RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MCF2L (Homo sapiens)

Ensembl gene IDs: ENSG00000126217

Ensembl transcript IDs: ENST00000261963.11, ENST00000375597.8, ENST00000375604.6, ENST00000375608.7, ENST00000397017.6, ENST00000397021.5, ENST00000397024.1, ENST00000397030.5, ENST00000397036.4, ENST00000409954.6, ENST00000413354.5, ENST00000420013.5, ENST00000421756.5, ENST00000423251.1, ENST00000433807.5, ENST00000439475.1, ENST00000441756.1, ENST00000442625.2, ENST00000453297.5, ENST00000464800.5, ENST00000469415.1, ENST00000469558.1, ENST00000473345.5, ENST00000475524.1, ENST00000480321.1, ENST00000486210.1, ENST00000486806.1, ENST00000487354.1, ENST00000488765.1, ENST00000491028.1, ENST00000494043.1, ENST00000535094.7

Found 2353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTGGGCTCGGGGCACGTGGGCCTTACCTGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCGAGCCGGACGGACAGGCTGCTGGCC +
Preference number: 1 (lower is better)
Translates to: GWARGTWALPELLRH*AEPDGPSRTDRLLA
Trigger: GGCCAGCAGCCTGTCCGTCCGGCTCGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 90 bp CCTCGCCCGGGCCCTTGGCAGCGTCACGGGTGGGCTCGGGGCACGTaGGCCTTACCTGAGCTGCTCAGGCACTGGGCCGAGCCGGACGGG +
Preference number: 1 (lower is better)
Translates to: PRPGPWQRHGWARGT*ALPELLRHWAEPDG
Trigger: CCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 90 bp CCGGCGCCGAGGCCGCGCTACCCCTGCAGGTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGAC +
Preference number: 1 (lower is better)
Translates to: PAPRPRYPCRSEKGA*PPSLQLDELLSTAD
Trigger: GTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCTGCAGGGGTAGCGCGGCCTCGGCGCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR TCA 90 bp CCCTTGGCAGCGTCACGGGTGGGCTCGGGGCACGTGGGCCTTACCTaGGCTGCTCAGGCACTGGGCCGAGCCGGACGGGCCGAGCCGGAC +
Preference number: 1 (lower is better)
Translates to: PLAASRVGSGHVGLT*AAQALGRAGRAEPD
Trigger: GTCCGGCTCGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR GCA 90 bp GTCCAGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTaGCCGGCGCCTGCCGCCCGGGGCTGTTCCCTGCGGCCCCTCCTC +
Preference number: 1 (lower is better)
Translates to: VQRQKQHGGARTRCR*PAPAARGCSLRPLL
Trigger: GAGGAGGGGCCGCAGGGAACAGCCCCGGGCGGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCTGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR GCA 90 bp AGCACCGTCCAGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCCGCCCGGGGCTGTTCCCTGCGGCCC +
Preference number: 1 (lower is better)
Translates to: STVQRQKQHGGARTR*RCPAPAARGCSLRP
Trigger: GGGCCGCAGGGAACAGCCCCGGGCGGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCTGGACGGTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR GCA 90 bp GGCAGCGTCACGGGTGGGCTCGGGGCACGTGGGCCTTACCTGAGCTaGTCAGGCACTGGGCCGAGCCGGACGGGCCGAGCCGGACGGACA +
Preference number: 1 (lower is better)
Translates to: GSVTGGLGARGPYLS*SGTGPSRTGRAGRT
Trigger: TGTCCGTCCGGCTCGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 90 bp CGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCCCGGGCCCTTaGCAGCGTCACGGGTGGGCTCGGGGCACGTGGGCCTTACCTGAG +
Preference number: 1 (lower is better)
Translates to: RLCRAHTGQLPRPGP*QRHGWARGTWALPE
Trigger: CTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR TCA 90 bp GGCTGCTGGCCGGCACCCAGCCCTCCTTGCCAGTGGTCGGGTCCCTaGCGTACCTGCAAGGGGCGAGGGTCAGCGGCAGCCACGTGCGGG +
Preference number: 1 (lower is better)
Translates to: GCWPAPSPPCQWSGP*RTCKGRGSAAATCG
Trigger: CCCGCACGTGGCTGCCGCTGACCCTCGCCCCTTGCAGGTACGTCAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCCGGCCAGCAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 90 bp CACACGGGGCAGCTTCCTCGCCCGGGCCCTTGGCAGCGTCACGGGTaGGCTCGGGGCACGTGGGCCTTACCTGAGCTGCTCAGGCACTGG +
Preference number: 1 (lower is better)
Translates to: HTGQLPRPGPWQRHG*ARGTWALPELLRHW
Trigger: CCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTGCCCCGTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR GCA 90 bp CCACTCCCGTGCCTGCGCCCAGGCTTTGCGGCACAGACCGGCCTCTaGGGACCAGGGATGCCCTCCCAGGCCAGCCCTACAAGCACGGCT +
Preference number: 1 (lower is better)
Translates to: PLPCLRPGFAAQTGL*GPGMPSQASPTSTA
Trigger: AGCCGTGCTTGTAGGGCTGGCCTGGGAGGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGCACGGGAGTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 90 bp TGCGCCCAGGCTTTGCGGCACAGACCGGCCTCTGCGGACCAGGGATaGCCTCCCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGC +
Preference number: 1 (lower is better)
Translates to: CAQALRHRPASADQG*PPRPALQARLSRNS
Trigger: GCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGGGAGGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp TATCTGGCGTCTATCTGGCGAGGAGGCGCGGCATGGAGTCCAGGGTaGAAGCCCAGCTCACGTGGCTCAGGACCCCGGGGCCTCGGCCTC +
Preference number: 1 (lower is better)
Translates to: YLASIWRGGAAWSPG*KPSSRGSGPRGLGL
Trigger: GAGGCCGAGGCCCCGGGGTCCTGAGCCACGTGAGCTGGGCTTCCACCCTGGACTCCATGCCGCGCCTCCTCGCCAGATAGACGCCAGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 90 bp CCTGTAGGATGCGGGTGGAGGCTCTGCGGAGGCAGGGCGGTGCAGTaGCCGGGGGAGGGGTCCGGACTGGAGCTGTGGACTAGGAATCAT +
Preference number: 1 (lower is better)
Translates to: PVGCGWRLCGGRAVQ*PGEGSGLELWTRNH
Trigger: ATGATTCCTAGTCCACAGCTCCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGCCTCCGCAGAGCCTCCACCCGCATCCTACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp CGCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTGCGAGACGGCGGTaGGGAGGGACAGGCGCAGAGGCAGCGCGACCTCAAAGTGGGAGA +
Preference number: 1 (lower is better)
Translates to: RLLREVTACCSARRR*GGTGAEAARPQSGR
Trigger: TCTCCCACTTTGAGGTCGCGCTGCCTCTGCGCCTGTCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp CAGCTGCTCCACACAGGTCTGCATCCGGCCACTGTCCCAGCAGCCTaGAAGCCGCAGCCACTGGCAGGGAGCTGTGCACTGTCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: QLLHTGLHPATVPAA*KPQPLAGSCALSSS
Trigger: GCTGGAGGACAGTGCACAGCTCCCTGCCAGTGGCTGCGGCTTTCAGGCTGCTGGGACAGTGGCCGGATGCAGACCTGTGTGGAGCAGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 90 bp CACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTaGACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAA +
Preference number: 1 (lower is better)
Translates to: HTRARSCATRRRHRA*TVHQGHRGTQHAFQ
Trigger: TTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 90 bp CTATCTGGCGTCTATCTGGCGTCTATCTGGCGAGGAGGCGCGGCATaGAGTCCAGGGTGGAAGCCCAGCTCACGTGGCTCAGGACCCCGG +
Preference number: 1 (lower is better)
Translates to: LSGVYLASIWRGGAA*SPGWKPSSRGSGPR
Trigger: CCGGGGTCCTGAGCCACGTGAGCTGGGCTTCCACCCTGGACTCCATGCCGCGCCTCCTCGCCAGATAGACGCCAGATAGACGCCAGATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 90 bp CCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATaGCTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGGGACA +
Preference number: 1 (lower is better)
Translates to: PPRRGAERCRGGARR*LILKTSMRTSGSGT
Trigger: TGTCCCTGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397021.5
3UTR GCA 90 bp GCAGGGCGTCACCTATGTGGCCAACCTCGCTGCAGCAGCAGCAGCTaGTCCACACAGGTCTGCATCCGGCCACTGTCCCAGCAGCCTGAA +
Preference number: 1 (lower is better)
Translates to: AGRHLCGQPRCSSSS*STQVCIRPLSQQPE
Trigger: TTCAGGCTGCTGGGACAGTGGCCGGATGCAGACCTGTGTGGAGCAGCTGCTGCTGCTGCAGCGAGGTTGGCCACATAGGTGACGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp GGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTaGGGTGAATGCTCAGGCCTGCCCCAAACCCCTGCAGACAGCCCC +
Preference number: 1 (lower is better)
Translates to: GLPKCAPDEDVCTGR*GECSGLPQTPADSP
Trigger: GGGGCTGTCTGCAGGGGTTTGGGGCAGGCCTGAGCATTCACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR CCA 90 bp TGCAGTGAACTATGGTGGATGGAGCTGCAGTGGATGACGCGGCTCTaGGAGACCTGTAGGATGCGGGTGGAGGCTCTGCGGAGGCAGGGC +
Preference number: 1 (lower is better)
Translates to: CSELWWMELQWMTRL*ETCRMRVEALRRQG
Trigger: GCCCTGCCTCCGCAGAGCCTCCACCCGCATCCTACAGGTCTCCCAGAGCCGCGTCATCCACTGCAGCTCCATCCACCATAGTTCACTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp TCCCAGCAGACCTGGCCTCAAAGTGGACAACCTCGAGGCTGGACCTaGATGCGCCTAGCAGGGCGTCACCTATGTGGCCAACCTCGCTGC +
Preference number: 1 (lower is better)
Translates to: SQQTWPQSGQPRGWT*MRLAGRHLCGQPRC
Trigger: GCAGCGAGGTTGGCCACATAGGTGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGAGGTTGTCCACTTTGAGGCCAGGTCTGCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp CAGCACGACTGGCCACGTCTATCTGGCGTCTATCTGGCGTCTATCTaGCGAGGAGGCGCGGCATGGAGTCCAGGGTGGAAGCCCAGCTCA +
Preference number: 1 (lower is better)
Translates to: QHDWPRLSGVYLASI*RGGAAWSPGWKPSS
Trigger: TGAGCTGGGCTTCCACCCTGGACTCCATGCCGCGCCTCCTCGCCAGATAGACGCCAGATAGACGCCAGATAGACGTGGCCAGTCGTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 90 bp TATGAAGGAAGAGAAAGAAACTATGCAGAGGGCATCGCAACCCGATaGGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTC +
Preference number: 1 (lower is better)
Translates to: YEGRERNYAEGIATR*GGGSGCRREGPRRL
Trigger: GAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGCATAGTTTCTTTCTCTTCCTTCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
3UTR GCA 90 bp ACCCGCTGGCTGCGCACCCTCTGCGCTAGTGTAGGACTTCCCAAGTaGGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTGAATGC +
Preference number: 1 (lower is better)
Translates to: TRWLRTLCASVGLPK*APDEDVCTGRWGEC
Trigger: GCATTCACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTACACTAGCGCAGAGGGTGCGCAGCCAGCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR TCA 90 bp CACGCTGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATaGCTTACCATGTGCAAGCACAGTGCACTGCGGCCCTGGAAACCC +
Preference number: 1 (lower is better)
Translates to: HAGPCPLPASFPSQQ*LTMCKHSALRPWKP
Trigger: GGGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCAGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTaGGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACA +
Preference number: 1 (lower is better)
Translates to: CKVPLWGGSHKGAQL*DETEAPRLHSTSGT
Trigger: TGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 90 bp AAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTaGCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGCAAGC +
Preference number: 1 (lower is better)
Translates to: KAVARCLSRTLGPAH*RLLFRPNNDLPCAS
Trigger: GCTTGCACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 90 bp TGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGGTTGCTCGGTaGCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGCTTCTTTTC +
Preference number: 1 (lower is better)
Translates to: CHHRRLTEESKAVAR*LSRTLGPAHCRLLF
Trigger: GAAAAGAAGCCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 90 bp GCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGGTTaGTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGCT +
Preference number: 1 (lower is better)
Translates to: AILSSSPSDRRKQSG*SVPEPHAGPCPLPA
Trigger: AGCCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 90 bp CTGGATTCCCAGCAGACCTGGCCTCAAAGTGGACAACCTCGAGGCTaGACCTGGATGCGCCTAGCAGGGCGTCACCTATGTGGCCAACCT +
Preference number: 1 (lower is better)
Translates to: LDSQQTWPQSGQPRG*TWMRLAGRHLCGQP
Trigger: AGGTTGGCCACATAGGTGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGAGGTTGTCCACTTTGAGGCCAGGTCTGCTGGGAATCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp TGTAGACACAGCAGGCCTGGATTCCCAGCAGACCTGGCCTCAAAGTaGACAACCTCGAGGCTGGACCTGGATGCGCCTAGCAGGGCGTCA +
Preference number: 1 (lower is better)
Translates to: CRHSRPGFPADLASK*TTSRLDLDAPSRAS
Trigger: TGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGAGGTTGTCCACTTTGAGGCCAGGTCTGCTGGGAATCCAGGCCTGCTGTGTCTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp GCGCAGAGGCAGCGCGACCTCAAAGTGGGAGACAGGGCGGTAGCCTaGCTGGATTCTGGATCTGTTCTGGAGGCACAGCCAACAGGATTT +
Preference number: 1 (lower is better)
Translates to: AQRQRDLKVGDRAVA*LDSGSVLEAQPTGF
Trigger: AAATCCTGTTGGCTGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCTACCGCCCTGTCTCCCACTTTGAGGTCGCGCTGCCTCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp GGACGATGGGGTTTCTGGCCAAAGGAACTGGACGGAGAGGTGCAGTaGACTATGGTGGATGGAGCTGCAGTGGATGACGCGGCTCTGGGA +
Preference number: 1 (lower is better)
Translates to: GRWGFWPKELDGEVQ*TMVDGAAVDDAALG
Trigger: TCCCAGAGCCGCGTCATCCACTGCAGCTCCATCCACCATAGTTCACTGCACCTCTCCGTCCAGTTCCTTTGGCCAGAAACCCCATCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp GAGTGTGAGAGTGTAGACACAGCAGGCCTGGATTCCCAGCAGACCTaGCCTCAAAGTGGACAACCTCGAGGCTGGACCTGGATGCGCCTA +
Preference number: 1 (lower is better)
Translates to: ECESVDTAGLDSQQT*PQSGQPRGWTWMRL
Trigger: TAGGCGCATCCAGGTCCAGCCTCGAGGTTGTCCACTTTGAGGCCAGGTCTGCTGGGAATCCAGGCCTGCTGTGTCTACACTCTCACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 90 bp GATGAGGACGATGGGGTTTCTGGCCAAAGGAACTGGACGGAGAGGTaGAGTGAACTATGGTGGATGGAGCTGCAGTGGATGACGCGGCTC +
Preference number: 1 (lower is better)
Translates to: DEDDGVSGQRNWTER*SELWWMELQWMTRL
Trigger: GAGCCGCGTCATCCACTGCAGCTCCATCCACCATAGTTCACTGCACCTCTCCGTCCAGTTCCTTTGGCCAGAAACCCCATCGTCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 90 bp GCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTaGCATTTTGGCTCTTTGTTAATCACGCCTCCTTCGAGAGGTCAC +
Preference number: 1 (lower is better)
Translates to: ARLSRNSPRHGLHTV*HFGSLLITPPSRGH
Trigger: GTGACCTCTCGAAGGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp CCATGTGCAAGCACAGTGCACTGCGGCCCTGGAAACCCCGACTGCTaGGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGGAGTT +
Preference number: 1 (lower is better)
Translates to: PCASTVHCGPGNPDC*DVLCLDRQRQMAGV
Trigger: AACTCCTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 90 bp GCAGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTaGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTT +
Preference number: 1 (lower is better)
Translates to: AVRQGQGSLSYGRQH*STPHPAETASLYFL
Trigger: AAGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 90 bp CTCGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTGCCATTTTaGCTCTTTGTTAATCACGCCTCCTTCGAGAGGTCACCGCTTGCT +
Preference number: 1 (lower is better)
Translates to: LEEQPTPRPPHSLPF*LFVNHASFERSPLA
Trigger: AGCAAGCGGTGACCTCTCGAAGGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp TACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTaGTTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGC +
Preference number: 1 (lower is better)
Translates to: YTSEEKLPSLCMLPI*FRTLEVWPVTATSR
Trigger: GCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 90 bp GGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGCAAGCACAGTaGACTGCGGCCCTGGAAACCCCGACTGCTGAGACGTTCTGTGTC +
Preference number: 1 (lower is better)
Translates to: GFFSVPTMTYHVQAQ*TAALETPTAETFCV
Trigger: GACACAGAACGTCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 90 bp AACCTGGATCTCTGGCAAAAAGAAGCTGCTGCATTGAAATTTAGCTaGTCCCTTGACTCCAGGACCCTCCTGCCACTCCCGTGCCTGCGC +
Preference number: 1 (lower is better)
Translates to: NLDLWQKEAAALKFS*SLDSRTLLPLPCLR
Trigger: GCGCAGGCACGGGAGTGGCAGGAGGGTCCTGGAGTCAAGGGAGCAGCTAAATTTCAATGCAGCAGCTTCTTTTTGCCAGAGATCCAGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp TTGTCATGTATAAAATCAGACACCACTAAGCTGTCGACACCAATCTaGGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGT +
Preference number: 1 (lower is better)
Translates to: LSCIKSDTTKLSTPI*AGRGCSLPWLCARC
Trigger: ACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTGTCGACAGCTTAGTGGTGTCTGATTTTATACATGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 90 bp TGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACCTCAACAAACTaGCATCTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAG +
Preference number: 1 (lower is better)
Translates to: CWHKRHQGKRNTSTN*HLRKTDGDSWGTSQ
Trigger: CTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAGATGCCAGTTTGTTGAGGTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp GAATCTCCTTGGCTTCTAACTGCTTTTGGTGGTGGAGACACCACCTaGTGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAG +
Preference number: 1 (lower is better)
Translates to: ESPWLLTAFGGGDTT*CHPRTRFHPPVTRE
Trigger: CTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR TCA 90 bp TCAGGGAAAGAGAAACACCTCAACAAACTGGCATCTGAGGAAGACTaGCGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAAGA +
Preference number: 1 (lower is better)
Translates to: SGKEKHLNKLASEED*RRQLGNVPGKGVRR
Trigger: TCTTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAGATGCCAGTTTGTTGAGGTGTTTCTCTTTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp AACACCTCAACAAACTGGCATCTGAGGAAGACTGACGGCGACAGCTaGGGAACGTCCCAGGTAAGGGAGTCAGAAGAGTTGGATGCTGAA +
Preference number: 1 (lower is better)
Translates to: NTSTNWHLRKTDGDS*GTSQVRESEELDAE
Trigger: TTCAGCATCCAACTCTTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAGATGCCAGTTTGTTGAGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp AAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTaGGCACTACCTGCATCCAAGTTGATAGACCCGCTGGCTGCGCAC +
Preference number: 1 (lower is better)
Translates to: KRFILLVIRLSSKCH*ALPASKLIDPLAAH
Trigger: GTGCGCAGCCAGCGGGTCTATCAACTTGGATGCAGGTAGTGCTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR TCA 90 bp GCATCACAAGAACGACACGCAGTAGCCACTGTTCCTCAGCAGCCATaGGGTGGGCAGAAACACACACATGCTTCTAAAACATGCACCAAT +
Preference number: 1 (lower is better)
Translates to: ASQERHAVATVPQQP*GGQKHTHASKTCTN
Trigger: ATTGGTGCATGTTTTAGAAGCATGTGTGTGTTTCTGCCCACCTCATGGCTGCTGAGGAACAGTGGCTACTGCGTGTCGTTCTTGTGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp AAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTaGGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAGAGAAAGA +
Preference number: 1 (lower is better)
Translates to: KTLQGKALSGKRRAF*GRASDRVIYEGRER
Trigger: TCTTTCTCTTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
3UTR TCA 90 bp TTCTTTATGCTCCCTTTTCTGGTCTGGAGAGTGTCGGCTGCATTGTaGTTCTGTAATGGTTCCACTACGCTTCCTCTGCTGCCTTTGCGT +
Preference number: 1 (lower is better)
Translates to: FFMLPFLVWRVSAAL*FCNGSTTLPLLPLR
Trigger: ACGCAAAGGCAGCAGAGGAAGCGTAGTGGAACCATTACAGAATCACAATGCAGCCGACACTCTCCAGACCAGAAAAGGGAGCATAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 90 bp GAGTTCCTGATTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTaGATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTTA +
Preference number: 1 (lower is better)
Translates to: EFLIATQPPLLYELS*IPFQVIDTATPAFL
Trigger: TAAGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAATCAGGAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 90 bp CGGCTGCATTGTGATTCTGTAATGGTTCCACTACGCTTCCTCTGCTaGCTTTGCGTTTCTGACACGCACAACCTTGTTGCTATTTTGTCA +
Preference number: 1 (lower is better)
Translates to: RLHCDSVMVPLRFLC*LCVSDTHNLVAILS
Trigger: TGACAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGGAACCATTACAGAATCACAATGCAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 90 bp TGTCGGCTGCATTGTGATTCTGTAATGGTTCCACTACGCTTCCTCTaGTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTATTTTG +
Preference number: 1 (lower is better)
Translates to: CRLHCDSVMVPLRFL*CLCVSDTHNLVAIL
Trigger: CAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGGAACCATTACAGAATCACAATGCAGCCGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 90 bp ACTGTCCTCCAGCATCCTCTGAAAACTCTGCCTCCTCATCATCCGTaGGCCAGACGCTTCCAGCATTGCTCGATTTTAACAATGAATTTT +
Preference number: 1 (lower is better)
Translates to: TVLQHPLKTLPPHHP*ARRFQHCSILTMNF
Trigger: AAAATTCATTGTTAAAATCGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAGAGGATGCTGGAGGACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 90 bp ATAAAACAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTaGCCACGTCTATCTGGCGTCTATCTGGCGTCTATCTGGCGAGGA +
Preference number: 1 (lower is better)
Translates to: IKQKPDWNKTLKQHD*PRLSGVYLASIWRG
Trigger: TCCTCGCCAGATAGACGCCAGATAGACGCCAGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTGTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 90 bp ACTTTGCTGTGTTTTGAGCTTTATAGTCAGTGGCTTATGAGTTCCTaGTTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCC +
Preference number: 1 (lower is better)
Translates to: TLLCFELYSQWLMSS*LPRSPLYSMNCPES
Trigger: GGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAATCAGGAACTCATAAGCCACTGACTATAAAGCTCAAAACACAGCAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 90 bp CCCTTCTTCTATTGGATCAATACCCTTTCTTTATGCTCCCTTTTCTaGTCTGGAGAGTGTCGGCTGCATTGTGATTCTGTAATGGTTCCA +
Preference number: 1 (lower is better)
Translates to: PFFYWINTLSLCSLF*SGECRLHCDSVMVP
Trigger: TGGAACCATTACAGAATCACAATGCAGCCGACACTCTCCAGACCAGAAAAGGGAGCATAAAGAAAGGGTATTGATCCAATAGAAGAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 90 bp TATATCAGGGGTCCTGTTATACTAGCAGTGGATCTCTTTAAACAGTaGGGTTTCAGAATGTCATTAACACTTAATTCTCAGAACAGTATT +
Preference number: 1 (lower is better)
Translates to: YIRGPVILAVDLFKQ*GFRMSLTLNSQNSI
Trigger: AATACTGTTCTGAGAATTAAGTGTTAATGACATTCTGAAACCTCACTGTTTAAAGAGATCCACTGCTAGTATAACAGGACCCCTGATATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGCTTCGGCGTCGGCTCTaGCGGGCACACACGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSLRRRL*RAHTGQ
Trigger: CTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAG...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
3UTR-3UTR CCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGCACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: GARGEWSGGAASEEAAVQHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR CAA 90 bp GAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTaGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATG +
Preference number: 2 (lower is better)
Translates to: EAGPAVAGRAQGGSG*HARPRLLLGLALLM
Trigger: CATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
3UTR-3UTR GCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 2 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR-3UTR GCA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 2 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCCACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCG +
Preference number: 2 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSELLRH*AEPDGP
Trigger: CGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR-3UTR CCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCATGGGCTCGGGGCACGTaGGCCTTACCTGAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAWARGT*ALPELL
Trigger: GAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCA...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR-3UTR GCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 2 (lower is better)
Translates to: PCPALLRPLARGSSTSPEVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: PCPALLRPLARGSSTSPEGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGGCCTCCGAGGAGGCTaGAGTGCAGTGAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GHTRARSCATRRRHRACTGLRGG*SAVRQG
Trigger: CCCCTGCCTCACTGCACTGCAGCCTCCTCGGAGGCC...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCTTCGGCGTCGGCTCTaGCGGGCACACACGGGGCAG +
Preference number: 2 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSLRRRL*RAHTGQ
Trigger: CTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR-3UTR CCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: AGAGLSELWSAALVHATPGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 2 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCA +
Preference number: 2 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLPGRPR*SWTSCS
Trigger: TGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR-3UTR CCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 2 (lower is better)
Translates to: PCPALLRPLARGSSTSPEAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 2 (lower is better)
Translates to: STSPEAAPPRSARPLKAPAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAGGCCTCCGAGGAGGCTaGAGTGCAGTGAGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPGLRGG*SAVRQG
Trigger: CCCCTGCCTCACTGCACTGCAGCCTCCTCGGAGGCC...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCG +
Preference number: 2 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSCSWTS*SARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGGGGCTCTCTGAGCTATaGTCGGCAGCACTGGTCCAC +
Preference number: 2 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRGLSEL*SAALVH
Trigger: GTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCC...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCACCAGGTGGCAGGTaGACCTGGGTGGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: HKGAQLCDETEAPRLHSTSPGGR*TWVGGR
Trigger: CCTGCCTCCCACCCAGGTCCACCTGCCACCTGGTGA...TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAAAGGTGGTCACCAGGTaGCAGGTGGACCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GHTRARSCATRRRHRACTKVVTR*QVDLGG
Trigger: CCCACCCAGGTCCACCTGCCACCTGGTGACCACCTT...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCAGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 2 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEAGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: STSPEAAPPRSARPLKAPAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGAGGGCCTTACCTGAGCTaGTCAGGCACTGGGCCGAGC +
Preference number: 2 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGGPYLS*SGTGPS
Trigger: GCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCC...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 2 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCCGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 2 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRRPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR-3UTR GCA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGAGGAGTGGAGTGGAGGTaGGGCCTCCGAGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: RGCSLPWLCARCPVLESRGVEWR*GLRGGC
Trigger: GCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCC...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGGCCGGACGGACAGGCTaGTGGCCGGCACCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLAGRTG*WPAPSP
Trigger: AGGGCTGGGTGCCGGCCAGCAGCCTGTCCGTCCGGC...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR-3UTR CCA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCTCACCAGGTGGCAGGTaGACCTGGGTGGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SCATRRRHRACTVHQGHRSPGGR*TWVGGR
Trigger: CCTGCCTCCCACCCAGGTCCACCTGCCACCTGGTGA...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCGGTGGAGACACCACCTaGTGTCACCCACGGACACGT +
Preference number: 2 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRGGDTT*CHPRTR
Trigger: ACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACC...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGTGCATGCTTCCTATTTaGTTCCGCACCCTGGAGGTC +
Preference number: 2 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRCMLPI*FRTLEV
Trigger: GACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCA...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 2 (lower is better)
Translates to: SYGRQHWSTPHPAETASLVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCAGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGCCACTACGCTTCCTCTaGTGCCTTTGCGTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRPLRFL*CLCVSD
Trigger: GTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGG...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 2 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGAAGGGGCAGGGCTCTCTaGGCTATGGTCGGCAGCACT +
Preference number: 2 (lower is better)
Translates to: RGCSLPWLCARCPVLESRRGRAL*AMVGST
Trigger: AGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCT...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGGCTGGGAGGGTAGCGTaGGGGGAATGCAGCCACGCC +
Preference number: 2 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAAGRVA*GECSHA
Trigger: GGCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGC...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAACACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: CARCPVLESRLPASRELEHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TCGAGGCTGGACCTGGATGCGCCTAGCAGGGCGTCACCTATGTGGCCAACCTCGGGGAGGGGTCCGGACTaGAGCTGTGGACTAGGAATC +
Preference number: 2 (lower is better)
Translates to: SRLDLDAPSRASPMWPTSGRGPD*SCGLGI
Trigger: GATTCCTAGTCCACAGCTCCAGTCCGGACCCCTCCC...CGAGGTTGGCCACATAGGTGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGTGGAGGTCTGGCCAGTaGCGGCTACAAGCCGCTGGG +
Preference number: 2 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDEWRSGQ*RLQAAG
Trigger: CCCAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCA...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCTGGCTTATGAGTTCCTaGTTGCCACGCAGCCCCCTT +
Preference number: 2 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVWLMSS*LPRSPL
Trigger: AAGGGGGCTGCGTGGCAATCAGGAACTCATAAGCCA...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGGAGTGGAGTGGAGGTaGGGCCTCCGAGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWGVEWR*GLRGGC
Trigger: GCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCC...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: CARCPVLESRLPASRELEGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGCGTGGGGAGTGGAGTaGAGGTGCGGCCTCCGAGGA +
Preference number: 2 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWAWGVE*RCGLRG
Trigger: TCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGC...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACTTCTGTACTCAAGGTaGTCACCAGGTGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPLLYSR*SPGGRW
Trigger: CCACCTGCCACCTGGTGACCACCTTGAGTACAGAAG...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATCCTCGCCCGGGCCCTTaGCAGCGTCACGGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHPRPGP*QRHGWA
Trigger: AGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGG...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR-3UTR TCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTGGAACCGTGAGGCTGTaGGGCGGCCCTCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: GKAAESLHASYLIPHPGGGTVRL*GGPPSS
Trigger: GCTGCTGGGAGGGCCGCCTCACAGCCTCACGGTTCC...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGCACGTGGGCCTTACCTaGGCTGCTCAGGCACTGGGC +
Preference number: 2 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVHVGLT*AAQALG
Trigger: GCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTG...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR-3UTR TCA 90 bp CTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAATGGAGCTGCAGTGGATaGCGCGGCTCTGGGAGACCT +
Preference number: 2 (lower is better)
Translates to: LRKTDGDSWGTSQVRESEWSCSG*RGSGRP
Trigger: AGGTCTCCCAGAGCCGCGTCATCCACTGCAGCTCCA...TTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTTCGGCGTCGGCTCTaGCGGGCACACACGGGGCAG +
Preference number: 2 (lower is better)
Translates to: GKAAESLHASYLIPHPGGLRRRL*RAHTGQ
Trigger: CTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAG...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 2 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGCGTGGGGAGTGGAGTaGAGGTGCGGCCTCCGAGGA +
Preference number: 2 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQAWGVE*RCGLRG
Trigger: TCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGC...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHSEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 2 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTCGAGAGGTCACCGCTTaGTGTTCTGCGAGACGGCGG +
Preference number: 2 (lower is better)
Translates to: RGTAHATASTQFAILALCREVTA*CSARRR
Trigger: CCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCG...ACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCACACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 2 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGACTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 2 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGACGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 2 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGRPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR-3UTR CCA 90 bp GCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTGCGAGACGGCGGTGGGGAGGGATGCAGTGAACTATGGTaGATGGAGCTGCAGTGGATG +
Preference number: 2 (lower is better)
Translates to: ASFERSPLAVLRDGGGEGCSELW*MELQWM
Trigger: CATCCACTGCAGCTCCATCCACCATAGTTCACTGCA...TCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp TCGAGGCTGGACCTGGATGCGCCTAGCAGGGCGTCACCTATGTGGCCAACCTCGAGCCTGGCTGGATTCTaGATCTGTTCTGGAGGCACA +
Preference number: 2 (lower is better)
Translates to: SRLDLDAPSRASPMWPTSSLAGF*ICSGGT
Trigger: TGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCT...CGAGGTTGGCCACATAGGTGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp TGCCTGCGCCCAGGCTTTGCGGCACAGACCGGCCTCTGCGGACCAGGGATGCCCCACAGTTTGCCATTTTaGCTCTTTGTTAATCACGCC +
Preference number: 2 (lower is better)
Translates to: CLRPGFAAQTGLCGPGMPHSLPF*LFVNHA
Trigger: GGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTG...GGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp GCTGAGCGTACTGTCTGTGAGCAGCAGGGGCCGGTAGGGGAGGATTCTCCCATTGACCTGGCCTCAAAGTaGACAACCTCGAGGCTGGAC +
Preference number: 2 (lower is better)
Translates to: AERTVCEQQGPVGEDSPIDLASK*TTSRLD
Trigger: GTCCAGCCTCGAGGTTGTCCACTTTGAGGCCAGGTC...AATGGGAGAATCCTCCCCTACCGGCCCCTGCTGCTCACAGACAGTACGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTAGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 2 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGATCCTTGGCTTCTAACTaGTTTTGGTGGTGGAGACAC +
Preference number: 2 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGSLASN*FWWWRH
Trigger: GTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGA...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGCATGTGCAAGCACAGTaGACTGCGGCCCTGGAAACC +
Preference number: 2 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAHVQAQ*TAALET
Trigger: GGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATG...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 2 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGAGTGCACTGCGGCCCTaGAAACCCCGACTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVSALRP*KPRLLR
Trigger: TCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCACT...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCAAGACGTTCTGTGTCTTaGCAGACAAAGGCAGATGGC +
Preference number: 2 (lower is better)
Translates to: SLPWLCARCPVLESRLPARRSVS*QTKADG
Trigger: GCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCT...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp GCTGAGCGTACTGTCTGTGAGCAGCAGGGGCCGGTAGGGGAGGATTCTCCCATTGGTCGGATACGGGCATaGGTGAAAACACAGATGAGG +
Preference number: 2 (lower is better)
Translates to: AERTVCEQQGPVGEDSPIGRIRA*VKTQMR
Trigger: CCTCATCTGTGTTTTCACTCATGCCCGTATCCGACC...AATGGGAGAATCCTCCCCTACCGGCCCCTGCTGCTCACAGACAGTACGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp CTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAAGAAAATGCCAAGCATTaGCCGCCTGTGCTGCGATGG +
Preference number: 2 (lower is better)
Translates to: LRKTDGDSWGTSQVRESEENAKH*PPVLRW
Trigger: CCATCGCAGCACAGGCGGTCAATGCTTGGCATTTTC...TTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTAAGGGCGCGCAGCTGTaGGACGAGACGGAGGCACCG +
Preference number: 2 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVKGAQL*DETEAP
Trigger: CGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTT...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTACTGGGCCCTGCCCACTaGCGGCTTCTTTTCCGTCCC +
Preference number: 2 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLLGPAH*RLLFRP
Trigger: GGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCAG...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCCTAAAGACGCTCAGGGACAGGCTTaGACCAAAACGATGAAGGTT +
Preference number: 2 (lower is better)
Translates to: ARGREVPWGCKEMPHPKDAQGQA*TKTMKV
Trigger: AACCTTCATCGTTTTGGTGCAAGCCTGTCCCTGAGC...GTCTTTAGGATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397021.5
3UTR-3UTR GCA 90 bp AGTGGGCCAAAAAGTCCAAAGCCTCTACAGTTTGGAGACATCACAGCTGACTGCTGCCACTCCCGTGCCTaGGCCCAGGCTTTGCGGCAC +
Preference number: 2 (lower is better)
Translates to: SGPKSPKPLQFGDITADCCHSRA*AQALRH
Trigger: GTGCCGCAAAGCCTGGGCGCAGGCACGGGAGTGGCA...GCAGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTGGACTTTTTGGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp CTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAATGCACCATTATCCTTTaGTCTCGGGGGCGGCCTGTA +
Preference number: 2 (lower is better)
Translates to: LRKTDGDSWGTSQVRESECTIIL*SRGRPV
Trigger: TACAGGCCGCCCCCGAGAGCAAAGGATAATGGTGCA...TTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 2 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATTATGCTCCCTTTTCTaGTCTGGAGAGTGTCGGCTG +
Preference number: 2 (lower is better)
Translates to: SLPWLCARCPVLESRLPALCSLF*SGECRL
Trigger: CAGCCGACACTCTCCAGACCAGAAAAGGGAGCATAA...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CAA 90 bp AGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCACACAGTTaGCCATTTTGGCTCTTTGTTAATCACGCCTCCTTCGAGAGGTCA +
Preference number: 2 (lower is better)
Translates to: STALEEQPTPRPPHS*PFWLFVNHASFERS
Trigger: TGACCTCTCGAAGGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCCACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: SCATRRRHRACTVHQGHRHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 2 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTGGGGCGCGTGGGGAGTaGAGTGGAGGTGCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLGARGE*SGGAAS
Trigger: GGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTCTTCTGTACTCAAGGTaGTCACCAGGTGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGLLYSR*SPGGRW
Trigger: CCACCTGCCACCTGGTGACCACCTTGAGTACAGAAG...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTAACGGCTACAAGCCGCTaGGAGGGTAGCGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLTATSR*EGSVRG
Trigger: TCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGT...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTACGCACCCTGGAGGTCTaGCCAGTGACGGCTACAAGC +
Preference number: 2 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLRTLEV*PVTATS
Trigger: GCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCG...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATGGAACCGTGAGGCTGTaGGGCGGCCCTCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: PNNLHIRGKAAESLHASYGTVRL*GGPPSS
Trigger: GCTGCTGGGAGGGCCGCCTCACAGCCTCACGGTTCC...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp ACCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGATGGGGCTGGCCTTGCTaGTGCAGGGGTGCAGAGCAA +
Preference number: 2 (lower is better)
Translates to: TFEVSKTLQGKALSGKRRWGWPC*CRGAEQ
Trigger: TTGCTCTGCACCCCTGCATCAGCAAGGCCAGCCCCA...TCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375597.8
3UTR-3UTR GCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATTCCTTGGCTTCTAACTaGTTTTGGTGGTGGAGACAC +
Preference number: 2 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNSLASN*FWWWRH
Trigger: GTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGA...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAAAGCATTGACCGCCTGTaGTGCGATGGCATTTGTAAG +
Preference number: 2 (lower is better)
Translates to: LRKTDGDSWGTSQVRESESIDRL*CDGICK
Trigger: CTTACAAATGCCATCGCAGCACAGGCGGTCAATGCT...TTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 2 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 2 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 2 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTGGGGCGCGTGGGGAGTaGAGTGGAGGTGCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSGARGE*SGGAAS
Trigger: GGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGAAGGTGGTCACCAGGTaGCAGGTGGACCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKKVVTR*QVDLGG
Trigger: CCCACCCAGGTCCACCTGCCACCTGGTGACCACCTT...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGCGCACCCTGGAGGTCTaGCCAGTGACGGCTACAAGC +
Preference number: 2 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLRTLEV*PVTATS
Trigger: GCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCG...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTCGCACCCTGGAGGTCTaGCCAGTGACGGCTACAAGC +
Preference number: 2 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVRTLEV*PVTATS
Trigger: GCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCG...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 2 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPSEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CAA 90 bp TTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTaGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCG +
Preference number: 2 (lower is better)
Translates to: LHIRGKAAESLHASY*IPHPGGLASDGYKP
Trigger: CGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTGCTGGGAGGGTAGCGTaGGGGGAATGCAGCCACGCC +
Preference number: 2 (lower is better)
Translates to: MNCPESHFRSSILLHQLSAGRVA*GECSHA
Trigger: GGCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGC...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAACTGCCTTTGCGTTTCTaGCACGCACAACCTTGTTGC +
Preference number: 2 (lower is better)
Translates to: CARCPVLESRLPASRELELPLRF*HAQPCC
Trigger: GCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAG...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: SAALVHATPCRNCIFVFSGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCTCCTTGGCTTCTAACTaGTTTTGGTGGTGGAGACAC +
Preference number: 2 (lower is better)
Translates to: PTDTFSSTCDQGASGSAISLASN*FWWWRH
Trigger: GTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGA...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGGTCCACGCCACACCCTaGAGAAACTGCATCTTTGTA +
Preference number: 2 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVVHATP*RNCIFV
Trigger: TACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGAC...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTGGAGTGGAGTGGAGGTaGGGCCTCCGAGGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPGVEWR*GLRGGC
Trigger: GCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCC...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLNCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 2 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCATATGGTCGGCAGCACTaGTCCACGCCACACCCTGCA +
Preference number: 2 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSYGRQH*STPHPA
Trigger: TGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATA...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CCTGTAAATAAGGCTCTGCACACAAAATCACAAAGGCATCACAAGAACGACACGTCTGCGAGACGGCGGTaGGGAGGGACAGGCGCAGAG +
Preference number: 2 (lower is better)
Translates to: PVNKALHTKSQRHHKNDTSARRR*GGTGAE
Trigger: CTCTGCGCCTGTCCCTCCCCACCGCCGTCTCGCAGA...CGTGTCGTTCTTGTGATGCCTTTGTGATTTTGTGTGCAGAGCCTTATTTACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 90 bp CTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGGGACAGGCTaGCACCAAAACGATGAAGGTTGTGGGCATCGGAGCAGATATGGG +
Preference number: 2 (lower is better)
Translates to: LILKTSMRTSGSGTG*HQNDEGCGHRSRYG
Trigger: CCCATATCTGCTCCGATGCCCACAACCTTCATCGTTTTGGTGCAAGCCTGTCCCTGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397021.5
3UTR-3UTR TCA 90 bp TGCAAGGAGATGCCTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGGGACCTTGCACCAAAACGATaGAGGTTGTGGGCATCGGAG +
Preference number: 2 (lower is better)
Translates to: CKEMPHPKDFDENQRLRDLAPKR*RLWASE
Trigger: CTCCGATGCCCACAACCTTCATCGTTTTGGTGCAAG...GTCCCTGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAGGCATCTCCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397021.5
3UTR-3UTR TCA 90 bp AGTGGGCCAAAAAGTCCAAAGCCTCTACAGTTTGGAGACATCACAGCTGACTGCAAGAGCAGCCCCTGCTaGGCTGAGCGTACTGTCTGT +
Preference number: 2 (lower is better)
Translates to: SGPKSPKPLQFGDITADCKSSPC*AERTVC
Trigger: ACAGACAGTACGCTCAGCTCAGCAGGGGCTGCTCTT...GCAGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTGGACTTTTTGGCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 2 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCACACCCTGCAGAAACTaGATCTTTGTATTTTCTTTA +
Preference number: 2 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRTPCRN*IFVFSL
Trigger: TAAAGAAAATACAAAGATGCAGTTTCTGCAGGGTGT...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGCATGTGCAAGCACAGTaGACTGCGGCCCTGGAAACC +
Preference number: 2 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLHVQAQ*TAALET
Trigger: GGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATG...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTCACCGCTTGCTGTTCTaGGAGACGGCGGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETHRLLF*ETAVGR
Trigger: CCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTG...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTTCTGCGGACCAGGGATaGCCTCCCAGGCCAGCCCTA +
Preference number: 2 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETSADQG*PPRPAL
Trigger: TAGGGCTGGCCTGGGAGGGCATCCCTGGTCCGCAGA...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACCTCCTGCCACTCCCGTaGCTGCGCCCAGGCTTTGCG +
Preference number: 2 (lower is better)
Translates to: RAESLYLLAQEASGKEKHLLPLP*LRPGFA
Trigger: CGCAAAGCCTGGGCGCAGGCACGGGAGTGGCAGGAG...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp GCTGAGCGTACTGTCTGTGAGCAGCAGGGGCCGGTAGGGGAGGATTCTCCCATTCATGCTTCTAAAACATaGACCAATGGGCAGAATGTG +
Preference number: 2 (lower is better)
Translates to: AERTVCEQQGPVGEDSPIHASKT*TNGQNV
Trigger: CACATTCTGCCCATTGGTGCATGTTTTAGAAGCATG...AATGGGAGAATCCTCCCCTACCGGCCCCTGCTGCTCACAGACAGTACGCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTCTAACTGCTTTTGGTaGTGGAGACACCACCTGATG +
Preference number: 2 (lower is better)
Translates to: SYGRQHWSTPHPAETASLSNCFW*WRHHLM
Trigger: CATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGA...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTGGTGGAGACACCACCTaGTGTCACCCACGGACACGT +
Preference number: 2 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTGGDTT*CHPRTR
Trigger: ACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACC...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCGCGGCCGCAAGGAGCTaGGATTGCACCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGAAARS*DCTTAL
Trigger: GAGTGCAGTGGTGCAATCTCAGCTCCTTGCGGCCGC...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR-3UTR GCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGACACCCTGCAGAAACTaGATCTTTGTATTTTCTTTA +
Preference number: 2 (lower is better)
Translates to: CLYGEGHTRARSCATRRRTPCRN*IFVFSL
Trigger: TAAAGAAAATACAAAGATGCAGTTTCTGCAGGGTGT...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCAGAGATGTCATACGAAATGCATGTAGAGTTTGATAGGAAAACCTCATCGTGTACTCCAGGACCCTCCTaGCACTCCCGTGCCTGCGCC +
Preference number: 2 (lower is better)
Translates to: PEMSYEMHVEFDRKTSSCTPGPS*HSRACA
Trigger: GGCGCAGGCACGGGAGTGGCAGGAGGGTCCTGGAGT...ACACGATGAGGTTTTCCTATCAAACTCTACATGCATTTCGTATGACATCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp CCTGTAAATAAGGCTCTGCACACAAAATCACAAAGGCATCACAAGAACGACACGTGTGGCCAACCTCGCTaGAGCAGCAGCAGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: PVNKALHTKSQRHHKNDTCGQPR*SSSSCS
Trigger: GGAGCAGCTGCTGCTGCTGCAGCGAGGTTGGCCACA...CGTGTCGTTCTTGTGATGCCTTTGTGATTTTGTGTGCAGAGCCTTATTTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 2 (lower is better)
Translates to: TTLLLFCHHRRLTEESKAAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQNCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTCTTCTGTACTCAAGGTaGTCACCAGGTGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: IRGKAAESLHASYLIPHPLLYSR*SPGGRW
Trigger: CCACCTGCCACCTGGTGACCACCTTGAGTACAGAAG...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACCCTCGAGGCTGGACCTaGATGCGCCTAGCAGGGCGT +
Preference number: 2 (lower is better)
Translates to: RAESLYLLAQEASGKEKHPRGWT*MRLAGR
Trigger: ACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGAGG...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp CTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAATTAGGATACACAAGGTaGAAGAAGAGACTACAAGGG +
Preference number: 2 (lower is better)
Translates to: LRKTDGDSWGTSQVRESELGYTR*KKRLQG
Trigger: CCCTTGTAGTCTCTTCTTCCACCTTGTGTATCCTAA...TTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 90 bp TGCACTGCGGCCCTGGAAACCCCGACTGCTGAGACGTTCTGTGTCTaGACAGACAAAGGCAGATGGCAGGAGTTGCTGATATTTATTCAA +
Preference number: 2 (lower is better)
Translates to: CTAALETPTAETFCV*TDKGRWQELLIFIQ
Trigger: TTGAATAAATATCAGCAACTCCTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGTTCCTGGTGAAGAATTaGGGCCAAAGTACCACAAAA +
Preference number: 2 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWFLVKN*GQSTTK
Trigger: TTTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAA...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGCACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACAAATATTTTGTTTGTaGTCCATGTGTGCTGGAAAA +
Preference number: 2 (lower is better)
Translates to: RGCSLPWLCARCPVLESRQIFCL*SMCAGK
Trigger: TTTTCCAGCACACATGGAGCACAAACAAAATATTTG...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp GAAGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACGGGAGACCTGTAGGATaGGGGTGGAGGCTCTGCGGA +
Preference number: 2 (lower is better)
Translates to: EELKVFICWHKRHQGKRNGRPVG*GWRLCG
Trigger: TCCGCAGAGCCTCCACCCGCATCCTACAGGTCTCCC...GTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACCTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 2 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: LLLVVETPPDVTHGHVFINCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTTATGGTCGGCAGCACTaGTCCACGCCACACCCTGCA +
Preference number: 2 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPYGRQH*STPHPA
Trigger: TGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATA...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CAA 90 bp CTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTATTTaGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGGTTGCTCG +
Preference number: 2 (lower is better)
Translates to: LCCLCVSDTHNLVAI*SSSPSDRRKQSGCS
Trigger: CGAGCAACCGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp CTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAACTGATAGCAAAAATCTaGATAAGGCAAATAGAGCTC +
Preference number: 2 (lower is better)
Translates to: LRKTDGDSWGTSQVRESELIAKI*IRQIEL
Trigger: GAGCTCTATTTGCCTTATTCAGATTTTTGCTATCAG...TTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp GAAGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACGCATCTGAGGAAGACTaGCGGCGACAGCTGGGGAAC +
Preference number: 2 (lower is better)
Translates to: EELKVFICWHKRHQGKRNASEED*RRQLGN
Trigger: GTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAGATGC...GTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 2 (lower is better)
Translates to: MNCPESHFRSSILLHQLSGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTCATGTGCAAGCACAGTaGACTGCGGCCCTGGAAACC +
Preference number: 2 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLHVQAQ*TAALET
Trigger: GGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATG...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAATCAGGTCATCGATACTaGTACACCAGCTTTCTTATG +
Preference number: 2 (lower is better)
Translates to: CARCPVLESRLPASRELESGHRY*YTSFLM
Trigger: CATAAGAAAGCTGGTGTAGCAGTATCGATGACCTGA...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAGCCGACTGCCAACTTTaGTGTGTTTTGAGCTTTATA +
Preference number: 2 (lower is better)
Translates to: CARCPVLESRLPASRELEADCQL*CVLSFI
Trigger: TATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGC...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTGAGACTCACACTGCCGAGTaGCTCCCGAGACTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LQRDSSSWLLDSPPNATETHTAE*LPRLAG
Trigger: TCCTGCCAGTCTCGGGAGGCACTCGGCAGTGTGAGT...CTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR-3UTR GCA 90 bp GAGTTTAAGGAGTGTGAGAGTGTAGACACAGCAGGCCTGGATTCCCAGCAGACCGGCCTCCACACAGTTTaGCATTTTGGCTCTTTGTTA +
Preference number: 2 (lower is better)
Translates to: EFKECESVDTAGLDSQQTGLHTV*HFGSLL
Trigger: TAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCC...GGTCTGCTGGGAATCCAGGCCTGCTGTGTCTACACTCTCACACTCCTTAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp GAAGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACTGCTCCACACAGGTCTaGATCCGGCCACTGTCCCAG +
Preference number: 2 (lower is better)
Translates to: EELKVFICWHKRHQGKRNCSTQV*IRPLSQ
Trigger: CTGGGACAGTGGCCGGATGCAGACCTGTGTGGAGCA...GTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 2 (lower is better)
Translates to: MNCPESHFRSSILLHQLSLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCAGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 2 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTGTAAAGTGCCTTTATaGGGAGGGTCACACAAGGGC +
Preference number: 2 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMCKVPL*GGSHKG
Trigger: GCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CAA 90 bp TACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTaGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCG +
Preference number: 2 (lower is better)
Translates to: YASSAAFAFLTRTTL*LFCHHRRLTEESKA
Trigger: CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCAGCTACTTGGGAGGCTaGGGCAGGAGAATAGCTGGA +
Preference number: 2 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGSYLGG*GRRIAG
Trigger: TCCAGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCT...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR-3UTR GCA 90 bp AGTGGGCCAAAAAGTCCAAAGCCTCTACAGTTTGGAGACATCACAGCTGACTGCGCATTGAAATTTAGCTaGTCCCTTGACTCCAGGACC +
Preference number: 2 (lower is better)
Translates to: SGPKSPKPLQFGDITADCALKFS*SLDSRT
Trigger: GGTCCTGGAGTCAAGGGAGCAGCTAAATTTCAATGC...GCAGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTGGACTTTTTGGCCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 2 (lower is better)
Translates to: ICRLDTERASKVLNRICFAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 2 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVNCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCATCTAACTGCTTTTGGTaGTGGAGACACCACCTGATG +
Preference number: 2 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSSNCFW*WRHHLM
Trigger: CATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGA...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGTCTAACTGCTTTTGGTaGTGGAGACACCACCTGATG +
Preference number: 2 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLSNCFW*WRHHLM
Trigger: CATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGA...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCGCACTCCATCCAGCTTaGGCAACAGAGCAGGACTCT +
Preference number: 2 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGALHPA*ATEQDS
Trigger: AGAGTCCTGCTCTGTTGCCCAAGCTGGATGGAGTGC...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR CAA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTaGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAA +
Preference number: 2 (lower is better)
Translates to: HYASSAAFAFLTRTT*LLFCHHRRLTEESK
Trigger: TTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCACACGCACAACCTTGTTaGTATTTTGTCATCATCGCC +
Preference number: 2 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSHAQPC*YFVIIA
Trigger: GGCGATGATGACAAAATAGCAACAAGGTTGTGCGTG...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTCCACTACGCTTCCTCTaGTGCCTTTGCGTTTCTGAC +
Preference number: 2 (lower is better)
Translates to: MNCPESHFRSSILLHQLSPLRFL*CLCVSD
Trigger: GTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGG...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAATAAAGGAATCTCCTTaGCTTCTAACTGCTTTTGGT +
Preference number: 2 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGIKESP*LLTAFG
Trigger: ACCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTAT...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp TCAGATCCTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCGTTTGCACAGGACGCTaGGGTGAATGCTCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SDPSKRFILLVIRLSSKCVCTGR*GECSGL
Trigger: CAGGCCTGAGCATTCACCCCAGCGTCCTGTGCAAAC...GCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAGGATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR-3UTR CCA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACGGACGATGGGGTTTCTaGCCAAAGGAACTGGACGGA +
Preference number: 2 (lower is better)
Translates to: RAESLYLLAQEASGKEKHGRWGF*PKELDG
Trigger: TCCGTCCAGTTCCTTTGGCCAGAAACCCCATCGTCC...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCTTGAGGTCAAGAGCTTaGGACCAGCCTGGACAACAT +
Preference number: 2 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGLRSRA*DQPGQH
Trigger: ATGTTGTCCAGGCTGGTCTCAAGCTCTTGACCTCAA...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR-3UTR TCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTACTGGAATAAGACCTTaGAACAGCACGACTGGCCAC +
Preference number: 2 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETTGIRP*NSTTGH
Trigger: GTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGT...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACCAACAAACTGGCATCTaGGGAAGACTGACGGCGACA +
Preference number: 2 (lower is better)
Translates to: RAESLYLLAQEASGKEKHQQTGI*GRLTAT
Trigger: TGTCGCCGTCAGTCTTCCTCAGATGCCAGTTTGTTG...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATGTCCACGCCACACCCTaGAGAAACTGCATCTTTGTA +
Preference number: 2 (lower is better)
Translates to: PNNLHIRGKAAESLHASYVHATP*RNCIFV
Trigger: TACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGAC...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTTTCCTCTGCTGCCTTTaGGTTTCTGACACGCACAAC +
Preference number: 2 (lower is better)
Translates to: MNCPESHFRSSILLHQLSFLCCL*VSDTHN
Trigger: GTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAA...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CCAGGGAGAATTATGATCTCAACAACTAAATCATTTCCAAACCCTTACTGCTGTGTGAATGCTCAGGCCTaGCCCAAACCCCTGCAGACA +
Preference number: 2 (lower is better)
Translates to: PGRIMISTTKSFPNPYCCVNAQA*PKPLQT
Trigger: TGTCTGCAGGGGTTTGGGGCAGGCCTGAGCATTCAC...ACAGCAGTAAGGGTTTGGAAATGATTTAGTTGTTGAGATCATAATTCTCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR-3UTR GCA 90 bp CTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTGAGGTAGGACTTCCCAAGTaGGCTCCTGACGAAGACGTT +
Preference number: 2 (lower is better)
Translates to: LQRDSSSWLLDSPPNATEVGLPK*APDEDV
Trigger: AACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC...CTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR-3UTR CCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCATAAAGGAATCTCCTTaGCTTCTAACTGCTTTTGGT +
Preference number: 2 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFIKESP*LLTAFG
Trigger: ACCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTAT...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CCA 90 bp CCTGTAAATAAGGCTCTGCACACAAAATCACAAAGGCATCACAAGAACGACACGTCCGGACTGGAGCTGTaGACTAGGAATCATCACACT +
Preference number: 2 (lower is better)
Translates to: PVNKALHTKSQRHHKNDTSGLEL*TRNHHT
Trigger: AGTGTGATGATTCCTAGTCCACAGCTCCAGTCCGGA...CGTGTCGTTCTTGTGATGCCTTTGTGATTTTGTGTGCAGAGCCTTATTTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CCA 90 bp CCAGAGATGTCATACGAAATGCATGTAGAGTTTGATAGGAAAACCTCATCGTGTGACAGGGCGGTAGCCTaGCTGGATTCTGGATCTGTT +
Preference number: 2 (lower is better)
Translates to: PEMSYEMHVEFDRKTSSCDRAVA*LDSGSV
Trigger: AACAGATCCAGAATCCAGCCAGGCTACCGCCCTGTC...ACACGATGAGGTTTTCCTATCAAACTCTACATGCATTTCGTATGACATCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR GCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTTTCCTCTGCTGCCTTTaGGTTTCTGACACGCACAAC +
Preference number: 2 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSFLCCL*VSDTHN
Trigger: GTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAA...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTGGATTCTCCCATTTGTaGAGTTCAGTTAGAGCTCTC +
Preference number: 2 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSGFSHL*SSVRAL
Trigger: GAGAGCTCTAACTGAACTGCACAAATGGGAGAATCC...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATCACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: PNNLHIRGKAAESLHASYHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTCACGCACAACCTTGTTaGTATTTTGTCATCATCGCC +
Preference number: 2 (lower is better)
Translates to: MNCPESHFRSSILLHQLSHAQPC*YFVIIA
Trigger: GGCGATGATGACAAAATAGCAACAAGGTTGTGCGTG...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTATCTCTATCGTTCTATaGAGAAAGTGGGCCAAAAAG +
Preference number: 2 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSISIVL*RKWAKK
Trigger: CTTTTTGGCCCACTTTCTTCATAGAACGATAGAGAT...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR TCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTACAGTGGATGAAACATaGAGCTGTAAAGTGCCTTTA +
Preference number: 2 (lower is better)
Translates to: MNCPESHFRSSILLHQLSTVDET*SCKVPL
Trigger: TAAAGGCACTTTACAGCTTCATGTTTCATCCACTGT...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTTTTGTGCTCCATGTGTaGTGGAAAATAACGCAGATT +
Preference number: 2 (lower is better)
Translates to: MNCPESHFRSSILLHQLSFVLHV*WKITQI
Trigger: AATCTGCGTTATTTTCCAGCACACATGGAGCACAAA...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR TCA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACTCAGGCCATATTTCTTaGTGTTTTGGCTCTAAAAAG +
Preference number: 2 (lower is better)
Translates to: RAESLYLLAQEASGKEKHSGHIS*CFGSKK
Trigger: CTTTTTAGAGCCAAAACATCAAGAAATATGGCCTGA...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 72 bp GGGCCGAGCCGGACGGGCCGAGCCGGACGGACAGGCTaGTGGCCGGCACCCAGCCCTCCTTGCCAGTGGTCG +
Preference number: 3 (lower is better)
Translates to: GPSRTGRAGRTG*WPAPSPPCQWS
Trigger: CGACCACTGGCAAGGAGGGCTGGGTGCCGGCCAGCAGCCTGTCCGTCCGGCTCGGCCCGTCCGGCTCGGCCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 72 bp CGGGCACACACGGGGCAGCTTCCTCGCCCGGGCCCTTaGCAGCGTCACGGGTGGGCTCGGGGCACGTGGGCC +
Preference number: 3 (lower is better)
Translates to: RAHTGQLPRPGP*QRHGWARGTWA
Trigger: GGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTGCCCCGTGTGTGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR TCA 72 bp GCGTCACGGGTGGGCTCGGGGCACGTGGGCCTTACCTaGGCTGCTCAGGCACTGGGCCGAGCCGGACGGGCC +
Preference number: 3 (lower is better)
Translates to: ASRVGSGHVGLT*AAQALGRAGRA
Trigger: GGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR GCA 72 bp CAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTaGCCGGCGCCTGCCGCCCGGGGCTGTTCCCTGCGG +
Preference number: 3 (lower is better)
Translates to: QKQHGGARTRCR*PAPAARGCSLR
Trigger: CCGCAGGGAACAGCCCCGGGCGGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR GCA 72 bp CGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTaGACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCT +
Preference number: 3 (lower is better)
Translates to: RLSQGGPKAAPG*TLGRGSFWGWP
Trigger: AGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
3UTR GCA 72 bp AGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCGGGCTCGACTCTGCGG +
Preference number: 3 (lower is better)
Translates to: RGPGRPRCSWTS*SARPTPGSTLR
Trigger: CCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
3UTR GCA 72 bp ACGGGTGGGCTCGGGGCACGTGGGCCTTACCTGAGCTaGTCAGGCACTGGGCCGAGCCGGACGGGCCGAGCC +
Preference number: 3 (lower is better)
Translates to: TGGLGARGPYLS*SGTGPSRTGRA
Trigger: GGCTCGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 72 bp GGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCG +
Preference number: 3 (lower is better)
Translates to: GRRRGPGRPRCS*TSCSARPTPGS
Trigger: CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
3UTR CCA 72 bp CGGGGCACGTGGGCCTTACCTGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCGAGCCGGACGGACAGG +
Preference number: 3 (lower is better)
Translates to: RGTWALPELLRH*AEPDGPSRTDR
Trigger: CCTGTCCGTCCGGCTCGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR GCA 72 bp CCTGCAGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCAGCACGGCCGACCCCG +
Preference number: 3 (lower is better)
Translates to: PAGRRRGPGRPR*SWTSCSARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCTGCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
3UTR GCA 72 bp TGCGGGTGGAGGCTCTGCGGAGGCAGGGCGGTGCAGTaGCCGGGGGAGGGGTCCGGACTGGAGCTGTGGACT +
Preference number: 3 (lower is better)
Translates to: CGWRLCGGRAVQ*PGEGSGLELWT
Trigger: AGTCCACAGCTCCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGCCTCCGCAGAGCCTCCACCCGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCC +
Preference number: 3 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCLQLDE*LSTADP
Trigger: GGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR TCA 72 bp CCGGCACCCAGCCCTCCTTGCCAGTGGTCGGGTCCCTaGCGTACCTGCAAGGGGCGAGGGTCAGCGGCAGCC +
Preference number: 3 (lower is better)
Translates to: PAPSPPCQWSGP*RTCKGRGSAAA
Trigger: GGCTGCCGCTGACCCTCGCCCCTTGCAGGTACGTCAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 72 bp GGCCCTTGGCAGCGTCACGGGTGGGCTCGGGGCACGTaGGCCTTACCTGAGCTGCTCAGGCACTGGGCCGAG +
Preference number: 3 (lower is better)
Translates to: GPWQRHGWARGT*ALPELLRHWAE
Trigger: CTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 72 bp CAGCTTCCTCGCCCGGGCCCTTGGCAGCGTCACGGGTaGGCTCGGGGCACGTGGGCCTTACCTGAGCTGCTC +
Preference number: 3 (lower is better)
Translates to: QLPRPGPWQRHG*ARGTWALPELL
Trigger: GAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CCA 72 bp AGGCCGCGCTACCCCTGCAGGTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGC +
Preference number: 3 (lower is better)
Translates to: RPRYPCRSEKGA*PPSLQLDELLS
Trigger: GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCTGCAGGGGTAGCGCGGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
3UTR-3UTR CAA 90 bp ACAGAAGAAAGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCTCCTCGCCCGGGCCCTaGGCAGCGTCACGGGTGGGC +
Preference number: 3 (lower is better)
Translates to: TEESKAVARCLSRTLGPASSPGP*AASRVG
Trigger: GCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGA...GGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR GCA 72 bp GCTTTGCGGCACAGACCGGCCTCTGCGGACCAGGGATaGCCTCCCAGGCCAGCCCTACAAGCACGGCTCTCG +
Preference number: 3 (lower is better)
Translates to: ALRHRPASADQG*PPRPALQARLS
Trigger: CGAGAGCCGTGCTTGTAGGGCTGGCCTGGGAGGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 72 bp CTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCAGAAGCAGCACGGTGG +
Preference number: 3 (lower is better)
Translates to: LRKQLHHGPRVP*KHRPEAEAARW
Trigger: CCACCGTGCTGCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR GCA 72 bp GCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTaGACAGTACATCAGGGACATCGCGGGACACAGCAC +
Preference number: 3 (lower is better)
Translates to: ARSCATRRRHRA*TVHQGHRGTQH
Trigger: GTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 72 bp CGCCGTCTGACAGAAGAAAGCAAAGCGGTTGCTCGGTaGCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGG +
Preference number: 3 (lower is better)
Translates to: RRLTEESKAVAR*LSRTLGPAHCR
Trigger: CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGTCAGACGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACT +
Preference number: 3 (lower is better)
Translates to: AGAGLSELWSAALVHATPALLRP*ARGSST
Trigger: AGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 72 bp CTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTaGACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGC +
Preference number: 3 (lower is better)
Translates to: LSWPWLLPPVAL*TLSSSREQTAR
Trigger: GCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 72 bp ATCACGCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTaGGAGACGGCGGTGGGGAGGGACAGGCGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: ITPPSRGHRLLF*ETAVGRDRRRG
Trigger: GCCTCTGCGCCTGTCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGCGTGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 72 bp CCTCGCTGCAGCAGCAGCAGCTGCTCCACACAGGTCTaGATCCGGCCACTGTCCCAGCAGCCTGAAAGCCGC +
Preference number: 3 (lower is better)
Translates to: PRCSSSSCSTQV*IRPLSQQPESR
Trigger: GCGGCTTTCAGGCTGCTGGGACAGTGGCCGGATGCAGACCTGTGTGGAGCAGCTGCTGCTGCTGCAGCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp ACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTaGGAGGGTAGCGTGAGGGGAATGCAGCCACGCCTG +
Preference number: 3 (lower is better)
Translates to: TLEVWPVTATSR*EGSVRGMQPRL
Trigger: CAGGCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 72 bp CCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTaGCTTCAACCCATGCTGGGCGGGGAGGCCGGGTCT +
Preference number: 3 (lower is better)
Translates to: PCRQPLGINALA*LQPMLGGEAGS
Trigger: AGACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR TCA 72 bp CACACAGGTCTGCATCCGGCCACTGTCCCAGCAGCCTaGAAGCCGCAGCCACTGGCAGGGAGCTGTGCACTG +
Preference number: 3 (lower is better)
Translates to: HTGLHPATVPAA*KPQPLAGSCAL
Trigger: CAGTGCACAGCTCCCTGCCAGTGGCTGCGGCTTTCAGGCTGCTGGGACAGTGGCCGGATGCAGACCTGTGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 72 bp CCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTaGGACGAGACGGAGGCACCGCGCCTGCACAGTACA +
Preference number: 3 (lower is better)
Translates to: PLWGGSHKGAQL*DETEAPRLHST
Trigger: TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 72 bp AGAGAAAGAAACTATGCAGAGGGCATCGCAACCCGATaGGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCA +
Preference number: 3 (lower is better)
Translates to: RERNYAEGIATR*GGGSGCRREGP
Trigger: TGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGCATAGTTTCTTTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
3UTR GCA 72 bp GCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTaGCGGCTTCTTTTCCGTCCCAACAATGACTTACCA +
Preference number: 3 (lower is better)
Translates to: ARCLSRTLGPAH*RLLFRPNNDLP
Trigger: TGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 72 bp CTAAAGAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTC +
Preference number: 3 (lower is better)
Translates to: LKRPRAPLSSGR*PEDPPLLRKQL
Trigger: GAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR CCA 72 bp CTATGGTGGATGGAGCTGCAGTGGATGACGCGGCTCTaGGAGACCTGTAGGATGCGGGTGGAGGCTCTGCGG +
Preference number: 3 (lower is better)
Translates to: LWWMELQWMTRL*ETCRMRVEALR
Trigger: CCGCAGAGCCTCCACCCGCATCCTACAGGTCTCCCAGAGCCGCGTCATCCACTGCAGCTCCATCCACCATAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 72 bp TCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGGTTaGTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCA +
Preference number: 3 (lower is better)
Translates to: SSSPSDRRKQSG*SVPEPHAGPCP
Trigger: TGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGTCAGACGGCGATGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 72 bp TGGCCACGTCTATCTGGCGTCTATCTGGCGTCTATCTaGCGAGGAGGCGCGGCATGGAGTCCAGGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: WPRLSGVYLASI*RGGAAWSPGWK
Trigger: CTTCCACCCTGGACTCCATGCCGCGCCTCCTCGCCAGATAGACGCCAGATAGACGCCAGATAGACGTGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 3 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCTGCCATTTTGGCTCTTaGTTAATCACGCCTCCTTCG +
Preference number: 3 (lower is better)
Translates to: PGQPYKHGSRGTAHATASCHFGS*LITPPS
Trigger: CGAAGGAGGCGTGATTAACAAAGAGCCAAAATGGCA...GGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 72 bp GGTGCAGTGAACTATGGTGGATGGAGCTGCAGTGGATaGCGCGGCTCTGGGAGACCTGTAGGATGCGGGTGG +
Preference number: 3 (lower is better)
Translates to: GAVNYGGWSCSG*RGSGRPVGCGW
Trigger: CCACCCGCATCCTACAGGTCTCCCAGAGCCGCGTCATCCACTGCAGCTCCATCCACCATAGTTCACTGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 72 bp CTGTGCTGCGATGGCATTTGTAAGAGCAGCCCCTGCTaGGCTGAGCGTACTGTCTGTGAGCAGCAGGGGCCG +
Preference number: 3 (lower is better)
Translates to: LCCDGICKSSPC*AERTVCEQQGP
Trigger: CGGCCCCTGCTGCTCACAGACAGTACGCTCAGCTCAGCAGGGGCTGCTCTTACAAATGCCATCGCAGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 72 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTaGACAGGACGCTGGGGTGAATGCTCAGGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: VGLPKCAPDEDV*TGRWGECSGLP
Trigger: GGGCAGGCCTGAGCATTCACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR GCA 72 bp CTGCGCACCCTCTGCGCTAGTGTAGGACTTCCCAAGTaGGCTCCTGACGAAGACGTTTGCACAGGACGCTGG +
Preference number: 3 (lower is better)
Translates to: LRTLCASVGLPK*APDEDVCTGRW
Trigger: CCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTACACTAGCGCAGAGGGTGCGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR CCA 72 bp CAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTaGTCCACGCCACACCCTGCAGAAACTGCATCTTTG +
Preference number: 3 (lower is better)
Translates to: QGQGSLSYGRQH*STPHPAETASL
Trigger: CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR CCA 72 bp AAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTaGGGTGAATGCTCAGGCCTGCCCCAAACCCCTGCA +
Preference number: 3 (lower is better)
Translates to: KCAPDEDVCTGR*GECSGLPQTPA
Trigger: TGCAGGGGTTTGGGGCAGGCCTGAGCATTCACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR CCA 72 bp CAGCGCGACCTCAAAGTGGGAGACAGGGCGGTAGCCTaGCTGGATTCTGGATCTGTTCTGGAGGCACAGCCA +
Preference number: 3 (lower is better)
Translates to: QRDLKVGDRAVA*LDSGSVLEAQP
