaGCCCGTGGAGAGAATGTCA +
Preference number: 4 (lower is better)
Translates to: IATTPHNPAFLHFPSGLGVTEQM*PVERMS
Trigger: TGACATTCTCTCCACGGGGCACATTTGCTCAGTCAC...CCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTAAACTCCTCTCTGCATaGGATCTGCCTGGACCAAGC +
Preference number: 4 (lower is better)
Translates to: QQPLTTRPSCISRAVLGFKLLSA*DLPGPS
Trigger: GCTTGGTCCAGGCAGATCCCATGCAGAGAGGAGTTT...AAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp ACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGACTGTGCACATAGCTTaGGAATCAAAGGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: TSERRERAIGPFPVSQALTVHIA*ESKAWT
Trigger: AGTCCAAGCCTTTGATTCCCAAGCTATGTGCACAGT...CAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp GGAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCCTCTTCCCACTGACACTTaGGATTGTCTCGTGTGCTTA +
Preference number: 4 (lower is better)
Translates to: GKSDRALSRLSGLVQHGPLPTDT*DCLVCL
Trigger: TAAGCACACGAGACAATCCCAAGTGTCAGTGGGAAG...AGGGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp AAAGATGATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACGAAGCTGGGAGGGACTaGACACAGGCAGCCCCATCA +
Preference number: 4 (lower is better)
Translates to: KDDANTPGTRMTPAHAEHEAGRD*TQAAPS
Trigger: TGATGGGGCTGCCTGTGTCCAGTCCCTCCCAGCTTC...GTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATCATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTCCACTCCCTTCTTCATaGCTCCCACTGACATCACCT +
Preference number: 4 (lower is better)
Translates to: QQPLTTRPSCISRAVLGFPLPSS*LPLTSP
Trigger: AGGTGATGTCAGTGGGAGCCATGAAGAAGGGAGTGG...AAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp AAAGATGATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACTGCCCAGGAGGCAGATaGTGCCGAACACCGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KDDANTPGTRMTPAHAEHCPGGR*CRTPKA
Trigger: TGCCTTCGGTGTTCGGCACCATCTGCCTCCTGGGCA...GTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATCATCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATTGCACCAGTGCAGCTTaGACTTCTTCACGACCGCGA +
Preference number: 4 (lower is better)
Translates to: LTTRPSCISRAVLGFSQHCTSAA*TSSRPR
Trigger: TCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCA...ATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp AGCAAACTGGGCTTTTACTCCTGTGGGCTCAGTGCCACATCCCCTCAAATAAACGGCAGATCACCAGGGTaGCCACAGAGGGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SKLGFYSCGLSATSPQINGRSPG*PQRASG
Trigger: TCCGGAAGCCCTCTGTGGCCACCCTGGTGATCTGCC...GTTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAGTAAAAGCCCAGTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATAGAAGACCAGACAGATaGCGATGGCTGTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: LTTRPSCISRAVLGFSQHRRPDR*RWLCGS
Trigger: TGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCT...ATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp TGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTACAAAGCACACAGGCTaGCTCCCTTTGGAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: CISRAVLGFSQHLSRWRVTKHTG*LPLEER
Trigger: TCTCTCCTCCAAAGGGAGGCAGCCTGTGTGCTTTGT...AACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTGAAGATCGAGGTCTCTaGAAAGGCAAACGGACAAAG +
Preference number: 4 (lower is better)
Translates to: CNNPSQPGLPAFPERSWVEDRGL*KGKRTK
Trigger: CTTTGTCCGTTTGCCTTTGCAGAGACCTCGATCTTC...AACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGATGGTCTCCCCAAAGTaGCACACCCCATTGCCCATG +
Preference number: 4 (lower is better)
Translates to: LFHCNNPSQPGLPAFPERMVSPK*HTPLPM
Trigger: CATGGGCAATGGGGTGTGGCACTTTGGGGAGACCAT...CCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCACAGGATCCTCACGTATaGGGCTGTGATGACCACAAA +
Preference number: 4 (lower is better)
Translates to: PHNPAFLHFPSGLGFFSAQDPHV*GCDDHK
Trigger: TTTGTGGTCATCACAGCCGCATACGTGAGGATCCTG...TGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCAGGGGAAGTATCAGGTaGCTTTGCTTTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSRGSIR*LCFLSS
Trigger: AGAGGACAGAAAGCAAAGGCACCTGATACTTCCCCT...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp ATTTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTGGCGTGTTGTGGTaGCCTGACTTGGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IYFIATTPHNPAFLHFPSGGVLW*PDLEVC
Trigger: GCACACCTCCAAGTCAGGGCACCACAACACGCCACC...GCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp TTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTTCCAACTATCTCGCTaGCTATGCTGCCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: FLHFPSGLGFFSASLPVAFQLSR*LCCQHP
Trigger: AGGATGCTGGCAGCATAGCCAGCGAGATAGTTGGAA...CGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp ATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGCCATTGCCCATGAGCTaGTGGATCATGAAGGGCATG +
Preference number: 4 (lower is better)
Translates to: ISRAVLGFSQHLSRWRVVPLPMS*WIMKGM
Trigger: CATGCCCTTCATGATCCACCAGCTCATGGGCAATGG...CACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp TGCTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGGGTCAGTGTCTGGGTTaGGCAGGCGTATGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: CWNAERWDALFFIIHQLGGQCLG*AGVCRS
Trigger: GCTGCGGCATACGCCTGCCCAACCCAGACACTGACC...CCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp TGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCCCGAGCGGTCTTaGGTTTTTCTCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: CNNPSQPGLPAFPERSWVFPERS*VFLSIS
Trigger: AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAA...AACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp ATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGTGGCATAGCCCAAGCTaGTGGCCGCATTGTATAAGT +
Preference number: 4 (lower is better)
Translates to: ISRAVLGFSQHLSRWRVVWHSPS*WPHCIS
Trigger: ACTTATACAATGCGGCCATCAGCTTGGGCTATGCCA...CACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp TATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTTGGGATTGTCTCGTGTaGTTACAGGGGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: YFIATTPHNPAFLHFPSGWDCLV*LQGLLL
Trigger: AAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCA...ACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTACGTTGTTGCACCAGTaGAGCTTGGACTTCTTCACG +
Preference number: 4 (lower is better)
Translates to: QPGLPAFPERSWVFLSISTLLHQ*SLDFFT
Trigger: CGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGT...AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp GGGAAATTGACAGGATGCTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTGGTTGGGCAGGCGTATaGCGCAGCCCACTGCACCTC +
Preference number: 4 (lower is better)
Translates to: GKLTGCWNAERWDALFFIGWAGV*RSPLHL
Trigger: GAGGTGCAGTGGGCTGCGGCATACGCCTGCCCAACC...AATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATTTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCCCACTGAGGACGTCATaGGCTGCAGGATCCTCACGT +
Preference number: 4 (lower is better)
Translates to: IYFIATTPHNPAFLHFPSPLRTS*AAGSSR