Trigger: TGGCTGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCTACCGCCCTGTCTCCCACTTTGAGGTCGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp ACCTGGCCTCAAAGTGGACAACCTCGAGGCTGGACCTaGATGCGCCTAGCAGGGCGTCACCTATGTGGCCAA +
Preference number: 3 (lower is better)
Translates to: TWPQSGQPRGWT*MRLAGRHLCGQ
Trigger: TTGGCCACATAGGTGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGAGGTTGTCCACTTTGAGGCCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp CAGCAGACCTGGCCTCAAAGTGGACAACCTCGAGGCTaGACCTGGATGCGCCTAGCAGGGCGTCACCTATGT +
Preference number: 3 (lower is better)
Translates to: QQTWPQSGQPRG*TWMRLAGRHLC
Trigger: ACATAGGTGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGAGGTTGTCCACTTTGAGGCCAGGTCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp AACAGCACGACTGGCCACGTCTATCTGGCGTCTATCTaGCGTCTATCTGGCGAGGAGGCGCGGCATGGAGTC +
Preference number: 3 (lower is better)
Translates to: NSTTGHVYLASI*RLSGEEARHGV
Trigger: GACTCCATGCCGCGCCTCCTCGCCAGATAGACGCCAGATAGACGCCAGATAGACGTGGCCAGTCGTGCTGTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 72 bp AGCAGCCTGAAAGCCGCAGCCACTGGCAGGGAGCTGTaGACTGTCCTCCAGCATCCTCTGAAAACTCTGCCT +
Preference number: 3 (lower is better)
Translates to: SSLKAAATGREL*TVLQHPLKTLP
Trigger: AGGCAGAGTTTTCAGAGGATGCTGGAGGACAGTGCACAGCTCCCTGCCAGTGGCTGCGGCTTTCAGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp GGCCAAAGGAACTGGACGGAGAGGTGCAGTGAACTATaGTGGATGGAGCTGCAGTGGATGACGCGGCTCTGG +
Preference number: 3 (lower is better)
Translates to: GQRNWTERCSEL*WMELQWMTRLW
Trigger: CCAGAGCCGCGTCATCCACTGCAGCTCCATCCACCATAGTTCACTGCACCTCTCCGTCCAGTTCCTTTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGGGCACCCAGCCCTCCTaGCCAGTGGTCGGGTCCCTG +
Preference number: 3 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKGTQPS*PVVGSL
Trigger: CAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCC...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR GCA 72 bp TCCGTCCCAACAATGACTTACCATGTGCAAGCACAGTaGACTGCGGCCCTGGAAACCCCGACTGCTGAGACG +
Preference number: 3 (lower is better)
Translates to: SVPTMTYHVQAQ*TAALETPTAET
Trigger: CGTCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATGGTAAGTCATTGTTGGGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 72 bp GCAGCAGGGGCCGGTAGGGGAGGATTCTCCCATTTGTaGAGTTCAGTTAGAGCTCTCCAGGGTCACGTCAAC +
Preference number: 3 (lower is better)
Translates to: AAGAGRGGFSHL*SSVRALQGHVN
Trigger: GTTGACGTGACCCTGGAGAGCTCTAACTGAACTGCACAAATGGGAGAATCCTCCCCTACCGGCCCCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp CAAAGGAACTGGACGGAGAGGTGCAGTGAACTATGGTaGATGGAGCTGCAGTGGATGACGCGGCTCTGGGAG +
Preference number: 3 (lower is better)
Translates to: QRNWTERCSELW*MELQWMTRLWE
Trigger: CTCCCAGAGCCGCGTCATCCACTGCAGCTCCATCCACCATAGTTCACTGCACCTCTCCGTCCAGTTCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 3 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCTGACACGCACAACCTaGTTGCTATTTTGTCATCAT +
Preference number: 3 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVLTRTT*LLFCHH
Trigger: ATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAG...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTGCCTGCGCCCAGGCTTaGCGGCACAGACCGGCCTCT +
Preference number: 3 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSACAQA*RHRPAS
Trigger: AGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGC...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 72 bp GAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTaGTTCCGCACCCTGGAGGTCTGGCCAGTGACGGCT +
Preference number: 3 (lower is better)
Translates to: EEKLPSLCMLPI*FRTLEVWPVTA
Trigger: AGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 72 bp AGCACAGTGCACTGCGGCCCTGGAAACCCCGACTGCTaGGACGTTCTGTGTCTTGACAGACAAAGGCAGATG +
Preference number: 3 (lower is better)
Translates to: STVHCGPGNPDC*DVLCLDRQRQM
Trigger: CATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCACTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp ACAGAAGAAAGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 3 (lower is better)
Translates to: TEESKAVARCLSRTLGPADKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...GGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATGCCGACTGCCAACTTaGCTGTGTTTTGAGCTTTAT +
Preference number: 3 (lower is better)
Translates to: SLPWLCARCPVLESRLPACRLPT*LCFELY
Trigger: ATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGCA...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 72 bp ATAAAATCAGACACCACTAAGCTGTCGACACCAATCTaGGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: IKSDTTKLSTPI*AGRGCSLPWLC
Trigger: ACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTGTCGACAGCTTAGTGGTGTCTGATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 72 bp GAGAAACACCTCAACAAACTGGCATCTGAGGAAGACTaGCGGCGACAGCTGGGGAACGTCCCAGGTAAGGGA +
Preference number: 3 (lower is better)
Translates to: EKHLNKLASEED*RRQLGNVPGKG
Trigger: TCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAGATGCCAGTTTGTTGAGGTGTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 72 bp TCGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTaGCATTTTGGCTCTTTGTTAATCACGCCTCCTTCG +
Preference number: 3 (lower is better)
Translates to: SRNSPRHGLHTV*HFGSLLITPPS
Trigger: CGAAGGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp CAGCCCACGCCACGGCCTCCACACAGTTTGCCATTTTaGCTCTTTGTTAATCACGCCTCCTTCGAGAGGTCA +
Preference number: 3 (lower is better)
Translates to: QPTPRPPHSLPF*LFVNHASFERS
Trigger: TGACCTCTCGAAGGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp ACAAACTGGCATCTGAGGAAGACTGACGGCGACAGCTaGGGAACGTCCCAGGTAAGGGAGTCAGAAGAGTTG +
Preference number: 3 (lower is better)
Translates to: TNWHLRKTDGDS*GTSQVRESEEL
Trigger: CAACTCTTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAGATGCCAGTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 72 bp ATCAGGGAAAGAGAAACACCTCAACAAACTGGCATCTaGGGAAGACTGACGGCGACAGCTGGGGAACGTCCC +
Preference number: 3 (lower is better)
Translates to: IRERETPQQTGI*GRLTATAGERP
Trigger: GGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAGATGCCAGTTTGTTGAGGTGTTTCTCTTTCCCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR GCA 72 bp CTCTGGCAAAAAGAAGCTGCTGCATTGAAATTTAGCTaGTCCCTTGACTCCAGGACCCTCCTGCCACTCCCG +
Preference number: 3 (lower is better)
Translates to: LWQKEAAALKFS*SLDSRTLLPLP
Trigger: CGGGAGTGGCAGGAGGGTCCTGGAGTCAAGGGAGCAGCTAAATTTCAATGCAGCAGCTTCTTTTTGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 72 bp TGGCTTCTAACTGCTTTTGGTGGTGGAGACACCACCTaGTGTCACCCACGGACACGTTTTCATCCACCTGTG +
Preference number: 3 (lower is better)
Translates to: WLLTAFGGGDTT*CHPRTRFHPPV
Trigger: CACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR GCA 72 bp CTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATaGTTCCTATTTGATTCCGCACCCTGGAGGTCTGGC +
Preference number: 3 (lower is better)
Translates to: LTHQRKSCRVSA*FLFDSAPWRSG
Trigger: GCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACT +
Preference number: 3 (lower is better)
Translates to: PNNLHIRGKAAESLHASYALLRP*ARGSST
Trigger: AGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGCAGTTCTGCTGTGACTaGAATAAAATACTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLQFCCD*NKILSP
Trigger: TGGGGAGAGTATTTTATTCAAGTCACAGCAGAACTG...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 72 bp CTCCCTTTTCTGGTCTGGAGAGTGTCGGCTGCATTGTaGTTCTGTAATGGTTCCACTACGCTTCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: LPFLVWRVSAAL*FCNGSTTLPLL
Trigger: CAGCAGAGGAAGCGTAGTGGAACCATTACAGAATCACAATGCAGCCGACACTCTCCAGACCAGAAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 72 bp GAACGACACGCAGTAGCCACTGTTCCTCAGCAGCCATaGGGTGGGCAGAAACACACACATGCTTCTAAAACA +
Preference number: 3 (lower is better)
Translates to: ERHAVATVPQQP*GGQKHTHASKT
Trigger: TGTTTTAGAAGCATGTGTGTGTTTCTGCCCACCTCATGGCTGCTGAGGAACAGTGGCTACTGCGTGTCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 3 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 3 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp GTTTACTCGGAGCTGATGAAATCCAGAGATGTCATACGAAATGCATGTAGAGTTTCGAGAGGTCACCGCTaGCTGTTCTGCGAGACGGCG +
Preference number: 3 (lower is better)
Translates to: VYSELMKSRDVIRNACRVSRGHR*LFCETA
Trigger: CGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGA...AACTCTACATGCATTTCGTATGACATCTCTGGATTTCATCAGCTCCGAGTAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp AGTGGGCCAAAAAGTCCAAAGCCTCTACAGTTTGGAGACATCACAGCTGACTGCCGGCCTCCACACAGTTaGCCATTTTGGCTCTTTGTT +
Preference number: 3 (lower is better)
Translates to: SGPKSPKPLQFGDITADCRPPHS*PFWLFV
Trigger: AACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCG...GCAGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTGGACTTTTTGGCCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CCA 72 bp AAACCTGACTGGAATAAGACCTTGAAACAGCACGACTaGCCACGTCTATCTGGCGTCTATCTGGCGTCTATC +
Preference number: 3 (lower is better)
Translates to: KPDWNKTLKQHD*PRLSGVYLASI
Trigger: GATAGACGCCAGATAGACGCCAGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 3 (lower is better)
Translates to: GKAAESLHASYLIPHPGGDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 72 bp GGTTCCACTACGCTTCCTCTGCTGCCTTTGCGTTTCTaGCACGCACAACCTTGTTGCTATTTTGTCATCATC +
Preference number: 3 (lower is better)
Translates to: GSTTLPLLPLRF*HAQPCCYFVII
Trigger: GATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 72 bp ATTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTaGATCCCATTTCAGGTCATCGATACTGCTACACCA +
Preference number: 3 (lower is better)
Translates to: IATQPPLLYELS*IPFQVIDTATP
Trigger: TGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR TCA 72 bp ATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTaGGCACTACCTGCATCCAAGTTGATAGACCCGCTG +
Preference number: 3 (lower is better)
Translates to: ILLVIRLSSKCH*ALPASKLIDPL
Trigger: CAGCGGGTCTATCAACTTGGATGCAGGTAGTGCTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR GCA 72 bp TGTGATTCTGTAATGGTTCCACTACGCTTCCTCTGCTaGCTTTGCGTTTCTGACACGCACAACCTTGTTGCT +
Preference number: 3 (lower is better)
Translates to: CDSVMVPLRFLC*LCVSDTHNLVA
Trigger: AGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGGAACCATTACAGAATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTAGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 3 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGCTGCATGCTTCCTATTaGATTCCGCACCCTGGAGGT +
Preference number: 3 (lower is better)
Translates to: TTLLLFCHHRRLTEESKALHASY*IPHPGG
Trigger: ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAG...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CCAGAGATGTCATACGAAATGCATGTAGAGTTTGATAGGAAAACCTCATCGTGTAATTTAGCTGCTCCCTaGACTCCAGGACCCTCCTGC +
Preference number: 3 (lower is better)
Translates to: PEMSYEMHVEFDRKTSSCNLAAP*TPGPSC
Trigger: GCAGGAGGGTCCTGGAGTCAAGGGAGCAGCTAAATT...ACACGATGAGGTTTTCCTATCAAACTCTACATGCATTTCGTATGACATCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 72 bp CTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTaGGTTAGAAACAAGCTTTTAAATTGCCAAACAGTG +
Preference number: 3 (lower is better)
Translates to: LSSSREQTARIP*VRNKLLNCQTV
Trigger: CACTGTTTGGCAATTTAAAAGCTTGTTTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 72 bp TCTGTAATGGTTCCACTACGCTTCCTCTGCTGCCTTTaGGTTTCTGACACGCACAACCTTGTTGCTATTTTG +
Preference number: 3 (lower is better)
Translates to: SVMVPLRFLCCL*VSDTHNLVAIL
Trigger: CAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGGAACCATTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR GCA 72 bp CATTGTGATTCTGTAATGGTTCCACTACGCTTCCTCTaGTGCCTTTGCGTTTCTGACACGCACAACCTTGTT +
Preference number: 3 (lower is better)
Translates to: HCDSVMVPLRFL*CLCVSDTHNLV
Trigger: AACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGGAACCATTACAGAATCACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTGAGACGTTCTGTGTCTaGACAGACAAAGGCAGATGG +
Preference number: 3 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSETFCV*TDKGRW
Trigger: CCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTC...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTTCTCTAAGCAGTGACTaGTCACGTCTGATCCGATGC +
Preference number: 3 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSSLSSD*SRLIRC
Trigger: GCATCGGATCAGACGTGACAAGTCACTGCTTAGAGA...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp GAAGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACGACCAGATCTGGGTATaGAATGCCTTCCTGGCTGTA +
Preference number: 3 (lower is better)
Translates to: EELKVFICWHKRHQGKRNDQIWV*NAFLAV
Trigger: TACAGCCAGGAAGGCATTCAATACCCAGATCTGGTC...GTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR TCA 72 bp CTTTGCTGTGTTTTGAGCTTTATAGTCAGTGGCTTATaGGTTCCTGATTGCCACGCAGCCCCCTTTACTCTA +
Preference number: 3 (lower is better)
Translates to: LCCVLSFIVSGL*VPDCHAAPFTL
Trigger: TAGAGTAAAGGGGGCTGCGTGGCAATCAGGAACTCATAAGCCACTGACTATAAAGCTCAAAACACAGCAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 3 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTACACGCACAACCTTGTaGCTATTTTGTCATCATCGC +
Preference number: 3 (lower is better)
Translates to: MNCPESHFRSSILLHQLSTRTTL*LFCHHR
Trigger: GCGATGATGACAAAATAGCAACAAGGTTGTGCGTGT...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CCAGGGAGAATTATGATCTCAACAACTAAATCATTTCCAAACCCTTACTGCTGTCTTGAGGTCAAGAGCTaGAGACCAGCCTGGACAACA +
Preference number: 3 (lower is better)
Translates to: PGRIMISTTKSFPNPYCCLEVKS*RPAWTT
Trigger: TGTTGTCCAGGCTGGTCTCAAGCTCTTGACCTCAAG...ACAGCAGTAAGGGTTTGGAAATGATTTAGTTGTTGAGATCATAATTCTCCCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
3UTR TCA 72 bp TGTTTTGAGCTTTATAGTCAGTGGCTTATGAGTTCCTaGTTGCCACGCAGCCCCCTTTACTCTATGAACTGT +
Preference number: 3 (lower is better)
Translates to: CFELYSQWLMSS*LPRSPLYSMNC
Trigger: ACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAATCAGGAACTCATAAGCCACTGACTATAAAGCTCAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 3 (lower is better)
Translates to: PNNLHIRGKAAESLHASYIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTAACCTTGTTGCTATTTaGTCATCATCGCCGTCTGAC +
Preference number: 3 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSNLVAI*SSSPSD
Trigger: GTCAGACGGCGATGATGACAAAATAGCAACAAGGTT...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTCAGACGCTTCCAGCATaGCTCGATTTTAACAATGAA +
Preference number: 3 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETQTLPA*LDFNNE
Trigger: TTCATTGTTAAAATCGAGCAATGCTGGAAGCGTCTG...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTCTGACACGCACAACCTaGTTGCTATTTTGTCATCAT +
Preference number: 3 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSLTRTT*LLFCHH
Trigger: ATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAG...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR-3UTR CAA 90 bp GTTTACTCGGAGCTGATGAAATCCAGAGATGTCATACGAAATGCATGTAGAGTTAAAGAAGCTGCTGCATaGAAATTTAGCTGCTCCCTT +
Preference number: 3 (lower is better)
Translates to: VYSELMKSRDVIRNACRVKEAAA*KFSCSL
Trigger: AAGGGAGCAGCTAAATTTCAATGCAGCAGCTTCTTT...AACTCTACATGCATTTCGTATGACATCTCTGGATTTCATCAGCTCCGAGTAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR-3UTR CAA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCCAGTTCTGCTGTGACTaGAATAAAATACTCTCCCCA +
Preference number: 3 (lower is better)
Translates to: ICRLDTERASKVLNRICFQFCCD*NKILSP
Trigger: TGGGGAGAGTATTTTATTCAAGTCACAGCAGAACTG...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
3UTR CAA 72 bp CCGGGCACACACGGGGCAGCTTCCTCGCCCGGGCCCTaGGCAGCGTCACGGGTGGGCTCGGGGCACGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGTHGAASSPGP*AASRVGSGHVG
Trigger: GCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTGCCCCGTGTGTGCCCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGTTGCTCGGTGCCTaGGCCGCACGCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPRLLGA*AARWAL
Trigger: CAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCG...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp GGAGGCTCTGCGGAGGCAGGGCGGTGCAGTGCCCGGGGGAGGGGTCCGGACTGGATCGCCGAGGGGCTGTaGCCATGGCCGTCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: GGSAEAGRCSARGRGPDWIAEGL*PWPSPP
Trigger: CGGAGGCGACGGCCATGGCCACAGCCCCTCGGCGAT...CCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGCCTCCGCAGAGCCTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 72 bp CCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTaGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PAVAGRAQGGSG*HARPRLLLGLA
Trigger: GGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGCAGGTGGAGGTCTGGCCAGTaGCGGCTACAAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QPQTARGSPAPRPRYPCRWRSGQ*RLQAAG
Trigger: CCCAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCA...CCTGCAGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp CGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCAGGCCGCGCTACCCCTaGAGGTCGGAGAAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLCGEIRRGRASASALPGRPRYP*RSEKGA
Trigger: GGCCCCCTTCTCCGACCTGCAGGGGTAGCGCGGCCT...GCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGACCGGGCTTCCGTCCTaGCCCCGCCCACCGGACAGG +
Preference number: 4 (lower is better)
Translates to: QGGPKAAPGCTLGRGSFWTGLPS*PRPPDR
Trigger: CCTGTCCGGTGGGCGGGGGCAGGACGGAAGCCCGGT...CCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGACCGGGCTTCCGTCCTaGCCCCGCCCACCGGACAGG +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQTGLPS*PRPPDR
Trigger: CCTGTCCGGTGGGCGGGGGCAGGACGGAAGCCCGGT...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCCAGAGCCTCGCCGAATaGCTGGGGAGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RLCGEIRRGRASASALPGQSLAE*LGRGRA
Trigger: CGCCCTGCCCCTCCCCAGGCATTCGGCGAGGCTCTG...GCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCGGGGCGCGTGGGGAGTaGAGTGGAGGTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCGARGE*SGGAAS
Trigger: GGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGCAGGGCCTCCGCGCCGTCCTaGGACTGGCACTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: QPQTARGSPAPRPRYPCRASAPS*DWHLST
Trigger: TGTGGACAAGTGCCAGTCCCAGGACGGCGCGGAGGC...CCTGCAGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGCGTGGGTCCGTGGCTaGCCGGGGATGGACCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAAWVRG*PGMDQP
Trigger: GGGCTGGTCCATCCCCGGCCAGCCACGGACCCACGC...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397030.5
3UTR CAA 72 bp AAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCG +
Preference number: 4 (lower is better)
Translates to: KGAWPPSLQLDE*LSTADPGLDSA
Trigger: CGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CAGGGTCAGGAACGGGGATCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGGCCGGTCCTGGCATCTaGGGTGCCCGTGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: QGQERGSAAARGREVPWGAGPGI*GARAGP
Trigger: TGGACCAGCACGGGCACCTCAGATGCCAGGACCGGC...CCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGGATCCCCGTTCCTGACCCTG
73% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR GCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLGRLCD*SSARCW
Trigger: CCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCC...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGGCCGCGCTACCCCTaGAGGTCGGAGAAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCRPRYP*RSEKGA
Trigger: GGCCCCCTTCTCCGACCTGCAGGGGTAGCGCGGCCT...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCGGCCTCCGAGGAGGCTaGAGTGCAGTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPGLRGG*SAVRQG
Trigger: CCCCTGCCTCACTGCACTGCAGCCTCCTCGGAGGCC...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CCGGGCACACACGGGGCAGCTTCCTCGCCCGGGCCCTTGGCAGCGTCACGGGTGGGAGTGGAGTGGAGGTaGGGCCTCCGAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGTHGAASSPGPLAASRVGVEWR*GLRGGC
Trigger: GCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCC...CACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTGCCCCGTGTGTGCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCGGGGCAGGGCGACTTTaGCAGTGCCTCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRGAGRL*QCLGSG
Trigger: CCCAGACCCGAGGCACTGGCAAAGTCGCCCTGCCCC...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACCAGAGCCTCGCCGAATaGCTGGGGAGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDQSLAE*LGRGRA
Trigger: CGCCCTGCCCCTCCCCAGGCATTCGGCGAGGCTCTG...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACCTTCGGCGTCGGCTCTaGCGGGCACACACGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDLRRRL*RAHTGQ
Trigger: CTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAG...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCTTGAGGGACTGGTGCTaGTCGGGGCCGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RLCGEIRRGRASASALPGLRDWC*SGPAGA
Trigger: TGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTCAA...GCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPELLRH*AEPDGP
Trigger: CGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTC...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAELLRH*AEPDGP
Trigger: CGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTC...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGSEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDSEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCGCGTGGGGAGTGGAGTaGAGGTGCGGCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLAWGVE*RCGLRG
Trigger: TCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGC...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCGCACCAGCACCATCTTaGCCGCGAAGCGGGGACGCC +
Preference number: 4 (lower is better)
Translates to: AQGGSGLHARPRLLLGLAAPAPS*PRSGDA
Trigger: GGCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGC...GGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGTCGATGGCCGTGCGCTaGCACAGCCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: DAEAGPAVAGRAQGGSGLSMAVR*HSHREW
Trigger: CCACTCCCGGTGGCTGTGCCAGCGCACGGCCATCGA...CAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGTCGATGGCCGTGCGCTaGCACAGCCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSSMAVR*HSHREW
Trigger: CCACTCCCGGTGGCTGTGCCAGCGCACGGCCATCGA...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTTCGATGGCCGTGCGCTaGCACAGCCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPSMAVR*HSHREW
Trigger: CCACTCCCGGTGGCTGTGCCAGCGCACGGCCATCGA...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACCGGGCCGCGTCTGCCTaGCCGCCAGCTTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDRAASA*PPASSG
Trigger: GCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCG...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCCTCGCCGAATGCCTaGGGAGGGGCAGGGCGACTT +
Preference number: 4 (lower is better)
Translates to: RCGGGSGCRREGPRRLRVASPNA*GGAGRL
Trigger: AAGTCGCCCTGCCCCTCCCCAGGCATTCGGCGAGGC...AACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGATGGCAGCGTCACGGGTaGGCTCGGGGCACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: EGGLAALAAAGRVAQHGRWQRHG*ARGTWA
Trigger: GGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCA...TCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCTCGCCCGGGCCCTTaGCAGCGTCACGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: EGGLAALAAAGRVAQHGRPRPGP*QRHGWA
Trigger: AGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGG...TCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGGCTGGGAGGGTAGCGTaGGGGGAATGCAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQAGRVA*GECSHA
Trigger: GGCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGC...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGGTCCCGGCACAGCAGTaGCAGCCGGCGCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: GGSGLHARPRLLLGLALLVPAQQ*QPAHRH
Trigger: ATGACGGTGCGCCGGCTGTCACTGCTGTGCCGGGAC...CAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCGGTTGCTCGGTGCCTaGGCCGCACGCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLRLLGA*AARWAL
Trigger: CAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCG...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCCACGTGGGCCTTACCTaGGCTGCTCAGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: PGRPRCSWTSCSARPTPGHVGLT*AAQALG
Trigger: GCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTG...GCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGACGGACAGGCTaGTGGCCGGCACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTAGRTG*WPAPSP
Trigger: AGGGCTGGGTGCCGGCCAGCAGCCTGTCCGTCCGGC...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: RLCGEIRRGRASASALPGCSWTS*SARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCA...GCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCCCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PGRPRCSWTSCSARPTPGPGRPR*SWTSCS
Trigger: TGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG...GCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGACCGGGCTTCCGTCCTaGCCCCGCCCACCGGACAGG +
Preference number: 4 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRTGLPS*PRPPDR
Trigger: CCTGTCCGGTGGGCGGGGGCAGGACGGAAGCCCGGT...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp CGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTGGGCCAGGAGCCTCTaGACGGTGGCCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RLSQGGPKAAPGCTLGRGWARSL*TVAWLS
Trigger: TGACAACCAGGCCACCGTGCAGAGGCTCCTGGCCCA...GCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp AGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCGTCTCCAGGCGGCGGTaGAGCTCCAGGGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: RRGRASASALPGTHGAASVSRRR*SSRDLL
Trigger: CAGCAAGTCCCTGGAGCTGCACCGCCGCCTGGAGAC...GGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp ACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACGGGGCAGGGCGACTTTaGCAGTGCCTCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TLRGDQAGTGFGVGSAGHGAGRL*QCLGSG
Trigger: CCCAGACCCGAGGCACTGGCAAAGTCGCCCTGCCCC...GTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGCTGAGCCGCGGCCCTaGCGGCTCTCACTCATCTCA +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSAEPRP*RLSLIS
Trigger: TGAGATGAGTGAGAGCCGGCAGGGCCGCGGCTCAGC...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTGAGCTCAGCGCCTCCTaGAGGTCCTCAGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PKAAPGCTLGRGSFWGWPELSAS*RSSAPS
Trigger: CGAGGGGGCTGAGGACCTGCAGGAGGCGCTGAGCTC...AGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGGAGCTCAGCGCCTCCTaGAGGTCCTCAGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGELSAS*RSSAPS
Trigger: CGAGGGGGCTGAGGACCTGCAGGAGGCGCTGAGCTC...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACTTCGGCGTCGGCTCTaGCGGGCACACACGGGGCAG +
Preference number: 4 (lower is better)
Translates to: EGGLAALAAAGRVAQHGRLRRRL*RAHTGQ
Trigger: CTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAG...TCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTTCGGCGTCGGCTCTaGCGGGCACACACGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTLRRRL*RAHTGQ
Trigger: CTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAG...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGELLRH*AEPDGP
Trigger: CGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTC...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGCAGGGGTCCTGGTTCACACTaGGCTCTGAGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QPQTARGSPAPRPRYPCRGPGSH*ALSPQP
Trigger: AGGCTGAGGGCTCAGAGCCCAGTGTGAACCAGGACC...CCTGCAGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp CACCGCAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGAGCTCCTGGCACTTTaGGCGGATGGAGTCTACCGC +
Preference number: 4 (lower is better)
Translates to: HRSPRQRAGLRRRGRATPELLAL*ADGVYR
Trigger: GCGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTC...AGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTGCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCGGGCCCTTGGCAGCGTCACGGGTGGGCTCGGGGCACGTGGGCCTTACCTGAGGCCTCGCCGAATGCCTaGGGAGGGGCAGGGCGACTT +
Preference number: 4 (lower is better)
Translates to: PGPWQRHGWARGTWALPEASPNA*GGAGRL
Trigger: AAGTCGCCCTGCCCCTCCCCAGGCATTCGGCGAGGC...CTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCCACCGCCCTCGGAGCTaGAGTTCTCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RRVRLSQGGPKAAPGCTLHRPRS*SSQSLA
Trigger: GGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTG...GAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp CACCGCAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTAGTGCACTGCGGCCCTaGAAACCCCGACTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: HRSPRQRAGLRRRGRATPSALRP*KPRLLR
Trigger: TCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCACT...AGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTGCGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGCCTCGCCCGGGCCCTTaGCAGCGTCACGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTPRPGP*QRHGWA
Trigger: AGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGG...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTAGGGGCAGGGCTCTCTaGGCTATGGTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPRGRAL*AMVGST
Trigger: AGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCT...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCAGGGGCAGGGCTCTCTaGGCTATGGTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLRGRAL*AMVGST
Trigger: AGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCT...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGGGAACCGTGAGGCTGTaGGGCGGCCCTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLGTVRL*GGPPSS
Trigger: GCTGCTGGGAGGGCCGCCTCACAGCCTCACGGTTCC...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGGAACCGTGAGGCTGTaGGGCGGCCCTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSGTVRL*GGPPSS
Trigger: GCTGCTGGGAGGGCCGCCTCACAGCCTCACGGTTCC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCCTCCACGGCCACGCCTaGTTTCTCCTCGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLLHGHA*FLLEAG
Trigger: GCCAGCTTCGAGGAGAAATCAGGCGTGGCCGTGGAG...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGTGGGGCTGGCCTTGCTaGTGCAGGGGTGCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: DAEAGPAVAGRAQGGSGLWGWPC*CRGAEQ
Trigger: TTGCTCTGCACCCCTGCATCAGCAAGGCCAGCCCCA...CAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCCACGTGGGCCTTACCTaGGCTGCTCAGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSAHVGLT*AAQALG
Trigger: GCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTG...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGCTCTTGAGGGACTGGTaGTGGTCGGGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPLLRDW*WSGPAG
Trigger: CCCTGCCGGCCCCGACCAGCACCAGTCCCTCAAGAG...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGCCGGACGGACAGGCTaGTGGCCGGCACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSAGRTG*WPAPSP
Trigger: AGGGCTGGGTGCCGGCCAGCAGCCTGTCCGTCCGGC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDCSWTS*SARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCA...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCCCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCPGRPR*SWTSCS
Trigger: TGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTAACTTTCGATGGCCGTaGGCTGGCACAGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: RCGGGSGCRREGPRRLRVNFRWP*AGTATG
Trigger: CCCGGTGGCTGTGCCAGCGCACGGCCATCGAAAGTT...AACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCACCTCCCGGAAGCCCTaGTCAAAGTGCCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPTSRKP*SKCRSC
Trigger: GCAGCTCCGGCACTTTGAGCAGGGCTTCCGGGAGGT...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp CGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCAGCAGGTGCTCCACATaGGCCAGGCTGTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: RLSQGGPKAAPGCTLGRGSRCST*ARLLPM
Trigger: CATCGGCAACAGCCTGGCGCATGTGGAGCACCTGCT...GCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGAGGTCCCTCAGCAGGTaGTCCACATGCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSRSLSR*STCARL
Trigger: CAGCCTGGCGCATGTGGAGCACCTGCTGAGGGACCT...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGTCTCCAGGCGGCGGTaGAGCTCCAGGGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: EGPRRLRVARSAEAPSGAVSRRR*SSRDLL
Trigger: CAGCAAGTCCCTGGAGCTGCACCGCCGCCTGGAGAC...AGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGTCTCCAGGCGGCGGTaGAGCTCCAGGGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAVSRRR*SSRDLL
Trigger: CAGCAAGTCCCTGGAGCTGCACCGCCGCCTGGAGAC...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCTCAGGCTGGCCTGCCTaGGGTGGAACACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RLCGEIRRGRASASALPGSGWPA*GGTPPP
Trigger: TGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGA...GCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGATGCACGGGCCGCGTCTaGCTGGCCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EGGLAALAAAGRVAQHGRCTGRV*LAASFF
Trigger: GAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCA...TCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGTGCACGGGCCGCGTCTaGCTGGCCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGCTGRV*LAASFF
Trigger: GAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCA...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCTGCACGGGCCGCGTCTaGCTGGCCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGCTGRV*LAASFF
Trigger: GAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCA...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGGGGCAGGGCGACTTTaGCAGTGCCTCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPGAGRL*QCLGSG
Trigger: CCCAGACCCGAGGCACTGGCAAAGTCGCCCTGCCCC...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGAGCTCAGCGCCTCCTaGAGGTCCTCAGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPELSAS*RSSAPS
Trigger: CGAGGGGGCTGAGGACCTGCAGGAGGCGCTGAGCTC...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCGGCATCGCAACCCGATaGGGAGGCGGGTCCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KAAPGCTLGRGSFWGWPCGIATR*GGGSGC
Trigger: ACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCC...GCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CACCGCAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTAGAAAGCAAAGCGGTTaGTCGGTGCCTGAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: HRSPRQRAGLRRRGRATPRKQSG*SVPEPH
Trigger: GTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCT...AGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTGCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGCGCCCGGTGCTGGCTaGCTTCTCTACAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSAPGAG*LLYKPA
Trigger: TGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGC...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGTTGAGGGACTGGTGCTaGTCGGGGCCGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGLRDWC*SGPAGA
Trigger: TGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTCAA...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTTTGAGGGACTGGTGCTaGTCGGGGCCGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTLRDWC*SGPAGA
Trigger: TGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTCAA...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCTGGAACCAGCTTCTTaGGGCCCAACCCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPLEPAS*GPTRRP
Trigger: AGGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAG...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTAT +
Preference number: 4 (lower is better)
Translates to: RRGRASASALPGTHGAASGPPFS*SATTVY
Trigger: ATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCC...GGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCAGGTGCCGGAGCTCCTaGCACTTTGGGCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RLCGEIRRGRASASALPGRCRSS*HFGRME
Trigger: CTCCATCCGCCCAAAGTGCCAGGAGCTCCGGCACCT...GCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGCCTCCGCGCCGTCCTaGGACTGGCACTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ASQPDAEAGPAVAGRAQGASAPS*DWHLST
Trigger: TGTGGACAAGTGCCAGTCCCAGGACGGCGCGGAGGC...GCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp TCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGCGGGCCGCGTCTGCCTaGCCGCCAGCTTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: SLQLDELLSTADPGLDSARAASA*PPASSG
Trigger: GCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCG...CGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTGCCTCGCCGAATGCCTaGGGAGGGGCAGGGCGACTT +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTASPNA*GGAGRL
Trigger: AAGTCGCCCTGCCCCTCCCCAGGCATTCGGCGAGGC...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCCACCGCCCTCGGAGCTaGAGTTCTCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: WPPSLQLDELLSTADPGLHRPRS*SSQSLA
Trigger: GGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTG...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCAGGTCCGTGGGTCGCTaGGTCCATGCGTGGGTCCGT +
Preference number: 4 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSARSVGR*VHAWVR
Trigger: ACGGACCCACGCATGGACCCAGCGACCCACGGACCT...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCCAGTGGTCGGGTCCCTaGCGTACCAGAGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAQWSGP*RTRGPR
Trigger: ACGAGGGCCTCTGGTACGTCAGGGACCCGACCACTG...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCCCCCGGGCTCGACTCTaGGCTGCTCAGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSPRARL*AAQALG
Trigger: GCCCAGTGCCTGAGCAGCTCAGAGTCGAGCCCGGGG...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACAGGAACCGTGAGGCTGTaGGGCGGCCCTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HKGAQLCDETEAPRLHSTGTVRL*GGPPSS
Trigger: GCTGCTGGGAGGGCCGCCTCACAGCCTCACGGTTCC...TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTGTCCGGAATCTCGCTaGAGGCCGGGTAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RRGRASASALPGTHGAASCPESR*RPGSQG
Trigger: TCCCTGACTACCCGGCCTTCAGCGAGATTCCGGACA...GGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp CCGGGCACACACGGGGCAGCTTCCTCGCCCGGGCCCTTGGCAGCGTCACGGGTGTGTCCGGAATCTCGCTaGAGGCCGGGTAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PGTHGAASSPGPLAASRVCPESR*RPGSQG
Trigger: TCCCTGACTACCCGGCCTTCAGCGAGATTCCGGACA...CACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTGCCCCGTGTGTGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp CAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGCTCCACGGCCACGCCTaGTTTCTCCTCGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: QGGPKAAPGCTLGRGSFWLHGHA*FLLEAG
Trigger: GCCAGCTTCGAGGAGAAATCAGGCGTGGCCGTGGAG...CCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGGRLCD*SSARCW
Trigger: CCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCC...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCTCTTGAGGGACTGGTaGTGGTCGGGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRLLRDW*WSGPAG
Trigger: CCCTGCCGGCCCCGACCAGCACCAGTCCCTCAAGAG...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCCCCTCGTCGCCCTCCTaGACCAGCTCCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGPSSPS*TSSTTS
Trigger: GGACGTGGTGGAGCTGGTGCAGGAGGGCGACGAGGG...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTGCCGGACGGACAGGCTaGTGGCCGGCACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSAGRTG*WPAPSP
Trigger: AGGGCTGGGTGCCGGCCAGCAGCCTGTCCGTCCGGC...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGCSWTS*SARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCA...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGCCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGPGRPR*SWTSCS
Trigger: TGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCAGGCCGCGCTACCCCTaGAGGTCGGAGAAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSRPRYP*RSEKGA
Trigger: GGCCCCCTTCTCCGACCTGCAGGGGTAGCGCGGCCT...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGGGAGTGGAGTGGAGGTaGGGCCTCCGAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLGVEWR*GLRGGC
Trigger: GCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCC...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGCCGGCGCACCGTCATaGTGCCCAGTGCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RVARSAEAPSGAGLADAGAGAPS*CPVRVR
Trigger: CCTGACTCGCACTGGGCAGCATGACGGTGCGCCGGC...CCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGGCCGGCGCACCGTCATaGTGCCCAGTGCGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLAGAPS*CPVRVR
Trigger: CCTGACTCGCACTGGGCAGCATGACGGTGCGCCGGC...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR GCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACCGGGCTTCCGTCCTaGCCCCGCCCACCGGACAGG +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHATGLPS*PRPPDR
Trigger: CCTGTCCGGTGGGCGGGGGCAGGACGGAAGCCCGGT...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAAGGTCCCTCAGCAGGTaGTCCACATGCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSARSLSR*STCARL
Trigger: CAGCCTGGCGCATGTGGAGCACCTGCTGAGGGACCT...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCCAGCCCCCTCCTCCTTaGGATCTCCGCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: RRVRLSQGGPKAAPGCTLQPPPP*DLRREL
Trigger: CAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTG...GAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGCAGCCCCCTCCTCCTTaGGATCTCCGCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSQPPPP*DLRREL
Trigger: CAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTG...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTTCAGGCTGGCCTGCCTaGGGTGGAACACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RREGPRRLRVARSAEAPSSGWPA*GGTPPP
Trigger: TGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGA...AGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCAGGCTGGCCTGCCTaGGGTGGAACACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDSGWPA*GGTPPP
Trigger: TGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGA...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCCAGAGCCTCGCCGAATaGCTGGGGAGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPQSLAE*LGRGRA
Trigger: CGCCCTGCCCCTCCCCAGGCATTCGGCGAGGCTCTG...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGGCTGAGCCGCGGCCCTaGCGGCTCTCACTCATCTCA +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARAEPRP*RLSLIS
Trigger: TGAGATGAGTGAGAGCCGGCAGGGCCGCGGCTCAGC...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGAGGAACAGGTGCCGCTaGATGGGCTTGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSRNRCR*MGLNLA
Trigger: GGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCT...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCAGCACTGCCTTCTCGTaGAGGAACAGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RRVRLSQGGPKAAPGCTLSTAFS*RNRCRC
Trigger: GCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCT...GAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCAGCACTGCCTTCTCGTaGAGGAACAGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: PGRPRCSWTSCSARPTPGSTAFS*RNRCRC
Trigger: GCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCT...GCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGGGGCCTTACCTGAGCTaGTCAGGCACTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGGPYLS*SGTGPS
Trigger: GCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCC...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
70% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCACTCCAGGACCCTCCTaGCACTCCCGTGCCTGCGCC +
Preference number: 4 (lower is better)
Translates to: PGQPYKHGSRGTAHATASTPGPS*HSRACA
Trigger: GGCGCAGGCACGGGAGTGGCAGGAGGGTCCTGGAGT...GGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp GGAGGCTCTGCGGAGGCAGGGCGGTGCAGTGCCCGGGGGAGGGGTCCGGACTGGACTGGCAGGGAGCTGTaGACTGTCCTCCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: GGSAEAGRCSARGRGPDWTGREL*TVLQHP
Trigger: AGGATGCTGGAGGACAGTGCACAGCTCCCTGCCAGT...CCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGCCTCCGCAGAGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACATCCAGCGCCCGGTGCTaGCTGGCTTCTCTACAAGCC +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTSSARC*LASLQA
Trigger: GGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGA...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGTTGAGGGACTGGTGCTaGTCGGGGCCGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RVARSAEAPSGAGLADAGLRDWC*SGPAGA
Trigger: TGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTCAA...CCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp CAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCTTCCTCTTGAGGGACTaGTGCTGGTCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: QRASQPDAEAGPAVAGRAFLLRD*CWSGPA
Trigger: TGCCGGCCCCGACCAGCACCAGTCCCTCAAGAGGAA...GGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCTTCCTCTTGAGGGACTaGTGCTGGTCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCFLLRD*CWSGPA
Trigger: TGCCGGCCCCGACCAGCACCAGTCCCTCAAGAGGAA...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTAT +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCGPPFS*SATTVY
Trigger: ATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCC...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: PCPALLRPLARGSSTSPEELLRH*AEPDGP
Trigger: CGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTC...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHAELLRH*AEPDGP
Trigger: CGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTC...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSSEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGAAGGTGGTCACCAGGTaGCAGGTGGACCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQKVVTR*QVDLGG
Trigger: CCCACCCAGGTCCACCTGCCACCTGGTGACCACCTT...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCCGCACCCTGGAGGTCTaGCCAGTGACGGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCRTLEV*PVTATS
Trigger: GCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCG...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCGGTCCTGGTTCACACTaGGCTCTGAGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRGPGSH*ALSPQP
Trigger: AGGCTGAGGGCTCAGAGCCCAGTGTGAACCAGGACC...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACAGGTGCCGGAGCTCCTaGCACTTTGGGCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDRCRSS*HFGRME
Trigger: CTCCATCCGCCCAAAGTGCCAGGAGCTCCGGCACCT...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCGCGCCGTCCTGGGACTaGCACTTGTCCACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPAPSWD*HLSTGC
Trigger: ACAACCTGTGGACAAGTGCCAGTCCCAGGACGGCGC...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCCCAGCTTCTTCAGGCTaGCCTGCCTGCGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLPASSG*PACGGT
Trigger: TGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGG...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCACGGGCCGCGTCTGCCTaGCCGCCAGCTTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: LRVARSAEAPSGAGLADARAASA*PPASSG
Trigger: GCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCG...TGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCCGTGCCTGCGCAGGATaGCCAGGCTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSARACAG*PGFPPP
Trigger: AGGAGGAGGAAAGCCTGGCCATCCTGCGCAGGCACG...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCGTGTGGCCCCTCTTGTaGTCGGTCCAGACGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPVWPLL*SVQTLN
Trigger: GTTCAGCGTCTGGACCGACCACAAGAGGGGCCACAC...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTGTGTGGCCCCTCTTGTaGTCGGTCCAGACGCTGAAC +
Preference number: 4 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPVWPLL*SVQTLN
Trigger: GTTCAGCGTCTGGACCGACCACAAGAGGGGCCACAC...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGGCTGCTCCCTCCCGTaGCTCTGTGCACGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPGCSLP*LCARCP
Trigger: TGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCC...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp CCGGGCCCTTGGCAGCGTCACGGGTGGGCTCGGGGCACGTGGGCCTTACCTGAGAATCTGAGCTGGCCGTaGCTGCTCCCTCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGPWQRHGWARGTWALPENLSWP*LLPPVA
Trigger: AGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATT...CTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp CCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCGAGGGGCTGTGGCCATaGCCGTCGCCTCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGQPYKHGSRGTAHATASEGLWP*PSPPVC
Trigger: ACACACCGGAGGCGACGGCCATGGCCACAGCCCCTC...GGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp GGAGGCTCTGCGGAGGCAGGGCGGTGCAGTGCCCGGGGGAGGGGTCCGGACTGGGACCTGGCCTCAAAGTaGACAACCTCGAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: GGSAEAGRCSARGRGPDWDLASK*TTSRLD
Trigger: GTCCAGCCTCGAGGTTGTCCACTTTGAGGCCAGGTC...CCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGCCTCCGCAGAGCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp CCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCGAAGCCCAGCTCACGTaGCTCAGGACCCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PGQPYKHGSRGTAHATASEAQLT*LRTPGP
Trigger: AGGCCCCGGGGTCCTGAGCCACGTGAGCTGGGCTTC...GGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp GATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGTCAGTGGCGCTGAGCTaGCGTATCCCTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: DAEAGPAVAGRAQGGSGLSVALS*RIPPGL
Trigger: TAAGCCTGGAGGGATACGTCAGCTCAGCGCCACTGA...CAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp AGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCAGTGGCGCTGAGCTaGCGTATCCCTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: RRGRASASALPGTHGAASSVALS*RIPPGL
Trigger: TAAGCCTGGAGGGATACGTCAGCTCAGCGCCACTGA...GGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCCTTTGTCAGTGGCGCTaGGCTGACGTATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRLCQWR*ADVSLQ
Trigger: CTGGAGGGATACGTCAGCTCAGCGCCACTGACAAAG...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCCAGTGGTCGGGTCCCTaGCGTACCAGAGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGQWSGP*RTRGPR
Trigger: ACGAGGGCCTCTGGTACGTCAGGGACCCGACCACTG...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397017.6
CDS-3UTR TCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGACCCCGGGCTCGACTCTaGGCTGCTCAGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGPRARL*AAQALG
Trigger: GCCCAGTGCCTGAGCAGCTCAGAGTCGAGCCCGGGG...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375604.6
ENST00000535094.7
CDS-3UTR TCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGGTGGAGACACCACCTaGTGTCACCCACGGACACGT +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAGGDTT*CHPRTR
Trigger: ACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACC...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGTGGAGACACCACCTaGTGTCACCCACGGACACGT +
Preference number: 4 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSAGGDTT*CHPRTR
Trigger: ACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACC...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCCTCCACGGCCACGCCTaGTTTCTCCTCGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPALHGHA*FLLEAG
Trigger: GCCAGCTTCGAGGAGAAATCAGGCGTGGCCGTGGAG...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSGRLCD*SSARCW
Trigger: CCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCCTCTTGAGGGACTGGTaGTGGTCGGGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPLLRDW*WSGPAG
Trigger: CCCTGCCGGCCCCGACCAGCACCAGTCCCTCAAGAG...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACCCGCCGTCCTCCTCTaGGTCGGACGAGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTPAVLL*VGRVNL
Trigger: CAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGG...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCCCCGCCGTCCTCCTCTaGGTCGGACGAGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCPAVLL*VGRVNL
Trigger: CAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGG...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCACCCTCGTCGCCCTCCTaGACCAGCTCCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSPSSPS*TSSTTS
Trigger: GGACGTGGTGGAGCTGGTGCAGGAGGGCGACGAGGG...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCCCTCGTCGCCCTCCTaGACCAGCTCCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRPSSPS*TSSTTS
Trigger: GGACGTGGTGGAGCTGGTGCAGGAGGGCGACGAGGG...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGACACCTTCCTGGGTTTaGTGGGCAGACCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: DAEAGPAVAGRAQGGSGLTPSWV*WADLAS
Trigger: AGAGGCCAGGTCTGCCCAGCAAACCCAGGAAGGTGT...CAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGCCGATGCCAGCGTCCTaGAGGCTGGGGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQPMPAS*RLGMLV
Trigger: CACCAGCATCCCCAGCCTGCAGGACGCTGGCATCGG...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGCCGATGCCAGCGTCCTaGAGGCTGGGGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTPMPAS*RLGMLV
Trigger: CACCAGCATCCCCAGCCTGCAGGACGCTGGCATCGG...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCAACTTTCGATGGCCGTaGGCTGGCACAGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGNFRWP*AGTATG
Trigger: CCCGGTGGCTGTGCCAGCGCACGGCCATCGAAAGTT...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAACCTCCCGGAAGCCCTaGTCAAAGTGCCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RASQPDAEAGPAVAGRAQTSRKP*SKCRSC
Trigger: GCAGCTCCGGCACTTTGAGCAGGGCTTCCGGGAGGT...TTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCTCAGGCTGGCCTGCCTaGGGTGGAACACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGSGWPA*GGTPPP
Trigger: TGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGA...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCTGCACGGGCCGCGTCTaGCTGGCCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSCTGRV*LAASFF
Trigger: GAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCA...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGGCGACTTTGCCAGTaGCTCGGGTCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSGRLCQ*LGSGGH
Trigger: GTGGCCCCCAGACCCGAGGCACTGGCAAAGTCGCCC...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGGGGCAGGGCGACTTTaGCAGTGCCTCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSGAGRL*QCLGSG
Trigger: CCCAGACCCGAGGCACTGGCAAAGTCGCCCTGCCCC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCACGCTGAACGAGCCCTaGATCAGCAGCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QRASQPDAEAGPAVAGRATLNEP*ISSLPR
Trigger: CCTGGGCAAGCTGCTGATGCAGGGCTCGTTCAGCGT...GGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGACGCTGAACGAGCCCTaGATCAGCAGCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGTLNEP*ISSLPR
Trigger: CCTGGGCAAGCTGCTGATGCAGGGCTCGTTCAGCGT...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGAGGAACAGGTGCCGCTaGATGGGCTTGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQRNRCR*MGLNLA
Trigger: GGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCT...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCAGCACTGCCTTCTCGTaGAGGAACAGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: WPPSLQLDELLSTADPGLSTAFS*RNRCRC
Trigger: GCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCT...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGGGGCCTTACCTGAGCTaGTCAGGCACTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRGPYLS*SGTGPS
Trigger: GCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCC...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCCACCGCTTGCTGTTCTaGGAGACGGCGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: PGQPYKHGSRGTAHATASHRLLF*ETAVGR
Trigger: CCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTG...GGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp CCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCTCTGCGGACCAGGGATaGCCTCCCAGGCCAGCCCTA +
Preference number: 4 (lower is better)
Translates to: PGQPYKHGSRGTAHATASSADQG*PPRPAL
Trigger: TAGGGCTGGCCTGGGAGGGCATCCCTGGTCCGCAGA...GGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGTCCAGCGCCCGGTGCTaGCTGGCTTCTCTACAAGCC +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARSSARC*LASLQA
Trigger: GGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGA...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTTGAGGGACTGGTGCTaGTCGGGGCCGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSLRDWC*SGPAGA
Trigger: TGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTCAA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGTTCCTCTTGAGGGACTaGTGCTGGTCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPFLLRD*CWSGPA
Trigger: TGCCGGCCCCGACCAGCACCAGTCCCTCAAGAGGAA...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGGAACCAGCTTCTTaGGGCCCAACCCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTLEPAS*GPTRRP
Trigger: AGGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAG...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTAT +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPGPPFS*SATTVY
Trigger: ATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCC...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTAT +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAGPPFS*SATTVY
Trigger: ATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCC...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGCGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SLQLDELLSTADPGLDSARPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...CGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCACACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEAHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: PCPALLRPLARGSSTSPEGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGAGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGGACGCCACACCTTCCTaGGTTTGCTGGGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: GGSGLHARPRLLLGLALLDATPS*VCWADL
Trigger: CAGGTCTGCCCAGCAAACCCAGGAAGGTGTGGCGTC...CAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTCGGGCACACAAAGGATaGCGCAGCACCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: EGPRRLRVARSAEAPSGARAHKG*RSTSTI
Trigger: GATGGTGCTGGTGCTGCGCCATCCTTTGTGTGCCCG...AGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTCGATGGCCGTGCGCTaGCACAGCCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSSMAVR*HSHREW
Trigger: CCACTCCCGGTGGCTGTGCCAGCGCACGGCCATCGA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGGGAGCCTCTGCACGGTaGCCTGGTTGTCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGGASAR*PGCQAG
Trigger: ACCAGCTTGACAACCAGGCCACCGTGCAGAGGCTCC...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTGGCACTTTGGGCGGATaGAGTCTACCGCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPGTLGG*SLPRSA
Trigger: AGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCC...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGGCACTTTGGGCGGATaGAGTCTACCGCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSGTLGG*SLPRSA
Trigger: AGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCC...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGAGCTCCTGGCACTTTaGGCGGATGGAGTCTACCGC +
Preference number: 4 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSAELLAL*ADGVYR
Trigger: GCGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTC...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAAGGTGCCGGAGCTCCTaGCACTTTGGGCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RASQPDAEAGPAVAGRAQRCRSS*HFGRME
Trigger: CTCCATCCGCCCAAAGTGCCAGGAGCTCCGGCACCT...TTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCGCCTCCGCGCCGTCCTaGGACTGGCACTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGASAPS*DWHLST
Trigger: TGTGGACAAGTGCCAGTCCCAGGACGGCGCGGAGGC...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTAACTTCTCGATTTCCTaGAGGGCAGCCTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: EGPRRLRVARSAEAPSGANFSIS*RAASAP
Trigger: CGGCGCGGAGGCTGCCCTCCAGGAAATCGAGAAGTT...AGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCCTGGCCTGCCTGCGGTaGAACACCTCCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: ASQPDAEAGPAVAGRAQGLACLR*NTSSML
Trigger: AAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAG...GCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GCAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAGCTTCTTCAGGCTaGCCTGCCTGCGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: AEGIATRCGGGSGCRREGPASSG*PACGGT
Trigger: TGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGG...GCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCAGCTTCTTCAGGCTaGCCTGCCTGCGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLPASSG*PACGGT
Trigger: TGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGG...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCCGGGCCGCGTCTGCCTaGCCGCCAGCTTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSRAASA*PPASSG
Trigger: GCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCG...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGCGTGCCTGCGCAGGATaGCCAGGCTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGRACAG*PGFPPP
Trigger: AGGAGGAGGAAAGCCTGGCCATCCTGCGCAGGCACG...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTTCAGGATGCCCAGGATaGAGCTCAGCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: EGPRRLRVARSAEAPSGASGCPG*SSAPPA
Trigger: TGCAGGAGGCGCTGAGCTCCATCCTGGGCATCCTGA...AGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACATCAGGATGCCCAGGATaGAGCTCAGCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTSGCPG*SSAPPA
Trigger: TGCAGGAGGCGCTGAGCTCCATCCTGGGCATCCTGA...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCCCAGCTCCTTCACCTTaGTGTGGCCCCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLPAPSP*CGPSCG
Trigger: ACCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGG...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGTGGGCTCGGGGCACGTaGGCCTTACCTGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRWARGT*ALPELL
Trigger: GAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCA...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCATCAGTGGCGCTGAGCTaGCGTATCCCTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSASVALS*RIPPGL
Trigger: TAAGCCTGGAGGGATACGTCAGCTCAGCGCCACTGA...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCAGTGGTCGGGTCCCTaGCGTACCAGAGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSQWSGP*RTRGPR
Trigger: ACGAGGGCCTCTGGTACGTCAGGGACCCGACCACTG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCCAGTGGTCGGGTCCCTaGCGTACCAGAGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSQWSGP*RTRGPR
Trigger: ACGAGGGCCTCTGGTACGTCAGGGACCCGACCACTG...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTGGAGGTCTGGCCAGTaGCGGCTACAAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSWRSGQ*RLQAAG
Trigger: CCCAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTTGTCCGGAATCTCGCTaGAGGCCGGGTAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: PRRLRVARSAEAPSGAGLCPESR*RPGSQG
Trigger: TCCCTGACTACCCGGCCTTCAGCGAGATTCCGGACA...AAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTC +
Preference number: 4 (lower is better)
Translates to: PRRLRVARSAEAPSGAGLVRTQH*ACRLDV
Trigger: GACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCAC...AAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTC +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARVRTQH*ACRLDV
Trigger: GACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCAC...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGAGTGCTTGTTCCCAATaGGCTGCTCGCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGSACSQ*AARRPE
Trigger: CTCTGGACGGCGAGCAGCTCATTGGGAACAAGCACT...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCGCAGCTGGTACTTGGTaGTCCTCTGCACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRAAGTW*SSALAS
Trigger: TGAAGCCAGTGCAGAGGATCACCAAGTACCAGCTGC...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCCAGTGGTCGGGTCCCTaGCGTACCTGCAAGGGGCGA +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPQWSGP*RTCKGR
Trigger: TCGCCCCTTGCAGGTACGTCAGGGACCCGACCACTG...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp GGAGGCTCTGCGGAGGCAGGGCGGTGCAGTGCCCGGGGGAGGGGTCCGGACTGGCAACAAACTGGCATCTaGGGAAGACTGACGGCGACA +
Preference number: 4 (lower is better)
Translates to: GGSAEAGRCSARGRGPDWQQTGI*GRLTAT
Trigger: TGTCGCCGTCAGTCTTCCTCAGATGCCAGTTTGTTG...CCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGCCTCCGCAGAGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp CGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCCTTGCAGAAGAGCACTaGCTTCTCGTGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: RLSQGGPKAAPGCTLGRGLAEEH*LLVQEQ
Trigger: CTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAG...GCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCTGCTCCAGCGCCCGGTaGTGGCTGGCTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGCSSAR*WLASLQ
Trigger: TTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCA...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCCCCGCCGTCCTCCTCTaGGTCGGACGAGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: ALAAAGRVAQHGRPRARLPAVLL*VGRVNL
Trigger: CAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGG...GAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCCCCGCCGTCCTCCTCTaGGTCGGACGAGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAPAVLL*VGRVNL
Trigger: CAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGG...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRCSWTS*SARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCA...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGAGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RGCSLPWLCARCPVLESRVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGGCCTCCGAGGAGGCTaGAGTGCAGTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPGLRGG*SAVRQG
Trigger: CCCCTGCCTCACTGCACTGCAGCCTCCTCGGAGGCC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCGGAGTGGAGTGGAGGTaGGGCCTCCGAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVGVEWR*GLRGGC
Trigger: GCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCC...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCCGATGCCAGCGTCCTaGAGGCTGGGGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRPMPAS*RLGMLV
Trigger: CACCAGCATCCCCAGCCTGCAGGACGCTGGCATCGG...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGGAAAGATGCTGCGATaGGCAGGACGGACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: HRNPMRRRVRLSQGGPKAGKMLR*AGRTPS
Trigger: TGAAGGCGTCCGTCCTGCGCATCGCAGCATCTTTCC...CGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCAGCACGAGGACGAGCTaGAGGTTTGCCGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: AQGGSGLHARPRLLLGLASTRTS*RFAGKD
Trigger: ATCTTTCCCGGCAAACCTGCAGCTCGTCCTCGTGCT...GGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGAGCACGAGGACGAGCTaGAGGTTTGCCGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSSTRTS*RFAGKD
Trigger: ATCTTTCCCGGCAAACCTGCAGCTCGTCCTCGTGCT...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp TCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGTGGGCCAGGAGCCTCTaGACGGTGGCCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SLQLDELLSTADPGLDSAWARSL*TVAWLS
Trigger: TGACAACCAGGCCACCGTGCAGAGGCTCCTGGCCCA...CGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGAGCAGGTGCTCCACATaGGCCAGGCTGTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGSRCST*ARLLPM
Trigger: CATCGGCAACAGCCTGGCGCATGTGGAGCACCTGCT...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTTTGTTCCCAATGAGCTaGTCGCCGTCCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: RCGGGSGCRREGPRRLRVLFPMS*SPSRDR
Trigger: CCTGTCTCTGGACGGCGAGCAGCTCATTGGGAACAA...AACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGCAGCCCCCTCCTCCTTaGGATCTCCGCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGQPPPP*DLRREL
Trigger: CAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTG...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTGCACGGGCCGCGTCTaGCTGGCCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSCTGRV*LAASFF
Trigger: GAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCA...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGGGCGACTTTGCCAGTaGCTCGGGTCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPGRLCQ*LGSGGH
Trigger: GTGGCCCCCAGACCCGAGGCACTGGCAAAGTCGCCC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCGAGCTCAGCGCCTCCTaGAGGTCCTCAGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHAELSAS*RSSAPS
Trigger: CGAGGGGGCTGAGGACCTGCAGGAGGCGCTGAGCTC...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCGTGATAGCGATGAGGTaGATGGAGTCGTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPVIAMR*MESFTA
Trigger: GGCCGTGAACGACTCCATGCACCTCATCGCTATCAC...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCCTGCATCAGCAGCTTaGCCAGGTCGCCGAGATTCC +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTPASAA*PGRRDS
Trigger: GGAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGG...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACGCTGAACGAGCCCTaGATCAGCAGCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPTLNEP*ISSLPR
Trigger: CCTGGGCAAGCTGCTGATGCAGGGCTCGTTCAGCGT...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGAGGGCAGCCAGCCGGCTaGTCCTCCCAGGGCCTCCGA +
Preference number: 4 (lower is better)
Translates to: RGCSLPWLCARCPVLESRGQPAG*SSQGLR
Trigger: TCGGAGGCCCTGGGAGGAGCAGCCGGCTGGCTGCCC...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR GCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAAAGGGCGCGCAGCTGTaGGACGAGACGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPKGAQL*DETEAP
Trigger: CGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTT...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGTCAGGGTCAGGAACGGGGATCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGAGGTGCCGTGGGGGTaGAAGGAGATGCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SQGQERGSAAARGREVPWEVPWG*KEMPHP
Trigger: AGGATGAGGCATCTCCTTGCACCCCCACGGCACCTC...CCACGGCACCTCTCTGCCCCTCGCCGCGGCGGATCCCCGTTCCTGACCCTGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGCGCCCGGTGCTGGCTaGCTTCTCTACAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSAPGAG*LLYKPA
Trigger: TGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGTCCAGCGCCCGGTGCTaGCTGGCTTCTCTACAAGCC +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLSSARC*LASLQA
Trigger: GGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGA...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGTCCAGCGCCCGGTGCTaGCTGGCTTCTCTACAAGCC +
Preference number: 4 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQSSARC*LASLQA
Trigger: GGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGA...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCACGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSRPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp ACAGAAGAAAGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TEESKAVARCLSRTLGPASEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...GGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTCACCAGGTGGCAGGTaGACCTGGGTGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPSPGGR*TWVGGR
Trigger: CCTGCCTCCCACCCAGGTCCACCTGCCACCTGGTGA...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCCTTCTGTACTCAAGGTaGTCACCAGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLLLYSR*SPGGRW
Trigger: CCACCTGCCACCTGGTGACCACCTTGAGTACAGAAG...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGCCTGGTTGTCAAGCTaGTCCTGGTTCACACTGGGC +
Preference number: 4 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSAAWLSS*SWFTLG
Trigger: GCCCAGTGTGAACCAGGACCAGCTTGACAACCAGGC...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCGCCTGGTTGTCAAGCTaGTCCTGGTTCACACTGGGC +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCAWLSS*SWFTLG
Trigger: GCCCAGTGTGAACCAGGACCAGCTTGACAACCAGGC...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCGGAGCCTCTGCACGGTaGCCTGGTTGTCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KAAPGCTLGRGSFWGWPCGASAR*PGCQAG
Trigger: ACCAGCTTGACAACCAGGCCACCGTGCAGAGGCTCC...GCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGAGGAGCCTCTGCACGGTaGCCTGGTTGTCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EGGLAALAAAGRVAQHGRGASAR*PGCQAG
Trigger: ACCAGCTTGACAACCAGGCCACCGTGCAGAGGCTCC...TCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp GCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCACTTTGGGCGGATaGAGTCTACCGCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: ASQPDAEAGPAVAGRAQGGTLGG*SLPRSA
Trigger: AGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCC...GCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGAGCGCCGTCCTGGGACTaGCACTTGTCCACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: EGGLAALAAAGRVAQHGRAPSWD*HLSTGC
Trigger: ACAACCTGTGGACAAGTGCCAGTCCCAGGACGGCGC...TCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGAACTTCTCGATTTCCTaGAGGGCAGCCTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPNFSIS*RAASAP
Trigger: CGGCGCGGAGGCTGCCCTCCAGGAAATCGAGAAGTT...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGCAGGATCGCGTTGAGCTCCTaGATCTTATTTTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: QPQTARGSPAPRPRYPCRIALSS*ILFSAP
Trigger: CGGTGCGGAAAATAAGATCCAGGAGCTCAACGCGAT...CCTGCAGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCAGCTTCTTCAGGCTaGCCTGCCTGCGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARPASSG*PACGGT
Trigger: TGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGG...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCACCGCCCTCGGAGCTaGAGTTCTCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSHRPRS*SSQSLA
Trigger: GGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCGTGCCTGCGCAGGATaGCCAGGCTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLRACAG*PGFPPP
Trigger: AGGAGGAGGAAAGCCTGGCCATCCTGCGCAGGCACG...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGCCAGCTCCTTCACCTTaGTGTGGCCCCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: HRNPMRRRVRLSQGGPKAPAPSP*CGPSCG
Trigger: ACCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGG...CGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCCCAGCTCCTTCACCTTaGTGTGGCCCCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCPAPSP*CGPSCG
Trigger: ACCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGG...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCGGAGGGGCTCTTCTGTaGGGTCCTAGGGCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KAAPGCTLGRGSFWGWPCGGALL*GPRALC
Trigger: GCAAAGAGCCCTAGGACCCCACAGAAGAGCCCCTCC...GCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp CAGGGTCAGGAACGGGGATCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGCTGAGGTGCCCGTGCTaGTCCACGTTAAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: QGQERGSAAARGREVPWGLRCPC*STLRIH
Trigger: GTGAATCCTTAACGTGGACCAGCACGGGCACCTCAG...CCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGGATCCCCGTTCCTGACCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp TCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATGGCAGAGAGGTGCCGTaGGGGTGCAAGGAGATGCCT +
Preference number: 4 (lower is better)
Translates to: SAAARGREVPWGCKEMPHGREVP*GCKEMP
Trigger: AGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCC...ATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp GGAGGCTCTGCGGAGGCAGGGCGGTGCAGTGCCCGGGGGAGGGGTCCGGACTGGAGCCTGGCTGGATTCTaGATCTGTTCTGGAGGCACA +
Preference number: 4 (lower is better)
Translates to: GGSAEAGRCSARGRGPDWSLAGF*ICSGGT
Trigger: TGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCT...CCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGCCTCCGCAGAGCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp TGCCTGCGCCCAGGCTTTGCGGCACAGACCGGCCTCTGCGGACCAGGGATGCCCAGGGCGTCACCTATGTaGCCAACCTCGCTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLRPGFAAQTGLCGPGMPRASPM*PTSLQQ
Trigger: CTGCTGCAGCGAGGTTGGCCACATAGGTGACGCCCT...GGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGTCAGTGGCGCTGAGCTaGCGTATCCCTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGSVALS*RIPPGL
Trigger: TAAGCCTGGAGGGATACGTCAGCTCAGCGCCACTGA...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTCTTTGTCAGTGGCGCTaGGCTGACGTATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PRRLRVARSAEAPSGAGLLCQWR*ADVSLQ
Trigger: CTGGAGGGATACGTCAGCTCAGCGCCACTGACAAAG...AAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGCTCAGGTGCCTCCAGTaGGTGGGACGTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGLRCLQ*VGRFAP
Trigger: TGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAG...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCCAGTGGTCGGGTCCCTaGCGTACCAGAGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRQWSGP*RTRGPR
Trigger: ACGAGGGCCTCTGGTACGTCAGGGACCCGACCACTG...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000535094.7
CDS-3UTR TCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGAGGGGCAGGGCTCTCTaGGCTATGGTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRRGRAL*AMVGST
Trigger: AGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCT...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGGCTGGGAGGGTAGCGTaGGGGGAATGCAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRAGRVA*GECSHA
Trigger: GGCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGC...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGCTGGGAGGGTAGCGTaGGGGGAATGCAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SCATRRRHRACTVHQGHRAGRVA*GECSHA
Trigger: GGCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGC...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGATGGAGGTCTGGCCAGTaGCGGCTACAAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGWRSGQ*RLQAAG
Trigger: CCCAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCA...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGGGCACGTGGGCCTTACCTGAGCTGCTCAGGCACTGGGCCGAGCCGGACGGGCGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: GARGPYLSCSGTGPSRTGGLSPG*IRCQRP
Trigger: AGGACGCTGGCATCGGATTCATCCTGGTGATAGACC...GCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTPSASP*GRNFRW
Trigger: CCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGG...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp ACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCGGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTC +
Preference number: 4 (lower is better)
Translates to: TSCSARPTPGSTLRGDQAVRTQH*ACRLDV
Trigger: GACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCAC...CGCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACCTTGTCCACAGGTTGTaGGGCCAGCAGGTAAATCCC +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDLVHRL*GQQVNP
Trigger: GGGATTTACCTGCTGGCCTCACAACCTGTGGACAAG...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp ACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACGTTGTGAAGGCCTGTTaGCAGGAGGTGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: TLRGDQAGTGFGVGSAGHVVKAC*QEVSHQ
Trigger: CTGATGGCTCACCTCCTGTCAACAGGCCTTCACAAC...GTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCGCAGCTGGTACTTGGTaGTCCTCTGCACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: QRASQPDAEAGPAVAGRAAAGTW*SSALAS
Trigger: TGAAGCCAGTGCAGAGGATCACCAAGTACCAGCTGC...GGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGGCAGCTGGTACTTGGTaGTCCTCTGCACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQAAGTW*SSALAS
Trigger: TGAAGCCAGTGCAGAGGATCACCAAGTACCAGCTGC...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTGCAGCTGGTACTTGGTaGTCCTCTGCACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLAAGTW*SSALAS
Trigger: TGAAGCCAGTGCAGAGGATCACCAAGTACCAGCTGC...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGTCGGTCCAGACGCTaGACGAGCCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSGRSRR*TSPASA
Trigger: TGCTGATGCAGGGCTCGTTCAGCGTCTGGACCGACC...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCGGAAACCCCGACTGCTaGGACGTTCTGTGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCGNPDC*DVLCLD
Trigger: GTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTCC...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCTCCAACAGTCAAACATaGGGCTGCCGCCCGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSSNSQT*GCRPWC
Trigger: GCACCACGGGCGGCAGCCTCATGTTTGACTGTTGGA...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR TCA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTGCCTCCGGTGTGTCTTaGACAAGCCTGATGACGTCA +
Preference number: 4 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLASGVS*TSLMTS
Trigger: TGACGTCATCAGGCTTGTTCAAGACACACCGGAGGC...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR GCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEAGRLCD*SSARCW
Trigger: CCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCC...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCAGCCGGACGGACAGGCTaGTGGCCGGCACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEAAGRTG*WPAPSP
Trigger: AGGGCTGGGTGCCGGCCAGCAGCCTGTCCGTCCGGC...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGGGCTCGACTCTGAGCTaGTCAGGCACTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQGSTLS*SGTGPS
Trigger: GCTCGGCCCAGTGCCTGAGCAGCTCAGAGTCGAGCC...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTGGCTCGACTCTGAGCTaGTCAGGCACTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSGSTLS*SGTGPS
Trigger: GCTCGGCCCAGTGCCTGAGCAGCTCAGAGTCGAGCC...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRCSWTS*SARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCA...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGAGCAATGGGCGCACCGTCATGCTaGCCAGTGCGAGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: RPRLLLGLALLMQGCRAMGAPSC*PVRVRS
Trigger: GCTCCTGACTCGCACTGGGCAGCATGACGGTGCGCC...CATTGCTCTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCAACCGGGCTTCCGTCCTaGCCCCGCCCACCGGACAGG +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEATGLPS*PRPPDR
Trigger: CCTGTCCGGTGGGCGGGGGCAGGACGGAAGCCCGGT...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACCGATGCCAGCGTCCTaGAGGCTGGGGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPPMPAS*RLGMLV
Trigger: CACCAGCATCCCCAGCCTGCAGGACGCTGGCATCGG...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCGACGAGCTGCAGGTTTaGCGGGAAAGATGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: AEGIATRCGGGSGCRREGDELQV*RERCCD
Trigger: ATCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTC...GCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGAAGCCCTGCTCAAAGTaGCGGAGCTGCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPKPCSK*RSCRHC
Trigger: GCAGTGTCTGCAGCTCCGGCACTTTGAGCAGGGCTT...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCACCTCCCGGAAGCCCTaGTCAAAGTGCCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSTSRKP*SKCRSC
Trigger: GCAGCTCCGGCACTTTGAGCAGGGCTTCCGGGAGGT...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCAGCAGGTGCTCCACATaGGCCAGGCTGTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGSRCST*ARLLPM
Trigger: CATCGGCAACAGCCTGGCGCATGTGGAGCACCTGCT...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACATTGTTCCCAATGAGCTaGTCGCCGTCCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTLFPMS*SPSRDR
Trigger: CCTGTCTCTGGACGGCGAGCAGCTCATTGGGAACAA...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCAACTGGTCACAGAGGTaGCGGAGCTCCTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCNWSQR*RSSWHF
Trigger: AAAGTGCCAGGAGCTCCGGCACCTCTGTGACCAGTT...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACACAGCCCCCTCCTCCTTaGGATCTCCGCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: GHTRARSCATRRRHRACTQPPPP*DLRREL
Trigger: CAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTG...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGGTCTCCAGGCGGCGGTaGAGCTCCAGGGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQVSRRR*SSRDLL
Trigger: CAGCAAGTCCCTGGAGCTGCACCGCCGCCTGGAGAC...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCTCCTCCATGCTTGCCTaGTTCTGGAAGACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRSSMLA*FWKTFR
Trigger: GCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGA...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGTCCTCCATGCTTGCCTaGTTCTGGAAGACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSSSMLA*FWKTFR
Trigger: GCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGA...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTGGAACACCTCCTCCATaGTTGCCTGCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPGTPPP*LPASGR
Trigger: TCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCC...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTCAGGCTGGCCTGCCTaGGGTGGAACACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPSGWPA*GGTPPP
Trigger: TGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGA...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACGTGATAGCGATGAGGTaGATGGAGTCGTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDVIAMR*MESFTA
Trigger: GGCCGTGAACGACTCCATGCACCTCATCGCTATCAC...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGCTGAACGAGCCCTaGATCAGCAGCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSTLNEP*ISSLPR
Trigger: CCTGGGCAAGCTGCTGATGCAGGGCTCGTTCAGCGT...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCAGGAACAGGTGCCGCTaGATGGGCTTGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGRNRCR*MGLNLA
Trigger: GGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCT...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGAGCACTGCCTTCTCGTaGAGGAACAGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLSTAFS*RNRCRC
Trigger: GCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCT...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGACCGCACGCTGGGCCCTaGCCACTGCCGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGPHAGP*PLPASF
Trigger: AAAAGAAGCCGGCAGTGGGCAGGGCCCAGCGTGCGG...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCGGGACGATGTCCTGGTaGATGATTTCATCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRGTMSW*MISSVA
Trigger: GGCCACAGATGAAATCATGCACCAGGACATCGTCCC...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGCTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQLQACS*LVSTFR
Trigger: TCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAG...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTCTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: PKAAPGCTLGRGSFWGWPLQACS*LVSTFR
Trigger: TCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAG...AGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTTCCTCTTGAGGGACTaGTGCTGGTCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSFLLRD*CWSGPA
Trigger: TGCCGGCCCCGACCAGCACCAGTCCCTCAAGAGGAA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGTGCCTCCAGTGAGTaGGACGTTTTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: WPPSLQLDELLSTADPGLGASSE*DVLLQP
Trigger: AGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACC...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCTGGAACCAGCTTCTTaGGGCCCAACCCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSLEPAS*GPTRRP
Trigger: AGGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCATCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPSEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATCACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCAGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCAGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLPWLCARCPVLESRLPAAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGCAGGAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: QPQTARGSPAPRPRYPCRNCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...CCTGCAGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCTCACCAGGTGGCAGGTaGACCTGGGTGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRSPGGR*TWVGGR
Trigger: CCTGCCTCCCACCCAGGTCCACCTGCCACCTGGTGA...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCACGGCTACAAGCCGCTaGGAGGGTAGCGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSTATSR*EGSVRG
Trigger: TCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGT...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGTCGACTGGACGTCATTaGGCAGCTCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: DAEAGPAVAGRAQGGSGLSTGRH*AALFQP
Trigger: TGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGA...CAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp AGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCACTGAGCTTGTCGACTaGACGTCATTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RRVRLSQGGPKAAPGCTLTELVD*TSLGSS
Trigger: AGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGT...GAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGGTCCTGGTTCACACTaGGCTCTGAGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: GHTRARSCATRRRHRACTGPGSH*ALSPQP
Trigger: AGGCTGAGGGCTCAGAGCCCAGTGTGAACCAGGACC...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGTTGTCAAGCTGGTCCTaGTTCACACTGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DAEAGPAVAGRAQGGSGLLSSWS*FTLGSE
Trigger: CTCAGAGCCCAGTGTGAACCAGGACCAGCTTGACAA...CAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGCCTGGTTGTCAAGCTaGTCCTGGTTCACACTGGGC +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPAWLSS*SWFTLG
Trigger: GCCCAGTGTGAACCAGGACCAGCTTGACAACCAGGC...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATTTCTCCTCGAAGCTaGCCAGGTCCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GGSGLHARPRLLLGLALLISPRS*PGPSAG
Trigger: ACCTGCTGAGGGACCTGGCCAGCTTCGAGGAGAAAT...CAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCATTTCTCCTCGAAGCTaGCCAGGTCCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSAISPRS*PGPSAG
Trigger: ACCTGCTGAGGGACCTGGCCAGCTTCGAGGAGAAAT...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACATTTCTCCTCGAAGCTaGCCAGGTCCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDISPRS*PGPSAG
Trigger: ACCTGCTGAGGGACCTGGCCAGCTTCGAGGAGAAAT...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAATCTCCGCAGAGAACTaGTCACAGAGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RASQPDAEAGPAVAGRAQISAEN*SQRCRS
Trigger: GCTCCGGCACCTCTGTGACCAGTTCTCTGCGGAGAT...TTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGATCTCCGCAGAGAACTaGTCACAGAGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARISAEN*SQRCRS
Trigger: GCTCCGGCACCTCTGTGACCAGTTCTCTGCGGAGAT...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCCTGGCCTGCCTGCGGTaGAACACCTCCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGLACLR*NTSSML
Trigger: AAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAG...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCCTGGCCTGCCTGCGGTaGAACACCTCCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSLACLR*NTSSML
Trigger: AAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAG...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCCTCGCCGAATGCCTaGGGAGGGGCAGGGCGACTT +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEAASPNA*GGAGRL
Trigger: AAGTCGCCCTGCCCCTCCCCAGGCATTCGGCGAGGC...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCGCACTCATCTCACTCTTaGCCCTCCGGTAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TSCSARPTPGSTLRGDQAHSSHS*PSGRAL
Trigger: GAGGGCCCTACCGGAGGGCCAAGAGTGAGATGAGTG...CGCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGCACTCATCTCACTCTTaGCCCTCCGGTAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTHSSHS*PSGRAL
Trigger: GAGGGCCCTACCGGAGGGCCAAGAGTGAGATGAGTG...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGGAGGTGAGCCATCAGTaGGTTATCCATCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSAREVSHQ*VIHLRG
Trigger: GCCGCGGAGATGGATAACCCACTGATGGCTCACCTC...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCTCAGGATGCCCAGGATaGAGCTCAGCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSSGCPG*SSAPPA
Trigger: TGCAGGAGGCGCTGAGCTCCATCCTGGGCATCCTGA...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGTCCTTCACCTTGGTGTaGCCCCTCTTGTGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPSFTLV*PLLWSV
Trigger: GACCGACCACAAGAGGGGCCACACCAAGGTGAAGGA...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCTCCTTCACCTTGGTGTaGCCCCTCTTGTGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGSFTLV*PLLWSV
Trigger: GACCGACCACAAGAGGGGCCACACCAAGGTGAAGGA...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGTCCTTCACCTTGGTGTaGCCCCTCTTGTGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARSFTLV*PLLWSV
Trigger: GACCGACCACAAGAGGGGCCACACCAAGGTGAAGGA...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCCCAGCTCCTTCACCTTaGTGTGGCCCCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAPAPSP*CGPSCG
Trigger: ACCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGG...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGAATCTGAGCTGGCCGTaGCTGCTCCCTCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRNLSWP*LLPPVA
Trigger: AGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATT...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGACACCAATCTGAGCTaGCCGTGGCTGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSDTNLS*PWLLPP
Trigger: GGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTGTC...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGTTTCATCTGTGGCCATaGCCGTCGCCTCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARFHLWP*PSPPVC
Trigger: ACACACCGGAGGCGACGGCCATGGCCACAGATGAAA...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR TCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCGGTGGAGACACCACCTaGTGTCACCCACGGACACGT +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPGGDTT*CHPRTR
Trigger: ACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACC...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGGTGGAGACACCACCTaGTGTCACCCACGGACACGT +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSGGDTT*CHPRTR
Trigger: ACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGCGATGTCCTGGTGCATaGTTTCATCTGCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: RVARSAEAPSGAGLADAGRCPGA*FHLRRP
Trigger: AGGCCGGCGCAGATGAAATCATGCACCAGGACATCG...CCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp AAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: KAAPGCTLGRGSFWGWPCGLSPG*IRCQRP
Trigger: AGGACGCTGGCATCGGATTCATCCTGGTGATAGACC...GCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp AGTCAGGGTCAGGAACGGGGATCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: SQGQERGSAAARGREVPWGLSPG*IRCQRP
Trigger: AGGACGCTGGCATCGGATTCATCCTGGTGATAGACC...CCACGGCACCTCTCTGCCCCTCGCCGCGGCGGATCCCCGTTCCTGACCCTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR TCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCAAGGACTGCAGCATCTaGGCCGTCTGCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGKDCSI*AVCFTM
Trigger: CATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTT...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp CCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTGTTGCCGATGTCTGTaGAGGTTGCTATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGRPRCSWTSCSARPTPGCCRCL*RLLSSG
Trigger: CCCAGAAGATAGCAACCTTCACAGACATCGGCAACA...GCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAAGTGCTTGTTCCCAATaGGCTGCTCGCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GHTRARSCATRRRHRACTSACSQ*AARRPE
Trigger: CTCTGGACGGCGAGCAGCTCATTGGGAACAAGCACT...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCCCTGTTGACAGGAGGTaGGCCATCAGTGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: KAAPGCTLGRGSFWGWPCPVDRR*AISGLS
Trigger: GGATAACCCACTGATGGCTCACCTCCTGTCAACAGG...GCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCCTGTTGACAGGAGGTaGGCCATCAGTGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGPVDRR*AISGLS
Trigger: GGATAACCCACTGATGGCTCACCTCCTGTCAACAGG...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp AGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGTTGTGAAGGCCTGTTaGCAGGAGGTGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RRLRVARSAEAPSGAGLAVVKAC*QEVSHQ
Trigger: CTGATGGCTCACCTCCTGTCAACAGGCCTTCACAAC...AGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGTTGTGAAGGCCTGTTaGCAGGAGGTGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGVVKAC*QEVSHQ
Trigger: CTGATGGCTCACCTCCTGTCAACAGGCCTTCACAAC...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACATCCTTCTTGTTGTaGAGGCCTGTTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: RLCGEIRRGRASASALPGTSFLL*RPVDRR
Trigger: CCTCCTGTCAACAGGCCTTCACAACAAGAAGGATGT...GCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCGGTCGGTCCAGACGCTaGACGAGCCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRGRSRR*TSPASA
Trigger: TGCTGATGCAGGGCTCGTTCAGCGTCTGGACCGACC...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGGTGACTTGTCACGTCTaGTCCGATGCTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGVTCHV*SDALPG
Trigger: GCCTGGAAGAGCATCGGATCAGACGTGACAAGTCAC...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACCGATGTCCTGGTGCATaGTTTCATCTGTGGCCATGG +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDRCPGA*FHLWPW
Trigger: CCATGGCCACAGATGAAATCATGCACCAGGACATCG...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR TCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCCGATGTCCTGGTGCATaGTTTCATCTCCGGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPRCPGA*FHLRPP
Trigger: GGGCGGCCGGAGATGAAATCATGCACCAGGACATCG...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCTCCTCCCTCTTCTTaGAGAAGAGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RRGRASASALPGTHGAASSPPSS*RRALPS
Trigger: AGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGA...GGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCGCTTCTCTACAAGCCTaGAGCTGGCTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAASLQA*SWLVST
Trigger: AGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGC...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACACCCGCCGTCCTCCTCTaGGTCGGACGAGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: HKGAQLCDETEAPRLHSTPAVLL*VGRVNL
Trigger: CAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGG...TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACCCTCGTCGCCCTCCTaGACCAGCTCCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: RGCSLPWLCARCPVLESRPSSPS*TSSTTS
Trigger: GGACGTGGTGGAGCTGGTGCAGGAGGGCGACGAGGG...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCACCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEAPGRPR*SWTSCS
Trigger: TGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATAGGCCGCGCTACCCCTaGAGGTCGGAGAAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNRPRYP*RSEKGA
Trigger: GGCCCCCTTCTCCGACCTGCAGGGGTAGCGCGGCCT...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACAGAAGAAAGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCCGATGCCAGCGTCCTaGAGGCTGGGGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TEESKAVARCLSRTLGPAPMPAS*RLGMLV
Trigger: CACCAGCATCCCCAGCCTGCAGGACGCTGGCATCGG...GGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGTGCCCCTCTTTCAGTaGCAGCCTCAAATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSAVPLFQ*QPQILL
Trigger: AAGGAGGATTTGAGGCTGGCACTGAAAGAGGGGCAC...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGAACCTCCCGGAAGCCCTaGTCAAAGTGCCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGTSRKP*SKCRSC
Trigger: GCAGCTCCGGCACTTTGAGCAGGGCTTCCGGGAGGT...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGAAGGTCCCTCAGCAGGTaGTCCACATGCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGRSLSR*STCARL
Trigger: CAGCCTGGCGCATGTGGAGCACCTGCTGAGGGACCT...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGTTGTTCCCAATGAGCTaGTCGCCGTCCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPLFPMS*SPSRDR
Trigger: CCTGTCTCTGGACGGCGAGCAGCTCATTGGGAACAA...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGAACTGGTCACAGAGGTaGCGGAGCTCCTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPNWSQR*RSSWHF
Trigger: AAAGTGCCAGGAGCTCCGGCACCTCTGTGACCAGTT...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTTCCTCCATGCTTGCCTaGTTCTGGAAGACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: RREGPRRLRVARSAEAPSSSMLA*FWKTFR
Trigger: GCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGA...AGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACATCCTCCATGCTTGCCTaGTTCTGGAAGACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTSSMLA*FWKTFR
Trigger: GCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGA...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCGGAACACCTCCTCCATaGTTGCCTGCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCGTPPP*LPASGR
Trigger: TCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCC...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTTCAGGCTGGCCTGCCTaGGGTGGAACACCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSSGWPA*GGTPPP
Trigger: TGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGA...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGGCTGAGCCGCGGCCCTaGCGGCTCTCACTCATCTCA +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRAEPRP*RLSLIS
Trigger: TGAGATGAGTGAGAGCCGGCAGGGCCGCGGCTCAGC...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCCCTGCATCAGCAGCTTaGCCAGGTCGCCGAGATTCC +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSPASAA*PGRRDS
Trigger: GGAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGG...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGGCAAGCACAGTGCACTaGGGCCCTGGAAACCCCGAC +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQASTVH*GPGNPD
Trigger: GTCGGGGTTTCCAGGGCCGCAGTGCACTGTGCTTGC...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGATCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTAGGTTCCCAAGCATCTaGTGGAAACGGGAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSAAARGREVPWGCKEMPRFPSI*WKRERR
Trigger: CCTCCTCTCCCGTTTCCAGCAGATGCTTGGGAACCT...AGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGGATCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR GCA 90 bp CGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCCGCCTCTAATTTGCGATaGGCAGGACGGACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RRGEGQRGAVGVQGDASSASNLR*AGRTPS
Trigger: TGAAGGCGTCCGTCCTGCGCATCGCAAATTAGAGGC...GGATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGCTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGLQACS*LVSTFR
Trigger: TCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAG...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCCTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPALQACS*LVSTFR
Trigger: TCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAG...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAATCCAGCGCCCGGTGCTaGCTGGCTTCTCTACAAGCC +
Preference number: 4 (lower is better)
Translates to: PCPALLRPLARGSSTSPESSARC*LASLQA
Trigger: GGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGA...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGTCCAGCGCCCGGTGCTaGCTGGCTTCTCTACAAGCC +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQSSARC*LASLQA
Trigger: GGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGA...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGTTCCTCTTGAGGGACTaGTGCTGGTCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQFLLRD*CWSGPA
Trigger: TGCCGGCCCCGACCAGCACCAGTCCCTCAAGAGGAA...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTAT +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPGPPFS*SATTVY
Trigger: ATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCAGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEAGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCTATGGTCGGCAGCACTaGTCCACGCCACACCCTGCA +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSYGRQH*STPHPA
Trigger: TGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATA...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCAAGGTGGTCACCAGGTaGCAGGTGGACCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRKVVTR*QVDLGG
Trigger: CCCACCCAGGTCCACCTGCCACCTGGTGACCACCTT...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCACGGCTACAAGCCGCTaGGAGGGTAGCGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSTATSR*EGSVRG
Trigger: TCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGT...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCCGCACCCTGGAGGTCTaGCCAGTGACGGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSRTLEV*PVTATS
Trigger: GCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCG...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCAGCGGGACGATGTCCTaGTGCATGATTTCATCTGCG +
Preference number: 4 (lower is better)
Translates to: ASQPDAEAGPAVAGRAQGSGTMS*CMISSA
Trigger: CGCAGATGAAATCATGCACCAGGACATCGTCCCGCT...GCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTTCTTTAGCTGGTCCTaGATGTCGGCAGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDFFSWS*MSAAQS
Trigger: GCTCTGTGCTGCCGACATCCAGGACCAGCTAAAGAA...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCGACTGGACGTCATTaGGCAGCTCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDSTGRH*AALFQP
Trigger: TGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGA...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCTTGTCAAGCTGGTCCTaGTTCACACTGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCLSSWS*FTLGSE
Trigger: CTCAGAGCCCAGTGTGAACCAGGACCAGCTTGACAA...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGGCACTTTGGGCGGATaGAGTCTACCGCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSGTLGG*SLPRSA
Trigger: AGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCAGGTGCCGGAGCTCCTaGCACTTTGGGCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVRCRSS*HFGRME
Trigger: CTCCATCCGCCCAAAGTGCCAGGAGCTCCGGCACCT...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCGATCTCCGCAGAGAACTaGTCACAGAGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: TSCSARPTPGSTLRGDQAISAEN*SQRCRS
Trigger: GCTCCGGCACCTCTGTGACCAGTTCTCTGCGGAGAT...CGCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCGCGCCGTCCTGGGACTaGCACTTGTCCACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPAPSWD*HLSTGC
Trigger: ACAACCTGTGGACAAGTGCCAGTCCCAGGACGGCGC...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGATGCTTGCCTGCTTCTaGAAGACCTTTCGCACGTGC +
Preference number: 4 (lower is better)
Translates to: REGPRRLRVARSAEAPSGMLACF*KTFRTC
Trigger: GCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCAT...CCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAATGCTTGCCTGCTTCTaGAAGACCTTTCGCACGTGC +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAMLACF*KTFRTC
Trigger: GCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCAT...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTATGCTTGCCTGCTTCTaGAAGACCTTTCGCACGTGC +
Preference number: 4 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLMLACF*KTFRTC
Trigger: GCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCAT...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp ACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACATGCTTGCCTGCTTCTaGAAGACCTTTCGCACGTGC +
Preference number: 4 (lower is better)
Translates to: TLRGDQAGTGFGVGSAGHMLACF*KTFRTC
Trigger: GCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCAT...GTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCACACTCATCTCACTCTTaGCCCTCCGGTAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: LRVARSAEAPSGAGLADAHSSHS*PSGRAL
Trigger: GAGGGCCCTACCGGAGGGCCAAGAGTGAGATGAGTG...TGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCCACTCATCTCACTCTTaGCCCTCCGGTAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPHSSHS*PSGRAL
Trigger: GAGGGCCCTACCGGAGGGCCAAGAGTGAGATGAGTG...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCACTCATCTCACTCTTaGCCCTCCGGTAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSHSSHS*PSGRAL
Trigger: GAGGGCCCTACCGGAGGGCCAAGAGTGAGATGAGTG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGACGTGCCTGCGCAGGATaGCCAGGCTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGRACAG*PGFPPP
Trigger: AGGAGGAGGAAAGCCTGGCCATCCTGCGCAGGCACG...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGAGGTGAGCCATCAGTaGGTTATCCATCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSEVSHQ*VIHLRG
Trigger: GCCGCGGAGATGGATAACCCACTGATGGCTCACCTC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTTTCTCTGGCATTCCTaGAAAAACGGGCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: PGRPRCSWTSCSARPTPGFLWHS*KNGQSE
Trigger: CTCCGACTGCCCGTTTTTCCAGGAATGCCAGAGAAA...GCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTTATGCTCCCTTTTCTaGTCTGGAGAGTGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLLCSLF*SGECRL
Trigger: CAGCCGACACTCTCCAGACCAGAAAAGGGAGCATAA...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGTGGCAGCGTCACGGGTaGGCTCGGGGCACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDEWQRHG*ARGTWA
Trigger: GGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCA...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp GATCAACGCCTTAGCCTGGCTTCAACCCATGCTGGGCGGGGAGGCCGGGTCTGTATGCCGAGACCTCTGTaGCCATGGCCGTCGCCTCCG +
Preference number: 4 (lower is better)
Translates to: DQRLSLASTHAGRGGRVCMPRPL*PWPSPP
Trigger: CGGAGGCGACGGCCATGGCCACAGAGGTCTCGGCAT...ACAGACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCCAGGCTAAGGCGTTGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTAGCGGGACGATGTCCTaGTGCATGATTTCATCTCCG +
Preference number: 4 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLSGTMS*CMISSP
Trigger: CGGAGATGAAATCATGCACCAGGACATCGTCCCGCT...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCCTTTGTCAGTGGCGCTaGGCTGACGTATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPLCQWR*ADVSLQ
Trigger: CTGGAGGGATACGTCAGCTCAGCGCCACTGACAAAG...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCTCAGGTGCCTCCAGTaGGTGGGACGTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSLRCLQ*VGRFAP
Trigger: TGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTTGTCCGGAATCTCGCTaGAGGCCGGGTAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSCPESR*RPGSQG
Trigger: TCCCTGACTACCCGGCCTTCAGCGAGATTCCGGACA...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSGLSPG*IRCQRP
Trigger: AGGACGCTGGCATCGGATTCATCCTGGTGATAGACC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp TCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGAAGGACTGCAGCATCTaGGCCGTCTGCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: SLQLDELLSTADPGLDSAKDCSI*AVCFTM
Trigger: CATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTT...CGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTC +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPVRTQH*ACRLDV
Trigger: GACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCAC...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTGTTGCCGATGTCTGTaGAGGTTGCTATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDCCRCL*RLLSSG
Trigger: CCCAGAAGATAGCAACCTTCACAGACATCGGCAACA...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCCTGTTGACAGGAGGTaGGCCATCAGTGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRPVDRR*AISGLS
Trigger: GGATAACCCACTGATGGCTCACCTCCTGTCAACAGG...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCACATCCTTCTTGTTGTaGAGGCCTGTTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCTSFLL*RPVDRR
Trigger: CCTCCTGTCAACAGGCCTTCACAACAAGAAGGATGT...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGACATCCTTCTTGTTGTaGAGGCCTGTTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQTSFLL*RPVDRR
Trigger: CCTCCTGTCAACAGGCCTTCACAACAAGAAGGATGT...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCCTGCCTTTGCGTTTCTaGCACGCACAACCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: ALAAAGRVAQHGRPRARLLPLRF*HAQPCC
Trigger: GCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAG...GAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp CCGGGCACACACGGGGCAGCTTCCTCGCCCGGGCCCTTGGCAGCGTCACGGGTGACTGCCCGCATCCCGTaGGTTAGAAACAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PGTHGAASSPGPLAASRVTARIP*VRNKLL
Trigger: TAAAAGCTTGTTTCTAACTCACGGGATGCGGGCAGT...CACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTGCCCCGTGTGTGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCTTGCAGAAGAGCACTaGCTTCTCGTGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARLAEEH*LLVQEQ
Trigger: CTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAG...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCTCTCCTCCCTCTTCTTaGAGAAGAGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCSPPSS*RRALPS
Trigger: AGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGA...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp TCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGCTTCTCTACAAGCCTaGAGCTGGCTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: SLQLDELLSTADPGLDSAASLQA*SWLVST
Trigger: AGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGC...CGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCGTGAGTGGGACGTTTTaGTCCAACCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: RRGRASASALPGTHGAASVSGTF*SNLCPF
Trigger: AAAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCAC...GGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACATCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTSDELI*SSALDQ
Trigger: CTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGA...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCTCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCSDELI*SSALDQ
Trigger: CTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGA...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATGGAGTGGAGTGGAGGTaGGGCCTCCGAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNGVEWR*GLRGGC
Trigger: GCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCC...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCGGAGGCACCGCGCCTaGACAGTACATCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSRRHRA*TVHQGH
Trigger: ATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCG...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGGGGACGATGTCCTGGTaGATGATTTCATCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQGTMSW*MISSAP
Trigger: CGGCGCAGATGAAATCATGCACCAGGACATCGTCCC...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGAAAGATGCTGCGATaGGCAGGACGGACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSGKMLR*AGRTPS
Trigger: TGAAGGCGTCCGTCCTGCGCATCGCAGCATCTTTCC...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCGGAAAGATGCTGCGATaGGCAGGACGGACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPGKMLR*AGRTPS
Trigger: TGAAGGCGTCCGTCCTGCGCATCGCAGCATCTTTCC...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGACGAGCTGCAGGTTTaGCGGGAAAGATGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSDELQV*RERCCD
Trigger: ATCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGGTGCCCCTCTTTCAGTaGCAGCCTCAAATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGVPLFQ*QPQILL
Trigger: AAGGAGGATTTGAGGCTGGCACTGAAAGAGGGGCAC...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp CATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGTATCTTCTGGGACGCTaGGTCCAAGATGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: HRNPMRRRVRLSQGGPKAYLLGR*VQDGFD
Trigger: GTCAAAGCCATCTTGGACGCAGCGTCCCAGAAGATA...CGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACATATCTTCTGGGACGCTaGGTCCAAGATGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTYLLGR*VQDGFD
Trigger: GTCAAAGCCATCTTGGACGCAGCGTCCCAGAAGATA...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGATGTCTGTGAAGGTTaGTATCTTCTGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: WPPSLQLDELLSTADPGLDVCEG*YLLGRC
Trigger: GCAGCGTCCCAGAAGATAGCAACCTTCACAGACATC...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp TCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGTTGTTCCCAATGAGCTaGTCGCCGTCCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: SLQLDELLSTADPGLDSALFPMS*SPSRDR
Trigger: CCTGTCTCTGGACGGCGAGCAGCTCATTGGGAACAA...CGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGAGAAAGAAACTATGCAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGCACGGGCCGCGTCTaGCTGGCCGCCAGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RERNYAEGIATRCGGGSGCTGRV*LAASFF
Trigger: GAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCA...GCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGCATAGTTTCTTTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGCAGAGCCTCGCCGAATaGCTGGGGAGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAQSLAE*LGRGRA
Trigger: CGCCCTGCCCCTCCCCAGGCATTCGGCGAGGCTCTG...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCACCCCCTCGCAGTTCCTaGTGTATTTCAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAPPRSS*CISAFP
Trigger: AGGAAATGCTGAAATACAGCAGGAACTGCGAGGGGG...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCGGGCCCTTGGCAGCGTCACGGGTGGGCTCGGGGCACGTGGGCCTTACCTGAGCATGACAGTCAACATTaGTGTCTGCCGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: PGPWQRHGWARGTWALPEHDSQH*CLPTAN
Trigger: GTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATG...CTCAGGTAAGGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCAAGGGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp CCCAAACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCCCTGGCTTCAACCCATaGTGGGCGGGGAGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: PKPLQTAPWDQRLSLASTPGFNP*WAGRPG
Trigger: ACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCCAGG...GGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp GATCAACGCCTTAGCCTGGCTTCAACCCATGCTGGGCGGGGAGGCCGGGTCTGTGATAGACCCGCTGGCTaGGCACCCTCTGCGCTAGTG +
Preference number: 4 (lower is better)
Translates to: DQRLSLASTHAGRGGRVCDRPAG*APSALV
Trigger: CACTAGCGCAGAGGGTGCGCAGCCAGCGGGTCTATC...ACAGACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCCAGGCTAAGGCGTTGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp CCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCGGGGGTGCAAGGAGATaGCTCATCCTAAAGACTTCG +
Preference number: 4 (lower is better)
Translates to: PPRRGAERCRGGARRCLIGGARR*LILKTS
Trigger: CGAAGTCTTTAGGATGAGGCATCTCCTTGCACCCCC...GATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGGGTGCCTCCAGTGAGTaGGACGTTTTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLGASSE*DVLLQP
Trigger: AGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACC...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCACGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SLPWLCARCPVLESRLPARPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPRPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGTATGGTCGGCAGCACTaGTCCACGCCACACCCTGCA +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQYGRQH*STPHPA
Trigger: TGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATA...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCGGGCTCTCTGAGCTATaGTCGGCAGCACTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHAGLSEL*SAALVH
Trigger: GTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCC...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTGGGCTCTCTGAGCTATaGTCGGCAGCACTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSGLSEL*SAALVH
Trigger: GTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCC...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTTTCTTTAGCTGGTCCTaGATGTCGGCAGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTFFSWS*MSAAQS
Trigger: GCTCTGTGCTGCCGACATCCAGGACCAGCTAAAGAA...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGTCGACTGGACGTCATTaGGCAGCTCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARSTGRH*AALFQP
Trigger: TGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGA...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGACTGAGCTTGTCGACTaGACGTCATTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGTELVD*TSLGSS
Trigger: AGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGT...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp GCAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCAAGGTTGCTATCTTCTaGGACGCTGCGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: AEGIATRCGGGSGCRREGKVAIF*DAASKM
Trigger: CATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTT...GCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGAGCTCCTGGCACTTTaGGCGGATGGAGTCTACCGC +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPELLAL*ADGVYR
Trigger: GCGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCGAGCTCCTGGCACTTTaGGCGGATGGAGTCTACCGC +
Preference number: 4 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVELLAL*ADGVYR
Trigger: GCGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTC...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCAACTTCTCGATTTCCTaGAGGGCAGCCTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSNFSIS*RAASAP
Trigger: CGGCGCGGAGGCTGCCCTCCAGGAAATCGAGAAGTT...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGAACTTCTCGATTTCCTaGAGGGCAGCCTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPNFSIS*RAASAP
Trigger: CGGCGCGGAGGCTGCCCTCCAGGAAATCGAGAAGTT...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAAACTTCTCGATTTCCTaGAGGGCAGCCTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPNFSIS*RAASAP
Trigger: CGGCGCGGAGGCTGCCCTCCAGGAAATCGAGAAGTT...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGATCGCGTTGAGCTCCTaGATCTTATTTTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGIALSS*ILFSAP
Trigger: CGGTGCGGAAAATAAGATCCAGGAGCTCAACGCGAT...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTATCGCGTTGAGCTCCTaGATCTTATTTTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLIALSS*ILFSAP
Trigger: CGGTGCGGAAAATAAGATCCAGGAGCTCAACGCGAT...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTTTTCTCTGGCATTCCTaGAAAAACGGGCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: EGPRRLRVARSAEAPSGAFLWHS*KNGQSE
Trigger: CTCCGACTGCCCGTTTTTCCAGGAATGCCAGAGAAA...AGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCTCAGGATGCCCAGGATaGAGCTCAGCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHASGCPG*SSAPPA
Trigger: TGCAGGAGGCGCTGAGCTCCATCCTGGGCATCCTGA...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTTCAGGATGCCCAGGATaGAGCTCAGCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSSGCPG*SSAPPA
Trigger: TGCAGGAGGCGCTGAGCTCCATCCTGGGCATCCTGA...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGTGCACTGCGGCCCTaGAAACCCCGACTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSSALRP*KPRLLR
Trigger: TCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCACT...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCAGGCTGCTCCCTCCCGTaGCTCTGTGCACGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPGCSLP*LCARCP
Trigger: TGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCC...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCTCATTGGGCCGTTGTaGGGAAGAATAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPLIGPL*GRITVA
Trigger: AGCAACAGTTATTCTTCCCCACAACGGCCCAATGAG...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTTGGCAGCGTCACGGGTaGGCTCGGGGCACGTGGGCC +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGWQRHG*ARGTWA
Trigger: GGCCCACGTGCCCCGAGCCCACCCGTGACGCTGCCA...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp TCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATTTCCCAAGCATCTGCTaGAAACGGGAGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SAAARGREVPWGCKEMPHFPSIC*KRERRQ
Trigger: CTGCCTCCTCTCCCGTTTCCAGCAGATGCTTGGGAA...ATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp CCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCGCATGGCTACGGTGCTaGGAGAAAATCCCCAAGACT +
Preference number: 4 (lower is better)
Translates to: PPRRGAERCRGGARRCLIAWLRC*EKIPKT
Trigger: AGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGC...GATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp TCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATTCACTCGTGGTGGCATaGCTACGGTGCTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SAAARGREVPWGCKEMPHSLVVA*LRCWEK
Trigger: TTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGA...ATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGCGCTGGGTCCATGCGTaGGTCCGTGGCTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVRWVHA*VRGWPG
Trigger: CCCCGGCCAGCCACGGACCCACGCATGGACCCAGCG...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp GCTGAGCGTACTGTCTGTGAGCAGCAGGGGCCGGTAGGGGAGGATTCTCCCATTCGAGGAGGCGCGGCATaGAGTCCAGGGTGGAAGCCC +
Preference number: 4 (lower is better)
Translates to: AERTVCEQQGPVGEDSPIRGGAA*SPGWKP
Trigger: GGGCTTCCACCCTGGACTCCATGCCGCGCCTCCTCG...AATGGGAGAATCCTCCCCTACCGGCCCCTGCTGCTCACAGACAGTACGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp GCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTGCGAGACGGCGGTGGGGAGGGAACTGACGGCGACAGCTaGGGAACGTCCCAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: ASFERSPLAVLRDGGGEGTDGDS*GTSQVR
Trigger: CCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGT...TCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 72 bp GCTAAAGAGACCCCGTGCCCCGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AKETPCPALLRP*ARGSSTSPEAA
Trigger: AGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGACTTTGTCAGTGGCGCTaGGCTGACGTATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGLCQWR*ADVSLQ
Trigger: CTGGAGGGATACGTCAGCTCAGCGCCACTGACAAAG...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCCTCAGGTGCCTCCAGTaGGTGGGACGTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSLRCLQ*VGRFAP
Trigger: TGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAG...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCACCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: LRVARSAEAPSGAGLADAPSASP*GRNFRW
Trigger: CCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGG...TGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGTGCTCCAGTTTCTGCTaGTGCTTTGCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGCSSFC*CFAQNS
Trigger: TGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCA...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp CCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTTGTTGCCGATGTCTGTaGAGGTTGCTATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRRLRVARSAEAPSGAGLCCRCL*RLLSSG
Trigger: CCCAGAAGATAGCAACCTTCACAGACATCGGCAACA...AAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACTCCACGGCCACGCCTaGTTTCTCCTCGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPLHGHA*FLLEAG
Trigger: GCCAGCTTCGAGGAGAAATCAGGCGTGGCCGTGGAG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCAGGTCGGTCCAGACGCTaGACGAGCCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPGRSRR*TSPASA
Trigger: TGCTGATGCAGGGCTCGTTCAGCGTCTGGACCGACC...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGGTCATCATCGCCGTCTaGCAGAAGAAAGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLVIIAV*QKKAKR
Trigger: CCGCTTTGCTTTCTTCTGTCAGACGGCGATGATGAC...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACGTGTCGGCTGCATTGTaGTTCTGTAATGGTTCCACT +
Preference number: 4 (lower is better)
Translates to: PPSLQLDELLSTADPGLDVSAAL*FCNGST
Trigger: AGTGGAACCATTACAGAATCACAATGCAGCCGACAC...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR TCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGTGACTTGTCACGTCTaGTCCGATGCTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSVTCHV*SDALPG
Trigger: GCCTGGAAGAGCATCGGATCAGACGTGACAAGTCAC...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACTGTCGACACCAATCTaGGCTGGCCGTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPLSTPI*AGRGCS
Trigger: GGAGCAGCCACGGCCAGCTCAGATTGGTGTCGACAG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGATCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTAATCCCCAAGACTTCTaGAGGTTCCCAAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GSAAARGREVPWGCKEMPNPQDF*RFPSIC
Trigger: GCAGATGCTTGGGAACCTTCAGAAGTCTTGGGGATT...AGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGGATCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR TCA 90 bp CAGGGCGGTAGCCTGGCTGGATTCTGGATCTGTTCTGGAGGCACAGCCAACAGGCACAAGCCAGGGGACTaGGATCGCCGAGGGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QGGSLAGFWICSGGTANRHKPGD*DRRGAV
Trigger: CACAGCCCCTCGGCGATCTCAGTCCCCTGGCTTGTG...CCTGTTGGCTGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCTACCGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCTTGCAGAAGAGCACTaGCTTCTCGTGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLLAEEH*LLVQEQ
Trigger: CTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAG...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGCTTGCAGAAGAGCACTaGCTTCTCGTGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTLAEEH*LLVQEQ
Trigger: CTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAG...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGCCGGACGGACAGGCTaGTGGCCGGCACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQAGRTG*WPAPSP
Trigger: AGGGCTGGGTGCCGGCCAGCAGCCTGTCCGTCCGGC...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAGTGGGGGCGGTGAGGTaGCCCTTCCTCGGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEVGAVR*PFLGAS
Trigger: GGACGCCCCGAGGAAGGGGCACCTCACCGCCCCCAC...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCATCCTTGGCTTCTAACTaGTTTTGGTGGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSASLASN*FWWWRH
Trigger: GTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGA...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCTGCCGAGTCTCTGCATaGTTCCTATTTGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: WPPSLQLDELLSTADPGLCRVSA*FLFDSA
Trigger: TGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCA...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGCATCAGAGGAAAAGCTaGCGAGTCTCTGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRHQRKS*RVSACF
Trigger: GAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATG...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCGGAGGCACCGCGCCTaGACAGTACATCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRRRHRA*TVHQGH
Trigger: ATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCG...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGGGAACACCTCCTCCATaGTTGCCTGCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQGTPPP*LPASGR
Trigger: TCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCC...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCCCCCTCGCAGTTCCTaGTGTATTTCAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTPPRSS*CISAFP
Trigger: AGGAAATGCTGAAATACAGCAGGAACTGCGAGGGGG...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCCCTGCATCAGCAGCTTaGCCAGGTCGCCGAGATTCC +
Preference number: 4 (lower is better)
Translates to: SCATRRRHRACTVHQGHRPASAA*PGRRDS
Trigger: GGAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGG...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACAGAAGAAAGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCCTGCATCAGCAGCTTaGCCAGGTCGCCGAGATTCC +
Preference number: 4 (lower is better)
Translates to: TEESKAVARCLSRTLGPAPASAA*PGRRDS
Trigger: GGAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGG...GGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTAAGAGAAAGAAACTATaGAGAGGGCATCGCAACCCG +
Preference number: 4 (lower is better)
Translates to: RREGPRRLRVARSAEAPSKRKKL*RGHRNP
Trigger: CGGGTTGCGATGCCCTCTGCATAGTTTCTTTCTCTT...AGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCATGTGCAAGCACAGTaGACTGCGGCCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSHVQAQ*TAALET
Trigger: GGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATG...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCAGAAAGCAAAGCGGTTaGTCGGTGCCTGAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVRKQSG*SVPEPH
Trigger: GTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCT...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGTTCCTCTGCTGCCTTTaGGTTTCTGACACGCACAAC +
Preference number: 4 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRFLCCL*VSDTHN
Trigger: GTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAA...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCGTCAACATTGCTGTCTaGCGACTGCCAACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAVNIAV*RLPTLL
Trigger: CAGCAAAGTTGGCAGTCGGCAGACAGCAATGTTGAC...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGTGAGTGGGACGTTTTaGTCCAACCTCGCACACCAA +
Preference number: 4 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTVSGTF*SNLAHQ
Trigger: TTGGTGTGCGAGGTTGGAGCAAAACGTCCCACTCAC...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397017.6
CDS-3UTR GCA 90 bp CGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCCGCTCAGGGACAGGCTTaGACCAAAACGATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: RRGEGQRGAVGVQGDASSAQGQA*TKTMKV
Trigger: AACCTTCATCGTTTTGGTGCAAGCCTGTCCCTGAGC...GGATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp AGGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCTTTAATCTCAGGAGTTaGCGCCTGGACGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RGRVGSGVEVRPPRRLQCFNLRS*RLDDVD
Trigger: GTCTACATCGTCCAGGCGCCAACTCCTGAGATTAAA...GCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGTTGAGGGACTGGTGCTaGTCGGGGCCGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLLRDWC*SGPAGA
Trigger: TGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTCAA...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGGTGCCTCCAGTGAGTaGGACGTTTTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSGASSE*DVLLQP
Trigger: AGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLSEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCATCTAACTGCTTTTGGTaGTGGAGACACCACCTGATG +
Preference number: 4 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSASNCFW*WRHHLM
Trigger: CATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGA...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGGCGTGGGGAGTGGAGTaGAGGTGCGGCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLAWGVE*RCGLRG
Trigger: TCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGC...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCCTTCTGTACTCAAGGTaGTCACCAGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSLLYSR*SPGGRW
Trigger: CCACCTGCCACCTGGTGACCACCTTGAGTACAGAAG...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGTTGTCAAGCTGGTCCTaGTTCACACTGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLLSSWS*FTLGSE
Trigger: CTCAGAGCCCAGTGTGAACCAGGACCAGCTTGACAA...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGAGCCTCTGCACGGTaGCCTGGTTGTCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SCATRRRHRACTVHQGHRGASAR*PGCQAG
Trigger: ACCAGCTTGACAACCAGGCCACCGTGCAGAGGCTCC...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGAAAGGTTGCTATCTTCTaGGACGCTGCGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: EGGLAALAAAGRVAQHGRKVAIF*DAASKM
Trigger: CATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTT...TCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCACCAGCTTCTTCAGGCTaGCCTGCCTGCGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEAPASSG*PACGGT
Trigger: TGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGG...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCTCTTCCAACCAGTTCTaGGCAGTCAGTGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRSSNQF*AVSVVF
Trigger: GAAAACTACACTGACTGCCCAGAACTGGTTGGAAGA...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGTTTCTCTGGCATTCCTaGAAAAACGGGCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: LQLDELLSTADPGLDSAGFLWHS*KNGQSE
Trigger: CTCCGACTGCCCGTTTTTCCAGGAATGCCAGAGAAA...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGATCCTTCACCTTGGTGTaGCCCCTCTTGTGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGSFTLV*PLLWSV
Trigger: GACCGACCACAAGAGGGGCCACACCAAGGTGAAGGA...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCCTTTTTGGCCTCATTaGGCCGTTGTGGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTPFWPH*AVVGKN
Trigger: ATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGG...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCCCGTTTCCTCCTTTTTaGCCTCATTGGGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGPFPPF*PHWAVV
Trigger: CACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGG...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCAGCGGGACGATGTCCTaGTGCATGATTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGSGTMS*CMISSV
Trigger: CACAGATGAAATCATGCACCAGGACATCGTCCCGCT...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CCA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTGGCTTCAACCCATGCTaGGCGGGGAGGCCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGGFNPC*AGRPGL
Trigger: CAGACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCC...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp AGTCAGGGTCAGGAACGGGGATCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGTTAAGGATTCACTCGTaGTGGCATGGCTACGGTGCT +
Preference number: 4 (lower is better)
Translates to: SQGQERGSAAARGREVPWLRIHS*WHGYGA
Trigger: AGCACCGTAGCCATGCCACCACGAGTGAATCCTTAA...CCACGGCACCTCTCTGCCCCTCGCCGCGGCGGATCCCCGTTCCTGACCCTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR TCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGCACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCAGGTGGAGACACCACCTaGTGTCACCCACGGACACGT +
Preference number: 4 (lower is better)
Translates to: SLPWLCARCPVLESRLPAGGDTT*CHPRTR
Trigger: ACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACC...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAGGAACCGTGAGGCTGTaGGGCGGCCCTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEGTVRL*GGPPSS
Trigger: GCTGCTGGGAGGGCCGCCTCACAGCCTCACGGTTCC...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSGLSPG*IRCQRP
Trigger: AGGACGCTGGCATCGGATTCATCCTGGTGATAGACC...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSGLSPG*IRCQRP
Trigger: AGGACGCTGGCATCGGATTCATCCTGGTGATAGACC...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPPSASP*GRNFRW
Trigger: CCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGG...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCCCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSPSASP*GRNFRW
Trigger: CCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGG...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAAGGACTGCAGCATCTaGGCCGTCTGCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHAKDCSI*AVCFTM
Trigger: CATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTT...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCTGCTCCAGTTTCTGCTaGTGCTTTGCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSCSSFC*CFAQNS
Trigger: TGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCA...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR TCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCACTCCACGGCCACGCCTaGTTTCTCCTCGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEALHGHA*FLLEAG
Trigger: GCCAGCTTCGAGGAGAAATCAGGCGTGGCCGTGGAG...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGCTTGTCCACAGGTTGTaGGGCCAGCAGGTAAATCCC +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPLVHRL*GQQVNP
Trigger: GGGATTTACCTGCTGGCCTCACAACCTGTGGACAAG...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCCTTGTAAATCGCGTTaGGCTCCTGGATCTTATTTT +
Preference number: 4 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPPCKSR*APGSYF
Trigger: AAAATAAGATCCAGGAGCTCAACGCGATTTACAAGG...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGCCTGTTGACAGGAGGTaGGCCATCAGTGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPPVDRR*AISGLS
Trigger: GGATAACCCACTGATGGCTCACCTCCTGTCAACAGG...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCGTTGTGAAGGCCTGTTaGCAGGAGGTGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSVVKAC*QEVSHQ
Trigger: CTGATGGCTCACCTCCTGTCAACAGGCCTTCACAAC...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGAGTTTTCCAGCTCCCTaGGGAATATCCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRSFPAP*GISCCG
Trigger: TCCACAACAGGATATTCCTCAGGGAGCTGGAAAACT...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGATTTCAGCATTTCCTTaGGCAGCAGCTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARISAFP*AAAGTW
Trigger: CCAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAAT...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGATTTCAGCATTTCCTTaGGCAGCAGCTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGISAFP*AAAGTW
Trigger: CCAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAAT...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGAGACGTTCTGTGTCTTaGCAGACAAAGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLRRSVS*QTKADG
Trigger: GCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCT...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGCTCTATGAACTGTCCTaGATCCCATTTCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQLYELS*IPFQVI
Trigger: GATGACCTGAAATGGGATTCAGGACAGTTCATAGAG...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAATGGCTTATGAGTTCCTaGTTGCCACGCAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: PCPALLRPLARGSSTSPEWLMSS*LPRSPL
Trigger: AAGGGGGCTGCGTGGCAATCAGGAACTCATAAGCCA...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCATGGCTTATGAGTTCCTaGTTGCCACGCAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPWLMSS*LPRSPL
Trigger: AAGGGGGCTGCGTGGCAATCAGGAACTCATAAGCCA...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTGCGAGACGGCGGTGGGGAGGGAGCCTCCGGTGTGTCTTaGACAAGCCTGATGACGTCA +
Preference number: 4 (lower is better)
Translates to: ASFERSPLAVLRDGGGEGASGVS*TSLMTS
Trigger: TGACGTCATCAGGCTTGTTCAAGACACACCGGAGGC...TCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp GCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCCTAAACGACAGCCACATCTGTaGCAGAGACCACACTTGCGC +
Preference number: 4 (lower is better)
Translates to: AARGREVPWGCKEMPHPKRQPHL*QRPHLR
Trigger: GCGCAAGTGTGGTCTCTGTCACAGATGTGGCTGTCG...TTTAGGATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR GCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGTCTCCTCCCTCTTCTTaGAGAAGAGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLSPPSS*RRALPS
Trigger: AGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGA...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGCTTCTCTACAAGCCTaGAGCTGGCTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPASLQA*SWLVST
Trigger: AGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGAGCTTCTCTACAAGCCTaGAGCTGGCTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGASLQA*SWLVST
Trigger: AGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGC...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTCTCTTGAGGGACTGGTaGTGGTCGGGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGLLRDW*WSGPAG
Trigger: CCCTGCCGGCCCCGACCAGCACCAGTCCCTCAAGAG...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIPGRPR*SWTSCS
Trigger: TGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGGCCTCCGAGGAGGCTaGAGTGCAGTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWGLRGG*SAVRQG
Trigger: CCCCTGCCTCACTGCACTGCAGCCTCCTCGGAGGCC...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCGACGAGCTGCAGGTTTaGCGGGAAAGATGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSDELQV*RERCCD
Trigger: ATCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTC...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCACGAGGACGAGCTaGAGGTTTGCCGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSSTRTS*RFAGKD
Trigger: ATCTTTCCCGGCAAACCTGCAGCTCGTCCTCGTGCT...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAAGCACGAGGACGAGCTaGAGGTTTGCCGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PCPALLRPLARGSSTSPESTRTS*RFAGKD
Trigger: ATCTTTCCCGGCAAACCTGCAGCTCGTCCTCGTGCT...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTTTTCTGCTGATGCTTTaGCCAGAACTCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTFLLML*PELIEG
Trigger: GCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAA...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCAAGCCCTGCTCAAAGTaGCGGAGCTGCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: SCATRRRHRACTVHQGHRKPCSK*RSCRHC
Trigger: GCAGTGTCTGCAGCTCCGGCACTTTGAGCAGGGCTT...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGATGTCTGTGAAGGTTaGTATCTTCTGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RVARSAEAPSGAGLADAGDVCEG*YLLGRC
Trigger: GCAGCGTCCCAGAAGATAGCAACCTTCACAGACATC...CCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGATTGTTCCCAATGAGCTaGTCGCCGTCCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGLFPMS*SPSRDR
Trigger: CCTGTCTCTGGACGGCGAGCAGCTCATTGGGAACAA...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGAGCAATGAACTGGTCACAGAGGTaGCGGAGCTCCTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: RPRLLLGLALLMQGCRAMNWSQR*RSSWHF
Trigger: AAAGTGCCAGGAGCTCCGGCACCTCTGTGACCAGTT...CATTGCTCTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAACTGGTCACAGAGGTaGCGGAGCTCCTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHANWSQR*RSSWHF
Trigger: AAAGTGCCAGGAGCTCCGGCACCTCTGTGACCAGTT...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAAACTGGTCACAGAGGTaGCGGAGCTCCTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPNWSQR*RSSWHF
Trigger: AAAGTGCCAGGAGCTCCGGCACCTCTGTGACCAGTT...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGCGACTTTGCCAGTaGCTCGGGTCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGGRLCQ*LGSGGH
Trigger: GTGGCCCCCAGACCCGAGGCACTGGCAAAGTCGCCC...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAACAGAGCCTCGCCGAATaGCTGGGGAGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEQSLAE*LGRGRA
Trigger: CGCCCTGCCCCTCCCCAGGCATTCGGCGAGGCTCTG...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCCCCCCTCGCAGTTCCTaGTGTATTTCAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: DELLSTADPGLDSAGRSGPPRSS*CISAFP
Trigger: AGGAAATGCTGAAATACAGCAGGAACTGCGAGGGGG...GCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGTTGCTGTCTGCCGACTaGCAACTTTGCTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRLLSAD*QLCCVL
Trigger: CAAAACACAGCAAAGTTGGCAGTCGGCAGACAGCAA...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGGGGAAGAATAACTGTTaGTTCCAGGTCTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGGKNNC*FQVSCT
Trigger: TGTGCAAGAGACCTGGAAGCAACAGTTATTCTTCCC...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR GCA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTGGACGCTGGGGTGAATaGTCAGGCCTGCCCCAAACC +
Preference number: 4 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTGRWGE*SGLPQT
Trigger: GGTTTGGGGCAGGCCTGAGCATTCACCCCAGCGTCC...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGGGGTCGCTGGGTCCATaGGTGGGTCCGTGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKGSLGP*VGPWLA
Trigger: GGCCAGCCACGGACCCACGCATGGACCCAGCGACCC...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp AGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTTTTAATCTCAGGAGTTaGCGCCTGGACGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RRLRVARSAEAPSGAGLAFNLRS*RLDDVD