Trigger: ACGTGAGGATCCTGCAGCGCATGACGTCCTCAGTGG...GCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp CCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCAAGTATCAGGTGCCTTTaGTTTCTGTCCTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PHNPAFLHFPSGLGFFSASIRCL*FLSSPR
Trigger: ACGAGGAGAGGACAGAAAGCAAAGGCACCTGATACT...TGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp AGCAAACTGGGCTTTTACTCCTGTGGGCTCAGTGCCACATCCCCTCAAATAAACTGGGAATCAAAGGCTTaGACTGCAGCAGGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SKLGFYSCGLSATSPQINWESKA*TAAGLP
Trigger: GGGCAGCCCTGCTGCAGTCCAAGCCTTTGATTCCCA...GTTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAGTAAAAGCCCAGTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CCTGACTTTAAACAAACCCAGTCAGTACCCTTCCACCTCTTGCCTTGGGAAGAACCAGGTATGGGTGGCTaGGCCACATGGCAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PDFKQTQSVPFHLLPWEEPGMGG*ATWQSP
Trigger: TGGACTCTGCCATGTGGCCCAGCCACCCATACCTGG...TTCTTCCCAAGGCAAGAGGTGGAAGGGTACTGACTGGGTTTGTTTAAAGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp CTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTTTCCCGAGCGGTCTTaGGTTTTTCTCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: LHFPSGLGFFSASLPVACFPERS*VFLSIS
Trigger: AGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAA...ACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp GATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATCGCCCCTTCCCTGTGCCCTaGCGGCTTCCAACTATCTCG +
Preference number: 4 (lower is better)
Translates to: DALFFIIHQLGRKATFHRPFPVP*RLPTIS
Trigger: CGAGATAGTTGGAAGCCGTCAGGGCACAGGGAAGGG...GCGATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp TATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTGGATGTAGGTGCTGGTaGACTGACTATTGGCATCCA +
Preference number: 4 (lower is better)
Translates to: YFIATTPHNPAFLHFPSGGCRCW*TDYWHP
Trigger: TGGATGCCAATAGTCAGTTCACCAGCACCTACATCC...ACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp ATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGAAAACTGGTACAGGGTaGACCAGTAGAGGTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ISRAVLGFSQHLSRWRVVKTGTG*TSRGQC
Trigger: ACACTGACCTCTACTGGTTCACCCTGTACCAGTTTT...CACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TCTTGCTCAGCTTCTGTTCTATCCAAAGGTCTCATCCTGCTCCCCCAAGGGGATTCTCTGCATGGGATCTaGCTGGACCAAGCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SCSASVLSKGLILLPQGDSLHGI*LDQAHR
Trigger: TCTGTGAGCTTGGTCCAGGCAGATCCCATGCAGAGA...ATCCCCTTGGGGGAGCAGGATGAGACCTTTGGATAGAACAGAAGCTGAGCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp AAAGATGATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACCTATCTCGCTGGCTATaGTGCCAGCATCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: KDDANTPGTRMTPAHAEHLSRWL*CQHPAE
Trigger: TTCTGCAGGATGCTGGCAGCATAGCCAGCGAGATAG...GTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATCATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGAGGGGAAGTATCAGGTaGCTTTGCTTTCTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISRAVLGFSQHLSRWRVVRGSIR*LCFLSS
Trigger: AGAGGACAGAAAGCAAAGGCACCTGATACTTCCCCT...CACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR TCA 90 bp CTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGGCTGCTTGCCTTGCGTaGAGATCGAGGTCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LERREMGCFIFHYPPAWEAACLA*RSRSLQ
Trigger: TTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGC...CTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATGCTTCCACTTCTGAATaGCTGCAGAGCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHASTSE*LQSPRA
Trigger: GGCCCTGGGGCTCTGCAGGCATTCAGAAGTGGAAGC...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGACATTCGGAGGCAGATaGACATTAACCTCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: ISRAVLGFSQHLSRWRVVTFGGR*TLTSSV
Trigger: GACTGAAGAGGTTAATGTGCATCTGCCTCCGAATGT...CACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATGGCCATCAGAGGTGTTaGTGGCGTTGGGACCAGTGG +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHGHQRC*WRWDQW
Trigger: CCACTGGTCCCAACGCCAGCAACACCTCTGATGGCC...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATTTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCACAGGACCAAGCGTTTaGGGAACGTCTCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: IYFIATTPHNPAFLHFPSTGPSV*GTSHRA
Trigger: TGCTCTGTGAGACGTTCCGCAAACGCTTGGTCCTGT...GCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp AAAGATGATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACAATGACCCCTGCACATaGAGAACACACGGACACTCA +
Preference number: 4 (lower is better)
Translates to: KDDANTPGTRMTPAHAEHNDPCT*RTHGHS
Trigger: TGAGTGTCCGTGTGTTCTGCATGTGCAGGGGTCATT...GTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp GGGAAATTGACAGGATGCTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTCCCCTATTCCAGGTATaGGTGGCTGGGCCACATGGC +
Preference number: 4 (lower is better)
Translates to: GKLTGCWNAERWDALFFIPLFQV*VAGPHG
Trigger: GCCATGTGGCCCAGCCACCCATACCTGGAATAGGGG...AATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp TGTTCTATCCAAAGGTCTCATCCTGCTCCCCCAAGGGGATTTCTGATATCTGAAGTCCCAGGCTGTGGCTaGCTTCCACTTCTGAATGCC +
Preference number: 4 (lower is better)
Translates to: CSIQRSHPAPPRGFLISEVPGCG*LPLLNA
Trigger: GGCATTCAGAAGTGGAAGCCAGCCACAGCCTGGGAC...TTCAGATATCAGAAATCCCCTTGGGGGAGCAGGATGAGACCTTTGGATAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp GCTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAACTTCGTGGAAGAGATaGGGTGGACAGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: AGTPRDGMLYFSLSTSLGTSWKR*GGQWPG
Trigger: ACCTGGCCACTGTCCACCCCATCTCTTCCACGAAGT...TCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp AAACTGGGCTTTTACTCCTGTGGGCTCAGTGCCACATCCCCTCAAATAAACATGAGAAGACCAGACAGATaGCGATGGCTGTGCGGGTCA +
Preference number: 4 (lower is better)
Translates to: KLGFYSCGLSATSPQINMRRPDR*RWLCGS
Trigger: TGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCT...CATGTTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAGTAAAAGCCCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATCTCCTGGGAAGGGGATaGGTCTGGCATACAGCCACA +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHLLGRG*VWHTAT
Trigger: TGTGGCTGTATGCCAGACTCATCCCCTTCCCAGGAG...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CCGAGAGATGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCATGTGCTTACAGGGGCTaGTGCTTGCCTTGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: PRDGMLYFSLSTSLGERPCAYRG*CLPCVK
Trigger: CTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACA...TGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATCGCACCACTGAGGACGTCATaGGCTGCAGGATCCTCACGT +
Preference number: 4 (lower is better)
Translates to: MLYFSLSTSLGERPPSIAPLRTS*AAGSSR
Trigger: ACGTGAGGATCCTGCAGCGCATGACGTCCTCAGTGG...TGCGATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATCGCAAGATGGCGATGGCTGTaGGGGTCACCCTCTTTGTCC +
Preference number: 4 (lower is better)