Trigger: GTCTACATCGTCCAGGCGCCAACTCCTGAGATTAAA...AGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGTTTAATCTCAGGAGTTaGCGCCTGGACGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPFNLRS*RLDDVD
Trigger: GTCTACATCGTCCAGGCGCCAACTCCTGAGATTAAA...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCCTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSLQACS*LVSTFR
Trigger: TCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAG...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGAGGTGCCTCCAGTGAGTaGGACGTTTTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGGASSE*DVLLQP
Trigger: AGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACC...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGACCGTGTATTTACCTaGAACCAGCTTCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSDRVFT*NQLLGA
Trigger: GGCCCCAAGAAGCTGGTTCCAGGTAAATACACGGTC...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGACCGTGTATTTACCTaGAACCAGCTTCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSDRVFT*NQLLGA
Trigger: GGCCCCAAGAAGCTGGTTCCAGGTAAATACACGGTC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGACCGTGTATTTACCTaGAACCAGCTTCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSDRVFT*NQLLGA
Trigger: GGCCCCAAGAAGCTGGTTCCAGGTAAATACACGGTC...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIELLRH*AEPDGP
Trigger: CGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPANCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTGGGGCGCGTGGGGAGTaGAGTGGAGGTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGGARGE*SGGAAS
Trigger: GGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCTCACCAGGTGGCAGGTaGACCTGGGTGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAISPGGR*TWVGGR
Trigger: CCTGCCTCCCACCCAGGTCCACCTGCCACCTGGTGA...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCAGCGGGACGATGTCCTaGTGCATGATTTCATCTGCG +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSSGTMS*CMISSA
Trigger: CGCAGATGAAATCATGCACCAGGACATCGTCCCGCT...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR CCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCAGGAGCCTCTGCACGGTaGCCTGGTTGTCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLPWLCARCPVLESRLPAGASAR*PGCQAG
Trigger: ACCAGCTTGACAACCAGGCCACCGTGCAGAGGCTCC...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACTGGCCTGCCTGCGGTaGAACACCTCCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPLACLR*NTSSML
Trigger: AAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGAGGTGAGCCATCAGTaGGTTATCCATCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEAEVSHQ*VIHLRG
Trigger: GCCGCGGAGATGGATAACCCACTGATGGCTCACCTC...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCTCTTCCAACCAGTTCTaGGCAGTCAGTGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QRASQPDAEAGPAVAGRASSNQF*AVSVVF
Trigger: GAAAACTACACTGACTGCCCAGAACTGGTTGGAAGA...GGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCTCTTCCAACCAGTTCTaGGCAGTCAGTGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: WPPSLQLDELLSTADPGLSSNQF*AVSVVF
Trigger: GAAAACTACACTGACTGCCCAGAACTGGTTGGAAGA...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGTTTCTCTGGCATTCCTaGAAAAACGGGCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRFLWHS*KNGQSE
Trigger: CTCCGACTGCCCGTTTTTCCAGGAATGCCAGAGAAA...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCCCTCGCCCGGGCCCTTaGCAGCGTCACGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFPRPGP*QRHGWA
Trigger: AGCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGG...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGTCTGCGAGACGGCGGTaGGGAGGGACAGGCGCAGAG +
Preference number: 4 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSSARRR*GGTGAE
Trigger: CTCTGCGCCTGTCCCTCCCCACCGCCGTCTCGCAGA...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCAGCGGGACGATGTCCTaGTGCATGATTTCATCCGTG +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSSGTMS*CMISSV
Trigger: CACGGATGAAATCATGCACCAGGACATCGTCCCGCT...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS-3UTR TCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATCCCCGGGCTCGACTCTaGGCTGCTCAGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHPRARL*AAQALG
Trigger: GCCCAGTGCCTGAGCAGCTCAGAGTCGAGCCCGGGG...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAATGCATGCTTCCTATTTaGTTCCGCACCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PCPALLRPLARGSSTSPECMLPI*FRTLEV
Trigger: GACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCA...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACGATGTCCTGGTGCATaGTTTCATCTGCGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPRCPGA*FHLRRP
Trigger: AGGCCGGCGCAGATGAAATCATGCACCAGGACATCG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR TCA 90 bp CACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATGCTCCAGTTTCTGCTaGTGCTTTGCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: HKGAQLCDETEAPRLHSTCSSFC*CFAQNS
Trigger: TGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCA...TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTGTTGCCGATGTCTGTaGAGGTTGCTATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSCCRCL*RLLSSG
Trigger: CCCAGAAGATAGCAACCTTCACAGACATCGGCAACA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAACATCCTTCTTGTTGTaGAGGCCTGTTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LRVARSAEAPSGAGLADATSFLL*RPVDRR
Trigger: CCTCCTGTCAACAGGCCTTCACAACAAGAAGGATGT...TGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGAGTTTTCCAGCTCCCTaGGGAATATCCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTSFPAP*GISCCG
Trigger: TCCACAACAGGATATTCCTCAGGGAGCTGGAAAACT...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGAGTTTTCCAGCTCCCTaGGGAATATCCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLSFPAP*GISCCG
Trigger: TCCACAACAGGATATTCCTCAGGGAGCTGGAAAACT...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGTCATCATCGCCGTCTaGCAGAAGAAAGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPVIIAV*QKKAKR
Trigger: CCGCTTTGCTTTCTTCTGTCAGACGGCGATGATGAC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCTGTCGACACCAATCTaGGCTGGCCGTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAILSTPI*AGRGCS
Trigger: GGAGCAGCCACGGCCAGCTCAGATTGGTGTCGACAG...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTGCGGCCGCAAGGAGCTaGGATTGCACCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGAAARS*DCTTAL
Trigger: GAGTGCAGTGGTGCAATCTCAGCTCCTTGCGGCCGC...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCATGCTCCAGCGCCCGGTaGTGGCTGGCTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEACSSAR*WLASLQ
Trigger: TTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCA...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGACTCTTGAGGGACTGGTaGTGGTCGGGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGLLRDW*WSGPAG
Trigger: CCCTGCCGGCCCCGACCAGCACCAGTCCCTCAAGAG...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGTGAGTGGGACGTTTTaGTCCAACCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSVSGTF*SNLCPF
Trigger: AAAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCAC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR GCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLCSWTS*SARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCA...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATAGGCCGCGCTACCCCTaGAGGTCGGAGAAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHRPRYP*RSEKGA
Trigger: GGCCCCCTTCTCCGACCTGCAGGGGTAGCGCGGCCT...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGGCCTCCGAGGAGGCTaGAGTGCAGTGAGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGGLRGG*SAVRQG
Trigger: CCCCTGCCTCACTGCACTGCAGCCTCCTCGGAGGCC...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCACGGAGGCACCGCGCCTaGACAGTACATCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEARRHRA*TVHQGH
Trigger: ATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCG...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAAGCACGAGGACGAGCTaGAGGTTTGCCGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEASTRTS*RFAGKD
Trigger: ATCTTTCCCGGCAAACCTGCAGCTCGTCCTCGTGCT...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCGTGCCCCTCTTTCAGTaGCAGCCTCAAATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHAVPLFQ*QPQILL
Trigger: AAGGAGGATTTGAGGCTGGCACTGAAAGAGGGGCAC...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCGTGCCCCTCTTTCAGTaGCAGCCTCAAATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSVPLFQ*QPQILL
Trigger: AAGGAGGATTTGAGGCTGGCACTGAAAGAGGGGCAC...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGTTTCTGCTGATGCTTTaGCCAGAACTCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQFLLML*PELIEG
Trigger: GCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAA...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCAAAGCCCTGCTCAAAGTaGCGGAGCTGCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: SLPWLCARCPVLESRLPAKPCSK*RSCRHC
Trigger: GCAGTGTCTGCAGCTCCGGCACTTTGAGCAGGGCTT...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGGAACACCTCCTCCATaGTTGCCTGCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPGTPPP*LPASGR
Trigger: TCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGGGCGACTTTGCCAGTaGCTCGGGTCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGGRLCQ*LGSGGH
Trigger: GTGGCCCCCAGACCCGAGGCACTGGCAAAGTCGCCC...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCAACGCTGAACGAGCCCTaGATCAGCAGCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEATLNEP*ISSLPR
Trigger: CCTGGGCAAGCTGCTGATGCAGGGCTCGTTCAGCGT...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGCATGAAGCTGTAAAGTaGCTTTATGGGGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTHEAVK*LYGEGH
Trigger: GTGACCCTCCCCATAAAGGCACTTTACAGCTTCATG...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGTCAGGTCATCGATACTaGTACACCAGCTTTCTTATG +
Preference number: 4 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGSGHRY*YTSFLM
Trigger: CATAAGAAAGCTGGTGTAGCAGTATCGATGACCTGA...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp GATCAACGCCTTAGCCTGGCTTCAACCCATGCTGGGCGGGGAGGCCGGGTCTGTTCACTGTGGACGAGATaGCGAGACCTCTGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: DQRLSLASTHAGRGGRVCSLWTR*RDLCGH
Trigger: ATGGCCACAGAGGTCTCGGCATCTCGTCCACAGTGA...ACAGACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCCAGGCTAAGGCGTTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp GATCAACGCCTTAGCCTGGCTTCAACCCATGCTGGGCGGGGAGGCCGGGTCTGTGCCGGGGTGTCAAAGTaGATGCCTGTAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: DQRLSLASTHAGRGGRVCAGVSK*MPVIPA
Trigger: AGCTGGGATTACAGGCATGCACTTTGACACCCCGGC...ACAGACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCCAGGCTAAGGCGTTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGGTGAGTGGGACGTTTTaGTCCAACCTCGCACACCAA +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQVSGTF*SNLAHQ
Trigger: TTGGTGTGCGAGGTTGGAGCAAAACGTCCCACTCAC...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000453297.5
CDS-3UTR CCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGCGCCCGGTGCTGGCTaGCTTCTCTACAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIAPGAG*LLYKPA
Trigger: TGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGGCGCCCGGTGCTGGCTaGCTTCTCTACAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLAPGAG*LLYKPA
Trigger: TGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGC...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGATTGAGGGACTGGTGCTaGTCGGGGCCGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGLRDWC*SGPAGA
Trigger: TGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTCAA...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCGACCGTGTATTTACCTaGAACCAGCTTCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSDRVFT*NQLLGA
Trigger: GGCCCCAAGAAGCTGGTTCCAGGTAAATACACGGTC...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGACCGTGTATTTACCTaGAACCAGCTTCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PCPALLRPLARGSSTSPEDRVFT*NQLLGA
Trigger: GGCCCCAAGAAGCTGGTTCCAGGTAAATACACGGTC...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCTTCTTTAGCTGGTCCTaGATGTCGGCAGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHAFFSWS*MSAAQS
Trigger: GCTCTGTGCTGCCGACATCCAGGACCAGCTAAAGAA...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCACTGAGCTTGTCGACTaGACGTCATTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSTELVD*TSLGSS
Trigger: AGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGT...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGACTGAGCTTGTCGACTaGACGTCATTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPTELVD*TSLGSS
Trigger: AGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGT...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAATTTCTCCTCGAAGCTaGCCAGGTCCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEAISPRS*PGPSAG
Trigger: ACCTGCTGAGGGACCTGGCCAGCTTCGAGGAGAAAT...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGAGAAAGAAACTATGCAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCGAGCTCCTGGCACTTTaGGCGGATGGAGTCTACCGC +
Preference number: 4 (lower is better)
Translates to: RERNYAEGIATRCGGGSGELLAL*ADGVYR
Trigger: GCGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTC...GCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGCATAGTTTCTTTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGGCCTCCGCGCCGTCCTaGGACTGGCACTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLASAPS*DWHLST
Trigger: TGTGGACAAGTGCCAGTCCCAGGACGGCGCGGAGGC...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAATCGCGTTGAGCTCCTaGATCTTATTTTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: LRVARSAEAPSGAGLADAIALSS*ILFSAP
Trigger: CGGTGCGGAAAATAAGATCCAGGAGCTCAACGCGAT...TGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCATGCTTGCCTGCTTCTaGAAGACCTTTCGCACGTGC +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRMLACF*KTFRTC
Trigger: GCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCAT...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGATGCTTGCCTGCTTCTaGAAGACCTTTCGCACGTGC +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQMLACF*KTFRTC
Trigger: GCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCAT...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCACACTCATCTCACTCTTaGCCCTCCGGTAGGGCCCTC +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEAHSSHS*PSGRAL
Trigger: GAGGGCCCTACCGGAGGGCCAAGAGTGAGATGAGTG...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGTTTCTCTGGCATTCCTaGAAAAACGGGCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRFLWHS*KNGQSE
Trigger: CTCCGACTGCCCGTTTTTCCAGGAATGCCAGAGAAA...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATTATGCTCCCTTTTCTaGTCTGGAGAGTGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: HKGAQLCDETEAPRLHSTLCSLF*SGECRL
Trigger: CAGCCGACACTCTCCAGACCAGAAAAGGGAGCATAA...TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGGTGCTCCATGTGTGCTaGAAAATAACGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQVLHVC*KITQIS
Trigger: AGAAATCTGCGTTATTTTCCAGCACACATGGAGCAC...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTAGTGCCTCCCGAGACTaGCAGGACACCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTSASRD*QDTSSL
Trigger: CAGTGAGCTGGTGTCCTGCCAGTCTCGGGAGGCACT...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp GATCAACGCCTTAGCCTGGCTTCAACCCATGCTGGGCGGGGAGGCCGGGTCTGTATCAACGCCTTAGCCTaGCTTCAACCCATGCTGGGC +
Preference number: 4 (lower is better)
Translates to: DQRLSLASTHAGRGGRVCINALA*LQPMLG
Trigger: GCCCAGCATGGGTTGAAGCCAGGCTAAGGCGTTGAT...ACAGACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCCAGGCTAAGGCGTTGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp CGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTCCTCGAGGCTGGACCTaGATGCGCCTAGCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: RGTAHATASTQFAILALCPRGWT*MRLAGR
Trigger: ACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGAGG...ACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp GCTGAGCGTACTGTCTGTGAGCAGCAGGGGCCGGTAGGGGAGGATTCTCCCATTTATCTGGCGTCTATCTaGCGAGGAGGCGCGGCATGG +
Preference number: 4 (lower is better)
Translates to: AERTVCEQQGPVGEDSPIYLASI*RGGAAW
Trigger: CCATGCCGCGCCTCCTCGCCAGATAGACGCCAGATA...AATGGGAGAATCCTCCCCTACCGGCCCCTGCTGCTCACAGACAGTACGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCAGTGGTCGGGTCCCTaGCGTACCAGAGGCCCTCGT +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKQWSGP*RTRGPR
Trigger: ACGAGGGCCTCTGGTACGTCAGGGACCCGACCACTG...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000535094.7
CDS-3UTR TCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCTTCCTGGTGAAGAATTaGGGCCAAAGTACCACAAAA +
Preference number: 4 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGFLVKN*GQSTTK
Trigger: TTTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAA...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGCTGGGAGGGTAGCGTaGGGGGAATGCAGCCACGCC +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIAGRVA*GECSHA
Trigger: GGCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGTCCCGGCACAGCAGTaGCAGCCGGCGCACCGTCAT +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHVPAQQ*QPAHRH
Trigger: ATGACGGTGCGCCGGCTGTCACTGCTGTGCCGGGAC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR TCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACTTGTCCACAGGTTGTaGGGCCAGCAGGTAAATCCC +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPLVHRL*GQQVNP
Trigger: GGGATTTACCTGCTGGCCTCACAACCTGTGGACAAG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCCTTGTAAATCGCGTTaGGCTCCTGGATCTTATTTT +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTPCKSR*APGSYF
Trigger: AAAATAAGATCCAGGAGCTCAACGCGATTTACAAGG...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR TCA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCCCTTGTAAATCGCGTTaGGCTCCTGGATCTTATTTT +
Preference number: 4 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAPCKSR*APGSYF
Trigger: AAAATAAGATCCAGGAGCTCAACGCGATTTACAAGG...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGACATCCTTCTTGTTGTaGAGGCCTGTTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQTSFLL*RPVDRR
Trigger: CCTCCTGTCAACAGGCCTTCACAACAAGAAGGATGT...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGTTTCCGTCCCAACAATaGCTTACCATGTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: SGSSSTTVRASPESTVQRFPSQQ*LTMCKH
Trigger: GTGCTTGCACATGGTAAGTCATTGTTGGGACGGAAA...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCATGGTCTCTAAGCAGTaGCTTGTCACGTCTGATCCG +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSMVSKQ*LVTSDP
Trigger: CGGATCAGACGTGACAAGTCACTGCTTAGAGACCAT...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCATAGTCAGTGGCTTATaGGTTCCTGATTGCCACGCA +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSIVSGL*VPDCHA
Trigger: TGCGTGGCAATCAGGAACTCATAAGCCACTGACTAT...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCATAGTCAGTGGCTTATaGGTTCCTGATTGCCACGCA +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPIVSGL*VPDCHA
Trigger: TGCGTGGCAATCAGGAACTCATAAGCCACTGACTAT...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTGACACATCAATTTGGTaGTCCGTTTCCTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTDTSIW*SVSSFL
Trigger: CAAAAAGGAGGAAACGGATCACCAAATTGATGTGTC...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR TCA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGCCGACACAACAAAAATaGTCCTGGCAGATCCGCTTC +
Preference number: 4 (lower is better)
Translates to: FSGSSSTTVRASPESTVQPTQQK*SWQIRF
Trigger: GAAGCGGATCTGCCAGGATCATTTTTGTTGTGTCGG...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCTCCTCCCTCTTCTTaGAGAAGAGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSSPPSS*RRALPS
Trigger: AGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGA...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCTCCTCCCTCTTCTTaGAGAAGAGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPSPPSS*RRALPS
Trigger: AGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGA...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCAGCTTCTCTACAAGCCTaGAGCTGGCTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPASLQA*SWLVST
Trigger: AGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGC...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCTGCTCCAGCGCCCGGTaGTGGCTGGCTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAICSSAR*WLASLQ
Trigger: TTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCA...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGGRLCD*SSARCW
Trigger: CCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCC...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHGRLCD*SSARCW
Trigger: CCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCTCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHASDELI*SSALDQ
Trigger: CTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGA...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACATCAGAGGAAAAGCTaGCGAGTCTCTGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPHQRKS*RVSACF
Trigger: GAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATG...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGCGGAGGCACCGCGCCTaGACAGTACATCAGGGACAT +
Preference number: 4 (lower is better)
Translates to: EAVKCLYGEGHTRARSCARRHRA*TVHQGH
Trigger: ATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCG...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTTTCTGCTGATGCTTTaGCCAGAACTCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPFLLML*PELIEG
Trigger: GCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAA...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTATCTTCTGGGACGCTaGGTCCAAGATGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPYLLGR*VQDGFD
Trigger: GTCAAAGCCATCTTGGACGCAGCGTCCCAGAAGATA...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCGATGTCTGTGAAGGTTaGTATCTTCTGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVDVCEG*YLLGRC
Trigger: GCAGCGTCCCAGAAGATAGCAACCTTCACAGACATC...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGCAGCCCCCTCCTCCTTaGGATCTCCGCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAQPPPP*DLRREL
Trigger: CAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTG...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGACCCCCTCGCAGTTCCTaGTGTATTTCAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGPPRSS*CISAFP
Trigger: AGGAAATGCTGAAATACAGCAGGAACTGCGAGGGGG...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGGAGCTCAGCGCCTCCTaGAGGTCCTCAGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQELSAS*RSSAPS
Trigger: CGAGGGGGCTGAGGACCTGCAGGAGGCGCTGAGCTC...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCAAGGGCGCGCAGCTGTaGGACGAGACGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFKGAQL*DETEAP
Trigger: CGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTT...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGCAAGCACAGTGCACTaGGGCCCTGGAAACCCCGAC +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGASTVH*GPGNPD
Trigger: GTCGGGGTTTCCAGGGCCGCAGTGCACTGTGCTTGC...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTTGCTGTCTGCCGACTaGCAACTTTGCTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSLLSAD*QLCCVL
Trigger: CAAAACACAGCAAAGTTGGCAGTCGGCAGACAGCAA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCATTTAATCTCAGGAGTTaGCGCCTGGACGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: LDELLSTADPGLDSAGRSFNLRS*RLDDVD
Trigger: GTCTACATCGTCCAGGCGCCAACTCCTGAGATTAAA...TGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCACTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPLQACS*LVSTFR
Trigger: TCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAG...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTTTGAGGGACTGGTGCTaGTCGGGGCCGGCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGLRDWC*SGPAGA
Trigger: TGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTCAA...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTCACGGCCAGGCGCTCTaGGTGGGGGCGGTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPHGQAL*VGAVRC
Trigger: GCACCTCACCGCCCCCACCCAGAGCGCCTGGCCGTG...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGCTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 4 (lower is better)
Translates to: STSPEAAPPRSARPLKAPASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGCGTGGGGAGTGGAGTaGAGGTGCGGCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIAWGVE*RCGLRG
Trigger: TCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGCGTGGGGAGTGGAGTaGAGGTGCGGCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHAWGVE*RCGLRG
Trigger: TCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGGGGGCGCGTGGGGAGTaGAGTGGAGGTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMGARGE*SGGAAS
Trigger: GGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGGACGCCACACCTTCCTaGGTTTGCTGGGCAGACCTG +
Preference number: 4 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDEDATPS*VCWADL
Trigger: CAGGTCTGCCCAGCAAACCCAGGAAGGTGTGGCGTC...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR CCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAAGGTTGCTATCTTCTaGGACGCTGCGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHAKVAIF*DAASKM
Trigger: CATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTT...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCAAGGTTGCTATCTTCTaGGACGCTGCGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVKVAIF*DAASKM
Trigger: CATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTT...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATGGCACTTTGGGCGGATaGAGTCTACCGCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNGTLGG*SLPRSA
Trigger: AGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCC...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGCTGGCCTGCCTGCGGTaGAACACCTCCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: EAVKCLYGEGHTRARSCALACLR*NTSSML
Trigger: AAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAG...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGGCCTCGCCGAATGCCTaGGGAGGGGCAGGGCGACTT +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQASPNA*GGAGRL
Trigger: AAGTCGCCCTGCCCCTCCCCAGGCATTCGGCGAGGC...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGCGTGCCTGCGCAGGATaGCCAGGCTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWRACAG*PGFPPP
Trigger: AGGAGGAGGAAAGCCTGGCCATCCTGCGCAGGCACG...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCTTTCTCTGGCATTCCTaGAAAAACGGGCAGTCGGAG +
Preference number: 4 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRFLWHS*KNGQSE
Trigger: CTCCGACTGCCCGTTTTTCCAGGAATGCCAGAGAAA...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGTGTGGCCCCTCTTGTaGTCGGTCCAGACGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIVWPLL*SVQTLN
Trigger: GTTCAGCGTCTGGACCGACCACAAGAGGGGCCACAC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGGAGATGCCTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGGGACAGGCGGATCACGCCGGTCCTaGCATCTGAGGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RRCLILKTSMRTSGSGTGGSRRS*HLRCPC
Trigger: GCACGGGCACCTCAGATGCCAGGACCGGCGTGATCC...GCCTGTCCCTGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAGGCATCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397021.5
3UTR CAA 72 bp TCTTTGTTAATCACGCCTCCTTCGAGAGGTCACCGCTaGCTGTTCTGCGAGACGGCGGTGGGGAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SLLITPPSRGHR*LFCETAVGRDR
Trigger: CCTGTCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGCGTGATTAACAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCTCAGGTGCCTCCAGTaGGTGGGACGTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAILRCLQ*VGRFAP
Trigger: TGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAG...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACATTCCTGGTGAAGAATTaGGGCCAAAGTACCACAAAA +
Preference number: 4 (lower is better)
Translates to: GHTRARSCATRRRHRACTFLVKN*GQSTTK
Trigger: TTTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAA...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCTGGAGGTCTGGCCAGTaGCGGCTACAAGCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIWRSGQ*RLQAAG
Trigger: CCCAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCA...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCTGCTCCAGTTTCTGCTaGTGCTTTGCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: SCATRRRHRACTVHQGHRCSSFC*CFAQNS
Trigger: TGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCA...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGCCTTGTAAATCGCGTTaGGCTCCTGGATCTTATTTT +
Preference number: 4 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQPCKSR*APGSYF
Trigger: AAAATAAGATCCAGGAGCTCAACGCGATTTACAAGG...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCAGTTGTGAAGGCCTGTTaGCAGGAGGTGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEAVVKAC*QEVSHQ
Trigger: CTGATGGCTCACCTCCTGTCAACAGGCCTTCACAAC...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAGTTTTCCAGCTCCCTaGGGAATATCCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHASFPAP*GISCCG
Trigger: TCCACAACAGGATATTCCTCAGGGAGCTGGAAAACT...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGATGGTCTCTAAGCAGTaGCTTGTCACGTCTGATCCG +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRMVSKQ*LVTSDP
Trigger: CGGATCAGACGTGACAAGTCACTGCTTAGAGACCAT...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCCTCTATGAACTGTCCTaGATCCCATTTCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSLYELS*IPFQVI
Trigger: GATGACCTGAAATGGGATTCAGGACAGTTCATAGAG...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCCTAAAGACCTTGCACCAAAACGATaGAGGTTGTGGGCATCGGAG +
Preference number: 4 (lower is better)
Translates to: ARGREVPWGCKEMPHPKDLAPKR*RLWASE
Trigger: CTCCGATGCCCACAACCTTCATCGTTTTGGTGCAAG...GTCTTTAGGATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR TCA 90 bp GCTGAGCGTACTGTCTGTGAGCAGCAGGGGCCGGTAGGGGAGGATTCTCCCATTGAAAATGCCAAGCATTaGCCGCCTGTGCTGCGATGG +
Preference number: 4 (lower is better)
Translates to: AERTVCEQQGPVGEDSPIENAKH*PPVLRW
Trigger: CCATCGCAGCACAGGCGGTCAATGCTTGGCATTTTC...AATGGGAGAATCCTCCCCTACCGGCCCCTGCTGCTCACAGACAGTACGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATGCTTCTCTACAAGCCTaGAGCTGGCTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNASLQA*SWLVST
Trigger: AGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGC...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTGCTCCAGCGCCCGGTaGTGGCTGGCTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLCSSAR*WLASLQ
Trigger: TTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCA...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTTGCTCCAGCGCCCGGTaGTGGCTGGCTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGCSSAR*WLASLQ
Trigger: TTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCA...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGTCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRSDELI*SSALDQ
Trigger: CTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGA...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCATCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEASDELI*SSALDQ
Trigger: CTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGA...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTCCCGCCGTCCTCCTCTaGGTCGGACGAGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGPAVLL*VGRVNL
Trigger: CAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGG...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTCCCTCGTCGCCCTCCTaGACCAGCTCCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSPSSPS*TSSTTS
Trigger: GGACGTGGTGGAGCTGGTGCAGGAGGGCGACGAGGG...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGGCTCGACTCTGAGCTaGTCAGGCACTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIGSTLS*SGTGPS
Trigger: GCTCGGCCCAGTGCCTGAGCAGCTCAGAGTCGAGCC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCG +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHCSWTS*SARPTP
Trigger: CGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCA...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGAGGCCGCGCTACCCCTaGAGGTCGGAGAAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLRPRYP*RSEKGA
Trigger: GGCCCCCTTCTCCGACCTGCAGGGGTAGCGCGGCCT...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTGGAGTGGAGTGGAGGTaGGGCCTCCGAGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSGVEWR*GLRGGC
Trigger: GCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCC...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGTGGGCCAGGAGCCTCTaGACGGTGGCCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKWARSL*TVAWLS
Trigger: TGACAACCAGGCCACCGTGCAGAGGCTCCTGGCCCA...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGATTTCTGCTGATGCTTTaGCCAGAACTCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGFLLML*PELIEG
Trigger: GCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAA...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGAGCAGGTGCTCCACATaGGCCAGGCTGTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLSRCST*ARLLPM
Trigger: CATCGGCAACAGCCTGGCGCATGTGGAGCACCTGCT...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGAGGTCCCTCAGCAGGTaGTCCACATGCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKRSLSR*STCARL
Trigger: CAGCCTGGCGCATGTGGAGCACCTGCTGAGGGACCT...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGGGGGCAGGGCGACTTTaGCAGTGCCTCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLRLAKPCRVKRFLESAEGAGRL*QCLGSG
Trigger: CCCAGACCCGAGGCACTGGCAAAGTCGCCCTGCCCC...CTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGCTGAGCCGCGGCCCTaGCGGCTCTCACTCATCTCA +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHAEPRP*RLSLIS
Trigger: TGAGATGAGTGAGAGCCGGCAGGGCCGCGGCTCAGC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTACGCTGAACGAGCCCTaGATCAGCAGCTTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGTLNEP*ISSLPR
Trigger: CCTGGGCAAGCTGCTGATGCAGGGCTCGTTCAGCGT...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAGCAAGCACAGTGCACTaGGGCCCTGGAAACCCCGAC +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEASTVH*GPGNPD
Trigger: GTCGGGGTTTCCAGGGCCGCAGTGCACTGTGCTTGC...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGCATGTGCAAGCACAGTaGACTGCGGCCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDEHVQAQ*TAALET
Trigger: GGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATG...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACACACGCACAACCTTGTTaGTATTTTGTCATCATCGCC +
Preference number: 4 (lower is better)
Translates to: HKGAQLCDETEAPRLHSTHAQPC*YFVIIA
Trigger: GGCGATGATGACAAAATAGCAACAAGGTTGTGCGTG...TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGTTCCTCTGCTGCCTTTaGGTTTCTGACACGCACAAC +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRFLCCL*VSDTHN
Trigger: GTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAA...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGGTCAACATTGCTGTCTaGCGACTGCCAACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRVNIAV*RLPTLL
Trigger: CAGCAAAGTTGGCAGTCGGCAGACAGCAATGTTGAC...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCACATGACAGTCAACATTaGTGTCTGCCGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: CPALLRPLARGSSTSPEAHDSQH*CLPTAN
Trigger: GTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATG...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGCCTCCCGTGGCTCTGTaGACGCTGTCCAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAPPVAL*TLSSSR
Trigger: TCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGG...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCAAACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCAGGATGTACTCACACTaGCGAGTGCCTCCCGAGACT +
Preference number: 4 (lower is better)
Translates to: PKPLQTAPWDQRLSLASTRMYSH*RVPPET
Trigger: AGTCTCGGGAGGCACTCGGCAGTGTGAGTACATCCT...GGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp CCCAAACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCCCTGACGAAGACGTTTaGACAGGACGCTGGGGTGAA +
Preference number: 4 (lower is better)
Translates to: PKPLQTAPWDQRLSLASTPDEDV*TGRWGE
Trigger: TTCACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGG...GGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGTGCTCCACACAGGTCTaGATCCGGCCACTGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSCSTQV*IRPLSQ
Trigger: CTGGGACAGTGGCCGGATGCAGACCTGTGTGGAGCA...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGCGCCCGGTGCTGGCTaGCTTCTCTACAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFAPGAG*LLYKPA
Trigger: TGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCGCCCGGTGCTGGCTaGCTTCTCTACAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGAPGAG*LLYKPA
Trigger: TGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGC...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCTCCAGCGCCCGGTGCTaGCTGGCTTCTCTACAAGCC +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFSSARC*LASLQA
Trigger: GGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGA...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCTGGAACCAGCTTCTTaGGGCCCAACCCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFLEPAS*GPTRRP
Trigger: AGGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAG...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTAT +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKGPPFS*SATTVY
Trigger: ATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCC...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATCGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHRPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCATCGGAGAAGGGGGCCTaGCCGCCCTCGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSSEKGA*PPSLQL
Trigger: CAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTGGCCGGGGTCTTCCGTaGAACCTGCCTCTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVGRGLP*NLPLPR
Trigger: CCGGGGCAGAGGCAGGTTCCACGGAAGACCCCGGCC...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSNCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACAATAAAGGAATCTCCTTaGCTTCTAACTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTIKESP*LLTAFG
Trigger: ACCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTAT...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGTATGGTCGGCAGCACTaGTCCACGCCACACCCTGCA +
Preference number: 4 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWYGRQH*STPHPA
Trigger: TGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATA...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGGGGCTCTCTGAGCTATaGTCGGCAGCACTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLGLSEL*SAALVH
Trigger: GTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCC...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGGGTCCTGGTTCACACTaGGCTCTGAGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVGPGSH*ALSPQP
Trigger: AGGCTGAGGGCTCAGAGCCCAGTGTGAACCAGGACC...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCAGGTGCCGGAGCTCCTaGCACTTTGGGCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFRCRSS*HFGRME
Trigger: CTCCATCCGCCCAAAGTGCCAGGAGCTCCGGCACCT...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGGCGCCGTCCTGGGACTaGCACTTGTCCACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVAPSWD*HLSTGC
Trigger: ACAACCTGTGGACAAGTGCCAGTCCCAGGACGGCGC...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGGCCTCCGCGCCGTCCTaGGACTGGCACTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQASAPS*DWHLST
Trigger: TGTGGACAAGTGCCAGTCCCAGGACGGCGCGGAGGC...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTCTTCCAACCAGTTCTaGGCAGTCAGTGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPSSNQF*AVSVVF
Trigger: GAAAACTACACTGACTGCCCAGAACTGGTTGGAAGA...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAGACACCAATCTGAGCTaGCCGTGGCTGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEDTNLS*PWLLPP
Trigger: GGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTGTC...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTGCGAGACGGCGGTGGGGAGGGACTCATTGGGCCGTTGTaGGGAAGAATAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: ASFERSPLAVLRDGGGEGLIGPL*GRITVA
Trigger: AGCAACAGTTATTCTTCCCCACAACGGCCCAATGAG...TCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTCTGCAGACAGCCCCTTaGGATCAACGCCTTAGCCTG +
Preference number: 4 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGLQTAP*DQRLSL
Trigger: CAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAG...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTGTTTGCACAGGACGCTaGGGTGAATGCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGVCTGR*GECSGL
Trigger: CAGGCCTGAGCATTCACCCCAGCGTCCTGTGCAAAC...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTGCACTCCATCCAGCTTaGGCAACAGAGCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTALHPA*ATEQDS
Trigger: AGAGTCCTGCTCTGTTGCCCAAGCTGGATGGAGTGC...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp TCGAGGCTGGACCTGGATGCGCCTAGCAGGGCGTCACCTATGTGGCCAACCTCGTCCGGACTGGAGCTGTaGACTAGGAATCATCACACT +
Preference number: 4 (lower is better)
Translates to: SRLDLDAPSRASPMWPTSSGLEL*TRNHHT
Trigger: AGTGTGATGATTCCTAGTCCACAGCTCCAGTCCGGA...CGAGGTTGGCCACATAGGTGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp TCGAGGCTGGACCTGGATGCGCCTAGCAGGGCGTCACCTATGTGGCCAACCTCGTGCAGTGAACTATGGTaGATGGAGCTGCAGTGGATG +
Preference number: 4 (lower is better)
Translates to: SRLDLDAPSRASPMWPTSCSELW*MELQWM
Trigger: CATCCACTGCAGCTCCATCCACCATAGTTCACTGCA...CGAGGTTGGCCACATAGGTGACGCCCTGCTAGGCGCATCCAGGTCCAGCCTCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGGTCCGCGCGTCCCCTaGAAGCACCGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLGPRVP*KHRPEA
Trigger: TGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTTCCTGGTGAAGAATTaGGGCCAAAGTACCACAAAA +
Preference number: 4 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSFLVKN*GQSTTK
Trigger: TTTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGCCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLPSASP*GRNFRW
Trigger: CCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGG...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGCTCCACGGCCACGCCTaGTTTCTCCTCGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQLHGHA*FLLEAG
Trigger: GCCAGCTTCGAGGAGAAATCAGGCGTGGCCGTGGAG...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCCCTTGTAAATCGCGTTaGGCTCCTGGATCTTATTTT +
Preference number: 4 (lower is better)
Translates to: AGAGLSELWSAALVHATPPCKSR*APGSYF
Trigger: AAAATAAGATCCAGGAGCTCAACGCGATTTACAAGG...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCGGTCGGTCCAGACGCTaGACGAGCCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFGRSRR*TSPASA
Trigger: TGCTGATGCAGGGCTCGTTCAGCGTCTGGACCGACC...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTCGGTTGCTCGGTGCCTaGGCCGCACGCTGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTRLLGA*AARWAL
Trigger: CAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCG...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGGTGTCGGCTGCATTGTaGTTCTGTAATGGTTCCACT +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRVSAAL*FCNGST
Trigger: AGTGGAACCATTACAGAATCACAATGCAGCCGACAC...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGACTGCCCGCATCCCGTaGGTTAGAAACAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CLYGEGHTRARSCATRRRTARIP*VRNKLL
Trigger: TAAAAGCTTGTTTCTAACTCACGGGATGCGGGCAGT...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTGCCTCCGGTGTGTCTTaGACAAGCCTGATGACGTCA +
Preference number: 4 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGASGVS*TSLMTS
Trigger: TGACGTCATCAGGCTTGTTCAAGACACACCGGAGGC...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR TCA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTTCCTCCAAATGCCACTaGGCACTACCTGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTSSKCH*ALPASK
Trigger: CTTGGATGCAGGTAGTGCTCAGTGGCATTTGGAGGA...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR TCA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTAGCTACTTGGGAGGCTaGGGCAGGAGAATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGSYLGG*GRRIAG
Trigger: TCCAGCTATTCTCCTGCCTCAGCCTCCCAAGTAGCT...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR TCA 90 bp TGCCTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGGGACAGGCTTGCACTGGTGTGTGCCAGGTTaGGTCAGGGTCAGGAACGGG +
Preference number: 4 (lower is better)
Translates to: CLILKTSMRTSGSGTGLHWCVPG*VRVRNG
Trigger: CCCGTTCCTGACCCTGACTCAACCTGGCACACACCA...GTGCAAGCCTGTCCCTGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR TCA 90 bp CAGGGCGGTAGCCTGGCTGGATTCTGGATCTGTTCTGGAGGCACAGCCAACAGGACAGCTGACTGCTGCTaGCTGATGAGCACACATGTG +
Preference number: 4 (lower is better)
Translates to: QGGSLAGFWICSGGTANRTADCC*LMSTHV
Trigger: CACATGTGTGCTCATCAGTCAGCAGCAGTCAGCTGT...CCTGTTGGCTGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCTACCGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp GAAAGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ESAELSEAELVTVSSMKEGRLCD*SSARCW
Trigger: CCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCC...TTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVGRLCD*SSARCW
Trigger: CCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCC...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAAGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAACTCTTGAGGGACTGGTaGTGGTCGGGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ESAELSEAELVTVSSMKELLRDW*WSGPAG
Trigger: CCCTGCCGGCCCCGACCAGCACCAGTCCCTCAAGAG...TTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGCCCTCGTCGCCCTCCTaGACCAGCTCCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLPSSPS*TSSTTS
Trigger: GGACGTGGTGGAGCTGGTGCAGGAGGGCGACGAGGG...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTGCCGGACGGACAGGCTaGTGGCCGGCACCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTAGRTG*WPAPSP
Trigger: AGGGCTGGGTGCCGGCCAGCAGCCTGTCCGTCCGGC...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTAGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGACACCCTGCAGAAACTaGATCTTTGTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: GARGEWSGGAASEEAAVQTPCRN*IFVFSL
Trigger: TAAAGAAAATACAAAGATGCAGTTTCTGCAGGGTGT...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCAGTCCACGCCACACCCTaGAGAAACTGCATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SLPWLCARCPVLESRLPAVHATP*RNCIFV
Trigger: TACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGAC...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGAGAAAGAAACTATGCAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCGTGCCCCTCTTTCAGTaGCAGCCTCAAATCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RERNYAEGIATRCGGGSGVPLFQ*QPQILL
Trigger: AAGGAGGATTTGAGGCTGGCACTGAAAGAGGGGCAC...GCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGCATAGTTTCTTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGTGGGCCAGGAGCCTCTaGACGGTGGCCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQWARSL*TVAWLS
Trigger: TGACAACCAGGCCACCGTGCAGAGGCTCCTGGCCCA...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCAGCCCCCTCCTCCTTaGGATCTCCGCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFQPPPP*DLRREL
Trigger: CAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTG...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTAGTCTCCAGGCGGCGGTaGAGCTCCAGGGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLVSRRR*SSRDLL
Trigger: CAGCAAGTCCCTGGAGCTGCACCGCCGCCTGGAGAC...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCAGGAACACCTCCTCCATaGTTGCCTGCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEAGTPPP*LPASGR
Trigger: TCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCC...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTGAGGGGCGACTTTGCCAGTaGCTCGGGTCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LAKPCRVKRFLESAELSEGRLCQ*LGSGGH
Trigger: GTGGCCCCCAGACCCGAGGCACTGGCAAAGTCGCCC...CTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGGGCGACTTTGCCAGTaGCTCGGGTCTGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLGRLCQ*LGSGGH
Trigger: GTGGCCCCCAGACCCGAGGCACTGGCAAAGTCGCCC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCAGGCACTACTTTTACCTTTCTGACCTTTGAGGTTAGCAAAACCCTGCAGGGTCAGAGCCTCGCCGAATaGCTGGGGAGGGGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AGTTFTFLTFEVSKTLQGQSLAE*LGRGRA
Trigger: CGCCCTGCCCCTCCCCAGGCATTCGGCGAGGCTCTG...ACCCTGCAGGGTTTTGCTAACCTCAAAGGTCAGAAAGGTAAAAGTAGTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGGCTGAGCCGCGGCCCTaGCGGCTCTCACTCATCTCA +
Preference number: 4 (lower is better)
Translates to: PLRLAKPCRVKRFLESAEAEPRP*RLSLIS
Trigger: TGAGATGAGTGAGAGCCGGCAGGGCCGCGGCTCAGC...CTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGAGCTCAGCGCCTCCTaGAGGTCCTCAGCCCCCTCG +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPELSAS*RSSAPS
Trigger: CGAGGGGGCTGAGGACCTGCAGGAGGCGCTGAGCTC...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTAAAGCGGTTGCTCGGTaGCTGAGCCGCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSKAVAR*LSRTLG
Trigger: GCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTT...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGAGAAAGCAAAGCGGTTaGTCGGTGCCTGAGCCGCAC +
Preference number: 4 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVRKQSG*SVPEPH
Trigger: GTGCGGCTCAGGCACCGAGCAACCGCTTTGCTTTCT...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCACATGACAGTCAACATTaGTGTCTGCCGACTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SLPWLCARCPVLESRLPAHDSQH*CLPTAN
Trigger: GTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATG...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCAAATATTTTGTTTGTaGTCCATGTGTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCQIFCL*SMCAGK
Trigger: TTTTCCAGCACACATGGAGCACAAACAAAATATTTG...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp AGTGGGCCAAAAAGTCCAAAGCCTCTACAGTTTGGAGACATCACAGCTGACTGCGCACAGACCGGCCTCTaGGGACCAGGGATGCCCTCC +
Preference number: 4 (lower is better)
Translates to: SGPKSPKPLQFGDITADCAQTGL*GPGMPS
Trigger: GGAGGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGC...GCAGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTGGACTTTTTGGCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp TGCCTGCGCCCAGGCTTTGCGGCACAGACCGGCCTCTGCGGACCAGGGATGCCCAGACGCTTCCAGCATTaGTCGATTTTAACAATGAAT +
Preference number: 4 (lower is better)
Translates to: CLRPGFAAQTGLCGPGMPRRFQH*SILTMN
Trigger: ATTCATTGTTAAAATCGAGCAATGCTGGAAGCGTCT...GGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATGGGACGATGTCCTGGTaGATGATTTCATCCGTGTGC +
Preference number: 4 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNGTMSW*MISSVC
Trigger: GCACACGGATGAAATCATGCACCAGGACATCGTCCC...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS-3UTR CCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGCTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLLQACS*LVSTFR
Trigger: TCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAG...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTGAGGCAGAGGCGCCCGGTGCTGGCTaGCTTCTCTACAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: KPCRVKRFLESAELSEAEAPGAG*LLYKPA
Trigger: TGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGC...CTCTGCCTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGTTCCTCTTGAGGGACTaGTGCTGGTCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQFLLRD*CWSGPA
Trigger: TGCCGGCCCCGACCAGCACCAGTCCCTCAAGAGGAA...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCTGGAACCAGCTTCTTaGGGCCCAACCCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFILEPAS*GPTRRP
Trigger: AGGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAG...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTCGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSRPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGGCAGAAGCAGCACGGTaGAGCCAGGACGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQAEAAR*SQDEMP
Trigger: CGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGC...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGGGCTCTCTGAGCTATaGTCGGCAGCACTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGGLSEL*SAALVH
Trigger: GTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCC...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGCGTGGGGAGTGGAGTaGAGGTGCGGCCTCCGAGGA +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLAWGVE*RCGLRG
Trigger: TCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCAAGGTGGTCACCAGGTaGCAGGTGGACCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIKVVTR*QVDLGG
Trigger: CCCACCCAGGTCCACCTGCCACCTGGTGACCACCTT...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATACGGCTACAAGCCGCTaGGAGGGTAGCGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHTATSR*EGSVRG
Trigger: TCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGT...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCCGCACCCTGGAGGTCTaGCCAGTGACGGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFRTLEV*PVTATS
Trigger: GCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCG...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGCACCAGCACCATCTTaGCCGCGAAGCGGGGACGCC +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLAPAPS*PRSGDA
Trigger: GGCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR CCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGCGGGCACACAAAGGATaGCGCAGCACCAGCACCATC +
Preference number: 4 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQRAHKG*RSTSTI
Trigger: GATGGTGCTGGTGCTGCGCCATCCTTTGTGTGCCCG...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR CCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTTCGATGGCCGTGCGCTaGCACAGCCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVSMAVR*HSHREW
Trigger: CCACTCCCGGTGGCTGTGCCAGCGCACGGCCATCGA...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGCCTGGTTGTCAAGCTaGTCCTGGTTCACACTGGGC +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGAWLSS*SWFTLG
Trigger: GCCCAGTGTGAACCAGGACCAGCTTGACAACCAGGC...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAGCGCCGTCCTGGGACTaGCACTTGTCCACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEAPSWD*HLSTGC
Trigger: ACAACCTGTGGACAAGTGCCAGTCCCAGGACGGCGC...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGAATCGCGTTGAGCTCCTaGATCTTATTTTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: RGCSLPWLCARCPVLESRIALSS*ILFSAP
Trigger: CGGTGCGGAAAATAAGATCCAGGAGCTCAACGCGAT...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGGAGGTGAGCCATCAGTaGGTTATCCATCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLEVSHQ*VIHLRG
Trigger: GCCGCGGAGATGGATAACCCACTGATGGCTCACCTC...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGTGCTCCATGTGTGCTaGAAAATAACGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: DPVPRSPQAVGQRILHFSVLHVC*KITQIS
Trigger: AGAAATCTGCGTTATTTTCCAGCACACATGGAGCAC...GGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTAGGCTGCTCCCTCCCGTaGCTCTGTGCACGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLGCSLP*LCARCP
Trigger: TGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCC...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CAGGGCGGTAGCCTGGCTGGATTCTGGATCTGTTCTGGAGGCACAGCCAACAGGCCGTTTCCTCCTTTTTaGCCTCATTGGGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: QGGSLAGFWICSGGTANRPFPPF*PHWAVV
Trigger: CACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGG...CCTGTTGGCTGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCTACCGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTTGGGCTCGGGGCACGTaGGCCTTACCTGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSWARGT*ALPELL
Trigger: GAGCAGCTCAGGTAAGGCCCACGTGCCCCGAGCCCA...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CCA 90 bp GGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCCTAAAGACTTCGATAGGATTCACTCGTGGTaGCATGGCTACGGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GREVPWGCKEMPHPKDFDRIHSW*HGYGAG
Trigger: CCCAGCACCGTAGCCATGCCACCACGAGTGAATCCT...ATCGAAGTCTTTAGGATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR TCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGATCAGTGGCGCTGAGCTaGCGTATCCCTCCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGSVALS*RIPPGL
Trigger: TAAGCCTGGAGGGATACGTCAGCTCAGCGCCACTGA...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGCTTTGTCAGTGGCGCTaGGCTGACGTATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQLCQWR*ADVSLQ
Trigger: CTGGAGGGATACGTCAGCTCAGCGCCACTGACAAAG...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCTTTGTCAGTGGCGCTaGGCTGACGTATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFLCQWR*ADVSLQ
Trigger: CTGGAGGGATACGTCAGCTCAGCGCCACTGACAAAG...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGGGTGGAGACACCACCTaGTGTCACCCACGGACACGT +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQGGDTT*CHPRTR
Trigger: ACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACC...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGTTGTGAAGGCCTGTTaGCAGGAGGTGAGCCATCAG +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGVVKAC*QEVSHQ
Trigger: CTGATGGCTCACCTCCTGTCAACAGGCCTTCACAAC...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGCTACTTTTACCTTTCTaGCCTTTGAGGTTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQLLLPF*PLRLAK
Trigger: TTTTGCTAACCTCAAAGGTCAGAAAGGTAAAAGTAG...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCATTTCCGTCCCAACAATaGCTTACCATGTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPFPSQQ*LTMCKH
Trigger: GTGCTTGCACATGGTAAGTCATTGTTGGGACGGAAA...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGAGCCCCCTTTACTCTATaGACTGTCCTGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: RGCSLPWLCARCPVLESRAPFTL*TVLNPI
Trigger: AATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGC...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGCACGTGGGCCTTACCTaGGCTGCTCAGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMHVGLT*AAQALG
Trigger: GCCCAGTGCCTGAGCAGCTCAGGTAAGGCCCACGTG...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGCTTGCAGAAGAGCACTaGCTTCTCGTGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDELAEEH*LLVQEQ
Trigger: CTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAG...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGCTCGACTCTGAGCTaGTCAGGCACTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPGSTLS*SGTGPS
Trigger: GCTCGGCCCAGTGCCTGAGCAGCTCAGAGTCGAGCC...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000535094.7
CDS-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGCCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLPGRPR*SWTSCS
Trigger: TGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGTCTTCCGTGGAACCTaGCTCTGCCCCGGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPVFRGT*LCPGGV
Trigger: GACCCCTCCGGGGCAGAGGCAGGTTCCACGGAAGAC...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PNNLHIRGKAAESLHASYGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGGCTAAAGAGACCCCGTaGCCCGCTCTCCTCAGGCCG +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMAKETP*PALLRP
Trigger: CGGCCTGAGGAGAGCGGGGCACGGGGTCTCTTTAGC...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGGGAGCTTCAGGGAGTaGCATCCGTTTCCATGGGAG +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFGSFRE*HPFPWE
Trigger: CTCCCATGGAAACGGATGGCACTCCCTGAAGCTCCC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACACCCTGCAGAAACTaGATCTTTGTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPTPCRN*IFVFSL
Trigger: TAAAGAAAATACAAAGATGCAGTTTCTGCAGGGTGT...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR GCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCAGTCCACGCCACACCCTaGAGAAACTGCATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEAVHATP*RNCIFV
Trigger: TACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGAC...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGGAAAGATGCTGCGATaGGCAGGACGGACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFGKMLR*AGRTPS
Trigger: TGAAGGCGTCCGTCCTGCGCATCGCAGCATCTTTCC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTAACTTTCGATGGCCGTaGGCTGGCACAGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSNFRWP*AGTATG
Trigger: CCCGGTGGCTGTGCCAGCGCACGGCCATCGAAAGTT...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTGAGGCAGAGAGGAACAGGTGCCGCTaGATGGGCTTGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: KPCRVKRFLESAELSEAERNRCR*MGLNLA
Trigger: GGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCT...CTCTGCCTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGCTGGGCCCTGCCCACTaGCGGCTTCTTTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMLGPAH*RLLFRP
Trigger: GGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCAG...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTTCAGGTCATCGATACTaGTACACCAGCTTTCTTATG +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSSGHRY*YTSFLM
Trigger: CATAAGAAAGCTGGTGTAGCAGTATCGATGACCTGA...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCGCCGACTGCCAACTTTaGTGTGTTTTGAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHAADCQL*CVLSFI
Trigger: TATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGC...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTGCCGACTGCCAACTTTaGTGTGTTTTGAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: ETPCPALLRPLARGSSTSADCQL*CVLSFI
Trigger: TATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGC...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGACCTCCCGTGGCTCTGTaGACGCTGTCCAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGPPVAL*TLSSSR
Trigger: TCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGG...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGCCTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGGGACAGGCTTGCACTCCTGGCATCTGAGGTaGCCGTGCTGGTCCACGTTA +
Preference number: 4 (lower is better)
Translates to: CLILKTSMRTSGSGTGLHSWHLR*PCWSTL
Trigger: TAACGTGGACCAGCACGGGCACCTCAGATGCCAGGA...GTGCAAGCCTGTCCCTGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR GCA 90 bp CGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTTGCACCATTATCCTTTaGTCTCGGGGGCGGCCTGTA +
Preference number: 4 (lower is better)
Translates to: RGTAHATASTQFAILALCCTIIL*SRGRPV
Trigger: TACAGGCCGCCCCCGAGAGCAAAGGATAATGGTGCA...ACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGGGTGCCTCCAGTGAGTaGGACGTTTTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVGASSE*DVLLQP
Trigger: AGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACC...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTCTGGAACCAGCTTCTTaGGGCCCAACCCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSLEPAS*GPTRRP
Trigger: AGGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAG...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGCGCCCTCGCTGCAGCTaGACGAGTTGCTCAGCACGG +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMRPRCS*TSCSAR
Trigger: CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTCCTCTGTGGGCTCTaGAGTCTCCGGGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKLLCGL*SLRGSP
Trigger: GGGGCTTCCCCGGAGACTCCAGAGCCCACAGAGGAG...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCTCTCCTCAGGCCGTTaGCCAGAGGATCCTCCACTT +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKLSSGR*PEDPPL
Trigger: AAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAG...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCATCTAACTGCTTTTGGTaGTGGAGACACCACCTGATG +
Preference number: 4 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPSNCFW*WRHHLM
Trigger: CATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGA...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTGGGGCGCGTGGGGAGTaGAGTGGAGGTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPGARGE*SGGAAS
Trigger: GGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATGGGGCGCGTGGGGAGTaGAGTGGAGGTGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PNNLHIRGKAAESLHASYGARGE*SGGAAS
Trigger: GGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTTCGATGGCCGTGCGCTaGCACAGCCACCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LFRSRRRGCRANCHQKASSMAVR*HSHREW
Trigger: CCACTCCCGGTGGCTGTGCCAGCGCACGGCCATCGA...AGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGTCGACTGGACGTCATTaGGCAGCTCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLSTGRH*AALFQP
Trigger: TGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGA...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGAGCTCCTGGCACTTTaGGCGGATGGAGTCTACCGC +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIELLAL*ADGVYR
Trigger: GCGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAATCTCCGCAGAGAACTaGTCACAGAGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGISAEN*SQRCRS
Trigger: GCTCCGGCACCTCTGTGACCAGTTCTCTGCGGAGAT...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTTCAGGATGCCCAGGATaGAGCTCAGCGCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGSGCPG*SSAPPA
Trigger: TGCAGGAGGCGCTGAGCTCCATCCTGGGCATCCTGA...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCGTGTGGCCCCTCTTGTaGTCGGTCCAGACGCTGAAC +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFVWPLL*SVQTLN
Trigger: GTTCAGCGTCTGGACCGACCACAAGAGGGGCCACAC...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAACCAGCTCCTTCACCTTaGTGTGGCCCCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEPAPSP*CGPSCG
Trigger: ACCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGG...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACAACACCAGCTTTCTTATaGTGTTTGTCTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HKGAQLCDETEAPRLHSTTPAFL*CLSVLS
Trigger: AGACAGAACAGACAAACACCATAAGAAAGCTGGTGT...TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCGTGCTCCATGTGTGCTaGAAAATAACGCAGATTTCT +
Preference number: 4 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSVLHVC*KITQIS
Trigger: AGAAATCTGCGTTATTTTCCAGCACACATGGAGCAC...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCAAACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCCCTTTTTGGCCTCATTaGGCCGTTGTGGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: PKPLQTAPWDQRLSLASTPFWPH*AVVGKN
Trigger: ATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGG...GGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp GAGTTTAAGGAGTGTGAGAGTGTAGACACAGCAGGCCTGGATTCCCAGCAGACCGGACAACCTCGAGGCTaGACCTGGATGCGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: EFKECESVDTAGLDSQQTGQPRG*TWMRLA
Trigger: TGCTAGGCGCATCCAGGTCCAGCCTCGAGGTTGTCC...GGTCTGCTGGGAATCCAGGCCTGCTGTGTCTACACTCTCACACTCCTTAAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 72 bp AGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTaGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGC +
Preference number: 4 (lower is better)
Translates to: RGKAAESLHASY*IPHPGGLASDG
Trigger: GCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTGCATGCTTCCTATTTaGTTCCGCACCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLCMLPI*FRTLEV
Trigger: GACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCA...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCAGTGCTTGTTCCCAATaGGCTGCTCGCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFSACSQ*AARRPE
Trigger: CTCTGGACGGCGAGCAGCTCATTGGGAACAAGCACT...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGACCTGTTGACAGGAGGTaGGCCATCAGTGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGPVDRR*AISGLS
Trigger: GGATAACCCACTGATGGCTCACCTCCTGTCAACAGG...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTGGTCGGTCCAGACGCTaGACGAGCCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: FEVSKTLQGKALSGKRRAGRSRR*TSPASA
Trigger: TGCTGATGCAGGGCTCGTTCAGCGTCTGGACCGACC...AGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGGTCGGTCCAGACGCTaGACGAGCCCTGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLGRSRR*TSPASA
Trigger: TGCTGATGCAGGGCTCGTTCAGCGTCTGGACCGACC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCAAGCGCAGAGCTTTCTaGGGCAGAGCTAGTGACCGT +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFKRRAF*GRASDR
Trigger: ACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTT...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453297.5
CDS-3UTR TCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGCTGCCTTTGCGTTTCTaGCACGCACAACCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWLPLRF*HAQPCC
Trigger: GCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAG...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAAACTGGAATAAGACCTTaGAACAGCACGACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRKTDGDSWGTSQVRESETGIRP*NSTTGH
Trigger: GTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGT...TTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp AGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAGAGTGCTCCAGCGCCCGGTaGTGGCTGGCTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: SAELSEAELVTVSSMKEECSSAR*WLASLQ
Trigger: TTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCA...CTCTTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCCCTCGTCGCCCTCCTaGACCAGCTCCACCACGTCC +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCPSSPS*TSSTTS
Trigger: GGACGTGGTGGAGCTGGTGCAGGAGGGCGACGAGGG...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGTCCACGCCACACCCTaGAGAAACTGCATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIVHATP*RNCIFV
Trigger: TACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGAC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGAACTTTCGATGGCCGTaGGCTGGCACAGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKNFRWP*AGTATG
Trigger: CCCGGTGGCTGTGCCAGCGCACGGCCATCGAAAGTT...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGAAGCCCTGCTCAAAGTaGCGGAGCTGCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: VKRFLESAELSEAELVTVKPCSK*RSCRHC
Trigger: GCAGTGTCTGCAGCTCCGGCACTTTGAGCAGGGCTT...CACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCAAGCCCTGCTCAAAGTaGCGGAGCTGCAGACACTGC +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIKPCSK*RSCRHC
Trigger: GCAGTGTCTGCAGCTCCGGCACTTTGAGCAGGGCTT...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAAGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAAGGTCCCTCAGCAGGTaGTCCACATGCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ESAELSEAELVTVSSMKERSLSR*STCARL
Trigger: CAGCCTGGCGCATGTGGAGCACCTGCTGAGGGACCT...TTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGTCCTCCATGCTTGCCTaGTTCTGGAAGACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVSSMLA*FWKTFR
Trigger: GCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGA...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTAAGGGCGCGCAGCTGTaGGACGAGACGGAGGCACCG +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTKGAQL*DETEAP
Trigger: CGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTT...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCTTTGTGCTCCATGTGTaGTGGAAAATAACGCAGATT +
Preference number: 4 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVFVLHV*WKITQI
Trigger: AATCTGCGTTATTTTCCAGCACACATGGAGCACAAA...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCTTTGTGCTCCATGTGTaGTGGAAAATAACGCAGATT +
Preference number: 4 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSFVLHV*WKITQI
Trigger: AATCTGCGTTATTTTCCAGCACACATGGAGCACAAA...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGGGGTGCAAGGAGATGCCTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGCCATAGGTGGTGTGTaGCAGGTTGAGTCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: GGARRCLILKTSMRTSGSAIGGV*QVESGS
Trigger: TGACCCTGACTCAACCTGGCACACACCACCTATGGC...TGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAGGCATCTCCTTGCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGGACCGTGTATTTACCTaGAACCAGCTTCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLDRVFT*NQLLGA
Trigger: GGCCCCAAGAAGCTGGTTCCAGGTAAATACACGGTC...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTAT +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMGPPFS*SATTVY
Trigger: ATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCC...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGGCGGCCCCTCCTCTGTaGGCTCTGGAGTCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKAAAPPL*ALESPG
Trigger: CCCCGGAGACTCCAGAGCCCACAGAGGAGGGGCCGC...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGTCGACTGGACGTCATTaGGCAGCTCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWSTGRH*AALFQP
Trigger: TGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGA...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTGAGGCAGAGGCCTGGTTGTCAAGCTaGTCCTGGTTCACACTGGGC +
Preference number: 4 (lower is better)
Translates to: KPCRVKRFLESAELSEAEAWLSS*SWFTLG
Trigger: GCCCAGTGTGAACCAGGACCAGCTTGACAACCAGGC...CTCTGCCTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTCGGGCCGCGTCTGCCTaGCCGCCAGCTTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPRAASA*PPASSG
Trigger: GCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCG...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTCGTGCCTGCGCAGGATaGCCAGGCTTTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FEVSKTLQGKALSGKRRARACAG*PGFPPP
Trigger: AGGAGGAGGAAAGCCTGGCCATCCTGCGCAGGCACG...AGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp AGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAGAGGTGTGGCCCCTCTTGTaGTCGGTCCAGACGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SAELSEAELVTVSSMKEEVWPLL*SVQTLN
Trigger: GTTCAGCGTCTGGACCGACCACAAGAGGGGCCACAC...CTCTTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATTCCTTCACCTTGGTGTaGCCCCTCTTGTGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHSFTLV*PLLWSV
Trigger: GACCGACCACAAGAGGGGCCACACCAAGGTGAAGGA...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTTTTGCTGGGCAGACCTaGCCTCTGCAGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPFAGQT*PLQGSQ
Trigger: CTGGCTGCCCTGCAGAGGCCAGGTCTGCCCAGCAAA...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR CCA 90 bp GTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCGGGAACACCAGCTTTCTTATaGTGTTTGTCTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VRRDGGTAPAQYIRDIAGTPAFL*CLSVLS
Trigger: AGACAGAACAGACAAACACCATAAGAAAGCTGGTGT...TCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGGACACCAATCTGAGCTaGCCGTGGCTGCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMDTNLS*PWLLPP
Trigger: GGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTGTC...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CAA 72 bp CGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTaGTTAATCACGCCTCCTTCGAGAGGTCACCGCTTG +
Preference number: 4 (lower is better)
Translates to: RHGLHTVCHFGS*LITPPSRGHRL
Trigger: CAAGCGGTGACCTCTCGAAGGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 72 bp CTCGAGGAACAGCCCACGCCACGGCCTCCACACAGTTaGCCATTTTGGCTCTTTGTTAATCACGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LEEQPTPRPPHS*PFWLFVNHASF
Trigger: GAAGGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp TTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTC +
Preference number: 4 (lower is better)
Translates to: FRSRRRGCRANCHQKASQVRTQH*ACRLDV
Trigger: GACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCAC...TTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR TCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTGTTGCCGATGTCTGTaGAGGTTGCTATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLCCRCL*RLLSSG
Trigger: CCCAGAAGATAGCAACCTTCACAGACATCGGCAACA...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGAGTGCTTGTTCCCAATaGGCTGCTCGCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PLRLAKPCRVKRFLESAESACSQ*AARRPE
Trigger: CTCTGGACGGCGAGCAGCTCATTGGGAACAAGCACT...CTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp AAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTGAGGCAGAGAAGCGCAGAGCTTTCTaGGGCAGAGCTAGTGACCGT +
Preference number: 4 (lower is better)
Translates to: KPCRVKRFLESAELSEAEKRRAF*GRASDR
Trigger: ACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTT...CTCTGCCTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGGTCATCATCGCCGTCTaGCAGAAGAAAGCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKVIIAV*QKKAKR
Trigger: CCGCTTTGCTTTCTTCTGTCAGACGGCGATGATGAC...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCATGCTCCAGCGCCCGGTaGTGGCTGGCTTCTCTACAA +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSCSSAR*WLASLQ
Trigger: TTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCA...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTCTCTTGAGGGACTGGTaGTGGTCGGGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSLLRDW*WSGPAG
Trigger: CCCTGCCGGCCCCGACCAGCACCAGTCCCTCAAGAG...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCCTGGCCGCCCTCGCTaGAGCTGGACGAGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCPGRPR*SWTSCS
Trigger: TGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACGGAGCCAGGACGAGATaGCGCTGCCCGGCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHGARTR*RCPAPA
Trigger: GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCC...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTGGCGCACCGTCATGCTaGCCAGTGCGAGTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTGAPSC*PVRVRS
Trigger: GCTCCTGACTCGCACTGGGCAGCATGACGGTGCGCC...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR GCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGGGACGATGTCCTGGTaGATGATTTCATCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHGTMSW*MISSAP
Trigger: CGGCGCAGATGAAATCATGCACCAGGACATCGTCCC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR GCA 90 bp GTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGGAAAGATGCTGCGATaGGCAGGACGGACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VLVGEVAELIAIKRHLKPGKMLR*AGRTPS
Trigger: TGAAGGCGTCCGTCCTGCGCATCGCAGCATCTTTCC...AGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR GCA 90 bp TCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGCGACGAGCTGCAGGTTTaGCGGGAAAGATGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: SRRRGCRANCHQKASQACDELQV*RERCCD
Trigger: ATCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTC...GCAGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR GCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGACGAGCTGCAGGTTTaGCGGGAAAGATGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHDELQV*RERCCD
Trigger: ATCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTCCTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGAACTTTCGATGGCCGTaGGCTGGCACAGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: LLLFRSRRRGCRANCHQKNFRWP*AGTATG
Trigger: CCCGGTGGCTGTGCCAGCGCACGGCCATCGAAAGTT...CTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR GCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTTATCTTCTGGGACGCTaGGTCCAAGATGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGYLLGR*VQDGFD
Trigger: GTCAAAGCCATCTTGGACGCAGCGTCCCAGAAGATA...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGAGCAGGTGCTCCACATaGGCCAGGCTGTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMSRCST*ARLLPM
Trigger: CATCGGCAACAGCCTGGCGCATGTGGAGCACCTGCT...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTAGCAGGTGCTCCACATaGGCCAGGCTGTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPSRCST*ARLLPM
Trigger: CATCGGCAACAGCCTGGCGCATGTGGAGCACCTGCT...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGGAACACCTCCTCCATaGTTGCCTGCTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFGTPPP*LPASGR
Trigger: TCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTGGGGCAGGGCGACTTTaGCAGTGCCTCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSGAGRL*QCLGSG
Trigger: CCCAGACCCGAGGCACTGGCAAAGTCGCCCTGCCCC...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGTGATAGCGATGAGGTaGATGGAGTCGTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIVIAMR*MESFTA
Trigger: GGCCGTGAACGACTCCATGCACCTCATCGCTATCAC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAAGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAACCTGCATCAGCAGCTTaGCCAGGTCGCCGAGATTCC +
Preference number: 4 (lower is better)
Translates to: ESAELSEAELVTVSSMKEPASAA*PGRRDS
Trigger: GGAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGG...TTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTAGCACTGCCTTCTCGTaGAGGAACAGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPSTAFS*RNRCRC
Trigger: GCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCT...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCAAAGCGGTTGCTCGGTaGCTGAGCCGCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCKAVAR*LSRTLG
Trigger: GCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTT...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTGGGAAGAATAACTGTTaGTTCCAGGTCTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTGKNNC*FQVSCT
Trigger: TGTGCAAGAGACCTGGAAGCAACAGTTATTCTTCCC...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp GCTGAGCGTACTGTCTGTGAGCAGCAGGGGCCGGTAGGGGAGGATTCTCCCATTGGGAAGAATAACTGTTaGTTCCAGGTCTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: AERTVCEQQGPVGEDSPIGKNNC*FQVSCT
Trigger: TGTGCAAGAGACCTGGAAGCAACAGTTATTCTTCCC...AATGGGAGAATCCTCCCCTACCGGCCCCTGCTGCTCACAGACAGTACGCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp GCAAGGAGATGCCTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGGGACAGTGGCATGGCTACGGTaGTGGGAGAAAATCCCCAAG +
Preference number: 4 (lower is better)
Translates to: ARRCLILKTSMRTSGSGTVAWLR*WEKIPK
Trigger: CTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCAC...TGTCCCTGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAGGCATCTCCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR GCA 90 bp GGACAGGCTTGCACCAAAACGATGAAGGTTGTGGGCATCGGAGCAGATATGGGGCATCTGAGGTGCCCGTaGTGGTCCACGTTAAGGATT +
Preference number: 4 (lower is better)
Translates to: GQACTKTMKVVGIGADMGHLRCP*WSTLRI
Trigger: AATCCTTAACGTGGACCAGCACGGGCACCTCAGATG...CCCCATATCTGCTCCGATGCCCACAACCTTCATCGTTTTGGTGCAAGCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR GCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTCTCCTGCCACTCCCGTaGCTGCGCCCAGGCTTTGCG +
Preference number: 4 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETLLPLP*LRPGFA
Trigger: CGCAAAGCCTGGGCGCAGGCACGGGAGTGGCAGGAG...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp CAGGGCGGTAGCCTGGCTGGATTCTGGATCTGTTCTGGAGGCACAGCCAACAGGGGATTCTCCCATTTGTaGAGTTCAGTTAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGGSLAGFWICSGGTANRGFSHL*SSVRAL
Trigger: GAGAGCTCTAACTGAACTGCACAAATGGGAGAATCC...CCTGTTGGCTGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCTACCGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATCTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGA +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHLQACS*LVSTFR
Trigger: TCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAG...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACGAGCTGCTCAGGCACTaGGCCGAGCCGGACGGGCCG +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHELLRH*AEPDGP
Trigger: CGGCCCGTCCGGCTCGGCCCAGTGCCTGAGCAGCTC...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCAATAAAGGAATCTCCTTaGCTTCTAACTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPIKESP*LLTAFG
Trigger: ACCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTAT...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTGAGGGTCCTGGTTCACACTaGGCTCTGAGCCCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LAKPCRVKRFLESAELSEGPGSH*ALSPQP
Trigger: AGGCTGAGGGCTCAGAGCCCAGTGTGAACCAGGACC...CTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp GAAAGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAGCGCCGTCCTGGGACTaGCACTTGTCCACAGGTTGT +
Preference number: 4 (lower is better)
Translates to: ESAELSEAELVTVSSMKEAPSWD*HLSTGC
Trigger: ACAACCTGTGGACAAGTGCCAGTCCCAGGACGGCGC...TTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCGCCTCCGCGCCGTCCTaGGACTGGCACTTGTCCACA +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCASAPS*DWHLST
Trigger: TGTGGACAAGTGCCAGTCCCAGGACGGCGCGGAGGC...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGATCGCGTTGAGCTCCTaGATCTTATTTTCCGCACCG +
Preference number: 4 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVIALSS*ILFSAP
Trigger: CGGTGCGGAAAATAAGATCCAGGAGCTCAACGCGAT...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGCCTGCCTGCGGTaGAACACCTCCTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKLACLR*NTSSML
Trigger: AAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAG...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTGCCTCGCCGAATGCCTaGGGAGGGGCAGGGCGACTT +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSASPNA*GGAGRL
Trigger: AAGTCGCCCTGCCCCTCCCCAGGCATTCGGCGAGGC...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCACCGCCCTCGGAGCTaGAGTTCTCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCHRPRS*SSQSLA
Trigger: GGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTG...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTCACCGCCCTCGGAGCTaGAGTTCTCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTHRPRS*SSQSLA
Trigger: GGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTG...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTCCTTTTTGGCCTCATTaGGCCGTTGTGGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RGTAHATASTQFAILALCPFWPH*AVVGKN
Trigger: ATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGG...ACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp TTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATGGATCACGCCGGTCCTaGCATCTGAGGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: FYSVLVGEVAELIAIKRHGSRRS*HLRCPC
Trigger: GCACGGGCACCTCAGATGCCAGGACCGGCGTGATCC...ATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CCA 90 bp ACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTTAATCACGCCTCCGACAGGGCGGTAGCCTaGCTGGATTCTGGATCTGTT +
Preference number: 4 (lower is better)
Translates to: TPRPPHSLPFWLFVNHASDRAVA*LDSGSV
Trigger: AACAGATCCAGAATCCAGCCAGGCTACCGCCCTGTC...GGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 72 bp GCCCTGGAAACCCCGACTGCTGAGACGTTCTGTGTCTaGACAGACAAAGGCAGATGGCAGGAGTTGCTGATA +
Preference number: 4 (lower is better)
Translates to: ALETPTAETFCV*TDKGRWQELLI
Trigger: TATCAGCAACTCCTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCATTCCTGGTGAAGAATTaGGGCCAAAGTACCACAAAA +
Preference number: 4 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEAFLVKN*GQSTTK
Trigger: TTTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAA...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACGGAACCGTGAGGCTGTaGGGCGGCCCTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHGTVRL*GGPPSS
Trigger: GCTGCTGGGAGGGCCGCCTCACAGCCTCACGGTTCC...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGAGTGCTTGTTCCCAATaGGCTGCTCGCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLSACSQ*AARRPE
Trigger: CTCTGGACGGCGAGCAGCTCATTGGGAACAAGCACT...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGAGTGCTTGTTCCCAATaGGCTGCTCGCCGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKSACSQ*AARRPE
Trigger: CTCTGGACGGCGAGCAGCTCATTGGGAACAAGCACT...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAACATCCTTCTTGTTGTaGAGGCCTGTTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELETSFLL*RPVDRR
Trigger: CCTCCTGTCAACAGGCCTTCACAACAAGAAGGATGT...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGATTTCAGCATTTCCTTaGGCAGCAGCTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLISAFP*AAAGTW
Trigger: CCAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAAT...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGTTTCCGTCCCAACAATaGCTTACCATGTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVFPSQQ*LTMCKH
Trigger: GTGCTTGCACATGGTAAGTCATTGTTGGGACGGAAA...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTTGGCTTATGAGTTCCTaGTTGCCACGCAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSWLMSS*LPRSPL
Trigger: AAGGGGGCTGCGTGGCAATCAGGAACTCATAAGCCA...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGATCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGSDELI*SSALDQ
Trigger: CTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGA...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTCCTTGGCTTCTAACTaGTTTTGGTGGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SYGRQHWSTPHPAETASLSLASN*FWWWRH
Trigger: GTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGA...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCAACTTTCGATGGCCGTaGGCTGGCACAGCCACCGGG +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCNFRWP*AGTATG
Trigger: CCCGGTGGCTGTGCCAGCGCACGGCCATCGAAAGTT...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTAGGTCCCTCAGCAGGTaGTCCACATGCGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTRSLSR*STCARL
Trigger: CAGCCTGGCGCATGTGGAGCACCTGCTGAGGGACCT...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTGTCTCCAGGCGGCGGTaGAGCTCCAGGGACTTGCTG +
Preference number: 4 (lower is better)
Translates to: MNCPESHFRSSILLHQLSVSRRR*SSRDLL
Trigger: CAGCAAGTCCCTGGAGCTGCACCGCCGCCTGGAGAC...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTCATGTGCAAGCACAGTaGACTGCGGCCCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVHVQAQ*TAALET
Trigger: GGTTTCCAGGGCCGCAGTGCACTGTGCTTGCACATG...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGCTGGGCCCTGCCCACTaGCGGCTTCTTTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKALGPAH*RLLFRP
Trigger: GGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCAG...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTCTGGGCCCTGCCCACTaGCGGCTTCTTTTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSLGPAH*RLLFRP
Trigger: GGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCAG...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTCCGCACGCTGGGCCCTaGCCACTGCCGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: MNCPESHFRSSILLHQLSPHAGP*PLPASF
Trigger: AAAAGAAGCCGGCAGTGGGCAGGGCCCAGCGTGCGG...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTCCGCACGCTGGGCCCTaGCCACTGCCGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSPHAGP*PLPASF
Trigger: AAAAGAAGCCGGCAGTGGGCAGGGCCCAGCGTGCGG...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTAAAGCGGTTGCTCGGTaGCTGAGCCGCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: MNCPESHFRSSILLHQLSKAVAR*LSRTLG
Trigger: GCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTT...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAATTCCTCTGCTGCCTTTaGGTTTCTGACACGCACAAC +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEFLCCL*VSDTHN
Trigger: GTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAA...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAGTCAACATTGCTGTCTaGCGACTGCCAACTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELEVNIAV*RLPTLL
Trigger: CAGCAAAGTTGGCAGTCGGCAGACAGCAATGTTGAC...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTCCTCCCGTGGCTCTGTaGACGCTGTCCAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVPPVAL*TLSSSR
Trigger: TCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGG...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTGGGCCTTACCTGAGCTaGTCAGGCACTGGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: MNCPESHFRSSILLHQLSGPYLS*SGTGPS
Trigger: GCTCGGCCCAGTGCCTGAGCAGCTCAGGTAAGGCCC...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp AGGAGATGCCTCATCCTAAAGACTTCGATGAGAACCAGCGGCTCAGGGACAGGCGACAGAGACCACACTTaGGCGTTGTATAACGACAGC +
Preference number: 4 (lower is better)
Translates to: RRCLILKTSMRTSGSGTGDRDHT*ALYNDS
Trigger: GCTGTCGTTATACAACGCGCAAGTGTGGTCTCTGTC...GCCTGTCCCTGAGCCGCTGGTTCTCATCGAAGTCTTTAGGATGAGGCATCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR GCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTCGCAGGGGCATCGCCTaGCCAAGGACGCAGGACCCA +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSRRGIA*PRTQDP
Trigger: TGGGTCCTGCGTCCTTGGGCAGGCGATGCCCCTGCG...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTGGGAGACCTGTAGGATaGGGGTGGAGGCTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSGRPVG*GWRLCG
Trigger: TCCGCAGAGCCTCCACCCGCATCCTACAGGTCTCCC...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTCGAGAGGTCACCGCTTaGTGTTCTGCGAGACGGCGG +
Preference number: 4 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSREVTA*CSARRR
Trigger: CCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCG...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp GAAGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACTGCCACTCCCGTGCCTaGGCCCAGGCTTTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: EELKVFICWHKRHQGKRNCHSRA*AQALRH
Trigger: GTGCCGCAAAGCCTGGGCGCAGGCACGGGAGTGGCA...GTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCTGGAACCAGCTTCTTaGGGCCCAACCCGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCLEPAS*GPTRRP
Trigger: AGGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAG...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGNCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTCACCAGGTGGCAGGTaGACCTGGGTGGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSSPGGR*TWVGGR
Trigger: CCTGCCTCCCACCCAGGTCCACCTGCCACCTGGTGA...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTCTTCTGTACTCAAGGTaGTCACCAGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSLLYSR*SPGGRW
Trigger: CCACCTGCCACCTGGTGACCACCTTGAGTACAGAAG...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGCTCGACTGGACGTCATTaGGCAGCTCTGTTTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRRRGCRANCHQKASQACSTGRH*AALFQP
Trigger: TGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGA...GCAGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTTGTCAAGCTGGTCCTaGTTCACACTGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFLSSWS*FTLGSE
Trigger: CTCAGAGCCCAGTGTGAACCAGGACCAGCTTGACAA...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGATCTCCGCAGAGAACTaGTCACAGAGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMISAEN*SQRCRS
Trigger: GCTCCGGCACCTCTGTGACCAGTTCTCTGCGGAGAT...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTATCTCCGCAGAGAACTaGTCACAGAGGTGCCGGAGC +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPISAEN*SQRCRS
Trigger: GCTCCGGCACCTCTGTGACCAGTTCTCTGCGGAGAT...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATCACCGCCCTCGGAGCTaGAGTTCTCAGAGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PNNLHIRGKAAESLHASYHRPRS*SSQSLA
Trigger: GGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTG...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGAGGTGAGCCATCAGTaGGTTATCCATCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TFEVSKTLQGKALSGKRREVSHQ*VIHLRG
Trigger: GCCGCGGAGATGGATAACCCACTGATGGCTCACCTC...TCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGTCTTCCAACCAGTTCTaGGCAGTCAGTGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLSSNQF*AVSVVF
Trigger: GAAAACTACACTGACTGCCCAGAACTGGTTGGAAGA...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGATCCTTCACCTTGGTGTaGCCCCTCTTGTGGTCGGTC +
Preference number: 4 (lower is better)
Translates to: TFEVSKTLQGKALSGKRRSFTLV*PLLWSV
Trigger: GACCGACCACAAGAGGGGCCACACCAAGGTGAAGGA...TCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGTGTAAAGTGCCTTTATaGGGAGGGTCACACAAGGGC +
Preference number: 4 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQCKVPL*GGSHKG
Trigger: GCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAATTATGCTCCCTTTTCTaGTCTGGAGAGTGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: CARCPVLESRLPASRELELCSLF*SGECRL
Trigger: CAGCCGACACTCTCCAGACCAGAAAAGGGAGCATAA...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCCTTCCCTTCTTCTATTaGATCAATACCCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SEAGAGLSELWSAALVHALPFFY*INTLSL
Trigger: TAAAGAAAGGGTATTGATCCAATAGAAGAAGGGAAG...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTAGGGGCAGGGCTCTCTaGGCTATGGTCGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPRGRAL*AMVGST
Trigger: AGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCT...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTAAGGACTGCAGCATCTaGGCCGTCTGCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: FEVSKTLQGKALSGKRRAKDCSI*AVCFTM
Trigger: CATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTT...AGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp AAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTCTGAGGCAGAGTGCTCCAGTTTCTGCTaGTGCTTTGCCCAGAACTCA +
Preference number: 4 (lower is better)
Translates to: KPCRVKRFLESAELSEAECSSFC*CFAQNS
Trigger: TGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCA...CTCTGCCTCAGAAAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTTGTTGCCGATGTCTGTaGAGGTTGCTATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGCCRCL*RLLSSG
Trigger: CCCAGAAGATAGCAACCTTCACAGACATCGGCAACA...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGCTTGTCCACAGGTTGTaGGGCCAGCAGGTAAATCCC +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMLVHRL*GQQVNP
Trigger: GGGATTTACCTGCTGGCCTCACAACCTGTGGACAAG...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCACCTGTTGACAGGAGGTaGGCCATCAGTGGGTTATCC +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSPVDRR*AISGLS
Trigger: GGATAACCCACTGATGGCTCACCTCCTGTCAACAGG...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTCTGTCGACACCAATCTaGGCTGGCCGTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPLSTPI*AGRGCS
Trigger: GGAGCAGCCACGGCCAGCTCAGATTGGTGTCGACAG...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTGGTCAGTCTTCTTGGTaGTTTCTCAGGAACAGTTTT +
Preference number: 4 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGGQSSW*FLRNSF
Trigger: AAAACTGTTCCTGAGAAATCACCAAGAAGACTGACC...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGCTTCTCTACAAGCCTaGAGCTGGCTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLASLQA*SWLVST
Trigger: AGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACCTCTTGAGGGACTGGTaGTGGTCGGGGCCGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHLLRDW*WSGPAG
Trigger: CCCTGCCGGCCCCGACCAGCACCAGTCCCTCAAGAG...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGTGAGTGGGACGTTTTaGTCCAACCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFVSGTF*SNLCPF
Trigger: AAAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCAC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATGTCCACGCCACACCCTaGAGAAACTGCATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHVHATP*RNCIFV
Trigger: TACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGAC...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGTGCCGAGTCTCTGCATaGTTCCTATTTGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKCRVSA*FLFDSA
Trigger: TGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCA...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCTGCCGAGTCTCTGCATaGTTCCTATTTGATTCCGCA +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFCRVSA*FLFDSA
Trigger: TGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCA...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCCATCAGAGGAAAAGCTaGCGAGTCTCTGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFHQRKS*RVSACF
Trigger: GAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATG...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGTTGTTCCCAATGAGCTaGTCGCCGTCCAGAGACAGG +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLLFPMS*SPSRDR
Trigger: CCTGTCTCTGGACGGCGAGCAGCTCATTGGGAACAA...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTATCCTCCATGCTTGCCTaGTTCTGGAAGACCTTTCGC +
Preference number: 4 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLSSMLA*FWKTFR
Trigger: GCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGA...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAAGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAGTGATAGCGATGAGGTaGATGGAGTCGTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: ESAELSEAELVTVSSMKEVIAMR*MESFTA
Trigger: GGCCGTGAACGACTCCATGCACCTCATCGCTATCAC...TTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTGATAGCGATGAGGTaGATGGAGTCGTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVVIAMR*MESFTA
Trigger: GGCCGTGAACGACTCCATGCACCTCATCGCTATCAC...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTTTCCAGGTTTTCATTTaGTGGTCAGTCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGFQVFI*WSVFLV
Trigger: CACCAAGAAGACTGACCAGCAAATGAAAACCTGGAA...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp AACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCCATGCTTTCTATGAACGTGTaGCTCCTTTTCACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: NPCRQPLGINALAWLQPMLSMNV*LLFTLL
Trigger: TAGCAGAGTGAAAAGGAGGCACACGTTCATAGAAAG...CATGGGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGGGCCTCCACACAGTTTaGCATTTTGGCTCTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSGLHTV*HFGSLL
Trigger: TAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCC...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp GTTTACTCGGAGCTGATGAAATCCAGAGATGTCATACGAAATGCATGTAGAGTTCCTGCGCCCAGGCTTTaGGGCACAGACCGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VYSELMKSRDVIRNACRVPAPRL*GTDRPL
Trigger: CAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGG...AACTCTACATGCATTTCGTATGACATCTCTGGATTTCATCAGCTCCGAGTAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTTGTGGCCAACCTCGCTaGAGCAGCAGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETCGQPR*SSSSCS
Trigger: GGAGCAGCTGCTGCTGCTGCAGCGAGGTTGGCCACA...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATGCGCCCGGTGCTGGCTaGCTTCTCTACAAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PNNLHIRGKAAESLHASYAPGAG*LLYKPA
Trigger: TGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGC...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTTCCAGCGCCCGGTGCTaGCTGGCTTCTCTACAAGCC +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPSSARC*LASLQA
Trigger: GGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGA...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTTTCCTCTTGAGGGACTaGTGCTGGTCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPFLLRD*CWSGPA
Trigger: TGCCGGCCCCGACCAGCACCAGTCCCTCAAGAGGAA...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGTCTAACTGCTTTTGGTaGTGGAGACACCACCTGATG +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKSNCFW*WRHHLM
Trigger: CATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGA...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGCTTCTAACTGCTTTTaGTGGTGGAGACACCACCTG +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIASNCF*WWRHHL
Trigger: CAGGTGGTGTCTCCACCACCAAAAGCAGTTAGAAGC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATCGCACCCTGGAGGTCTaGCCAGTGACGGCTACAAGC +
Preference number: 4 (lower is better)
Translates to: PNNLHIRGKAAESLHASYRTLEV*PVTATS
Trigger: GCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCG...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAGAGTTCTTTAGCTGGTCCTaGATGTCGGCAGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: SAELSEAELVTVSSMKEEFFSWS*MSAAQS
Trigger: GCTCTGTGCTGCCGACATCCAGGACCAGCTAAAGAA...CTCTTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTGTGTGGCCCCTCTTGTaGTCGGTCCAGACGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTVWPLL*SVQTLN
Trigger: GTTCAGCGTCTGGACCGACCACAAGAGGGGCCACAC...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTAGTGCACTGCGGCCCTaGAAACCCCGACTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTSALRP*KPRLLR
Trigger: TCTCAGCAGTCGGGGTTTCCAGGGCCGCAGTGCACT...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGAATCTGAGCTGGCCGTaGCTGCTCCCTCCCGTGGCT +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKANLSWP*LLPPVA
Trigger: AGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATT...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCCAAACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCAGAGATTCATCCTCTTaGTTATTAGACTCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: PKPLQTAPWDQRLSLASTRDSSS*LLDSPP
Trigger: TGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCT...GGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp TCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGCAGCCTGCTGACTTCTTaGTCTTACGTGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: SRRRGCRANCHQKASQACSLLTS*SYVLLT
Trigger: TGTCAGCAGCACGTAAGACCAAGAAGTCAGCAGGCT...GCAGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR TCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTCTCAGGTGCCTCCAGTaGGTGGGACGTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTLRCLQ*VGRFAP
Trigger: TGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAG...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGTGTCCGGAATCTCGCTaGAGGCCGGGTAGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKACPESR*RPGSQG
Trigger: TCCCTGACTACCCGGCCTTCAGCGAGATTCCGGACA...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CTCCTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLFRSRRRGCRANCHQKGLSPG*IRCQRP
Trigger: AGGACGCTGGCATCGGATTCATCCTGGTGATAGACC...CTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR TCA 90 bp CTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCACCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGG +
Preference number: 4 (lower is better)
Translates to: LLFRSRRRGCRANCHQKAPSASP*GRNFRW
Trigger: CCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGG...TGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR TCA 90 bp CTCCTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGAAGGACTGCAGCATCTaGGCCGTCTGCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: LLLFRSRRRGCRANCHQKKDCSI*AVCFTM
Trigger: CATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTT...CTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR TCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTC +
Preference number: 4 (lower is better)
Translates to: PNNLHIRGKAAESLHASYVRTQH*ACRLDV
Trigger: GACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCAC...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATATTTCAGCATTTCCTTaGGCAGCAGCTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHISAFP*AAAGTW
Trigger: CCAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAAT...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCCAAACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCTATATTCACTTTCTATaGACGTGTGCCTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: PKPLQTAPWDQRLSLASTYIHFL*TCASFS
Trigger: TGAAAAGGAGGCACACGTTCATAGAAAGTGAATATA...GGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR TCA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTTGCCAGGGAGAATTATaGTCTCAACAACTAAATCAT +
Preference number: 4 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTCQGEL*SQQLNH
Trigger: ATGATTTAGTTGTTGAGATCATAATTCTCCCTGGCA...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR TCA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACTGGAGCTGCAGTGGATaGCGCGGCTCTGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: RAESLYLLAQEASGKEKHWSCSG*RGSGRP
Trigger: AGGTCTCCCAGAGCCGCGTCATCCACTGCAGCTCCA...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGCGATGTCCTGGTGCATaGTTTCATCCGTGTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMRCPGA*FHPCAW
Trigger: CCAAGCACACGGATGAAATCATGCACCAGGACATCG...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTTCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSSDELI*SSALDQ
Trigger: CTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGA...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTCCCGCCGTCCTCCTCTaGGTCGGACGAGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSPAVLL*VGRVNL
Trigger: CAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGG...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTTCCTTGGCTTCTAACTaGTTTTGGTGGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGSLASN*FWWWRH
Trigger: GTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGA...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTACATCAGAGGAAAAGCTaGCGAGTCTCTGCATGCTTC +
Preference number: 4 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLHQRKS*RVSACF
Trigger: GAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATG...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CATTTACACTCCTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCAGCACGAGGACGAGCTaGAGGTTTGCCGGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: HLHSFYSVLVGEVAELIASTRTS*RFAGKD
Trigger: ATCTTTCCCGGCAAACCTGCAGCTCGTCCTCGTGCT...GGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAGGAGTGTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR GCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTACCTCCCGGAAGCCCTaGTCAAAGTGCCGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSTSRKP*SKCRSC
Trigger: GCAGCTCCGGCACTTTGAGCAGGGCTTCCGGGAGGT...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTCCTGCATCAGCAGCTTaGCCAGGTCGCCGAGATTCC +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSPASAA*PGRRDS
Trigger: GGAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGG...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGAGGAACAGGTGCCGCTaGATGGGCTTGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKARNRCR*MGLNLA
Trigger: GGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCT...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGCATGAAGCTGTAAAGTaGCTTTATGGGGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQHEAVK*LYGEGH
Trigger: GTGACCCTCCCCATAAAGGCACTTTACAGCTTCATG...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGCCACTACGCTTCCTCTaGTGCCTTTGCGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLPLRFL*CLCVSD
Trigger: GTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGG...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTCCACTACGCTTCCTCTaGTGCCTTTGCGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVPLRFL*CLCVSD
Trigger: GTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGG...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGTCAGGTCATCGATACTaGTACACCAGCTTTCTTATG +
Preference number: 4 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWSGHRY*YTSFLM
Trigger: CATAAGAAAGCTGGTGTAGCAGTATCGATGACCTGA...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGCATGCTTCTAAAACATaGACCAATGGGCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSHASKT*TNGQNV
Trigger: CACATTCTGCCCATTGGTGCATGTTTTAGAAGCATG...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTTTTAATCTCAGGAGTTaGCGCCTGGACGATGTAGAC +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGFNLRS*RLDDVD
Trigger: GTCTACATCGTCCAGGCGCCAACTCCTGAGATTAAA...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCAACTGCTTTTGGTGGTaGAGACACCACCTGATGTCA +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFNCFWW*RHHLMS
Trigger: TGACATCAGGTGGTGTCTCCACCACCAAAAGCAGTT...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATTCTAACTGCTTTTGGTaGTGGAGACACCACCTGATG +
Preference number: 4 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHSNCFW*WRHHLM
Trigger: CATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGA...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCTCTAACTGCTTTTGGTaGTGGAGACACCACCTGATG +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFISNCFW*WRHHLM
Trigger: CATCAGGTGGTGTCTCCACCACCAAAAGCAGTTAGA...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTGGGCTCTCTGAGCTATaGTCGGCAGCACTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSGLSEL*SAALVH
Trigger: GTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCC...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTTTCTTTAGCTGGTCCTaGATGTCGGCAGCACAGAGC +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVFFSWS*MSAAQS
Trigger: GCTCTGTGCTGCCGACATCCAGGACCAGCTAAAGAA...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCGGCACTTTGGGCGGATaGAGTCTACCGCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCGTLGG*SLPRSA
Trigger: AGCACTACGCGGTAGACTCCATCCGCCCAAAGTGCC...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTAGGTGCCGGAGCTCCTaGCACTTTGGGCGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSRCRSS*HFGRME
Trigger: CTCCATCCGCCCAAAGTGCCAGGAGCTCCGGCACCT...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTAACTTCTCGATTTCCTaGAGGGCAGCCTCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLNFSIS*RAASAP
Trigger: CGGCGCGGAGGCTGCCCTCCAGGAAATCGAGAAGTT...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTCCAGCTTCTTCAGGCTaGCCTGCCTGCGGTGGAACA +
Preference number: 4 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLPASSG*PACGGT
Trigger: TGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGG...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCGAGGTGAGCCATCAGTaGGTTATCCATCTCCGCGGC +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCEVSHQ*VIHLRG
Trigger: GCCGCGGAGATGGATAACCCACTGATGGCTCACCTC...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTTGTAAAGTGCCTTTATaGGGAGGGTCACACAAGGGC +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSCKVPL*GGSHKG
Trigger: GCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCCCATGCGTGGGTCCGTaGCTGGCCGGGGATGGACCA +
Preference number: 4 (lower is better)
Translates to: ICRLDTERASKVLNRICFPCVGP*LAGDGP
Trigger: TGGTCCATCCCCGGCCAGCCACGGACCCACGCATGG...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CCA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGTTAGGATACACAAGGTaGAAGAAGAGACTACAAGGG +
Preference number: 4 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSLGYTR*KKRLQG
Trigger: CCCTTGTAGTCTCTTCTTCCACCTTGTGTATCCTAA...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGCTTTGTCAGTGGCGCTaGGCTGACGTATCCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKALCQWR*ADVSLQ
Trigger: CTGGAGGGATACGTCAGCTCAGCGCCACTGACAAAG...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTCTCAGGTGCCTCCAGTaGGTGGGACGTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSLRCLQ*VGRFAP
Trigger: TGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAG...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGCACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAAGAGAGTTTTCCAGCTCCCTaGGGAATATCCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SAELSEAELVTVSSMKEESFPAP*GISCCG
Trigger: TCCACAACAGGATATTCCTCAGGGAGCTGGAAAACT...CTCTTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTAGTTTTCCAGCTCCCTaGGGAATATCCTGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSSFPAP*GISCCG
Trigger: TCCACAACAGGATATTCCTCAGGGAGCTGGAAAACT...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTACAGTGGATGAAACATaGAGCTGTAAAGTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGTVDET*SCKVPL
Trigger: TAAAGGCACTTTACAGCTTCATGTTTCATCCACTGT...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCGGAAACCCCGACTGCTaGGACGTTCTGTGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCGNPDC*DVLCLD
Trigger: GTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTCC...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTACACTCCTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCGCATCTCAAGCCTGCTaGCTTCTTGGTCTTACGTGC +
Preference number: 4 (lower is better)
Translates to: LHSFYSVLVGEVAELIAIASQAC*LLGLTC
Trigger: GCACGTAAGACCAAGAAGTCAGCAGGCTTGAGATGC...GATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAGGAGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR GCA 90 bp TTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTCTCCTCCCTCTTCTTaGAGAAGAGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: FEVSKTLQGKALSGKRRASPPSS*RRALPS
Trigger: AGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGA...AGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGACACCTTCCTGGGTTTaGTGGGCAGACCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKATPSWV*WADLAS
Trigger: AGAGGCCAGGTCTGCCCAGCAAACCCAGGAAGGTGT...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR GCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACTGGGCCAGGAGCCTCTaGACGGTGGCCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHWARSL*TVAWLS
Trigger: TGACAACCAGGCCACCGTGCAGAGGCTCCTGGCCCA...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCATATCTTCTGGGACGCTaGGTCCAAGATGGCTTTGAC +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSYLLGR*VQDGFD
Trigger: GTCAAAGCCATCTTGGACGCAGCGTCCCAGAAGATA...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGATGTCTGTGAAGGTTaGTATCTTCTGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPDVCEG*YLLGRC
Trigger: GCAGCGTCCCAGAAGATAGCAACCTTCACAGACATC...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCGCTGAGCCGCGGCCCTaGCGGCTCTCACTCATCTCA +
Preference number: 4 (lower is better)
Translates to: ICRLDTERASKVLNRICFAEPRP*RLSLIS
Trigger: TGAGATGAGTGAGAGCCGGCAGGGCCGCGGCTCAGC...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTCCCCCTCGCAGTTCCTaGTGTATTTCAGCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LRLAKPCRVKRFLESAELPPRSS*CISAFP
Trigger: AGGAAATGCTGAAATACAGCAGGAACTGCGAGGGGG...AAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTAGGAACAGGTGCCGCTaGATGGGCTTGAACCTGGCC +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSRNRCR*MGLNLA
Trigger: GGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCT...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTTTGCTGTCTGCCGACTaGCAACTTTGCTGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SAALVHATPCRNCIFVFSLLSAD*QLCCVL
Trigger: CAAAACACAGCAAAGTTGGCAGTCGGCAGACAGCAA...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTGAGTGGCTGCGCACCCTCTaGGCTAGTGTAGGACTTCCC +
Preference number: 4 (lower is better)
Translates to: LQRDSSSWLLDSPPNATEWLRTL*ASVGLP
Trigger: GGGAAGTCCTACACTAGCGCAGAGGGTGCGCAGCCA...CTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACTTCCTCTTGAGGGACTaGTGCTGGTCGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHFLLRD*CWSGPA
Trigger: TGCCGGCCCCGACCAGCACCAGTCCCTCAAGAGGAA...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTTATGGTCGGCAGCACTaGTCCACGCCACACCCTGCA +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSYGRQH*STPHPA
Trigger: TGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATA...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACAAGGTGGTCACCAGGTaGCAGGTGGACCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHKVVTR*QVDLGG
Trigger: CCCACCCAGGTCCACCTGCCACCTGGTGACCACCTT...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACACGGCTACAAGCCGCTaGGAGGGTAGCGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHTATSR*EGSVRG
Trigger: TCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGT...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCAACTGAGCTTGTCGACTaGACGTCATTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LLFRSRRRGCRANCHQKATELVD*TSLGSS
Trigger: AGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGT...TGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGCCAGCTCCTTCACCTTaGTGTGGCCCCTCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKAPAPSP*CGPSCG
Trigger: ACCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGG...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCATGTAAAGTGCCTTTATaGGGAGGGTCACACAAGGGC +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSCKVPL*GGSHKG
Trigger: GCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TCAGATCCTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCAGACCTCTGTGGCCATaGCCGTCGCCTCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SDPSKRFILLVIRLSSKCRPLWP*PSPPVC
Trigger: ACACACCGGAGGCGACGGCCATGGCCACAGAGGTCT...GCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAGGATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCGACACCAGCTCACTGTaGACGAGATGCCGAGACCTC +
Preference number: 4 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGDTSSL*TRCRDL
Trigger: GAGGTCTCGGCATCTCGTCCACAGTGAGCTGGTGTC...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp GAAGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACGGGAGGGGTCCGGACTaGAGCTGTGGACTAGGAATC +
Preference number: 4 (lower is better)
Translates to: EELKVFICWHKRHQGKRNGRGPD*SCGLGI
Trigger: GATTCCTAGTCCACAGCTCCAGTCCGGACCCCTCCC...GTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTCCTCCTCATCATCCGTaGGCCAGACGCTTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETPPHHP*ARRFQH
Trigger: ATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGG...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp ACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTTAATCACGCCTCCAACACCTCAACAAACTaGCATCTGAGGAAGACTGAC +
Preference number: 4 (lower is better)
Translates to: TPRPPHSLPFWLFVNHASNTSTN*HLRKTD
Trigger: GTCAGTCTTCCTCAGATGCCAGTTTGTTGAGGTGTT...GGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCTGCATGCTTCCTATTTaGTTCCGCACCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCCMLPI*FRTLEV
Trigger: GACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCA...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGAAGGACTGCAGCATCTaGGCCGTCTGCTTCACCATG +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKAKDCSI*AVCFTM
Trigger: CATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTT...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ACTACTTTTACCTTTCTGACCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTGTCCACAGGTTGTaGGGCCAGCAGGTAAATCCC +
Preference number: 4 (lower is better)
Translates to: TTFTFLTFEVSKTLQGKALVHRL*GQQVNP
Trigger: GGGATTTACCTGCTGGCCTCACAACCTGTGGACAAG...CGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGGTCAGAAAGGTAAAAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGGATGGCAGGAGTTGCTaGTATTTATTCAAACGTCAT +
Preference number: 4 (lower is better)
Translates to: HASYLIPHPGGLASDGYKDGRSC*YLFKRH
Trigger: ATGACGTTTGAATAAATATCAGCAACTCCTGCCATC...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTGGAAACCCCGACTGCTaGGACGTTCTGTGTCTTGAC +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPGNPDC*DVLCLD
Trigger: GTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTCC...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCAGTGTCGGCTGCATTGTaGTTCTGTAATGGTTCCACT +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSVSAAL*FCNGST
Trigger: AGTGGAACCATTACAGAATCACAATGCAGCCGACAC...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTGTGACTTGTCACGTCTaGTCCGATGCTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSVTCHV*SDALPG
Trigger: GCCTGGAAGAGCATCGGATCAGACGTGACAAGTCAC...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGCCCCCTTTACTCTATaGACTGTCCTGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLAPFTL*TVLNPI
Trigger: AATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGATAGTCAGTGGCTTATaGGTTCCTGATTGCCACGCA +
Preference number: 4 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLIVSGL*VPDCHA
Trigger: TGCGTGGCAATCAGGAACTCATAAGCCACTGACTAT...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTACTGCCCGCATCCCGTaGGTTAGAAACAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPTARIP*VRNKLL
Trigger: TAAAAGCTTGTTTCTAACTCACGGGATGCGGGCAGT...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTGGTCGGATACGGGCATaGGTGAAAACACAGATGAGG +
Preference number: 4 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSGRIRA*VKTQMR
Trigger: CCTCATCTGTGTTTTCACTCATGCCCGTATCCGACC...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp ACTACTTTTACCTTTCTGACCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGGCTTCTCTACAAGCCTaGAGCTGGCTGGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: TTFTFLTFEVSKTLQGKAASLQA*SWLVST
Trigger: AGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGC...CGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGGTCAGAAAGGTAAAAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR GCA 90 bp GATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTGAGTGGGACGTTTTaGTCCAACCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: DHVCCEPDTSGLSLPLHVVSGTF*SNLCPF
Trigger: AAAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCAC...AACATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGGACGAGCTGCAGGTTTaGCGGGAAAGATGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKADELQV*RERCCD
Trigger: ATCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTC...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTGTGATAGCGATGAGGTaGATGGAGTCGTTCACGGCC +
Preference number: 4 (lower is better)
Translates to: MNCPESHFRSSILLHQLSVIAMR*MESFTA
Trigger: GGCCGTGAACGACTCCATGCACCTCATCGCTATCAC...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTGAGGTGAATGCTCAGGCCTaGCCCAAACCCCTGCAGACA +
Preference number: 4 (lower is better)
Translates to: LQRDSSSWLLDSPPNATEVNAQA*PKPLQT
Trigger: TGTCTGCAGGGGTTTGGGGCAGGCCTGAGCATTCAC...CTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTCTTCTGTACTCAAGGTaGTCACCAGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLLLYSR*SPGGRW
Trigger: CCACCTGCCACCTGGTGACCACCTTGAGTACAGAAG...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTCTCCTCGAAGCTaGCCAGGTCCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPISPRS*PGPSAG
Trigger: ACCTGCTGAGGGACCTGGCCAGCTTCGAGGAGAAAT...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTATTTCTCCTCGAAGCTaGCCAGGTCCCTCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLISPRS*PGPSAG
Trigger: ACCTGCTGAGGGACCTGGCCAGCTTCGAGGAGAAAT...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGCTTCCCTTCTTCTATTaGATCAATACCCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDELPFFY*INTLSL
Trigger: TAAAGAAAGGGTATTGATCCAATAGAAGAAGGGAAG...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCTGTAAATAAGGCTCTGCACACAAAATCACAAAGGCATCACAAGAACGACACGGGACGATGGGGTTTCTaGCCAAAGGAACTGGACGGA +
Preference number: 4 (lower is better)
Translates to: PVNKALHTKSQRHHKNDTGRWGF*PKELDG
Trigger: TCCGTCCAGTTCCTTTGGCCAGAAACCCCATCGTCC...CGTGTCGTTCTTGTGATGCCTTTGTGATTTTGTGTGCAGAGCCTTATTTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp CCAGAGATGTCATACGAAATGCATGTAGAGTTTGATAGGAAAACCTCATCGTGTGAAAGCCGCAGCCACTaGCAGGGAGCTGTGCACTGT +
Preference number: 4 (lower is better)
Translates to: PEMSYEMHVEFDRKTSSCESRSH*QGAVHC
Trigger: ACAGTGCACAGCTCCCTGCCAGTGGCTGCGGCTTTC...ACACGATGAGGTTTTCCTATCAAACTCTACATGCATTTCGTATGACATCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTGATTCCCAGCAGACCTaGCCTCAAAGTGGACAACCT +
Preference number: 4 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSDSQQT*PQSGQP
Trigger: AGGTTGTCCACTTTGAGGCCAGGTCTGCTGGGAATC...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 72 bp TCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTaGTTGCTATTTTGTCATCATCGCCGTCTGACAGAA +
Preference number: 4 (lower is better)
Translates to: SSAAFAFLTRTT*LLFCHHRRLTE
Trigger: TTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACCTCAGGTGCCTCCAGTaGGTGGGACGTTTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHLRCLQ*VGRFAP
Trigger: TGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAG...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTCACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCACACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTGCATGCTTCCTATTTaGTTCCGCACCCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: PNNLHIRGKAAESLHASYCMLPI*FRTLEV
Trigger: GACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCA...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTGCAGCTGGTACTTGGTaGTCCTCTGCACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSAAGTW*SSALAS
Trigger: TGAAGCCAGTGCAGAGGATCACCAAGTACCAGCTGC...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCAGACGTTCTGTGTCTTaGCAGACAAAGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCRRSVS*QTKADG
Trigger: GCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCT...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCAGATCCTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCTCCCAAGTGCGCTCCTaGCGAAGACGTTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SDPSKRFILLVIRLSSKCSQVRS*RRRLHR
Trigger: CCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGA...GCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAGGATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR TCA 90 bp CCAGAGATGTCATACGAAATGCATGTAGAGTTTGATAGGAAAACCTCATCGTGTAAGAGCAGCCCCTGCTaGGCTGAGCGTACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PEMSYEMHVEFDRKTSSCKSSPC*AERTVC
Trigger: ACAGACAGTACGCTCAGCTCAGCAGGGGCTGCTCTT...ACACGATGAGGTTTTCCTATCAAACTCTACATGCATTTCGTATGACATCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCAGCACTGCCTTCTCGTaGAGGAACAGGTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ICRLDTERASKVLNRICFSTAFS*RNRCRC
Trigger: GCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCT...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGCCACTACGCTTCCTCTaGTGCCTTTGCGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKAPLRFL*CLCVSD
Trigger: GTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTGG...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTGAGCTGAGATTGCACCACTaGACTCCATCCAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: LQRDSSSWLLDSPPNATELRLHH*TPSSLG
Trigger: GCCCAAGCTGGATGGAGTGCAGTGGTGCAATCTCAG...CTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTGGGACGATGTCCTGGTaGATGATTTCATCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSGTMSW*MISSPA
Trigger: GGCCGGAGATGAAATCATGCACCAGGACATCGTCCC...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR GCA 90 bp GAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGCTGACTTCTTGGGTTGCCGAGCTAATTaGCATCAAAAGGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: EVAELIAIKRHLKPADFLGCRAN*HQKASQ
Trigger: TTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACC...CAAGAAGTCAGCAGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTGGTGCCTCCAGTGAGTaGGACGTTTTGCTCCAACCT +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSGASSE*DVLLQP
Trigger: AGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACC...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTGACCGTGTATTTACCTaGAACCAGCTTCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSDRVFT*NQLLGA
Trigger: GGCCCCAAGAAGCTGGTTCCAGGTAAATACACGGTC...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGATAAAGGAATCTCCTTaGCTTCTAACTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQIKESP*LLTAFG
Trigger: ACCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTAT...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCCCGTTTCCTCCTTTTTaGCCTCATTGGGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGPFPPF*PHWAVV
Trigger: CACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGG...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTATCATCACACTCAGGTaGGTCACAAGCCAGGGGACT +
Preference number: 4 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETIITLR*VTSQGT
Trigger: AGTCCCCTGGCTTGTGACCCACCTGAGTGTGATGAT...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp ACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTTAATCACGCCTCCGGGAGTCAGAAGAGTTaGATGCTGAATGAAGAAATT +
Preference number: 4 (lower is better)
Translates to: TPRPPHSLPFWLFVNHASGSQKS*MLNEEI
Trigger: AATTTCTTCATTCAGCATCCAACTCTTCTGACTCCC...GGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGCCTTGTAAATCGCGTTaGGCTCCTGGATCTTATTTT +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMPCKSR*APGSYF
Trigger: AAAATAAGATCCAGGAGCTCAACGCGATTTACAAGG...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACGCAGCTGGTACTTGGTaGTCCTCTGCACTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHAAGTW*SSALAS
Trigger: TGAAGCCAGTGCAGAGGATCACCAAGTACCAGCTGC...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTCTGCCTTTGCGTTTCTaGCACGCACAACCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSLPLRF*HAQPCC
Trigger: GCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAG...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTCCAATGGGCAGAATGTaGCCAGATCTGGGTATTGAA +
Preference number: 4 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSPMGRM*PDLGIE
Trigger: TTCAATACCCAGATCTGGTCACATTCTGCCCATTGG...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCGTGAGTGGGACGTTTTaGTCCAACCTTTGCCCTTTT +
Preference number: 4 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCVSGTF*SNLCPF
Trigger: AAAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCAC...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCACACCCTGCAGAAACTaGATCTTTGTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFTPCRN*IFVFSL
Trigger: TAAAGAAAATACAAAGATGCAGTTTCTGCAGGGTGT...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ACAACCTTGTTGCTATTTTGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGCGGTCCACGCCACACCCTaGAGAAACTGCATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: TTLLLFCHHRRLTEESKAVHATP*RNCIFV
Trigger: TACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGAC...CGCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCGGAAAGATGCTGCGATaGGCAGGACGGACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ICRLDTERASKVLNRICFGKMLR*AGRTPS
Trigger: TGAAGGCGTCCGTCCTGCGCATCGCAGCATCTTTCC...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTGATGTCTGTGAAGGTTaGTATCTTCTGGGACGCTGC +
Preference number: 4 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLDVCEG*YLLGRC
Trigger: GCAGCGTCCCAGAAGATAGCAACCTTCACAGACATC...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGGCCGACTGCCAACTTTaGTGTGTTTTGAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKADCQL*CVLSFI
Trigger: TATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGC...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCCCACTGAGCACTACCTaGATCCAAGTTGATAGACCC +
Preference number: 4 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGPLSTT*IQVDRP
Trigger: GGGTCTATCAACTTGGATGCAGGTAGTGCTCAGTGG...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCATAAAGGAATCTCCTTaGCTTCTAACTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIIKESP*LLTAFG
Trigger: ACCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTAT...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTGGAGGTATAAAGGAATCTCCTTaGCTTCTAACTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GKAAESLHASYLIPHPGGIKESP*LLTAFG
Trigger: ACCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTAT...ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTACTGAGCTTGTCGACTaGACGTCATTGGGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSTELVD*TSLGSS
Trigger: AGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGT...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTAAGGTTGCTATCTTCTaGGACGCTGCGTCCAAGATG +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPKVAIF*DAASKM
Trigger: CATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTT...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CAA 72 bp TCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTaGCTATTTTGTCATCATCGCCGTCTGACAGAAGAA +
Preference number: 4 (lower is better)
Translates to: SAAFAFLTRTTL*LFCHHRRLTEE
Trigger: TTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ACTACTTTTACCTTTCTGACCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGATTTCAGCATTTCCTTaGGCAGCAGCTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: TTFTFLTFEVSKTLQGKAISAFP*AAAGTW
Trigger: CCAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAAT...CGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGGTCAGAAAGGTAAAAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR TCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTATTTCAGCATTTCCTTaGGCAGCAGCTGGTACTTGG +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSISAFP*AAAGTW
Trigger: CCAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAAT...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGGATGGCAGGAGTTGCTaGTATTTATTCAAACGTCAT +
Preference number: 4 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMDGRSC*YLFKRH
Trigger: ATGACGTTTGAATAAATATCAGCAACTCCTGCCATC...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTAGACGTTCTGTGTCTTaGCAGACAAAGGCAGATGGC +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSRRSVS*QTKADG
Trigger: GCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCT...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTGAGCCCAGGAAGAGCTaGAAGTCTTTATTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETEPRKS*KSLFVG
Trigger: GCCAACAAATAAAGACTTTCAGCTCTTCCTGGGCTC...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTTCTCCTCCCTCTTCTTaGAGAAGAGCACTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSSPPSS*RRALPS
Trigger: AGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGA...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTCCTTGGCTTCTAACTaGTTTTGGTGGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSSLASN*FWWWRH
Trigger: GTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGA...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCACACCCTGCAGAAACTaGATCTTTGTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFTPCRN*IFVFSL
Trigger: TAAAGAAAATACAAAGATGCAGTTTCTGCAGGGTGT...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTCATGAAGCTGTAAAGTaGCTTTATGGGGAGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSHEAVK*LYGEGH
Trigger: GTGACCCTCCCCATAAAGGCACTTTACAGCTTCATG...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACAGCATTGACCGCCTGTaGTGCGATGGCATTTGTAAG +
Preference number: 4 (lower is better)
Translates to: RAESLYLLAQEASGKEKHSIDRL*CDGICK
Trigger: CTTACAAATGCCATCGCAGCACAGGCGGTCAATGCT...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCCTTCTGTACTCAAGGTaGTCACCAGGTGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ICRLDTERASKVLNRICFLLYSR*SPGGRW
Trigger: CCACCTGCCACCTGGTGACCACCTTGAGTACAGAAG...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTACACCAGCTTTCTTATaGTGTTTGTCTGTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPTPAFL*CLSVLS
Trigger: AGACAGAACAGACAAACACCATAAGAAAGCTGGTGT...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp ACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTTAATCACGCCTCCAAACAAAAACCTGACTaGAATAAGACCTTGAAACAG +
Preference number: 4 (lower is better)
Translates to: TPRPPHSLPFWLFVNHASKQKPD*NKTLKQ
Trigger: CTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTGTTT...GGAGGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 72 bp CTTTGCGTTTCTGACACGCACAACCTTGTTGCTATTTaGTCATCATCGCCGTCTGACAGAAGAAAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LCVSDTHNLVAI*SSSPSDRRKQS
Trigger: GCTTTGCTTTCTTCTGTCAGACGGCGATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACATGGTCTCTAAGCAGTaGCTTGTCACGTCTGATCCG +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHMVSKQ*LVTSDP
Trigger: CGGATCAGACGTGACAAGTCACTGCTTAGAGACCAT...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTCTCTATGAACTGTCCTaGATCCCATTTCAGGTCATC +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPLYELS*IPFQVI
Trigger: GATGACCTGAAATGGGATTCAGGACAGTTCATAGAG...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTGCCCCCTTTACTCTATaGACTGTCCTGAATCCCATT +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSAPFTL*TVLNPI
Trigger: AATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGC...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGTGGGCCAAAAAGTCCAAAGCCTCTACAGTTTGGAGACATCACAGCTGACTGCAGAACAGTATTTTCATaGGCCTTTTTCAGGCCATAT +
Preference number: 4 (lower is better)
Translates to: SGPKSPKPLQFGDITADCRTVFS*AFFRPY
Trigger: ATATGGCCTGAAAAAGGCTCATGAAAATACTGTTCT...GCAGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTGGACTTTTTGGCCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTTTTCTGCTGATGCTTTaGCCAGAACTCATCGAAGGC +
Preference number: 4 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSFLLML*PELIEG
Trigger: GCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAA...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp CACTACGCTTCCTCTGCTGCCTTTGCGTTTCTGACACGCACAACCTTGTTGCTACAAATATTTTGTTTGTaGTCCATGTGTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HYASSAAFAFLTRTTLLLQIFCL*SMCAGK
Trigger: TTTTCCAGCACACATGGAGCACAAACAAAATATTTG...TAGCAACAAGGTTGTGCGTGTCAGAAACGCAAAGGCAGCAGAGGAAGCGTAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp GAAGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACGCATTGAAATTTAGCTaGTCCCTTGACTCCAGGACC +
Preference number: 4 (lower is better)
Translates to: EELKVFICWHKRHQGKRNALKFS*SLDSRT
Trigger: GGTCCTGGAGTCAAGGGAGCAGCTAAATTTCAATGC...GTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp CCAGAGATGTCATACGAAATGCATGTAGAGTTTGATAGGAAAACCTCATCGTGTATTGACCGCCTGTGCTaGGATGGCATTTGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: PEMSYEMHVEFDRKTSSCIDRLC*DGICKS
Trigger: GCTCTTACAAATGCCATCGCAGCACAGGCGGTCAAT...ACACGATGAGGTTTTCCTATCAAACTCTACATGCATTTCGTATGACATCTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR GCA 90 bp ATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTGATTCCGCACCCTATGATTTCATCCGTGTaGTTGGAAACCGCATTTAAT +
Preference number: 4 (lower is better)
Translates to: IRGKAAESLHASYLIPHPMISSV*LETAFN
Trigger: ATTAAATGCGGTTTCCAAGCACACGGATGAAATCAT...AGGGTGCGGAATCAAATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS-3UTR CCA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTTCTTCCAACCAGTTCTaGGCAGTCAGTGTAGTTTTC +
Preference number: 4 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPSSNQF*AVSVVF
Trigger: GAAAACTACACTGACTGCCCAGAACTGGTTGGAAGA...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
3UTR CAA 72 bp ATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTTaGCTGTGTTTTGAGCTTTATAGTCAGTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: MTVNIAVCRLPT*LCFELYSQWLM
Trigger: CATAAGCCACTGACTATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTCCTGGTGAAGAATTaGGGCCAAAGTACCACAAAA +
Preference number: 4 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSFLVKN*GQSTTK
Trigger: TTTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAA...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTACAGTGGATGAAACATaGAGCTGTAAAGTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTTVDET*SCKVPL
Trigger: TAAAGGCACTTTACAGCTTCATGTTTCATCCACTGT...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCACAAATATTTTGTTTGTaGTCCATGTGTGCTGGAAAA +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSQIFCL*SMCAGK
Trigger: TTTTCCAGCACACATGGAGCACAAACAAAATATTTG...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGTGGGCCAAAAAGTCCAAAGCCTCTACAGTTTGGAGACATCACAGCTGACTGCCTAACCAAGTTATTTTaGTTAGCTTCCCTTTGTGTA +
Preference number: 4 (lower is better)
Translates to: SGPKSPKPLQFGDITADCLTKLF*LASLCV
Trigger: TACACAAAGGGAAGCTAAGCAAAATAACTTGGTTAG...GCAGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTGGACTTTTTGGCCCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCACTTCCCTTCTTCTATTaGATCAATACCCTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSLPFFY*INTLSL
Trigger: TAAAGAAAGGGTATTGATCCAATAGAAGAAGGGAAG...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CATCCACCAAAGCAGAATTCCCACATTAGGATACACAAGGTGGAAGAAGAGACTCACAGTTTGCCATTTTaGCTCTTTGTTAATCACGCC +
Preference number: 4 (lower is better)
Translates to: HPPKQNSHIRIHKVEEETHSLPF*LFVNHA
Trigger: GGCGTGATTAACAAAGAGCCAAAATGGCAAACTGTG...AGTCTCTTCTTCCACCTTGTGTATCCTAATGTGGGAATTCTGCTTTGGTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
3UTR CAA 72 bp AAATCAATAAAACAAAAACCTGACTGGAATAAGACCTaGAAACAGCACGACTGGCCACGTCTATCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: KSIKQKPDWNKT*KQHDWPRLSGV
Trigger: GACGCCAGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTGTTTTATTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACCACAGTGATTCCTGGTaGAGAATTGAGGCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHHSDSW*RIEAKV
Trigger: TACTTTGGCCTCAATTCTTCACCAGGAATCACTGTG...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR TCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTGATGGCAGGAGTTGCTaGTATTTATTCAAACGTCAT +
Preference number: 4 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLDGRSC*YLFKRH
Trigger: ATGACGTTTGAATAAATATCAGCAACTCCTGCCATC...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCTCCTTGGCTTCTAACTaGTTTTGGTGGTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: ICRLDTERASKVLNRICFSLASN*FWWWRH
Trigger: GTGTCTCCACCACCAAAAGCAGTTAGAAGCCAAGGA...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTTTTGTGCTCCATGTGTaGTGGAAAATAACGCAGATT +
Preference number: 4 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLFVLHV*WKITQI
Trigger: AATCTGCGTTATTTTCCAGCACACATGGAGCACAAA...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CCA 90 bp CCAGGGAGAATTATGATCTCAACAACTAAATCATTTCCAAACCCTTACTGCTGTCTCATTGGGCCGTTGTaGGGAAGAATAACTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PGRIMISTTKSFPNPYCCLIGPL*GRITVA
Trigger: AGCAACAGTTATTCTTCCCCACAACGGCCCAATGAG...ACAGCAGTAAGGGTTTGGAAATGATTTAGTTGTTGAGATCATAATTCTCCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTTCATCCGTGTGCTTaGAAACCGCATTTAATCTCT +
Preference number: 4 (lower is better)
Translates to: PNNLHIRGKAAESLHASYFHPCA*KPHLIS
Trigger: AGAGATTAAATGCGGTTTCCAAGCACACGGATGAAA...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS-3UTR TCA 90 bp GTTTACTCGGAGCTGATGAAATCCAGAGATGTCATACGAAATGCATGTAGAGTTGACACATCAATTTGGTaGTCCGTTTCCTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VYSELMKSRDVIRNACRVDTSIW*SVSSFL
Trigger: CAAAAAGGAGGAAACGGATCACCAAATTGATGTGTC...AACTCTACATGCATTTCGTATGACATCTCTGGATTTCATCAGCTCCGAGTAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp CCTGTAAATAAGGCTCTGCACACAAAATCACAAAGGCATCACAAGAACGACACGTCAGGCCATATTTCTTaGTGTTTTGGCTCTAAAAAG +
Preference number: 4 (lower is better)
Translates to: PVNKALHTKSQRHHKNDTSGHIS*CFGSKK
Trigger: CTTTTTAGAGCCAAAACATCAAGAAATATGGCCTGA...CGTGTCGTTCTTGTGATGCCTTTGTGATTTTGTGTGCAGAGCCTTATTTACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR TCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACGTAGGAGAAGCTTTCTaGCCTTTGAGGTTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHVGEAF*PLRLAK
Trigger: TTTTGCTAACCTCAAAGGTCAGAAAGCTTCTCCTAC...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453297.5
CDS-3UTR GCA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTACACCCTGCAGAAACTaGATCTTTGTATTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTTPCRN*IFVFSL
Trigger: TAAAGAAAATACAAAGATGCAGTTTCTGCAGGGTGT...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR GCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCCACGCACAACCTTGTTaGTATTTTGTCATCATCGCC +
Preference number: 4 (lower is better)
Translates to: ICRLDTERASKVLNRICFHAQPC*YFVIIA
Trigger: GGCGATGATGACAAAATAGCAACAAGGTTGTGCGTG...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp CCAGGGAGAATTATGATCTCAACAACTAAATCATTTCCAAACCCTTACTGCTGTGACACATCAATTTGGTaGTCCGTTTCCTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: PGRIMISTTKSFPNPYCCDTSIW*SVSSFL