Translates to: MLYFSLSTSLGERPPSIARWRWL*GSPSLS
Trigger: GGACAAAGAGGGTGACCCGCACAGCCATCGCCATCT...TGCGATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TCTTGCTCAGCTTCTGTTCTATCCAAAGGTCTCATCCTGCTCCCCCAAGGGGATAGTATCAGGTGCCTTTaGTTTCTGTCCTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SCSASVLSKGLILLPQGDSIRCL*FLSSPR
Trigger: ACGAGGAGAGGACAGAAAGCAAAGGCACCTGATACT...ATCCCCTTGGGGGAGCAGGATGAGACCTTTGGATAGAACAGAAGCTGAGCAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp GGGAAATTGACAGGATGCTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTAGCGGTCAATGGCCATaGCGGTCAGGATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: GKLTGCWNAERWDALFFISGQWP*RSGCRC
Trigger: GCACCTACATCCTGACCGCCATGGCCATTGACCGCT...AATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATGTAGAGGTCAGTGTCTaGGTTGGGCAGGCGTATGCC +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHVEVSV*VGQAYA
Trigger: GGCATACGCCTGCCCAACCCAGACACTGACCTCTAC...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp GCTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAAGCAAATGTGCCCCGTaGAGAGAATGTCACCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGTPRDGMLYFSLSTSLGSKCAP*RECHQS
Trigger: GCTCTGGTGACATTCTCTCCACGGGGCACATTTGCT...TCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp GATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATCGCGAGCAAAAGGGAAATTaGCAGGATGCTGGAACGCCG +
Preference number: 4 (lower is better)
Translates to: DALFFIIHQLGRKATFHREQKGN*QDAGTP
Trigger: CGGCGTTCCAGCATCCTGTCAATTTCCCTTTTGCTC...GCGATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATTCTCGCTGGCTATGCTaGCAGCATCCTGCAGAAGCT +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHSRWLC*QHPAEA
Trigger: AGCTTCTGCAGGATGCTGGCAGCATAGCCAGCGAGA...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATTGTCGGGGACGTTGTTaGACCAGTGCAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHCRGRC*TSAAWT
Trigger: AGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACA...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCAATGTATTTATTTCATTaGAACAACCCCTCACAACCC +
Preference number: 4 (lower is better)
Translates to: PHNPAFLHFPSGLGFFSAMYLFH*NNPSQP
Trigger: GGGTTGTGAGGGGTTGTTGCAATGAAATAAATACAT...TGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CCA 90 bp GATATAGTGCAACCGGTTATCCAAACCAACATGTTCTCTTGCTCAGCTTCTGTTCAGGACCTCGGGGACTaGAAGGGGACAAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: DIVQPVIQTNMFSCSASVQDLGD*KGTNSS
Trigger: AGAGGAGTTTGTCCCCTTCCAGTCCCCGAGGTCCTG...AACAGAAGCTGAGCAAGAGAACATGTTGGTTTGGATAACCGGTTGCACTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp ATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATCGCATGCACCAGTGCAGCTTaGACTTCTTCACGACCGCGA +
Preference number: 4 (lower is better)
Translates to: MLYFSLSTSLGERPPSIACTSAA*TSSRPR
Trigger: TCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCA...TGCGATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATGACCTCCTAGCAAACTaGGCTTTTACTCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHDLLAN*AFTPVG
Trigger: GCCCACAGGAGTAAAAGCCCAGTTTGCTAGGAGGTC...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATACGTTGTTGCACCAGTaGAGCTTGGACTTCTTCACG +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHTLLHQ*SLDFFT
Trigger: CGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGT...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp CCTGACTTTAAACAAACCCAGTCAGTACCCTTCCACCTCTTGCCTTGGGAAGAATACCCTTCCACCTCTTaGCTTGGGAAGAAGACATTT +
Preference number: 4 (lower is better)
Translates to: PDFKQTQSVPFHLLPWEEYPSTS*LGKKTF
Trigger: AAATGTCTTCTTCCCAAGGCAAGAGGTGGAAGGGTA...TTCTTCCCAAGGCAAGAGGTGGAAGGGTACTGACTGGGTTTGTTTAAAGTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp TTGGGAAGAAGACATTTGAGAGCTCACAGATATAGTGCAACCGGTTATCCAAACGGGAAATTGACAGGATaGTGGAACGCCGAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LGRRHLRAHRYSATGYPNGKLTG*WNAERW
Trigger: CCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCC...GTTTGGATAACCGGTTGCACTATATCTGTGAGCTCTCAAATGTCTTCTTCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CAA 72 bp AGAGATGGGATGCTTTATTTTTCATTATCCACCAGCTaGGGAGAAAGGCCACCTTCCATCGCACCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: RDGMLYFSLSTS*GERPPSIAPVR
Trigger: TCTCACTGGTGCGATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR TCA 90 bp CCTGACTTTAAACAAACCCAGTCAGTACCCTTCCACCTCTTGCCTTGGGAAGAATGGGAAGAAGACATTTaGGAGCTCACAGATATAGTG +
Preference number: 4 (lower is better)
Translates to: PDFKQTQSVPFHLLPWEEWEEDI*ELTDIV
Trigger: CACTATATCTGTGAGCTCTCAAATGTCTTCTTCCCA...TTCTTCCCAAGGCAAGAGGTGGAAGGGTACTGACTGGGTTTGTTTAAAGTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CAA 72 bp TCAAATAAACATGCATCCTCTAGAGCAAAAGGGAAATaGACAGGATGCTGGAACGCCGAGAGATGGGATGCT +
Preference number: 4 (lower is better)
Translates to: SNKHASSRAKGK*TGCWNAERWDA
Trigger: AGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCCTTTTGCTCTAGAGGATGCATGTTTATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATTTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCATGTATTTATTTCATTaGAACAACCCCTCACAACCC +
Preference number: 4 (lower is better)
Translates to: IYFIATTPHNPAFLHFPSMYLFH*NNPSQP
Trigger: GGGTTGTGAGGGGTTGTTGCAATGAAATAAATACAT...GCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR GCA 90 bp TGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATACCAACATGTTCTCTTaGTCAGCTTCTGTTCTATCC +
Preference number: 4 (lower is better)
Translates to: WDALFFIIHQLGRKATFHTNMFS*SASVLS
Trigger: GGATAGAACAGAAGCTGAGCAAGAGAACATGTTGGT...ATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
3UTR CAA 72 bp TATAGTGCAACCGGTTATCCAAACCAACATGTTCTCTaGCTCAGCTTCTGTTCTATCCAAAGGTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: YSATGYPNQHVL*LSFCSIQRSHP
Trigger: AGGATGAGACCTTTGGATAGAACAGAAGCTGAGCAAGAGAACATGTTGGTTTGGATAACCGGTTGCACTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR GCA 90 bp ATGGGATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCACGCCGAGAGATGGGATaGTTTATTTTTCATTATCCA +
Preference number: 4 (lower is better)
Translates to: MGCFIFHYPPAWEKGHLPRREMG*FIFHYP
Trigger: TGGATAATGAAAAATAAAGCATCCCATCTCTCGGCG...TGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATCCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp TGGCGATGGCTGTGCGGGTCACCCTCTTTGTCCGCAGCCGGATGCTaGGCTGGGAGGCGGGGGCCACTGAGGACGTCATGCGCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: WRWLCGSPSLSAAGC*AGRRGPLRTSCAAG
Trigger: TCCTGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 90 bp AGATGGCGATGGCTGTGCGGGTCACCCTCTTTGTCCGCAGCCGGATaGTGCGCTGGGAGGCGGGGGCCACTGAGGACGTCATGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: RWRWLCGSPSLSAAG*CAGRRGPLRTSCAA
Trigger: TGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CCA 90 bp ATGGCTGTGCGGGTCACCCTCTTTGTCCGCAGCCGGATGCTGCGCTaGGAGGCGGGGGCCACTGAGGACGTCATGCGCTGCAGGATCCTC +
Preference number: 5 (lower is better)