Trigger: CAAAAAGGAGGAAACGGATCACCAAATTGATGTGTC...ACAGCAGTAAGGGTTTGGAAATGATTTAGTTGTTGAGATCATAATTCTCCCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR GCA 90 bp CCAGGGAGAATTATGATCTCAACAACTAAATCATTTCCAAACCCTTACTGCTGTGCCTCCTTTTCACTCTaGTATGTAAGACAGATGCAT +
Preference number: 4 (lower is better)
Translates to: PGRIMISTTKSFPNPYCCASFSL*YVRQMH
Trigger: ATGCATCTGTCTTACATAGCAGAGTGAAAAGGAGGC...ACAGCAGTAAGGGTTTGGAAATGATTTAGTTGTTGAGATCATAATTCTCCCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CCA 90 bp CTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTGAGGAGAAAGAGACCTTGTaGTCAGCATTACATTTCTTT +
Preference number: 4 (lower is better)
Translates to: LQRDSSSWLLDSPPNATEEKETL*SALHFF
Trigger: AAAGAAATGTAATGCTGACCACAAGGTCTCTTTCTC...CTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR TCA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCACAGTGGATGAAACATaGAGCTGTAAAGTGCCTTTA +
Preference number: 4 (lower is better)
Translates to: ICRLDTERASKVLNRICFTVDET*SCKVPL
Trigger: TAAAGGCACTTTACAGCTTCATGTTTCATCCACTGT...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR TCA 90 bp GTTTACTCGGAGCTGATGAAATCCAGAGATGTCATACGAAATGCATGTAGAGTTCTGATAGCAAAAATCTaGATAAGGCAAATAGAGCTC +
Preference number: 4 (lower is better)
Translates to: VYSELMKSRDVIRNACRVLIAKI*IRQIEL
Trigger: GAGCTCTATTTGCCTTATTCAGATTTTTGCTATCAG...AACTCTACATGCATTTCGTATGACATCTCTGGATTTCATCAGCTCCGAGTAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CCA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACATAAAGGAATCTCCTTaGCTTCTAACTGCTTTTGGT +
Preference number: 4 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHIKESP*LLTAFG
Trigger: ACCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTAT...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS GCA 90 bp TGCAGAGGCCGCAGCAGCCCAGCGCGCCCCTTCCGTGTGGCCGCATaGCACCCGCGCCGCGCCCAGGTAAGCAGGTCCGTGGGTCGCTGG +
Preference number: 5 (lower is better)
Translates to: CRGRSSPARPFRVAA*HPRRAQVSRSVGRW
Trigger: CCAGCGACCCACGGACCTGCTTACCTGGGCGCGGCGCGGGTGGCATGCGGCCACACGGAAGGGGCGCGCTGGGCTGCTGCGGCCTCTGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS GCA 90 bp CAGCAGCCCCACAGCAGCCAGGCGGAGTGCCGGGCCTTAGCGCCCTaGCCCGGTGGGAGCTCCTGGCCACGACCAGCTCCGGGGAAGGGC +
Preference number: 5 (lower is better)
Translates to: QQPHSSQAECRALAP*PGGSSWPRPAPGKG
Trigger: GCCCTTCCCCGGAGCTGGTCGTGGCCAGGAGCTCCCACCGGGGCAGGGCGCTAAGGCCCGGCACTCCGCCTGGCTGCTGTGGGGCTGCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS GCA 90 bp GCCAGTGCCTCGGGTCTGGGGGCCACCGGCTGCACGGGCCGCGTCTaGCTGGCCGCCAGCTTCTTCAGGCTGGCCTGCCTGCGGTGGAAC +
Preference number: 5 (lower is better)
Translates to: ASASGLGATGCTGRV*LAASFFRLACLRWN
Trigger: GTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCAGCCGGTGGCCCCCAGACCCGAGGCACTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 90 bp GGGCAGGGCGACTTTGCCAGTGCCTCGGGTCTGGGGGCCACCGGCTaGACGGGCCGCGTCTGCCTGGCCGCCAGCTTCTTCAGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GQGDFASASGLGATG*TGRVCLAASFFRLA
Trigger: GGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCAGCCGGTGGCCCCCAGACCCGAGGCACTGGCAAAGTCGCCCTGCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 90 bp GCATGCCACCCGCGCCGCGCCCAGGTAAGCAGGTCCGTGGGTCGCTaGGTCCATGCGTGGGTCCGTGGCTGGCCGGGGATGGACCAGCCC +
Preference number: 5 (lower is better)
Translates to: ACHPRRAQVSRSVGR*VHAWVRGWPGMDQP
Trigger: GGGCTGGTCCATCCCCGGCCAGCCACGGACCCACGCATGGACCCAGCGACCCACGGACCTGCTTACCTGGGCGCGGCGCGGGTGGCATGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp GGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGGCACCCAGCCCTCCTaGCCAGTGGTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GRPRCSWTSCSARPTPGSGTQPS*PVVGSL
Trigger: CAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCC...CGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGCAAGGCGGCTCCGGGTaGCACGCTCGGCCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: HRNPMRRRVRLSQGGPKAQGGSG*HARPRL
Trigger: GAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTG...CGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTTCCTCGCCCGGGCCCTaGGCAGCGTCACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTSSPGP*AASRVG
Trigger: GCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGA...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS GCA 90 bp CCCAGAGGTCCCGGCACAGCAGTGACAGCCGGCGCACCGTCATGCTaGCCAGTGCGAGTCAGGAGCCCCCGACCCGGCTCCCGGAACGCC +
Preference number: 5 (lower is better)
Translates to: PRGPGTAVTAGAPSC*PVRVRSPRPGSRNA
Trigger: GGCGTTCCGGGAGCCGGGTCGGGGGCTCCTGACTCGCACTGGGCAGCATGACGGTGCGCCGGCTGTCACTGCTGTGCCGGGACCTCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000486210.1
CDS GCA 90 bp GCGCCCAGAGGTCCCGGCACAGCAGTGACAGCCGGCGCACCGTCATaGTGCCCAGTGCGAGTCAGGAGCCCCCGACCCGGCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: APRGPGTAVTAGAPS*CPVRVRSPRPGSRN
Trigger: GTTCCGGGAGCCGGGTCGGGGGCTCCTGACTCGCACTGGGCAGCATGACGGTGCGCCGGCTGTCACTGCTGTGCCGGGACCTCTGGGCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000486210.1
CDS CCA 90 bp GTGCCTCGGGTCTGGGGGCCACCGGCTGCACGGGCCGCGTCTGCCTaGCCGCCAGCTTCTTCAGGCTGGCCTGCCTGCGGTGGAACACCT +
Preference number: 5 (lower is better)
Translates to: VPRVWGPPAARAASA*PPASSGWPACGGTP
Trigger: AGGTGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCAGCCGGTGGCCCCCAGACCCGAGGCAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 90 bp TGGCCCTCCGGTAGGGCCCTCTCCGGAGCGCACCGCCCTCGGAGCTaGAGTTCTCAGAGCCTCGCCGAATGCCTGGGGAGGGGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: WPSGRALSGAHRPRS*SSQSLAECLGRGRA
Trigger: CGCCCTGCCCCTCCCCAGGCATTCGGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTGCGCTCCGGAGAGGGCCCTACCGGAGGGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGCACCCAGCCCTCCTaGCCAGTGGTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: WPPSLQLDELLSTADPGLGTQPS*PVVGSL
Trigger: CAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCC...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CACCGCAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGGAGCTCCTGGCACTTaGGGCGGATGGAGTCTACCG +
Preference number: 5 (lower is better)
Translates to: HRSPRQRAGLRRRGRATPGAPGT*GGWSLP
Trigger: CGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTCC...AGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTGCGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS TCA 90 bp ATCTGGCCTCGAGCGCCCTGCAGTTCCCCGGCGCCTCCTGGGCAGTaGCCACAGCCGCCGCAGGGTTCCCCGGGATGCTCCCTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: IWPRAPCSSPAPPGQ*PQPPQGSPGCSLLG
Trigger: GCCGAGAAGGGAGCATCCCGGGGAACCCTGCGGCGGCTGTGGTCACTGCCCAGGAGGCGCCGGGGAACTGCAGGGCGCTCGAGGCCAGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS GCA 90 bp GGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCGGGCTCGACTCTGAGCTGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: GRRRGPGRPRCSWTS*SARPTPGSTLSCSG
Trigger: GCCTGAGCAGCTCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000469415.1
ENST00000488765.1
ENST00000535094.7
CDS GCA 90 bp CCCCCGGCACAGCGGCACCGAACCGGAAGGCTGAGACCATGCAGGTaGCGCGGTGGAGATGGGCTCCCATCGGCCACGCAGCTCCCAGCG +
Preference number: 5 (lower is better)
Translates to: PPAQRHRTGRLRPCR*RGGDGLPSATQLPA
Trigger: CGCTGGGAGCTGCGTGGCCGATGGGAGCCCATCTCCACCGCGGCACCTGCATGGTCTCAGCCTTCCGGTTCGGTGCCGCTGTGCCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 90 bp CCCCCGACCCGGCTCCCGGAACGCCCTTCCCGGGCACACAAAGGATaGCGCAGCACCAGCACCATCTTGGCCGCGAAGCGGGGACGCCAC +
Preference number: 5 (lower is better)
Translates to: PPTRLPERPSRAHKG*RSTSTILAAKRGRH
Trigger: GTGGCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGCTGCGCCATCCTTTGTGTGCCCGGGAAGGGCGTTCCGGGAGCCGGGTCGGGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000486210.1
CDS-3UTR CAA 90 bp ACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACCCTGGAACCAGCTTCTaGGGGCCCAACCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: TLRGDQAGTGFGVGSAGHPGTSF*GPNPPS
Trigger: GGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAGG...GTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTGCCGCTGCATGGGCTaGAACCTGGCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RLSQGGPKAAPGCTLGRGCRCMG*NLASSF
Trigger: GAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCA...GCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp TGCCTGCGCCCAGGCTTTGCGGCACAGACCGGCCTCTGCGGACCAGGGATGCCCGCCTGCGCCCAGGCTTaGCGGCACAGACCGGCCTCT +
Preference number: 5 (lower is better)
Translates to: CLRPGFAAQTGLCGPGMPACAQA*RHRPAS
Trigger: AGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGC...GGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS GCA 90 bp GAGGGGCCGGGCGCAGGGCAGAGCCCCGGGTGGCACTTACTGCGATaGGCAGGACGGACGCCTTCACGGAGGTCCATTTGTCCCGTCGCC +
Preference number: 5 (lower is better)
Translates to: EGPGAGQSPGWHLLR*AGRTPSRRSICPVA
Trigger: GGCGACGGGACAAATGGACCTCCGTGAAGGCGTCCGTCCTGCGCATCGCAGTAAGTGCCACCCGGGGCTCTGCCCTGCGCCCGGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp GGGCACCGCATCACGCAGCGTCTTCCCGGCCCTGCGAGGCATTGCTaGTGGCCCCATAGCTTCCGAGGGCCGGCACTGGCTCCCAGGCTC +
Preference number: 5 (lower is better)
Translates to: GHRITQRLPGPARHC*WPHSFRGPALAPRL
Trigger: GAGCCTGGGAGCCAGTGCCGGCCCTCGGAAGCTATGGGGCCAGCAGCAATGCCTCGCAGGGCCGGGAAGACGCTGCGTGATGCGGTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487354.1
CDS GCA 90 bp GACGGGCACCGCATCACGCAGCGTCTTCCCGGCCCTGCGAGGCATTaGTGCTGGCCCCATAGCTTCCGAGGGCCGGCACTGGCTCCCAGG +
Preference number: 5 (lower is better)
Translates to: DGHRITQRLPGPARH*CWPHSFRGPALAPR
Trigger: CCTGGGAGCCAGTGCCGGCCCTCGGAAGCTATGGGGCCAGCAGCAATGCCTCGCAGGGCCGGGAAGACGCTGCGTGATGCGGTGCCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487354.1
CDS-3UTR CAA 90 bp AGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCTGCTCCTCTGCACTaGACCAGCCCCCGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: RRGRASASALPGTHGAASSAPLH*TSPRRP
Trigger: AGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGA...GGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCC +
Preference number: 5 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTLQLDE*LSTADP
Trigger: GGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCC +
Preference number: 5 (lower is better)
Translates to: RQKQHGGARTRCRCPAPALQLDE*LSTADP
Trigger: GGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTCCCTGACGTACCTGCAAGGGGCGAGGGTCAGCGGCAGCCACGTGCGGGGCAGCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCC +
Preference number: 5 (lower is better)
Translates to: VPDVPARGEGQRQPRAGQLQLDE*LSTADP
Trigger: GGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG...CTGCCCCGCACGTGGCTGCCGCTGACCCTCGCCCCTTGCAGGTACGTCAGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp GATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGGCGTCCAAGATGGCTTaGACCTCCCGGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: DAEAGPAVAGRAQGGSGLASKMA*TSRKPC
Trigger: GCAGGGCTTCCGGGAGGTCAAAGCCATCTTGGACGC...CAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTTGCAGCTCCAGGGACTaGCTGAGCAGCCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLCSSRD*LSSPLL
Trigger: GAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCA...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCTTGGTGTGGCCCCTCTaGTGGTCGGTCCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: RLCGEIRRGRASASALPGLVWPL*WSVQTL
Trigger: CAGCGTCTGGACCGACCACAAGAGGGGCCACACCAA...GCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCTGCCGCTGCATGGGCTaGAACCTGGCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPCRCMG*NLASSF
Trigger: GAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCA...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCTCCTCGCCCGGGCCCTaGGCAGCGTCACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SEAGAGLSELWSAALVHASSPGP*AASRVG
Trigger: GCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGA...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS GCA 90 bp GAGGGACTGGTGCTGGTCGGGGCCGGCAGGGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGGCTGGCTTCTCTACAAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: EGLVLVGAGRGRLCD*SSARCWLASLQACS
Trigger: GCTGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCCCCTGCCGGCCCCGACCAGCACCAGTCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000261963.11
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000439475.1
ENST00000453297.5
ENST00000535094.7
CDS CCA 90 bp GCACCAGCACCATCTTGGCCGCGAAGCGGGGACGCCACACCTTCCTaGGTTTGCTGGGCAGACCTGGCCTCTGCAGGGCAGCCAGCCGGC +
Preference number: 5 (lower is better)
Translates to: APAPSWPRSGDATPS*VCWADLASAGQPAG
Trigger: GCCGGCTGGCTGCCCTGCAGAGGCCAGGTCTGCCCAGCAAACCCAGGAAGGTGTGGCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS CCA 90 bp TGGGAGCTCCTGGCCACGACCAGCTCCGGGGAAGGGCTCCAGCCTTaGGAGGAGGCTACGCCGCAGGGCATGACTACCGCAGCGGCGATG +
Preference number: 5 (lower is better)
Translates to: WELLATTSSGEGLQP*EEATPQGMTTAAAM
Trigger: CATCGCCGCTGCGGTAGTCATGCCCTGCGGCGTAGCCTCCTCCCAAGGCTGGAGCCCTTCCCCGGAGCTGGTCGTGGCCAGGAGCTCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS-3UTR CAA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCCTGGAACCAGCTTCTaGGGGCCCAACCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRPGTSF*GPNPPS
Trigger: GGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAGG...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGCACACCTTCCTGGGTTaGCTGGGCAGACCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: HRNPMRRRVRLSQGGPKAHTFLG*LGRPGL
Trigger: GAGGCCAGGTCTGCCCAGCAAACCCAGGAAGGTGTG...CGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGGGACGAGCTGCAGGTTaGCCGGGAAAGATGCTGCGA +
Preference number: 5 (lower is better)
Translates to: DAEAGPAVAGRAQGGSGLGRAAG*PGKMLR
Trigger: TCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTCC...CAACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACGCGTCCAAGATGGCTTaGACCTCCCGGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PPSLQLDELLSTADPGLDASKMA*TSRKPC
Trigger: GCAGGGCTTCCGGGAGGTCAAAGCCATCTTGGACGC...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGAGCTCCTGGCACTTaGGGCGGATGGAGTCTACCG +
Preference number: 5 (lower is better)
Translates to: WPPSLQLDELLSTADPGLGAPGT*GGWSLP
Trigger: CGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTCC...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AAGGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGCAGCTCCAGGGACTaGCTGAGCAGCCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: KAAPGCTLGRGSFWGWPCCSSRD*LSSPLL
Trigger: GAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCA...GCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGTGCAGCTCCAGGGACTaGCTGAGCAGCCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARCSSRD*LSSPLL
Trigger: GAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCA...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGTGCAGCTCCAGGGACTaGCTGAGCAGCCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRCSSRD*LSSPLL
Trigger: GAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCA...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGTCCTCGCCCGGGCCCTaGGCAGCGTCACGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: CLYGEGHTRARSCATRRRSSPGP*AASRVG
Trigger: GCCCACCCGTGACGCTGCCAAGGGCCCGGGCGAGGA...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS GCA 90 bp ACGGAAATCCGGACAGCCTTTCCGTCCCCCATGGCGAGGATCAGCTaGCGGGGAGGACGCGCGCTGCCCTGGGCTCGCCACAACCCTCTC +
Preference number: 5 (lower is better)
Translates to: TEIRTAFPSPMARIS*RGGRALPWARHNPL
Trigger: GAGAGGGTTGTGGCGAGCCCAGGGCAGCGCGCGTCCTCCCCGGCAGCTGATCCTCGCCATGGGGGACGGAAAGGCTGTCCGGATTTCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS CCA 90 bp CCGGCTGCACGGGCCGCGTCTGCCTGGCCGCCAGCTTCTTCAGGCTaGCCTGCCTGCGGTGGAACACCTCCTCCATGCTTGCCTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PAARAASAWPPASSG*PACGGTPPPCLPAS
Trigger: AGAAGCAGGCAAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCAGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 90 bp TGTTGGGCGGGAGGGGCTCACCGCCTCTGCGACACTGGCGGGCTCTaGTGGGCCCCGCAAAGGCATCACCCTGGACAGGTGACTTGGCTG +
Preference number: 5 (lower is better)
Translates to: CWAGGAHRLCDTGGL*WAPQRHHPGQVTWL
Trigger: CAGCCAAGTCACCTGTCCAGGGTGATGCCTTTGCGGGGCCCACCAGAGCCCGCCAGTGTCGCAGAGGCGGTGAGCCCCTCCCGCCCAACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp GGGAGAGGCCAGAGGCCCCGAGGGCTCTCCCTACCCTTCCACGCCTaGCTTCTCTGCCCTTCCAGAGCCTCCGGGACCTGTCCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: GRGQRPRGLSLPFHA*LLCPSRASGTCPLC
Trigger: GCAAAGGGGACAGGTCCCGGAGGCTCTGGAAGGGCAGAGAAGCCAGGCGTGGAAGGGTAGGGAGAGCCCTCGGGGCCTCTGGCCTCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS-3UTR CAA 90 bp CCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCACCTCCTCGCGCGCGTaGTACCAGATCTCGAACTTC +
Preference number: 5 (lower is better)
Translates to: PGRPRCSWTSCSARPTPGTSSRA*YQISNF
Trigger: GAAGTTCGAGATCTGGTACAACGCGCGCGAGGAGGT...GCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGTCTGCTCCTCTGCACTaGACCAGCCCCCGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGSAPLH*TSPRRP
Trigger: AGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGA...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGGGCACCCAGCCCTCCTaGCCAGTGGTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: FSGSSSTTVRASPESTVQGTQPS*PVVGSL
Trigger: CAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCC...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGGCACCCAGCCCTCCTaGCCAGTGGTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PCPALLRPLARGSSTSPEGTQPS*PVVGSL
Trigger: CAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCC...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGALLRP*ARGSST
Trigger: AGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCTTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPFTEVH*SRRRSI
Trigger: GATAGACCGGCGACGGGACAAATGGACCTCCGTGAA...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp TGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGGACGAGCTGCAGGTTaGCCGGGAAAGATGCTGCGA +
Preference number: 5 (lower is better)
Translates to: WPPSLQLDELLSTADPGLGRAAG*PGKMLR
Trigger: TCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTCC...GAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGGGACGAGCTGCAGGTTaGCCGGGAAAGATGCTGCGA +
Preference number: 5 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGGRAAG*PGKMLR
Trigger: TCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTCC...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp CCGGGCACACACGGGGCAGCTTCCTCGCCCGGGCCCTTGGCAGCGTCACGGGTGGTCGACTGGACGTCATaGGGCAGCTCTGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: PGTHGAASSPGPLAASRVVDWTS*GSSVSA
Trigger: GGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGAC...CACCCGTGACGCTGCCAAGGGCCCGGGCGAGGAAGCTGCCCCGTGTGTGCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp GGCGGCTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGTGCACGGTGGCCTGGTaGTCAAGCTGGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: GGSGLHARPRLLLGLALLCTVAW*SSWSWF
Trigger: GAACCAGGACCAGCTTGACAACCAGGCCACCGTGCA...CAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCGCAGCCCCCTCCTCCTaGCGATCTCCGCAGAGAACT +
Preference number: 5 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGAAPSS*RSPQRT
Trigger: AGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTGC...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACATGCAGCTCCAGGGACTaGCTGAGCAGCCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GHTRARSCATRRRHRACTCSSRD*LSSPLL
Trigger: GAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCA...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGCCCTGCATCAGCAGCTaGCCCAGGTCGCCGAGATTC +
Preference number: 5 (lower is better)
Translates to: AAAGRVAQHGRPRARLCGPCISS*PRSPRF
Trigger: GAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGGG...CCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGTTGGTGTGGCCCCTCTaGTGGTCGGTCCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRLVWPL*WSVQTL
Trigger: CAGCGTCTGGACCGACCACAAGAGGGGCCACACCAA...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS TCA 90 bp TGGCAAGAGAGTAGCCCCCGGCACAGCGGCACCGAACCGGAAGGCTaGGACCATGCAGGTGCCGCGGTGGAGATGGGCTCCCATCGGCCA +
Preference number: 5 (lower is better)
Translates to: WQESSPRHSGTEPEG*DHAGAAVEMGSHRP
Trigger: TGGCCGATGGGAGCCCATCTCCACCGCGGCACCTGCATGGTCTCAGCCTTCCGGTTCGGTGCCGCTGTGCCGGGGGCTACTCTCTTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS TCA 90 bp AACCGGAGAGAGAGTGTGAAGGACGGAGGGAGGCGGCGAGGAGGCTaGCCCGCGCTCGTGCTGGAAGGGGACACCGACGTTGTGGCCCCT +
Preference number: 5 (lower is better)
Translates to: NRRESVKDGGRRRGG*PALVLEGDTDVVAP
Trigger: AGGGGCCACAACGTCGGTGTCCCCTTCCAGCACGAGCGCGGGTCAGCCTCCTCGCCGCCTCCCTCCGTCCTTCACACTCTCTCTCCGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491028.1
CDS GCA 90 bp CTCCTCAGAGTGCCCGGCCTCCCAGAGCCTGGCCCGAGCCACCACTaGCCTGCACGCCTGGAAGAGCAGGCAGACAATGCCGAGGTGCTA +
Preference number: 5 (lower is better)
Translates to: LLRVPGLPEPGPSHH*PARLEEQADNAEVL
Trigger: TAGCACCTCGGCATTGTCTGCCTGCTCTTCCAGGCGTGCAGGGCAGTGGTGGCTCGGGCCAGGCTCTGGGAGGCCGGGCACTCTGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS GCA 90 bp GGCAGCTGTTCCTACAGAGTGGGGAGATTCACAGCCTCCTGGTGCTaGGTGTGGTGGGCTGCGGAGGGGTGCTGCCGGCTGCAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GSCSYRVGRFTASWC*VWWAAEGCCRLQGL
Trigger: CAGGCCCTGCAGCCGGCAGCACCCCTCCGCAGCCCACCACACGCAGCACCAGGAGGCTGTGAATCTCCCCACTCTGTAGGAACAGCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS GCA 90 bp AGCGGCAGCTGTTCCTACAGAGTGGGGAGATTCACAGCCTCCTGGTaGTGCGTGTGGTGGGCTGCGGAGGGGTGCTGCCGGCTGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SGSCSYRVGRFTASW*CVWWAAEGCCRLQG
Trigger: GCCCTGCAGCCGGCAGCACCCCTCCGCAGCCCACCACACGCAGCACCAGGAGGCTGTGAATCTCCCCACTCTGTAGGAACAGCTGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp ACAGCGGCACCGAACCGGAAGGCTGAGACCATGCAGGTGCCGCGGTaGAGATGGGCTCCCATCGGCCACGCAGCTCCCAGCGGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: TAAPNRKAETMQVPR*RWAPIGHAAPSGRR
Trigger: TCTTCTCCCGCTGGGAGCTGCGTGGCCGATGGGAGCCCATCTCCACCGCGGCACCTGCATGGTCTCAGCCTTCCGGTTCGGTGCCGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 90 bp CCCTTCTCGTGGTCCGCCACGACCGTGTATTTACCTGGAACCTGGTaGGAGACGGGCAGGGGCACAGACAGCGTCAGCACCCGCCCCGGC +
Preference number: 5 (lower is better)
Translates to: PFSWSATTVYLPGTW*ETGRGTDSVSTRPG
Trigger: GCCGGGGCGGGTGCTGACGCTGTCTGTGCCCCTGCCCGTCTCCCACCAGGTTCCAGGTAAATACACGGTCGTGGCGGACCACGAGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS-3UTR CAA 90 bp GCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCACCTCCTCGCGCGCGTaGTACCAGATCTCGAACTTC +
Preference number: 5 (lower is better)
Translates to: ASQPDAEAGPAVAGRAQGTSSRA*YQISNF
Trigger: GAAGTTCGAGATCTGGTACAACGCGCGCGAGGAGGT...GCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCACCTCCTCGCGCGCGTaGTACCAGATCTCGAACTTC +
Preference number: 5 (lower is better)
Translates to: GSTLRGDQAGTGFGVGSATSSRA*YQISNF
Trigger: GAAGTTCGAGATCTGGTACAACGCGCGCGAGGAGGT...GGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAACCTCCTCGCGCGCGTaGTACCAGATCTCGAACTTC +
Preference number: 5 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSATSSRA*YQISNF
Trigger: GAAGTTCGAGATCTGGTACAACGCGCGCGAGGAGGT...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTTCCTTGAGTTTCCTCTaGAGGGACTGGTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPSLSFL*RDWCWS
Trigger: CGACCAGCACCAGTCCCTCAAGAGGAAACTCAAGGA...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCCTGGAACCAGCTTCTaGGGGCCCAACCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVPGTSF*GPNPPS
Trigger: GGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAGG...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCC +
Preference number: 5 (lower is better)
Translates to: ETPCPALLRPLARGSSTSLQLDE*LSTADP
Trigger: GGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAACTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCC +
Preference number: 5 (lower is better)
Translates to: PCPALLRPLARGSSTSPELQLDE*LSTADP
Trigger: GGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGAGCAATGAGCACCAGCACCATCTaGGCCGCGAAGCGGGGACGC +
Preference number: 5 (lower is better)
Translates to: RPRLLLGLALLMQGCRAMSTSTI*AAKRGR
Trigger: GCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGCT...CATTGCTCTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp CGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTCACACAGCACTGAGCTaGTCGACTGGACGTCATTGG +
Preference number: 5 (lower is better)
Translates to: RCGGGSGCRREGPRRLRVHTALS*STGRHW
Trigger: CCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTG...AACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp AGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCCACACAGCACTGAGCTaGTCGACTGGACGTCATTGG +
Preference number: 5 (lower is better)
Translates to: RRGRASASALPGTHGAASHTALS*STGRHW
Trigger: CCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTG...GGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp CTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGTGCACGGTGGCCTGGTaGTCAAGCTGGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: LQLDELLSTADPGLDSAGCTVAW*SSWSWF
Trigger: GAACCAGGACCAGCTTGACAACCAGGCCACCGTGCA...CCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGGCGTCCAAGATGGCTTaGACCTCCCGGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRASKMA*TSRKPC
Trigger: GCAGGGCTTCCGGGAGGTCAAAGCCATCTTGGACGC...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp GGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTACATGCGCCAGGCTGTaGCCGATGTCTGTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: GGDGLRRRLCRAHTGQLPTCARL*PMSVKV
Trigger: AACCTTCACAGACATCGGCAACAGCCTGGCGCATGT...AGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCACATGCGCCAGGCTGTaGCCGATGTCTGTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRTCARL*PMSVKV
Trigger: AACCTTCACAGACATCGGCAACAGCCTGGCGCATGT...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGGGAGCTCCTGGCACTTaGGGCGGATGGAGTCTACCG +
Preference number: 5 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQGAPGT*GGWSLP
Trigger: CGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTCC...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCTCCTGGGACTGGCACTaGTCCACAGGTTGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGSWDWH*STGCEA
Trigger: GGCCTCACAACCTGTGGACAAGTGCCAGTCCCAGGA...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGAGTCCAGGCTCAGCTaGTGGTCCAGCTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: ASQPDAEAGPAVAGRAQGESRLS*WSSFLW
Trigger: CCAGAGAAAGCTGGACCACAAGCTGAGCCTGGACTC...GCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp CTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACAGAGTCCAGGCTCAGCTaGTGGTCCAGCTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LRGDQAGTGFGVGSAGHTESRLS*WSSFLW
Trigger: CCAGAGAAAGCTGGACCACAAGCTGAGCCTGGACTC...TGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCTGCCGCTGCATGGGCTaGAACCTGGCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSCRCMG*NLASSF
Trigger: GAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCA...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp ACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCGTGCCGCTGCATGGGCTaGAACCTGGCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TSCSARPTPGSTLRGDQACRCMG*NLASSF
Trigger: GAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCA...CGCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACATGCCGCTGCATGGGCTaGAACCTGGCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GHTRARSCATRRRHRACTCRCMG*NLASSF
Trigger: GAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCA...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGCAGGTCTCTAAGCAGTGACTaGTCACGTCTGATCCGATGC +
Preference number: 5 (lower is better)
Translates to: QPQTARGSPAPRPRYPCRSLSSD*SRLIRC
Trigger: GCATCGGATCAGACGTGACAAGTCACTGCTTAGAGA...CCTGCAGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTC +
Preference number: 5 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGRLRCV*NKPDDV
Trigger: GACGTCATCAGGCTTGTTCAAGACACACCGGAGGCG...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS GCA 90 bp GCGGCGGTGCAGCTCCAGGGACTTGCTGAGCAGCCCCCTCCTCCTTaGGATCTCCGCAGAGAACTGGTCACAGAGGTGCCGGAGCTCCTG +
Preference number: 5 (lower is better)
Translates to: AAVQLQGLAEQPPPP*DLRRELVTEVPELL
Trigger: CAGGAGCTCCGGCACCTCTGTGACCAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCACCGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 90 bp CGGGCCGCGTCTGCCTGGCCGCCAGCTTCTTCAGGCTGGCCTGCCTaGGGTGGAACACCTCCTCCATGCTTGCCTGCTTCTGGAAGACCT +
Preference number: 5 (lower is better)
Translates to: RAASAWPPASSGWPA*GGTPPPCLPASGRP
Trigger: AGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 90 bp TGCACGGGCCGCGTCTGCCTGGCCGCCAGCTTCTTCAGGCTGGCCTaGCTGCGGTGGAACACCTCCTCCATGCTTGCCTGCTTCTGGAAG +
Preference number: 5 (lower is better)
Translates to: CTGRVCLAASFFRLA*LRWNTSSMLACFWK
Trigger: CTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 90 bp CACAGTGCCCGGTGCCTCCCACATCTGGCTTCTCACGCCGTTAAGTaGGCGTCTGCCTCACACCCGGCAGTGCAGGCTGACGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: HSARCLPHLASHAVK*ASASHPAVQADAAA
Trigger: GGCTGCAGCGTCAGCCTGCACTGCCGGGTGTGAGGCAGACGCGCACTTAACGGCGTGAGAAGCCAGATGTGGGAGGCACCGGGCACTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp AGCCATGGAGCTTCTGCCCCACACGCGGCCAAGCTCCTGCCTCACTaGCCACAGTGCCCGGTGCCTCCCACATCTGGCTTCTCACGCCGT +
Preference number: 5 (lower is better)
Translates to: SHGASAPHAAKLLPH*PQCPVPPTSGFSRR
Trigger: ACGGCGTGAGAAGCCAGATGTGGGAGGCACCGGGCACTGTGGGCAGTGAGGCAGGAGCTTGGCCGCGTGTGGGGCAGAAGCTCCATGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp GAACCCAGCTGCCCTCCCTCTTGCCCCAGGCGGCGTGGTCAGAGCTaGCTTTGGACTCCAAGCCAGGGAGCTGATCCCGGAGCTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EPSCPPSCPRRRGQS*LWTPSQGADPGALW
Trigger: CCAGAGAGCTCCGGGATCAGCTCCCTGGCTTGGAGTCCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCAGCTGGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp GCAGCGGCGATGGAAGGCGTCTGTGAATCTGTCTTTGGGCCCAGCTaGCCCAGCCCCTCACGCTGGTCTCCACACACAGCTCTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: AAAMEGVCESVFGPS*PSPSRWSPHTALGP
Trigger: GGGGCCGAGAGCTGTGTGTGGAGACCAGCGTGAGGGGCTGGGGCAGCTGGGCCCAAAGACAGATTCACAGACGCCTTCCATCGCCGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp GCCCTTCCCGGGCACACAAAGGATGGCGCAGCACCAGCACCATCTTaGCCGCGAAGCGGGGACGCCACACCTTCCTGGGTTTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: ALPGHTKDGAAPAPS*PRSGDATPSWVCWA
Trigger: TGCCCAGCAAACCCAGGAAGGTGTGGCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGCTGCGCCATCCTTTGTGTGCCCGGGAAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375597.8
ENST00000375604.6
CDS CCA 90 bp GCTGACCCAGGGGCCAAGCCTTCTGCCCCTGGCAACACACGCCTGTaGGGAGTTGAGCCTTTGAGTGCCTGGGAGGCAGCTGCGTCCGCT +
Preference number: 5 (lower is better)
Translates to: ADPGAKPSAPGNTRL*GVEPLSAWEAAASA
Trigger: AGCGGACGCAGCTGCCTCCCAGGCACTCAAAGGCTCAACTCCCCACAGGCGTGTGTTGCCAGGGGCAGAAGGCTTGGCCCCTGGGTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS CCA 90 bp CCTGACGCCCTTGACCTATGGGATACCGAGGGCTGTGGTCCCCACTaGCAAGAGAGTAGCCCCCGGCACAGCGGCACCGAACCGGAAGGC +
Preference number: 5 (lower is better)
Translates to: PDALDLWDTEGCGPH*QESSPRHSGTEPEG
Trigger: GCCTTCCGGTTCGGTGCCGCTGTGCCGGGGGCTACTCTCTTGCCAGTGGGGACCACAGCCCTCGGTATCCCATAGGTCAAGGGCGTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 90 bp CCAGCACCACGTTCCCCCAGTGCCTGGACATCTGCCTCTGCTGCGTaGACATGGTGGGGGCGAGGAGGATGCTTTGTCCCAGGGCAGGGG +
Preference number: 5 (lower is better)
Translates to: PAPRSPSAWTSASAA*TWWGRGGCFVPGQG
Trigger: CCCCTGCCCTGGGACAAAGCATCCTCCTCGCCCCCACCATGTCCACGCAGCAGAGGCAGATGTCCAGGCACTGGGGGAACGTGGTGCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp CTTGGGAGCCCCATGGTCCCCCACCCATGTGGGCAGACAGCCCACTaGCCTGCGGGTGCAACCACAGCTCACTGGACAGGAGCAGAGCGT +
Preference number: 5 (lower is better)
Translates to: LGSPMVPHPCGQTAH*PAGATTAHWTGAER
Trigger: ACGCTCTGCTCCTGTCCAGTGAGCTGTGGTTGCACCCGCAGGCCAGTGGGCTGTCTGCCCACATGGGTGGGGGACCATGGGGCTCCCAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp GACAGAGACCCAAACCACTCAGGGCTCGTGACCTTGGGAGCCCCATaGTCCCCCACCCATGTGGGCAGACAGCCCACTGGCCTGCGGGTG +
Preference number: 5 (lower is better)
Translates to: DRDPNHSGLVTLGAP*SPTHVGRQPTGLRV
Trigger: CACCCGCAGGCCAGTGGGCTGTCTGCCCACATGGGTGGGGGACCATGGGGCTCCCAAGGTCACGAGCCCTGAGTGGTTTGGGTCTCTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp AGCTGCCCTCCCTCTTGCCCCAGGCGGCGTGGTCAGAGCTGCCTTTaGACTCCAAGCCAGGGAGCTGATCCCGGAGCTCTCTGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: SCPPSCPRRRGQSCL*TPSQGADPGALWVP
Trigger: TGGGACCCAGAGAGCTCCGGGATCAGCTCCCTGGCTTGGAGTCCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp GGAAGCGGCAGCTGTTCCTACAGAGTGGGGAGATTCACAGCCTCCTaGTGCTGCGTGTGGTGGGCTGCGGAGGGGTGCTGCCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GSGSCSYRVGRFTAS*CCVWWAAEGCCRLQ
Trigger: CTGCAGCCGGCAGCACCCCTCCGCAGCCCACCACACGCAGCACCAGGAGGCTGTGAATCTCCCCACTCTGTAGGAACAGCTGCCGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp CCTCCCTTCTCGTGGTCCGCCACGACCGTGTATTTACCTGGAACCTaGTGGGAGACGGGCAGGGGCACAGACAGCGTCAGCACCCGCCCC +
Preference number: 5 (lower is better)
Translates to: PPFSWSATTVYLPGT*WETGRGTDSVSTRP
Trigger: GGGGCGGGTGCTGACGCTGTCTGTGCCCCTGCCCGTCTCCCACCAGGTTCCAGGTAAATACACGGTCGTGGCGGACCACGAGAAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp ACGTCCCCGCTCCTCACGCGCAGCGCATCGGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTATTTACCTGGAACCTGGTGGGAGACG +
Preference number: 5 (lower is better)
Translates to: TSPLLTRSASGPPFS*SATTVYLPGTWWET
Trigger: CGTCTCCCACCAGGTTCCAGGTAAATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCCCGATGCGCTGCGCGTGAGGAGCGGGGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp GGGGGAGGTGGTCACCGCGGTGCGTGCAGAACCCGGAGGAAGGAATaGCAGGGCCTCCGCGACTTGTCCCCAGTGCTCAGAAGCAGCAGA +
Preference number: 5 (lower is better)
Translates to: GGGGHRGACRTRRKE*QGLRDLSPVLRSSR
Trigger: TCTGCTGCTTCTGAGCACTGGGGACAAGTCGCGGAGGCCCTGCCATTCCTTCCTCCGGGTTCTGCACGCACCGCGGTGACCACCTCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486806.1
CDS CCA 90 bp TTCCATCTGCACCGAGGGACAGGCACCGCATCACGCAGTGAGGGATaGGCAGCGCATCACGCGGTGAGGGACGGGCACCGCATTACGCGG +
Preference number: 5 (lower is better)
Translates to: FHLHRGTGTASRSEG*AAHHAVRDGHRITR
Trigger: CCGCGTAATGCGGTGCCCGTCCCTCACCGCGTGATGCGCTGCCCATCCCTCACTGCGTGATGCGGTGCCTGTCCCTCGGTGCAGATGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487354.1
CDS-3UTR CAA 90 bp CGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTTTCTCCTCCCTCTTCTaGCAGAAGAGCACTGCCTTC +
Preference number: 5 (lower is better)
Translates to: RCGGGSGCRREGPRRLRVFSSLF*QKSTAF
Trigger: GAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGAA...AACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCTCCTTGAGTTTCCTCTaGAGGGACTGGTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: ASQPDAEAGPAVAGRAQGSLSFL*RDWCWS
Trigger: CGACCAGCACCAGTCCCTCAAGAGGAAACTCAAGGA...GCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTCTGCTCCTCTGCACTaGACCAGCCCCCGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSSAPLH*TSPRRP
Trigger: AGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGCAAAGCGGTTGCTCGGTGCCTGAGCCGCACGCTGGGCCCTGCCCACTGCCGGTTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: SKAVARCLSRTLGPAHCRFTEVH*SRRRSI
Trigger: GATAGACCGGCGACGGGACAAATGGACCTCCGTGAA...CCGGCAGTGGGCAGGGCCCAGCGTGCGGCTCAGGCACCGAGCAACCGCTTTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGAAATCCTCCTTCGCCTaGTCCTTCTTCTCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: TRCGGGSGCRREGPRRLRKSSFA*SFFSVC
Trigger: GCACACAGAGAAGAAGGACAAGGCGAAGGAGGATTT...CCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp CACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACAGCGTCCAAGATGGCTTaGACCTCCCGGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: HKGAQLCDETEAPRLHSTASKMA*TSRKPC
Trigger: GCAGGGCTTCCGGGAGGTCAAAGCCATCTTGGACGC...TGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCGGAGCTCCTGGCACTTaGGGCGGATGGAGTCTACCG +
Preference number: 5 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSGAPGT*GGWSLP
Trigger: CGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTCC...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGTCCTGGGACTGGCACTaGTCCACAGGTTGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: ARSAEAPSGAGLADAGVQSWDWH*STGCEA
Trigger: GGCCTCACAACCTGTGGACAAGTGCCAGTCCCAGGA...CTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCTCCTGGGACTGGCACTaGTCCACAGGTTGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSSWDWH*STGCEA
Trigger: GGCCTCACAACCTGTGGACAAGTGCCAGTCCCAGGA...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTTGTTGTGAAGGCCTGTaGACAGGAGGTGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: RCGGGSGCRREGPRRLRVCCEGL*TGGEPS
Trigger: TGATGGCTCACCTCCTGTCAACAGGCCTTCACAACA...AACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGGAGTCCAGGCTCAGCTaGTGGTCCAGCTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPESRLS*WSSFLW
Trigger: CCAGAGAAAGCTGGACCACAAGCTGAGCCTGGACTC...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS GCA 90 bp TTGGGGCCCAACCCGCCGTCCTCCTCTGCGTCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAGCCCCCGTCGTCCTCAGGTGCCTCC +
Preference number: 5 (lower is better)
Translates to: LGPNPPSSSASDELI*SSALDQPPSSSGAS
Trigger: GGAGGCACCTGAGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGGTTGGGCCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000420013.5
ENST00000421756.5
ENST00000441756.1
ENST00000453297.5
ENST00000469415.1
ENST00000491028.1
ENST00000535094.7
CDS GCA 90 bp TGGATGTGCCAGGCCACGGAGATGGAACCCAGCTGCCCTCCCTCTTaGCCCAGGCGGCGTGGTCAGAGCTGCCTTTGGACTCCAAGCCAG +
Preference number: 5 (lower is better)
Translates to: WMCQATEMEPSCPPS*PRRRGQSCLWTPSQ
Trigger: CTGGCTTGGAGTCCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp ACGTCCCCGCTCCTCACGCGCAGCGCATCGGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTATTTACCTGGAACCAGCTTCTTGGGG +
Preference number: 5 (lower is better)
Translates to: TSPLLTRSASGPPFS*SATTVYLPGTSFLG
Trigger: CCCCAAGAAGCTGGTTCCAGGTAAATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCCCGATGCGCTGCGCGTGAGGAGCGGGGACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000420013.5
ENST00000421756.5
ENST00000453297.5
ENST00000469415.1
ENST00000535094.7
CDS CCA 90 bp TCTGCGGAGGCAGGGCGGTGCAGTGCCCGGGGGAGGGGTCCGGACTaGAGCTGTGGACTAGGAATCATCACACTCAGGTGGGTCACAAGC +
Preference number: 5 (lower is better)
Translates to: SAEAGRCSARGRGPD*SCGLGIITLRWVTS
Trigger: GCTTGTGACCCACCTGAGTGTGATGATTCCTAGTCCACAGCTCCAGTCCGGACCCCTCCCCCGGGCACTGCACCGCCCTGCCTCCGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS CCA 90 bp GCGGGTGCAACCACAGCTCACTGGACAGGAGCAGAGCGTGAGGGATaGTCTGCAAGCAGAGGCTGGCTCCTCTCTACCAGTGGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: AGATTAHWTGAEREG*SASRGWLLSTSGAG
Trigger: CCCCGCCCCACTGGTAGAGAGGAGCCAGCCTCTGCTTGCAGACCATCCCTCACGCTCTGCTCCTGTCCAGTGAGCTGTGGTTGCACCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTTTCTCCTCCCTCTTCTaGCAGAAGAGCACTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLFSSLF*QKSTAF
Trigger: GAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGAA...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCTTCTCCTCCCTCTTCTaGCAGAAGAGCACTGCCTTC +
Preference number: 5 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCFSSLF*QKSTAF
Trigger: GAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGAA...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCTCCTTGAGTTTCCTCTaGAGGGACTGGTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGSLSFL*RDWCWS
Trigger: CGACCAGCACCAGTCCCTCAAGAGGAAACTCAAGGA...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCAGTGAGTGGGACGTTTaGCTCCAACCTTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRSEWDV*LQPLPF
Trigger: AAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCACT...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCAGTGAGTGGGACGTTTaGCTCCAACCTTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLSEWDV*LQPLPF
Trigger: AAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCACT...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCTCTGCTCCTCTGCACTaGACCAGCCCCCGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVSAPLH*TSPRRP
Trigger: AGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGA...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCTGCTCCTCTGCACTaGACCAGCCCCCGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSSAPLH*TSPRRP
Trigger: AGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGA...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCAGTGACGGCTACAAGCCGCTGGGAGGGTAGCGTGAGGGGAATGCAGCCACGCGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: PVTATSRWEGSVRGMQPRALLRP*ARGSST
Trigger: AGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC...GCGTGGCTGCATTCCCCTCACGCTACCCTCCCAGCGGCTTGTAGCCGTCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: PRSPQAVGQRILHFSGSSALLRP*ARGSST
Trigger: AGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC...GCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGCTGCATGCTTCCTATTaGATTCCGCACCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: GARGEWSGGAASEEAAVQLHASY*IPHPGG
Trigger: ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAG...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCTGCATGCTTCCTATTaGATTCCGCACCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: STLRGDQAGTGFGVGSAGLHASY*IPHPGG
Trigger: ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAG...CCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGGGACGAGCTGCAGGTTaGCCGGGAAAGATGCTGCGA +
Preference number: 5 (lower is better)
Translates to: SGSSSTTVRASPESTVQRGRAAG*PGKMLR
Trigger: TCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTCC...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGGTCGACTGGACGTCATaGGGCAGCTCTGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: GRVAQHGRPRARLCGEIRVDWTS*GSSVSA
Trigger: GGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGAC...CCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCACATGCGCCAGGCTGTaGCCGATGTCTGTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGTCARL*PMSVKV
Trigger: AACCTTCACAGACATCGGCAACAGCCTGGCGCATGT...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTCCTGGGACTGGCACTaGTCCACAGGTTGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSSWDWH*STGCEA
Trigger: GGCCTCACAACCTGTGGACAAGTGCCAGTCCCAGGA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCACACCTCCTCCATGCTaGCCTGCTTCTGGAAGACCT +
Preference number: 5 (lower is better)
Translates to: ALAAAGRVAQHGRPRARLTPPPC*PASGRP
Trigger: AGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGT...GAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCTGTTGTGAAGGCCTGTaGACAGGAGGTGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCCCEGL*TGGEPS
Trigger: TGATGGCTCACCTCCTGTCAACAGGCCTTCACAACA...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTTGTTGTGAAGGCCTGTaGACAGGAGGTGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLCCEGL*TGGEPS
Trigger: TGATGGCTCACCTCCTGTCAACAGGCCTTCACAACA...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTGTTGTGAAGGCCTGTaGACAGGAGGTGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: PPSLQLDELLSTADPGLDCCEGL*TGGEPS
Trigger: TGATGGCTCACCTCCTGTCAACAGGCCTTCACAACA...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp CGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGGGGTGCAGAGCAATGCCCTGCATCAGCAGCTaGCCCAGGTCGCCGAGATTC +
Preference number: 5 (lower is better)
Translates to: RPRLLLGLALLMQGCRAMPCISS*PRSPRF
Trigger: GAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGGG...CATTGCTCTGCACCCCTGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGTTGGTGTGGCCCCTCTaGTGGTCGGTCCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: FSGSSSTTVRASPESTVQLVWPL*WSVQTL
Trigger: CAGCGTCTGGACCGACCACAAGAGGGGCCACACCAA...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CAGCCCCAGACAGCGCGCGGGTCTCCGGCGCCGAGGCCGCGCTACCCCTGCAGGTGCCGACTGCCAACTTaGCTGTGTTTTGAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: QPQTARGSPAPRPRYPCRCRLPT*LCFELY
Trigger: ATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGCA...CCTGCAGGGGTAGCGCGGCCTCGGCGCCGGAGACCCGCGCGCTGTCTGGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACGGCCTCATTGGGCCGTaGTGGGGAAGAATAACTGTT +
Preference number: 5 (lower is better)
Translates to: PPSLQLDELLSTADPGLDGLIGP*WGRITV
Trigger: AACAGTTATTCTTCCCCACAACGGCCCAATGAGGCC...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CAA 90 bp CGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGAGTGAGTGGGACGTTTaGCTCCAACCTCGCACACCA +
Preference number: 5 (lower is better)
Translates to: RRRGPGRPRCSWTSCSARSEWDV*LQPRTP
Trigger: TGGTGTGCGAGGTTGGAGCAAAACGTCCCACTCACT...CCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397017.6
CDS-3UTR CAA 90 bp GATCCGCCGCGGCGAGGGGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCGGCTCAGGGACAGGCTaGCACCAAAACGATGAAGGT +
Preference number: 5 (lower is better)
Translates to: DPPRRGAERCRGGARRCLGSGTG*HQNDEG
Trigger: ACCTTCATCGTTTTGGTGCAAGCCTGTCCCTGAGCC...GAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCCCCTCGCCGCGGCGGATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS TCA 90 bp GCTCGGTCCCGAAGGACTGCAGCATCTGAGCCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGGCCGTGCGCTGGCACAGCCACCGGG +
Preference number: 5 (lower is better)
Translates to: ARSRRTAASEPSASP*GRNFRWPCAGTATG
Trigger: CCCGGTGGCTGTGCCAGCGCACGGCCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTTCGGGACCGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000535094.7
CDS GCA 90 bp CAGGCTGACGCTGCAGCCACGAAAAAGGCGCCCGATGCCACTGGATaGCGCCCGGCCTGCCTGTGTGGGGCTTCCACTCACTCTACGTTT +
Preference number: 5 (lower is better)
Translates to: QADAAATKKAPDATG*RPACLCGASTHSTF
Trigger: AAACGTAGAGTGAGTGGAAGCCCCACACAGGCAGGCCGGGCGGCATCCAGTGGCATCGGGCGCCTTTTTCGTGGCTGCAGCGTCAGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp TGGCTTCTCACGCCGTTAAGTGCGCGTCTGCCTCACACCCGGCAGTaGAGGCTGACGCTGCAGCCACGAAAAAGGCGCCCGATGCCACTG +
Preference number: 5 (lower is better)
Translates to: WLLTPLSARLPHTRQ*RLTLQPRKRRPMPL
Trigger: CAGTGGCATCGGGCGCCTTTTTCGTGGCTGCAGCGTCAGCCTGCACTGCCGGGTGTGAGGCAGACGCGCACTTAACGGCGTGAGAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp ACAAAGGGACCTTGGATGTGCCAGGCCACGGAGATGGAACCCAGCTaGCCTCCCTCTTGCCCCAGGCGGCGTGGTCAGAGCTGCCTTTGG +
Preference number: 5 (lower is better)
Translates to: TKGPWMCQATEMEPS*PPSCPRRRGQSCLW
Trigger: CCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCAAGGTCCCTTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp TCCTTGGTACTCCCCGACTCGCCCGTCCTCTGCCCTCCCTCTCCCTaGAGCTGTCCTGCCCAACCTCCCCAAGCCTCACTCCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: SLVLPDSPVLCPPSP*SCPAQPPQASLLFL
Trigger: GAGAAAGAGGAGTGAGGCTTGGGGAGGTTGGGCAGGACAGCTGCAGGGAGAGGGAGGGCAGAGGACGGGCGAGTCGGGGAGTACCAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp CCCACATCTGTTCTCACGCCCAGGCCTTCCTTCATGCTGTCTCTGTaGGAGAGGCCAGAGGCCCCGAGGGCTCTCCCTACCCTTCCACGC +
Preference number: 5 (lower is better)
Translates to: PTSVLTPRPSFMLSL*ERPEAPRALPTLPR
Trigger: GCGTGGAAGGGTAGGGAGAGCCCTCGGGGCCTCTGGCCTCTCCCACAGAGACAGCATGAAGGAAGGCCTGGGCGTGAGAACAGATGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS-3UTR CAA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCACCTCCTCGCGCGCGTaGTACCAGATCTCGAACTTC +
Preference number: 5 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSTSSRA*YQISNF
Trigger: GAAGTTCGAGATCTGGTACAACGCGCGCGAGGAGGT...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGTCCTTGAGTTTCCTCTaGAGGGACTGGTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLSLSFL*RDWCWS
Trigger: CGACCAGCACCAGTCCCTCAAGAGGAAACTCAAGGA...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGGGCACCCAGCCCTCCTaGCCAGTGGTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDEGTQPS*PVVGSL
Trigger: CAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCC...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCACATTCTGGAACTCCTaGTCCGGAATCTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GLDSAGRSGGDGLRRRLCTFWNS*SGISLK
Trigger: CTTCAGCGAGATTCCGGACAAGGAGTTCCAGAATGT...GCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACAAATCCTCCTTCGCCTaGTCCTTCTTCTCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: PPSLQLDELLSTADPGLDKSSFA*SFFSVC
Trigger: GCACACAGAGAAGAAGGACAAGGCGAAGGAGGATTT...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp TTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGTGCACGGTGGCCTGGTaGTCAAGCTGGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: FSGSSSTTVRASPESTVQCTVAW*SSWSWF
Trigger: GAACCAGGACCAGCTTGACAACCAGGCCACCGTGCA...CTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCGGCTCCGGGTTGTGCTCCATGAGATCTaGGTTGAGGATGGATTCGTA +
Preference number: 5 (lower is better)
Translates to: RCGGGSGCRREGPRRLRVVLHEI*VEDGFV
Trigger: TACGAATCCATCCTCAACCAAGATCTCATGGAGCAC...AACCCGGAGCCGCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGACACCTCCTCCATGCTaGCCTGCTTCTGGAAGACCT +
Preference number: 5 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTTPPPC*PASGRP
Trigger: AGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGT...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCCCCTGCATCAGCAGCTaGCCCAGGTCGCCGAGATTC +
Preference number: 5 (lower is better)
Translates to: SCATRRRHRACTVHQGHRPCISS*PRSPRF
Trigger: GAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGGG...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAGTACATCAGGGACATCGCTTGGTGTGGCCCCTCTaGTGGTCGGTCCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: SCATRRRHRACTVHQGHRLVWPL*WSVQTL
Trigger: CAGCGTCTGGACCGACCACAAGAGGGGCCACACCAA...GCGATGTCCCTGATGTACTGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGTCCGTTTCCTCCTTTTaGGCCTCATTGGGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: RRGPGRPRCSWTSCSARPSVSSF*ASLGRC
Trigger: ACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGA...CGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CAA 90 bp AGGTTGAGTCAGGGTCAGGAACGGGGATCCGCCGCGGCGAGGGGCAGAGAGGTGTATGGGGCCTCTAATTaGCGATGCGCAGGACGGACG +
Preference number: 5 (lower is better)
Translates to: RLSQGQERGSAAARGREVYGASN*RCAGRT
Trigger: CGTCCGTCCTGCGCATCGCAAATTAGAGGCCCCATA...CACCTCTCTGCCCCTCGCCGCGGCGGATCCCCGTTCCTGACCCTGACTCAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS TCA 90 bp ACTTCATGGACGTCTCCAGGCGGCGGTGCAGCTCCAGGGACTTGCTaGGCAGCCCCCTCCTCCTTGCGATCTCCGCAGAGAACTGGTCAC +
Preference number: 5 (lower is better)
Translates to: TSWTSPGGGAAPGTC*AAPSSLRSPQRTGH
Trigger: GTGACCAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCACCGCCGCCTGGAGACGTCCATGAAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS TCA 90 bp GTGACTCTGGGCTTCGCCAACTCACAAGAAAGAACCCAAGAGGGCTaGGCCACCTCCTCAGAGTGCCCGGCCTCCCAGAGCCTGGCCCGA +
Preference number: 5 (lower is better)
Translates to: VTLGFANSQERTQEG*ATSSECPASQSLAR
Trigger: TCGGGCCAGGCTCTGGGAGGCCGGGCACTCTGAGGAGGTGGCTCAGCCCTCTTGGGTTCTTTCTTGTGAGTTGGCGAAGCCCAGAGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS TCA 90 bp TACGCCAGGCAATTACCCTCCTGGAGGCCGATTCCTGCTCCGCCCTaGTGTTTACATGCAGGTCCAGGCGACACACCGTGCCCGCCCGAG +
Preference number: 5 (lower is better)
Translates to: YARQLPSWRPIPAPP*CLHAGPGDTPCPPE
Trigger: CTCGGGCGGGCACGGTGTGTCGCCTGGACCTGCATGTAAACATCAGGGCGGAGCAGGAATCGGCCTCCAGGAGGGTAATTGCCTGGCGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS TCA 90 bp CTGGCTGCGTCTTCTGTGACAGAGACCCAAACCACTCAGGGCTCGTaGCCTTGGGAGCCCCATGGTCCCCCACCCATGTGGGCAGACAGC +
Preference number: 5 (lower is better)
Translates to: LAASSVTETQTTQGS*PWEPHGPPPMWADS
Trigger: GCTGTCTGCCCACATGGGTGGGGGACCATGGGGCTCCCAAGGTCACGAGCCCTGAGTGGTTTGGGTCTCTGTCACAGAAGACGCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 90 bp CAGGCGGCGTGGTCAGAGCTGCCTTTGGACTCCAAGCCAGGGAGCTaGTCCCGGAGCTCTCTGGGTCCCAGTCCTCCTAGAGTGAAGGAG +
Preference number: 5 (lower is better)
Translates to: QAAWSELPLDSKPGS*SRSSLGPSPPRVKE
Trigger: CTCCTTCACTCTAGGAGGACTGGGACCCAGAGAGCTCCGGGATCAGCTCCCTGGCTTGGAGTCCAAAGGCAGCTCTGACCACGCCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp CGATGCCAGCGTCCTGCAGGATCACGCCGGTCCTGGCATCTGAGGTaGCCGTGCTGGTCCACGTTAAGGATTCACTCGTGGTGGCATGGC +
Preference number: 5 (lower is better)
Translates to: RCQRPAGSRRSWHLR*PCWSTLRIHSWWHG
Trigger: GCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATCCTGCAGGACGCTGGCATCG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397021.5
ENST00000494043.1
CDS CCA 90 bp GCCCCTGGCAACACACGCCTGTGGGGAGTTGAGCCTTTGAGTGCCTaGGAGGCAGCTGCGTCCGCTGTTCTCATCCGTCTGTGGTCACTG +
Preference number: 5 (lower is better)
Translates to: APGNTRLWGVEPLSA*EAAASAVLIRLWSL
Trigger: CAGTGACCACAGACGGATGAGAACAGCGGACGCAGCTGCCTCCCAGGCACTCAAAGGCTCAACTCCCCACAGGCGTGTGTTGCCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS CCA 90 bp GTGCCTTTTCCACAAAGGGACCTTGGATGTGCCAGGCCACGGAGATaGAACCCAGCTGCCCTCCCTCTTGCCCCAGGCGGCGTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: VPFPQRDLGCARPRR*NPAALPLAPGGVVR
Trigger: TCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp TCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGTCCTTGAGTTTCCTCTaGAGGGACTGGTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: SGSSSTTVRASPESTVQRSLSFL*RDWCWS
Trigger: CGACCAGCACCAGTCCCTCAAGAGGAAACTCAAGGA...CCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCGTTTCTGCTGATGCTTaGCCCAGAACTCATCGAAGG +
Preference number: 5 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGVSADA*PRTHRR
Trigger: CCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAAC...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGAGGAGCTCCTGGCACTTaGGGCGGATGGAGTCTACCG +
Preference number: 5 (lower is better)
Translates to: RGCSLPWLCARCPVLESRGAPGT*GGWSLP
Trigger: CGGTAGACTCCATCCGCCCAAAGTGCCAGGAGCTCC...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCCGGGCTCGACTCTGCGGGGAGATCAGGCGGGGACGGGCTTCGGCGTCGGCTCTCCATGAGATCTTGGTaGAGGATGGATTCGTATTCC +
Preference number: 5 (lower is better)
Translates to: PGLDSAGRSGGDGLRRRLSMRSW*RMDSYS
Trigger: GGAATACGAATCCATCCTCAACCAAGATCTCATGGA...GAGCCGACGCCGAAGCCCGTCCCCGCCTGATCTCCCCGCAGAGTCGAGCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCGAGTCCAGGCTCAGCTaGTGGTCCAGCTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SEAGAGLSELWSAALVHAESRLS*WSSFLW
Trigger: CCAGAGAAAGCTGGACCACAAGCTGAGCCTGGACTC...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTGAGACGTTCTGTGTCTaGACAGACAAAGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: RPRCSWTSCSARPTPGSTETFCV*TDKGRW
Trigger: CCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTC...AGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp GGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTCCTCGCACACGCACAACCTTGTaGCTATTTTGTCATCATCGC +
Preference number: 5 (lower is better)
Translates to: GDGLRRRLCRAHTGQLPRTRTTL*LFCHHR
Trigger: GCGATGATGACAAAATAGCAACAAGGTTGTGCGTGT...GCGAGGAAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp TCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGTCCTTTTTGGCCTCATaGGGCCGTTGTGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SEKGAWPPSLQLDELLSTSFLAS*GRCGEE
Trigger: TTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGA...CGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS TCA 90 bp AGCCTTCTGCCCCTGGCAACACACGCCTGTGGGGAGTTGAGCCTTTaGGTGCCTGGGAGGCAGCTGCGTCCGCTGTTCTCATCCGTCTGT +
Preference number: 5 (lower is better)
Translates to: SLLPLATHACGELSL*VPGRQLRPLFSSVC
Trigger: ACAGACGGATGAGAACAGCGGACGCAGCTGCCTCCCAGGCACTCAAAGGCTCAACTCCCCACAGGCGTGTGTTGCCAGGGGCAGAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS GCA 90 bp CAGCGTCCTGCAGGATCACGCCGGTCCTGGCATCTGAGGTGCCCGTaGTGGTCCACGTTAAGGATTCACTCGTGGTGGCATGGCTACGGT +
Preference number: 5 (lower is better)
Translates to: QRPAGSRRSWHLRCP*WSTLRIHSWWHGYG
Trigger: ACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATCCTGCAGGACGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397021.5
ENST00000494043.1
CDS GCA 90 bp CCCGCCTCCCGGAGGGCCCTTCCGTGCTTTCAGGTCTTATTTCCATaGTGCTTTGCTGAGGCCTTCCTTGGTACTCCCCGACTCGCCCGT +
Preference number: 5 (lower is better)
Translates to: PASRRALPCFQVLFP*CFAEAFLGTPRLAR
Trigger: ACGGGCGAGTCGGGGAGTACCAAGGAAGGCCTCAGCAAAGCAGCATGGAAATAAGACCTGAAAGCACGGAAGGGCCCTCCGGGAGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp CGTCCTGCAGGATCACGCCGGTCCTGGCATCTGAGGTGCCCGTGCTaGTCCACGTTAAGGATTCACTCGTGGTGGCATGGCTACGGTGCT +
Preference number: 5 (lower is better)
Translates to: RPAGSRRSWHLRCPC*STLRIHSWWHGYGA
Trigger: AGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATCCTGCAGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397021.5
ENST00000494043.1
CDS CCA 90 bp CTTCGGGTCTCTGCTGCGACAGCTAAAAGCCGGGCGGGTGCCGCATaGTCACAAGAGACAGGTGCTCAGGACCCTGGTGACTCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: LRVSAATAKSRAGAA*SQETGAQDPGDSGL
Trigger: AAGCCCAGAGTCACCAGGGTCCTGAGCACCTGTCTCTTGTGACCATGCGGCACCCGCCCGGCTTTTAGCTGTCGCAGCAGAGACCCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS-3UTR CAA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAAGTGAGTGGGACGTTTaGCTCCAACCTTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: GHTRARSCATRRRHRACTSEWDV*LQPLPF
Trigger: AAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCACT...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGCTATGGTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCC +
Preference number: 5 (lower is better)
Translates to: SYGRQHWSTPHPAETASLLQLDE*LSTADP
Trigger: GGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG...CAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGCACCGCGCCTGCACAACATTCTGGAACTCCTaGTCCGGAATCTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GHTRARSCATRRRHRACTTFWNS*SGISLK
Trigger: CTTCAGCGAGATTCCGGACAAGGAGTTCCAGAATGT...TGTGCAGGCGCGGTGCCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCATTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: CPALLRPLARGSSTSPEAFTEVH*SRRRSI
Trigger: GATAGACCGGCGACGGGACAAATGGACCTCCGTGAA...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCACATGCGCCAGGCTGTaGCCGATGTCTGTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSTCARL*PMSVKV
Trigger: AACCTTCACAGACATCGGCAACAGCCTGGCGCATGT...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCATCGCAACCCGATGCGGAGGCGGGTCCGGCTGTCGCAGGGAGGGCCCAAGGCTATTTCAGCATTTCCTaGAGCAGCAGCTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: ASQPDAEAGPAVAGRAQGYFSIS*SSSWYL
Trigger: CAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAATA...GCCTTGGGCCCTCCCTGCGACAGCCGGACCCGCCTCCGCATCGGGTTGCGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp TCAGGCGGGGACGGGCTTCGGCGTCGGCTCTGCCGGGCACACACGGGGCAGCTTGTCAGACACATCAATTaGGTGATCCGTTTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SGGDGLRRRLCRAHTGQLVRHIN*VIRFLL
Trigger: AAGGAGGAAACGGATCACCAAATTGATGTGTCTGAC...AAGCTGCCCCGTGTGTGCCCGGCAGAGCCGACGCCGAAGCCCGTCCCCGCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CAA 90 bp GATCAACGCCTTAGCCTGGCTTCAACCCATGCTGGGCGGGGAGGCCGGGTCTGTCTACCTGCATCCAAGTaGATAGACCCGCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: DQRLSLASTHAGRGGRVCLPASK*IDPLAA
Trigger: CGCAGCCAGCGGGTCTATCAACTTGGATGCAGGTAG...ACAGACCCGGCCTCCCCGCCCAGCATGGGTTGAAGCCAGGCTAAGGCGTTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp CAGGGCGGTAGCCTGGCTGGATTCTGGATCTGTTCTGGAGGCACAGCCAACAGGTCGAGAGGTCACCGCTaGCTGTTCTGCGAGACGGCG +
Preference number: 5 (lower is better)
Translates to: QGGSLAGFWICSGGTANRSRGHR*LFCETA
Trigger: CGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGA...CCTGTTGGCTGTGCCTCCAGAACAGATCCAGAATCCAGCCAGGCTACCGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp CCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCGACCAGATCTGGGTATaGAATGCCTTCCTGGCTGTA +
Preference number: 5 (lower is better)
Translates to: PGQPYKHGSRGTAHATASDQIWV*NAFLAV
Trigger: TACAGCCAGGAAGGCATTCAATACCCAGATCTGGTC...GGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS TCA 90 bp CCTTCACGGAGGTCCATTTGTCCCGTCGCCGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCTGCAGGATCACGCCGGTCCTGGCAT +
Preference number: 5 (lower is better)
Translates to: PSRRSICPVAGLSPG*IRCQRPAGSRRSWH
Trigger: ATGCCAGGACCGGCGTGATCCTGCAGGACGCTGGCATCGGATTCATCCTGGTGATAGACCGGCGACGGGACAAATGGACCTCCGTGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397021.5
ENST00000423251.1
ENST00000494043.1
CDS GCA 90 bp CGGGATGCTCCCTTCTCGGCCATCGAACCGCCCTGTCACAAAGGCTaGTACAAAGCGGAGGCAGCTCTGGTTCTTCACGCAGGGACCACA +
Preference number: 5 (lower is better)
Translates to: RDAPFSAIEPPCHKG*YKAEAALVLHAGTT
Trigger: TGTGGTCCCTGCGTGAAGAACCAGAGCTGCCTCCGCTTTGTAGCAGCCTTTGTGACAGGGCGGTTCGATGGCCGAGAAGGGAGCATCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS GCA 90 bp ATTACCCTCCTGGAGGCCGATTCCTGCTCCGCCCTGATGTTTACATaGAGGTCCAGGCGACACACCGTGCCCGCCCGAGAGGAACTTGAG +
Preference number: 5 (lower is better)
Translates to: ITLLEADSCSALMFT*RSRRHTVPAREELE
Trigger: CTCAAGTTCCTCTCGGGCGGGCACGGTGTGTCGCCTGGACCTGCATGTAAACATCAGGGCGGAGCAGGAATCGGCCTCCAGGAGGGTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS-3UTR CAA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCTTCTCCTCCCTCTTCTaGCAGAAGAGCACTGCCTTC +
Preference number: 5 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSFSSLF*QKSTAF
Trigger: GAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGAA...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCACACCCAGTGAGTGGGACGTTTaGCTCCAACCTTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: AGAGLSELWSAALVHATPSEWDV*LQPLPF
Trigger: AAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCACT...GGGTGTGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAACCTGGAACCAGCTTCTaGGGGCCCAACCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: CARCPVLESRLPASRELEPGTSF*GPNPPS
Trigger: GGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAGG...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIALLRP*ARGSST
Trigger: AGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 5 (lower is better)
Translates to: GGAWGVEWRCGLRGGCSAIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...TGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 5 (lower is better)
Translates to: GARGEWSGGAASEEAAVQIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: GARGEWSGGAASEEAAVQDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: PPSLQLDELLSTADPGLDDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...GTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGCACACCTTCCTGGGTTaGCTGGGCAGACCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAHTFLG*LGRPGL
Trigger: GAGGCCAGGTCTGCCCAGCAAACCCAGGAAGGTGTG...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR CAA 90 bp GGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCTCATCTCTATTGAATTaGAAAGCGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: GGLAALAAAGRVAQHGRPSSLLN*KAMSER
Trigger: TCTCTCCGACATCGCTTTCAAATTCAATAGAGATGA...GGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375608.7
ENST00000397030.5
CDS-3UTR CAA 90 bp CTCCGGGTTGCACGCTCGGCCGAGGCTCCTTCTGGGGCTGGCCTTGCTGATGCAGTTTCTGCTGATGCTTaGCCCAGAACTCATCGAAGG +
Preference number: 5 (lower is better)
Translates to: LRVARSAEAPSGAGLADAVSADA*PRTHRR
Trigger: CCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAAC...TGCATCAGCAAGGCCAGCCCCAGAAGGAGCCTCGGCCGAGCGTGCAACCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGCGTCCAAGATGGCTTaGACCTCCCGGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIASKMA*TSRKPC
Trigger: GCAGGGCTTCCGGGAGGTCAAAGCCATCTTGGACGC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGGCAGCCCCCTCCTCCTaGCGATCTCCGCAGAGAACT +
Preference number: 5 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAAAPSS*RSPQRT
Trigger: AGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTGC...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTCCATGAGATCTTGGTaGAGGATGGATTCGTATTCC +
Preference number: 5 (lower is better)
Translates to: ALAAAGRVAQHGRPRARLSMRSW*RMDSYS
Trigger: GGAATACGAATCCATCCTCAACCAAGATCTCATGGA...GAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCGTGCTCCATGAGATCTaGGTTGAGGATGGATTCGTA +
Preference number: 5 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSVLHEI*VEDGFV
Trigger: TACGAATCCATCCTCAACCAAGATCTCATGGAGCAC...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTGCGAGACGGCGGTGGGGAGGGATCCTTTTTGGCCTCATaGGGCCGTTGTGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: ASFERSPLAVLRDGGGEGSFLAS*GRCGEE
Trigger: TTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGA...TCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCTGCCGCTTGGCTTTTTaGTCAGGACTGGTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSCRLAF*SGLVGE
Trigger: TTCTCCTACCAGTCCTGACAAAAAAGCCAAGCGGCA...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000453297.5
CDS-3UTR CAA 90 bp GGGGCGCGTGGGGAGTGGAGTGGAGGTGCGGCCTCCGAGGAGGCTGCAGTGCAGATTTCATCCGTGTGCTaGGAAACCGCATTTAATCTC +
Preference number: 5 (lower is better)
Translates to: GARGEWSGGAASEEAAVQISSVC*ETAFNL
Trigger: GAGATTAAATGCGGTTTCCAAGCACACGGATGAAAT...CTGCACTGCAGCCTCCTCGGAGGCCGCACCTCCACTCCACTCCCCACGCGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS TCA 90 bp GGCGGGTGCCGCATGGTCACAAGAGACAGGTGCTCAGGACCCTGGTaGCTCTGGGCTTCGCCAACTCACAAGAAAGAACCCAAGAGGGCT +
Preference number: 5 (lower is better)
Translates to: GGCRMVTRDRCSGPW*LWASPTHKKEPKRA
Trigger: AGCCCTCTTGGGTTCTTTCTTGTGAGTTGGCGAAGCCCAGAGTCACCAGGGTCCTGAGCACCTGTCTCTTGTGACCATGCGGCACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS TCA 90 bp GCTCGGTCCCGAAGGACTGCAGCATCTGAGCCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGGCCAGGCACACTCTACACGTGTGCC +
Preference number: 5 (lower is better)
Translates to: ARSRRTAASEPSASP*GRNFRWPGTLYTCA
Trigger: GGCACACGTGTAGAGTGTGCCTGGCCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTTCGGGACCGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475524.1
CDS TCA 90 bp GAGGGCCCTTCCGTGCTTTCAGGTCTTATTTCCATGCTGCTTTGCTaGGGCCTTCCTTGGTACTCCCCGACTCGCCCGTCCTCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: EGPSVLSGLISMLLC*GLPWYSPTRPSSAL
Trigger: GAGGGCAGAGGACGGGCGAGTCGGGGAGTACCAAGGAAGGCCTCAGCAAAGCAGCATGGAAATAAGACCTGAAAGCACGGAAGGGCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS GCA 90 bp TCGTTCACGGCCTTCAGGATGCCCAGGATGGAGCTCAGCGCCTCCTaGAGGTCCTCAGCCCCCTCGCAGTTCCTGCTGTATTTCAGCATT +
Preference number: 5 (lower is better)
Translates to: SFTAFRMPRMELSAS*RSSAPSQFLLYFSI
Trigger: AATGCTGAAATACAGCAGGAACTGCGAGGGGGCTGAGGACCTGCAGGAGGCGCTGAGCTCCATCCTGGGCATCCTGAAGGCCGTGAACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 90 bp TTCTTGCAGAAGAGCACTGCCTTCTCGTGCAGGAACAGGTGCCGCTaGATGGGCTTGAACCTGGCCAGCTCCTTCACCTTGGTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: FLQKSTAFSCRNRCR*MGLNLASSFTLVWP
Trigger: GGGCCACACCAAGGTGAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 90 bp TCCCCATTCTCCTCCCTCTTCTTGCAGAAGAGCACTGCCTTCTCGTaGAGGAACAGGTGCCGCTGCATGGGCTTGAACCTGGCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SPFSSLFLQKSTAFS*RNRCRCMGLNLASS
Trigger: GGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGAATGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 90 bp TGGGACAGAGTACGCCAGGCAATTACCCTCCTGGAGGCCGATTCCTaGTCCGCCCTGATGTTTACATGCAGGTCCAGGCGACACACCGTG +
Preference number: 5 (lower is better)
Translates to: WDRVRQAITLLEADS*SALMFTCRSRRHTV
Trigger: CACGGTGTGTCGCCTGGACCTGCATGTAAACATCAGGGCGGAGCAGGAATCGGCCTCCAGGAGGGTAATTGCCTGGCGTACTCTGTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS GCA 90 bp GTAACAGGTGCTACACGTGCCTTTTCCACAAAGGGACCTTGGATGTaGCAGGCCACGGAGATGGAACCCAGCTGCCCTCCCTCTTGCCCC +
Preference number: 5 (lower is better)
Translates to: VTGATRAFSTKGPWM*QATEMEPSCPPSCP
Trigger: GGGGCAAGAGGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGCACCTGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp GACGCTGGACCGGGTGAGGAAAACAATGGGCGTGGACCCTGTTCCTaGAGATGTTCAGACACGAGTGCTCAGAATGGCCGCTGCCGTGTG +
Preference number: 5 (lower is better)
Translates to: DAGPGEENNGRGPCS*RCSDTSAQNGRCRV
Trigger: CACACGGCAGCGGCCATTCTGAGCACTCGTGTCTGAACATCTGCAGGAACAGGGTCCACGCCCATTGTTTTCCTCACCCGGTCCAGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494043.1
CDS GCA 90 bp CAGGGCCTTTGCGCCTGCATACCCGCCTCCCGGAGGGCCCTTCCGTaGTTTCAGGTCTTATTTCCATGCTGCTTTGCTGAGGCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: QGLCACIPASRRALP*FQVLFPCCFAEAFL
Trigger: AAGGAAGGCCTCAGCAAAGCAGCATGGAAATAAGACCTGAAAGCACGGAAGGGCCCTCCGGGAGGCGGGTATGCAGGCGCAAAGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp TTTCAGGGTTTGAGACCATCTGCTTCCAATTGCTGGGCCACCCTGTaGGAGACCTCGATCCCCAGGCCCTGGGAAGCCACGCCCTTGTCA +
Preference number: 5 (lower is better)
Translates to: FQGLRPSASNCWATL*ETSIPRPWEATPLS
Trigger: TGACAAGGGCGTGGCTTCCCAGGGCCTGGGGATCGAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 90 bp ATGGCGCATACATCACGCCGGTCCTGGCATCTGAGGTGCCCGTGCTaGTCCACGTTAAGGATTCACTCGTGGTGGCATGGCTACGGTGCT +
Preference number: 5 (lower is better)
Translates to: MAHTSRRSWHLRCPC*STLRIHSWWHGYGA
Trigger: AGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATGTATGCGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS-3UTR CAA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATACCTCCTCGCGCGCGTaGTACCAGATCTCGAACTTC +
Preference number: 5 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNTSSRA*YQISNF
Trigger: GAAGTTCGAGATCTGGTACAACGCGCGCGAGGAGGT...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCCCTGGAACCAGCTTCTaGGGGCCCAACCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFPGTSF*GPNPPS
Trigger: GGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAGG...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVALLRP*ARGSST
Trigger: AGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGCCCAGTTCTGCTGTGACTaGAATAAAATACTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RQKQHGGARTRCRCPAPAQFCCD*NKILSP
Trigger: TGGGGAGAGTATTTTATTCAAGTCACAGCAGAACTG...GGCAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCGACAGTTCTGCTGTGACTaGAATAAAATACTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: EGGLAALAAAGRVAQHGRQFCCD*NKILSP
Trigger: TGGGGAGAGTATTTTATTCAAGTCACAGCAGAACTG...TCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp GAAACCCCGACTGCTGAGACGTTCTGTGTCTTGACAGACAAAGGCAGATGGCAGAGCACCAGCACCATCTaGGCCGCGAAGCGGGGACGC +
Preference number: 5 (lower is better)
Translates to: ETPTAETFCVLTDKGRWQSTSTI*AAKRGR
Trigger: GCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGCT...CTGCCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTCAGCAGTCGGGGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS-3UTR CAA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCGGACGAGCTGCAGGTTaGCCGGGAAAGATGCTGCGA +
Preference number: 5 (lower is better)
Translates to: PTDTFSSTCDQGASGSAIGRAAG*PGKMLR
Trigger: TCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTCC...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACACACAGCACTGAGCTaGTCGACTGGACGTCATTGG +
Preference number: 5 (lower is better)
Translates to: RGCSLPWLCARCPVLESRHTALS*STGRHW
Trigger: CCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTG...TCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGTGCACGGTGGCCTGGTaGTCAAGCTGGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: EAVKCLYGEGHTRARSCACTVAW*SSWSWF
Trigger: GAACCAGGACCAGCTTGACAACCAGGCCACCGTGCA...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGCAGCCCCCTCCTCCTaGCGATCTCCGCAGAGAACT +
Preference number: 5 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGAAPSS*RSPQRT
Trigger: AGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTGC...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ACGAGTTGCTCAGCACGGCCGACCCCGGGCTCGACTCTGCGGGGAGATCAGGCGTATTTCAGCATTTCCTaGAGCAGCAGCTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: TSCSARPTPGSTLRGDQAYFSIS*SSSWYL
Trigger: CAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAATA...CGCCTGATCTCCCCGCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
CDS-3UTR CAA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCAACCTTGTTGCTATTTaGTCATCATCGCCGTCTGAC +
Preference number: 5 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSNLVAI*SSSPSD
Trigger: GTCAGACGGCGATGATGACAAAATAGCAACAAGGTT...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp CACCAATCTGAGCTGGCCGTGGCTGCTCCCTCCCGTGGCTCTGTGCACGCTGTCTCTCTAAGCAGTGACTaGTCACGTCTGATCCGATGC +
Preference number: 5 (lower is better)
Translates to: HQSELAVAAPSRGSVHAVSLSSD*SRLIRC
Trigger: GCATCGGATCAGACGTGACAAGTCACTGCTTAGAGA...GACAGCGTGCACAGAGCCACGGGAGGGAGCAGCCACGGCCAGCTCAGATTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCACGGCCAACTTTGCTGTGTTTaGAGCTTTATAGTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GEGGLAALAAAGRVAQHGQLCCV*SFIVSG
Trigger: GCCACTGACTATAAAGCTCAAAACACAGCAAAGTTG...GCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS-3UTR CAA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTGCTCAGCTTGCTTCCAGGTCTCTaGCACAGGATAAATCTCCAA +