Translates to: MAVRVTLFVRSRMLR*EAGATEDVMRCRIL
Trigger: GAGGATCCTGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS TCA 90 bp CCTCTTTGTCCGCAGCCGGATGCTGCGCTGGGAGGCGGGGGCCACTaGGGACGTCATGCGCTGCAGGATCCTCACGTATGCGGCTGTGAT +
Preference number: 5 (lower is better)
Translates to: PLCPQPDAALGGGGH*GRHALQDPHVCGCD
Trigger: ATCACAGCCGCATACGTGAGGATCCTGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 90 bp CGGATGCTGCGCTGGGAGGCGGGGGCCACTGAGGACGTCATGCGCTaGAGGATCCTCACGTATGCGGCTGTGATGACCACAAAAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RMLRWEAGATEDVMR*RILTYAAVMTTKGR
Trigger: CCTGCCTTTTGTGGTCATCACAGCCGCATACGTGAGGATCCTGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS-3UTR CAA 90 bp TTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGCCAGCGCCTGCCACCTaGTCCCGGAGCGCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: FLHFPSGLGFFSASLPVAPAPAT*SRSASP
Trigger: GGGGCTTGCGCTCCGGGACAAGGTGGCAGGCGCTGG...CGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS GCA 90 bp AGGGTGCCCAGCACACAAAGAAGACCAGACAGATGGCGATGGCTGTaGGGGTCACCCTCTTTGTCCGCAGCCGGATGCTGCGCTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RVPSTQRRPDRWRWL*GSPSLSAAGCCAGR
Trigger: CCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCTTTGTGTGCTGGGCACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 90 bp GTCAGCCGTCTGAGCGTTGCTGACAGCGCGAAGCTGCCCCTGGGCTaGAGGCTTCACCGACAGGACCAAGCGTTTGCGGAACGTCTCACA +
Preference number: 5 (lower is better)
Translates to: VSRLSVADSAKLPLG*RLHRQDQAFAERLT
Trigger: TGTGAGACGTTCCGCAAACGCTTGGTCCTGTCGGTGAAGCCTGCAGCCCAGGGGCAGCTTCGCGCTGTCAGCAACGCTCAGACGGCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS-3UTR CAA 90 bp CGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGGCGCAAGCCCCGCAGTaGGGAAGGGGGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RPSCISRAVLGFSQHLSRAQAPQ*GRGSSS
Trigger: GGAGGAAGACCCCCTTCCCAACTGCGGGGCTTGCGC...CCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp TGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTGCGCAAGCCCCGCAGTaGGGAAGGGGGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: CNNPSQPGLPAFPERSWVAQAPQ*GRGSSS
Trigger: GGAGGAAGACCCCCTTCCCAACTGCGGGGCTTGCGC...AACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp CGGGAAAGAGCGATCGGGCCCTTTCCCGTCTCTCAGGCCTTGTGCAACATGGCCGGGCCATCAGAGGTGTaGCTGGCGTTGGGACCAGTG +
Preference number: 5 (lower is better)
Translates to: RERAIGPFPVSQALCNMAGPSEV*LALGPV
Trigger: CACTGGTCCCAACGCCAGCAACACCTCTGATGGCCC...GGCCATGTTGCACAAGGCCTGAGAGACGGGAAAGGGCCCGATCGCTCTTTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS TCA 90 bp TGCCTTTGCTTTCTGTCCTCTCCTCGTCAGCCGTCTGAGCGTTGCTaGCAGCGCGAAGCTGCCCCTGGGCTGCAGGCTTCACCGACAGGA +
Preference number: 5 (lower is better)
Translates to: CLCFLSSPRQPSERC*QREAAPGLQASPTG
Trigger: TCCTGTCGGTGAAGCCTGCAGCCCAGGGGCAGCTTCGCGCTGTCAGCAACGCTCAGACGGCTGACGAGGAGAGGACAGAAAGCAAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 90 bp GTAGAGGTCAGTGTCTGGGTTGGGCAGGCGTATGCCGCAGCCCACTaGACCTCCTGGGAAGGGGATGAGTCTGGCATACAGCCACACAGG +
Preference number: 5 (lower is better)
Translates to: VEVSVWVGQAYAAAH*TSWEGDESGIQPHR
Trigger: CCTGTGTGGCTGTATGCCAGACTCATCCCCTTCCCAGGAGGTGCAGTGGGCTGCGGCATACGCCTGCCCAACCCAGACACTGACCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000498400.1
CDS CCA 90 bp CCCTCGGCCCCTTCCCTGTGCCCTGACGGCTTCCAACTATCTCGCTaGCTATGCTGCCAGCATCCTGCAGAAGCTGAGTCGTCAGCTGCT +
Preference number: 5 (lower is better)
Translates to: PSAPSLCPDGFQLSR*LCCQHPAEAESSAA
Trigger: AGCAGCTGACGACTCAGCTTCTGCAGGATGCTGGCAGCATAGCCAGCGAGATAGTTGGAAGCCGTCAGGGCACAGGGAAGGGGCCGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCTGCGGGTCACCCTCTTaGTCCGCAGCCGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSCGSPS*SAAGCC
Trigger: GCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCA...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp CGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGCGGGTCACCCTCTTaGTCCGCAGCCGGATGCTGC +
Preference number: 5 (lower is better)
Translates to: RPSCISRAVLGFSQHLSRCGSPS*SAAGCC
Trigger: GCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCA...CCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp ACCTTCCATCGCACCAGTGAGAGGCGGGAAAGAGCGATCGGGCCCTTTCCCGTCATGTCGGGGACGTTGTaGCACCAGTGCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: TFHRTSERRERAIGPFPVMSGTL*HQCSLD
Trigger: GTCCAAGCTGCACTGGTGCAACAACGTCCCCGACAT...GACGGGAAAGGGCCCGATCGCTCTTTCCCGCCTCTCACTGGTGCGATGGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp CGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTCTCCCGGTGGCGTGTaGTGGTGCCCTGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: RPSCISRAVLGFSQHLSRSPGGV*WCPDLE
Trigger: CTCCAAGTCAGGGCACCACAACACGCCACCGGGAGA...CCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp CCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCCCCGTCTCTCAGGCCTaGTGCAACATGGCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PGLPAFPERSWVFLSISPPVSQA*CNMALA
Trigger: AGCCAGGGCCATGTTGCACAAGGCCTGAGAGACGGG...GGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS TCA 90 bp GAAGCTGAGTCGTCAGCTGCTGAACCCTTGCCTGGCACTCAGAGGTaGCACAGGTCACTCCATGCTGGCAATAGCCAGGACCTCGGGGAC +
Preference number: 5 (lower is better)
Translates to: EAESSAAEPLPGTQR*HRSLHAGNSQDLGD
Trigger: GTCCCCGAGGTCCTGGCTATTGCCAGCATGGAGTGACCTGTGTCACCTCTGAGTGCCAGGCAAGGGTTCAGCAGCTGACGACTCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS TCA 90 bp AAGTATCAGGTGCCTTTGCTTTCTGTCCTCTCCTCGTCAGCCGTCTaGGCGTTGCTGACAGCGCGAAGCTGCCCCTGGGCTGCAGGCTTC +
Preference number: 5 (lower is better)
Translates to: KYQVPLLSVLSSSAV*ALLTARSCPWAAGF
Trigger: GAAGCCTGCAGCCCAGGGGCAGCTTCGCGCTGTCAGCAACGCTCAGACGGCTGACGAGGAGAGGACAGAAAGCAAAGGCACCTGATACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CCA 90 bp CGGACAAAGCACACAGGCTGCCTCCCTTTGGAGGAGAGAGCAGCTTaGCTTAGCCCCTATTCCAGGTATGGGTGGCTGGGCCACATGGCA +
Preference number: 5 (lower is better)
Translates to: RTKHTGCLPLEERAA*LSPYSRYGWLGHMA
Trigger: TGCCATGTGGCCCAGCCACCCATACCTGGAATAGGGGCTAAGCCAAGCTGCTCTCTCCTCCAAAGGGAGGCAGCCTGTGTGCTTTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CCA 90 bp TTCGGAGGCAGATGCACATTAACCTCTTCAGTCCCAGGCTGTGGCTaGCTTCCACTTCTGAATGCCTGCAGAGCCCCAGGGCCCTGGGGA +
Preference number: 5 (lower is better)
Translates to: FGGRCTLTSSVPGCG*LPLLNACRAPGPWG
Trigger: TCCCCAGGGCCCTGGGGCTCTGCAGGCATTCAGAAGTGGAAGCCAGCCACAGCCTGGGACTGAAGAGGTTAATGTGCATCTGCCTCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS CCA 90 bp GGCCAGGAAAAACTGGTACAGGGTGAACCAGTAGAGGTCAGTGTCTaGGTTGGGCAGGCGTATGCCGCAGCCCACTGCACCTCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GQEKLVQGEPVEVSV*VGQAYAAAHCTSWE
Trigger: TTCCCAGGAGGTGCAGTGGGCTGCGGCATACGCCTGCCCAACCCAGACACTGACCTCTACTGGTTCACCCTGTACCAGTTTTTCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000498400.1