Preference number: 5 (lower is better)
Translates to: RSEKGAWPPSLQLDELLSLLPGL*HRINLQ
Trigger: TTGGAGATTTATCCTGTGCAAGAGACCTGGAAGCAA...GCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS-3UTR CAA 90 bp CCAGGCCAGCCCTACAAGCACGGCTCTCGAGGAACAGCCCACGCCACGGCCTCCTTGCTTCCAGGTCTCTaGCACAGGATAAATCTCCAA +
Preference number: 5 (lower is better)
Translates to: PGQPYKHGSRGTAHATASLLPGL*HRINLQ
Trigger: TTGGAGATTTATCCTGTGCAAGAGACCTGGAAGCAA...GGAGGCCGTGGCGTGGGCTGTTCCTCGAGAGCCGTGCTTGTAGGGCTGGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp TGCCTGCGCCCAGGCTTTGCGGCACAGACCGGCCTCTGCGGACCAGGGATGCCCCAGACGCTTCCAGCATaGCTCGATTTTAACAATGAA +
Preference number: 5 (lower is better)
Translates to: CLRPGFAAQTGLCGPGMPQTLPA*LDFNNE
Trigger: TTCATTGTTAAAATCGAGCAATGCTGGAAGCGTCTG...GGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS GCA 90 bp CAGGTGCTCCACATGCGCCAGGCTGTTGCCGATGTCTGTGAAGGTTaGTATCTTCTGGGACGCTGCGTCCAAGATGGCTTTGACCTCCCG +
Preference number: 5 (lower is better)
Translates to: QVLHMRQAVADVCEG*YLLGRCVQDGFDLP
Trigger: CGGGAGGTCAAAGCCATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTTCACAGACATCGGCAACAGCCTGGCGCATGTGGAGCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000475524.1
ENST00000535094.7
CDS GCA 90 bp TCCCTCTTCTTGCAGAAGAGCACTGCCTTCTCGTGCAGGAACAGGTaGCGCTGCATGGGCTTGAACCTGGCCAGCTCCTTCACCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SLFLQKSTAFSCRNR*RCMGLNLASSFTLV
Trigger: CACCAAGGTGAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAGAAGAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 90 bp CGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTGCCGAGTaGCTCCCGAGACTGGCAGGACACCAGCTCACTGTGGACGAGATG +
Preference number: 5 (lower is better)
Translates to: RVCRHRGEGCTHTAE*LPRLAGHQLTVDEM
Trigger: CATCTCGTCCACAGTGAGCTGGTGTCCTGCCAGTCTCGGGAGGCACTCGGCAGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS GCA 90 bp AGAATGCCTGGCACGTTTCAGGGTTTGAGACCATCTGCTTCCAATTaGTGGGCCACCCTGTGGGAGACCTCGATCCCCAGGCCCTGGGAA +
Preference number: 5 (lower is better)
Translates to: RMPGTFQGLRPSASN*WATLWETSIPRPWE
Trigger: TTCCCAGGGCCTGGGGATCGAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCAGGCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 90 bp CTTATGGCGCATACATCACGCCGGTCCTGGCATCTGAGGTGCCCGTaGTGGTCCACGTTAAGGATTCACTCGTGGTGGCATGGCTACGGT +
Preference number: 5 (lower is better)
Translates to: LMAHTSRRSWHLRCP*WSTLRIHSWWHGYG
Trigger: ACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATGTATGCGCCATAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 90 bp GCAGCCACGAAAAAGGCGCCCGATGCCACTGGATGCCGCCCGGCCTaGCTGTGTGGGGCTTCCACTCACTCTACGTTTAAATCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: AATKKAPDATGCRPA*LCGASTHSTFKSLC
Trigger: ACACAAAGATTTAAACGTAGAGTGAGTGGAAGCCCCACACAGGCAGGCCGGGCGGCATCCAGTGGCATCGGGCGCCTTTTTCGTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp TCTCTGTGTGCGCACACAGCACTGAGCTTGTCGACTGGACGTCATTaGGCAGCTCTGTTTCAGCCAGCTCGGTCCCGAAGGACTGCAGCA +
Preference number: 5 (lower is better)
Translates to: SLCAHTALSLSTGRH*AALFQPARSRRTAA
Trigger: TGCTGCAGTCCTTCGGGACCGAGCTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 90 bp ACATGCGCCAGGCTGTTGCCGATGTCTGTGAAGGTTGCTATCTTCTaGGACGCTGCGTCCAAGATGGCTTTGACCTCCCGGAAGCCCTGC +
Preference number: 5 (lower is better)
Translates to: TCARLLPMSVKVAIF*DAASKMALTSRKPC
Trigger: GCAGGGCTTCCGGGAGGTCAAAGCCATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTTCACAGACATCGGCAACAGCCTGGCGCATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 90 bp ACAGAGGTGAAGGATGTACTCACACTGCCGAGTGCCTCCCGAGACTaGCAGGACACCAGCTCACTGTGGACGAGATGCCGAGACCTCTGT +
Preference number: 5 (lower is better)
Translates to: TEVKDVLTLPSASRD*QDTSSLWTRCRDLC
Trigger: ACAGAGGTCTCGGCATCTCGTCCACAGTGAGCTGGTGTCCTGCCAGTCTCGGGAGGCACTCGGCAGTGTGAGTACATCCTTCACCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS CCA 90 bp GCAACTACACTGTCTGGTGTGAGGCTGACATTCTCAGCATCTTCCTaGAGGCTGGGACGAGCACATCAGATGAGAGACCCCCGCGGCACC +
Preference number: 5 (lower is better)
Translates to: ATTLSGVRLTFSASS*RLGRAHQMRDPRGT
Trigger: GGTGCCGCGGGGGTCTCTCATCTGATGTGCTCGTCCCAGCCTCCAGGAAGATGCTGAGAATGTCAGCCTCACACCAGACAGTGTAGTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397024.1
CDS CCA 90 bp CCTCCAGTAACAGGTGCTACACGTGCCTTTTCCACAAAGGGACCTTaGATGTGCCAGGCCACGGAGATGGAACCCAGCTGCCCTCCCTCT +
Preference number: 5 (lower is better)
Translates to: PPVTGATRAFSTKGP*MCQATEMEPSCPPS
Trigger: AGAGGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGCACCTGTTACTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp CAAACAGACTCTCGGATGCCAAGGGAAAGTCCTTGGAAAGGAGGGTaGCTACATGCGAGGCTGGGTTACTGGGGAAGGGAGGCGGTGGTG +
Preference number: 5 (lower is better)
Translates to: QTDSRMPRESPWKGG*LHARLGYWGREAVV
Trigger: CACCACCGCCTCCCTTCCCCAGTAACCCAGCCTCGCATGTAGCCACCCTCCTTTCCAAGGACTTTCCCTTGGCATCCGAGAGTCTGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCACCTCCTCGCGCGCGTaGTACCAGATCTCGAACTTC +
Preference number: 5 (lower is better)
Translates to: PTDTFSSTCDQGASGSAITSSRA*YQISNF
Trigger: GAAGTTCGAGATCTGGTACAACGCGCGCGAGGAGGT...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGAGGCATCCTTGAGTTTCCTCTaGAGGGACTGGTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: HFCTQGGHQVAGGPGWEASLSFL*RDWCWS
Trigger: CGACCAGCACCAGTCCCTCAAGAGGAAACTCAAGGA...TGCCTCCCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCC +
Preference number: 5 (lower is better)
Translates to: SAALVHATPCRNCIFVFSLQLDE*LSTADP
Trigger: GGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAG...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGAGGCAGAAGCAGCACGGTGGAGCCAGGACGAGATGCCGCTGCCCGGCGCCTGATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 5 (lower is better)
Translates to: RGRSSTVEPGRDAAARRLIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...CAGGCGCCGGGCAGCGGCATCTCGTCCTGGCTCCACCGTGCTGCTTCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACGGAGGACATTCTGGAACTCCTaGTCCGGAATCTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: CLYGEGHTRARSCATRRRTFWNS*SGISLK
Trigger: CTTCAGCGAGATTCCGGACAAGGAGTTCCAGAATGT...CCTCCGTCTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAAAATCCTCCTTCGCCTaGTCCTTCTTCTCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: CPALLRPLARGSSTSPEAKSSFA*SFFSVC
Trigger: GCACACAGAGAAGAAGGACAAGGCGAAGGAGGATTT...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATTGCAGCTCCAGGGACTaGCTGAGCAGCCCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHCSSRD*LSSPLL
Trigger: GAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCA...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCGTGCTCCATGAGATCTaGGTTGAGGATGGATTCGTA +
Preference number: 5 (lower is better)
Translates to: VPRSPQAVGQRILHFSGSVLHEI*VEDGFV
Trigger: TACGAATCCATCCTCAACCAAGATCTCATGGAGCAC...GCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GAAGCTGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGGAGTCCAGGCTCAGCTaGTGGTCCAGCTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: EAVKCLYGEGHTRARSCAESRLS*WSSFLW
Trigger: CCAGAGAAAGCTGGACCACAAGCTGAGCCTGGACTC...CGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACAGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTAGGACTTCCCAAGTGCGCTCCTGACGAAGACGTTTGCACAGGACGCTGGGGTCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTC +
Preference number: 5 (lower is better)
Translates to: VGLPKCAPDEDVCTGRWGRLRCV*NKPDDV
Trigger: GACGTCATCAGGCTTGTTCAAGACACACCGGAGGCG...ACCCCAGCGTCCTGTGCAAACGTCTTCGTCAGGAGCGCACTTGGGAAGTCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS TCA 90 bp CGTGGTGGCATGGCTACGGTGCTGGGAGAAAATCCCCAAGACTTCTaGAGGTTCCCAAGCATCTGCTGGAAACGGGAGAGGAGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: RGGMATVLGENPQDF*RFPSICWKRERRQH
Trigger: GTGCTGCCTCCTCTCCCGTTTCCAGCAGATGCTTGGGAACCTTCAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS GCA 90 bp CGTGGGCTCACTCTGCAGCCAAGCCAATTGCGTGATGCCAGCAGCTaGTACCACCAGCCAATCCAAAGCAGAAACAACCACACGGGCATG +
Preference number: 5 (lower is better)
Translates to: RGLTLQPSQLRDASS*YHQPIQSRNNHTGM
Trigger: CATGCCCGTGTGGTTGTTTCTGCTTTGGATTGGCTGGTGGTAGCAGCTGCTGGCATCACGCAATTGGCTTGGCTGCAGAGTGAGCCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 90 bp GGCAGCACTCTCTGCGACAGCCACATCTGTGACAGAGACCACACTTaGGCGTTGTATAACGACAGCCTCCGTCCTCGGATGAGCCTGGTA +
Preference number: 5 (lower is better)
Translates to: GSTLCDSHICDRDHT*ALYNDSLRPRMSLV
Trigger: TACCAGGCTCATCCGAGGACGGAGGCTGTCGTTATACAACGCGCAAGTGTGGTCTCTGTCACAGATGTGGCTGTCGCAGAGAGTGCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 90 bp AACAGTCTTATGGCGCATACATCACGCCGGTCCTGGCATCTGAGGTaGCCGTGCTGGTCCACGTTAAGGATTCACTCGTGGTGGCATGGC +
Preference number: 5 (lower is better)
Translates to: NSLMAHTSRRSWHLR*PCWSTLRIHSWWHG
Trigger: GCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATGTATGCGCCATAAGACTGTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 90 bp GAAAGCTGTGCAGTACCACTTCCAACTTCCAGCCTGGAGCGTCTCTaGACACAGCCCCCGTCCTGCCTGGTCAGGACTGTTGTGCTTTGT +
Preference number: 5 (lower is better)
Translates to: ESCAVPLPTSSLERL*TQPPSCLVRTVVLC
Trigger: ACAAAGCACAACAGTCCTGACCAGGCAGGACGGGGGCTGTGTGCAGAGACGCTCCAGGCTGGAAGTTGGAAGTGGTACTGCACAGCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp CCTGCAGATGTTCAGACACGAGTGCTCAGAATGGCCGCTGCCGTGTaGGTGAGGCCATCACTCCTAAAACCAATCCTAAAAGCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: PADVQTRVLRMAAAV*VRPSLLKPILKARP
Trigger: CGGCCGCGCTTTTAGGATTGGTTTTAGGAGTGATGGCCTCACGCACACGGCAGCGGCCATTCTGAGCACTCGTGTCTGAACATCTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494043.1
CDS CCA 90 bp CTGGCCTGCCTGCGGTGGAACACCTCCTCCATGCTTGCCTGCTTCTaGAAGACCTTTCGCACGTGCTCCATGAGATCTTGGTTGAGGATG +
Preference number: 5 (lower is better)
Translates to: LACLRWNTSSMLACF*KTFRTCSMRSWLRM
Trigger: CATCCTCAACCAAGATCTCATGGAGCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCCTGGAACCAGCTTCTaGGGGCCCAACCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKPGTSF*GPNPPS
Trigger: GGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAGG...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGTCCAGAGGCAGAAGCATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 5 (lower is better)
Translates to: AAPPRSARPLKAPSRGRSIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...GCTTCTGCCTCTGGACGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGCAGAGAGGTGCCGTGGGGGTGCAAGGAGATGCCTCATCCTAAAGACTTCGATTTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: GREVPWGCKEMPHPKDFDFTEVH*SRRRSI
Trigger: GATAGACCGGCGACGGGACAAATGGACCTCCGTGAA...ATCGAAGTCTTTAGGATGAGGCATCTCCTTGCACCCCCACGGCACCTCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CAA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGCACACAGCACTGAGCTaGTCGACTGGACGTCATTGG +
Preference number: 5 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDEHTALS*STGRHW
Trigger: CCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTG...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCAGCTCCAGTTTCTGCTGATGCTTaGCCCAGAACTCATCGAAGG +
Preference number: 5 (lower is better)
Translates to: ALLRPLARGSSTSPEAAPVSADA*PRTHRR
Trigger: CCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAAC...TGGAGCTGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGTAAAGTGCCTTTATGGGGAGGGTCACACAAGGGCGCGCAGCTGTGCGACGAGACATGCGCCAGGCTGTaGCCGATGTCTGTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: CKVPLWGGSHKGAQLCDETCARL*PMSVKV
Trigger: AACCTTCACAGACATCGGCAACAGCCTGGCGCATGT...CTCGTCGCACAGCTGCGCGCCCTTGTGTGACCCTCCCCATAAAGGCACTTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAATCCATGAGATCTTGGTaGAGGATGGATTCGTATTCC +
Preference number: 5 (lower is better)
Translates to: PCPALLRPLARGSSTSPESMRSW*RMDSYS
Trigger: GGAATACGAATCCATCCTCAACCAAGATCTCATGGA...TTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGGAGTCCAGGCTCAGCTaGTGGTCCAGCTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVESRLS*WSSFLW
Trigger: CCAGAGAAAGCTGGACCACAAGCTGAGCCTGGACTC...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTTATTTCAGCATTTCCTaGAGCAGCAGCTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: ETPCPALLRPLARGSSTSYFSIS*SSSWYL
Trigger: CAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAATA...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCTATTTCAGCATTTCCTaGAGCAGCAGCTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: SEAGAGLSELWSAALVHAYFSIS*SSSWYL
Trigger: CAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAATA...GGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCCCCTGCATCAGCAGCTaGCCCAGGTCGCCGAGATTC +
Preference number: 5 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFPCISS*PRSPRF
Trigger: GAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGGG...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGAACCTTGTTGCTATTTaGTCATCATCGCCGTCTGAC +
Preference number: 5 (lower is better)
Translates to: STSPEAAPPRSARPLKAPNLVAI*SSSPSD
Trigger: GTCAGACGGCGATGATGACAAAATAGCAACAAGGTT...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTTCCTTTTTGGCCTCATaGGGCCGTTGTGGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTSFLAS*GRCGEE
Trigger: TTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGA...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp CGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTC +
Preference number: 5 (lower is better)
Translates to: RGTAHATASTQFAILALCRLRCV*NKPDDV
Trigger: GACGTCATCAGGCTTGTTCAAGACACACCGGAGGCG...ACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp CCCACGGACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCAGTGAGTGGGACGTTTaGCTCCAACCTCGCACACCA +
Preference number: 5 (lower is better)
Translates to: PTDTFSSTCDQGASGSAISEWDV*LQPRTP
Trigger: TGGTGTGCGAGGTTGGAGCAAAACGTCCCACTCACT...GATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000453297.5
CDS-3UTR CAA 90 bp TGCCTGCGCCCAGGCTTTGCGGCACAGACCGGCCTCTGCGGACCAGGGATGCCCTCTAACCAAGTTATTTaGCTTAGCTTCCCTTTGTGT +
Preference number: 5 (lower is better)
Translates to: CLRPGFAAQTGLCGPGMPSNQVI*LSFPLC
Trigger: ACACAAAGGGAAGCTAAGCAAAATAACTTGGTTAGA...GGGCATCCCTGGTCCGCAGAGGCCGGTCTGTGCCGCAAAGCCTGGGCGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS TCA 90 bp GGACACCCCTGCAAACTTCCAGAATGCCTGGCACGTTTCAGGGTTTaGGACCATCTGCTTCCAATTGCTGGGCCACCCTGTGGGAGACCT +
Preference number: 5 (lower is better)
Translates to: GHPCKLPECLARFRV*DHLLPIAGPPCGRP
Trigger: AGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCAGGCATTCTGGAAGTTTGCAGGGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS TCA 90 bp TGGGCCCCCAACAGAGCCTGTCATCTTCCCGGGTTCATAAAGAGCTaGGCAGGACACCCCTGCAAACTTCCAGAATGCCTGGCACGTTTC +
Preference number: 5 (lower is better)
Translates to: WAPNRACHLPGFIKS*AGHPCKLPECLARF
Trigger: GAAACGTGCCAGGCATTCTGGAAGTTTGCAGGGGTGTCCTGCTCAGCTCTTTATGAACCCGGGAAGATGACAGGCTCTGTTGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS TCA 90 bp GACCCTTGGTGTCTTTGCTTCTCAAACGTCAACCTGCACCCAAGATaGGAAGAGGAGTCTGGGAGAAGGGTCCCTGCACAGCAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: DPWCLCFSNVNLHPR*EEESGRRVPAQQGG
Trigger: GCCACCCTGCTGTGCAGGGACCCTTCTCCCAGACTCCTCTTCTCATCTTGGGTGCAGGTTGACGTTTGAGAAGCAAAGACACCAAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 90 bp CAGGGAGCTGATCCCGGAGCTCTCTGGGTCCCAGTCCTCCTAGAGTaGAGGAGAGAAGAGCCCAGAATGACTAATTTCCACCGAGCACGT +
Preference number: 5 (lower is better)
Translates to: QGADPGALWVPVLLE*RREEPRMTNFHRAR
Trigger: ACGTGCTCGGTGGAAATTAGTCATTCTGGGCTCTTCTCTCCTTCACTCTAGGAGGACTGGGACCCAGAGAGCTCCGGGATCAGCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp AAAGTGCCGGAGCTGCAGACACTGCTCCAGTTTCTGCTGATGCTTTaGCCAGAACTCATCGAAGGCAGCCTCGGTTTCGTTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KVPELQTLLQFLLML*PELIEGSLGFVQLG
Trigger: GCCCAGCTGAACGAAACCGAGGCTGCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCAGTGTCTGCAGCTCCGGCACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS GCA 90 bp CCTGACTTAATCTCACAGGCTCCACCTGGCAAGCGGAGACTTTTCTaGATTAAGCCAAAGTCAACTGGGTGGCACGGCTCAGCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: PDLISQAPPGKRRLF*IKPKSTGWHGSAPG
Trigger: GCCGGGAGCTGAGCCGTGCCACCCAGTTGACTTTGGCTTAATGCAGAAAAGTCTCCGCTTGCCAGGTGGAGCCTGTGAGATTAAGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464800.5
CDS GCA 90 bp GCAAACTTCCAGAATGCCTGGCACGTTTCAGGGTTTGAGACCATCTaGTTCCAATTGCTGGGCCACCCTGTGGGAGACCTCGATCCCCAG +
Preference number: 5 (lower is better)
Translates to: ANFQNAWHVSGFETI*FQLLGHPVGDLDPQ
Trigger: CTGGGGATCGAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCAGGCATTCTGGAAGTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 90 bp CTTCCAACTTCCAGCCTGGAGCGTCTCTGCACACAGCCCCCGTCCTaGCTGGTCAGGACTGTTGTGCTTTGTGTAAGAGGAAGTGCATGT +
Preference number: 5 (lower is better)
Translates to: LPTSSLERLCTQPPS*LVRTVVLCVRGSAC
Trigger: ACATGCACTTCCTCTTACACAAAGCACAACAGTCCTGACCAGGCAGGACGGGGGCTGTGTGCAGAGACGCTCCAGGCTGGAAGTTGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp TTCCTGTCTGTGCTGTTCCCGCTTTGTCTCCGGGGCCTAGAACTGTaGCTGGCACACAGCGGATGCTGCACAGATGTCATGGAACACGTT +
Preference number: 5 (lower is better)
Translates to: FLSVLFPLCLRGLEL*LAHSGCCTDVMEHV
Trigger: AACGTGTTCCATGACATCTGTGCAGCATCCGCTGTGTGCCAGGCACAGTTCTAGGCCCCGGAGACAAAGCGGGAACAGCACAGACAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 90 bp TTGTCCTTCTTCTCTGTGTGCGCACACAGCACTGAGCTTGTCGACTaGACGTCATTGGGCAGCTCTGTTTCAGCCAGCTCGGTCCCGAAG +
Preference number: 5 (lower is better)
Translates to: LSFFSVCAHSTELVD*TSLGSSVSASSVPK
Trigger: CTTCGGGACCGAGCTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGAAGAAGGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 90 bp TGGATCTTATTTTCCGCACCGGTCTCCAAAAACTTCTCGATTTCCTaGAGGGCAGCCTCCGCGCCGTCCTGGGACTGGCACTTGTCCACA +
Preference number: 5 (lower is better)
Translates to: WILFSAPVSKNFSIS*RAASAPSWDWHLST
Trigger: TGTGGACAAGTGCCAGTCCCAGGACGGCGCGGAGGCTGCCCTCCAGGAAATCGAGAAGTTTTTGGAGACCGGTGCGGAAAATAAGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 90 bp GAGGTGCCCGTGCTGGTCCACGTTAAGGATTCACTCGTGGTGGCATaGCTACGGTGCTGGGAGAAAATCCCCAAGACTTCTGAAGGTTCC +
Preference number: 5 (lower is better)
Translates to: EVPVLVHVKDSLVVA*LRCWEKIPKTSEGS
Trigger: GGAACCTTCAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS CCA 90 bp TGGCATCTGAGGTGCCCGTGCTGGTCCACGTTAAGGATTCACTCGTaGTGGCATGGCTACGGTGCTGGGAGAAAATCCCCAAGACTTCTG +
Preference number: 5 (lower is better)
Translates to: WHLRCPCWSTLRIHS*WHGYGAGRKSPRLL
Trigger: CAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS CCA 90 bp AAATCACATAGGAAAGCTGTGCAGTACCACTTCCAACTTCCAGCCTaGAGCGTCTCTGCACACAGCCCCCGTCCTGCCTGGTCAGGACTG +
Preference number: 5 (lower is better)
Translates to: KSHRKAVQYHFQLPA*SVSAHSPRPAWSGL
Trigger: CAGTCCTGACCAGGCAGGACGGGGGCTGTGTGCAGAGACGCTCCAGGCTGGAAGTTGGAAGTGGTACTGCACAGCTTTCCTATGTGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTGCTCTCCTCAGGCCGTaGGCCAGAGGATCCTCCACT +
Preference number: 5 (lower is better)
Translates to: SAALVHATPCRNCIFVFSALLRP*ARGSST
Trigger: AGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGC...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GAGACCCCGTGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: ETPCPALLRPLARGSSTSDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...AGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCACGGGGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCCACTTCTCCGGAAGCAGCTCCACCACGGTCCGCGCGTCCCCTGAAAGCACCGCAGTTCTGCTGTGACTaGAATAAAATACTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: STSPEAAPPRSARPLKAPQFCCD*NKILSP
Trigger: TGGGGAGAGTATTTTATTCAAGTCACAGCAGAACTG...CGGTGCTTTCAGGGGACGCGCGGACCGTGGTGGAGCTGCTTCCGGAGAAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGAGAAAGAAACTATGCAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCACATTCTGGAACTCCTaGTCCGGAATCTCGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RERNYAEGIATRCGGGSGTFWNS*SGISLK
Trigger: CTTCAGCGAGATTCCGGACAAGGAGTTCCAGAATGT...GCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGCATAGTTTCTTTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGCTGACGGACGAGCTGCAGGTTaGCCGGGAAAGATGCTGCGA +
Preference number: 5 (lower is better)
Translates to: VGEVAELIAIKRHLKPADGRAAG*PGKMLR
Trigger: TCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTCC...GTCAGCAGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CAA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCGTCGACTGGACGTCATaGGGCAGCTCTGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFVDWTS*GSSVSA
Trigger: GGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGAC...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTGCAGCCCCCTCCTCCTaGCGATCTCCGCAGAGAACT +
Preference number: 5 (lower is better)
Translates to: SAALVHATPCRNCIFVFSAAPSS*RSPQRT
Trigger: AGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTGC...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCATTCCTGGGACTGGCACTaGTCCACAGGTTGTGAGGCC +
Preference number: 5 (lower is better)
Translates to: TFSSTCDQGASGSAIRFHSWDWH*STGCEA
Trigger: GGCCTCACAACCTGTGGACAAGTGCCAGTCCCAGGA...ATGGAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGCCGCTGTGTTGTGAAGGCCTGTaGACAGGAGGTGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: SYLIPHPGGLASDGYKPLCCEGL*TGGEPS
Trigger: TGATGGCTCACCTCCTGTCAACAGGCCTTCACAACA...CAGCGGCTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGCCCCGCTCTCCTCAGGCCGTTGGCCAGAGGATCCTCCACTTCTCCGGAAGCATATTTCAGCATTTCCTaGAGCAGCAGCTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: CPALLRPLARGSSTSPEAYFSIS*SSSWYL
Trigger: CAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAATA...TGCTTCCGGAGAAGTGGAGGATCCTCTGGCCAACGGCCTGAGGAGAGCGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CTGAGGAAGACTGACGGCGACAGCTGGGGAACGTCCCAGGTAAGGGAGTCAGAATCCGTTTCCTCCTTTTaGGCCTCATTGGGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: LRKTDGDSWGTSQVRESESVSSF*ASLGRC
Trigger: ACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGA...TTCTGACTCCCTTACCTGGGACGTTCCCCAGCTGTCGCCGTCAGTCTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGAATTTAGCTGCTCCCTaGACTCCAGGACCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSNLAAP*TPGPSC
Trigger: GCAGGAGGGTCCTGGAGTCAAGGGAGCAGCTAAATT...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp GCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTGCGAGACGGCGGTGGGGAGGGAAAAGAAGCTGCTGCATaGAAATTTAGCTGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: ASFERSPLAVLRDGGGEGKEAAA*KFSCSL
Trigger: AAGGGAGCAGCTAAATTTCAATGCAGCAGCTTCTTT...TCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS TCA 90 bp ATCCTCCTTCGCCTTGTCCTTCTTCTCTGTGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTCATTGGGCAGCTCTGTTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: ILLRLVLLLCVRTQH*ACRLDVIGQLCFSQ
Trigger: CTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGAAGAAGGACAAGGCGAAGGAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 90 bp CATCTGAGGTGCCCGTGCTGGTCCACGTTAAGGATTCACTCGTGGTaGCATGGCTACGGTGCTGGGAGAAAATCCCCAAGACTTCTGAAG +
Preference number: 5 (lower is better)
Translates to: HLRCPCWSTLRIHSW*HGYGAGRKSPRLLK
Trigger: CTTCAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS CCA 90 bp GTGCAGAATCTGCAAACAGACTCTCGGATGCCAAGGGAAAGTCCTTaGAAAGGAGGGTGGCTACATGCGAGGCTGGGTTACTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: VQNLQTDSRMPRESP*KGGWLHARLGYWGR
Trigger: CCTTCCCCAGTAACCCAGCCTCGCATGTAGCCACCCTCCTTTCCAAGGACTTTCCCTTGGCATCCGAGAGTCTGTTTGCAGATTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp GTGAGGCAGGGGCAGGGCTCTCTGAGCTATGGTCGGCAGCACTGGTCCACGCCATCATCTCTATTGAATTaGAAAGCGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: VRQGQGSLSYGRQHWSTPSSLLN*KAMSER
Trigger: TCTCTCCGACATCGCTTTCAAATTCAATAGAGATGA...TGGCGTGGACCAGTGCTGCCGACCATAGCTCAGAGAGCCCTGCCCCTGCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCGTCGACTGGACGTCATaGGGCAGCTCTGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIVDWTS*GSSVSA
Trigger: GGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGAC...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCTTGCACGGTGGCCTGGTaGTCAAGCTGGTCCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SAALVHATPCRNCIFVFSCTVAW*SSWSWF
Trigger: GAACCAGGACCAGCTTGACAACCAGGCCACCGTGCA...AGAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTGCAGCCCCCTCCTCCTaGCGATCTCCGCAGAGAACT +
Preference number: 5 (lower is better)
Translates to: LRLAKPCRVKRFLESAELAAPSS*RSPQRT
Trigger: AGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTGC...AAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCACACCTCCTCCATGCTaGCCTGCTTCTGGAAGACCT +
Preference number: 5 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFTPPPC*PASGRP
Trigger: AGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGT...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGCCCTGCATCAGCAGCTaGCCCAGGTCGCCGAGATTC +
Preference number: 5 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMPCISS*PRSPRF
Trigger: GAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGGG...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTTTGGTGTGGCCCCTCTaGTGGTCGGTCCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: LRLAKPCRVKRFLESAELLVWPL*WSVQTL
Trigger: CAGCGTCTGGACCGACCACAAGAGGGGCCACACCAA...AAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGGGCCTCATTGGGCCGTaGTGGGGAAGAATAACTGTT +
Preference number: 5 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSGLIGP*WGRITV
Trigger: AACAGTTATTCTTCCCCACAACGGCCCAATGAGGCC...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS TCA 90 bp ATGTACCTTCGCCTTGTCCTTCTTCTCTGTGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTCATTGGGCAGCTCTGTTTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: MYLRLVLLLCVRTQH*ACRLDVIGQLCFSQ
Trigger: CTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGAAGAAGGACAAGGCGAAGGTACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS TCA 90 bp ACACCTAGCAGACCGAGCCGGGAAGCAGTTTCTAAAGTGAATGACTaGAGCTCACTGAGAGGGCCTGACGCCCTTGACCTATGGGATACC +
Preference number: 5 (lower is better)
Translates to: TPSRPSREAVSKVND*SSLRGPDALDLWDT
Trigger: GGTATCCCATAGGTCAAGGGCGTCAGGCCCTCTCAGTGAGCTTCAGTCATTCACTTTAGAAACTGCTTCCCGGCTCGGTCTGCTAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS TCA 90 bp GGTCTCATAAAGTTTCAGGAATGTTCCAACTGGCTGCGTCTTCTGTaGCAGAGACCCAAACCACTCAGGGCTCGTGACCTTGGGAGCCCC +
Preference number: 5 (lower is better)
Translates to: GLIKFQECSNWLRLL*QRPKPLRARDLGSP
Trigger: GGGGCTCCCAAGGTCACGAGCCCTGAGTGGTTTGGGTCTCTGTCACAGAAGACGCAGCCAGTTGGAACATTCCTGAAACTTTATGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp GCAAACCCAGCTCCCCTTCTGCTATGGAAGGCAGCGTGCAGAATCTaGAAACAGACTCTCGGATGCCAAGGGAAAGTCCTTGGAAAGGAG +
Preference number: 5 (lower is better)
Translates to: ANPAPLLLWKAACRI*KQTLGCQGKVLGKE
Trigger: CTCCTTTCCAAGGACTTTCCCTTGGCATCCGAGAGTCTGTTTGCAGATTCTGCACGCTGCCTTCCATAGCAGAAGGGGAGCTGGGTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp CCCTGTTCCTGCAGATGTTCAGACACGAGTGCTCAGAATGGCCGCTaGCGTGTGCGTGAGGCCATCACTCCTAAAACCAATCCTAAAAGC +
Preference number: 5 (lower is better)
Translates to: PCSCRCSDTSAQNGR*RVREAITPKTNPKS
Trigger: GCTTTTAGGATTGGTTTTAGGAGTGATGGCCTCACGCACACGGCAGCGGCCATTCTGAGCACTCGTGTCTGAACATCTGCAGGAACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494043.1
CDS-3UTR CAA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTGGCACCCAGCCCTCCTaGCCAGTGGTCGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSGTQPS*PVVGSL
Trigger: CAGGGACCCGACCACTGGCAAGGAGGGCTGGGTGCC...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCCCTCCCGTGGCTCTGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCAATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 5 (lower is better)
Translates to: SLPWLCARCPVLESRLPAIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...TGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACAGAGCCACGGGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GACACGTTTTCATCCACCTGTGACCAGGGAGCTTCAGGGAGTGCCATCCGTTTCCTGCATGCTTCCTATTaGATTCCGCACCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: DTFSSTCDQGASGSAIRFLHASY*IPHPGG
Trigger: ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAG...GAAACGGATGGCACTCCCTGAAGCTCCCTGGTCACAGGTGGATGAAAACGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTGGGTTTCTGCTGATGCTTaGCCCAGAACTCATCGAAGG +
Preference number: 5 (lower is better)
Translates to: HFHFCTQGGHQVAGGPGWVSADA*PRTHRR
Trigger: CCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAAC...CCACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGAGAAAGAAACTATGCAGAGGGCATCGCAACCCGATGCGGAGGCGGGTCCGGCTCCATGAGATCTTGGTaGAGGATGGATTCGTATTCC +
Preference number: 5 (lower is better)
Translates to: RERNYAEGIATRCGGGSGSMRSW*RMDSYS
Trigger: GGAATACGAATCCATCCTCAACCAAGATCTCATGGA...GCCGGACCCGCCTCCGCATCGGGTTGCGATGCCCTCTGCATAGTTTCTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTTTGCTTCCAGGTCTCTaGCACAGGATAAATCTCCAA +
Preference number: 5 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTLLPGL*HRINLQ
Trigger: TTGGAGATTTATCCTGTGCAAGAGACCTGGAAGCAA...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp CCCAAACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCGTCAGACACATCAATTaGGTGATCCGTTTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PKPLQTAPWDQRLSLASTVRHIN*VIRFLL
Trigger: AAGGAGGAAACGGATCACCAAATTGATGTGTCTGAC...GGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp CCCACTTTCACTTCTGTACTCAAGGTGGTCACCAGGTGGCAGGTGGACCTGGGTTGCCGCTTGGCTTTTTaGTCAGGACTGGTAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PTFTSVLKVVTRWQVDLGCRLAF*SGLVGE
Trigger: TTCTCCTACCAGTCCTGACAAAAAAGCCAAGCGGCA...ACCCAGGTCCACCTGCCACCTGGTGACCACCTTGAGTACAGAAGTGAAAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397017.6
CDS-3UTR CAA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGCGGCCTCCACACAGTTaGCCATTTTGGCTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSRPPHS*PFWLFV
Trigger: AACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCG...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp GCCTCCTTCGAGAGGTCACCGCTTGCTGTTCTGCGAGACGGCGGTGGGGAGGGATTGCTTAGCTTCCCTTaGTGTATATACAACACTGAT +
Preference number: 5 (lower is better)
Translates to: ASFERSPLAVLRDGGGEGLLSFP*CIYNTD
Trigger: ATCAGTGTTGTATATACACAAAGGGAAGCTAAGCAA...TCCCTCCCCACCGCCGTCTCGCAGAACAGCAAGCGGTGACCTCTCGAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS GCA 90 bp GTGCTGGTCCACGTTAAGGATTCACTCGTGGTGGCATGGCTACGGTaGTGGGAGAAAATCCCCAAGACTTCTGAAGGTTCCCAAGCATCT +
Preference number: 5 (lower is better)
Translates to: VLVHVKDSLVVAWLR*WEKIPKTSEGSQAS
Trigger: AGATGCTTGGGAACCTTCAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS GCA 90 bp GCTGCTACCACCAGCCAATCCAAAGCAGAAACAACCACACGGGCATaGCTAAGGCAGGGGCTAGAATCGCTAACTTCCAAGTCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: AATTSQSKAETTTRA*LRQGLESLTSKSLN
Trigger: GTTCAGAGACTTGGAAGTTAGCGATTCTAGCCCCTGCCTTAGGCATGCCCGTGTGGTTGTTTCTGCTTTGGATTGGCTGGTGGTAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 90 bp CCCTTGGGAGAGGCACAAAGTTACAGGTTATCCTCCAGTAACAGGTaGTACACGTGCCTTTTCCACAAAGGGACCTTGGATGTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: PLGEAQSYRLSSSNR*YTCLFHKGTLDVPG
Trigger: GCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGCACCTGTTACTGGAGGATAACCTGTAACTTTGTGCCTCTCCCAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp CCTGAGGCCCCCTCAGAAGCTGAGAAGATGCAGGTGCTAAGCCTGTaGAGCCTGCAGAACTGTGAGCCAATTACGCCTCTTTCTTTATCA +
Preference number: 5 (lower is better)
Translates to: PEAPSEAEKMQVLSL*SLQNCEPITPLSLS
Trigger: TGATAAAGAAAGAGGCGTAATTGGCTCACAGTTCTGCAGGCTGCACAGGCTTAGCACCTGCATCTTCTCAGCTTCTGAGGGGGCCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp CTGGTCCACGTTAAGGATTCACTCGTGGTGGCATGGCTACGGTGCTaGGAGAAAATCCCCAAGACTTCTGAAGGTTCCCAAGCATCTGCT +
Preference number: 5 (lower is better)
Translates to: LVHVKDSLVVAWLRC*EKIPKTSEGSQASA
Trigger: AGCAGATGCTTGGGAACCTTCAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS-3UTR CAA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCTTCTCCTCCCTCTTCTaGCAGAAGAGCACTGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLLVVETPPDVTHGHVFIFSSLF*QKSTAF
Trigger: GAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGAGAA...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCGCGCCTGCACAGTACATCAGGGACATCGCGGGACACAGCACGCGTTCCAAATGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: PRLHSTSGTSRDTARVPNDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...ATTTGGAACGCGTGCTGTGTCCCGCGATGTCCCTGATGTACTGTGCAGGCGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GAAAGCGCAGAGCTTTCTGAGGCAGAGCTAGTGACCGTGTCATCTATGAAGGAATTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: ESAELSEAELVTVSSMKEFTEVH*SRRRSI
Trigger: GATAGACCGGCGACGGGACAAATGGACCTCCGTGAA...TTCCTTCATAGATGACACGGTCACTAGCTCTGCCTCAGAAAGCTCTGCGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp TTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTTGTCGACTGGACGTCATaGGGCAGCTCTGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LRLAKPCRVKRFLESAELVDWTS*GSSVSA
Trigger: GGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGAC...AAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp TTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGTCGACTGGACGTCATaGGGCAGCTCTGTTTCAGCC +
Preference number: 5 (lower is better)
Translates to: FRSRRRGCRANCHQKASQVDWTS*GSSVSA
Trigger: GGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGAC...TTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CAA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTAAGAGATTCATCCTCTaGGTTATTAGACTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTKRFIL*VIRLSS
Trigger: GGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTT...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp GCTGGGCGGGGAGGCCGGGTCTGTAGACACAGAGGTGAAGGATGTACTCACACTTTCCTACCAGCAGGCTaGGAATTTTTGGCCATAAAA +
Preference number: 5 (lower is better)
Translates to: AGRGGRVCRHRGEGCTHTFLPAG*EFLAIK
Trigger: TTTTATGGCCAAAAATTCCAAGCCTGCTGGTAGGAA...AGTGTGAGTACATCCTTCACCTCTGTGTCTACAGACCCGGCCTCCCCGCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp TCAGGGACAGGCTTGCACCAAAACGATGAAGGTTGTGGGCATCGGAGCAGATATGACCACACTTGCGCGTaGTATAACGACAGCCTCCGT +
Preference number: 5 (lower is better)
Translates to: SGTGLHQNDEGCGHRSRYDHTCA*YNDSLR
Trigger: ACGGAGGCTGTCGTTATACAACGCGCAAGTGTGGTC...ATATCTGCTCCGATGCCCACAACCTTCATCGTTTTGGTGCAAGCCTGTCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397021.5
CDS-3UTR CAA 90 bp AGTGGGCCAAAAAGTCCAAAGCCTCTACAGTTTGGAGACATCACAGCTGACTGCATGCACCATTATCCTTaGCTCTCGGGGGCGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SGPKSPKPLQFGDITADCMHHYP*LSGAAC
Trigger: ACAGGCCGCCCCCGAGAGCAAAGGATAATGGTGCAT...GCAGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTGGACTTTTTGGCCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp CTGAAAACTCTGCCTCCTCATCATCCGTGGGCCAGACGCTTCCAGCATTGCTCGCAAAGCCTCTACAGTTaGGAGACATCACAGCTGACT +
Preference number: 5 (lower is better)
Translates to: LKTLPPHHPWARRFQHCSQSLYS*ETSQLT
Trigger: AGTCAGCTGTGATGTCTCCAAACTGTAGAGGCTTTG...CGAGCAATGCTGGAAGCGTCTGGCCCACGGATGATGAGGAGGCAGAGTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS GCA 90 bp GAGGCACAAAGTTACAGGTTATCCTCCAGTAACAGGTGCTACACGTaGCTTTTCCACAAAGGGACCTTGGATGTGCCAGGCCACGGAGAT +
Preference number: 5 (lower is better)
Translates to: EAQSYRLSSSNRCYT*LFHKGTLDVPGHGD
Trigger: ATCTCCGTGGCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGCACCTGTTACTGGAGGATAACCTGTAACTTTGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp GAGAATCTGACTTCACTGGGAGAATCTGACTTCACTGGGGTTTGGTaGTGGGGAATGCTTGGAGCAATTGTGCCATCACAGCTGAGGACC +
Preference number: 5 (lower is better)
Translates to: ENLTSLGESDFTGVW*WGMLGAIVPSQLRT
Trigger: GGTCCTCAGCTGTGATGGCACAATTGCTCCAAGCATTCCCCAGCACCAAACCCCAGTGAAGTCAGATTCTCCCAGTGAAGTCAGATTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp GTGTGTGTTCACTATACCCCAAATGGAAGCAGCAACTACACTGTCTaGTGTGAGGCTGACATTCTCAGCATCTTCCTGGAGGCTGGGACG +
Preference number: 5 (lower is better)
Translates to: VCVHYTPNGSSNYTV*CEADILSIFLEAGT
Trigger: CGTCCCAGCCTCCAGGAAGATGCTGAGAATGTCAGCCTCACACCAGACAGTGTAGTTGCTGCTTCCATTTGGGGTATAGTGAACACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397024.1
CDS CCA 90 bp CGCAGTCCCAGAACCTGCTCTCATCTACGGAAGGGCAGGCACTTTTaGTGTGTTCTTATTTCTCAGCCTAACACCAACCACCTCGAGTCA +
Preference number: 5 (lower is better)
Translates to: RSPRTCSHLRKGRHF*CVLISQPNTNHLES
Trigger: TGACTCGAGGTGGTTGGTGTTAGGCTGAGAAATAAGAACACACCAAAAGTGCCTGCCCTTCCGTAGATGAGAGCAGGTTCTGGGACTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp AATCTGACTTCACTGGGAGAATCTGACTTCACTGGGGTTTGGTGCTaGGGAATGCTTGGAGCAATTGTGCCATCACAGCTGAGGACCCAG +
Preference number: 5 (lower is better)
Translates to: NLTSLGESDFTGVWC*GMLGAIVPSQLRTQ
Trigger: CTGGGTCCTCAGCTGTGATGGCACAATTGCTCCAAGCATTCCCCAGCACCAAACCCCAGTGAAGTCAGATTCTCCCAGTGAAGTCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp CAGGAGAATCTGACTTCACTGGGAGAATCTGACTTCACTGGGGTTTaGTGCTGGGGAATGCTTGGAGCAATTGTGCCATCACAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: QENLTSLGESDFTGV*CWGMLGAIVPSQLR
Trigger: CCTCAGCTGTGATGGCACAATTGCTCCAAGCATTCCCCAGCACCAAACCCCAGTGAAGTCAGATTCTCCCAGTGAAGTCAGATTCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTTCTGCTCCTCTGCACTaGACCAGCCCCCGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPSAPLH*TSPRRP
Trigger: AGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGA...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACCCTGGAACCAGCTTCTaGGGGCCCAACCCGCCGTCC +
Preference number: 5 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHPGTSF*GPNPPS
Trigger: GGACGGCGGGTTGGGCCCCAAGAAGCTGGTTCCAGG...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ACACTCCTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAATTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: TLLLFRSRRRGCRANCHQFTEVH*SRRRSI
Trigger: GATAGACCGGCGACGGGACAAATGGACCTCCGTGAA...TTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAGGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CAA 90 bp GGACATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCACACAGCACTGAGCTaGTCGACTGGACGTCATTGG +
Preference number: 5 (lower is better)
Translates to: GHRGTQHAFQITYTSEEKHTALS*STGRHW
Trigger: CCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTG...CTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGCTGACTTCTTGGTCCACACAGCACTGAGCTaGTCGACTGGACGTCATTGG +
Preference number: 5 (lower is better)
Translates to: VAELIAIKRHLKPADFLVHTALS*STGRHW
Trigger: CCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTG...GACCAAGAAGTCAGCAGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CAA 90 bp ACCTTTGAGGTTAGCAAAACCCTGCAGGGTAAAGCGCTTTCTGGAAAGCGCAGAACATGCGCCAGGCTGTaGCCGATGTCTGTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: TFEVSKTLQGKALSGKRRTCARL*PMSVKV
Trigger: AACCTTCACAGACATCGGCAACAGCCTGGCGCATGT...TCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTCCCTGCATCAGCAGCTaGCCCAGGTCGCCGAGATTC +
Preference number: 5 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSPCISS*PRSPRF
Trigger: GAATCTCGGCGACCTGGGCAAGCTGCTGATGCAGGG...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTGCCGCTGCATGGGCTaGAACCTGGCCAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSCRCMG*NLASSF
Trigger: GAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCA...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCGAGACGTTCTGTGTCTaGACAGACAAAGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFETFCV*TDKGRW
Trigger: CCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTC...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CGAGGAACAGCCCACGCCACGGCCTCCACACAGTTTGCCATTTTGGCTCTTTGTGTCAGACACATCAATTaGGTGATCCGTTTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RGTAHATASTQFAILALCVRHIN*VIRFLL
Trigger: AAGGAGGAAACGGATCACCAAATTGATGTGTCTGAC...ACAAAGAGCCAAAATGGCAAACTGTGTGGAGGCCGTGGCGTGGGCTGTTCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS TCA 90 bp CTGGGCTCGCCACAACCCTCTCCTTGTAACAGGACCTTTCTATGCTaGACTTTGTCCCCTAAAATCTGCATGAGGGACCAGCTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: LGSPQPSPCNRTFLC*TLSPKICMRDQLAF
Trigger: AAAAGCCAGCTGGTCCCTCATGCAGATTTTAGGGGACAAAGTTCAGCATAGAAAGGTCCTGTTACAAGGAGAGGGTTGTGGCGAGCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS GCA 90 bp TCCCGAGCATCTCAGACTTGGTGTTCGGAAACATATGGGCTGCTCTaGCTGGGGAAATTGTTTGCAAGTCACATTGGGCTCCCTAAGAGT +
Preference number: 5 (lower is better)
Translates to: SRASQTWCSETYGLL*LGKLFASHIGLPKS
Trigger: ACTCTTAGGGAGCCCAATGTGACTTGCAAACAATTTCCCCAGGCAGAGCAGCCCATATGTTTCCGAACACCAAGTCTGAGATGCTCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp TTCAGTCCCGAGCATCTCAGACTTGGTGTTCGGAAACATATGGGCTaGTCTGCCTGGGGAAATTGTTTGCAAGTCACATTGGGCTCCCTA +
Preference number: 5 (lower is better)
Translates to: FSPEHLRLGVRKHMG*SAWGNCLQVTLGSL
Trigger: TAGGGAGCCCAATGTGACTTGCAAACAATTTCCCCAGGCAGAGCAGCCCATATGTTTCCGAACACCAAGTCTGAGATGCTCGGGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp AAATTGTTTGCAAGTCACATTGGGCTCCCTAAGAGTTCCTTCATCTaGGAAAACTCACACCCAGGCACCAGTGCCTTGGGAGCCCAAGCA +
Preference number: 5 (lower is better)
Translates to: KLFASHIGLPKSSFI*ENSHPGTSALGAQA
Trigger: TGCTTGGGCTCCCAAGGCACTGGTGCCTGGGTGTGAGTTTTCCCAGATGAAGGAACTCTTAGGGAGCCCAATGTGACTTGCAAACAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp TGGGCCCTGCCCACTGCCGGCTTCTTTTCCGTCCCAACAATGACTTACCATGTGGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: WALPTAGFFSVPTMTYHVDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...CACATGGTAAGTCATTGTTGGGACGGAAAAGAAGCCGGCAGTGGGCAGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGTCCATGAGATCTTGGTaGAGGATGGATTCGTATTCC +
Preference number: 5 (lower is better)
Translates to: HASYLIPHPGGLASDGYKSMRSW*RMDSYS
Trigger: GGAATACGAATCCATCCTCAACCAAGATCTCATGGA...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTCGGCAGCACTGGTCCACGCCACACCCTGCAGAAACTGCATCTTTGTATTTTCGTGCTCCATGAGATCTaGGTTGAGGATGGATTCGTA +
Preference number: 5 (lower is better)
Translates to: VGSTGPRHTLQKLHLCIFVLHEI*VEDGFV
Trigger: TACGAATCCATCCTCAACCAAGATCTCATGGAGCAC...GAAAATACAAAGATGCAGTTTCTGCAGGGTGTGGCGTGGACCAGTGCTGCCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GCAGGCACTACTTTTACCTTTCTGACCTTTGAGGTTAGCAAAACCCTGCAGGGTACACCTCCTCCATGCTaGCCTGCTTCTGGAAGACCT +
Preference number: 5 (lower is better)
Translates to: AGTTFTFLTFEVSKTLQGTPPPC*PASGRP
Trigger: AGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGT...ACCCTGCAGGGTTTTGCTAACCTCAAAGGTCAGAAAGGTAAAAGTAGTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp TGTGCACGCTGTCCAGTTCTAGAGAGCAGACTGCCCGCATCCCGTGAGTTAGAAACACGCACAACCTTGTaGCTATTTTGTCATCATCGC +
Preference number: 5 (lower is better)
Translates to: CARCPVLESRLPASRELETRTTL*LFCHHR
Trigger: GCGATGATGACAAAATAGCAACAAGGTTGTGCGTGT...TTCTAACTCACGGGATGCGGGCAGTCTGCTCTCTAGAACTGGACAGCGTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGGGAACACGCACAACCTTGTaGCTATTTTGTCATCATCGC +
Preference number: 5 (lower is better)
Translates to: RHHLMSPTDTFSSTCDQGTRTTL*LFCHHR
Trigger: GCGATGATGACAAAATAGCAACAAGGTTGTGCGTGT...TCCCTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCACCTGTGACCAGTGCCGACTGCCAACTTaGCTGTGTTTTGAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: WRHHLMSPTDTFSSTCDQCRLPT*LCFELY
Trigger: ATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGCA...CTGGTCACAGGTGGATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AACCCCTGCAGACAGCCCCTTGGGATCAACGCCTTAGCCTGGCTTCAACCCATGGCAGGCTTGGAATTTTaGGCCATAAAAATGGAAAGA +
Preference number: 5 (lower is better)
Translates to: NPCRQPLGINALAWLQPMAGLEF*AIKMER
Trigger: TCTTTCCATTTTTATGGCCAAAAATTCCAAGCCTGC...CATGGGTTGAAGCCAGGCTAAGGCGTTGATCCCAAGGGGCTGTCTGCAGGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS CCA 90 bp GAGCATCTCAGACTTGGTGTTCGGAAACATATGGGCTGCTCTGCCTaGGGAAATTGTTTGCAAGTCACATTGGGCTCCCTAAGAGTTCCT +
Preference number: 5 (lower is better)
Translates to: EHLRLGVRKHMGCSA*GNCLQVTLGSLRVP
Trigger: AGGAACTCTTAGGGAGCCCAATGTGACTTGCAAACAATTTCCCCAGGCAGAGCAGCCCATATGTTTCCGAACACCAAGTCTGAGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp GCATATTCAGTCCCGAGCATCTCAGACTTGGTGTTCGGAAACATATaGGCTGCTCTGCCTGGGGAAATTGTTTGCAAGTCACATTGGGCT +
Preference number: 5 (lower is better)
Translates to: AYSVPSISDLVFGNI*AALPGEIVCKSHWA
Trigger: AGCCCAATGTGACTTGCAAACAATTTCCCCAGGCAGAGCAGCCCATATGTTTCCGAACACCAAGTCTGAGATGCTCGGGACTGAATATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACTCTGCTCCTCTGCACTaGACCAGCCCCCGTCGTCCT +
Preference number: 5 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHSAPLH*TSPRRP
Trigger: AGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGA...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATTTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATC +
Preference number: 5 (lower is better)
Translates to: PNNLHIRGKAAESLHASYFTEVH*SRRRSI
Trigger: GATAGACCGGCGACGGGACAAATGGACCTCCGTGAA...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGGTTTCTGCTGATGCTTaGCCCAGAACTCATCGAAGG +
Preference number: 5 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLVSADA*PRTHRR
Trigger: CCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAAC...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CACTCCTTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAACCATGTACCTTCGCCTaGTCCTTCTTCTCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: HSFYSVLVGEVAELIAIKPCTFA*SFFSVC
Trigger: GCACACAGAGAAGAAGGACAAGGCGAAGGTACATGG...TTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAAGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS TCA 90 bp CTATACAATGACGCAGTCATCAATCGTGCATTTCAAGGCTCAGCCTaGCTTAATCTCACAGGCTCCACCTGGCAAGCGGAGACTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LYNDAVINRAFQGSA*LNLTGSTWQAETFL
Trigger: CAGAAAAGTCTCCGCTTGCCAGGTGGAGCCTGTGAGATTAAGTCAGGCTGAGCCTTGAAATGCACGATTGATGACTGCGTCATTGTATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464800.5
CDS CCA 90 bp CAGACACATCAATTTGGTGATCCGTTTCCTCCTTTTTGGCCTCATTaGGCCGTTGTGGGGAAGAATAACTGTTGCTTCCAGGTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: QTHQFGDPFPPFWPH*AVVGKNNCCFQVSC
Trigger: GCAAGAGACCTGGAAGCAACAGTTATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGATCACCAAATTGATGTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS-3UTR CAA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTCCTTGAGTTTCCTCTaGAGGGACTGGTGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSSLSFL*RDWCWS
Trigger: CGACCAGCACCAGTCCCTCAAGAGGAAACTCAAGGA...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CATGCTTCCTATTTGATTCCGCACCCTGGAGGTCTGGCCAGTGACGGCTACAAGTCATCTCTATTGAATTaGAAAGCGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: HASYLIPHPGGLASDGYKSSLLN*KAMSER
Trigger: TCTCTCCGACATCGCTTTCAAATTCAATAGAGATGA...CTTGTAGCCGTCACTGGCCAGACCTCCAGGGTGCGGAATCAAATAGGAAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TTGCCACGCAGCCCCCTTTACTCTATGAACTGTCCTGAATCCCATTTCAGGTCAGTGCTCCATGAGATCTaGGTTGAGGATGGATTCGTA +
Preference number: 5 (lower is better)
Translates to: LPRSPLYSMNCPESHFRSVLHEI*VEDGFV
Trigger: TACGAATCCATCCTCAACCAAGATCTCATGGAGCAC...TGACCTGAAATGGGATTCAGGACAGTTCATAGAGTAAAGGGGGCTGCGTGGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTACACCTCCTCCATGCTaGCCTGCTTCTGGAAGACCT +
Preference number: 5 (lower is better)
Translates to: MNCPESHFRSSILLHQLSTPPPC*PASGRP
Trigger: AGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGT...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCTTGGTGTGGCCCCTCTaGTGGTCGGTCCAGACGCTG +
Preference number: 5 (lower is better)
Translates to: ICRLDTERASKVLNRICFLVWPL*WSVQTL
Trigger: CAGCGTCTGGACCGACCACAAGAGGGGCCACACCAA...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CTGCTTTTGGTGGTGGAGACACCACCTGATGTCACCCACGGACACGTTTTCATCCTGACACGCACAACCTaGTTGCTATTTTGTCATCAT +
Preference number: 5 (lower is better)
Translates to: LLLVVETPPDVTHGHVFILTRTT*LLFCHH
Trigger: ATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAG...GATGAAAACGTGTCCGTGGGTGACATCAGGTGGTGTCTCCACCACCAAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TTTTATTCCGTTCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATAAGCCTGCTGACTTCTaGGTCTTACGTGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: FYSVLVGEVAELIAIKRHKPADF*VLRAAD
Trigger: GTCAGCAGCACGTAAGACCAAGAAGTCAGCAGGCTT...ATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGAACGGAATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CAA 90 bp GAGTTTAAGGAGTGTGAGAGTGTAGACACAGCAGGCCTGGATTCCCAGCAGACCGCTGAAAGTCTTTATTaGTTGGCACAAGAGGCATCA +
Preference number: 5 (lower is better)
Translates to: EFKECESVDTAGLDSQQTAESLY*LAQEAS
Trigger: TGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGC...GGTCTGCTGGGAATCCAGGCCTGCTGTGTCTACACTCTCACACTCCTTAAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS CCA 90 bp CTGGAAATCTTCCATCCTCTCCAGAAAGCATCTTCCAACCAGTTCTaGGCAGTCAGTGTAGTTTTCCAGCTCCCTGAGGAATATCCTGTT +
Preference number: 5 (lower is better)
Translates to: LEIFHPLQKASSNQF*AVSVVFQLPEEYPV
Trigger: AACAGGATATTCCTCAGGGAGCTGGAAAACTACACTGACTGCCCAGAACTGGTTGGAAGATGCTTTCTGGAGAGGATGGAAGATTTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTCTGCATGCTTCCTATTaGATTCCGCACCCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: MNCPESHFRSSILLHQLSLHASY*IPHPGG
Trigger: ACCTCCAGGGTGCGGAATCAAATAGGAAGCATGCAG...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCTCGTCGGAGAGGTTGCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGCTCATCTCTATTGAATTaGAAAGCGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: SRRRGCRANCHQKASQACSSLLN*KAMSER
Trigger: TCTCTCCGACATCGCTTTCAAATTCAATAGAGATGA...GCAGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGCAACCTCTCCGACGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS-3UTR CAA 90 bp AAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCGACTGCCAACTAAATCCTCCTTCGCCTaGTCCTTCTTCTCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: KQGSLFMTVNIAVCRLPTKSSFA*SFFSVC
Trigger: GCACACAGAGAAGAAGGACAAGGCGAAGGAGGATTT...AGTTGGCAGTCGGCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGAACCTTGTTGCTATTTaGTCATCATCGCCGTCTGAC +
Preference number: 5 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLNLVAI*SSSPSD
Trigger: GTCAGACGGCGATGATGACAAAATAGCAACAAGGTT...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCCTTGAGGTCAAGAGCTaGAGACCAGCCTGGACAACA +
Preference number: 5 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGLEVKS*RPAWTT
Trigger: TGTTGTCCAGGCTGGTCTCAAGCTCTTGACCTCAAG...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS TCA 90 bp AGGATGGAGATAAATTATGCAGTCTATGGGCGTGGCCGCTCTCTGTaGGCATCATTAACAAGCCAGGGATTTATATCGGGTGTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: RMEINYAVYGRGRSL*ASLTSQGFISGVSD
Trigger: ATCTGAGACACCCGATATAAATCCCTGGCTTGTTAATGATGCTCACAGAGAGCGGCCACGCCCATAGACTGCATAATTTATCTCCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 90 bp TGGTGCATGATTTCATCCGTGTGCTTGGAAACCGCATTTAATCTCTaGACCATTTCTTCCAAGGCCATCTCTTCAGTCCTCAGCCAAAAC +
Preference number: 5 (lower is better)
Translates to: WCMISSVCLETAFNL*TISSKAISSVLSQN
Trigger: GTTTTGGCTGAGGACTGAAGAGATGGCCTTGGAAGAAATGGTGCAGAGATTAAATGCGGTTTCCAAGCACACGGATGAAATCATGCACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS CCA 90 bp AATTTGGTGATCCGTTTCCTCCTTTTTGGCCTCATTGGGCCGTTGTaGGGAAGAATAACTGTTGCTTCCAGGTCTCTTGCACAGGATAAA +
Preference number: 5 (lower is better)
Translates to: NLVIRFLLFGLIGPL*GRITVASRSLAQDK
Trigger: TTTATCCTGTGCAAGAGACCTGGAAGCAACAGTTATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGATCACCAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS-3UTR CAA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGATTCCTGGTGAAGAATaGAGGCCAAAGTACCACAAA +
Preference number: 5 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLIPGEE*RPKYHK
Trigger: TTTGTGGTACTTTGGCCTCAATTCTTCACCAGGAAT...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ATGATCACGTCTGTTGTGAGCCAGACACATCTGGGCTGTCTCTTCCGTTACATGCAGTTCTGCTGTGACTaGAATAAAATACTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: MITSVVSQTHLGCLFRYMQFCCD*NKILSP
Trigger: TGGGGAGAGTATTTTATTCAAGTCACAGCAGAACTG...CATGTAACGGAAGAGACAGCCCAGATGTGTCTGGCTCACAACAGACGTGATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTATAAATCCTCCTTCGCCTaGTCCTTCTTCTCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: PNNLHIRGKAAESLHASYKSSFA*SFFSVC
Trigger: GCACACAGAGAAGAAGGACAAGGCGAAGGAGGATTT...ATAGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTGAGACGTTCTGTGTCTaGACAGACAAAGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLETFCV*TDKGRW
Trigger: CCATCTGCCTTTGTCTGTCAAGACACAGAACGTCTC...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CATCGCGGGACACAGCACGCGTTCCAAATAACTTACACATCAGAGGAAAAGCTGCTGACACGCACAACCTaGTTGCTATTTTGTCATCAT +
Preference number: 5 (lower is better)
Translates to: HRGTQHAFQITYTSEEKLLTRTT*LLFCHH
Trigger: ATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAG...CAGCTTTTCCTCTGATGTGTAAGTTATTTGGAACGCGTGCTGTGTCCCGCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTTCTCTAAGCAGTGACTaGTCACGTCTGATCCGATGC +
Preference number: 5 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPSLSSD*SRLIRC
Trigger: GCATCGGATCAGACGTGACAAGTCACTGCTTAGAGA...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACAGAAAATGCCAAGCATaGACCGCCTGTGCTGCGATG +
Preference number: 5 (lower is better)
Translates to: RAESLYLLAQEASGKEKHRKCQA*TACAAM
Trigger: CATCGCAGCACAGGCGGTCAATGCTTGGCATTTTCT...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTGTGCTCCATGAGATCTaGGTTGAGGATGGATTCGTA +
Preference number: 5 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPVLHEI*VEDGFV
Trigger: TACGAATCCATCCTCAACCAAGATCTCATGGAGCAC...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CAAAAACCTGACTGGAATAAGACCTTGAAACAGCACGACTGGCCACGTCTATCTGAAAGTCTTTATTTGTaGGCACAAGAGGCATCAGGG +
Preference number: 5 (lower is better)
Translates to: QKPDWNKTLKQHDWPRLSESLYL*AQEASG
Trigger: CCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTC...AGATAGACGTGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTCAGGTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS TCA 90 bp ATTTACTTCTTGAGTCTGAGCACTTTGACGACTTTTTCTGAACTGTaGGACACAGTGGGTACAGGGAATCTTACTTCCCGTGTAGACCTG +
Preference number: 5 (lower is better)
Translates to: IYFLSLSTLTTFSEL*DTVGTGNLTSRVDL
Trigger: CAGGTCTACACGGGAAGTAAGATTCCCTGTACCCACTGTGTCTCACAGTTCAGAAAAAGTCGTCAAAGTGCTCAGACTCAAGAAGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp ATCAGAATTCTGCAGGATGGAGATAAATTATGCAGTCTATGGGCGTaGCCGCTCTCTGTGAGCATCATTAACAAGCCAGGGATTTATATC +
Preference number: 5 (lower is better)
Translates to: IRILQDGDKLCSLWA*PLSVSIINKPGIYI
Trigger: GATATAAATCCCTGGCTTGTTAATGATGCTCACAGAGAGCGGCCACGCCCATAGACTGCATAATTTATCTCCATCCTGCAGAATTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 90 bp ATGAAAATCAGAATTCTGCAGGATGGAGATAAATTATGCAGTCTATaGGCGTGGCCGCTCTCTGTGAGCATCATTAACAAGCCAGGGATT +
Preference number: 5 (lower is better)
Translates to: MKIRILQDGDKLCSL*AWPLSVSIINKPGI
Trigger: AATCCCTGGCTTGTTAATGATGCTCACAGAGAGCGGCCACGCCCATAGACTGCATAATTTATCTCCATCCTGCAGAATTCTGATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS-3UTR CAA 90 bp GCAGGCACTACTTTTACCTTTCTGACCTTTGAGGTTAGCAAAACCCTGCAGGGTTCATCTCTATTGAATTaGAAAGCGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: AGTTFTFLTFEVSKTLQGSSLLN*KAMSER
Trigger: TCTCTCCGACATCGCTTTCAAATTCAATAGAGATGA...ACCCTGCAGGGTTTTGCTAACCTCAAAGGTCAGAAAGGTAAAAGTAGTGCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375597.8
CDS-3UTR CAA 90 bp AGACACATCTGGGCTGTCTCTTCCGTTACATGTTGTTTCCTGTTAACCATGCTTTCCATGAGATCTTGGTaGAGGATGGATTCGTATTCC +
Preference number: 5 (lower is better)
Translates to: RHIWAVSSVTCCFLLTMLSMRSW*RMDSYS
Trigger: GGAATACGAATCCATCCTCAACCAAGATCTCATGGA...AAGCATGGTTAACAGGAAACAACATGTAACGGAAGAGACAGCCCAGATGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCTGTTGTGAAGGCCTGTaGACAGGAGGTGAGCCATCA +
Preference number: 5 (lower is better)
Translates to: ICRLDTERASKVLNRICFCCEGL*TGGEPS
Trigger: TGATGGCTCACCTCCTGTCAACAGGCCTTCACAACA...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GGTGCACACATACAAAAACATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTATTTCAGCATTTCCTaGAGCAGCAGCTGGTACTTG +
Preference number: 5 (lower is better)
Translates to: GAHIQKHLQTRHRKGFKSYFSIS*SSSWYL
Trigger: CAAGTACCAGCTGCTGCTCAAGGAAATGCTGAAATA...ACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGATGTTTTTGTATGTGTGCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCCAACTTTGCTGTGTTTaGAGCTTTATAGTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCQLCCV*SFIVSG
Trigger: GCCACTGACTATAAAGCTCAAAACACAGCAAAGTTG...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CCAGGGAGAATTATGATCTCAACAACTAAATCATTTCCAAACCCTTACTGCTGTGGCCTCATTGGGCCGTaGTGGGGAAGAATAACTGTT +
Preference number: 5 (lower is better)
Translates to: PGRIMISTTKSFPNPYCCGLIGP*WGRITV
Trigger: AACAGTTATTCTTCCCCACAACGGCCCAATGAGGCC...ACAGCAGTAAGGGTTTGGAAATGATTTAGTTGTTGAGATCATAATTCTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp CCAGGGAGAATTATGATCTCAACAACTAAATCATTTCCAAACCCTTACTGCTGTTCCGTTTCCTCCTTTTaGGCCTCATTGGGCCGTTGT +
Preference number: 5 (lower is better)
Translates to: PGRIMISTTKSFPNPYCCSVSSF*ASLGRC
Trigger: ACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGA...ACAGCAGTAAGGGTTTGGAAATGATTTAGTTGTTGAGATCATAATTCTCCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp AGAGCTGAAAGTCTTTATTTGTTGGCACAAGAGGCATCAGGGAAAGAGAAACACGGAGGATTCTCCCATTaGTGCAGTTCAGTTAGAGCT +
Preference number: 5 (lower is better)
Translates to: RAESLYLLAQEASGKEKHGGFSH*CSSVRA
Trigger: AGCTCTAACTGAACTGCACAAATGGGAGAATCCTCC...GTGTTTCTCTTTCCCTGATGCCTCTTGTGCCAACAAATAAAGACTTTCAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp GTTTACTCGGAGCTGATGAAATCCAGAGATGTCATACGAAATGCATGTAGAGTTGACTGGAATAAGACCTaGAAACAGCACGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: VYSELMKSRDVIRNACRVDWNKT*KQHDWP
Trigger: TGGCCAGTCGTGCTGTTTCAAGGTCTTATTCCAGTC...AACTCTACATGCATTTCGTATGACATCTCTGGATTTCATCAGCTCCGAGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS-3UTR CAA 90 bp ATCTGCAGACTAGACACCGAAAGGGCTTCAAAAGTTTTGAACAGAATATGTTTCAGTGAGTGGGACGTTTaGCTCCAACCTTTGCCCTTT +
Preference number: 5 (lower is better)
Translates to: ICRLDTERASKVLNRICFSEWDV*LQPLPF
Trigger: AAAGGGCAAAGGTTGGAGCAAAACGTCCCACTCACT...GAAACATATTCTGTTCAAAACTTTTGAAGCCCTTTCGGTGTCTAGTCTGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ACGTTTAGGGGCAAACAGGGATCACTTTTCATGACAGTCAACATTGCTGTCTGCTCATCTCTATTGAATTaGAAAGCGATGTCGGAGAGA +
Preference number: 5 (lower is better)
Translates to: TFRGKQGSLFMTVNIAVCSSLLN*KAMSER
Trigger: TCTCTCCGACATCGCTTTCAAATTCAATAGAGATGA...GCAGACAGCAATGTTGACTGTCATGAAAAGTGATCCCTGTTTGCCCCTAAACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp ATGAACTGTCCTGAATCCCATTTCAGGTCATCGATACTGCTACACCAGCTTTCTCTGACACGCACAACCTaGTTGCTATTTTGTCATCAT +
Preference number: 5 (lower is better)
Translates to: MNCPESHFRSSILLHQLSLTRTT*LLFCHH
Trigger: ATGATGACAAAATAGCAACAAGGTTGTGCGTGTCAG...AGAAAGCTGGTGTAGCAGTATCGATGACCTGAAATGGGATTCAGGACAGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TTCCAAATAACTTACACATCAGAGGAAAAGCTGCCGAGTCTCTGCATGCTTCCTCAACTTTGCTGTGTTTaGAGCTTTATAGTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: FQITYTSEEKLPSLCMLPQLCCV*SFIVSG
Trigger: GCCACTGACTATAAAGCTCAAAACACAGCAAAGTTG...AGGAAGCATGCAGAGACTCGGCAGCTTTTCCTCTGATGTGTAAGTTATTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp GTCATCGATACTGCTACACCAGCTTTCTTATGGTGTTTGTCTGTTCTGTCTTCTTGCCGACTGCCAACTTaGCTGTGTTTTGAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: VIDTATPAFLWCLSVLSSCRLPT*LCFELY
Trigger: ATAAAGCTCAAAACACAGCAAAGTTGGCAGTCGGCA...AGAAGACAGAACAGACAAACACCATAAGAAAGCTGGTGTAGCAGTATCGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375604.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp CTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCCACTGAGTTTCCAGGTTTTCATTaGCTGGTCAGTCTTCTTGGT +
Preference number: 5 (lower is better)
Translates to: LQRDSSSWLLDSPPNATEFPGFH*LVSLLG
Trigger: ACCAAGAAGACTGACCAGCAAATGAAAACCTGGAAA...CTCAGTGGCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp AGTTTTAAGGTTCAGGTAGTAAAATCTCTTCATTTCGTGGCCAGGCACAGTGGCCTTACTGCTGTAATTTaGCTTTCCTGCAAGTGTTCA +
Preference number: 5 (lower is better)
Translates to: SFKVQVVKSLHFVARHSGLTAVI*LSCKCS
Trigger: TGAACACTTGCAGGAAAGCAAAATTACAGCAGTAAG...GCCACTGTGCCTGGCCACGAAATGAAGAGATTTTACTACCTGAACCTTAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS-3UTR CAA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACGATAAAGGAATCTCCTaGGCTTCTAACTGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHDKGIS*ASNCFW
Trigger: CCAAAAGCAGTTAGAAGCCAAGGAGATTCCTTTATC...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000453297.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCATTTCATGTAAACACAGTGATTCCTGGTGAAGAATTGAGGCCAAAGTACCACCAGTTCTGCTGTGACTaGAATAAAATACTCTCCCCA +
Preference number: 5 (lower is better)
Translates to: SFHVNTVIPGEELRPKYHQFCCD*NKILSP
Trigger: TGGGGAGAGTATTTTATTCAAGTCACAGCAGAACTG...GTGGTACTTTGGCCTCAATTCTTCACCAGGAATCACTGTGTTTACATGAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000397017.6
ENST00000397030.5
ENST00000535094.7
CDS-3UTR CAA 90 bp TCAGATCCTTCAAAGAGATTCATCCTCTTGGTTATTAGACTCTCCTCCAAATGCAAAGAGAAAGAGACCTaGTGGTCAGCATTACATTTC +
Preference number: 5 (lower is better)
Translates to: SDPSKRFILLVIRLSSKCKEKET*WSALHF
Trigger: GAAATGTAATGCTGACCACAAGGTCTCTTTCTCTTT...GCATTTGGAGGAGAGTCTAATAACCAAGAGGATGAATCTCTTTGAAGGATCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS GCA 72 bp TCGGGTCTGGGGGCCACCGGCTGCACGGGCCGCGTCTaGCTGGCCGCCAGCTTCTTCAGGCTGGCCTGCCTG +
Preference number: 6 (lower is better)
Translates to: SGLGATGCTGRV*LAASFFRLACL
Trigger: CAGGCAGGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCAGCCGGTGGCCCCCAGACCCGA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp GTCTGGGGGCCACCGGCTGCACGGGCCGCGTCTGCCTaGCCGCCAGCTTCTTCAGGCTGGCCTGCCTGCGGT +
Preference number: 6 (lower is better)
Translates to: VWGPPAARAASA*PPASSGWPACG
Trigger: ACCGCAGGCAGGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCAGCCGGTGGCCCCCAGAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp CCGCGCCGCGCCCAGGTAAGCAGGTCCGTGGGTCGCTaGGTCCATGCGTGGGTCCGTGGCTGGCCGGGGATG +
Preference number: 6 (lower is better)
Translates to: PRRAQVSRSVGR*VHAWVRGWPGM
Trigger: CATCCCCGGCCAGCCACGGACCCACGCATGGACCCAGCGACCCACGGACCTGCTTACCTGGGCGCGGCGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS GCA 72 bp AGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTTaGTCAGCACGGCCGACCCCGGGCTCGACTCTGAGC +
Preference number: 6 (lower is better)
Translates to: RGPGRPRCSWTS*SARPTPGSTLS
Trigger: GCTCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000469415.1
ENST00000488765.1
ENST00000535094.7
CDS GCA 72 bp CCCGGCACAGCAGTGACAGCCGGCGCACCGTCATGCTaGCCAGTGCGAGTCAGGAGCCCCCGACCCGGCTCC +
Preference number: 6 (lower is better)
Translates to: PGTAVTAGAPSC*PVRVRSPRPGS
Trigger: GGAGCCGGGTCGGGGGCTCCTGACTCGCACTGGGCAGCATGACGGTGCGCCGGCTGTCACTGCTGTGCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000486210.1
CDS GCA 72 bp GGTCCCGGCACAGCAGTGACAGCCGGCGCACCGTCATaGTGCCCAGTGCGAGTCAGGAGCCCCCGACCCGGC +
Preference number: 6 (lower is better)
Translates to: GPGTAVTAGAPS*CPVRVRSPRPG
Trigger: GCCGGGTCGGGGGCTCCTGACTCGCACTGGGCAGCATGACGGTGCGCCGGCTGTCACTGCTGTGCCGGGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000486210.1
CDS GCA 72 bp CGGACAGCCTTTCCGTCCCCCATGGCGAGGATCAGCTaGCGGGGAGGACGCGCGCTGCCCTGGGCTCGCCAC +
Preference number: 6 (lower is better)
Translates to: RTAFPSPMARIS*RGGRALPWARH
Trigger: GTGGCGAGCCCAGGGCAGCGCGCGTCCTCCCCGGCAGCTGATCCTCGCCATGGGGGACGGAAAGGCTGTCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS GCA 72 bp GACTTTGCCAGTGCCTCGGGTCTGGGGGCCACCGGCTaGACGGGCCGCGTCTGCCTGGCCGCCAGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: DFASASGLGATG*TGRVCLAASFF
Trigger: GAAGAAGCTGGCGGCCAGGCAGACGCGGCCCGTGCAGCCGGTGGCCCCCAGACCCGAGGCACTGGCAAAGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 72 bp GGCCGGGCGCAGGGCAGAGCCCCGGGTGGCACTTACTaGGATGCGCAGGACGGACGCCTTCACGGAGGTCCA +
Preference number: 6 (lower is better)
Translates to: GRAQGRAPGGTY*DAQDGRLHGGP
Trigger: TGGACCTCCGTGAAGGCGTCCGTCCTGCGCATCGCAGTAAGTGCCACCCGGGGCTCTGCCCTGCGCCCGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp CCGCGAAGCGGGGACGCCACACCTTCCTGGGTTTGCTaGGCAGACCTGGCCTCTGCAGGGCAGCCAGCCGGC +
Preference number: 6 (lower is better)
Translates to: PRSGDATPSWVC*ADLASAGQPAG
Trigger: GCCGGCTGGCTGCCCTGCAGAGGCCAGGTCTGCCCAGCAAACCCAGGAAGGTGTGGCGTCCCCGCTTCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS CCA 72 bp GTGTTGGGCGGGAGGGGCTCACCGCCTCTGCGACACTaGCGGGCTCTGGTGGGCCCCGCAAAGGCATCACCC +
Preference number: 6 (lower is better)
Translates to: VLGGRGSPPLRH*RALVGPAKASP
Trigger: GGGTGATGCCTTTGCGGGGCCCACCAGAGCCCGCCAGTGTCGCAGAGGCGGTGAGCCCCTCCCGCCCAACAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp AAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCCGGGCTCGACTCTGAG +
Preference number: 6 (lower is better)
Translates to: KGAWPPSLQLDE*LSTADPGLDSE
Trigger: CTCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000469415.1
ENST00000488765.1
ENST00000535094.7
CDS CAA 90 bp AGGTCGGAGAAGGGGGCCTGGCCGCCCTCGCTGCAGCTGGACGAGTaGCTCAGCACGGCCGACCCCGGGCTCGACTCTGAGCTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: RSEKGAWPPSLQLDE*LSTADPGLDSELLR
Trigger: CCTGAGCAGCTCAGAGTCGAGCCCGGGGTCGGCCGTGCTGAGCAACTCGTCCAGCTGCAGCGAGGGCGGCCAGGCCCCCTTCTCCGACCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000453297.5
ENST00000469415.1
ENST00000488765.1
ENST00000535094.7
CDS TCA 72 bp CAGCAGCCACAGCGCCCAGAGGTCCCGGCACAGCAGTaGCAGCCGGCGCACCGTCATGCTGCCCAGTGCGAG +
Preference number: 6 (lower is better)
Translates to: QQPQRPEVPAQQ*QPAHRHAAQCE
Trigger: CTCGCACTGGGCAGCATGACGGTGCGCCGGCTGTCACTGCTGTGCCGGGACCTCTGGGCGCTGTGGCTGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000397024.1
ENST00000486210.1
CDS GCA 72 bp CCGGCACAGCGGCACCGAACCGGAAGGCTGAGACCATaGAGGTGCCGCGGTGGAGATGGGCTCCCATCGGCC +
Preference number: 6 (lower is better)
Translates to: PAQRHRTGRLRP*RCRGGDGLPSA
Trigger: GGCCGATGGGAGCCCATCTCCACCGCGGCACCTGCATGGTCTCAGCCTTCCGGTTCGGTGCCGCTGTGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 72 bp GGTAGGGCCCTCTCCGGAGCGCACCGCCCTCGGAGCTaGAGTTCTCAGAGCCTCGCCGAATGCCTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: GRALSGAHRPRS*SSQSLAECLGR
Trigger: CCTCCCCAGGCATTCGGCGAGGCTCTGAGAACTCCAGCTCCGAGGGCGGTGCGCTCCGGAGAGGGCCCTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp CAGGTAAGCAGGTCCGTGGGTCGCTGGGTCCATGCGTaGGTCCGTGGCTGGCCGGGGATGGACCAGCCCCTC +
Preference number: 6 (lower is better)
Translates to: QVSRSVGRWVHA*VRGWPGMDQPL
Trigger: GAGGGGCTGGTCCATCCCCGGCCAGCCACGGACCCACGCATGGACCCAGCGACCCACGGACCTGCTTACCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS CCA 72 bp CCGCCACGGAAATCCGGACAGCCTTTCCGTCCCCCATaGCGAGGATCAGCTGCCGGGGAGGACGCGCGCTGC +
Preference number: 6 (lower is better)
Translates to: PPRKSGQPFRPP*RGSAAGEDARC
Trigger: GCAGCGCGCGTCCTCCCCGGCAGCTGATCCTCGCCATGGGGGACGGAAAGGCTGTCCGGATTTCCGTGGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS CCA 72 bp GGAGGGGCTCACCGCCTCTGCGACACTGGCGGGCTCTaGTGGGCCCCGCAAAGGCATCACCCTGGACAGGTG +
Preference number: 6 (lower is better)
Translates to: GGAHRLCDTGGL*WAPQRHHPGQV
Trigger: CACCTGTCCAGGGTGATGCCTTTGCGGGGCCCACCAGAGCCCGCCAGTGTCGCAGAGGCGGTGAGCCCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp ACGCAGCGTCTTCCCGGCCCTGCGAGGCATTGCTGCTaGCCCCATAGCTTCCGAGGGCCGGCACTGGCTCCC +
Preference number: 6 (lower is better)
Translates to: TQRLPGPARHCC*PHSFRGPALAP
Trigger: GGGAGCCAGTGCCGGCCCTCGGAAGCTATGGGGCCAGCAGCAATGCCTCGCAGGGCCGGGAAGACGCTGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487354.1
CDS CAA 72 bp GCTGGTCTCCACACACAGCTCTCGGCCCCAGGGCCTTaGCGCCTGCATACCCGCCTCCCGGAGGGCCCTTCC +
Preference number: 6 (lower is better)
Translates to: AGLHTQLSAPGP*RLHTRLPEGPS
Trigger: GGAAGGGCCCTCCGGGAGGCGGGTATGCAGGCGCAAAGGCCCTGGGGCCGAGAGCTGTGTGTGGAGACCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 72 bp CCTGGCCACGACCAGCTCCGGGGAAGGGCTCCAGCCTaGGGAGGAGGCTACGCCGCAGGGCATGACTACCGC +
Preference number: 6 (lower is better)
Translates to: PGHDQLRGRAPA*GGGYAAGHDYR
Trigger: GCGGTAGTCATGCCCTGCGGCGTAGCCTCCTCCCAAGGCTGGAGCCCTTCCCCGGAGCTGGTCGTGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 90 bp GTGGGAGCTCCTGGCCACGACCAGCTCCGGGGAAGGGCTCCAGCCTaGGGAGGAGGCTACGCCGCAGGGCATGACTACCGCAGCGGCGAT +
Preference number: 6 (lower is better)
Translates to: VGAPGHDQLRGRAPA*GGGYAAGHDYRSGD
Trigger: ATCGCCGCTGCGGTAGTCATGCCCTGCGGCGTAGCCTCCTCCCAAGGCTGGAGCCCTTCCCCGGAGCTGGTCGTGGCCAGGAGCTCCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 90 bp AGCACCATCTTGGCCGCGAAGCGGGGACGCCACACCTTCCTGGGTTaGCTGGGCAGACCTGGCCTCTGCAGGGCAGCCAGCCGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: STILAAKRGRHTFLG*LGRPGLCRAASRLL
Trigger: GAGCAGCCGGCTGGCTGCCCTGCAGAGGCCAGGTCTGCCCAGCAAACCCAGGAAGGTGTGGCGTCCCCGCTTCGCGGCCAAGATGGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375604.6
CDS CAA 90 bp GCCCCTCACGCTGGTCTCCACACACAGCTCTCGGCCCCAGGGCCTTaGCGCCTGCATACCCGCCTCCCGGAGGGCCCTTCCGTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: APHAGLHTQLSAPGP*RLHTRLPEGPSVLS
Trigger: TGAAAGCACGGAAGGGCCCTCCGGGAGGCGGGTATGCAGGCGCAAAGGCCCTGGGGCCGAGAGCTGTGTGTGGAGACCAGCGTGAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS TCA 72 bp AGTAGCCCCCGGCACAGCGGCACCGAACCGGAAGGCTaGGACCATGCAGGTGCCGCGGTGGAGATGGGCTCC +
Preference number: 6 (lower is better)
Translates to: SSPRHSGTEPEG*DHAGAAVEMGS
Trigger: GGAGCCCATCTCCACCGCGGCACCTGCATGGTCTCAGCCTTCCGGTTCGGTGCCGCTGTGCCGGGGGCTACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 72 bp GTGCTGGTCGGGGCCGGCAGGGGCAGGCTCTGTGACTaGTCCAGCGCCCGGTGCTGGCTGGCTTCTCTACAA +
Preference number: 6 (lower is better)
Translates to: VLVGAGRGRLCD*SSARCWLASLQ
Trigger: TTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCCCCTGCCGGCCCCGACCAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000261963.11
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000439475.1
ENST00000453297.5
ENST00000535094.7
CDS GCA 72 bp TTTCATCTCCGGCCGCCCCGTGGCAGGTGTAGAAGCTaGAGAGGCCGCAGCAGCCCAGCGCGCCCCTTCCGT +
Preference number: 6 (lower is better)
Translates to: FHLRPPRGRCRS*RGRSSPARPFR
Trigger: ACGGAAGGGGCGCGCTGGGCTGCTGCGGCCTCTGCAGCTTCTACACCTGCCACGGGGCGGCCGGAGATGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS GCA 72 bp CAGCGGCACCGAACCGGAAGGCTGAGACCATGCAGGTaGCGCGGTGGAGATGGGCTCCCATCGGCCACGCAG +
Preference number: 6 (lower is better)
Translates to: QRHRTGRLRPCR*RGGDGLPSATQ
Trigger: CTGCGTGGCCGATGGGAGCCCATCTCCACCGCGGCACCTGCATGGTCTCAGCCTTCCGGTTCGGTGCCGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 72 bp CGCATCACGCAGCGTCTTCCCGGCCCTGCGAGGCATTaGTGCTGGCCCCATAGCTTCCGAGGGCCGGCACTG +
Preference number: 6 (lower is better)
Translates to: RITQRLPGPARH*CWPHSFRGPAL
Trigger: CAGTGCCGGCCCTCGGAAGCTATGGGGCCAGCAGCAATGCCTCGCAGGGCCGGGAAGACGCTGCGTGATGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487354.1
CDS CCA 72 bp CGGCTCCCGGAACGCCCTTCCCGGGCACACAAAGGATaGCGCAGCACCAGCACCATCTTGGCCGCGAAGCGG +
Preference number: 6 (lower is better)
Translates to: RLPERPSRAHKG*RSTSTILAAKR
Trigger: CCGCTTCGCGGCCAAGATGGTGCTGGTGCTGCGCCATCCTTTGTGTGCCCGGGAAGGGCGTTCCGGGAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000486210.1
CDS CCA 72 bp CGGGCCGCGTCTGCCTGGCCGCCAGCTTCTTCAGGCTaGCCTGCCTGCGGTGGAACACCTCCTCCATGCTTG +
Preference number: 6 (lower is better)
Translates to: RAASAWPPASSG*PACGGTPPPCL
Trigger: CAAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCCTGAAGAAGCTGGCGGCCAGGCAGACGCGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp CCGAACCGGAAGGCTGAGACCATGCAGGTGCCGCGGTaGAGATGGGCTCCCATCGGCCACGCAGCTCCCAGC +
Preference number: 6 (lower is better)
Translates to: PNRKAETMQVPR*RWAPIGHAAPS
Trigger: GCTGGGAGCTGCGTGGCCGATGGGAGCCCATCTCCACCGCGGCACCTGCATGGTCTCAGCCTTCCGGTTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 72 bp AGAGTGGGGAGATTCACAGCCTCCTGGTGCTGCGTGTaGTGGGCTGCGGAGGGGTGCTGCCGGCTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: RVGRFTASWCCV*WAAEGCCRLQG
Trigger: GCCCTGCAGCCGGCAGCACCCCTCCGCAGCCCACCACACGCAGCACCAGGAGGCTGTGAATCTCCCCACTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 90 bp CGCCCTTCCCGGGCACACAAAGGATGGCGCAGCACCAGCACCATCTaGGCCGCGAAGCGGGGACGCCACACCTTCCTGGGTTTGCTGGGC +
Preference number: 6 (lower is better)
Translates to: RPSRAHKGWRSTSTI*AAKRGRHTFLGLLG
Trigger: GCCCAGCAAACCCAGGAAGGTGTGGCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGCTGCGCCATCCTTTGTGTGCCCGGGAAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375597.8
ENST00000375604.6
CDS GCA 72 bp GGCAGGGGCAGGCTCTGTGACTGCTCCAGCGCCCGGTaGTGGCTGGCTTCTCTACAAGCCTGCAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: GRGRLCDCSSAR*WLASLQACSWL
Trigger: CAGCCAGCTGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGCGCTGGAGCAGTCACAGAGCCTGCCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000261963.11
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000439475.1