CDS CCA 90 bp CATAGTAGGGTGCCCAGCACACAAAGAAGACCAGACAGATGGCGATaGCTGTGCGGGTCACCCTCTTTGTCCGCAGCCGGATGCTGCGCT +
Preference number: 5 (lower is better)
Translates to: HSRVPSTQRRPDRWR*LCGSPSLSAAGCCA
Trigger: AGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCTTTGTGTGCTGGGCACCCTACTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS-3UTR CAA 90 bp CGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGACAGGCTGCCTCCCTTaGGAGGAGAGAGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: RPSCISRAVLGFSQHLSRTGCLP*EERAAW
Trigger: CCAAGCTGCTCTCTCCTCCAAAGGGAGGCAGCCTGT...CCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp ATTTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCCCAGCGCCTGCCACCTaGTCCCGGAGCGCAAGCCCC +
Preference number: 5 (lower is better)
Translates to: IYFIATTPHNPAFLHFPSPAPAT*SRSASP
Trigger: GGGGCTTGCGCTCCGGGACAAGGTGGCAGGCGCTGG...GCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp CCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGGGGCCATCAGAGGTGTaGCTGGCGTTGGGACCAGTG +
Preference number: 5 (lower is better)
Translates to: PSCISRAVLGFSQHLSRWGPSEV*LALGPV
Trigger: CACTGGTCCCAACGCCAGCAACACCTCTGATGGCCC...CCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp TTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTCTCCCGGTGGCGTGTaGTGGTGCCCTGACTTGGAG +
Preference number: 5 (lower is better)
Translates to: FLHFPSGLGFFSASLPVASPGGV*WCPDLE
Trigger: CTCCAAGTCAGGGCACCACAACACGCCACCGGGAGA...CGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS GCA 90 bp AGCATCTCTCCCGGTGGCGTGTTGTGGTGCCCTGACTTGGAGGTGTaGAGGGTGGCAGGGGAAGTATCAGGTGCCTTTGCTTTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: SISPGGVLWCPDLEV*RVAGEVSGAFAFCP
Trigger: AGGACAGAAAGCAAAGGCACCTGATACTTCCCCTGCCACCCTGCACACCTCCAAGTCAGGGCACCACAACACGCCACCGGGAGAGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CCA 90 bp GTAGCACATAGTAGGGTGCCCAGCACACAAAGAAGACCAGACAGATaGCGATGGCTGTGCGGGTCACCCTCTTTGTCCGCAGCCGGATGC +
Preference number: 5 (lower is better)
Translates to: VAHSRVPSTQRRPDR*RWLCGSPSLSAAGC
Trigger: GCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCTTTGTGTGCTGGGCACCCTACTATGTGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS-3UTR CAA 90 bp CCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGTTGGGAATCAAAGGCTaGGACTGCAGCAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: PAFLHFPSGLGFFSASLPLGIKG*DCSRAA
Trigger: GGCAGCCCTGCTGCAGTCCAAGCCTTTGATTCCCAA...CGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp TTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGGGGCTGCTGCTTGCCTaGCGTGAAGATCGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: FLHFPSGLGFFSASLPVAGLLLA*REDRGL
Trigger: GAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCC...CGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp CGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTTGCACCAGTGCAGCTaGGACTTCTTCACGACCGCG +
Preference number: 5 (lower is better)
Translates to: RPSCISRAVLGFSQHLSRLHQCS*DFFTTA
Trigger: CGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAA...CCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp CCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGATGTCGGGGACGTTGTaGCACCAGTGCAGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: PAFLHFPSGLGFFSASLPMSGTL*HQCSLD
Trigger: GTCCAAGCTGCACTGGTGCAACAACGTCCCCGACAT...CGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS TCA 90 bp GACTGGACACAGGCAGCCCCATCAGGAAAGGGATCTCCTTCCCACTaGCACTTGGGATTGTCTCGTGTGCTTACAGGGGCTGCTGCTTGC +
Preference number: 5 (lower is better)
Translates to: DWTQAAPSGKGSPSH*HLGLSRVLTGAAAC
Trigger: GCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGTCAGTGGGAAGGAGATCCCTTTCCTGATGGGGCTGCCTGTGTCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp TTGGCATCCATGGCCGTGATGAGGGTGCACATGGTCTCCCCAAAGTaGCACACCCCATTGCCCATGAGCTGGTGGATCATGAAGGGCATG +
Preference number: 5 (lower is better)
Translates to: LASMAVMRVHMVSPK*HTPLPMSWWIMKGM
Trigger: CATGCCCTTCATGATCCACCAGCTCATGGGCAATGGGGTGTGGCACTTTGGGGAGACCATGTGCACCCTCATCACGGCCATGGATGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000465662.1
ENST00000498400.1
CDS CCA 90 bp CACAGGCAGCCCCATCAGGAAAGGGATCTCCTTCCCACTGACACTTaGGATTGTCTCGTGTGCTTACAGGGGCTGCTGCTTGCCTTGCGT +
Preference number: 5 (lower is better)
Translates to: HRQPHQERDLLPTDT*DCLVCLQGLLLALR
Trigger: ACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGTCAGTGGGAAGGAGATCCCTTTCCTGATGGGGCTGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCAAGATGTCGGGGACGTaGTTGCACCAGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSKMSGT*LHQCSL
Trigger: CAAGCTGCACTGGTGCAACAACGTCCCCGACATCTT...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp GATGCCAACACACCGGGCACTAGAATGACCCCTGCACATGCAGAACACACGGACAAGTGCCACACCCCATaGCCCATGAGCTGGTGGATC +
Preference number: 5 (lower is better)
Translates to: DANTPGTRMTPAHAEHTDKCHTP*PMSWWI
Trigger: GATCCACCAGCTCATGGGCAATGGGGTGTGGCACTT...GTCCGTGTGTTCTGCATGTGCAGGGGTCATTCTAGTGCCCGGTGTGTTGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp TGCTTACAGGGGCTGCTGCTTGCCTTGCGTGAAGATCGAGGTCTCTaGAAAGGCAAACGGACAAAGCACACAGGCTGCCTCCCTTTGGAG +
Preference number: 5 (lower is better)
Translates to: CLQGLLLALREDRGL*KGKRTKHTGCLPLE
Trigger: CTCCAAAGGGAGGCAGCCTGTGTGCTTTGTCCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp CCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCTCATTATCCACCAGCTaGGGAGAAAGGCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: PSQPGLPAFPERSWVFLSSLSTS*GERPPS
Trigger: GGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGA...GCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp GAAGATCGAGGTCTCTGCAAAGGCAAACGGACAAAGCACACAGGCTaGCTCCCTTTGGAGGAGAGAGCAGCTTGGCTTAGCCCCTATTCC +
Preference number: 5 (lower is better)
Translates to: EDRGLCKGKRTKHTG*LPLEERAAWLSPYS
Trigger: GGAATAGGGGCTAAGCCAAGCTGCTCTCTCCTCCAAAGGGAGGCAGCCTGTGTGCTTTGTCCGTTTGCCTTTGCAGAGACCTCGATCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp CAGGAAAGGGATCTCCTTCCCACTGACACTTGGGATTGTCTCGTGTaGTTACAGGGGCTGCTGCTTGCCTTGCGTGAAGATCGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: QERDLLPTDTWDCLV*LQGLLLALREDRGL
Trigger: GAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGTCAGTGGGAAGGAGATCCCTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp ACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCAAGATGTCGGGGACGTaGTTGCACCAGTGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: TTRPSCISRAVLGFSQHLKMSGT*LHQCSL
Trigger: CAAGCTGCACTGGTGCAACAACGTCCCCGACATCTT...GAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp TTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGGACAGGACCAAGCGTTaGCGGAACGTCTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: LFHCNNPSQPGLPAFPERDRTKR*RNVSQS
Trigger: GCTCTGTGAGACGTTCCGCAAACGCTTGGTCCTGTC...CCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp ATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGAAGTATCAGGTGCCTTaGCTTTCTGTCCTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: IATTPHNPAFLHFPSGLGKYQVP*LSVLSS