ENST00000453297.5
ENST00000535094.7
CDS GCA 72 bp GCTGCAGCCACGAAAAAGGCGCCCGATGCCACTGGATaGCGCCCGGCCTGCCTGTGTGGGGCTTCCACTCAC +
Preference number: 6 (lower is better)
Translates to: AAATKKAPDATG*RPACLCGASTH
Trigger: GTGAGTGGAAGCCCCACACAGGCAGGCCGGGCGGCATCCAGTGGCATCGGGCGCCTTTTTCGTGGCTGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp TCCACACACAGCTCTCGGCCCCAGGGCCTTTGCGCCTaGATACCCGCCTCCCGGAGGGCCCTTCCGTGCTTT +
Preference number: 6 (lower is better)
Translates to: STHSSRPQGLCA*IPASRRALPCF
Trigger: AAAGCACGGAAGGGCCCTCCGGGAGGCGGGTATGCAGGCGCAAAGGCCCTGGGGCCGAGAGCTGTGTGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS GCA 72 bp ATCACGCAGCGTCTTCCCGGCCCTGCGAGGCATTGCTaGTGGCCCCATAGCTTCCGAGGGCCGGCACTGGCT +
Preference number: 6 (lower is better)
Translates to: ITQRLPGPARHC*WPHSFRGPALA
Trigger: AGCCAGTGCCGGCCCTCGGAAGCTATGGGGCCAGCAGCAATGCCTCGCAGGGCCGGGAAGACGCTGCGTGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487354.1
CDS CCA 72 bp GGAACCCAGCTGCCCTCCCTCTTGCCCCAGGCGGCGTaGTCAGAGCTGCCTTTGGACTCCAAGCCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: GTQLPSLLPQAA*SELPLDSKPGS
Trigger: GCTCCCTGGCTTGGAGTCCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCAGCTGGGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp CAGAGGCCCCGAGGGCTCTCCCTACCCTTCCACGCCTaGCTTCTCTGCCCTTCCAGAGCCTCCGGGACCTGT +
Preference number: 6 (lower is better)
Translates to: QRPRGLSLPFHA*LLCPSRASGTC
Trigger: ACAGGTCCCGGAGGCTCTGGAAGGGCAGAGAAGCCAGGCGTGGAAGGGTAGGGAGAGCCCTCGGGGCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS TCA 72 bp GGCGGATGGAGTCTACCGCGTAGTGCTTGTTCCCAATaGGCTGCTCGCCGTCCAGAGACAGGGCCCGGGCCC +
Preference number: 6 (lower is better)
Translates to: GGWSLPRSACSQ*AARRPETGPGP
Trigger: GGGCCCGGGCCCTGTCTCTGGACGGCGAGCAGCTCATTGGGAACAAGCACTACGCGGTAGACTCCATCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS TCA 72 bp GCCTTCTGCCCCTGGCAACACACGCCTGTGGGGAGTTaGGCCTTTGAGTGCCTGGGAGGCAGCTGCGTCCGC +
Preference number: 6 (lower is better)
Translates to: AFCPWQHTPVGS*AFECLGGSCVR
Trigger: GCGGACGCAGCTGCCTCCCAGGCACTCAAAGGCTCAACTCCCCACAGGCGTGTGTTGCCAGGGGCAGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS GCA 72 bp ACCCGTCGGGCGAAGCACGAGGACGAGCTGCAGGTTTaGCGGGAAAGATGCTGCGATGCGCAGGACGGACGC +
Preference number: 6 (lower is better)
Translates to: TRRAKHEDELQV*RERCCDAQDGR
Trigger: GCGTCCGTCCTGCGCATCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTCCTCGTGCTTCGCCCGACGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000409954.6
ENST00000421756.5
ENST00000423251.1
ENST00000535094.7
CDS GCA 72 bp ACGCCGTTAAGTGCGCGTCTGCCTCACACCCGGCAGTaGAGGCTGACGCTGCAGCCACGAAAAAGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: TPLSARLPHTRQ*RLTLQPRKRRP
Trigger: CGGGCGCCTTTTTCGTGGCTGCAGCGTCAGCCTGCACTGCCGGGTGTGAGGCAGACGCGCACTTAACGGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp TGCCCTCCCTCTTGCCCCAGGCGGCGTGGTCAGAGCTaGCTTTGGACTCCAAGCCAGGGAGCTGATCCCGGA +
Preference number: 6 (lower is better)
Translates to: CPPSCPRRRGQS*LWTPSQGADPG
Trigger: TCCGGGATCAGCTCCCTGGCTTGGAGTCCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp CAGGCCACGGAGATGGAACCCAGCTGCCCTCCCTCTTaGCCCAGGCGGCGTGGTCAGAGCTGCCTTTGGACT +
Preference number: 6 (lower is better)
Translates to: QATEMEPSCPPS*PRRRGQSCLWT
Trigger: AGTCCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GGCGCAGGGCAGAGCCCCGGGTGGCACTTACTGCGATaGGCAGGACGGACGCCTTCACGGAGGTCCATTTGT +
Preference number: 6 (lower is better)
Translates to: GAGQSPGWHLLR*AGRTPSRRSIC
Trigger: ACAAATGGACCTCCGTGAAGGCGTCCGTCCTGCGCATCGCAGTAAGTGCCACCCGGGGCTCTGCCCTGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp CTCTGCCCTTCCAGAGCCTCCGGGACCTGTCCCCTTTaGACCTCCAGCCTTGGGGCATGGACCACGCACAGC +
Preference number: 6 (lower is better)
Translates to: LCPSRASGTCPL*TSSLGAWTTHS
Trigger: GCTGTGCGTGGTCCATGCCCCAAGGCTGGAGGTGCAAAGGGGACAGGTCCCGGAGGCTCTGGAAGGGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS GCA 72 bp TCCTACAGAGTGGGGAGATTCACAGCCTCCTGGTGCTaGGTGTGGTGGGCTGCGGAGGGGTGCTGCCGGCTG +
Preference number: 6 (lower is better)
Translates to: SYRVGRFTASWC*VWWAAEGCCRL
Trigger: CAGCCGGCAGCACCCCTCCGCAGCCCACCACACGCAGCACCAGGAGGCTGTGAATCTCCCCACTCTGTAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 72 bp CCAAACCACTCAGGGCTCGTGACCTTGGGAGCCCCATaGTCCCCCACCCATGTGGGCAGACAGCCCACTGGC +
Preference number: 6 (lower is better)
Translates to: PNHSGLVTLGAP*SPTHVGRQPTG
Trigger: GCCAGTGGGCTGTCTGCCCACATGGGTGGGGGACCATGGGGCTCCCAAGGTCACGAGCCCTGAGTGGTTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp CCCTCTTGCCCCAGGCGGCGTGGTCAGAGCTGCCTTTaGACTCCAAGCCAGGGAGCTGATCCCGGAGCTCTC +
Preference number: 6 (lower is better)
Translates to: PSCPRRRGQSCL*TPSQGADPGAL
Trigger: GAGAGCTCCGGGATCAGCTCCCTGGCTTGGAGTCCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp CGGGCACACAAAGGATGGCGCAGCACCAGCACCATCTaGGCCGCGAAGCGGGGACGCCACACCTTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: RAHKGWRSTSTI*AAKRGRHTFLG
Trigger: ACCCAGGAAGGTGTGGCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGCTGCGCCATCCTTTGTGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000486210.1
CDS TCA 72 bp GGCTCCAGCCTTGGGAGGAGGCTACGCCGCAGGGCATaGCTACCGCAGCGGCGATGGAAGGCGTCTGTGAAT +
Preference number: 6 (lower is better)
Translates to: GSSLGRRLRRRA*LPQRRWKASVN
Trigger: ATTCACAGACGCCTTCCATCGCCGCTGCGGTAGTCATGCCCTGCGGCGTAGCCTCCTCCCAAGGCTGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS GCA 72 bp CTGGAGGCCGATTCCTGCTCCGCCCTGATGTTTACATaGAGGTCCAGGCGACACACCGTGCCCGCCCGAGAG +
Preference number: 6 (lower is better)
Translates to: LEADSCSALMFT*RSRRHTVPARE
Trigger: CTCTCGGGCGGGCACGGTGTGTCGCCTGGACCTGCATGTAAACATCAGGGCGGAGCAGGAATCGGCCTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS GCA 72 bp CGGTGCCTCCCACATCTGGCTTCTCACGCCGTTAAGTaGGCGTCTGCCTCACACCCGGCAGTGCAGGCTGAC +
Preference number: 6 (lower is better)
Translates to: RCLPHLASHAVK*ASASHPAVQAD
Trigger: GTCAGCCTGCACTGCCGGGTGTGAGGCAGACGCGCACTTAACGGCGTGAGAAGCCAGATGTGGGAGGCACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp TGTTCCTACAGAGTGGGGAGATTCACAGCCTCCTGGTaGTGCGTGTGGTGGGCTGCGGAGGGGTGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: CSYRVGRFTASW*CVWWAAEGCCR
Trigger: CCGGCAGCACCCCTCCGCAGCCCACCACACGCAGCACCAGGAGGCTGTGAATCTCCCCACTCTGTAGGAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 72 bp GGGCACACAAAGGATGGCGCAGCACCAGCACCATCTTaGCCGCGAAGCGGGGACGCCACACCTTCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: GHTKDGAAPAPS*PRSGDATPSWV
Trigger: AACCCAGGAAGGTGTGGCGTCCCCGCTTCGCGGCCAAGATGGTGCTGGTGCTGCGCCATCCTTTGTGTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000486210.1
CDS CCA 72 bp CCCTCTCCACGGCCACGCCTGATTTCTCCTCGAAGCTaGCCAGGTCCCTCAGCAGGTGCTCCACATGCGCCA +
Preference number: 6 (lower is better)
Translates to: PSPRPRLISPRS*PGPSAGAPHAP
Trigger: TGGCGCATGTGGAGCACCTGCTGAGGGACCTGGCCAGCTTCGAGGAGAAATCAGGCGTGGCCGTGGAGAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 72 bp GGGGCCAAGCCTTCTGCCCCTGGCAACACACGCCTGTaGGGAGTTGAGCCTTTGAGTGCCTGGGAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: GAKPSAPGNTRL*GVEPLSAWEAA
Trigger: AGCTGCCTCCCAGGCACTCAAAGGCTCAACTCCCCACAGGCGTGTGTTGCCAGGGGCAGAAGGCTTGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS CCA 72 bp CCCAGTGCCTGGACATCTGCCTCTGCTGCGTGGACATaGTGGGGGCGAGGAGGATGCTTTGTCCCAGGGCAG +
Preference number: 6 (lower is better)
Translates to: PSAWTSASAAWT*WGRGGCFVPGQ
Trigger: CTGCCCTGGGACAAAGCATCCTCCTCGCCCCCACCATGTCCACGCAGCAGAGGCAGATGTCCAGGCACTGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp CTCCTCACGCGCAGCGCATCGGGGCCTCCCTTCTCGTaGTCCGCCACGACCGTGTATTTACCTGGAACCTGG +
Preference number: 6 (lower is better)
Translates to: LLTRSASGPPFS*SATTVYLPGTW
Trigger: CCAGGTTCCAGGTAAATACACGGTCGTGGCGGACCACGAGAAGGGAGGCCCCGATGCGCTGCGCGTGAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 72 bp AACCCGTCGGGCGAAGCACGAGGACGAGCTGCAGGTTaGCCGGGAAAGATGCTGCGATGCGCAGGACGGACG +
Preference number: 6 (lower is better)
Translates to: NPSGEARGRAAG*PGKMLRCAGRT
Trigger: CGTCCGTCCTGCGCATCGCAGCATCTTTCCCGGCAAACCTGCAGCTCGTCCTCGTGCTTCGCCCGACGGGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000409954.6
ENST00000421756.5
ENST00000423251.1
ENST00000535094.7
CDS CAA 72 bp TCTCTGCCCTTCCAGAGCCTCCGGGACCTGTCCCCTTaGCACCTCCAGCCTTGGGGCATGGACCACGCACAG +
Preference number: 6 (lower is better)
Translates to: SLPFQSLRDLSP*HLQPWGMDHAQ
Trigger: CTGTGCGTGGTCCATGCCCCAAGGCTGGAGGTGCAAAGGGGACAGGTCCCGGAGGCTCTGGAAGGGCAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 90 bp TTGGATGTGCCAGGCCACGGAGATGGAACCCAGCTGCCCTCCCTCTaGCCCCAGGCGGCGTGGTCAGAGCTGCCTTTGGACTCCAAGCCA +
Preference number: 6 (lower is better)
Translates to: LDVPGHGDGTQLPSL*PQAAWSELPLDSKP
Trigger: TGGCTTGGAGTCCAAAGGCAGCTCTGACCACGCCGCCTGGGGCAAGAGGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 72 bp CAGCATCTTCCTGGAGGCTGGGACGAGCACATCAGATaGGAGACCCCCGCGGCACCCCTCCCAAGTCAGCCT +
Preference number: 6 (lower is better)
Translates to: QHLPGGWDEHIR*ETPAAPLPSQP
Trigger: AGGCTGACTTGGGAGGGGTGCCGCGGGGGTCTCTCATCTGATGTGCTCGTCCCAGCCTCCAGGAAGATGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397024.1
CDS TCA 72 bp AATCATCACACTCAGGTGGGTCACAAGCCAGGGGACTaGGATCGCCGAGGGGCTGTGGCCATGGCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: NHHTQVGHKPGD*DRRGAVAMAVA
Trigger: GGCGACGGCCATGGCCACAGCCCCTCGGCGATCTCAGTCCCCTGGCTTGTGACCCACCTGAGTGTGATGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS GCA 72 bp CAGCTCCAGGGACTTGCTGAGCAGCCCCCTCCTCCTTaGGATCTCCGCAGAGAACTGGTCACAGAGGTGCCG +
Preference number: 6 (lower is better)
Translates to: QLQGLAEQPPPP*DLRRELVTEVP
Trigger: CGGCACCTCTGTGACCAGTTCTCTGCGGAGATCGCAAGGAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 72 bp TCATCACACCACTTCATGGACGTCTCCAGGCGGCGGTaGAGCTCCAGGGACTTGCTGAGCAGCCCCCTCCTC +
Preference number: 6 (lower is better)
Translates to: SSHHFMDVSRRR*SSRDLLSSPLL
Trigger: GAGGAGGGGGCTGCTCAGCAAGTCCCTGGAGCTGCACCGCCGCCTGGAGACGTCCATGAAGTGGTGTGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 72 bp GCCTTCAGGATGCCCAGGATGGAGCTCAGCGCCTCCTaGAGGTCCTCAGCCCCCTCGCAGTTCCTGCTGTAT +
Preference number: 6 (lower is better)
Translates to: AFRMPRMELSAS*RSSAPSQFLLY
Trigger: ATACAGCAGGAACTGCGAGGGGGCTGAGGACCTGCAGGAGGCGCTGAGCTCCATCCTGGGCATCCTGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 72 bp TGGATGTCGGCAGCACAGAGCGGGACGATGTCCTGGTaGATGATTTCATCTCCGGCCGCCCCGTGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: WMSAAQSGTMSW*MISSPAAPWQV
Trigger: CACCTGCCACGGGGCGGCCGGAGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS GCA 72 bp AGCACCACGTTCCCCCAGTGCCTGGACATCTGCCTCTaGTGCGTGGACATGGTGGGGGCGAGGAGGATGCTT +
Preference number: 6 (lower is better)
Translates to: STTFPQCLDICL*CVDMVGARRML
Trigger: AAGCATCCTCCTCGCCCCCACCATGTCCACGCAGCAGAGGCAGATGTCCAGGCACTGGGGGAACGTGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp CGAGGCAGTGACCCCCGAACGTTCATGTGTGGTGGGTaGTGCTGCGTCTGTGTCCCTGTCTGCATCTGGCCG +
Preference number: 6 (lower is better)
Translates to: RGSDPRTFMCGG*CCVCVPVCIWP
Trigger: CGGCCAGATGCAGACAGGGACACAGACGCAGCAGCACCCACCACACATGAACGTTCGGGGGTCACTGCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp AGCCTCTGCACGGTGGCCTGGTTGTCAAGCTGGTCCTaGTTCACACTGGGCTCTGAGCCCTCAGCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: SLCTVAWLSSWS*FTLGSEPSACS
Trigger: GCTGCAGGCTGAGGGCTCAGAGCCCAGTGTGAACCAGGACCAGCTTGACAACCAGGCCACCGTGCAGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 72 bp CTGGCCAGCTCCTTCACCTTGGTGTGGCCCCTCTTGTaGTCGGTCCAGACGCTGAACGAGCCCTGCATCAGC +
Preference number: 6 (lower is better)
Translates to: LASSFTLVWPLL*SVQTLNEPCIS
Trigger: GCTGATGCAGGGCTCGTTCAGCGTCTGGACCGACCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp AGTGCCTCCCGAGACTGGCAGGACACCAGCTCACTGTaGACGAGATGCCGAGACCTCTGTGGCCATGGCCGT +
Preference number: 6 (lower is better)
Translates to: SASRDWQDTSSL*TRCRDLCGHGR
Trigger: ACGGCCATGGCCACAGAGGTCTCGGCATCTCGTCCACAGTGAGCTGGTGTCCTGCCAGTCTCGGGAGGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS CCA 72 bp ATCCGATGCCAGCGTCCTGCAGGATCACGCCGGTCCTaGCATCTGAGGTGCCCGTGCTGGTCCACGTTAAGG +
Preference number: 6 (lower is better)
Translates to: IRCQRPAGSRRS*HLRCPCWSTLR
Trigger: CCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATCCTGCAGGACGCTGGCATCGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397021.5
ENST00000494043.1
CDS CCA 72 bp TCCTGGATGTCGGCAGCACAGAGCGGGACGATGTCCTaGTGCATGATTTCATCTCCGGCCGCCCCGTGGCAG +
Preference number: 6 (lower is better)
Translates to: SWMSAAQSGTMS*CMISSPAAPWQ
Trigger: CTGCCACGGGGCGGCCGGAGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397030.5
CDS CCA 72 bp GTCACAAGCCAGGGGACTGAGATCGCCGAGGGGCTGTaGCCATGGCCGTCGCCTCCGGTGTGTCTTGAACAA +
Preference number: 6 (lower is better)
Translates to: VTSQGTEIAEGL*PWPSPPVCLEQ
Trigger: TTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGCCCCTCGGCGATCTCAGTCCCCTGGCTTGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS CCA 72 bp CTTGACCTATGGGATACCGAGGGCTGTGGTCCCCACTaGCAAGAGAGTAGCCCCCGGCACAGCGGCACCGAA +
Preference number: 6 (lower is better)
Translates to: LDLWDTEGCGPH*QESSPRHSGTE
Trigger: TTCGGTGCCGCTGTGCCGGGGGCTACTCTCTTGCCAGTGGGGACCACAGCCCTCGGTATCCCATAGGTCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 72 bp TCGTGGTCCGCCACGACCGTGTATTTACCTGGAACCTaGTGGGAGACGGGCAGGGGCACAGACAGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: SWSATTVYLPGT*WETGRGTDSVS
Trigger: GCTGACGCTGTCTGTGCCCCTGCCCGTCTCCCACCAGGTTCCAGGTAAATACACGGTCGTGGCGGACCACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 90 bp AAGCCTTCTGCCCCTGGCAACACACGCCTGTGGGGAGTTGAGCCTTaGAGTGCCTGGGAGGCAGCTGCGTCCGCTGTTCTCATCCGTCTG +
Preference number: 6 (lower is better)
Translates to: KPSAPGNTRLWGVEP*SAWEAAASAVLIRL
Trigger: CAGACGGATGAGAACAGCGGACGCAGCTGCCTCCCAGGCACTCAAAGGCTCAACTCCCCACAGGCGTGTGTTGCCAGGGGCAGAAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS CAA 90 bp AGGGCAGCACCGGCCTTTCCCATGCGGGGGAGATGGGAGACGCCATaGGGGCTAAATAAACACGCAAAGCCAGCAACCAGGCAGCAGGCC +
Preference number: 6 (lower is better)
Translates to: RAAPAFPMRGRWETP*GLNKHAKPATRQQA
Trigger: GGCCTGCTGCCTGGTTGCTGGCTTTGCGTGTTTATTTAGCCCCAATGGCGTCTCCCATCTCCCCCGCATGGGAAAGGCCGGTGCTGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CAA 90 bp TGCGTCTTCTGTGACAGAGACCCAAACCACTCAGGGCTCGTGACCTaGGGAGCCCCATGGTCCCCCACCCATGTGGGCAGACAGCCCACT +
Preference number: 6 (lower is better)
Translates to: CVFCDRDPNHSGLVT*GAPWSPTHVGRQPT
Trigger: AGTGGGCTGTCTGCCCACATGGGTGGGGGACCATGGGGCTCCCAAGGTCACGAGCCCTGAGTGGTTTGGGTCTCTGTCACAGAAGACGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp AACCCGCCGTCCTCCTCTGCGTCGGACGAGTTAATCTaGTCCTCTGCACTTGACCAGCCCCCGTCGTCCTCA +
Preference number: 6 (lower is better)
Translates to: NPPSSSASDELI*SSALDQPPSSS
Trigger: TGAGGACGACGGGGGCTGGTCAAGTGCAGAGGAGCAGATTAACTCGTCCGACGCAGAGGAGGACGGCGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000261963.11
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000420013.5
ENST00000421756.5
ENST00000441756.1
ENST00000453297.5
ENST00000469415.1
ENST00000491028.1
ENST00000535094.7
CDS GCA 72 bp CGTCCTGCAGGATCACGCCGGTCCTGGCATCTGAGGTaGCCGTGCTGGTCCACGTTAAGGATTCACTCGTGG +
Preference number: 6 (lower is better)
Translates to: RPAGSRRSWHLR*PCWSTLRIHSW
Trigger: CCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATCCTGCAGGACG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397021.5
ENST00000494043.1
CDS GCA 72 bp GCGAAACTTTCGATGGCCAGGCACACTCTACACGTGTaGCCGTCACCTAGAGTCGCCTGTGCCTGCGCTGCC +
Preference number: 6 (lower is better)
Translates to: AKLSMARHTLHV*PSPRVACACAA
Trigger: GGCAGCGCAGGCACAGGCGACTCTAGGTGACGGGCACACGTGTAGAGTGTGCCTGGCCATCGAAAGTTTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475524.1
CDS CCA 72 bp GACCAGCCCCCGTCGTCCTCAGGTGCCTCCAGTGAGTaGGACGTTTTGCTCCAACCTCGCACACCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: DQPPSSSGASSE*DVLLQPRTPKG
Trigger: TCCCTTTGGTGTGCGAGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAGGACGACGGGGGCTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397017.6
ENST00000413354.5
ENST00000420013.5
ENST00000453297.5
ENST00000491028.1
CDS CCA 72 bp GGATCACGCCGGTCCTGGCATCTGAGGTGCCCGTGCTaGTCCACGTTAAGGATTCACTCGTGGTGGCATGGC +
Preference number: 6 (lower is better)
Translates to: GSRRSWHLRCPC*STLRIHSWWHG
Trigger: GCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397021.5
ENST00000494043.1
CDS CCA 72 bp TCTGCTGCGACAGCTAAAAGCCGGGCGGGTGCCGCATaGTCACAAGAGACAGGTGCTCAGGACCCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: SAATAKSRAGAA*SQETGAQDPGD
Trigger: GTCACCAGGGTCCTGAGCACCTGTCTCTTGTGACCATGCGGCACCCGCCCGGCTTTTAGCTGTCGCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS CCA 72 bp GTGCAGTGCCCGGGGGAGGGGTCCGGACTGGAGCTGTaGACTAGGAATCATCACACTCAGGTGGGTCACAAG +
Preference number: 6 (lower is better)
Translates to: VQCPGEGSGLEL*TRNHHTQVGHK
Trigger: CTTGTGACCCACCTGAGTGTGATGATTCCTAGTCCACAGCTCCAGTCCGGACCCCTCCCCCGGGCACTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS CCA 72 bp TTGAGACCATCTGCTTCCAATTGCTGGGCCACCCTGTaGGAGACCTCGATCCCCAGGCCCTGGGAAGCCACG +
Preference number: 6 (lower is better)
Translates to: LRPSASNCWATL*ETSIPRPWEAT
Trigger: CGTGGCTTCCCAGGGCCTGGGGATCGAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 72 bp GGGACTCTGCCCCAAACCACAATGTCTGCCGGGCTCTaGGTGCACGTACCTGGGGATGCTGGTGAGGTAGGT +
Preference number: 6 (lower is better)
Translates to: GTLPQTTMSAGL*VHVPGDAGEVG
Trigger: ACCTACCTCACCAGCATCCCCAGGTACGTGCACCCAGAGCCCGGCAGACATTGTGGTTTGGGGCAGAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486210.1
CDS CAA 72 bp GCGATGCGCAGGACGGACGCCTTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATCACCAGGATGAATCCG +
Preference number: 6 (lower is better)
Translates to: AMRRTDAFTEVH*SRRRSITRMNP
Trigger: CGGATTCATCCTGGTGATAGACCGGCGACGGGACAAATGGACCTCCGTGAAGGCGTCCGTCCTGCGCATCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397021.5
ENST00000397030.5
ENST00000409954.6
ENST00000421756.5
ENST00000423251.1
ENST00000473345.5
ENST00000480321.1
ENST00000494043.1
ENST00000535094.7
CDS CAA 72 bp GGCTGGCCTGCCTGCGGTGGAACACCTCCTCCATGCTaGCCTGCTTCTGGAAGACCTTTCGCACGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: GWPACGGTPPPC*PASGRPFARAP
Trigger: TGGAGCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCCACCGCAGGCAGGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CAA 72 bp TGTGACAGAGACCCAAACCACTCAGGGCTCGTGACCTaGGGAGCCCCATGGTCCCCCACCCATGTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: CDRDPNHSGLVT*GAPWSPTHVGR
Trigger: TCTGCCCACATGGGTGGGGGACCATGGGGCTCCCAAGGTCACGAGCCCTGAGTGGTTTGGGTCTCTGTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp AAGAGCACTGCCTTCTCGTGCAGGAACAGGTGCCGCTGCATGGGCTaGAACCTGGCCAGCTCCTTCACCTTGGTGTGGCCCCTCTTGTGG +
Preference number: 6 (lower is better)
Translates to: KSTAFSCRNRCRCMG*NLASSFTLVWPLLW
Trigger: CCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000535094.7
CDS CAA 90 bp GCACTTACTGCGATGCGCAGGACGGACGCCTTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATCACCAGGATGAATCCGATGCCAGCG +
Preference number: 6 (lower is better)
Translates to: ALTAMRRTDAFTEVH*SRRRSITRMNPMPA
Trigger: CGCTGGCATCGGATTCATCCTGGTGATAGACCGGCGACGGGACAAATGGACCTCCGTGAAGGCGTCCGTCCTGCGCATCGCAGTAAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp GCTCTAAGTGCGATGCGCAGGACGGACGCCTTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATCACCAGGATGAATCCGATGCCAGCG +
Preference number: 6 (lower is better)
Translates to: ALSAMRRTDAFTEVH*SRRRSITRMNPMPA
Trigger: CGCTGGCATCGGATTCATCCTGGTGATAGACCGGCGACGGGACAAATGGACCTCCGTGAAGGCGTCCGTCCTGCGCATCGCACTTAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473345.5
CDS CAA 90 bp CCCGGAGGGCCCTTCCGTGCTTTCAGGTCTTATTTCCATGCTGCTTaGCTGAGGCCTTCCTTGGTACTCCCCGACTCGCCCGTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: PGGPFRAFRSYFHAA*LRPSLVLPDSPVLC
Trigger: GCAGAGGACGGGCGAGTCGGGGAGTACCAAGGAAGGCCTCAGCAAAGCAGCATGGAAATAAGACCTGAAAGCACGGAAGGGCCCTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS TCA 72 bp AGGTCCATTTGTCCCGTCGCCGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCTGCAGGCTGGGGATGC +
Preference number: 6 (lower is better)
Translates to: RSICPVAGLSPG*IRCQRPAGWGC
Trigger: GCATCCCCAGCCTGCAGGACGCTGGCATCGGATTCATCCTGGTGATAGACCGGCGACGGGACAAATGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000409954.6
ENST00000421756.5
ENST00000473345.5
ENST00000535094.7
CDS TCA 72 bp AGGTCCATTTGTCCCGTCGCCGGTCTATCACCAGGATaGATCCGATGCCAGCGTCCTGCAGGATCACGCCGG +
Preference number: 6 (lower is better)
Translates to: RSICPVAGLSPG*IRCQRPAGSRR
Trigger: CCGGCGTGATCCTGCAGGACGCTGGCATCGGATTCATCCTGGTGATAGACCGGCGACGGGACAAATGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397021.5
ENST00000423251.1
ENST00000494043.1
CDS TCA 72 bp TGGTCAGAGCTGCCTTTGGACTCCAAGCCAGGGAGCTaGTCCCGGAGCTCTCTGGGTCCCAGTCCTCCTAGA +
Preference number: 6 (lower is better)
Translates to: WSELPLDSKPGS*SRSSLGPSPPR
Trigger: TCTAGGAGGACTGGGACCCAGAGAGCTCCGGGATCAGCTCCCTGGCTTGGAGTCCAAAGGCAGCTCTGACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GCAGGATCACGCCGGTCCTGGCATCTGAGGTGCCCGTaGTGGTCCACGTTAAGGATTCACTCGTGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: AGSRRSWHLRCP*WSTLRIHSWWH
Trigger: ATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397021.5
ENST00000494043.1
CDS GCA 72 bp TCCACAACAGCCCAGACCAGCAACGGGGACCACGACTaGCATGTGAGAGCTGCTGGATGCAGAATGCACCCC +
Preference number: 6 (lower is better)
Translates to: STTAQTSNGDHD*HVRAAGCRMHP
Trigger: GGGGTGCATTCTGCATCCAGCAGCTCTCACATGGCAGTCGTGGTCCCCGTTGCTGGTCTGGGCTGTTGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GCTACACGTGCCTTTTCCACAAAGGGACCTTGGATGTaGCAGGCCACGGAGATGGAACCCAGCTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: ATRAFSTKGPWM*QATEMEPSCPP
Trigger: GGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp TCCTGGATGTCGGCAGCACAGAGCGGGACGATGTCCTaGTGCATGATTTCATCTGCGCCGGCCTTCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SWMSAAQSGTMS*CMISSAPAFSS
Trigger: GCTGCTGAAGGCCGGCGCAGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000397024.1
ENST00000486210.1
CDS CCA 72 bp GCGCACACAGCACTGAGCTTGTCGACTGGACGTCATTaGGCAGCTCTGTTTCAGCCAGCTCGGTCCCGAAGG +
Preference number: 6 (lower is better)
Translates to: AHTALSLSTGRH*AALFQPARSRR
Trigger: CCTTCGGGACCGAGCTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 72 bp TTTTCCGCACCGGTCTCCAAAAACTTCTCGATTTCCTaGAGGGCAGCCTCCGCGCCGTCCTGGGACTGGCAC +
Preference number: 6 (lower is better)
Translates to: FSAPVSKNFSIS*RAASAPSWDWH
Trigger: GTGCCAGTCCCAGGACGGCGCGGAGGCTGCCCTCCAGGAAATCGAGAAGTTTTTGGAGACCGGTGCGGAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp ATGGGCTTGAACCTGGCCAGCTCCTTCACCTTGGTGTaGCCCCTCTTGTGGTCGGTCCAGACGCTGAACGAG +
Preference number: 6 (lower is better)
Translates to: MGLNLASSFTLV*PLLWSVQTLNE
Trigger: CTCGTTCAGCGTCTGGACCGACCACAAGAGGGGCCACACCAAGGTGAAGGAGCTGGCCAGGTTCAAGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp TCCTGGATGTCGGCAGCACAGAGCGGGACGATGTCCTaGTGCATGATTTCATCTGTGGCCATGGCCGTCGCC +
Preference number: 6 (lower is better)
Translates to: SWMSAAQSGTMS*CMISSVAMAVA
Trigger: GGCGACGGCCATGGCCACAGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS CCA 72 bp AACACACGCCTGTGGGGAGTTGAGCCTTTGAGTGCCTaGGAGGCAGCTGCGTCCGCTGTTCTCATCCGTCTG +
Preference number: 6 (lower is better)
Translates to: NTRLWGVEPLSA*EAAASAVLIRL
Trigger: CAGACGGATGAGAACAGCGGACGCAGCTGCCTCCCAGGCACTCAAAGGCTCAACTCCCCACAGGCGTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS CCA 72 bp CGGAGACTTTTCTGCATTAAGCCAAAGTCAACTGGGTaGCACGGCTCAGCTCCCGGCACTGGGACCAGGGCG +
Preference number: 6 (lower is better)
Translates to: RRLFCIKPKSTG*HGSAPGTGTRA
Trigger: CGCCCTGGTCCCAGTGCCGGGAGCTGAGCCGTGCCACCCAGTTGACTTTGGCTTAATGCAGAAAAGTCTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464800.5
CDS CCA 72 bp ACATCACGCCGGTCCTGGCATCTGAGGTGCCCGTGCTaGTCCACGTTAAGGATTCACTCGTGGTGGCATGGC +
Preference number: 6 (lower is better)
Translates to: TSRRSWHLRCPC*STLRIHSWWHG
Trigger: GCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS CCA 72 bp AGGAAAGCTGTGCAGTACCACTTCCAACTTCCAGCCTaGAGCGTCTCTGCACACAGCCCCCGTCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: RKAVQYHFQLPA*SVSAHSPRPAW
Trigger: CCAGGCAGGACGGGGGCTGTGTGCAGAGACGCTCCAGGCTGGAAGTTGGAAGTGGTACTGCACAGCTTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp AAAGATGCTGCGATGCGCAGGACGGACGCCTTCACGGAGGTCCATTaGTCCCGTCGCCGGTCTATCACCAGGATGAATCCGATGCCAGCG +
Preference number: 6 (lower is better)
Translates to: KDAAMRRTDAFTEVH*SRRRSITRMNPMPA
Trigger: CGCTGGCATCGGATTCATCCTGGTGATAGACCGGCGACGGGACAAATGGACCTCCGTGAAGGCGTCCGTCCTGCGCATCGCAGCATCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000409954.6
ENST00000421756.5
ENST00000423251.1
ENST00000535094.7
CDS CAA 90 bp CAGAATGCCTGGCACGTTTCAGGGTTTGAGACCATCTGCTTCCAATaGCTGGGCCACCCTGTGGGAGACCTCGATCCCCAGGCCCTGGGA +
Preference number: 6 (lower is better)
Translates to: QNAWHVSGFETICFQ*LGHPVGDLDPQALG
Trigger: TCCCAGGGCCTGGGGATCGAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCAGGCATTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CAA 90 bp CGTGCTTTCAGGTCTTATTTCCATGCTGCTTTGCTGAGGCCTTCCTaGGTACTCCCCGACTCGCCCGTCCTCTGCCCTCCCTCTCCCTGC +
Preference number: 6 (lower is better)
Translates to: RAFRSYFHAALLRPS*VLPDSPVLCPPSPC
Trigger: GCAGGGAGAGGGAGGGCAGAGGACGGGCGAGTCGGGGAGTACCAAGGAAGGCCTCAGCAAAGCAGCATGGAAATAAGACCTGAAAGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS TCA 72 bp CGAAGGACTGCAGCATCTGAGCCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGGCCGTGCGCTGGCACA +
Preference number: 6 (lower is better)
Translates to: RRTAASEPSASP*GRNFRWPCAGT
Trigger: TGTGCCAGCGCACGGCCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000535094.7
CDS TCA 72 bp CAATTACCCTCCTGGAGGCCGATTCCTGCTCCGCCCTaGTGTTTACATGCAGGTCCAGGCGACACACCGTGC +
Preference number: 6 (lower is better)
Translates to: QLPSWRPIPAPP*CLHAGPGDTPC
Trigger: GCACGGTGTGTCGCCTGGACCTGCATGTAAACATCAGGGCGGAGCAGGAATCGGCCTCCAGGAGGGTAATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS GCA 72 bp AAGAGCACTGCCTTCTCGTGCAGGAACAGGTGCCGCTaGATGGGCTTGAACCTGGCCAGCTCCTTCACCTTG +
Preference number: 6 (lower is better)
Translates to: KSTAFSCRNRCR*MGLNLASSFTL
Trigger: CAAGGTGAAGGAGCTGGCCAGGTTCAAGCCCATGCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 72 bp CCCTTCTCGGCCATCGAACCGCCCTGTCACAAAGGCTaGTACAAAGCGGAGGCAGCTCTGGTTCTTCACGCA +
Preference number: 6 (lower is better)
Translates to: PFSAIEPPCHKG*YKAEAALVLHA
Trigger: TGCGTGAAGAACCAGAGCTGCCTCCGCTTTGTAGCAGCCTTTGTGACAGGGCGGTTCGATGGCCGAGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS GCA 72 bp GTACGCCAGGCAATTACCCTCCTGGAGGCCGATTCCTaGTCCGCCCTGATGTTTACATGCAGGTCCAGGCGA +
Preference number: 6 (lower is better)
Translates to: VRQAITLLEADS*SALMFTCRSRR
Trigger: TCGCCTGGACCTGCATGTAAACATCAGGGCGGAGCAGGAATCGGCCTCCAGGAGGGTAATTGCCTGGCGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS GCA 72 bp CCGCAGATGCCCTCCCAGGCAGGTGTTTTCAGTGAGTaGCACGGTCATGTTCAACACCTAGCAGACCGAGCC +
Preference number: 6 (lower is better)
Translates to: PQMPSQAGVFSE*HGHVQHLADRA
Trigger: GGCTCGGTCTGCTAGGTGTTGAACATGACCGTGGCACTCACTGAAAACACCTGCCTGGGAGGGCATCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 72 bp GGCACGTTTCAGGGTTTGAGACCATCTGCTTCCAATTaGTGGGCCACCCTGTGGGAGACCTCGATCCCCAGG +
Preference number: 6 (lower is better)
Translates to: GTFQGLRPSASN*WATLWETSIPR
Trigger: CCTGGGGATCGAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 72 bp ATGGCGCATACATCACGCCGGTCCTGGCATCTGAGGTaGCCGTGCTGGTCCACGTTAAGGATTCACTCGTGG +
Preference number: 6 (lower is better)
Translates to: MAHTSRRSWHLR*PCWSTLRIHSW
Trigger: CCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATGTATGCGCCAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 72 bp ACACACACACACACACACACACAGGAAGGCCCTCCCTaGACAGTGCGACTCGGTTACCTTGGCCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: THTHTHTQEGPP*TVRLGYLGPSG
Trigger: CCCAGATGGGCCAAGGTAACCGAGTCGCACTGTGCAGGGAGGGCCTTCCTGTGTGTGTGTGTGTGTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp AAAAAGGCGCCCGATGCCACTGGATGCCGCCCGGCCTaGCTGTGTGGGGCTTCCACTCACTCTACGTTTAAA +
Preference number: 6 (lower is better)
Translates to: KKAPDATGCRPA*LCGASTHSTFK
Trigger: TTTAAACGTAGAGTGAGTGGAAGCCCCACACAGGCAGGCCGGGCGGCATCCAGTGGCATCGGGCGCCTTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp TGGGGTGGAATTTCAGCCTCTGGGTTCGCCCACAAATaGCCCCGCTACTCCACAACAGCCCAGACCAGCAAC +
Preference number: 6 (lower is better)
Translates to: WGGISASGFAHK*PRYSTTAQTSN
Trigger: GTTGCTGGTCTGGGCTGTTGTGGAGTAGCGGGGGCATTTGTGGGCGAACCCAGAGGCTGAAATTCCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GACGCCGCCGTTAATGTGTGCAGGTGGGAAGCCGGCTaGCCACGAAATCCCTCAGAAAACCTCTTGGGAGAG +
Preference number: 6 (lower is better)
Translates to: DAAVNVCRWEAG*PRNPSENLLGE
Trigger: CTCTCCCAAGAGGTTTTCTGAGGGATTTCGTGGGCAGCCGGCTTCCCACCTGCACACATTAACGGCGGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp TCCAGCCTGGAGCGTCTCTGCACACAGCCCCCGTCCTaGCTGGTCAGGACTGTTGTGCTTTGTGTAAGAGGA +
Preference number: 6 (lower is better)
Translates to: SSLERLCTQPPS*LVRTVVLCVRG
Trigger: TCCTCTTACACAAAGCACAACAGTCCTGACCAGGCAGGACGGGGGCTGTGTGCAGAGACGCTCCAGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GTGCTGTTCCCGCTTTGTCTCCGGGGCCTAGAACTGTaGCTGGCACACAGCGGATGCTGCACAGATGTCATG +
Preference number: 6 (lower is better)
Translates to: VLFPLCLRGLEL*LAHSGCCTDVM
Trigger: CATGACATCTGTGCAGCATCCGCTGTGTGCCAGGCACAGTTCTAGGCCCCGGAGACAAAGCGGGAACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS GCA 72 bp TGCGCCTGCATACCCGCCTCCCGGAGGGCCCTTCCGTaGTTTCAGGTCTTATTTCCATGCTGCTTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: CACIPASRRALP*FQVLFPCCFAE
Trigger: CTCAGCAAAGCAGCATGGAAATAAGACCTGAAAGCACGGAAGGGCCCTCCGGGAGGCGGGTATGCAGGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CCA 72 bp AAGGATGTACTCACACTGCCGAGTGCCTCCCGAGACTaGCAGGACACCAGCTCACTGTGGACGAGATGCCGA +
Preference number: 6 (lower is better)
Translates to: KDVLTLPSASRD*QDTSSLWTRCR
Trigger: TCGGCATCTCGTCCACAGTGAGCTGGTGTCCTGCCAGTCTCGGGAGGCACTCGGCAGTGTGAGTACATCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS CCA 72 bp TCCTGGATGTCGGCAGCACAGAGCGGGACGATGTCCTaGTGCATGATTTCATCTGGGCTGGCAGGGATGAGC +
Preference number: 6 (lower is better)
Translates to: SWMSAAQSGTMS*CMISSGLAGMS
Trigger: GCTCATCCCTGCCAGCCCAGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS CCA 72 bp TCCTGGATGTCGGCAGCACAGAGCGGGACGATGTCCTaGTGCATGATTTCATCCTCAGCCACGGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: SWMSAAQSGTMS*CMISSSATDSS
Trigger: GCTGCTGTCCGTGGCTGAGGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS CCA 72 bp CAGAGGGCAGCACCGGCCTTTCCCATGCGGGGGAGATaGGAGACGCCATTGGGGCTAAATAAACACGCAAAG +
Preference number: 6 (lower is better)
Translates to: QRAAPAFPMRGR*ETPLGLNKHAK
Trigger: CTTTGCGTGTTTATTTAGCCCCAATGGCGTCTCCCATCTCCCCCGCATGGGAAAGGCCGGTGCTGCCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 72 bp ACGTTTCAGGGTTTGAGACCATCTGCTTCCAATTGCTaGGCCACCCTGTGGGAGACCTCGATCCCCAGGCCC +
Preference number: 6 (lower is better)
Translates to: TFQGLRPSASNC*ATLWETSIPRP
Trigger: GGGCCTGGGGATCGAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 72 bp GACCAGCCCCCGTCGTCCTCAGGTGCCTCCAGTGAGTaGGACGTTTTGCTCCAACCTAAGAGAGACAGACAC +
Preference number: 6 (lower is better)
Translates to: DQPPSSSGASSE*DVLLQPKRDRH
Trigger: GTGTCTGTCTCTCTTAGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAGGACGACGGGGGCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CCA 72 bp AAAGCGCGGCCGTTTGGGGACTGGTCCTCTAGCAAATaGTCCTCTAGAAAGCTGCGATGCGCAGGACGGACG +
Preference number: 6 (lower is better)
Translates to: KARPFGDWSSSK*SSRKLRCAGRT
Trigger: CGTCCGTCCTGCGCATCGCAGCTTTCTAGAGGACCATTTGCTAGAGGACCAGTCCCCAAACGGCCGCGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494043.1
CDS CCA 72 bp GCGGATGCTGCACAGATGTCATGGAACACGTTCCGTTaGGGAATGGGGACCCAGGAAGCGGCAGCTGTTCCT +
Preference number: 6 (lower is better)
Translates to: ADAAQMSWNTFR*GMGTQEAAAVP
Trigger: AGGAACAGCTGCCGCTTCCTGGGTCCCCATTCCCCAACGGAACGTGTTCCATGACATCTGTGCAGCATCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 72 bp TGCGCACACAGCACTGAGCTTGTCGACTGGACGTCATaGGGCAGCTCTGTTTCAGCCAGCTCGGTCCCGAAG +
Preference number: 6 (lower is better)
Translates to: CAHSTELVDWTS*GSSVSASSVPK
Trigger: CTTCGGGACCGAGCTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CAA 72 bp CCGGCCTTTCCCATGCGGGGGAGATGGGAGACGCCATaGGGGCTAAATAAACACGCAAAGCCAGCAACCAGG +
Preference number: 6 (lower is better)
Translates to: PAFPMRGRWETP*GLNKHAKPATR
Trigger: CCTGGTTGCTGGCTTTGCGTGTTTATTTAGCCCCAATGGCGTCTCCCATCTCCCCCGCATGGGAAAGGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CAA 72 bp AGCGGATGCTGCACAGATGTCATGGAACACGTTCCGTaGGGGAATGGGGACCCAGGAAGCGGCAGCTGTTCC +
Preference number: 6 (lower is better)
Translates to: SGCCTDVMEHVP*GNGDPGSGSCS
Trigger: GGAACAGCTGCCGCTTCCTGGGTCCCCATTCCCCAACGGAACGTGTTCCATGACATCTGTGCAGCATCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 72 bp AGGTCTTATTTCCATGCTGCTTTGCTGAGGCCTTCCTaGGTACTCCCCGACTCGCCCGTCCTCTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: RSYFHAALLRPS*VLPDSPVLCPP
Trigger: GGGAGGGCAGAGGACGGGCGAGTCGGGGAGTACCAAGGAAGGCCTCAGCAAAGCAGCATGGAAATAAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 90 bp TTCTCTGTGTGCGCACACAGCACTGAGCTTGTCGACTGGACGTCATaGGGCAGCTCTGTTTCAGCCAGCTCGGTCCCGAAGGACTGCAGC +
Preference number: 6 (lower is better)
Translates to: FSVCAHSTELVDWTS*GSSVSASSVPKDCS
Trigger: GCTGCAGTCCTTCGGGACCGAGCTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CAA 90 bp TCCTCCAGTAACAGGTGCTACACGTGCCTTTTCCACAAAGGGACCTaGGATGTGCCAGGCCACGGAGATGGAACCCAGCTGCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: SSSNRCYTCLFHKGT*DVPGHGDGTQLPSL
Trigger: GAGGGAGGGCAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGCACCTGTTACTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp CTCCTCACTGTAAGAGTGGAGGTTCCTGTCTGTGCTGTTCCCGCTTaGTCTCCGGGGCCTAGAACTGTGCCTGGCACACAGCGGATGCTG +
Preference number: 6 (lower is better)
Translates to: LLTVRVEVPVCAVPA*SPGPRTVPGTQRML
Trigger: CAGCATCCGCTGTGTGCCAGGCACAGTTCTAGGCCCCGGAGACAAAGCGGGAACAGCACAGACAGGAACCTCCACTCTTACAGTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 90 bp GGTGCGTGCAGAACCCGGAGGAAGGAATGGCAGGGCCTCCGCGACTaGTCCCCAGTGCTCAGAAGCAGCAGACTCCATGAACAAAATGCT +
Preference number: 6 (lower is better)
Translates to: GACRTRRKEWQGLRD*SPVLRSSRLHEQNA
Trigger: AGCATTTTGTTCATGGAGTCTGCTGCTTCTGAGCACTGGGGACAAGTCGCGGAGGCCCTGCCATTCCTTCCTCCGGGTTCTGCACGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486806.1
CDS CAA 90 bp CCTTCGCCTTGTCCTTCTTCTCTGTGTGCGCACACAGCACTGAGCTaGTCGACTGGACGTCATTGGGCAGCTCTGTTTCAGCCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: PSPCPSSLCAHTALS*STGRHWAALFQPAR
Trigger: CCGAGCTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGAAGAAGGACAAGGCGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CAA 90 bp AGATCGCCGAGGGGCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTCAGACACATCAATTTGGTGATCCGT +
Preference number: 6 (lower is better)
Translates to: RSPRGCGHGRRLRCV*NKPDDVRHINLVIR
Trigger: ACGGATCACCAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGCCCCTCGGCGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS TCA 72 bp GTTTCAGCCAGCTCGGTCCCGAAGGACTGCAGCATCTaGGCCGTCTGCTTCACCATGAGGGCGAAACTTTCG +
Preference number: 6 (lower is better)
Translates to: VSASSVPKDCSI*AVCFTMRAKLS
Trigger: CGAAAGTTTCGCCCTCATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTTCGGGACCGAGCTGGCTGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS TCA 72 bp GGTGCTCCACATGCGCCAGGCTGTTGCCGATGTCTGTaGAGGTTGCTATCTTCTGGGACGCTGCGTCCAAGA +
Preference number: 6 (lower is better)
Translates to: GAPHAPGCCRCL*RLLSSGTLRPR
Trigger: TCTTGGACGCAGCGTCCCAGAAGATAGCAACCTTCACAGACATCGGCAACAGCCTGGCGCATGTGGAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000475524.1
ENST00000535094.7
CDS TCA 72 bp GGGGCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTTaGACAAGCCTGATGACGTCAGACACATCAATTTGG +
Preference number: 6 (lower is better)
Translates to: GAVAMAVASGVS*TSLMTSDTSIW
Trigger: CCAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS GCA 72 bp TCCTCCCTCTTCTTGCAGAAGAGCACTGCCTTCTCGTaGAGGAACAGGTGCCGCTGCATGGGCTTGAACCTG +
Preference number: 6 (lower is better)
Translates to: SSLFLQKSTAFS*RNRCRCMGLNL
Trigger: CAGGTTCAAGCCCATGCAGCGGCACCTGTTCCTGCACGAGAAGGCAGTGCTCTTCTGCAAGAAGAGGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000535094.7
CDS GCA 72 bp TGGATGTCGGCAGCACAGAGCGGGACGATGTCCTGGTaGATGATTTCATCTGGGCTGGCAGGGATGAGCTGT +
Preference number: 6 (lower is better)
Translates to: WMSAAQSGTMSW*MISSGLAGMSC
Trigger: ACAGCTCATCCCTGCCAGCCCAGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409954.6
CDS GCA 72 bp CGTCGTCCTCAGGTGCCTCCAGTGAGTGGGACGTTTTaGTCCAACCTAAGAGAGACAGACACCCGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: RRPQVPPVSGTF*SNLRETDTREG
Trigger: TCCCTCACGGGTGTCTGTCTCTCTTAGGTTGGAGCAAAACGTCCCACTCACTGGAGGCACCTGAGGACGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 72 bp CATACATCACGCCGGTCCTGGCATCTGAGGTGCCCGTaGTGGTCCACGTTAAGGATTCACTCGTGGTGGCAT +
Preference number: 6 (lower is better)
Translates to: HTSRRSWHLRCP*WSTLRIHSWWH
Trigger: ATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATGTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 72 bp CCGGGTGAGGAAAACAATGGGCGTGGACCCTGTTCCTaGAGATGTTCAGACACGAGTGCTCAGAATGGCCGC +
Preference number: 6 (lower is better)
Translates to: PGEENNGRGPCS*RCSDTSAQNGR
Trigger: GCGGCCATTCTGAGCACTCGTGTCTGAACATCTGCAGGAACAGGGTCCACGCCCATTGTTTTCCTCACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494043.1
CDS CCA 72 bp GCCCGGTGCTGGCTGGCTTCTCTACAAGCCTGCAGCTaGCTGGTCAGCACTTTCCGAATTTCATTCACCCAC +
Preference number: 6 (lower is better)
Translates to: ARCWLASLQACS*LVSTFRISFTH
Trigger: GTGGGTGAATGAAATTCGGAAAGTGCTGACCAGCCAGCTGCAGGCTTGTAGAGAAGCCAGCCAGCACCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000261963.11
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000439475.1
ENST00000453297.5
ENST00000535094.7
CDS CCA 72 bp AGGTGCCCGTGCTGGTCCACGTTAAGGATTCACTCGTaGTGGCATGGCTACGGTGCTGGGAGAAAATCCCCA +
Preference number: 6 (lower is better)
Translates to: RCPCWSTLRIHS*WHGYGAGRKSP
Trigger: TGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS CCA 72 bp TCTCGGATGCCAAGGGAAAGTCCTTGGAAAGGAGGGTaGCTACATGCGAGGCTGGGTTACTGGGGAAGGGAG +
Preference number: 6 (lower is better)
Translates to: SRMPRESPWKGG*LHARLGYWGRE
Trigger: CTCCCTTCCCCAGTAACCCAGCCTCGCATGTAGCCACCCTCCTTTCCAAGGACTTTCCCTTGGCATCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp TGTGCCTGGCACACAGCGGATGCTGCACAGATGTCATaGAACACGTTCCGTTGGGGAATGGGGACCCAGGAA +
Preference number: 6 (lower is better)
Translates to: CAWHTADAAQMS*NTFRWGMGTQE
Trigger: TTCCTGGGTCCCCATTCCCCAACGGAACGTGTTCCATGACATCTGTGCAGCATCCGCTGTGTGCCAGGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 72 bp AGGTCCCTCAGCAGGTGCTCCACATGCGCCAGGCTGTaGCCGATGTCTGTGAAGGTTGCTATCTTCTGGGAC +
Preference number: 6 (lower is better)
Translates to: RSLSRCSTCARL*PMSVKVAIFWD
Trigger: GTCCCAGAAGATAGCAACCTTCACAGACATCGGCAACAGCCTGGCGCATGTGGAGCACCTGCTGAGGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000475524.1
ENST00000535094.7
CDS CAA 72 bp TGGCACGTTTCAGGGTTTGAGACCATCTGCTTCCAATaGCTGGGCCACCCTGTGGGAGACCTCGATCCCCAG +
Preference number: 6 (lower is better)
Translates to: WHVSGFETICFQ*LGHPVGDLDPQ
Trigger: CTGGGGATCGAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CAA 90 bp CAAAGTGCCGGAGCTGCAGACACTGCTCCAGTTTCTGCTGATGCTTaGCCCAGAACTCATCGAAGGCAGCCTCGGTTTCGTTCAGCTGGG +
Preference number: 6 (lower is better)
Translates to: QSAGAADTAPVSADA*PRTHRRQPRFRSAG
Trigger: CCCAGCTGAACGAAACCGAGGCTGCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCAGTGTCTGCAGCTCCGGCACTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CAA 90 bp AGGACACCCCTGCAAACTTCCAGAATGCCTGGCACGTTTCAGGGTTaGAGACCATCTGCTTCCAATTGCTGGGCCACCCTGTGGGAGACC +
Preference number: 6 (lower is better)
Translates to: RTPLQTSRMPGTFQG*RPSASNCWATLWET
Trigger: GGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCAGGCATTCTGGAAGTTTGCAGGGGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CAA 90 bp TCTCTGCACACAGCCCCCGTCCTGCCTGGTCAGGACTGTTGTGCTTaGTGTAAGAGGAAGTGCATGTTCAATCCCACTGGGGAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: SLHTAPVLPGQDCCA*CKRKCMFNPTGEGR
Trigger: CCTCCCTTCCCCAGTGGGATTGAACATGCACTTCCTCTTACACAAAGCACAACAGTCCTGACCAGGCAGGACGGGGGCTGTGTGCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 72 bp CGCCTTGTCCTTCTTCTCTGTGTGCGCACACAGCACTaGGCTTGTCGACTGGACGTCATTGGGCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: RLVLLLCVRTQH*ACRLDVIGQLC
Trigger: ACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGAAGAAGGACAAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS TCA 72 bp CGCATGGTCACAAGAGACAGGTGCTCAGGACCCTGGTaGCTCTGGGCTTCGCCAACTCACAAGAAAGAACCC +
Preference number: 6 (lower is better)
Translates to: RMVTRDRCSGPW*LWASPTHKKEP
Trigger: GGGTTCTTTCTTGTGAGTTGGCGAAGCCCAGAGTCACCAGGGTCCTGAGCACCTGTCTCTTGTGACCATGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421756.5
CDS TCA 72 bp GATGCCAGCGTCCTGCAGGCACCTCGAGTCACAGATTaGGGCAGAACCATCTCTCCCGAGCTCAGTCATTTG +
Preference number: 6 (lower is better)
Translates to: DASVLQAPRVTD*GRTISPELSHL
Trigger: CAAATGACTGAGCTCGGGAGAGATGGTTCTGCCTCAATCTGTGACTCGAGGTGCCTGCAGGACGCTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469558.1
CDS TCA 72 bp TCTGGTGGGCCCCGCAAAGGCATCACCCTGGACAGGTaGCTTGGCTGTGAACCATCTCTGCTTCCTTTTCTG +
Preference number: 6 (lower is better)
Translates to: SGGPRKGITLDR*LGCEPSLLPFL
Trigger: CAGAAAAGGAAGCAGAGATGGTTCACAGCCAAGTCACCTGTCCAGGGTGATGCCTTTGCGGGGCCCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 72 bp CGAAGGACTGCAGCATCTGAGCCGTCTGCTTCACCATaGGGGCGAAACTTTCGATGGCCAGGCACACTCTAC +
Preference number: 6 (lower is better)
Translates to: RRTAASEPSASP*GRNFRWPGTLY
Trigger: GTAGAGTGTGCCTGGCCATCGAAAGTTTCGCCCTCATGGTGAAGCAGACGGCTCAGATGCTGCAGTCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475524.1
CDS TCA 72 bp TCCGTGCTTTCAGGTCTTATTTCCATGCTGCTTTGCTaGGGCCTTCCTTGGTACTCCCCGACTCGCCCGTCC +
Preference number: 6 (lower is better)
Translates to: SVLSGLISMLLC*GLPWYSPTRPS
Trigger: GGACGGGCGAGTCGGGGAGTACCAAGGAAGGCCTCAGCAAAGCAGCATGGAAATAAGACCTGAAAGCACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS GCA 72 bp CTCTGCGACAGCCACATCTGTGACAGAGACCACACTTaGGCGTTGTATAACGACAGCCTCCGTCCTCGGATG +
Preference number: 6 (lower is better)
Translates to: LCDSHICDRDHT*ALYNDSLRPRM
Trigger: CATCCGAGGACGGAGGCTGTCGTTATACAACGCGCAAGTGTGGTCTCTGTCACAGATGTGGCTGTCGCAGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
CDS GCA 72 bp CAGAATGCCTGGCACGTTTCAGGGTTTGAGACCATCTaGTTCCAATTGCTGGGCCACCCTGTGGGAGACCTC +
Preference number: 6 (lower is better)
Translates to: QNAWHVSGFETI*FQLLGHPVGDL
Trigger: GAGGTCTCCCACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCAGGCATTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 72 bp GGAAGGAATGGCAGGGCCTCCGCGACTTGTCCCCAGTaGTCAGAAGCAGCAGACTCCATGAACAAAATGCTG +
Preference number: 6 (lower is better)
Translates to: GRNGRASATCPQ*SEAADSMNKML
Trigger: CAGCATTTTGTTCATGGAGTCTGCTGCTTCTGAGCACTGGGGACAAGTCGCGGAGGCCCTGCCATTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486806.1
CDS CCA 72 bp TTCTCTGTGTGCGCACACAGCACTGAGCTTGTCGACTaGACGTCATTGGGCAGCTCTGTTTCAGCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: FSVCAHSTELVD*TSLGSSVSASS
Trigger: CGAGCTGGCTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 72 bp AGGCTGTTGCCGATGTCTGTGAAGGTTGCTATCTTCTaGGACGCTGCGTCCAAGATGGCTTTGACCTCCCGG +
Preference number: 6 (lower is better)
Translates to: RLLPMSVKVAIF*DAASKMALTSR
Trigger: CCGGGAGGTCAAAGCCATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTTCACAGACATCGGCAACAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 72 bp CTGCGGTGGAACACCTCCTCCATGCTTGCCTGCTTCTaGAAGACCTTTCGCACGTGCTCCATGAGATCTTGG +
Preference number: 6 (lower is better)
Translates to: LRWNTSSMLACF*KTFRTCSMRSW
Trigger: CCAAGATCTCATGGAGCACGTGCGAAAGGTCTTCCAGAAGCAGGCAAGCATGGAGGAGGTGTTCCACCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp TGCCCGTGCTGGTCCACGTTAAGGATTCACTCGTGGTaGCATGGCTACGGTGCTGGGAGAAAATCCCCAAGA +
Preference number: 6 (lower is better)
Translates to: CPCWSTLRIHSW*HGYGAGRKSPR
Trigger: TCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCACGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS CCA 72 bp CTGTCTGGTGTGAGGCTGACATTCTCAGCATCTTCCTaGAGGCTGGGACGAGCACATCAGATGAGAGACCCC +
Preference number: 6 (lower is better)
Translates to: LSGVRLTFSASS*RLGRAHQMRDP
Trigger: GGGGTCTCTCATCTGATGTGCTCGTCCCAGCCTCCAGGAAGATGCTGAGAATGTCAGCCTCACACCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397024.1
CDS CCA 72 bp CAAAACAGTCTTATGGCGCATACATCACGCCGGTCCTaGCATCTGAGGTGCCCGTGCTGGTCCACGTTAAGG +
Preference number: 6 (lower is better)
Translates to: QNSLMAHTSRRS*HLRCPCWSTLR
Trigger: CCTTAACGTGGACCAGCACGGGCACCTCAGATGCCAGGACCGGCGTGATGTATGCGCCATAAGACTGTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS CCA 72 bp TCCTGGATGTCGGCAGCACAGAGCGGGACGATGTCCTaGTGCATGATTTCATCCGTGTGCTTGGAAACCGCA +
Preference number: 6 (lower is better)
Translates to: SWMSAAQSGTMS*CMISSVCLETA
Trigger: TGCGGTTTCCAAGCACACGGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS CAA 72 bp GACAGCCACATCTGTGACAGAGACCACACTTGCGCGTaGTATAACGACAGCCTCCGTCCTCGGATGAGCCTG +
Preference number: 6 (lower is better)
Translates to: DSHICDRDHTCA*YNDSLRPRMSL
Trigger: CAGGCTCATCCGAGGACGGAGGCTGTCGTTATACAACGCGCAAGTGTGGTCTCTGTCACAGATGTGGCTGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
CDS CAA 72 bp AGGGGCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTCAGACACATCAATTTG +
Preference number: 6 (lower is better)
Translates to: RGCGHGRRLRCV*NKPDDVRHINL
Trigger: CAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442625.2
CDS CAA 72 bp CGATGCCAGCGTCCTGCAGGCACCTCGAGTCACAGATaGAGGCAGAACCATCTCTCCCGAGCTCAGTCATTT +
Preference number: 6 (lower is better)
Translates to: RCQRPAGTSSHR*RQNHLSRAQSF
Trigger: AAATGACTGAGCTCGGGAGAGATGGTTCTGCCTCAATCTGTGACTCGAGGTGCCTGCAGGACGCTGGCATCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469558.1
CDS CAA 72 bp AACAGGTGCTACACGTGCCTTTTCCACAAAGGGACCTaGGATGTGCCAGGCCACGGAGATGGAACCCAGCTG +
Preference number: 6 (lower is better)
Translates to: NRCYTCLFHKGT*DVPGHGDGTQL
Trigger: CAGCTGGGTTCCATCTCCGTGGCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGCACCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp GGCGTGACCCCTTATGAATGGCTCAGCGCCATCCCCTaGGTGACGGGTGAGTTCTCGCTCAGTAAGTTCACT +
Preference number: 6 (lower is better)
Translates to: GVTPYEWLSAIP*VTGEFSLSKFT
Trigger: AGTGAACTTACTGAGCGAGAACTCACCCGTCACCAAGGGGATGGCGCTGAGCCATTCATAAGGGGTCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp CCCTTCCGTGCTTTCAGGTCTTATTTCCATGCTGCTTaGCTGAGGCCTTCCTTGGTACTCCCCGACTCGCCC +
Preference number: 6 (lower is better)
Translates to: PFRAFRSYFHAA*LRPSLVLPDSP
Trigger: GGGCGAGTCGGGGAGTACCAAGGAAGGCCTCAGCAAAGCAGCATGGAAATAAGACCTGAAAGCACGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488765.1
CDS CAA 90 bp AGATGCCGAGACCTCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTCAGACACATCAATTTGGTGATCCGT +
Preference number: 6 (lower is better)
Translates to: RCRDLCGHGRRLRCV*NKPDDVRHINLVIR
Trigger: ACGGATCACCAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGAGGTCTCGGCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS CAA 90 bp CGTGCAGAATCTGCAAACAGACTCTCGGATGCCAAGGGAAAGTCCTaGGAAAGGAGGGTGGCTACATGCGAGGCTGGGTTACTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: RAESANRLSDAKGKS*ERRVATCEAGLLGK
Trigger: CTTCCCCAGTAACCCAGCCTCGCATGTAGCCACCCTCCTTTCCAAGGACTTTCCCTTGGCATCCGAGAGTCTGTTTGCAGATTCTGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 72 bp ACCTCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTTaGACAAGCCTGATGACGTCAGACACATCAATTTGG +
Preference number: 6 (lower is better)
Translates to: TSVAMAVASGVS*TSLMTSDTSIW
Trigger: CCAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS TCA 72 bp GAAGCCACTGAGTATGCTGTAACCCGCAGCGCTGCCTaGGCGGCGTCACTGTTTTGCAGAACAACAAAGCCT +
Preference number: 6 (lower is better)
Translates to: EATEYAVTRSAA*AASLFCRTTKP
Trigger: AGGCTTTGTTGTTCTGCAAAACAGTGACGCCGCTCAGGCAGCGCTGCGGGTTACAGCATACTCAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp CACATGCGCCAGGCTGTTGCCGATGTCTGTGAAGGTTaGTATCTTCTGGGACGCTGCGTCCAAGATGGCTTT +
Preference number: 6 (lower is better)
Translates to: HMRQAVADVCEG*YLLGRCVQDGF
Trigger: AAAGCCATCTTGGACGCAGCGTCCCAGAAGATAGCAACCTTCACAGACATCGGCAACAGCCTGGCGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000475524.1
ENST00000535094.7
CDS CCA 72 bp CTGCAAACAGACTCTCGGATGCCAAGGGAAAGTCCTTaGAAAGGAGGGTGGCTACATGCGAGGCTGGGTTAC +
Preference number: 6 (lower is better)
Translates to: LQTDSRMPRESP*KGGWLHARLGY
Trigger: GTAACCCAGCCTCGCATGTAGCCACCCTCCTTTCCAAGGACTTTCCCTTGGCATCCGAGAGTCTGTTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp GGAGCTGCAGACACTGCTCCAGTTTCTGCTGATGCTTaGCCCAGAACTCATCGAAGGCAGCCTCGGTTTCGT +
Preference number: 6 (lower is better)
Translates to: GAADTAPVSADA*PRTHRRQPRFR
Trigger: ACGAAACCGAGGCTGCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCAGTGTCTGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CAA 72 bp GACCTCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTCAGACACATCAATTTG +
Preference number: 6 (lower is better)
Translates to: DLCGHGRRLRCV*NKPDDVRHINL
Trigger: CAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397036.4
CDS CAA 90 bp ACTCTCTGCGACAGCCACATCTGTGACAGAGACCACACTTGCGCGTaGTATAACGACAGCCTCCGTCCTCGGATGAGCCTGGTAGTAGAA +
Preference number: 6 (lower is better)
Translates to: TLCDSHICDRDHTCA*YNDSLRPRMSLVVE
Trigger: TTCTACTACCAGGCTCATCCGAGGACGGAGGCTGTCGTTATACAACGCGCAAGTGTGGTCTCTGTCACAGATGTGGCTGTCGCAGAGAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS CAA 90 bp TTAAGTCTGGGCGTGACCCCTTATGAATGGCTCAGCGCCATCCCCTaGGTGACGGGTGAGTTCTCGCTCAGTAAGTTCACTGGAGATCTG +
Preference number: 6 (lower is better)
Translates to: LSLGVTPYEWLSAIP*VTGEFSLSKFTGDL
Trigger: CAGATCTCCAGTGAACTTACTGAGCGAGAACTCACCCGTCACCAAGGGGATGGCGCTGAGCCATTCATAAGGGGTCACGCCCAGACTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 72 bp TCATCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTTaGACAAGCCTGATGACGTCAGACACATCAATTTGG +
Preference number: 6 (lower is better)
Translates to: SSVAMAVASGVS*TSLMTSDTSIW
Trigger: CCAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS TCA 72 bp ATGGCTACGGTGCTGGGAGAAAATCCCCAAGACTTCTaGAGGTTCCCAAGCATCTGCTGGAAACGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: MATVLGENPQDF*RFPSICWKRER
Trigger: CCTCTCCCGTTTCCAGCAGATGCTTGGGAACCTTCAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS TCA 72 bp GACGCAGTCATCAATCGTGCATTTCAAGGCTCAGCCTaGCTTAATCTCACAGGCTCCACCTGGCAAGCGGAG +
Preference number: 6 (lower is better)
Translates to: DAVINRAFQGSA*LNLTGSTWQAE
Trigger: CTCCGCTTGCCAGGTGGAGCCTGTGAGATTAAGTCAGGCTGAGCCTTGAAATGCACGATTGATGACTGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464800.5
CDS TCA 72 bp AGACCGAGCCGGGAAGCAGTTTCTAAAGTGAATGACTaGAGCTCACTGAGAGGGCCTGACGCCCTTGACCTA +
Preference number: 6 (lower is better)
Translates to: RPSREAVSKVND*SSLRGPDALDL
Trigger: TAGGTCAAGGGCGTCAGGCCCTCTCAGTGAGCTTCAGTCATTCACTTTAGAAACTGCTTCCCGGCTCGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS TCA 72 bp GATCCCGGAGCTCTCTGGGTCCCAGTCCTCCTAGAGTaGAGGAGAGAAGAGCCCAGAATGACTAATTTCCAC +
Preference number: 6 (lower is better)
Translates to: DPGALWVPVLLE*RREEPRMTNFH
Trigger: GTGGAAATTAGTCATTCTGGGCTCTTCTCTCCTTCACTCTAGGAGGACTGGGACCCAGAGAGCTCCGGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GAGCTGCAGACACTGCTCCAGTTTCTGCTGATGCTTTaGCCAGAACTCATCGAAGGCAGCCTCGGTTTCGTT +
Preference number: 6 (lower is better)
Translates to: ELQTLLQFLLML*PELIEGSLGFV
Trigger: AACGAAACCGAGGCTGCCTTCGATGAGTTCTGGGCAAAGCATCAGCAGAAACTGGAGCAGTGTCTGCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS GCA 72 bp ATCTCACAGGCTCCACCTGGCAAGCGGAGACTTTTCTaGATTAAGCCAAAGTCAACTGGGTGGCACGGCTCA +
Preference number: 6 (lower is better)
Translates to: ISQAPPGKRRLF*IKPKSTGWHGS
Trigger: TGAGCCGTGCCACCCAGTTGACTTTGGCTTAATGCAGAAAAGTCTCCGCTTGCCAGGTGGAGCCTGTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464800.5
CDS GCA 72 bp ATTCAAAGCAGCCTTCTGCAGTGGGCACTAAGCACGTaGACGAGCATGGCGAGTCAGCGACTCCATTTCACA +
Preference number: 6 (lower is better)
Translates to: IQSSLLQWALST*TSMASQRLHFT
Trigger: TGTGAAATGGAGTCGCTGACTCGCCATGCTCGTGCACGTGCTTAGTGCCCACTGCAGAAGGCTGCTTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp AAGGCAGCGTGCAGAATCTGCAAACAGACTCTCGGATaGCAAGGGAAAGTCCTTGGAAAGGAGGGTGGCTAC +
Preference number: 6 (lower is better)
Translates to: KAACRICKQTLG*QGKVLGKEGGY
Trigger: GTAGCCACCCTCCTTTCCAAGGACTTTCCCTTGGCATCCGAGAGTCTGTTTGCAGATTCTGCACGCTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp TGCAGATGTTCAGACACGAGTGCTCAGAATGGCCGCTaGCGTGTGCGTGAGGCCATCACTCCTAAAACCAAT +
Preference number: 6 (lower is better)
Translates to: CRCSDTSAQNGR*RVREAITPKTN
Trigger: ATTGGTTTTAGGAGTGATGGCCTCACGCACACGGCAGCGGCCATTCTGAGCACTCGTGTCTGAACATCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494043.1
CDS GCA 72 bp TGGATGTCGGCAGCACAGAGCGGGACGATGTCCTGGTaGATGATTTCATCCGTGTGCTTGGAAACCGCATTT +
Preference number: 6 (lower is better)
Translates to: WMSAAQSGTMSW*MISSVCLETAF
Trigger: AAATGCGGTTTCCAAGCACACGGATGAAATCATGCACCAGGACATCGTCCCGCTCTGTGCTGCCGACATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS CCA 72 bp GTGCTGGTCCACGTTAAGGATTCACTCGTGGTGGCATaGCTACGGTGCTGGGAGAAAATCCCCAAGACTTCT +
Preference number: 6 (lower is better)
Translates to: VLVHVKDSLVVA*LRCWEKIPKTS
Trigger: AGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTGGACCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS CCA 72 bp GCAAGTCACATTGGGCTCCCTAAGAGTTCCTTCATCTaGGAAAACTCACACCCAGGCACCAGTGCCTTGGGA +
Preference number: 6 (lower is better)
Translates to: ASHIGLPKSSFI*ENSHPGTSALG
Trigger: TCCCAAGGCACTGGTGCCTGGGTGTGAGTTTTCCCAGATGAAGGAACTCTTAGGGAGCCCAATGTGACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp TGTCCTTCTTCTCTGTGTGCGCACACAGCACTGAGCTaGTCGACTGGACGTCATTGGGCAGCTCTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: CPSSLCAHTALS*STGRHWAALFQ
Trigger: CTGAAACAGAGCTGCCCAATGACGTCCAGTCGACAAGCTCAGTGCTGTGTGCGCACACAGAGAAGAAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000421756.5
ENST00000423251.1
ENST00000464800.5
ENST00000475524.1
ENST00000535094.7
CDS CAA 72 bp CTGCAAACTTCCAGAATGCCTGGCACGTTTCAGGGTTaGAGACCATCTGCTTCCAATTGCTGGGCCACCCTG +
Preference number: 6 (lower is better)
Translates to: LQTSRMPGTFQG*RPSASNCWATL
Trigger: CAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCAGGCATTCTGGAAGTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS CAA 72 bp GTGGGCCCCGCAAAGGCATCACCCTGGACAGGTGACTaGGCTGTGAACCATCTCTGCTTCCTTTTCTGTAAA +
Preference number: 6 (lower is better)
Translates to: VGPAKASPWTGD*AVNHLCFLFCK
Trigger: TTTACAGAAAAGGAAGCAGAGATGGTTCACAGCCAAGTCACCTGTCCAGGGTGATGCCTTTGCGGGGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp TGCAGGTGGGAAGCCGGCTGCCCACGAAATCCCTCAGAAAACCTCTaGGGAGAGCGATCCCCCATATTCATGATGCCATTTCTGCAATAC +
Preference number: 6 (lower is better)
Translates to: CRWEAGCPRNPSENL*GERSPIFMMPFLQY
Trigger: GTATTGCAGAAATGGCATCATGAATATGGGGGATCGCTCTCCCAAGAGGTTTTCTGAGGGATTTCGTGGGCAGCCGGCTTCCCACCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 72 bp TGCAAACTTCCAGAATGCCTGGCACGTTTCAGGGTTTaGGACCATCTGCTTCCAATTGCTGGGCCACCCTGT +
Preference number: 6 (lower is better)
Translates to: CKLPECLARFRV*DHLLPIAGPPC
Trigger: ACAGGGTGGCCCAGCAATTGGAAGCAGATGGTCTCAAACCCTGAAACGTGCCAGGCATTCTGGAAGTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS TCA 72 bp AACAGAGCCTGTCATCTTCCCGGGTTCATAAAGAGCTaGGCAGGACACCCCTGCAAACTTCCAGAATGCCTG +
Preference number: 6 (lower is better)
Translates to: NRACHLPGFIKS*AGHPCKLPECL
Trigger: CAGGCATTCTGGAAGTTTGCAGGGGTGTCCTGCTCAGCTCTTTATGAACCCGGGAAGATGACAGGCTCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469415.1
CDS GCA 72 bp CACGTTAAGGATTCACTCGTGGTGGCATGGCTACGGTaGTGGGAGAAAATCCCCAAGACTTCTGAAGGTTCC +
Preference number: 6 (lower is better)
Translates to: HVKDSLVVAWLR*WEKIPKTSEGS
Trigger: GGAACCTTCAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS GCA 72 bp ACCAGCCAATCCAAAGCAGAAACAACCACACGGGCATaGCTAAGGCAGGGGCTAGAATCGCTAACTTCCAAG +
Preference number: 6 (lower is better)
Translates to: TSQSKAETTTRA*LRQGLESLTSK
Trigger: CTTGGAAGTTAGCGATTCTAGCCCCTGCCTTAGGCATGCCCGTGTGGTTGTTTCTGCTTTGGATTGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 72 bp GTTCAGACACGAGTGCTCAGAATGGCCGCTGCCGTGTaGGTGAGGCCATCACTCCTAAAACCAATCCTAAAA +
Preference number: 6 (lower is better)
Translates to: VQTRVLRMAAAV*VRPSLLKPILK
Trigger: TTTTAGGATTGGTTTTAGGAGTGATGGCCTCACGCACACGGCAGCGGCCATTCTGAGCACTCGTGTCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494043.1
CDS CCA 72 bp TTGCCATCAAAAGGCATCTCAAGCCTGCTGACTTCTTaGTCTTACGTGCTGCTGACACAAACTCCCGCTGGG +
Preference number: 6 (lower is better)
Translates to: LPSKGISSLLTS*SYVLLTQTPAG
Trigger: CCCAGCGGGAGTTTGTGTCAGCAGCACGTAAGACCAAGAAGTCAGCAGGCTTGAGATGCCTTTTGATGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS CCA 72 bp TGTAAGAGGCATATTCAGTCCCGAGCATCTCAGACTTaGTGTTCGGAAACATATGGGCTGCTCTGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: CKRHIQSRASQT*CSETYGLLCLG
Trigger: CCCCAGGCAGAGCAGCCCATATGTTTCCGAACACCAAGTCTGAGATGCTCGGGACTGAATATGCCTCTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp TTCATCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTCAGACACATCAATTTG +
Preference number: 6 (lower is better)
Translates to: FICGHGRRLRCV*NKPDDVRHINL
Trigger: CAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS CAA 72 bp GAAGCCGGCTGCCCACGAAATCCCTCAGAAAACCTCTaGGGAGAGCGATCCCCCATATTCATGATGCCATTT +
Preference number: 6 (lower is better)
Translates to: EAGCPRNPSENL*GERSPIFMMPF
Trigger: AAATGGCATCATGAATATGGGGGATCGCTCTCCCAAGAGGTTTTCTGAGGGATTTCGTGGGCAGCCGGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp TATCCCTCCAGGCTTAGGGGGTCTGTTTTCCTTTCTTCCAGCTTCTaGATGTTCCTTGAGTTTCCTCTTGAGGGACTGGTGCTGGTCGGG +
Preference number: 6 (lower is better)
Translates to: YPSRLRGSVFLSSSF*MFLEFPLEGLVLVG
Trigger: CCCGACCAGCACCAGTCCCTCAAGAGGAAACTCAAGGAACATCAAGAAGCTGGAAGAAAGGAAAACAGACCCCCTAAGCCTGGAGGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000261963.11
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000413354.5
ENST00000421756.5
ENST00000439475.1
ENST00000453297.5
ENST00000535094.7
CDS CAA 90 bp GTGCATGATTTCATCTGTGGCCATGGCCGTCGCCTCCGGTGTGTCTaGAACAAGCCTGATGACGTCAGACACATCAATTTGGTGATCCGT +
Preference number: 6 (lower is better)
Translates to: VHDFICGHGRRLRCV*NKPDDVRHINLVIR
Trigger: ACGGATCACCAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAGGCGACGGCCATGGCCACAGATGAAATCATGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375608.7
CDS CAA 90 bp GCCGAGCTAATTGCCATCAAAAGGCATCTCAAGCCTGCTGACTTCTaGGTCTTACGTGCTGCTGACACAAACTCCCGCTGGGACGAAAGA +
Preference number: 6 (lower is better)
Translates to: AELIAIKRHLKPADF*VLRAADTNSRWDER
Trigger: TCTTTCGTCCCAGCGGGAGTTTGTGTCAGCAGCACGTAAGACCAAGAAGTCAGCAGGCTTGAGATGCCTTTTGATGGCAATTAGCTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS CAA 90 bp GTGGGTACAGGGAATCTTACTTCCCGTGTAGACCTGTGTGCTCCCTaGGGAGAGGCACAAAGTTACAGGTTATCCTCCAGTAACAGGTGC +
Preference number: 6 (lower is better)
Translates to: VGTGNLTSRVDLCAP*GEAQSYRLSSSNRC
Trigger: GCACCTGTTACTGGAGGATAACCTGTAACTTTGTGCCTCTCCCAAGGGAGCACACAGGTCTACACGGGAAGTAAGATTCCCTGTACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp CTCCGGTGTGTCTTGAACAAGCCTGATGACGTCAGACACATCAATTaGGTGATCCGTTTCCTCCTTTTTGGCCTCATTGGGCCGTTGTGG +
Preference number: 6 (lower is better)
Translates to: LRCVLNKPDDVRHIN*VIRFLLFGLIGPLW
Trigger: CCACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGATCACCAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGACACACCGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS CAA 90 bp CCAAAGGGAGTCGGGTCGCTCTTTACTTCATGCCGCTTGGCTTTTTaGTCAGGACTGGTAGGAGAAGCTTTGAGGTTAGCAAAACCCTGC +
Preference number: 6 (lower is better)
Translates to: PKGVGSLFTSCRLAF*SGLVGEALRLAKPC
Trigger: GCAGGGTTTTGCTAACCTCAAAGCTTCTCCTACCAGTCCTGACAAAAAAGCCAAGCGGCATGAAGTAAAGAGCGACCCGACTCCCTTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413354.5
CDS TCA 72 bp AAGTTTCAGGAATGTTCCAACTGGCTGCGTCTTCTGTaGCAGAGACCCAAACCACTCAGGGCTCGTGACCTT +
Preference number: 6 (lower is better)
Translates to: KFQECSNWLRLL*QRPKPLRARDL
Trigger: AAGGTCACGAGCCCTGAGTGGTTTGGGTCTCTGTCACAGAAGACGCAGCCAGTTGGAACATTCCTGAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GGACTGGTAGGAGAAGCTTTGAGGTTAGCAAAACCCTaGAGGGTAAAGCGCTTTCTGGAAAGCGCAGAGCTT +
Preference number: 6 (lower is better)
Translates to: GLVGEALRLAKP*RVKRFLESAEL
Trigger: AAGCTCTGCGCTTTCCAGAAAGCGCTTTACCCTGCAGGGTTTTGCTAACCTCAAAGCTTCTCCTACCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413354.5
CDS GCA 72 bp AGTTACAGGTTATCCTCCAGTAACAGGTGCTACACGTaGCTTTTCCACAAAGGGACCTTGGATGTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: SYRLSSSNRCYT*LFHKGTLDVPG
Trigger: GCCTGGCACATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGCACCTGTTACTGGAGGATAACCTGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GGGTACAGGGAATCTTACTTCCCGTGTAGACCTGTGTaGTCCCTTGGGAGAGGCACAAAGTTACAGGTTATC +
Preference number: 6 (lower is better)
Translates to: GYRESYFPCRPV*SLGRGTKLQVI
Trigger: GATAACCTGTAACTTTGTGCCTCTCCCAAGGGAGCACACAGGTCTACACGGGAAGTAAGATTCCCTGTACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp ACTTCACTGGGAGAATCTGACTTCACTGGGGTTTGGTaGTGGGGAATGCTTGGAGCAATTGTGCCATCACAG +
Preference number: 6 (lower is better)
Translates to: TSLGESDFTGVW*WGMLGAIVPSQ
Trigger: CTGTGATGGCACAATTGCTCCAAGCATTCCCCAGCACCAAACCCCAGTGAAGTCAGATTCTCCCAGTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp GTTAAGGATTCACTCGTGGTGGCATGGCTACGGTGCTaGGAGAAAATCCCCAAGACTTCTGAAGGTTCCCAA +
Preference number: 6 (lower is better)
Translates to: VKDSLVVAWLRC*EKIPKTSEGSQ
Trigger: TTGGGAACCTTCAGAAGTCTTGGGGATTTTCTCCCAGCACCGTAGCCATGCCACCACGAGTGAATCCTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397021.5
ENST00000469558.1
ENST00000480321.1
ENST00000494043.1
CDS CCA 72 bp ACCAGCTGGCTTTTTACTTTCATTTCACCCACTACCTaGGACAGAGTACGCCAGGCAATTACCCTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: TSWLFTFISPTT*DRVRQAITLLE
Trigger: CTCCAGGAGGGTAATTGCCTGGCGTACTCTGTCCCAGGTAGTGGGTGAAATGAAAGTAAAAAGCCAGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS CCA 72 bp CTGCAGGATGGAGATAAATTATGCAGTCTATGGGCGTaGCCGCTCTCTGTGAGCATCATTAACAAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LQDGDKLCSLWA*PLSVSIINKPG
Trigger: CCCTGGCTTGTTAATGATGCTCACAGAGAGCGGCCACGCCCATAGACTGCATAATTTATCTCCATCCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp GTCCCGAGCATCTCAGACTTGGTGTTCGGAAACATATaGGCTGCTCTGCCTGGGGAAATTGTTTGCAAGTCA +
Preference number: 6 (lower is better)
Translates to: VPSISDLVFGNI*AALPGEIVCKS
Trigger: TGACTTGCAAACAATTTCCCCAGGCAGAGCAGCCCATATGTTTCCGAACACCAAGTCTGAGATGCTCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp CTGACTTCACTGGGAGAATCTGACTTCACTGGGGTTTaGTGCTGGGGAATGCTTGGAGCAATTGTGCCATCA +
Preference number: 6 (lower is better)
Translates to: LTSLGESDFTGV*CWGMLGAIVPS
Trigger: TGATGGCACAATTGCTCCAAGCATTCCCCAGCACCAAACCCCAGTGAAGTCAGATTCTCCCAGTGAAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp GTCGGGTCGCTCTTTACTTCATGCCGCTTGGCTTTTTaGTCAGGACTGGTAGGAGAAGCTTTGCCCTTTTCG +
Preference number: 6 (lower is better)
Translates to: VGSLFTSCRLAF*SGLVGEALPFS
Trigger: CGAAAAGGGCAAAGCTTCTCCTACCAGTCCTGACAAAAAAGCCAAGCGGCATGAAGTAAAGAGCGACCCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397017.6
ENST00000420013.5
CDS CAA 72 bp ATTGCCATCAAAAGGCATCTCAAGCCTGCTGACTTCTaGGTCTTACGTGCTGCTGACACAAACTCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: IAIKRHLKPADF*VLRAADTNSRW
Trigger: CCAGCGGGAGTTTGTGTCAGCAGCACGTAAGACCAAGAAGTCAGCAGGCTTGAGATGCCTTTTGATGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423251.1
CDS CCA 72 bp TTCCATCCTCTCCAGAAAGCATCTTCCAACCAGTTCTaGGCAGTCAGTGTAGTTTTCCAGCTCCCTGAGGAA +
Preference number: 6 (lower is better)
Translates to: FHPLQKASSNQF*AVSVVFQLPEE
Trigger: TTCCTCAGGGAGCTGGAAAACTACACTGACTGCCCAGAACTGGTTGGAAGATGCTTTCTGGAGAGGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CCA 72 bp ATCCGTTTCCTCCTTTTTGGCCTCATTGGGCCGTTGTaGGGAAGAATAACTGTTGCTTCCAGGTCTCTTGCA +
Preference number: 6 (lower is better)
Translates to: IRFLLFGLIGPL*GRITVASRSLA
Trigger: TGCAAGAGACCTGGAAGCAACAGTTATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS CCA 72 bp AGACTTGGTGTTCGGAAACATATGGGCTGCTCTGCCTaGGGAAATTGTTTGCAAGTCACATTGGGCTCCCTA +
Preference number: 6 (lower is better)
Translates to: RLGVRKHMGCSA*GNCLQVTLGSL
Trigger: TAGGGAGCCCAATGTGACTTGCAAACAATTTCCCCAGGCAGAGCAGCCCATATGTTTCCGAACACCAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp GTGATCCGTTTCCTCCTTTTTGGCCTCATTGGGCCGTaGTGGGGAAGAATAACTGTTGCTTCCAGGTCTCTT +
Preference number: 6 (lower is better)
Translates to: VIRFLLFGLIGP*WGRITVASRSL
Trigger: AAGAGACCTGGAAGCAACAGTTATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS CAA 72 bp GTCGGGTCGCTCTTTACTTCATGCCGCTTGGCTTTTTaGTCAGGACTGGTAGGAGAAGCTTTGAGGTTAGCA +
Preference number: 6 (lower is better)
Translates to: VGSLFTSCRLAF*SGLVGEALRLA
Trigger: TGCTAACCTCAAAGCTTCTCCTACCAGTCCTGACAAAAAAGCCAAGCGGCATGAAGTAAAGAGCGACCCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413354.5
CDS CAA 72 bp TTTCTCAGCCTAACACCAACCACCTCGAGTCACAGATaGAGGCAGAACCATCTCTCCCGAGCTCAGTCATTT +
Preference number: 6 (lower is better)
Translates to: FLSLTPTTSSHR*RQNHLSRAQSF
Trigger: AAATGACTGAGCTCGGGAGAGATGGTTCTGCCTCAATCTGTGACTCGAGGTGGTTGGTGTTAGGCTGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp GGCTGCTCTGCCTGGGGAAATTGTTTGCAAGTCACATaGGGCTCCCTAAGAGTTCCTTCATCTGGGAAAACT +
Preference number: 6 (lower is better)
Translates to: GCSAWGNCLQVT*GSLRVPSSGKT
Trigger: AGTTTTCCCAGATGAAGGAACTCTTAGGGAGCCCAATGTGACTTGCAAACAATTTCCCCAGGCAGAGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp AAACATATGGGCTGCTCTGCCTGGGGAAATTGTTTGCAAGTCACATaGGGCTCCCTAAGAGTTCCTTCATCTGGGAAAACTCACACCCAG +
Preference number: 6 (lower is better)
Translates to: KHMGCSAWGNCLQVT*GSLRVPSSGKTHTQ
Trigger: CTGGGTGTGAGTTTTCCCAGATGAAGGAACTCTTAGGGAGCCCAATGTGACTTGCAAACAATTTCCCCAGGCAGAGCAGCCCATATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp CTTGGTGTTCGGAAACATATGGGCTGCTCTGCCTGGGGAAATTGTTaGCAAGTCACATTGGGCTCCCTAAGAGTTCCTTCATCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: LGVRKHMGCSAWGNC*QVTLGSLRVPSSGK
Trigger: TTTCCCAGATGAAGGAACTCTTAGGGAGCCCAATGTGACTTGCAAACAATTTCCCCAGGCAGAGCAGCCCATATGTTTCCGAACACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 72 bp CCACAACCCTCTCCTTGTAACAGGACCTTTCTATGCTaGACTTTGTCCCCTAAAATCTGCATGAGGGACCAG +
Preference number: 6 (lower is better)
Translates to: PQPSPCNRTFLC*TLSPKICMRDQ
Trigger: CTGGTCCCTCATGCAGATTTTAGGGGACAAAGTTCAGCATAGAAAGGTCCTGTTACAAGGAGAGGGTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433807.5
CDS TCA 72 bp GATGCAGGTGCTAAGCCTGTGCAGCCTGCAGAACTGTaGGCCAATTACGCCTCTTTCTTTATCAATTACCCA +
Preference number: 6 (lower is better)
Translates to: DAGAKPVQPAEL*ANYASFFINYP
Trigger: TGGGTAATTGATAAAGAAAGAGGCGTAATTGGCTCACAGTTCTGCAGGCTGCACAGGCTTAGCACCTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp GAGGCACAAAGTTACAGGTTATCCTCCAGTAACAGGTaGTACACGTGCCTTTTCCACAAAGGGACCTTGGAT +
Preference number: 6 (lower is better)
Translates to: EAQSYRLSSSNR*YTCLFHKGTLD
Trigger: ATCCAAGGTCCCTTTGTGGAAAAGGCACGTGTAGCACCTGTTACTGGAGGATAACCTGTAACTTTGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp CAATTTGGTGATCCGTTTCCTCCTTTTTGGCCTCATTaGGCCGTTGTGGGGAAGAATAACTGTTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: QFGDPFPPFWPH*AVVGKNNCCFQ
Trigger: CTGGAAGCAACAGTTATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGATCACCAAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS CCA 72 bp AGAACCTGCTCTCATCTACGGAAGGGCAGGCACTTTTaGTGTGTTCTTATTTCTCAGCCTAACACCAACCAC +
Preference number: 6 (lower is better)
Translates to: RTCSHLRKGRHF*CVLISQPNTNH
Trigger: GTGGTTGGTGTTAGGCTGAGAAATAAGAACACACCAAAAGTGCCTGCCCTTCCGTAGATGAGAGCAGGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp ATCAATTTGGTGATCCGTTTCCTCCTTTTTGGCCTCATTGGGCCGTaGTGGGGAAGAATAACTGTTGCTTCCAGGTCTCTTGCACAGGAT +
Preference number: 6 (lower is better)
Translates to: INLVIRFLLFGLIGP*WGRITVASRSLAQD
Trigger: ATCCTGTGCAAGAGACCTGGAAGCAACAGTTATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGATCACCAAATTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS CAA 90 bp GTGTTCTTATTTCTCAGCCTAACACCAACCACCTCGAGTCACAGATaGAGGCAGAACCATCTCTCCCGAGCTCAGTCATTTGCTATTCCA +
Preference number: 6 (lower is better)
Translates to: VFLFLSLTPTTSSHR*RQNHLSRAQSFAIP
Trigger: TGGAATAGCAAATGACTGAGCTCGGGAGAGATGGTTCTGCCTCAATCTGTGACTCGAGGTGGTTGGTGTTAGGCTGAGAAATAAGAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 90 bp CCGGCCTGCCTGTGTGGGGCTTCCACTCACTCTACGTTTAAATCTTaGTGTTACATTGTAATGGGAACACCAGTATCACAAATAGGCATC +
Preference number: 6 (lower is better)
Translates to: PACLCGASTHSTFKS*CYIVMGTPVSQIGI
Trigger: GATGCCTATTTGTGATACTGGTGTTCCCATTACAATGTAACACAAAGATTTAAACGTAGAGTGAGTGGAAGCCCCACACAGGCAGGCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CCA 72 bp CAGACACATCAATTTGGTGATCCGTTTCCTCCTTTTTaGCCTCATTGGGCCGTTGTGGGGAAGAATAACTGT +
Preference number: 6 (lower is better)
Translates to: QTHQFGDPFPPF*PHWAVVGKNNC
Trigger: ACAGTTATTCTTCCCCACAACGGCCCAATGAGGCCAAAAAGGAGGAAACGGATCACCAAATTGATGTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS CAA 72 bp GTCTTGAACAAGCCTGATGACGTCAGACACATCAATTaGGTGATCCGTTTCCTCCTTTTTGGCCTCATTGGG +
Preference number: 6 (lower is better)
Translates to: VLNKPDDVRHIN*VIRFLLFGLIG
Trigger: CCCAATGAGGCCAAAAAGGAGGAAACGGATCACCAAATTGATGTGTCTGACGTCATCAGGCTTGTTCAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375608.7
ENST00000397036.4
ENST00000442625.2
CDS TCA 72 bp TTGAGTCTGAGCACTTTGACGACTTTTTCTGAACTGTaGGACACAGTGGGTACAGGGAATCTTACTTCCCGT +
Preference number: 6 (lower is better)
Translates to: LSLSTLTTFSEL*DTVGTGNLTSR
Trigger: ACGGGAAGTAAGATTCCCTGTACCCACTGTGTCTCACAGTTCAGAAAAAGTCGTCAAAGTGCTCAGACTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS TCA 72 bp ATAAATTATGCAGTCTATGGGCGTGGCCGCTCTCTGTaGGCATCATTAACAAGCCAGGGATTTATATCGGGT +
Preference number: 6 (lower is better)
Translates to: INYAVYGRGRSL*ASLTSQGFISG
Trigger: ACCCGATATAAATCCCTGGCTTGTTAATGATGCTCACAGAGAGCGGCCACGCCCATAGACTGCATAATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp ATTGAGGCAGAACCATCTCTCCCGAGCTCAGTCATTTaGTATTCCACAGTAAGAGCCGAGTCATTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: IEAEPSLPSSVI*YSTVRAESFSF
Trigger: AAAGGAAAATGACTCGGCTCTTACTGTGGAATAGCAAATGACTGAGCTCGGGAGAGATGGTTCTGCCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469558.1
ENST00000480321.1
CDS GCA 72 bp ATGAAAATCAGAATTCTGCAGGATGGAGATAAATTATaGAGTCTATGGGCGTGGCCGCTCTCTGTGAGCATC +
Preference number: 6 (lower is better)
Translates to: MKIRILQDGDKL*SLWAWPLSVSI
Trigger: GATGCTCACAGAGAGCGGCCACGCCCATAGACTGCATAATTTATCTCCATCCTGCAGAATTCTGATTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS GCA 72 bp AACCCTCCCCAAGTTCAAATCACCTTCCTTAAGGTCTaGTCCAAGCCACACCTATCCAGCTTGACATTATAT +
Preference number: 6 (lower is better)
Translates to: NPPQVQITFLKV*SKPHLSSLTLY
Trigger: ATATAATGTCAAGCTGGATAGGTGTGGCTTGGAGCAGACCTTAAGGAAGGTGATTTGAACTTGGGGAGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494043.1
CDS GCA 72 bp ATTTCATCCGTGTGCTTGGAAACCGCATTTAATCTCTaGACCATTTCTTCCAAGGCCATCTCTTCAGTCCTC +
Preference number: 6 (lower is better)
Translates to: ISSVCLETAFNL*TISSKAISSVL
Trigger: GAGGACTGAAGAGATGGCCTTGGAAGAAATGGTGCAGAGATTAAATGCGGTTTCCAAGCACACGGATGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535094.7
CDS CCA 72 bp AGAATTCTGCAGGATGGAGATAAATTATGCAGTCTATaGGCGTGGCCGCTCTCTGTGAGCATCATTAACAAG +
Preference number: 6 (lower is better)
Translates to: RILQDGDKLCSL*AWPLSVSIINK
Trigger: CTTGTTAATGATGCTCACAGAGAGCGGCCACGCCCATAGACTGCATAATTTATCTCCATCCTGCAGAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480321.1
CDS CAA 72 bp TTCCAAACAAAACATCCTTCTTGTTGTGAAGGCCTGTaGACAGGAGGTGAGCCATCAGTGGGTTATCCATCT +
Preference number: 6 (lower is better)
Translates to: FQTKHPSCCEGL*TGGEPSVGYPS
Trigger: AGATGGATAACCCACTGATGGCTCACCTCCTGTCAACAGGCCTTCACAACAAGAAGGATGTTTTGTTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397017.6
ENST00000397030.5
ENST00000421756.5
ENST00000535094.7
CDS CAA 72 bp ATTATGACCGGCACCTTCATCTTAAAGTCATCTCTATaGAATTTGAAAGCGATGTCGGAGAGAGTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: IMTGTFILKSSL*NLKAMSERVLW
Trigger: CCAAAGGACTCTCTCCGACATCGCTTTCAAATTCAATAGAGATGACTTTAAGATGAAGGTGCCGGTCATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000375597.8
ENST00000375604.6
ENST00000375608.7
ENST00000397030.5
ENST00000409954.6
ENST00000421756.5
ENST00000423251.1
ENST00000535094.7