Trigger: CGAGGAGAGGACAGAAAGCAAAGGCACCTGATACTT...CCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp CCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGATTTCCCGAGCGGTCTaGGGTTTTTCTCAGCATCTC +
Preference number: 5 (lower is better)
Translates to: PAFLHFPSGLGFFSASLPISRAV*GFSQHL
Trigger: GAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT...CGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp GCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGCCACCCCAGGTCTCCTaGTTTTCAGTAAGCAGACCT +
Preference number: 5 (lower is better)
Translates to: AFLHFPSGLGFFSASLPVPPQVS*FSVSRP
Trigger: AGGTCTGCTTACTGAAAACAAGGAGACCTGGGGTGG...CACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS TCA 90 bp TTGGGATTGTCTCGTGTGCTTACAGGGGCTGCTGCTTGCCTTGCGTaGAGATCGAGGTCTCTGCAAAGGCAAACGGACAAAGCACACAGG +
Preference number: 5 (lower is better)
Translates to: LGLSRVLTGAAACLA*RSRSLQRQTDKAHR
Trigger: CCTGTGTGCTTTGTCCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp TTCCCACTGACACTTGGGATTGTCTCGTGTGCTTACAGGGGCTGCTaGTTGCCTTGCGTGAAGATCGAGGTCTCTGCAAAGGCAAACGGA +
Preference number: 5 (lower is better)
Translates to: FPLTLGIVSCAYRGC*LPCVKIEVSAKANG
Trigger: TCCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGTCAGTGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp TCCTTCCCACTGACACTTGGGATTGTCTCGTGTGCTTACAGGGGCTaGTGCTTGCCTTGCGTGAAGATCGAGGTCTCTGCAAAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: SFPLTLGIVSCAYRG*CLPCVKIEVSAKAN
Trigger: GTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGTCAGTGGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp ACCGAGAGGTTGATGATGAAGATGTCGGGGACGTTGTTGCACCAGTaGAGCTTGGACTTCTTCACGACCGCGAAGATGACCGTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: TERLMMKMSGTLLHQ*SLDFFTTAKMTVEF
Trigger: GAACTCCACGGTCATCTTCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCATCATCAACCTCTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000465662.1
ENST00000498400.1
CDS-3UTR CAA 90 bp CCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGAACTGTGCACATAGCTaGGGAATCAAAGGCTTGGAC +
Preference number: 5 (lower is better)
Translates to: PLTTRPSCISRAVLGFSQNCAHS*GIKGLD
Trigger: GTCCAAGCCTTTGATTCCCAAGCTATGTGCACAGTT...CTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp TTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGGTCTACTACCGAGAGGTaGATGATGAAGATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: FPERSWVFLSISPGGVLWSTTER*MMKMSG
Trigger: CCCCGACATCTTCATCATCAACCTCTCGGTAGTAGA...CCACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp AAACTGGGCTTTTACTCCTGTGGGCTCAGTGCCACATCCCCTCAAATAAACATGAGGTCAGTGTCTGGGTaGGGCAGGCGTATGCCGCAG +
Preference number: 5 (lower is better)
Translates to: KLGFYSCGLSATSPQINMRSVSG*GRRMPQ
Trigger: CTGCGGCATACGCCTGCCCAACCCAGACACTGACCT...CATGTTTATTTGAGGGGATGTGGCACTGAGCCCACAGGAGTAAAAGCCCAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp ACACTTGGGATTGTCTCGTGTGCTTACAGGGGCTGCTGCTTGCCTTaGGTGAAGATCGAGGTCTCTGCAAAGGCAAACGGACAAAGCACA +
Preference number: 5 (lower is better)
Translates to: TLGIVSCAYRGCCLP*VKIEVSAKANGQST
Trigger: TGTGCTTTGTCCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 90 bp AACGAGAGGTTGATGATGAAGATGTCGGGGACGTTGTTGCACCAGTaGAGCTTGGACTTCTTCACGACCGCGAAGATGACCGTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: NERLMMKMSGTLLHQ*SLDFFTTAKMTVEF
Trigger: GAACTCCACGGTCATCTTCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCATCATCAACCTCTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381433.2
CDS-3UTR CAA 90 bp TTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGTGGCGTGTTGTGGCTTCCACCTCTTGCCTaGGGAAGAAGACATTTGAGA +
Preference number: 5 (lower is better)
Translates to: FPERSWVFLSISPGGVLWLPPLA*GRRHLR
Trigger: TCTCAAATGTCTTCTTCCCAAGGCAAGAGGTGGAAG...CCACAACACGCCACCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp CGGCCTTCCTGCATTTCCCGAGCGGTCTTGGGTTTTTCTCAGCATCTCTCCCGGAACCAACATGTTCTCTaGCTCAGCTTCTGTTCTATC +
Preference number: 5 (lower is better)
Translates to: RPSCISRAVLGFSQHLSRNQHVL*LSFCSI
Trigger: GATAGAACAGAAGCTGAGCAAGAGAACATGTTGGTT...CCGGGAGAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAATGCAGGAAGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp GATGCTTTATTTTTCATTATCCACCAGCTTGGGAGAAAGGCCACCTTCCATCGCTTGCACCAGTGCAGCTaGGACTTCTTCACGACCGCG +
Preference number: 5 (lower is better)
Translates to: DALFFIIHQLGRKATFHRLHQCS*DFFTTA
Trigger: CGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAA...GCGATGGAAGGTGGCCTTTCTCCCAAGCTGGTGGATAATGAAAAATAAAGCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp TTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCGGAGGAAAAACGAGAGGTaGATGATGAAGATGTCGGGG +
Preference number: 5 (lower is better)
Translates to: LFHCNNPSQPGLPAFPERRKNER*MMKMSG
Trigger: CCCCGACATCTTCATCATCAACCTCTCGTTTTTCCT...CCGCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381433.2
CDS-3UTR CAA 90 bp GGGAAATTGACAGGATGCTGGAACGCCGAGAGATGGGATGCTTTATTTTTCATTGACAGGACCAAGCGTTaGCGGAACGTCTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: GKLTGCWNAERWDALFFIDRTKR*RNVSQS
Trigger: GCTCTGTGAGACGTTCCGCAAACGCTTGGTCCTGTC...AATGAAAAATAAAGCATCCCATCTCTCGGCGTTCCAGCATCCTGTCAATTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp ATTTATTTCATTGCAACAACCCCTCACAACCCGGCCTTCCTGCATTTCCCGAGCAAGTATCAGGTGCCTTaGCTTTCTGTCCTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: IYFIATTPHNPAFLHFPSKYQVP*LSVLSS
Trigger: CGAGGAGAGGACAGAAAGCAAAGGCACCTGATACTT...GCTCGGGAAATGCAGGAAGGCCGGGTTGTGAGGGGTTGTTGCAATGAAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS-3UTR CAA 90 bp TTGGGAAGAAGACATTTGAGAGCTCACAGATATAGTGCAACCGGTTATCCAAACTACAGGGGCTGCTGCTaGCCTTGCGTGAAGATCGAG +
Preference number: 5 (lower is better)
Translates to: LGRRHLRAHRYSATGYPNYRGCC*PCVKIE
Trigger: CTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTA...GTTTGGATAACCGGTTGCACTATATCTGTGAGCTCTCAAATGTCTTCTTCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS-3UTR CAA 90 bp CCTGACTTTAAACAAACCCAGTCAGTACCCTTCCACCTCTTGCCTTGGGAAGAAATTTCCCGAGCGGTCTaGGGTTTTTCTCAGCATCTC +
Preference number: 5 (lower is better)
Translates to: PDFKQTQSVPFHLLPWEEISRAV*GFSQHL
Trigger: GAGATGCTGAGAAAAACCCAAGACCGCTCGGGAAAT...TTCTTCCCAAGGCAAGAGGTGGAAGGGTACTGACTGGGTTTGTTTAAAGTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CAA 72 bp CCACGCAGGCTGCGGCAGCCTCCAGCGCCTGCCACCTaGTCCCGGAGCGCAAGCCCCGCAGTTGGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: PRRLRQPPAPAT*SRSASPAVGKG
Trigger: CCCCTTCCCAACTGCGGGGCTTGCGCTCCGGGACAAGGTGGCAGGCGCTGGAGGCTGCCGCAGCCTGCGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS TCA 72 bp CCAGCCAGTGCCGGTCGCCTGCTCCCACAACCGAGCTaGGCTCCCCTCCACCCACGCAGGCTGCGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: PASAGRLLPQPS*APLHPRRLRQP
Trigger: AGGCTGCCGCAGCCTGCGTGGGTGGAGGGGAGCTCAGCTCGGTTGTGGGAGCAGGCGACCGGCACTGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS CCA 72 bp CGGGTCACCCTCTTTGTCCGCAGCCGGATGCTGCGCTaGGAGGCGGGGGCCACTGAGGACGTCATGCGCTGC +
Preference number: 6 (lower is better)
Translates to: RVTLFVRSRMLR*EAGATEDVMRC
Trigger: GCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS TCA 72 bp CCGCAGCCGGATGCTGCGCTGGGAGGCGGGGGCCACTaGGGACGTCATGCGCTGCAGGATCCTCACGTATGC +
Preference number: 6 (lower is better)
Translates to: PQPDAALGGGGH*GRHALQDPHVC
Trigger: GCATACGTGAGGATCCTGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 72 bp CTGTGCGGGTCACCCTCTTTGTCCGCAGCCGGATGCTaGGCTGGGAGGCGGGGGCCACTGAGGACGTCATGC +
Preference number: 6 (lower is better)
Translates to: LCGSPSLSAAGC*AGRRGPLRTSC
Trigger: GCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 72 bp TGGCTGTGCGGGTCACCCTCTTTGTCCGCAGCCGGATaGTGCGCTGGGAGGCGGGGGCCACTGAGGACGTCA +
Preference number: 6 (lower is better)
Translates to: WLCGSPSLSAAG*CAGRRGPLRTS
Trigger: TGACGTCCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CAA 72 bp CCAGACAGATGGCGATGGCTGTGCGGGTCACCCTCTTaGTCCGCAGCCGGATGCTGCGCTGGGAGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: PDRWRWLCGSPS*SAAGCCAGRRG
Trigger: CCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 72 bp GAGGCTTCCAGGTCCATCCAGCCAGTGCCGGTCGCCTaGTCCCACAACCGAGCTGAGCTCCCCTCCACCCAC +
Preference number: 6 (lower is better)
Translates to: EASRSIQPVPVA*SHNRAELPSTH
Trigger: GTGGGTGGAGGGGAGCTCAGCTCGGTTGTGGGAGCAGGCGACCGGCACTGGCTGGATGGACCTGGAAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS CAA 90 bp CAAAGAAGACCAGACAGATGGCGATGGCTGTGCGGGTCACCCTCTTaGTCCGCAGCCGGATGCTGCGCTGGGAGGCGGGGGCCACTGAGG +
Preference number: 6 (lower is better)
Translates to: QRRPDRWRWLCGSPS*SAAGCCAGRRGPLR
Trigger: CCTCAGTGGCCCCCGCCTCCCAGCGCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 72 bp CGCTGGGAGGCGGGGGCCACTGAGGACGTCATGCGCTaGAGGATCCTCACGTATGCGGCTGTGATGACCACA +
Preference number: 6 (lower is better)
Translates to: RWEAGATEDVMR*RILTYAAVMTT
Trigger: TGTGGTCATCACAGCCGCATACGTGAGGATCCTGCAGCGCATGACGTCCTCAGTGGCCCCCGCCTCCCAGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 72 bp CTGAGCGTTGCTGACAGCGCGAAGCTGCCCCTGGGCTaGAGGCTTCACCGACAGGACCAAGCGTTTGCGGAA +
Preference number: 6 (lower is better)
Translates to: LSVADSAKLPLG*RLHRQDQAFAE
Trigger: TTCCGCAAACGCTTGGTCCTGTCGGTGAAGCCTGCAGCCCAGGGGCAGCTTCGCGCTGTCAGCAACGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CAA 72 bp CCTGCCGAAGTGAGGTTATCGGGGCCATCAGAGGTGTaGCTGGCGTTGGGACCAGTGGGCAGCAGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: PAEVRLSGPSEV*LALGPVGSSEA
Trigger: AGCCTCGCTGCTGCCCACTGGTCCCAACGCCAGCAACACCTCTGATGGCCCCGATAACCTCACTTCGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000381433.2
CDS TCA 72 bp TTTCTGTCCTCTCCTCGTCAGCCGTCTGAGCGTTGCTaGCAGCGCGAAGCTGCCCCTGGGCTGCAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: FLSSPRQPSERC*QREAAPGLQAS
Trigger: TGAAGCCTGCAGCCCAGGGGCAGCTTCGCGCTGTCAGCAACGCTCAGACGGCTGACGAGGAGAGGACAGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CCA 72 bp GTGCCCAGCACACAAAGAAGACCAGACAGATGGCGATaGCTGTGCGGGTCACCCTCTTTGTCCGCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: VPSTQRRPDRWR*LCGSPSLSAAG
Trigger: TCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCTTTGTGTGCTGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CAA 90 bp CGAAGCTGCCCCTGGGCTGCAGGCTTCACCGACAGGACCAAGCGTTaGCGGAACGTCTCACAGAGCACGATGTACACAAAGGGGTTGAGG +
Preference number: 6 (lower is better)
Translates to: RSCPWAAGFTDRTKR*RNVSQSTMYTKGLR
Trigger: CCTCAACCCCTTTGTGTACATCGTGCTCTGTGAGACGTTCCGCAAACGCTTGGTCCTGTCGGTGAAGCCTGCAGCCCAGGGGCAGCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS GCA 72 bp AGGACCTCGGGGACTGGAAGGGGACAAACTCCTCTCTaGATGGGATCTGCCTGGACCAAGCTCACAGAGGTG +
Preference number: 6 (lower is better)
Translates to: RTSGTGRGQTPL*MGSAWTKLTEV
Trigger: CACCTCTGTGAGCTTGGTCCAGGCAGATCCCATGCAGAGAGGAGTTTGTCCCCTTCCAGTCCCCGAGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 72 bp AGCACACAAAGAAGACCAGACAGATGGCGATGGCTGTaGGGGTCACCCTCTTTGTCCGCAGCCGGATGCTGC +
Preference number: 6 (lower is better)
Translates to: STQRRPDRWRWL*GSPSLSAAGCC
Trigger: GCAGCATCCGGCTGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCTTTGTGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CCA 72 bp CCTTCCCTGTGCCCTGACGGCTTCCAACTATCTCGCTaGCTATGCTGCCAGCATCCTGCAGAAGCTGAGTCG +
Preference number: 6 (lower is better)
Translates to: PSLCPDGFQLSR*LCCQHPAEAES
Trigger: CGACTCAGCTTCTGCAGGATGCTGGCAGCATAGCCAGCGAGATAGTTGGAAGCCGTCAGGGCACAGGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CCA 72 bp AAACTGGTACAGGGTGAACCAGTAGAGGTCAGTGTCTaGGTTGGGCAGGCGTATGCCGCAGCCCACTGCACC +
Preference number: 6 (lower is better)
Translates to: KLVQGEPVEVSV*VGQAYAAAHCT
Trigger: GGTGCAGTGGGCTGCGGCATACGCCTGCCCAACCCAGACACTGACCTCTACTGGTTCACCCTGTACCAGTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000249016.4
ENST00000498400.1
CDS CAA 72 bp AGGGTGCACATGGTCTCCCCAAAGTGCCACACCCCATaGCCCATGAGCTGGTGGATCATGAAGGGCATGCCC +
Preference number: 6 (lower is better)
Translates to: RVHMVSPKCHTP*PMSWWIMKGMP
Trigger: GGGCATGCCCTTCATGATCCACCAGCTCATGGGCAATGGGGTGTGGCACTTTGGGGAGACCATGTGCACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000465662.1
ENST00000498400.1
CDS CAA 90 bp GCCGTGATGAGGGTGCACATGGTCTCCCCAAAGTGCCACACCCCATaGCCCATGAGCTGGTGGATCATGAAGGGCATGCCCAGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: AVMRVHMVSPKCHTP*PMSWWIMKGMPRRK
Trigger: CTTTCTCCTGGGCATGCCCTTCATGATCCACCAGCTCATGGGCAATGGGGTGTGGCACTTTGGGGAGACCATGTGCACCCTCATCACGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000465662.1
ENST00000498400.1
CDS TCA 72 bp TCGTCAGCTGCTGAACCCTTGCCTGGCACTCAGAGGTaGCACAGGTCACTCCATGCTGGCAATAGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: SSAAEPLPGTQR*HRSLHAGNSQD
Trigger: GTCCTGGCTATTGCCAGCATGGAGTGACCTGTGTCACCTCTGAGTGCCAGGCAAGGGTTCAGCAGCTGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 72 bp TGCCCTGACGGCTTCCAACTATCTCGCTGGCTATGCTaGCAGCATCCTGCAGAAGCTGAGTCGTCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: CPDGFQLSRWLC*QHPAEAESSAA
Trigger: AGCAGCTGACGACTCAGCTTCTGCAGGATGCTGGCAGCATAGCCAGCGAGATAGTTGGAAGCCGTCAGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 72 bp CTGTGCCCTGACGGCTTCCAACTATCTCGCTGGCTATaGTGCCAGCATCCTGCAGAAGCTGAGTCGTCAGCT +
Preference number: 6 (lower is better)
Translates to: LCPDGFQLSRWL*CQHPAEAESSA
Trigger: AGCTGACGACTCAGCTTCTGCAGGATGCTGGCAGCATAGCCAGCGAGATAGTTGGAAGCCGTCAGGGCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 72 bp GGGCTGCTGCTTGCCTTGCGTGAAGATCGAGGTCTCTaGAAAGGCAAACGGACAAAGCACACAGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: GLLLALREDRGL*KGKRTKHTGCL
Trigger: GAGGCAGCCTGTGTGCTTTGTCCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 72 bp ATGGCCGTGATGAGGGTGCACATGGTCTCCCCAAAGTaGCACACCCCATTGCCCATGAGCTGGTGGATCATG +
Preference number: 6 (lower is better)
Translates to: MAVMRVHMVSPK*HTPLPMSWWIM
Trigger: CATGATCCACCAGCTCATGGGCAATGGGGTGTGGCACTTTGGGGAGACCATGTGCACCCTCATCACGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000465662.1
ENST00000498400.1
CDS GCA 72 bp CCTGGGCTGCAGGCTTCACCGACAGGACCAAGCGTTTaGGGAACGTCTCACAGAGCACGATGTACACAAAGG +
Preference number: 6 (lower is better)
Translates to: PGLQASPTGPSV*GTSHRARCTQR
Trigger: CCTTTGTGTACATCGTGCTCTGTGAGACGTTCCGCAAACGCTTGGTCCTGTCGGTGAAGCCTGCAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CCA 72 bp TCACTCCATGCTGGCAATAGCCAGGACCTCGGGGACTaGAAGGGGACAAACTCCTCTCTGCATGGGATCTGC +
Preference number: 6 (lower is better)
Translates to: SLHAGNSQDLGD*KGTNSSLHGIC
Trigger: GCAGATCCCATGCAGAGAGGAGTTTGTCCCCTTCCAGTCCCCGAGGTCCTGGCTATTGCCAGCATGGAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CCA 72 bp AGTAGGGTGCCCAGCACACAAAGAAGACCAGACAGATaGCGATGGCTGTGCGGGTCACCCTCTTTGTCCGCA +
Preference number: 6 (lower is better)
Translates to: SRVPSTQRRPDR*RWLCGSPSLSA
Trigger: TGCGGACAAAGAGGGTGACCCGCACAGCCATCGCCATCTGTCTGGTCTTCTTTGTGTGCTGGGCACCCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS CAA 72 bp CCCTGGGCTGCAGGCTTCACCGACAGGACCAAGCGTTaGCGGAACGTCTCACAGAGCACGATGTACACAAAG +
Preference number: 6 (lower is better)
Translates to: PWAAGFTDRTKR*RNVSQSTMYTK
Trigger: CTTTGTGTACATCGTGCTCTGTGAGACGTTCCGCAAACGCTTGGTCCTGTCGGTGAAGCCTGCAGCCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000498400.1
CDS TCA 72 bp CAGGCAGCCCCATCAGGAAAGGGATCTCCTTCCCACTaGCACTTGGGATTGTCTCGTGTGCTTACAGGGGCT +
Preference number: 6 (lower is better)
Translates to: QAAPSGKGSPSH*HLGLSRVLTGA
Trigger: AGCCCCTGTAAGCACACGAGACAATCCCAAGTGTCAGTGGGAAGGAGATCCCTTTCCTGATGGGGCTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CCA 72 bp CCTCGGGGACTGGAAGGGGACAAACTCCTCTCTGCATaGGATCTGCCTGGACCAAGCTCACAGAGGTGTTAT +
Preference number: 6 (lower is better)
Translates to: PRGLEGDKLLSA*DLPGPSSQRCY
Trigger: ATAACACCTCTGTGAGCTTGGTCCAGGCAGATCCCATGCAGAGAGGAGTTTGTCCCCTTCCAGTCCCCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CCA 72 bp CCCCATCAGGAAAGGGATCTCCTTCCCACTGACACTTaGGATTGTCTCGTGTGCTTACAGGGGCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: PHQERDLLPTDT*DCLVCLQGLLL
Trigger: AAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGTCAGTGGGAAGGAGATCCCTTTCCTGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CAA 72 bp GATTGTCTCGTGTGCTTACAGGGGCTGCTGCTTGCCTaGCGTGAAGATCGAGGTCTCTGCAAAGGCAAACGG +
Preference number: 6 (lower is better)
Translates to: DCLVCLQGLLLA*REDRGLCKGKR
Trigger: CCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CAA 72 bp CTTGGGATTGTCTCGTGTGCTTACAGGGGCTGCTGCTaGCCTTGCGTGAAGATCGAGGTCTCTGCAAAGGCA +
Preference number: 6 (lower is better)
Translates to: LGIVSCAYRGCC*PCVKIEVSAKA
Trigger: TGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CAA 72 bp ATGAAGATGTCGGGGACGTTGTTGCACCAGTGCAGCTaGGACTTCTTCACGACCGCGAAGATGACCGTGGAG +
Preference number: 6 (lower is better)
Translates to: MKMSGTLLHQCS*DFFTTAKMTVE
Trigger: CTCCACGGTCATCTTCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000465662.1
ENST00000498400.1
CDS CAA 72 bp ACCGAGAGGTTGATGATGAAGATGTCGGGGACGTTGTaGCACCAGTGCAGCTTGGACTTCTTCACGACCGCG +
Preference number: 6 (lower is better)
Translates to: TERLMMKMSGTL*HQCSLDFFTTA
Trigger: CGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCATCATCAACCTCTCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000465662.1
ENST00000498400.1
CDS CAA 90 bp GACACTTGGGATTGTCTCGTGTGCTTACAGGGGCTGCTGCTTGCCTaGCGTGAAGATCGAGGTCTCTGCAAAGGCAAACGGACAAAGCAC +
Preference number: 6 (lower is better)
Translates to: DTWDCLVCLQGLLLA*REDRGLCKGKRTKH
Trigger: GTGCTTTGTCCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CAA 90 bp CCACTGACACTTGGGATTGTCTCGTGTGCTTACAGGGGCTGCTGCTaGCCTTGCGTGAAGATCGAGGTCTCTGCAAAGGCAAACGGACAA +
Preference number: 6 (lower is better)
Translates to: PLTLGIVSCAYRGCC*PCVKIEVSAKANGQ
Trigger: TTGTCCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGTCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CAA 90 bp AGGTTGATGATGAAGATGTCGGGGACGTTGTTGCACCAGTGCAGCTaGGACTTCTTCACGACCGCGAAGATGACCGTGGAGTTCCCGATG +
Preference number: 6 (lower is better)
Translates to: RLMMKMSGTLLHQCS*DFFTTAKMTVEFPM
Trigger: CATCGGGAACTCCACGGTCATCTTCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCATCATCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000465662.1
ENST00000498400.1
CDS GCA 72 bp ATTGTCTCGTGTGCTTACAGGGGCTGCTGCTTGCCTTaGGTGAAGATCGAGGTCTCTGCAAAGGCAAACGGA +
Preference number: 6 (lower is better)
Translates to: IVSCAYRGCCLP*VKIEVSAKANG
Trigger: TCCGTTTGCCTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS GCA 72 bp ACACTTGGGATTGTCTCGTGTGCTTACAGGGGCTGCTaGTTGCCTTGCGTGAAGATCGAGGTCTCTGCAAAG +
Preference number: 6 (lower is better)
Translates to: TLGIVSCAYRGC*LPCVKIEVSAK
Trigger: CTTTGCAGAGACCTCGATCTTCACGCAAGGCAAGCAGCAGCCCCTGTAAGCACACGAGACAATCCCAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000249016.4
CDS CAA 72 bp AACGAGAGGTTGATGATGAAGATGTCGGGGACGTTGTaGCACCAGTGCAGCTTGGACTTCTTCACGACCGCG +
Preference number: 6 (lower is better)
Translates to: NERLMMKMSGTL*HQCSLDFFTTA
Trigger: CGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCATCATCAACCTCTCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381433.2
CDS CAA 90 bp GCCAGGAAAAACGAGAGGTTGATGATGAAGATGTCGGGGACGTTGTaGCACCAGTGCAGCTTGGACTTCTTCACGACCGCGAAGATGACC +
Preference number: 6 (lower is better)
Translates to: ARKNERLMMKMSGTL*HQCSLDFFTTAKMT
Trigger: GGTCATCTTCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCATCATCAACCTCTCGTTTTTCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381433.2
CDS GCA 72 bp TTGATGATGAAGATGTCGGGGACGTTGTTGCACCAGTaGAGCTTGGACTTCTTCACGACCGCGAAGATGACC +
Preference number: 6 (lower is better)
Translates to: LMMKMSGTLLHQ*SLDFFTTAKMT
Trigger: GGTCATCTTCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCATCATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000249016.4
ENST00000381433.2
ENST00000465662.1
ENST00000498400.1
CDS CAA 90 bp AGATCTACTACCGAGAGGTTGATGATGAAGATGTCGGGGACGTTGTaGCACCAGTGCAGCTTGGACTTCTTCACGACCGCGAAGATGACC +
Preference number: 6 (lower is better)
Translates to: RSTTERLMMKMSGTL*HQCSLDFFTTAKMT
Trigger: GGTCATCTTCGCGGTCGTGAAGAAGTCCAAGCTGCACTGGTGCAACAACGTCCCCGACATCTTCATCATCAACCTCTCGGTAGTAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000249016.4
ENST00000465662.1
ENST00000498400.1
CDS GCA 72 bp GACTGGAAGGGGACAAACTCCTCTCTGCATGGGATCTaGCTGGACCAAGCTCACAGAGGTGTTATTTTTCTA +
Preference number: 6 (lower is better)
Translates to: DWKGTNSSLHGI*LDQAHRGVIFL
Trigger: TAGAAAAATAACACCTCTGTGAGCTTGGTCCAGGCAGATCCCATGCAGAGAGGAGTTTGTCCCCTTCCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000249016.4